1. Field of the Invention
The present invention relates to a biosensor that has a surface with a sample region and/or a reference region which were created in part by using an aerosol jet direct write technique. In one embodiment, the biosensor is incorporated within a well of a microplate.
2. Description of Related Art
Today a biosensor and an optical label independent detection (LID) interrogation system can be used to enable the detection of a chemical/biomolecular binding event that takes place at or near the biosensor's surface. In particular, the biosensor and the optical interrogation system can be used so that changes in a refractive index/optical response of the biosensor can be measured which in turn enables a chemical/biomolecular binding event to be detected at or near the biosensor's surface. The biosensor along with a various optical interrogation systems have been used to detect a wide-variety of chemical/biomolecular binding events including, for example, protein-protein interactions and protein-small molecule interactions.
To properly conduct this type of high sensitivity measurement, it is important that problematical factors (e.g. temperature, solvent effects, bulk index of refraction changes, and nonspecific binding) which can lead to spurious changes in the measured refractive index/optical response be controlled and/or referenced out. Several different methods that can be used to reference out these problematical factors have been discussed in a co-assigned U.S. patent application Ser. No. 11/027,509 filed on Dec. 29, 2004 and entitled “Method for Creating a Reference Region and a Sample Region on a Biosensor and the Resulting Biosensor”. The contents of this document are incorporated by reference herein.
U.S. patent application Ser. No. 11/027,509 discloses several different methods for configuring a biosensor such that the aforementioned problematical factors can be referenced out when the biosensor is interrogated by an optical interrogation system. One of these methods for configuring the biosensor includes using a pin printing deposition technique to create a reference region on a reactive region of the biosensor's surface. This method includes the steps of coating the surface of the biosensor with a reactive agent and then using the pin printing deposition technique to deposit a blocking/deactivating agent on a predefined area of the reactive surface on the biosensor. Upon completion of these steps, the biosensor has a reference region (exposed blocking/deactivating agent) and a sample region (exposed reactive agent). Thus, when an assay is conducted and the biosensor is interrogated, a sample signal can be obtained from the sample region (which has thereon both an immobilized target molecule and a solution of a chemical/biochemical compound) that is used to detect a chemical/biomolecular binding event. And, a reference signal can be obtained from the reference region (which has thereon the chemical/biochemical compound solution but not the immobilized target molecule) that is used to detect spurious changes which could adversely affect the detection of the chemical/biomolecular binding event. Then, a “corrected” sample signal can be obtained by subtracting the reference signal from the sample signal. The “corrected” sample signal indicates the measured refractive index/optical response associated with the sample region where the problematical factors which cause spurious changes have been referenced-out.
This particular pin printing deposition technique has many advantages but it also has many disadvantages some of which are as follows:
1.The pin printing deposition technique uses a relatively large volume of ink (deactivating agent) on the biosensor, several nL per strike.
2. Since the printed spots remain fluid for tens of seconds before solvent evaporation, this allows the printed spots to merge and form the reference region. However, if there is too much liquid then this allows the printed reference region to spread, deform and de-wet which negatively affects the uniformity/definition of the deposited feature, increases the noise in the assay response, and requires the optical interrogation system to accommodate reference and sample regions which have varying sizes. In addition, the spreading of the printed spots also results in wide transition bands between the reference and sample regions, which wastes valuable space on the biosensor. Moreover, the excess unevaporated ink may spread or contaminate the signal/sample region while the biosensor/microplate is being stored.
3. The diameter of the printed spots are on the order of hundreds of microns, which makes it difficult to create complicated features such as checker boards with sub-millimeter dimensions.
4. The diameter of the printed spot does not necessarily remain constant during spotting. And, if the spot becomes too small, then the printed spots do not merge. To solve this problem, one might have to re-ink the pins before preparing a new reference region. This increases cycle times.
As can be seen, there is a need for a new deposition technique that can be used to prepare a biosensor which has a surface with at least one reference region and at least one sample region. This need and other needs are satisfied by the deposition device and the method of the present invention.
A method and deposition device are described herein that use an aerosol jet direct write technique to create non-binding reference region(s) and/or binding sample region(s) within a single well or multiple wells of a microplate, or on a single or multiple biosensors of an unassembled bottom insert. In one embodiment, the aerosol jet direct write technique enables a faster deposition of blocker/deactivating solution on a reactive surface, at lower volumes with higher positional placement accuracy, greater reference pad uniformity, and a wider range of ink formulations than is possible when using a pin printing deposition technique.
A more complete understanding of the present invention may be obtained by reference to the following detailed description when taken in conjunction with the accompanying drawings wherein:
Referring to
The contents of these documents are incorporated by reference herein.
The deposition head 120 which is connected to the atomizing chamber 118 (and in particular to the outlet tube 136) receives the flowing carrier gas 132/atomized deactivating agent 108. The deposition head 120 has a passageway 140 through which a sheath gas 138 is injected such that it flows around the atomized deactivating agent 108 and the carrier gas 132. The sheath gas 138 helps to collimate and focus the atomized deactivating agent 108/carrier gas 132 by forming a jacket around the atomized deactivating agent 108/carrier gas 132.
The nozzle 122 which is connected to the deposition head 120 directs the flowing sheath gas 138 and the flowing carrier gas 132/atomized deactivating agent 108 towards a predetermined area 102 (reference region 102) on top of the reactive surface 110/112 of the biosensor 106 (note the drawing is not to scale). In one scenario, the deposition device 100 remains stationary while the nozzle 122 deposits the atomized deactivating agent 108 on predefined area(s) 102 of the biosensor 106 which is moved back-and-forth by a platform 144. The processor 126 is programmed to control the back-and-forth movement of the platform 144. For instance, the processor 126 can implement a computer-aided design (CAD) created tool path to control the back-and-forth movement of the platform 144 The processor 126 is also programmed to control the movement of the shuttering mechanism 124 to permit or block the deposition of the deactivating agent 108 so it is deposited only on the predefined area which is to become the reference region 102. In another scenario, the deposition device 100 can be moved while the nozzle 122 deposits the atomized deactivating agent 108 on the predefined area(s) of a stationary biosensor 106. Upon completion of either scenario, the biosensor 106 has a reference region 102 (exposed blocking/deactivating agent 108) and a sample region 104 (exposed active agent 110).
In an alternative embodiment, the deposition device 100 can use the aerosol jet direct write technique to create one or more reference regions 102 by depositing a deactivating agent 108 on one or more predetermined areas of a non-reactive surface 112 (see step 202b in
At this point, when an assay is conducted and the biosensor 106 is interrogated, a sample signal can be obtained from the sample region 104 (which has thereon both an immobilized target molecule and a solution of a chemical/biochemical compound) that is used to detect a chemical/biomolecular binding event (or in an alternative embodiment a cell based assay can be performed). And, a reference signal can be obtained from the reference region 142 (which has thereon the chemical/biochemical compound solution but not the immobilized target molecule) that is used to detect spurious changes which could adversely affect the detection of the chemical/biomolecular binding event. Then, a “corrected” sample signal can be obtained by subtracting the reference signal from the sample signal. The “corrected” sample signal indicates the measured refractive index/optical response associated with the sample region 104 where the problematical factors which cause spurious changes have been referenced-out. An optical interrogation system which can be used to interrogate the biosensor 106 is disclosed in co-assigned U.S. patent application Ser. No. 11/027,547 (filed Dec. 29, 2004) and U.S. Patent Application Ser. No. 60/701,445 (filed Jul. 20, 2005). The contents of these documents are incorporated by reference herein.
An exemplary deposition device 100 which could be used in this particular application is manufactured by Optomec, Inc. and is sold under the brand name of The Maskless Meso-Scale Material Deposition System™ (M3D™) This particular deposition device 100 when used in accordance with method 200a (for example) has the many capabilities/advantages some of which are as follows:
1. The aerosol jet direct write technique consumes 100 times less deactivating agent 108 than the known pin printing deposition technique.
2. The deposited deactivating agent 108 dries 10-100 times more quickly than a deactivating agent deposited by the pin printing deposition technique. Thus, the reference region 102 created by the aerosol jet direct write technique has an improved feature definition/uniformity.
3. The thicknesses of the deposited deactivating agent 108, after solvent evaporation, can be varied from 1 nm-3000000 nm, with minimal impact on feature uniformity. And, the deposited deactivating agent 108 can have a droplet size which is 1-25 μm in diameter and have a volume which is approximately 10-15000 fL.
4.The aerosol jet direct write technique can create reference region(s) 102 using inks based on a variety of buffers and/or solvents with a minimal variation in uniformity or definition (so long as the buffers can be atomized). This technique can also form small reference regions 102 on biosensors 102 in a 384-well microplate format, without the need for adding spreading agents or surfactants, like di-methyl sulfoxide (DMSO)(see
5. The width of the deposited deactivating agent 108 can be as narrow as 10 μm. Thus, the aerosol jet direct write technique can create reference region(s) 102 a few hundred microns in dimension, with abutting or overlapping lines.
6. The aerosol jet direct write technique is non-contact. Thus, it is far less likely to damage or physically modify the biosensor 106 when compared to the pin printing deposition technique.
7. The quantity of ink applied can be controlled so that there is much less likelihood of spreading during microplate/biosensor storage.
Referring to
One slide 304 was then placed under the deposition system 100 (in particular The Maskless Meso-Scale Material Deposition System™ (M3D™)) which used the aerosol jet direct write technique to deposit O,O′-bis(2-aminopropyl)polyethylene glycol 1900 (PEG1900DA) (deactivating agent 108) dissolved in filtered 100 mM Borate Buffer onto a predefined area 102 (reference region 102) of the slide. In this case, the deposition system 100 deposited the PEG1900DA (deactivating agent 108) by raster filling overlapping lines (˜50-150 μm wide) at a 25 μm pitch. Another slide 302 was placed under a device which used the known printing technique to deposit PEG1900DA (deactivating agent 108) dissolved in filtered 100 mM Borate Buffer onto a predefined area 102 (reference region 102) of the slide.
Next, Cy3-Streptavidin was immobilized on the exposed reactive surface 104 of the printed slides 302 and 304 by soaking them in 50 μg/ml Cy3-Streptavidin and a PBS buffer, and then washing them in an ethanolamine solution (200 mM in borate buffer). The reference region 102 which is coated with the PEG1900DA (deactivating agent 108) does not permit the binding or immobilization of the Cy3-Streptavidin. Thereafter, a biotin solution was added to the slides 302 and 304.
The slides 302 and 304 were then imaged in an Axon GenePix 4000B fluorescence scanner.
The pin printed reference region 102 shown in
The photo shown in
Referring to
One microplate was then placed under the deposition system 100 (in particular The Maskless Meso-Scale Material Deposition Systems (M3D™)) which used the aerosol jet direct write technique to deposit PEG1900DA (deactivating agent 108) dissolved in a borate buffer onto a predefined area 102 (reference region 102) of one of the biosensors 106. In this case, the deposition system 100 deposited the PEG1900DA (deactivating agent 108) by raster filling overlapping lines (˜50-150 μm wide) at a 25 μm pitch. Another microplate was then placed under a device which used the known printing technique to deposit PEG1900DA (deactivating agent 108) dissolved in a borate buffer onto a predefined area 102 (reference region 102) of one of the biosensors 106.
Next, streptavidin was immobilized on the reactive surface 104 of the biosensors 106 within the microplates by exposing them to a solution of 100 μM Streptavidin in borate buffer (100 mM, pH9) for 20 minutes, followed by a PBS buffer wash, a block/wash with ethanolamine (200 mM in borate buffer, pH9), and then an additional wash with PBS buffers. Then, the microplates were incubated for 1 hour in a solution of PBS located with the wells. The reference region 102 which is coated with the PEG1900DA (deactivating agent 108) does not permit the binding or immobilization of the Streptavidin.
An optical interrogation system (in particular a Corning Epic™ reader instrument) interrogated the biosensors 106 within the microplates where 2D scans were performed before and after a biotin solution was added to each of the wells.
In contrast,
The graphs shown in
Referring to
Referring to
As can be seen, the reference region 102 had defined features and a uniform coating when the 384-well microplate was prepared using the new aerosol jet direct write technique where the PEG1900DA (deactivating agent 108) had been dissolved in 100 mM borate (see
The graph/scan shown in FIGS. 6G-GH respectively illustrate the intra-well referenced time trace and 2D binding map for an assay performed with a biosensor 106 that had a reference region 102 (PEG1900DA/100 mM borate) which was created by the aerosol jet direct write technique. And, the graph/scan shown in
Referring to
The bottom insert was then placed under the deposition system 100 (in particular The Maskless Meso-Scale Material Deposition System™ (M3D™)) which used the new aerosol jet direct write technique to deposit PEG1900DA (deactivating agent 108) dissolved in a borate buffer onto a predefined area 102 (reference region 102) of each biosensor 106. In particular, the deposition system 100 deposited the PEG1900DA (deactivating agent 108) by raster filling overlapping lines (˜50-150 μm wide) at a 25 μm pitch. In this experiment, the deposition device 100 was able to create reference regions 102 that covered exactly half of the biosensors 106 because there was no physical limitation associated with the presence of the well's walls.
As can be seen in
As can be seen, all of these experiments used EMA as the active agent 110 and PEG1900DA as the deactivating agent 108. However, the EMA agent 110 and the PEG1900DA agent 108 are not the only agents which can be used. Examples of different active agents 110 that could be used include, but are not limited to, the agents that are present anhydride groups, active esters, maleimide groups, epoxides, aldehydes, isocyanates, isothiocyanates, sulfonyl chlorides, carbonates, imidoesters, or alkyl halides.) And, examples of different deactivating agents 108 that could be used include, but are not limited to, ethanolamine (EA), ethylenediamine (EDA), tris hydroxymethylaminoethane (tris), polyethylene glycol amines or diamines, or non-amine containing reagents.
Although multiple embodiments of the present invention have been illustrated in the accompanying Drawings and described in the foregoing Detailed Description, it should be understood that the invention is not limited to the disclosed embodiments, but is capable of numerous rearrangements, modifications and substitutions without departing from the spirit of the invention as set forth and defined by the following claims.