Patent Application
20230054458
The present application claims priority to the Chinese Patent Application (Application No. CN201911273041.7) filed on Dec. 12, 2019 and the Chinese Patent Application (Application No. CN202011060513.3) filed on Sep. 30, 2020.
The present disclosure relates to an anti-claudin antibody-drug conjugate, and in particular to an anti-claudin18.2 antibody-exatecan analog conjugate, a preparation method therefor, a pharmaceutical composition comprising the antibody-drug conjugate and use thereof in preparing a medicament for treating a claudin18.2-mediated disease or condition, particularly use in preparing an anti-cancer medicament.
The statement herein merely provide background information related to the present disclosure and may not necessarily constitute the prior art.
Claudin-18 (CLDN18), a protein encoded by the claudin18 gene in humans, belongs to the cellular tight-junction protein family, and can control the flowing of molecules between layer cells. The claudin protein comprises four transmembrane regions and two extracellular loops in its structure, with its N-terminus and C-terminus in the cytoplasm. There are two splice variants of claudin-18, claudin 18.1 and claudin 18.2, which differ in sequence by eight amino acids in the first extracellular loops. Claudin 18.1 and claudin 18.2 are different in terms of expression distribution. Claudin 18.1 is selectively expressed in normal lung cells, while the expression of claudin 18.2 is highly restricted in normal cells, but it is frequently ectopically activated and overexpressed in a variety of tumors (e.g., gastric cancer, lung cancer and pancreatic cancer). Claudin18.2 is considered a potential therapeutic target for gastric cancer and other types of cancer, and the discovery of the target also provides a new option for the treatment of gastric cancer.
An antibody-drug conjugate (ADC) links a monoclonal antibody or an antibody fragment to a biologically active cytotoxin by a stable chemical linker compound, fully exploiting the binding specificity of the antibody to surface antigens of normal cells and tumor cells and the high-efficiency of the cytotoxic substance, and also avoiding the former's disadvantage of having a poor therapeutic effect, the latter's disadvantage of having serious toxic side effects, and the like. This means that the antibody-drug conjugate can bind to tumor cells more precisely and has a reduced effect on normal cells compared to conventional chemotherapeutic drugs in the past.
At present, some claudin18.2-targeted antibodies and ADC drugs have been reported in patents such as WO2020200196A1, WO2016166122 and WO2016165762. However, there is still a need to develop more effective and safer anti-claudin18.2 antibody-drug conjugates for better use in the treatment of claudin18.2-associated tumors.
The present disclosure relates to ADCs of anti-claudin18.2 antibodies and use thereof and provides an ADC drug in which an anti-claudin18.2 antibody or an antigen-binding fragment is conjugated with an exatecan analog, a cytotoxic substance. Accordingly, the present disclosure is intended to provide a ligand-drug conjugate of general formula (Pc-L-Y-D) or a pharmaceutically acceptable salt thereof:
wherein:
Y is selected from the group consisting of —O—(CRaRb)m—CR1R2—C(O)—, —O—CR1R2—(CRaRb), —O—CR1R2—, —NH—(CRaRb)m—CR1R2—C(O)— and —S—(CRaRb)m—CR1R2—C(O)—;
Ra and Rb are identical or different and are each independently selected from the group consisting of hydrogen, deuterium, halogen, alkyl, haloalkyl, deuterated alkyl, alkoxy, hydroxy, amino, cyano, nitro, hydroxyalkyl, cycloalkyl and heterocyclyl; or, Ra and Rb, together with carbon atoms connected thereto, form cycloalkyl or heterocyclyl;
R1 is selected from the group consisting of halogen, haloalkyl, deuterated alkyl, cycloalkyl, cycloalkylalkyl, alkoxyalkyl, heterocyclyl, aryl and heteroaryl; R2 is selected from the group consisting of hydrogen, halogen, haloalkyl, deuterated alkyl, cycloalkyl, cycloalkylalkyl, alkoxyalkyl, heterocyclyl, aryl and heteroaryl; or, R1 and R2, together with carbon atoms connected thereto, form cycloalkyl or heterocyclyl;
or, Ra and R2, together with carbon atoms connected thereto, form cycloalkyl or heterocyclyl;
m is an integer from 0 to 4;
n is a decimal or an integer from 1 to 10;
L is a linker unit;
Pc is an anti-claudin18.2 antibody or an antigen-binding fragment thereof.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, the anti-claudin18.2 antibody or the antigen-binding fragment thereof comprises a heavy chain variable region and a light chain variable region, wherein:
i) the heavy chain variable region comprises an HCDR1, an HCDR2 and an HCDR3 having sequences identical to those of an HCDR1, an HCDR2 and an HCDR3 of a heavy chain variable region set forth in SEQ ID NO: 3, and the light chain variable region comprises an LCDR1, an LCDR2 and an LCDR3 having sequences identical to those of an LCDR1, an LCDR2 and an LCDR3 of a light chain variable region set forth in SEQ ID NO: 4; or
ii) the heavy chain variable region comprises an HCDR1, an HCDR2 and an HCDR3 having sequences identical to those of an HCDR1, an HCDR2 and an HCDR3 of a heavy chain variable region set forth in SEQ ID NO: 5, and the light chain variable region comprises an LCDR1, an LCDR2 and an LCDR3 having sequences identical to those of an LCDR1, an LCDR2 and an LCDR3 of a light chain variable region set forth in SEQ ID NO: 6.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, the anti-claudin18.2 antibody or the antigen-binding fragment thereof comprises a heavy chain variable region and a light chain variable region, wherein:
iii) the heavy chain variable region comprises an HCDR1, an HCDR2 and an HCDR3 having sequences set forth in SEQ ID NO: 9, SEQ ID NO: 10 and SEQ ID NO: 11, respectively, and the light chain variable region comprises an LCDR1, an LCDR2 and an LCDR3 having sequences set forth in SEQ ID NO: 12, SEQ ID NO: 13 and SEQ ID NO: 14, respectively; or
iv) the heavy chain variable region comprises an HCDR1, an HCDR2 and an HCDR3 having sequences set forth in SEQ ID NO: 15, SEQ ID NO: 16 and SEQ ID NO: 17, respectively, and the light chain variable region comprises an LCDR1, an LCDR2 and an LCDR3 having sequences set forth in SEQ ID NO: 18, SEQ ID NO: 19 and SEQ ID NO: 20, respectively.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, the anti-claudin18.2 antibody is a murine antibody, a chimeric antibody or a humanized antibody.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, the anti-claudin18.2 antibody or the antigen-binding fragment thereof comprises a heavy chain variable region and a light chain variable region, wherein:
(1) the heavy chain variable region has an amino acid sequence set forth in SEQ ID NO: 3 or having at least 90% identity thereto, and the light chain variable region has an amino acid sequence set forth in SEQ ID NO: 4 or having at least 90% identity thereto;
(2) the heavy chain variable region has an amino acid sequence set forth in SEQ ID NO: 24 or having at least 90% identity thereto, and the light chain variable region has an amino acid sequence set forth in SEQ ID NO: 21 or having at least 90% identity thereto;
(3) the heavy chain variable region has an amino acid sequence set forth in SEQ ID NO: 5 or having at least 90% identity thereto, and the light chain variable region has an amino acid sequence set forth in SEQ ID NO: 6 or having at least 90% identity thereto; or
(4) the heavy chain variable region has an amino acid sequence set forth in SEQ ID NO: 31 or having at least 90% identity thereto, and the light chain variable region has an amino acid sequence set forth in SEQ ID NO: 28 or having at least 90% identity thereto.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, the anti-claudin18.2 antibody is a humanized antibody comprising a framework region derived from a human antibody or a framework region variant thereof, and the framework region variant has reverse mutations of up to 10 (e.g., 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10) amino acids in a light chain framework region and/or a heavy chain framework region of the human antibody; preferably, the framework region variant comprises mutations selected from (a) or (b):
(a) one or more amino acid reverse mutations optionally selected from the group consisting of 22S, 85I and 87H, comprised in the light chain variable region; and/or one or more amino acid reverse mutations optionally selected from the group consisting of 48I, 82T and 69M, comprised in the heavy chain variable region; or
(b) one or more amino acid reverse mutations optionally selected from the group consisting of 4L and 22S, comprised in the light chain variable region; and/or one or more amino acid reverse mutations optionally selected from the group consisting of 38K, 40R, 48I, 66K, 67A, 69L, 71L and 73K, comprised in the heavy chain variable region; preferably, the framework region variant comprises mutations selected from the group consisting of:
(a-1) 22S, 85I and 87H amino acid reverse mutations comprised in the light chain variable region, and 48I and 82T amino acid reverse mutations comprised in the heavy chain variable region; or
(b-1) an amino acid reverse mutation selected from 4L, comprised in the light chain variable region.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, the anti-claudin18.2 antibody or the antigen-binding fragment thereof comprises a heavy chain variable region and a light chain variable region shown below:
(vii) the heavy chain variable region having a sequence set forth in SEQ ID NO: 3, and the light chain variable region having a sequence set forth in SEQ ID NO: 4;
(viii) the heavy chain variable region having a sequence set forth in SEQ ID NO: 24, SEQ ID NO: 25, SEQ ID NO: 26 or SEQ ID NO: 27, and the light chain variable region having a sequence set forth in SEQ ID NO: 21, SEQ ID NO: 22 or SEQ ID NO: 23;
(ix) the heavy chain variable region having a sequence set forth in SEQ ID NO: 5, and the light chain variable region having a sequence set forth in SEQ ID NO: 6; or
(x) the heavy chain variable region having a sequence set forth in SEQ ID NO: 31, SEQ ID NO: 32, SEQ ID NO: 33 or SEQ ID NO: 34, and the light chain variable region having a sequence set forth in SEQ ID NO: 28, SEQ ID NO: 29 or SEQ ID NO: 30; preferably, the anti-claudin18.2 antibody or the antigen-binding fragment thereof comprises a heavy chain variable region and a light chain variable region shown below:
(xi) the heavy chain variable region having a sequence set forth in SEQ ID NO: 31, and the light chain variable region having a sequence set forth in SEQ ID NO: 29; or
(xii) the heavy chain variable region having a sequence set forth in SEQ ID NO: 26, and the light chain variable region having a sequence set forth in SEQ ID NO: 23.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, the anti-claudin18.2 antibody or the antigen-binding fragment thereof comprises a heavy chain constant region and a light chain constant region of the antibody; preferably, the heavy chain constant region is selected from the group consisting of human IgG1, IgG2, IgG3 and IgG4 constant regions and conventional variants thereof, and the light chain constant region is selected from the group consisting of human antibody κ and λ chain constant regions and conventional variants thereof; more preferably, the antibody comprises a heavy chain constant region having a sequence set forth in SEQ ID NO: 7 and a light chain constant region having a sequence set forth in SEQ ID NO: 8; most preferably, the antibody comprises: a heavy chain having at least 90% identity to a heavy chain having an amino acid sequence set forth in SEQ ID NO: 35 or SEQ ID NO: 42, and a light chain having at least 90% identity to a light chain having an amino acid sequence set forth in SEQ ID NO: 36 or SEQ ID NO: 39; or
a heavy chain having at least 90% sequence identity to a heavy chain having an amino acid sequence set forth in SEQ ID NO: 37 or SEQ ID NO: 49, and a light chain having at least 90% sequence identity to a light chain having an amino acid sequence set forth in SEQ ID NO: 38 or SEQ ID NO: 46.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, the anti-claudin18.2 antibody or the antigen-binding fragment thereof comprises:
(c) a heavy chain having a sequence set forth in SEQ ID NO: 35 and a light chain having a sequence set forth in SEQ ID NO: 36;
(d) a heavy chain having a sequence set forth in SEQ ID NO: 42, SEQ ID NO: 43, SEQ ID NO: 44 or SEQ ID NO: 45 and a light chain having a sequence set forth in SEQ ID NO: 39, SEQ ID NO: 40 or SEQ ID NO: 41;
(e) a heavy chain having a sequence set forth in SEQ ID NO: 37 and a light chain having a sequence set forth in SEQ ID NO: 38; or
(f) a heavy chain having a sequence set forth in SEQ ID NO: 49, SEQ ID NO: 50, SEQ ID NO: 51 or SEQ ID NO: 52 and a light chain having a sequence set forth in SEQ ID NO: 46, SEQ ID NO: 47 or SEQ ID NO: 48.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, the anti-claudin18.2 antibody is selected from the group consisting of:
h1901-11, comprising a heavy chain having an amino acid sequence set forth in SEQ ID NO: 44 and a light chain having a sequence set forth in SEQ ID NO: 41; and
h1902-5, comprising a heavy chain having an amino acid sequence set forth in SEQ ID NO: 49 and a light chain having a sequence set forth in SEQ ID NO: 47.
In some embodiments of the present disclosure, the antigen-binding fragment is selected from the group consisting of Fab, Fab′, F(ab′)2, single-chain antibody (scFv), dimerized V region (diabody) and disulfide-stabilized V region (dsFv).
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, n may be an integer or decimal from 1-10, and n may be a mean of 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10. n is a decimal or integer from 2 to 8, preferably a decimal or integer from 3 to 8, more preferably a decimal or integer from 5 to 9, or preferably a decimal or integer from 2 to 7. In some embodiments, n is a decimal or integer from 3.5 to 4.5.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments,
Y is —O—(CRaRb)m—CR1R2—C(O)—;
Ra and Rb are identical or different and are each independently selected from the group consisting of hydrogen, deuterium, halogen and alkyl;
R1 is haloalkyl or C3-6 cycloalkyl;
R2 is selected from the group consisting of hydrogen, haloalkyl and C3-6 cycloalkyl;
or, R1 and R2, together with carbon atoms connected thereto, form C3-6 cycloalkyl;
m is 0 or 1.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, Y is selected from the group consisting of
wherein an O-terminus of Y is connected to the linker unit L.
In some embodiments of the present disclosure, provided is a ligand-drug conjugate of general formula (Pc-L-Y-D) or a pharmaceutically acceptable salt or solvate thereof, wherein the linker unit -L- is -L1-L2-L3-L4-.
In some embodiments, L1 is selected from the group consisting of -(succinimidyl-3-yl-N)—W—C(O)—, —CH2—C(O)—NR3—W—C(O)— and —C(O)—W—C(O)—, wherein W is selected from the group consisting of C1-8 alkyl, C1-8 alkyl-C3-6 cycloalkyl and linear heteroalkyl of 1 to 8 chain atoms, and the heteroalkyl comprises 1 to 3 heteroatoms selected from the group consisting of N, O and S, wherein the C1-8 alkyl, C1-8 alkyl-C3-6 cycloalkyl or linear heteroalkyl of 1 to 8 chain atoms is independently optionally further substituted with one or more substituents selected from the group consisting of halogen, hydroxy, cyano, amino, alkyl, chloroalkyl, deuterated alkyl, alkoxy and cycloalkyl.
In some embodiments, L2 is selected from the group consisting of —NR4(CH2CH2O)p1CH2CH2C(O)—, —NR4(CH2CH2O)p1CH2C(O)—, —S(CH2)p1C(O)— and a chemical bond, wherein p1 is an integer from 1 to 20.
In some embodiments, L3 is a peptide residue consisting of 2 to 7 amino acids, wherein the amino acids are selected from the group consisting of amino acid residues formed from amino acids from phenylalanine, glycine, valine, lysine, citrulline, serine, glutamic acid and aspartic acid, and are optionally further substituted with one or more substituents selected from the group consisting of halogen, hydroxy, cyano, amino, alkyl, chloroalkyl, deuterated alkyl, alkoxy and cycloalkyl.
In some embodiments, L4 is selected from the group consisting of —NR5(CR6R7)t—, —C(O)NR5—, —C(O)NR5(CH2)t— and a chemical bond, wherein t is an integer from 1 to 6.
In some embodiments, R3, R4 and R5 are identical or different and are each independently selected from the group consisting of hydrogen, alkyl, haloalkyl, deuterated alkyl and hydroxyalkyl.
In some embodiments, R6 and R7 are identical or different and are each independently selected from the group consisting of hydrogen, halogen, alkyl, haloalkyl, deuterated alkyl and hydroxyalkyl.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt or solvate thereof according to any one of the aforementioned embodiments, the linker unit -L- is -L1-L2-L3-L4-, wherein
L1 is selected from the group consisting of -(succinimidyl-3-yl-N)—W—C(O)—, —CH2—C(O)—NR3—W—C(O)— and —C(O)—W—C(O)—, wherein W is selected from the group consisting of C1-8 alkyl, C1-8 alkyl-cycloalkyl and linear heteroalkyl of 1 to 8 chain atoms, and the heteroalkyl comprises 1 to 3 heteroatoms selected from the group consisting of N, O and S, wherein the C1-8 alkyl, cycloalkyl and linear heteroalkyl are each independently optionally further substituted with one or more substituents selected from the group consisting of halogen, hydroxy, cyano, amino, alkyl, chloroalkyl, deuterated alkyl, alkoxy and cycloalkyl;
L2 is selected from the group consisting of —NR4(CH2CH2O)p1CH2CH2C(O)—, —NR4(CH2CH2O)p1CH2C(O)—, —S(CH2)p1C(O)— and a chemical bond, wherein p1 is an integer from 1 to 20;
L3 is a peptide residue consisting of 2 to 7 amino acids, wherein the amino acids are selected from the group consisting of amino acid residues formed from amino acids from phenylalanine, glycine, valine, lysine, citrulline, serine, glutamic acid and aspartic acid, and are optionally further substituted with one or more substituents selected from the group consisting of halogen, hydroxy, cyano, amino, alkyl, chloroalkyl, deuterated alkyl, alkoxy and cycloalkyl;
L4 is selected from the group consisting of —NR5(CR6R7)t—, —C(O)NR5, —C(O)NR5(CH2)t— and a chemical bond, wherein t is an integer from 1 to 6;
R3, R4 and R5 are identical or different and are each independently selected from the group consisting of hydrogen, alkyl, haloalkyl, deuterated alkyl and hydroxyalkyl;
R6 and R7 are identical or different and are each independently selected from the group consisting of hydrogen, halogen, alkyl, haloalkyl, deuterated alkyl and hydroxyalkyl.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, the linker unit -L- is -L1-L2-L3-L4-, wherein
and s1 is an integer from 2 to 8;
L2 is a chemical bond;
L3 is a tetrapeptide residue, preferably a tetrapeptide residue of GGFG (SEQ ID NO: 55);
L4 is —NR5(CR6R7)t-, wherein R5, R6 and R7 are identical or different and are each independently hydrogen or alkyl, and t is 1 or 2;
wherein the L1 terminus is connected to Pc, and the L4 terminus is connected to Y.
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, -L- is:
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, -L-Y— is optionally selected from the group consisting of:
In some embodiments of the present disclosure, the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments is a ligand-drug conjugate of general formula (Pc-La-Y-D) or a pharmaceutically acceptable salt thereof,
wherein:
W, L2, L3, R5, R6 and R7 are as defined in the aforementioned linker unit -L-;
Pc, n, R1, R2 and m are as defined in general formula (Pc-L-Y-D).
In some embodiments of the present disclosure, the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments is a ligand-drug conjugate of general formula (Pc-Lb-Y-D) or a pharmaceutically acceptable salt thereof,
wherein:
s1 is an integer from 2 to 8;
Pc, R1, R2, R5-R7, m and n are as defined in general formula (Pc-La-Y-D).
In some embodiments of the present disclosure, in the ligand-drug conjugate of general formula (Pc-L-Y-D) or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments, the ligand-drug conjugate is selected from the group consisting of:
wherein Pc and n are as defined in general formula (Pc-L-Y-D).
In some embodiments of the present disclosure, provided is a ligand-drug conjugate of general formula (Pc-L-Y-D) or a pharmaceutically acceptable salt thereof, wherein the ligand-drug conjugate is selected from the group consisting of:
wherein n is as defined in general formula (Pc-L-Y-D), and the antibodies h1902-5 and h1901-11 are as previously defined.
The present disclosure further provides a method for preparing a ligand-drug conjugate of general formula (Pc-La-Y-D) or a pharmaceutically acceptable salt thereof comprising the following steps:
subjecting Pc′ and a compound of general formula (La-Y-D) to a coupling reaction to give a compound of general formula (Pc-La-Y-D);
wherein:
Pc is the anti-claudin18.2 antibody or the antigen-binding fragment thereof described above, and Pc′ is obtained by reduction of Pc;
W, L2, L3, R1, R2, R5-R7, m and n are as defined in general formula (Pc-La-Y-D).
The present disclosure further provides a method for preparing an antibody drug conjugate of general formula (Pc-L′-D) comprising the following step:
subjecting reduced Pc and general formula (L′-D) to a coupling reaction to give a compound, wherein:
Pc is the anti-claudin18.2 antibody or the antigen-binding fragment thereof described above;
n is as defined in general formula (Pc-L-Y-D).
In another aspect, the present disclosure provides a pharmaceutical composition comprising the ligand-drug conjugate or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments and one or more pharmaceutically acceptable excipients, diluents or carriers.
In another aspect, the present disclosure provides use of the ligand-drug conjugate or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments or a pharmaceutical composition comprising the same as a medicament. In some embodiments, the medicament is for treating a claudin18.2-mediated disease or condition; the claudin18.2-mediated disease or condition is preferably a cancer with high claudin18.2 expression. In some embodiments, the medicament is for treating cancer. In some embodiments, the cancer is preferably head and neck squamous cell carcinoma, head and neck cancer, brain cancer, neuroglioma, glioblastoma multiforme, neuroblastoma, central nervous system carcinoma, neuroendocrine tumor, throat cancer, nasopharyngeal cancer, esophageal cancer, thyroid cancer, malignant pleural mesothelioma, lung cancer, breast cancer, liver cancer, hepatobiliary cancer, pancreatic cancer, stomach cancer, gastrointestinal cancer, intestinal cancer, colon cancer, colorectal cancer, kidney cancer, clear cell renal cell carcinoma, ovarian cancer, endometrial cancer, cervical cancer, bladder cancer, prostate cancer, testicular cancer, skin cancer, melanoma, leukemia, lymphoma, bone cancer, chondrosarcoma, myeloma, multiple myeloma, myelodysplastic syndrome, Krukenberg tumor, myeloproliferative tumor, squamous cell carcinoma, Ewing's sarcoma, systemic light chain amyloidosis or Merkel cell carcinoma; more preferably, the lymphoma is selected from the group consisting of Hodgkin's lymphoma, non-Hodgkin's lymphoma, diffuse large B-cell lymphoma, follicular lymphoma, primary mediastinal large B-cell lymphoma, mantle cell lymphoma, small lymphocytic lymphoma, large B-cell lymphoma rich in T-cells/histiocytes and lymphoplasmacytic lymphoma, the lung cancer is selected from the group consisting of non-small cell lung cancer and small cell lung cancer, and the leukemia is selected from the group consisting of chronic myeloid leukemia, acute myeloid leukemia, lymphocytic leukemia, lymphoblastic leukemia, acute lymphoblastic leukemia, chronic lymphocytic leukemia and myeloid cell leukemia.
In another aspect, the present disclosure provides use of the ligand-drug conjugate or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments or a pharmaceutical composition comprising the same in preparing a medicament for treating a claudin18.2-mediated disease or condition, wherein the claudin18.2-mediated disease or condition is a cancer with high claudin18.2 expression. In some embodiments, the disease is preferably head and neck squamous cell carcinoma, head and neck cancer, brain cancer, neuroglioma, glioblastoma multiforme, neuroblastoma, central nervous system carcinoma, neuroendocrine tumor, throat cancer, nasopharyngeal cancer, esophageal cancer, thyroid cancer, malignant pleural mesothelioma, lung cancer, breast cancer, liver cancer, hepatobiliary cancer, pancreatic cancer, stomach cancer, gastrointestinal cancer, intestinal cancer, colon cancer, colorectal cancer, kidney cancer, clear cell renal cell carcinoma, ovarian cancer, endometrial cancer, cervical cancer, bladder cancer, prostate cancer, testicular cancer, skin cancer, melanoma, leukemia, lymphoma, bone cancer, chondrosarcoma, myeloma, multiple myeloma, myelodysplastic syndrome, Krukenberg tumor, myeloproliferative tumor, squamous cell carcinoma, Ewing's sarcoma, systemic light chain amyloidosis or Merkel cell carcinoma; more preferably, the lymphoma is selected from the group consisting of Hodgkin's lymphoma, non-Hodgkin's lymphoma, diffuse large B-cell lymphoma, follicular lymphoma, primary mediastinal large B-cell lymphoma, mantle cell lymphoma, small lymphocytic lymphoma, large B-cell lymphoma rich in T-cells/histiocytes and lymphoplasmacytic lymphoma, the lung cancer is selected from the group consisting of non-small cell lung cancer and small cell lung cancer, and the leukemia is selected from the group consisting of chronic myeloid leukemia, acute myeloid leukemia, lymphocytic leukemia, lymphoblastic leukemia, acute lymphoblastic leukemia, chronic lymphocytic leukemia and myeloid cell leukemia.
In another aspect, the present disclosure provides use of the ligand-drug conjugate or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments or a pharmaceutical composition comprising the same in preparing a medicament for treating or preventing a tumor, wherein the tumor and cancer are preferably head and neck squamous cell carcinoma, head and neck cancer, brain cancer, neuroglioma, glioblastoma multiforme, neuroblastoma, central nervous system carcinoma, neuroendocrine tumor, throat cancer, nasopharyngeal cancer, esophageal cancer, thyroid cancer, malignant pleural mesothelioma, lung cancer, breast cancer, liver cancer, hepatobiliary cancer, pancreatic cancer, stomach cancer, gastrointestinal cancer, intestinal cancer, colon cancer, colorectal cancer, kidney cancer, clear cell renal cell carcinoma, ovarian cancer, endometrial cancer, cervical cancer, bladder cancer, prostate cancer, testicular cancer, skin cancer, melanoma, leukemia, lymphoma, bone cancer, chondrosarcoma, myeloma, multiple myeloma, myelodysplastic syndrome, Krukenberg tumor, myeloproliferative tumor, squamous cell carcinoma, Ewing's sarcoma, systemic light chain amyloidosis or Merkel cell carcinoma; more preferably, the lymphoma is selected from the group consisting of Hodgkin's lymphoma, non-Hodgkin's lymphoma, diffuse large B-cell lymphoma, follicular lymphoma, primary mediastinal large B-cell lymphoma, mantle cell lymphoma, small lymphocytic lymphoma, large B-cell lymphoma rich in T-cells/histiocytes and lymphoplasmacytic lymphoma, the lung cancer is selected from the group consisting of non-small cell lung cancer and small cell lung cancer, and the leukemia is selected from the group consisting of chronic myeloid leukemia, acute myeloid leukemia, lymphocytic leukemia, lymphoblastic leukemia, acute lymphoblastic leukemia, chronic lymphocytic leukemia and myeloid cell leukemia.
In another aspect, the present disclosure further relates to a method for treating and/or preventing a tumor, the method comprising administering to a subject in need thereof a therapeutically or prophylactically effective dose of the ligand-drug conjugate or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments or a pharmaceutical composition comprising the same, wherein the tumor is preferably a cancer associated with high claudin18.2 expression.
In another aspect, the present disclosure further relates to a method for treating or preventing cancer, the method comprising administering to a subject in need thereof a therapeutically or prophylactically effective dose of the ligand-drug conjugate or the pharmaceutically acceptable salt thereof according to any one of the aforementioned embodiments or a pharmaceutical composition comprising the same, wherein the tumor and cancer are preferably head and neck squamous cell carcinoma, head and neck cancer, brain cancer, neuroglioma, glioblastoma multiforme, neuroblastoma, central nervous system carcinoma, neuroendocrine tumor, throat cancer, nasopharyngeal cancer, esophageal cancer, thyroid cancer, malignant pleural mesothelioma, lung cancer, breast cancer, liver cancer, hepatobiliary cancer, pancreatic cancer, stomach cancer, gastrointestinal cancer, intestinal cancer, colon cancer, colorectal cancer, kidney cancer, clear cell renal cell carcinoma, ovarian cancer, endometrial cancer, cervical cancer, bladder cancer, prostate cancer, testicular cancer, skin cancer, melanoma, leukemia, lymphoma, bone cancer, chondrosarcoma, myeloma, multiple myeloma, myelodysplastic syndrome, Krukenberg tumor, myeloproliferative tumor, squamous cell carcinoma, Ewing's sarcoma, systemic light chain amyloidosis or Merkel cell carcinoma; more preferably, the lymphoma is selected from the group consisting of Hodgkin's lymphoma, non-Hodgkin's lymphoma, diffuse large B-cell lymphoma, follicular lymphoma, primary mediastinal large B-cell lymphoma, mantle cell lymphoma, small lymphocytic lymphoma, large B-cell lymphoma rich in T-cells/histiocytes and lymphoplasmacytic lymphoma, the lung cancer is selected from the group consisting of non-small cell lung cancer and small cell lung cancer, and the leukemia is selected from the group consisting of chronic myeloid leukemia, acute myeloid leukemia, lymphocytic leukemia, lymphoblastic leukemia, acute lymphoblastic leukemia, chronic lymphocytic leukemia and myeloid cell leukemia.
The active compound (e.g., the ligand-drug conjugate or the pharmaceutically acceptable salt thereof according to the present disclosure) may be formulated in a form suitable for administration by any suitable route, preferably in a form of a unit dose, or in a form of a single dose that can be self-administered by a subject. The unit dose of the present disclosure may be in a tablet, a capsule, a cachet, a vial, a powder, a granule, a lozenge, a suppository, a regenerating powder or a liquid formulation.
The administration dose of the active compound or composition used in the treatment method of the present disclosure will generally vary with the severity of the disease, the weight of the subject, and the efficacy of the active compound. However, as a general guide, a suitable unit dose may be 0.1 to 1000 mg.
The pharmaceutical composition of the present disclosure may comprise, in addition to the active compound, one or more excipients selected from the group consisting of a filler, a diluent, a binder, a wetting agent, a disintegrant, an excipient and the like. Depending on the method of administration, the composition may comprise 0.1 to 99 wt. % of active compound.
The claudin18.2 antibody and the antibody-drug conjugate provided by the present disclosure have good affinity for cell surface antigens, good endocytosis efficiency and high tumor inhibition efficiency as well as wider drug application windows, and are suitable for clinical drug application.
Unless otherwise defined, all technical and scientific terms used herein have the same meaning as commonly understood by those of ordinary skill in the art to which the present disclosure belongs. Although any methods and materials similar or equivalent to those described herein can also be used to implement or test the present disclosure, preferred methods and materials are described herein. In describing and claiming the present disclosure, the following terms are used in accordance with the definitions below. When a trade name is used in the present disclosure, it is intended to include the formulation of the product under the trade name and the non-patent drug and active drug components of the product under the trade name.
Unless otherwise stated, the terms used in the specification and claims have the following meanings.
The term “drug” refers to a chemical substance that can alter or ascertain an organism's physiology and pathological state and can be used for the prevention, diagnosis and treatment of diseases. The drug includes a cytotoxic drug. There is no clear boundary between a drug and a toxic substance. The toxic substance refers to a chemical substance that has a toxic effect on organisms and can cause damage to human health even in small doses. Any drug in large doses may induce toxic responses. The cytotoxic drug refers to a substance that inhibits or prevents cell functions and/or cause cell death or cell destruction. The cytotoxic drug can kill tumor cells in principle at a sufficiently high concentration; however, due to lack of specificity, the cytotoxic drug can cause apoptosis of normal cells while killing tumor cells, resulting in serious side effects. The cytotoxic drug includes toxins, such as small molecule toxins or enzymatically active toxins of bacterial, fungal, plant or animal origin, radioisotopes (e.g., At211, I131, I125, Y90 Re186, Re188, Sm153, Bi212, P32 and radioactive isotopes of Lu), toxin drugs, chemotherapeutic drugs, antibiotics and nucleolytic enzymes.
The term “linker unit”, “linker” or “linker fragment” refers to a chemical structural fragment or bond that is linked at one end to a ligand (e.g., an antibody or an antigen-binding fragment thereof) and at the other end to a drug or is linked to other linkers before being linked to the drug.
The linker may comprise one or more linker components. Exemplary linker components include 6-maleimidocaproyl (“MC”), maleimidopropionyl (“MP”), valine-citrulline (“val-cit” or “vc”), alanine-phenylalanine (“ala-phe”), p-aminobenzyloxycarbonyl (“PAB”), N-succinimidyl 4-(2-pyridylthio)pentanoate (“SPP”), N-succinimidyl 4-(N-maleimidomethyl)cyclohexane-1 carboxylate (“SMCC”, also referred to herein as “MCC”), and N-succinimidyl(4-iodo-acetyl)aminobenzoate (“SIAB”). The linker may include stretcher units, spacer units and amino acid units, and may be synthesized using methods known in the art, such as those described in US2005-0238649A1. The linker may be a “cleavable linker” favoring the release of drugs in cells. For example, acid-labile linkers (e.g., hydrazones), protease-sensitive (e.g., peptidase-sensitive) linkers, photolabile linkers, dimethyl linkers or disulfide-containing linkers can be used (Chari et al., Cancer Research 52: 127-131(1992); U.S. Pat. No. 5,208,020).
Linker components include, but are not limited to:
MC=6-maleimidocaproyl, with a structure:
Val-Cit or “vc”=valine-citrulline (an exemplary dipeptide in a protease cleavable linker),
citrulline=2-amino-5-ureidopentanoic acid,
PAB=p-aminobenzyloxycarbonyl (an example of “self-immolative” linker components),
Me-Val-Cit=N-methyl-valine-citrulline (where the linker peptide bond has been modified to prevent it from being cleaved by cathepsin B),
MC(PEG)6-OH=maleimidocaproyl-polyethylene glycol (attachable to antibody cysteine),
SPP=N-succinimidyl 4-(2-pyridylthio)valerate,
SPDP=N-succinimidyl 3-(2-pyridyldithio)propionate,
SMCC=succinimidyl-4-(N-maleimidomethyl)cyclohexane-1-carboxylate,
IT=iminothiolane.
The term “ligand-drug conjugate” means that a ligand is linked to a biologically active drug by a linking unit. In the present disclosure, the “ligand-drug conjugate” is preferably an antibody-drug conjugate (ADC), which means that a monoclonal antibody or an antibody fragment is linked to a biologically active toxic drug by a linking unit. The antibody may be conjugated to the drug directly or via a linker. The mean number of drug modules conjugated to each antibody (the mean drug loading or drug loading, which may be expressed in terms of n) may range, for example, from about 0 to about 20 drug modules; in certain embodiments, from 1 to about 10 drug modules; and in certain embodiments, from 1 to about 8 drug modules.
The term “mean drug loading” or “drug loading” refers to the mean number of cytotoxic drug loaded per ligand in ligand-drug conjugate molecules, and may also be expressed in terms of the drug-to-antibody ratio. The drug loading may range from 0-12, preferably 1-10, cytotoxic drugs per ligand (Pc). In the embodiments of the present disclosure, the drug loading is expressed in terms of n, which may also be referred to as a DAR (drug-antibody ratio) value and may be a non-zero integer or decimal from 0 to 12, preferably an integer or decimal from 1 to 10, more preferably an integer or decimal from 2 to 8, and most preferably an integer or decimal from 3 to 8. Examples are means of 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10. The mean number of drugs per ADC molecule after coupling reactions can be characterized by conventional methods such as UV/visible spectroscopy, mass spectrometry, ELISA assays and HPLC.
The three-letter and single-letter codes for amino acids used in the present disclosure are as described in J. biol. chem, 243, p 3558 (1968).
Claudin18 (CLD18) molecules (Genbank Accession Numbers: splice variant 1 (CLD18A1): NP_057453, NM016369, and splice variant 2 (CLD18A2 or claudin18.2): NM_001002026, NP_001002026) are intrinsic transmembrane proteins, residing within tight junctions of the epithelium and endothelium. In tight junctions, occludins and claudins are predominant transmembrane protein components. Due to the strong intercellular adhesion property of claudins, they create a primary barrier that prevents and controls the paracellular transport of solutes and limits the lateral diffusion of membrane lipids and proteins to maintain cellular polarity. Proteins that form into tight junctions are involved in the structure of epithelium tissues. It is reported that these proteins can hardly get close to antibodies in well-constructed epithelia, but become exposed in tumor cells.
The term “antibody” refers to an immunoglobulin, which is of a tetrapeptide chain structure formed by connection between two heavy chains and two light chains by interchain disulfide bonds. According to differences in the amino acid composition and the order of arrangement of the heavy chain constant regions, immunoglobulins can be divided into five classes, otherwise called isotypes of immunoglobulins, namely IgM, IgD, IgG, IgA and IgE, with their corresponding heavy chains being μ chain, δ chain, γ chain, α chain and ε chain, respectively. Ig of the same class can be divided into different subclasses according to differences in the amino acid composition of the hinge regions and the number and positions of disulfide bonds of the heavy chains; for example, IgG may be divided into IgG1, IgG2, IgG3 and IgG4. Light chains are classified into κ or λ chains by the differences in the constant regions. Each of the five classes of Ig may have a κ chain or λ chain.
In the heavy and light chains of full-length antibodies, the sequences of about 110 amino acids near the N-terminus vary considerably and thus are referred to as variable regions (Fv regions); the remaining amino acid sequences near the C-terminus are relatively stable and thus are referred to as constant regions. The variable regions comprise 3 hypervariable regions (HVRs) and 4 framework regions (FRs) with relatively conservative sequences. The 3 hypervariable regions determine the specificity of the antibody and thus are also known as complementarity determining regions (CDRs). Each light chain variable region (LCVR) or heavy chain variable region (HCVR) consists of 3 CDRs and 4 FRs arranged from the amino-terminus to the carboxy-terminus in the following order: FR1, CDR1, FR2, CDR2, FR3, CDR3 and FR4. The 3 CDRs of the light chain refer to LCDR1, LCDR2 and LCDR3, and the 3 CDRs of the heavy chain refer to HCDR1, HCDR2 and HCDR3.
The term “fully humanized antibody”, “fully human antibody” or “completely human antibody”, also known as “fully humanized monoclonal antibody”, has both a humanized variable region and a constant region. The development of monoclonal antibodies has four stages, namely murine monoclonal antibodies, chimeric monoclonal antibodies, humanized monoclonal antibodies and fully humanized monoclonal antibodies. Major relevant technologies for the preparation of fully human antibodies include: human hybridoma technology, EBV-transformed B-lymphocyte technology, phage display technology, transgenic mouse antibody preparation technology, single B-cell antibody preparation technology, and the like.
The term “antigen-binding fragment” refers to one or more fragments of an antibody that retain the ability to bind to an antigen. It is shown that a fragment of a full-length antibody can be used to perform the antigen-binding function of the antibody. The binding fragment included in the “antigen-binding fragment” is selected from the group consisting of Fab, Fab′, F(ab′)2, single-chain antibody (scFv), dimerized V region (diabody), disulfide-stabilized V region (dsFv), and antigen-binding fragments of peptides comprising CDRs; examples include (i) Fab fragments, monovalent fragments consisting of VL, VH, CL and CH1 domains; (ii) F(ab′)2 fragments, bivalent fragments comprising two Fab fragments connected by disulfide bridges in the hinge regions; (iii) Fd fragments consisting of VH and CH1 domains; (iv) Fv fragments consisting of VH and VL domains of a single arm of an antibody; (v) single domains or dAb fragments (Ward et al., (1989) Nature 341:544-546) consisting of VH domains; and (vi) isolated complementarity determining regions (CDRs) or (vii) combinations of two or more isolated CDRs which may optionally be linked by synthetic linkers. Furthermore, although the two domains of the Fv fragment, VL and VH, are encoded by separate genes, they can be linked by a synthetic linker by recombination, thereby enabling it to produce a single protein chain in which the VL and VH regions pair to form a monovalent molecule (referred to as single chain Fv (scFv); see, e.g., Bird et al. (1988) Science 242:423-426; and Huston et al. (1988) Proc. Natl. Acad. Sci USA 85:5879-5883). Such single-chain antibodies are also intended to be included in the term “antigen-binding fragment” of an antibody. Such antibody fragments are obtained using conventional techniques known to those skilled in the art, and screened for utility in the same manner as for intact antibodies. Antigen-binding portions may be produced using recombinant DNA technology or by enzymatic or chemical cleavage of intact immunoglobulins. Antibodies may be of different isotypes, e.g., IgG (e.g., subtype IgG1, IgG2, IgG3 or IgG4), IgA1, IgA2, IgD, IgE or IgM antibody.
In general, Fab is an antibody fragment having a molecular weight of about 50,000 and having antigen-binding activity, among fragments obtained by treating an IgG antibody molecule with a protease papain (e.g., cleaving the amino acid residue at position 224 of H chain), in which a portion on the N-terminal side of H chain is combined with L chain by a disulfide bond.
In general, F(ab′)2 is an antibody fragment obtained by digesting the portion below the disulfide bond in the IgG hinge region with the enzyme pepsin. It has a molecular weight of about 100,000, has antigen-binding activity, and comprises two Fab regions linked at the hinge position.
In general, Fab′ is an antibody fragment having a molecular weight of about 50,000 and having antigen-binding activity, obtained by cleaving the disulfide bond in the hinge region of the F(ab′)2 described above.
In addition, Fab′ may be produced by inserting DNA encoding the Fab′ fragment into a prokaryotic or eukaryotic expression vector and introducing the vector into a prokaryote or a eukaryote to express the Fab′.
The term “single-chain antibody”, “single-chain Fv” or “scFv” means a molecule comprising an antibody heavy chain variable domain (or VH) and an antibody light chain variable domain (or VL) linked by a linker. Such scFv molecules may have a general structure: NH2-VL-linker-VH-COOH or NH2-VH-linker-VL-COOH. Suitable linkers in the prior art consist of repeated GGGGS amino acid sequences or variants thereof, for example, 1-4 repeated variants (Holliger et al. (1993), Proc. Natl. Acad. Sci. USA 90:6444-6448). Other linkers that can be used in the present disclosure are described in Alfthan et al. (1995), Protein Eng. 8:725-731; Choi et al. (2001), Eur. J Immunol. 31:94-106; Hu et al. (1996), Cancer Res. 56:3055-3061, Kipriyanov et al. (1999), J. Mol. Biol. 293:41-56; and Roovers et al. (2001), Cancer Immunol.
The term “CDR” refers to one of the 6 hypervariable regions within the variable domain of an antibody which primarily contribute to antigen binding. In general, there are three CDRs (HCDR1, HCDR2 and HCDR3) in each heavy chain variable region and three CDRs (LCDR1, LCDR2 and LCDR3) in each light chain variable region. The amino acid sequence boundaries of the CDRs can be determined using any of a variety of well-known schemes. One of the most common definitions for the 6 CDRs is provided in Kabat E. A. et al., (1991) Sequences of proteins of immunological interest. NIH Publication 91-3242. As used herein, the Kabat definition of CDRs applies only to the CDR1, CDR2 and CDR3 of the light chain variable domain, and to the CDR2 and CDR3 of the heavy chain variable domain. Also included are the “Chothia” numbering scheme, the “ABM” numbering scheme, the “contact” numbering scheme (see Martin, ACR. Protein Sequence and Structure Analysis of Antibody Variable Domains[J]. 2001), the ImMunoGenTics (IMGT) numbering scheme (Lefranc M. P., Dev. Comp. Immunol., 27, 55-77(2003)), etc.
The term “antibody framework” refers to a portion of a variable domain VL or VH, which serves as a framework for the antigen-binding loops (CDRs) of the variable domain. It is essentially a variable domain without CDRs.
The term “epitope” or “antigenic determinant” refers to a site on an antigen to which an immunoglobulin or antibody binds. Epitopes typically comprise at least 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14 or 15 contiguous or non-contiguous amino acids in a unique spatial conformation. See, e.g., Epitope Mapping Protocols in Methods in Molecular Biology, volume 66, G. E. Morris, Ed. (1996).
The terms “specific binding”, “selective binding”, “selectively bind to” and “specifically bind to” refer to the binding of an antibody to an epitope on a predetermined antigen. In general, the antibody binds with an affinity (KD) of less than about 10−7 M, e.g., less than about 10−8 M, 10−9 M, or 10−10 M or less.
The term “KD” refers to the dissociation equilibrium constant for antibody-antigen interaction. In general, the antibody (or antigen-binding fragment) of the present disclosure binds to claudin18.2 (or an epitope thereof) with a dissociation equilibrium constant (KD) of less than about 10−7 M, e.g., less than about 10−8 M or 10−9 M; for example, the KD value is determined using FACS method for the affinity of the antibody of the present disclosure for cell surface antigens.
The term “nucleic acid molecule” refers to a DNA molecule or an RNA molecule. The nucleic acid molecule may be single-stranded or double-stranded, but is preferably double-stranded DNA. A nucleic acid is “operably linked” when it is placed into a functional relationship with another nucleic acid sequence. For example, a promoter or enhancer is operably linked to a coding sequence if it affects the transcription of the coding sequence.
The amino acid sequence “identity” refers to the percentage of amino acid residues shared by a first sequence and a second sequence, wherein in aligning the amino acid sequences, gaps are introduced, when necessary, to achieve maximum percent sequence identity, and any conservative substitution is not considered as part of the sequence identity. For the purpose of determining percent amino acid sequence identity, alignment can be achieved in a variety of ways that fall within the art, for example, using publicly available computer software such as BLAST, BLAST-2, ALIGN-2 or Megalign (DNASTAR) software. Those skilled in the art can determine parameters suitable for measuring alignment, including any algorithm required to achieve maximum alignment of the full length of the aligned sequences.
The term “expression vector” refers to a nucleic acid molecule capable of transporting another nucleic acid to which it is linked. In one embodiment, the vector is a “plasmid”, which refers to a circular double-stranded DNA loop into which other DNA segments can be ligated. In another embodiment, the vector is a viral vector where other DNA segments can be ligated into the viral genome. The vectors disclosed herein are capable of autonomously replicating in a host cell into which they are introduced (e.g., bacterial vectors having a bacterial origin of replication and episomal mammalian vectors) or capable of integrating into the genome of a host cell after being introduced into the host cell and thus replicating with the host genome (e.g., non-episomal mammalian vectors).
Methods of producing and purifying antibodies and antigen-binding fragments are well known in the art, for example, those described in chapters 5-8 and 15 of Antibodies: A Laboratory Manual, Cold Spring Harbor Press. Antigen-binding fragments can likewise be prepared using conventional methods. The antibody or antigen-binding fragment described in the present invention is genetically engineered to contain one or more additional human FRs in the non-human CDRs. Human FR germline sequences can be obtained at the website of ImMunoGeneTics (IMGT) http://imgt.cines.fr or from the immunoglobulin journal, Lefranc, G., the Immunoglobulin FactsBook, Academic Press, 2001ISBN012441351, by alignment with the IMGT human antibody variable region germline gene database and the MOE software.
The term “host cell” refers to a cell into which an expression vector is introduced. Host cells may include bacterial, microbial, plant or animal cells. Bacteria susceptible to transformation include members of the Enterobacteriaceae family, such as strains of Escherichia coli or Salmonella; members of the Bacillaceae family, such as Bacillus subtilis; Pneumococcus; Streptococcus; and Haemophilus influenzae. Suitable microorganisms include Saccharomyces cerevisiae and Pichia pastoris. Suitable animal host cell lines include CHO (Chinese hamster ovary cell line) and NS0 cells.
The engineered antibody or antigen-binding fragment of the present disclosure can be prepared and purified using conventional methods. For example, cDNA sequences encoding the heavy and light chains can be cloned and recombined into an expression vector. Recombinant immunoglobulin expression vectors can be stably transfected into host cells. As a more recommended prior art, mammalian expression systems will result in glycosylation of the antibody, particularly at the N-terminal site of the Fc region. Positive clones are expanded in a medium in a bioreactor to produce the antibody. The culture with the secreted antibody can be purified using conventional techniques, for example, using an A or G Sepharose FF column. Non-specifically bound fractions are washed away. The bound antibody is eluted using pH gradient method, and the antibody fragments are detected by SDS-PAGE and collected. The antibody can be filtered and concentrated using conventional methods. Soluble mixtures and polymers can also be removed using conventional methods, such as molecular sieves and ion exchange. The resulting product needs to be immediately frozen, e.g., at −70° C., or lyophilized.
The term “peptide” refers to a compound fragment between an amino acid and a protein. It is formed by connecting 2 or more amino acid molecules by peptide bonds, and is a structural and functional fragment of the protein.
The term “sugar” refers to biomacromolecules consisting of C, H and O elements. They can be classified into monosaccharides, disaccharides, polysaccharides, etc.
The term “alkyl” refers to a saturated aliphatic hydrocarbon group, which is a linear or branched group containing 1 to 20 carbon atoms, preferably an alkyl group containing 1 to 12 carbon atoms, more preferably an alkyl group containing 1 to 10 carbon atoms, and most preferably an alkyl group containing 1 to 6 carbon atoms (containing 1, 2, 3, 4, 5 or 6 carbon atoms). Non-limiting examples include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, sec-butyl, n-pentyl, 1,1-dimethylpropyl, 1,2-dimethylpropyl, 2,2-dimethylpropyl, 1-ethylpropyl, 2-methylbutyl, 3-methylbutyl, n-hexyl, 1-ethyl-2-methylpropyl, 1,1,2-trimethylpropyl, 1,1-dimethylbutyl, 1,2-dimethylbutyl, 2,2-dimethylbutyl, 1,3-dimethylbutyl, 2-ethylbutyl, 2-methylpentyl, 3-methylpentyl, 4-methylpentyl, 2,3-dimethylbutyl, n-heptyl, 2-methylhexyl, 3-methylhexyl, 4-methylhexyl, 5-methylhexyl, 2,3-dimethylpentyl, 2,4-dimethylpentyl, 2,2-dimethylpentyl, 3,3-dimethylpentyl, 2-ethylpentyl, 3-ethylpentyl, n-octyl, 2,3-dimethylhexyl, 2,4-dimethylhexyl, 2,5-dimethylhexyl, 2,2-dimethylhexyl, 3,3-dimethylhexyl, 4,4-dimethylhexyl, 2-ethylhexyl, 3-ethylhexyl, 4-ethylhexyl, 2-methyl-2-ethylpentyl, 2-methyl-3-ethylpentyl, n-nonyl, 2-methyl-2-ethylhexyl, 2-methyl-3-ethylhexyl, 2,2-diethylpentyl, n-decyl, 3,3-diethylhexyl, 2,2-diethylhexyl, various side-chain isomers thereof, etc. More preferred is a lower alkyl having 1 to 6 carbon atoms, and non-limiting examples include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, sec-butyl, n-pentyl, 1,1-dimethylpropyl, 1,2-dimethylpropyl, 2,2-dimethylpropyl, 1-ethylpropyl, 2-methylbutyl, 3-methylbutyl, n-hexyl, 1-ethyl-2-methylpropyl, 1,1,2-trimethylpropyl, 1,1-dimethylbutyl, 1,2-dimethylbutyl, 2,2-dimethylbutyl, 1,3-dimethylbutyl, 2-ethylbutyl, 2-methylpentyl, 3-methylpentyl, 4-methylpentyl, 2,3-dimethylbutyl, etc. Alkyl may be substituted or unsubstituted. When substituted, the substituent may be substituted at any available connection site, wherein the substituent is preferably one or more of the following groups independently selected from the group consisting of alkyl, alkenyl, alkynyl, alkoxy, alkylthio, alkylamino, halogen, mercapto, hydroxy, nitro, cyano, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, cycloalkoxy, heterocycloalkoxy, cycloalkylthio, heterocycloalkylthio and oxo.
The term “heteroalkyl” refers to an alkyl group containing one or more heteroatoms selected from the group consisting of N, O and S, wherein the alkyl is as defined above.
The term “alkylene” refers to a saturated linear or branched aliphatic hydrocarbon group having 2 residues derived from the parent alkane by removal of two hydrogen atoms from the same carbon atom or two different carbon atoms. It is a linear or branched group containing 1 to 20 carbon atoms, preferably alkylene containing 1 to 12 carbon atoms, more preferably alkylene containing 1 to 6 carbon atoms (containing 1, 2, 3, 4, 5 or 6 carbon atoms). Non-limiting examples of alkylene groups include, but are not limited to, methylene(—CH2—), 1,1-ethylidene(—CH(CH3)—), 1,2-ethylidene(—CH2CH2)—, 1,1-propylidene(—CH(CH2CH3)—), 1,2-propylidene(—CH2CH(CH3)—), 1,3-propylidene(—CH2CH2CH2—), 1,4-butylidene(—CH2CH2CH2CH2—), 1,5-butylidene(—CH2CH2CH2CH2CH2—), etc. The alkylene may be substituted or unsubstituted. When substituted, the substituent may be substituted at any available connection site with one or more substituents preferably independently optionally selected from the group consisting of alkyl, alkenyl, alkynyl, alkoxy, alkylthio, alkylamino, halogen, mercapto, hydroxy, nitro, cyano, cycloalkyl, heterocyclyl, aryl, heteroaryl, cycloalkoxy, heterocycloalkoxy, cycloalkylthio, heterocycloalkylthio and oxo.
The term “alkoxy” refers to —O-(alkyl) and —O-(unsubstituted cycloalkyl), wherein the alkyl or cycloalkyl is as defined above. Non-limiting examples of alkoxy include: methoxy, ethoxy, propoxy, butoxy, cyclopropyloxy, cyclobutoxy, cyclopentyloxy, and cyclohexyloxy. Alkoxy may be optionally substituted or unsubstituted, and when it is substituted, the substituent is preferably one or more of the following groups independently selected from the group consisting of: alkyl, alkenyl, alkynyl, alkoxy, alkylthio, alkylamino, halogen, mercapto, hydroxy, nitro, cyano, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, cycloalkoxy, heterocycloalkoxy, cycloalkylthio and heterocycloalkylthio.
The term “cycloalkyl” refers to a saturated or partially unsaturated monocyclic or polycyclic hydrocarbon substituent. The cycloalkyl ring contains 3 to 20 carbon atoms, preferably 3 to 12 carbon atoms, more preferably 3 to 10 carbon atoms, and most preferably 3 to 8 carbon atoms (containing 3, 4, 5, 6, 7 or 8 carbon atoms). Non-limiting examples of monocyclic cycloalkyl include cyclopropyl, cyclobutyl, cyclopentyl, cyclopentenyl, cyclohexyl, cyclohexenyl, cyclohexadienyl, cycloheptyl, cycloheptatrienyl, cyclooctyl, etc. Polycyclic cycloalkyl includes spiro cycloalkyl, fused cycloalkyl, and bridged cycloalkyl.
The term “heterocyclyl” refers to a saturated or partially unsaturated monocyclic or polycyclic hydrocarbon substituent containing 3 to 20 ring atoms, wherein one or more of the ring atoms are heteroatoms selected from the group consisting of nitrogen, oxygen and S(O)m (where m is an integer of 0, 1 or 2), excluding a cyclic portion of —O—O—, —O—S— or —S—S—, and the remaining ring atoms are carbon atoms. It preferably contains 3 to 12 ring atoms, of which 1 to 4 are heteroatoms (1, 2, 3 or 4 heteroatoms); more preferably, a cycloalkyl ring contains 3 to 10 ring atoms (3, 4, 5, 6, 7, 8, 9 or 10 ring atoms). Non-limiting examples of monocyclic heterocyclyl include pyrrolidinyl, piperidinyl, piperazinyl, morpholinyl, thiomorpholinyl, homopiperazinyl, etc. Polycyclic heterocyclyl includes spiro heterocyclyl, fused heterocyclyl, and bridged heterocyclyl.
The term “spiro heterocyclyl” refers to a 5- to 20-membered polycyclic heterocyclyl group in which monocyclic rings share one atom (referred to as the spiro atom), wherein one or more ring atoms are heteroatoms selected from the group consisting of nitrogen, oxygen and S(O)m (where m is an integer from 0 to 2), and the remaining ring atoms are carbon atoms. These rings may contain one or more double bonds, but none of them has a fully conjugated π-electron system. Preferably, the spiro heterocyclyl is 6- to 14-membered, and more preferably 7- to 10-membered. According to the number of spiro atoms shared among the rings, the spiro heterocyclyl may be monospiro heterocyclyl, bispiro heterocyclyl or polyspiro heterocyclyl, preferably monospiro heterocyclyl and bispiro heterocyclyl, and more preferably 4-membered/4-membered, 4-membered/5-membered, 4-membered/6-membered, 5-membered/5-membered or 5-membered/6-membered monospiro heterocyclyl. Non-limiting examples of spiro heterocyclyl include:
The term “fused heterocyclyl” refers to a 5- to 20-membered polycyclic heterocyclyl in which each ring shares a pair of adjacent atoms with the other rings in the system, wherein one or more of the rings may contain one or more double bonds, but none of them has a fully conjugated π-electron system, wherein one or more of the ring atoms are heteroatoms selected from the group consisting of nitrogen, oxygen or S(O)m (where m is an integer of 0, 1 or 2), and the remaining ring atoms are carbon atoms. Preferably, the fused heterocyclyl is 6- to 14-membered, and more preferably 7- to 10-membered (a 7-, 8-, 9- or 10-membered ring). According to the number of the formed rings, the fused heterocyclyl may be bicyclic, tricyclic, tetracyclic or polycyclic, preferably bicyclic or tricyclic, and more preferably 5-membered/5-membered or 5-membered/6-membered bicyclic fused heterocyclyl. Non-limiting examples of fused heterocyclyl include:
The term “bridged heterocyclyl” refers to a 5- to 14-membered polycyclic heterocyclyl in which any two rings share two carbon atoms that are not directly attached to each other, wherein these rings may contain one or more double bonds, but none of them has a fully conjugated π-electron system, wherein one or more of the ring atoms are heteroatoms selected from the group consisting of nitrogen, oxygen and S(O)m (where m is an integer of 0, 1 or 2), and the remaining ring atoms are carbon atoms. Preferably, the fused heterocyclyl is 6- to 14-membered, and more preferably 7- to 10-membered (a 7-, 8-, 9- or 10-membered ring). According to the number of the formed rings, the bridged heterocyclyl may be bicyclic, tricyclic, tetracyclic or polycyclic, preferably bicyclic, tricyclic or tetracyclic, and more preferably bicyclic or tricyclic. Non-limiting examples of bridged heterocyclyl include:
The heterocyclyl ring may be fused to an aryl, heteroaryl or cycloalkyl ring, wherein the ring attached to the parent structure is heterocyclyl; non-limiting examples include, but are not limited to:
Heterocyclyl may be optionally substituted or unsubstituted, and when it is substituted, the substituent is preferably one or more of the following groups independently selected from the group consisting of: alkyl, alkenyl, alkynyl, alkoxy, alkylthio, alkylamino, halogen, mercapto, hydroxy, nitro, cyano, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, cycloalkoxy, heterocycloalkoxy, cycloalkylthio, heterocycloalkylthio and oxo.
The term “aryl” refers to a 6- to 14-membered, preferably 6- to 10-membered (6-, 7-, 8-, 9- or 10-membered), carbon monocyclic or fused polycyclic (i.e., rings sharing a pair of adjacent carbon atoms) group having a conjugated π-electron system such as phenyl and naphthyl, preferably phenyl. The aryl ring may be fused to a heteroaryl, heterocyclyl or cycloalkyl ring, wherein the ring attached to the parent structure is the aryl ring; non-limiting examples include, but are not limited to:
Aryl may be substituted or unsubstituted, and when it is substituted, the substituent is preferably one or more of the following groups independently selected from the group consisting of: alkyl, alkenyl, alkynyl, alkoxy, alkylthio, alkylamino, halogen, mercapto, hydroxy, nitro, cyano, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, cycloalkoxy, heterocycloalkoxy, cycloalkylthio and heterocycloalkylthio.
The term “heteroaryl” refers to a heteroaromatic system containing 1 to 4 heteroatoms (1, 2, 3 or 4 heteroatoms) and 5 to 14 ring atoms, wherein the heteroatoms are selected from the group consisting of oxygen, sulfur and nitrogen. Heteroaryl is preferably 5- to 10-membered (5-, 6-, 7-, 8-, 9-, 10-membered heteroaryl), more preferably 5- or 6-membered, such as furanyl, thienyl, pyridinyl, pyrrolyl, N-alkylpyrrolyl, pyrimidinyl, pyrazinyl, imidazolyl and tetrazolyl. The heteroaryl ring may be fused to an aryl, heterocyclyl or cycloalkyl ring, wherein the ring attached to the parent structure is heteroaryl; non-limiting examples include, but are not limited to:
Heteroaryl may be optionally substituted or unsubstituted, and when it is substituted, the substituent is preferably one or more of the following groups independently selected from the group consisting of: alkyl, alkenyl, alkynyl, alkoxy, alkylthio, alkylamino, halogen, mercapto, hydroxy, nitro, cyano, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, cycloalkoxy, heterocycloalkoxy, cycloalkylthio and heterocycloalkylthio.
The term “amino protecting group” refers to a group that can be easily removed and is intended to protect an amino group from being changed when a reaction is conducted elsewhere in the molecule. Non-limiting examples include 9-fluorenylmethoxycarbonyl, tert-butoxycarbonyl, acetyl, benzyl, allyl, p-methoxybenzyl, etc. These groups may be optionally substituted with 1-3 substituents (1, 2 or 3 substituents) selected from the group consisting of halogen, alkoxy and nitro. The amino protecting group is preferably 9-fluorenylmethoxycarbonyl.
The term “haloalkyl” refers to an alkyl group in which the hydrogen atoms are substituted with one or more halogens, wherein the alkyl group is as defined above. The term “deuterated alkyl” refers to an alkyl group in which the hydrogen atoms are substituted with one or more deuterium atoms, wherein the alkyl group is as defined above.
The term “hydroxyalkyl” refers to an alkyl group wherein the hydrogen of the alkyl group is replaced by one or more hydroxy groups, wherein alkyl is as defined above.
The term “hydroxy” refers to —OH group.
The term “halogen” refers to fluorine, chlorine, bromine or iodine.
The term “amino” refers to —NH2.
The term “nitro” refers to —NO2.
The term “cyano” refers to —CN.
The term “acylamino” refers to —C(O)N(alkyl) or (cycloalkyl), wherein the alkyl and cycloalkyl are as defined above.
The term “optional” or “optionally” means that the event or circumstance subsequently described may, but not necessarily, occur, and that the description includes instances where the event or circumstance occurs or does not occur. For example, “a heterocyclyl group optionally substituted with alkyl” means that alkyl may be, but not necessarily, present, and that the description includes instances where the heterocyclyl group is or is not substituted with alkyl.
“Substituted” means that one or more, preferably up to 5, and more preferably 1, 2 or 3, hydrogen atoms in the group are independently substituted with a substituent. The substituent is only in its possible chemical position, and those skilled in the art will be able to determine (experimentally or theoretically) possible or impossible substitution without undue efforts. For example, it may be unstable when an amino or hydroxy group having a free hydrogen is bound to a carbon atom having an unsaturated (e.g., olefinic) bond.
The term “pharmaceutical composition” refers to a mixture containing one or more of the compounds described herein or a physiologically/pharmaceutically acceptable salt or pro-drug thereof, and other chemical components, and other components for example physiologically/pharmaceutically acceptable carriers and excipients. The purpose of the pharmaceutical composition is to promote the administration to an organism, which facilitates the absorption of the active ingredient, thereby exerting biological activities.
The term “pharmaceutically acceptable salt” refers to a salt of the ligand-drug conjugate of the present disclosure, or a salt of the active compound of the present disclosure. Such salts are safe and effective when used in subjects and possess the required biological activity. The ligand-antibody drug conjugate of the present disclosure contains at least one amino group, and thus can form a salt with an acid. Non-limiting examples of pharmaceutically acceptable salts include: hydrochloride, hydrobromide, hydriodate, sulphate, bisulfate, citrate, acetate, succinate, ascorbate, oxalate, nitrate, sorbate, hydrophosphate, dihydrophosphate, salicylate, hydrocitrate, tartrate, maleate, fumarate, formate, benzoate, mesylate, ethanesulfonate, benzenesulphonate and p-toluenesulfonate.
In one embodiment of the present disclosure, the cytotoxic drug is conjugated to a mercapto group of the antibody by a linker unit.
The loading of the ligand-cytotoxic drug conjugate can be controlled using the following non-limiting methods, including:
(1) controlling a molar ratio of a linking reagent to a monoclonal antibody,
(2) controlling reaction time and temperature, and
(3) selecting different reagents.
For preparation of conventional pharmaceutical compositions, reference is made to Chinese Pharmacopoeia.
The term “pharmaceutically acceptable carrier” for the drug of the present disclosure refers to a system that can alters the manner in which the drug gets into a subject and the distribution of the drug in the subject, controls the release rate of the drug, and delivers the drug to a targeted organ. The drug carrier release and targeted system can reduce drug degradation and loss, reduce side effects and improve bioavailability. For example, polymeric surfactants that can be used as carriers can self-assemble due to their unique amphiphilic structures to form various forms of aggregates, such as micelles, microemulsions, gels, liquid crystals and vesicles, as preferred examples. The aggregates have the capability of encapsulating drug molecules and have good permeability for membranes, and therefore can be used as excellent drug carriers.
The term “excipient” is an addition, apart from the active compound, to a pharmaceutical composition. It may also be referred to as an adjuvant. For example, binders, fillers, disintegrants, lubricants in tablets; base part in semisolid ointment and cream preparations; preservatives, antioxidants, corrigents, fragrances, cosolvents, emulsifiers, solubilizers, tonicity adjusting agents, colorants and the like in liquid formulations can all be referred to as excipients.
The term “diluent”, also referred to as a filler, is used primarily to increase the weight and volume of the tablet. The addition of the diluent not only ensures a certain volume, but also reduces the dose deviation of the main ingredients, and improves the drug's compression moldability and the like. When the drug in tablet form contains oily components, an absorbent is necessarily added to absorb the oily components so as to maintain a “dry” state and thus to facilitate the preparation of the tablet. Examples include starch, lactose, inorganic salts of calcium, microcrystalline cellulose and the like.
The pharmaceutical composition may be in the form of a sterile injectable aqueous solution. Available and acceptable vehicles or solvents include water, Ringer's solution and isotonic sodium chloride solution. The sterile injectable formulation may be a sterile injectable oil-in-water microemulsion in which the active ingredient is dissolved in the oil phase. For example, the active ingredient is dissolved in a mixture of soybean oil and lecithin. The oil solution is then added to a mixture of water and glycerol and treated to form a microemulsion. The injection or microemulsion can be locally injected into the bloodstream of a subject in large quantities. Alternatively, it may be desirable to administer the solution and microemulsion in such a way as to maintain a constant circulating concentration of the compound of the present disclosure. To maintain such a constant concentration, a continuous intravenous delivery device may be used. An example of such a device is a Deltec CADD-PLUS™ 5400 intravenous injection pump.
The pharmaceutical composition may be in the form of a sterile injectable aqueous or oily suspension for intramuscular and subcutaneous administration. The suspension can be prepared according to the prior art using those suitable dispersants or wetting agents and suspending agents mentioned above. The sterile injectable formulation may also be a sterile injection or suspension prepared in a parenterally acceptable non-toxic diluent or solvent, e.g., a solution prepared in 1,3-butanediol. In addition, a sterile fixed oil may be conventionally used as a solvent or a suspending medium. For this purpose, any blend fixed oil including synthetic mono- or di-glycerides can be used. In addition, fatty acids such as oleic acid may also be used in the preparation of injections.
For the synthesis purpose, the following technical schemes for synthesis are adopted:
A method for preparing a compound of general formula (Pc-La-Y-D) comprises the following steps:
subjecting reduced Pc and general formula (La-Y-D) to a coupling reaction to give a compound of general formula (Pc-La-Y-D), wherein the reducing agent is preferably TCEP; particularly, the disulfide bonds in the antibody are preferably reduced; Pc, W, L2, L3, R1, R2, R5-R7, m and n are as defined in general formula (Pc-La-Y-D).
One or more embodiments of the present disclosure are described in detail in the specification above. Although any methods and materials similar or identical to those described herein can also be used to implement or test the present disclosure, preferred methods and materials are described below. Other features, objects and advantages of the present disclosure will be apparent from the description and the claims. In the specification and claims, singular forms include plural referents unless otherwise indicated clearly in the context. Unless otherwise defined, all technical and scientific terms used herein have the meanings generally understood by those of ordinary skill in the art to which the present disclosure belongs. All the patents and publications cited in the specification are incorporated by reference. The following examples are set forth in order to more fully illustrate the preferred embodiments of the present disclosure. These examples should not be construed in any way as limiting the scope of the present disclosure, which is defined by the claims.
pCDH-hClaudin18.2 lentiviral expression vector plasmids, pVSV-G and pCMV-dR8.91 lentiviral system packaging vectors were transfected into viral packaging cells 293T using Lipofectamine 3000 transfection reagent. The medium supernatant containing viruses was collected, filtered, and centrifuged at ultra-high speed. The human gastric signet ring cell carcinoma cell strain NUGC4 was allowed to be infected with the concentrated virus, screened using puromycin for two to three weeks, and subjected to FACS single-cell sorting.
Claudin18.2 expression levels were determined according to tumor IHC scores. Cells with claudin18.2 expression levels similar to that of a tumor with a tumor IHC score of 3 points were considered cells with high expression, and cells with claudin18.2 expression levels similar to that of a tumor with a tumor IHC score of 2 points were considered cells with moderate expression. According to the claudin18.2 expression level on the NUGC4 cell surface determined by FACS, NUGC4/hClaudin18.2 monoclonal cell strains with high claudin18.2 expression were selected. The claudin18.2 expression level on the wild-type NUGC4 cell surface was also determined by FACS, and NUGC4 clonal cell strains with moderate claudin18.2 expression were selected. The wild-type NUGC4 cells were cells with low claudin18.2 expression.
The selected monoclonal cell strains were expanded and preserved by freezing for subsequent experiments.
Anti-human claudin18.2 monoclonal antibodies were produced by immunizing mice. Laboratory SJL white mice, female, 6-8 weeks of age (Beijing Vital River Laboratory Animal Technology Co., Ltd., animal production license number: SCXK(Beijing)2012-0001). Housing environment: SPF grade. The purchased mice were housed in a laboratory environment for 1 week, in a 12/12 hour light/dark cycle, at a temperature of 20-25° C., with humidity at 40-60%. The acclimatized mice were immunized according to the following scheme. The antigens for immunization were huClaudin18.2-HEK293 cells (a HEK-293 cell strain stably transfected with human claudin18.2 plasmid).
Immunization scheme: Prior to the first cell immunization, each mouse was intraperitoneally (IP) injected with 0.1 mL of TiterMax® Gold Adjuvant (Sigma Cat No. T2684), and, a half hour later, with 0.1 mL of normal saline-diluted cellular fluid at a concentration of 1×108/mL. The cells were uniformly pipetted, and then inoculation was performed at days 0, 14, 28, 42 and 56. Blood was collected at days 21, 35, 49 and 63, and the antibody titer in mouse serum was determined by ELISA. After 4-5 immunizations, mice in which the antibody titer in serum was high and was reaching a plateau were selected for splenocyte fusion. The mice were immunized with a booster dose of 1×107 cells by intraperitoneal injection (IP) 3 days prior to splenocyte fusion.
Spleen lymphocytes and myeloma cells, Sp2/0 cells (ATCC® CRL-8287™) were fused by following an optimized PEG-mediated fusion procedure to give hybridoma cells. The resulting hybridoma cells were resuspended in complete medium (IMDM medium containing 20% FBS, 1×HAT and 1×OPI) at a density of 0.5-1×106/mL and seeded in a 96-well plate at 100 μL/well. The plate was incubated at 37° C. with 5% CO2 for 3-4 days, supplemented with HAT complete medium at 100 μL/well, and incubated for another 3-4 days to form pinpoint-like clones. The supernatant was removed and HT complete medium (IMDM medium containing 20% FBS, 1×HT and 1×OPI) was added at 200 μL/well. The plate was incubated at 37° C. with 5% CO2 for 3 days, followed by an ELISA assay.
Hybridoma culture supernatants were assayed using a combined ELISA method according to the density the hybridoma cells were growing at. Cells that had good binding capacity to huClaudin18.2-HEK293 cells but were not bound to HEK293 were selected, expanded, and frozen. Subcloning was performed 2 to 3 times to obtain single-cell clones.
A cell binding assay was also performed for each cell subcloning. Hybridoma clones were obtained by the above screening process, and antibodies were further prepared using a serum-free cell culture method. The antibodies were purified, according to the purification example, for use in the test examples.
Monoclonal hybridoma cell strains mAb1901 and mAb1902 with high in vitro activity were selected. The monoclonal antibody sequences therein were cloned, followed by humanization, recombinant expression and activity evaluation.
The cloning of sequences from hybridomas is as follows. Hybridoma cells growing at log phase were harvested, and the RNA was extracted using Trizol (Invitrogen, 15596-018) (following the procedures in the kit instructions) and reverse transcribed (PrimeScript™ Reverse Transcriptase, Takara, cat #2680A). The cDNA obtained by reverse transcription was amplified by PCR using mouse Ig-Primer Set (Novagen, TB326 Rev.B 0503) and then sent for sequencing by a sequencing company. The amino acid sequences corresponding to the obtained DNA sequences of the hybridoma cells are set forth in SEQ ID NO: 3-6:
The above murine heavy chain and light chain variable regions were joined to the heavy chain constant region of human IgG1 antibody and the human κ light chain constant region described below, respectively, to form chimeric antibodies ch1901 and ch1902.
The constant regions were selected from the group consisting of the following sequences:
Humanization of the murine monoclonal antibodies was performed as described in many publications in the art. Briefly, human constant domains were used in place of parent (murine antibody) constant domains, and human germline antibody sequences were selected, based on the homology of the murine and human antibodies, for CDR grafting. The present invention selects candidate molecules with good activity for humanization, and the results are as follows.
The amino acid residues of the VH/VL CDRs in Table 1 were identified using the Kabat numbering system and annotated.
The CDR sequences of the murine antibodies are described in Table 1:
On the basis of the typical structure of the murine antibody VH/VLCDR obtained, the heavy chain and light chain variable region sequences were compared with an antibody Germine database to obtain a human germline template with high homology. The human germline light chain framework region was derived from a human κ light chain gene.
2.1. Humanization of mAb1901 and Reverse Mutation Design
A suitable human antibody germline was selected to perform humanization on mAb1901 murine antibody. The CDRs of murine antibody mAb1901 were grafted into the selected humanization template to replace humanized variable regions, followed by recombination with an IgG constant region to form a complete antibody. Meanwhile, reverse mutations were introduced into the FR region in the V region of the humanized antibody. Exemplary reverse mutations and combinations thereof are as follows:
The corresponding heavy chain variable region in the table above was joined to the human IgG1 heavy chain constant region set forth in SEQ ID NO: 7 to form a heavy chain of a full-length antibody, and the light chain variable region was joined to the human κ light chain constant region set forth in SEQ ID NO: 8 to form a light chain of a full-length antibody. In other embodiments, the heavy chain variable region and the light chain variable region may also be joined to other heavy chain constant regions and light chain constant regions, respectively, to form a full-length antibody.
2.2. Humanization of mAb1902 and Reverse Mutation Design
A suitable human antibody germline was selected to perform humanization on mAb1902 murine antibody. The CDRs of murine antibody mAb1902 were grafted into the selected humanization template to replace humanized variable regions, followed by recombination with an IgG constant region to form a complete antibody. Meanwhile, reverse mutations were introduced into the FR region in the V region of the humanized antibody. Exemplary reverse mutations and combinations thereof are as follows:
The corresponding heavy chain variable region in the table above was Joined to the human IgG1 heavy chain constant region set forth in SEQ ID NO: 7 to form a heavy chain of a full-length antibody, and the light chain variable region was joined to the human κ light chain constant region set forth in SEQ ID NO: 8 to form a light chain of a full-length antibody.
Chimeric Antibody ch1901
Table 6 shows the humanized antibodies of mAb1901:
Note: In the table, the humanized antibody h1901-1 has the heavy chain H1 and the light chain L1. This applies to other humanized antibodies. The full-length antibody light chain and heavy chain sequences of the humanized antibodies of mAb1901 are shown in Table 7 below:
Table 8 shows the humanized antibodies of mAb1902:
The light chain and heavy chain sequences of the humanized antibodies of mAb1902 are shown in Table 9 below:
A positive control antibody of the present disclosure is IMAB-362 (from WO2016166122)
The above antibodies were cloned, expressed and purified using conventional gene cloning and recombinant expression methods.
Experimental procedures without conditions specified in the examples of the present disclosure, are generally conducted according to conventional conditions, or according to conditions recommended by the manufacturer of the starting materials or commercial products. Reagents without specific origins indicated are commercially available conventional reagents.
The structures of the compounds were determined by nuclear magnetic resonance (NMR) or mass spectrometry (MS). NMR spectra were measured using a Bruker AVANCE-400 nuclear magnetic resonance instrument, with deuterated dimethyl sulfoxide (DMSO-d6), deuterated chloroform (CDCl3) and deuterated methanol (CD3OD) as solvents, and tetramethylsilane (TMS) as internal standard. Chemical shifts are given in unit of 10−6 (ppm).
MS analysis was performed using a FINNIGAN LCQAd (ESI) mass spectrometer (manufacturer: Thermo, model: Finnigan LCQ advantage MAX).
UPLC analysis was performed using a Waters Acquity UPLC SQD liquid chromatography-mass spectrometry system.
HPLC analysis was performed using an Agilent 1200DAD high pressure liquid chromatograph (Sunfire C18 150×4.6 mm chromatography column) and a Waters 2695-2996 high pressure liquid chromatograph (Gimini C18 150×4.6 mm chromatography column).
UV-HPLC analysis was performed using a Thermo nanodrop2000 ultraviolet spectrophotometer.
Proliferation inhibition rates and IC50 values were measured using a PHERA starFS microplate reader (BMG, Germany).
Huanghai HSGF254 or Qingdao GF254 silica gel plates of specifications 0.15 mm to 0.2 mm were adopted for thin layer chromatography (TLC) analysis and 0.4 mm to 0.5 mm for TLC separation and purification.
Yantai Yellow Sea silica gel of 200-300 mesh is generally used as a carrier in column chromatography.
Known starting materials of the present disclosure may be synthesized using or according to methods known in the art, or may be purchased from ABCR GmbH & Co. KG, Acros Organnics, Aldrich Chemical Company, Accela ChemBio Inc, Chembee Chemicals, etc.
In the examples, the reactions were all performed in an argon atmosphere or a nitrogen atmosphere unless otherwise specified.
The argon atmosphere or nitrogen atmosphere means that the reaction flask is connected to a balloon containing about 1 L of argon or nitrogen.
A hydrogen atmosphere means that the reaction flask is connected to a balloon containing about 1 L of hydrogen.
Parr 3916EKX hydrogenator, Qinglan QL-500 hydrogenator or HC2-SS hydrogenator was used in pressurized hydrogenation reactions.
The hydrogenation reaction usually involves 3 cycles of vacuumization and hydrogen purge.
A CEM Discover-S 908860 microwave reactor was used in microwave reactions.
In the examples, the solution in the reaction refers to an aqueous solution unless otherwise stated.
In the examples, the reaction temperature is room temperature unless otherwise stated.
The room temperature is the optimum reaction temperature, which ranges from 20° C. to 30° C.
Preparation of PBS buffer at pH 6.5 in examples: 8.5 g of KH2PO4, 8.56 g of K2HPO4.3H2O, 5.85 g of NaCl, and 1.5 g of EDTA were added to a flask, and the volume was brought to 2 L. The additions were all ultrasonically dissolved, and the solution was well mixed by shaking to give the desired buffer.
The eluent system for column chromatography and the developing solvent system for thin layer chromatography used for compound purification include: A: dichloromethane and isopropanol system, B: dichloromethane and methanol system, and C: petroleum ether and ethyl acetate system. The volume ratio of solvents was adjusted according to the polarity of the compound, or by adding a small amount of triethylamine and acidic or basic reagent.
Some of the compounds of the present disclosure are characterized by Q-TOF LC/MS. Q-TOF LC/MS analysis used an Agilent 6530 accurate-mass quadrupole time-of-flight mass spectrometer and an Agilent 1290-Infinity ultra-high performance liquid chromatograph (Agilent Poroshell 300SB-C8 5 μm, 2.1×75 mm chromatography column).
See PCT/CN2019/107873 for the Y-D drug portion of the antibody-drug conjugates of the present disclosure, and the synthesis and tests of relevant compounds are incorporated herein by reference. Non-limiting examples of synthesis are incorporated by reference as follows:
To exatecan mesylate 1b (2.0 mg, 3.76 μmol, prepared as disclosed in Patent Application “EP0737686A1”) was added 1 mL of N,N-dimethylformamide. The mixture was cooled to 0-5° C. in an ice-water bath, and a drop of triethylamine was added. The reaction was stirred until it became clear. To the reaction mixture were successively added 1-hydroxycyclopropylcarboxylic acid 1a (1.4 mg, 3.7 μmol, prepared using known method “Tetrahedron Letters, 25(12), 1269-72; 1984”) and 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride (3.8 mg, 13.7 μmol). After addition, the reaction mixture was stirred at 0-5° C. for 2 h, quenched with 5 mL of water, and extracted with ethyl acetate (8 mL×3). The organic phases were combined, washed with saturated sodium chloride solution (5 mL×2), dried over anhydrous sodium sulfate, and filtered. The filtrate was concentrated under reduced pressure, and the resulting residue was purified by thin layer chromatography with developing solvent system B to give the title product 1 (1.6 mg, 82.1% yield).
MS m/z (ESI): 520.2 [M+1]
1H NMR (400 MHz, CDCl3): δ 7.90-7.84 (m, 1H), 7.80-7.68 (m, 1H), 5.80-5.70 (m, 1H), 5.62-5.54 (m, 2H), 5.44-5.32 (m, 2H), 5.28-5.10 (m, 2H), 3.40-3.15 (m, 3H), 2.44 (s, 3H), 2.23 (t, 1H), 2.06-1.75 (m, 2H), 1.68-1.56 (m, 1H), 1.22-1.18 (m, 2H), 1.04-0.98 (m, 2H), 0.89 (t, 3H).
To 1b (4 mg, 7.53 μmol) were added 2 mL of ethanol and 0.4 mL of N,N-dimethylformamide. The system was purged with argon three times, and the mixture was cooled to 0-5° C. in an ice-water bath, followed by dropwise addition of 0.3 mL of N-methylmorpholine. The reaction mixture was stirred until it became clear. To the reaction mixture were successively added 2-cyclopropyl-2-hydroxyacetic acid 2a (2.3 mg, 19.8 μmol, prepared as disclosed in Patent Application “WO2013106717”), 1-hydroxybenzotriazole (3 mg, 22.4 μmol) and 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride (4.3 mg, 22.4 μmol). After addition, the reaction mixture was stirred at 0-5° C. for 1 h. The ice-water bath was removed, and the reaction mixture was heated to 30° C., stirred for 2 h, and concentrated under reduced pressure. The resulting crude compound 2 was purified by high performance liquid chromatography (separation conditions: chromatography column: XBridge Prep C18 OBD 5 μm 19×250 mm; mobile phase: A-water (10 mmol of NH4OAc), B-acetonitrile, gradient elution, flow rate: 18 mL/min), and the corresponding fractions were collected and concentrated under reduced pressure to give the title product (2-A: 1.5 mg, 2-B: 1.5 mg).
MS m/z (ESI): 534.0 [M+1].
UPLC analysis: retention time: 1.06 min; purity: 88% (chromatography column: ACQUITY UPLC BEHC18 1.7 μm 2.1×50 mm; mobile phase: A-water (5 mmol of NH4OAc), B-acetonitrile).
1H NMR (400 MHz, DMSO-d6): δ 8.37 (d, 1H), 7.76 (d, 1H), 7.30 (s, 1H), 6.51 (s, 1H), 5.58-5.56 (m, 1H), 5.48 (d, 1H), 5.41 (s, 2H), 5.32-5.29 (m, 2H), 3.60 (t, 1H), 3.19-3.13 (m, 1H), 2.38 (s, 3H), 2.20-2.14 (m, 1H), 1.98 (q, 2H), 1.87-1.83 (m, 1H), 1.50-1.40 (m, 1H), 1.34-1.28 (m, 1H), 0.86 (t, 3H), 0.50-0.39 (m, 4H).
CPLC analysis: retention time: 1.10 min; purity: 86% (chromatography column: ACQUITY UPLC BEHC18 1.7 μm 2.1×50 mm; mobile phase: A-water (5 mmol of NH4OAc), B-acetonitrile).
1H NMR (400 MHz, DMSO-d6): δ 8.35 (d, 1H), 7.78 (d, 1H), 7.31 (s, 1H), 6.52 (s, 1H), 5.58-5.53 (m, 1H), 5.42 (s, 2H), 5.37 (d, 1H), 5.32 (t, 1H), 3.62 (t, 1H), 3.20-3.15 (m, 2H), 2.40 (s, 3H), 2.25-2.16 (m, 1H), 1.98 (q, 2H), 1.87-1.82 (m, 1H), 1.50-1.40 (m, 1H), 1.21-1.14 (m, 1H), 0.87 (t, 3H), 0.47-0.35 (m, 4H).
To 1b (5.0 mg, 9.41 μmol) were added 2 mL of ethanol and 0.4 mL of N,N-dimethylformamide, and the mixture was cooled to 0-5° C. in an ice-water bath, followed by dropwise addition of 0.3 mL of N-methylmorpholine. The reaction mixture was stirred until it became clear. To the reaction mixture were successively added 3,3,3-trifluoro-2-hydroxypropionic acid 3a (4.1 mg, 28.4 μmol, supplied by Alfa), 1-hydroxybenzotriazole (3.8 mg, 28.1 μmol) and 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride (5.4 mg, 28.2 μmol). After addition, the reaction mixture was stirred at 0-5° C. for 10 min. The ice-water bath was removed, and the reaction mixture was heated to 30° C., stirred for 8 h, and concentrated under reduced pressure. The resulting crude compound 3 was purified by high performance liquid chromatography (separation conditions: chromatography column: XBridge Prep C18 OBD 5 μm 19×250 mm; mobile phase: A-water (10 mmol of NH4OAc), B-acetonitrile, gradient elution, flow rate: 18 mL/min), and the corresponding fractions were collected and concentrated under reduced pressure to give the title product (3-A: 1.5 mg, 3-B: 1.5 mg).
MS m/z (ESI): 561.9 [M+1].
UPLC analysis: retention time: 1.11 min; purity: 88% (chromatography column: ACQUITY UPLC BEHC18 1.7 μm 2.1×50 mm; mobile phase: A-water (5 mmol of NH4OAc), B-acetonitrile).
1H NMR (400 MHz, DMSO-d6): δ 8.94 (d, 1H), 7.80 (d, 1H), 7.32 (s, 1H), 7.20 (d, 1H), 6.53 (s, 1H), 5.61-5.55 (m, 1H), 5.45-5.23 (m, 3H), 5.15-5.06 (m, 1H), 4.66-4.57 (m, 1H), 3.18-3.12 (m, 1H), 2.40 (s, 3H), 2.26-2.20 (m, 1H), 2.16-2.08 (m, 1H), 2.02-1.94 (m, 1H), 1.89-1.82 (m, 1H), 1.50-1.40 (m, 1H), 0.87 (t, 3H).
UPLC analysis: retention time: 1.19 min; purity: 90% (chromatography column: ACQUITY UPLC BEHC18 1.7 μm 2.1×50 mm; mobile phase: A-water (5 mmol of NH4OAc), B-acetonitrile).
1H NMR (400 MHz, DMSO-d6): δ 8.97 (d, 1H), 7.80 (d, 1H), 7.31 (s, 1H), 7.16 (d, 1H), 6.53 (s, 1H), 5.63-5.55 (m, 1H), 5.45-5.20 (m, 3H), 5.16-5.07 (m, 1H), 4.66-4.57 (m, 1H), 3.18-3.12 (m, 1H), 2.40 (s, 3H), 2.22-2.14 (m, 1H), 2.04-1.95 (m, 2H), 1.89-1.82 (m, 1H), 1.50-1.40 (m, 1H), 0.87 (t, 3H).
To 1b (3.0 mg, 5.64 μmol) was added 1 mL of N,N-dimethylformamide. The mixture was cooled to 0-5° C. in an ice-water bath, and a drop of triethylamine was added. The reaction mixture was stirred until it became clear. To the reaction mixture were successively added 1-hydroxy-cyclopentanecarboxylic acid 4a (2.2 mg, 16.9 μmol, prepared as disclosed in Patent Application “WO2013106717”) and 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride (4.7 mg, 16.9 μmol). After addition, the reaction mixture was stirred at 0-5° C. for 1 h, quenched with 5 mL of water, and extracted with ethyl acetate (10 mL×3). The organic phases were combined, washed with saturated sodium chloride solution (5 mL×2), dried over anhydrous sodium sulfate, and filtered. The filtrate was concentrated under reduced pressure, and the resulting residue was purified by thin layer chromatography with developing solvent system B to give the title product 4 (2.5 mg, 80.9% yield).
MS m/z (ESI): 548.0 [M+1].
1H NMR (400 MHz, CDCl3): δ 7.73-7.62 (m, 2H), 5.75-5.62 (m, 1H), 5.46-5.32 (m, 2H), 5.26-5.10 (m, 1H), 3.30-3.10 (m, 1H), 2.43 (s, 3H), 2.28-2.20 (m, 2H), 2.08-1.84 (m, 8H), 1.69-1.58 (m, 2H), 1.04-1.00 (m, 2H), 0.89 (t, 3H).
To 1b (2.0 mg, 3.76 μmol) was added 1 mL of N,N-dimethylformamide. The mixture was cooled to 0-5° C. in an ice-water bath, and a drop of triethylamine was added. The reaction mixture was stirred until it became clear. To the reaction mixture were successively added 1-(hydroxymethyl)-cyclopentanecarboxylic acid 5a (0.87 mg, 7.5 μmol, prepared as disclosed in Patent Application “WO201396771”) and 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride (2 mg, 7.24 μmol). After addition, the reaction mixture was stirred at 0-5° C. for 2 h, quenched with 5 mL of water, and extracted with ethyl acetate (8 mL×3). The organic phases were combined, washed with saturated sodium chloride solution (5 mL×2), dried over anhydrous sodium sulfate, and filtered. The filtrate was concentrated under reduced pressure, and the resulting residue was purified by thin layer chromatography with developing solvent system B to give the title product 5 (1.0 mg, 50% yield).
MS m/z (ESI): 533.9 [M+1].
1H NMR (400 MHz, CDCl3): δ 8.07 (s, 1H), 7.23-7.18 (m, 2H), 6.71-6.64 (m, 1H), 6.55-6.51 (m, 1H), 5.36-5.27 (m, 2H), 4.67-4.61 (m, 2H), 3.53-3.48 (m, 1H), 3.30-3.22 (m, 2H), 3.18-3.13 (m, 1H), 2.71-2.61 (m, 2H), 2.35-2.28 (m, 1H), 2.04-1.91 (m, 4H), 1.53-1.40 (m, 3H), 0.91-0.75 (m, 4H).
To 1b (3.0 mg, 5.64 μmol) was added 1 mL of N,N-dimethylformamide. The mixture was cooled to 0-5° C. in an ice-water bath, and a drop of triethylamine was added. The reaction mixture was stirred until it became clear. To the reaction mixture were successively added 1-(hydroxymethyl)cyclobutane-1-carboxylic acid 6a (2.2 mg, 16.9 μmol, prepared as disclosed in “Journal of the American Chemical Society, 2014, vol. 136, #22, p. 8138-8142”) and 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride (4.7 mg, 16.9 μmol). After addition, the reaction mixture was stirred at 0-5° C. for 1 h, quenched with 5 mL of water, and extracted with ethyl acetate (10 mL×3). The organic phases were combined, washed with saturated sodium chloride solution (5 mL×2), dried over anhydrous sodium sulfate, and filtered. The filtrate was concentrated under reduced pressure, and the resulting residue was purified by thin layer chromatography with developing solvent system B to give the title product 6 (2.1 mg, 67.9% yield).
MS m/z (ESI): 548.0 [M+1].
1H NMR (400 MHz, DMSO-d6): δ 7.85-7.62 (m, 1H), 6.88 (br, 1H), 5.87-5.48 (m, 2H), 5.47-5.33 (m, 1H), 5.31-5.06 (m, 1H), 4.25-3.91 (m, 2H), 3.25 (br, 1H), 2.60-2.32 (m, 3H), 2.23 (t, 1H), 2.15-1.95 (m, 3H), 1.70-1.56 (m, 2H), 1.41-1.17 (m, 9H), 1.03 (s, 1H), 0.95-0.80 (m, 2H).
To 1b (3.0 mg, 5.64 μmol) were added 2 mL of ethanol and 0.4 mL of N,N-dimethylformamide, and the mixture was cooled to 0-5° C. in an ice-water bath, followed by dropwise addition of 0.3 mL of N-methylmorpholine. The reaction mixture was stirred until it became clear. To the reaction mixture were successively added 1-hydroxycyclobutanecarboxylic acid 7a (2.0 mg, 17.22 μmol, supplied by PharmaBlock), 1-hydroxybenzotriazole (2.3 mg, 17.0 μmol) and 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride (3.2 mg, 16.7 μmol). After addition, the reaction mixture was stirred at 0-5° C. for 10 min. The ice-water bath was removed, and the reaction mixture was stirred at room temperature for 2 h and concentrated under reduced pressure. The resulting residue was purified by thin layer chromatography with developing solvent system B to give the title product 7 (2.5 mg, 83.1% yield).
MS m/z (ESI): 534.0 [M+1].
1H NMR (400 MHz, DMSO-d6): δ 8.28 (d, 1H), 7.75 (d, 1H), 7.29 (s, 1H), 6.51 (s, 1H), 6.12 (s, 1H), 5.59-5.51 (m, 1H), 5.41 (s, 2H), 5.20-5.01 (m, 2H), 3.27-3.17 (m, 1H), 3.15-3.05 (m, 1H), 2.71-2.63 (m, 1H), 2.37 (s, 3H), 2.12-2.05 (m, 1H), 2.03-1.94 (m, 2H), 1.92-1.78 (m, 4H), 1.50-1.42 (m, 1H), 0.90-0.83 (m, 4H).
Benzyl 1-hydroxycyclopropane-1-carboxylate 8a (104 mg, 0.54 mmol; prepared as disclosed in Patent Application “US2005/20645”) and 2-((((9H-fluoren-9-yl)methoxy)carbonyl)amino)acetamido)methyl acetate 8b (100 mg, 0.27 mmol; prepared as disclosed in Patent Application “CN105829346A”) were added to a reaction flask, and 5 mL of tetrahydrofuran was added. The system was purged with argon three times, and the mixture was cooled to 0-5° C. in an ice-water bath, followed by addition of potassium tert-butoxide (61 mg, 0.54 mmol). The ice bath was removed, and the reaction mixture was warmed to room temperature and stirred for 10 min, followed by addition of 20 mL of ice water and by extraction with ethyl acetate (5 mL×2) and chloroform (5 mL×5). The organic phases were combined and concentrated. The resulting residue was dissolved in 3 mL of 1,4-dioxane, followed by addition of 0.6 mL of water, sodium bicarbonate (27 mg, 0.32 mmol) and 9-fluorenylmethyl chloroformate (70 mg, 0.27 mmol). The mixture was stirred at room temperature for 1 h. 20 mL of water was added, followed by extraction with ethyl acetate (8 mL×3). The organic phase was washed with saturated sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, and filtered. The filtrate was concentrated under reduced pressure, and the resulting residue was purified by silica gel column chromatography with developing solvent system B to give the title product 8c (100 mg, 73.6% yield).
MS m/z (ESI): 501.0 [M+1].
8c (50 mg, 0.10 mmol) was dissolved in 3 mL of a solvent mixture of tetrahydrofuran and ethyl acetate (V:V=2:1), and palladium on carbon (25 mg, 10% loading) was added. The system was purged with hydrogen three times, and the reaction mixture was stirred at room temperature for 1 h. The reaction mixture was filtered through celite, and the filter cake was rinsed with tetrahydrofuran. The filtrate was concentrated to give the title product 8d (41 mg, 100% yield).
MS m/z (ESI): 411.0 [M+1].
1b (7 mg, 0.013 mmol) was added to a reaction flask, and 1 mL of N,N-dimethylformamide was added. The system was purged with argon three times, and the mixture was cooled to 0-5° C. in an ice-water bath, followed by addition of a drop of triethylamine, a solution of 8d (7 mg, 0.017 mmol) in 0.5 mL of N,N-dimethylformamide, and 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride (7 mg, 0.026 mmol). The reaction mixture was stirred in an ice bath for 35 min. 10 mL of water was added, followed by extraction with ethyl acetate (5 mL×3). The organic phase was washed with saturated sodium chloride solution (10 mL), dried over anhydrous sodium sulfate, and filtered. The filtrate was concentrated under reduced pressure, and the resulting residue was purified by thin layer chromatography with developing solvent system B to give the title product 8e (8.5 mg, 78.0% yield).
MS m/z (ESI): 828.0 [M+1].
8e (4 mg, 4.84 μmol) was dissolved in 0.2 mL of dichloromethane, and 0.1 mL of diethylamine was added. The reaction mixture was stirred at room temperature for 2 h and concentrated under reduced pressure. 2 mL of toluene was added, followed by concentration under reduced pressure; the procedures were repeated twice. The residue was slurried with 3 mL of n-hexane, and the upper n-hexane layer was removed; the procedures were repeated three times. The slurry was concentrated under reduced pressure to give the crude title product 8f (2.9 mg), which was directly used in the next step without purification.
MS m/z (ESI): 606.0 [M+1].
Crude 8f (2.9 mg, 4.84 μmol) was dissolved in 0.5 mL of N,N-dimethylformamide. The system was purged with argon three times, and the solution was cooled to 0-5° C. in an ice-water bath. A solution of (S)-2(-2-(-2-(6-(2,5-dioxo-1H-pyrrol-1-yl) hexanamido)acetylamino)acetylamino)-3-phenylpropionic acid 8g (2.7 mg, 5.80 μmol, prepared as disclosed in Patent Application “EP2907824”) in 0.3 mL of N,N-dimethylformamide was added, followed by addition of 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride (2.7 mg, 9.67 μmol). The reaction mixture was stirred in an ice bath for 30 min. Then, the ice bath was removed, and the reaction mixture was warmed to room temperature, stirred for 15 min, and purified by high performance liquid chromatography (separation conditions: chromatography column: XBridge Prep C18 OBD 5 μm 19×250 mm; mobile phase: A-water (10 mmol of NH4OAc), B-acetonitrile, gradient elution, flow rate: 18 mL/min). The corresponding fractions were collected and concentrated under reduced pressure to give the title product 8 (2 mg, 39.0% yield).
MS m/z (ESI): 1060.0 [M+1].
1H NMR (400 MHz, DMSO-d6): δ 9.01 (d, 1H), 8.77 (t, 1H), 8.21 (t, 1H), 8.08-7.92 (m, 2H), 7.73 (d, 1H), 7.28 (s, 1H), 7.24-7.07 (m, 4H), 6.98 (s, 1H), 6.50 (s, 1H), 5.61 (q, 1H), 5.40 (s, 2H), 5.32 (t, 1H), 5.12 (q, 2H), 4.62 (t, 1H), 4.52 (t, 1H), 4.40-4.32 (m, 1H), 3.73-3.47 (m, 8H), 3.16-3.04 (m, 2H), 2.89 (dd, 1H), 2.69-2.55 (m, 2H), 2.37-2.23 (m, 4H), 2.12-1.93 (m, 4H), 1.90-1.74 (m, 2H), 1.52-1.38 (m, 4H), 1.33-1.11 (m, 5H), 0.91-0.81 (in, 4H).
2a (1.3 g, 11.2 mmol; prepared as disclosed in Patent Application “WO2013/106717”) was dissolved in 50 mL of acetonitrile, and potassium carbonate (6.18 g, 44.8 mmol), benzyl bromide (1.33 mL, 11.2 mmol) and tetrabutylammonium iodide (413 mg, 1.1 mmol) were successively added. The reaction mixture was stirred at room temperature for 48 h and filtered through celite, and the filter cake was rinsed with ethyl acetate (10 mL). The filtrates were combined and concentrated under reduced pressure, and the resulting residue was purified by silica gel column chromatography with developing solvent system C to give the title product 9a (2 g, 86.9% yield).
9a (120.9 mg, 0.586 mmol) and 8b (180 mg, 0.489 mmol) were added to a reaction flask, and 4 mL of tetrahydrofuran was added. The system was purged with argon three times, and the reaction mixture was cooled to 0-5° C. in an ice-water bath, followed by addition of potassium tert-butoxide (109 mg, 0.98 mmol). The ice bath was removed, and the reaction mixture was warmed to room temperature and stirred for 40 min, followed by addition of 10 mL of ice water and by extraction with ethyl acetate (20 mL×2) and chloroform (10 mL×5). The organic phases were combined and concentrated. The resulting residue was dissolved in 4 mL of dioxane, and 2 mL of water, sodium bicarbonate (49.2 mg, 0.586 mmol) and 9-fluorenylmethyl chloroformate (126 mg, 0.49 mmol) were added. The mixture was stirred at room temperature for 2 h. 20 mL of water was added, followed by extraction with ethyl acetate (10 mL×3). The organic phase was washed with saturated sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, and filtered. The filtrate was concentrated under reduced pressure. The resulting residue was purified by silica gel column chromatography with developing solvent system C to give the title product 9b (48 mg, 19% yield).
MS m/z (ESI): 515.0 [M+1].
9b (20 mg, 0.038 mmol) was dissolved in 4.5 mL of a solvent mixture of tetrahydrofuran and ethyl acetate (V:V=2:1), and palladium on carbon (12 mg, 10% loading, dry basis) was added. The system was purged with hydrogen three times, and the reaction mixture was stirred at room temperature for 1 h. The reaction mixture was filtered through celite, and the filter cake was rinsed with ethyl acetate. The filtrate was concentrated to give the crude title product 9c (13 mg), which was directly used in the next step without purification.
MS m/z (ESI): 424.9 [M+1].
1b (10 mg, 18.8 μmol) was added to a reaction flask, and 1 mL of N,N-dimethylformamide was added. The system was purged with argon three times, and the mixture was cooled to 0-5° C. in an ice-water bath, followed by addition of a drop of triethylamine, crude 9c (13 mg, 30.6 μmol), and 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride (16.9 mg, 61.2 μmol). The reaction mixture was stirred in an ice bath for 40 min. 10 mL of water was added, followed by extraction with ethyl acetate (10 mL×3). The organic phases were combined, washed with saturated sodium chloride solution (10 mL×2), dried over anhydrous sodium sulfate, and filtered. The filtrate was concentrated under reduced pressure. The resulting residue was purified by thin layer chromatography with developing solvent system B to give the title product 9d (19 mg, 73.6% yield).
MS m/z (ESI): 842.1 [M+1].
9d (19 mg, 22.6 μmol) was dissolved in 2 mL of dichloromethane, and 1 mL of diethylamine was added. The reaction mixture was stirred at room temperature for 2 h and concentrated under reduced pressure. 1 mL of toluene was added, followed by concentration under reduced pressure; the procedures were repeated twice. The residue was slurried with 3 mL of n-hexane and let stand. Then, the supernatant was removed, and the solid was kept. The solid residue was concentrated under reduced pressure and dried using an oil pump to give the crude title product 9e (17 mg), which was directly used in the next step without purification.
MS m/z (ESI): 638.0 [M+18].
Crude 9e (13.9 mg, 22.4 μmol) was dissolved in 0.6 mL of N,N-dimethylformamide. The system was purged with argon three times, and the solution was cooled to 0-5° C. in an ice-water bath. A solution of 8g (21.2 mg, 44.8 μmol) in 0.3 mL of N,N-dimethylformamide was added, followed by addition of 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride (18.5 mg, 67.3 μmol). The reaction mixture was stirred in an ice bath for 10 min. Then, the ice bath was removed, and the reaction mixture was warmed to room temperature and stirred for 1 h to produce compound 9. The reaction mixture was purified by high performance liquid chromatography (separation conditions: chromatography column: XBridge Prep C18 OBD 5 μm 19×250 mm; mobile phase: A-water (10 mmol of NH4OAc), B-acetonitrile, gradient elution, flow rate: 18 mL/min). The corresponding fractions were collected and concentrated under reduced pressure to give the title products (9-A: 2.4 mg, 9-B: 1.7 mg).
MS m/z (ESI): 1074.4 [M+1].
Single-Configuration Compound 9-A (Shorter Retention Time):
UPLC analysis: retention time: 1.14 min; purity: 85% (chromatography column: ACQUITY UPLC BEHC18 1.7 μm 2.1×50 mm; mobile phase: A-water (5 mmol of NH4OAc), B-acetonitrile).
1H NMR (400 MHz, DMSO-d6): δ 8.60 (t, 1H), 8.51-8.49 (d, 1H), 8.32-8.24 (m, 1H), 8.13-8.02 (m, 2H), 8.02-7.96 (m, 1H), 7.82-7.75 (m, 1H), 7.31 (s, 1H), 7.26-7.15 (m, 4H), 6.99 (s, 1H), 6.55-6.48 (m, 1H), 5.65-5.54 (m, 1H), 5.41 (s, 2H), 5.35-5.15 (m, 3H), 4.74-4.62 (m, 1H), 4.54-4.40 (m, 2H), 3.76-3.64 (m, 4H), 3.62-3.48 (m, 2H), 3.20-3.07 (m, 2H), 3.04-2.94 (m, 1H), 2.80-2.62 (m, 1H), 2.45-2.30 (m, 3H), 2.25-2.15 (m, 2H), 2.15-2.04 (m, 2H), 1.93-1.78 (m, 2H), 1.52-1.39 (m, 3H), 1.34-1.12 (m, 5H), 0.87 (t, 3H), 0.64-0.38 (m, 4H).
Single-Configuration Compound 9-B (Longer Retention Time):
UPLC analysis: retention time: 1.16 min; purity: 89% (chromatography column: ACQUITY UPLC BEHC18 1.7 μm 2.1×50 mm; mobile phase: A-water (5 mmol of NH4OAc), B-acetonitrile).
1H NMR (400 MHz, DMSO-d6): δ 8.68-8.60 (m, 1H), 8.58-8.50 (m, 1H), 8.32-8.24 (m, 1H), 8.13-8.02 (m, 2H), 8.02-7.94 (m, 1H), 7.82-7.75 (m, 1H), 7.31 (s, 1H), 7.26-7.13 (m, 3H), 6.99 (s, 1H), 6.55-6.48 (m, 1H), 5.60-5.50 (m, 1H), 5.41 (s, 2H), 5.35-5.15 (m, 2H), 4.78-4.68 (m, 1H), 4.60-4.40 (m, 2H), 3.76-3.58 (m, 4H), 3.58-3.48 (m, 1H), 3.20-3.10 (m, 2H), 3.08-2.97 (m, 2H), 2.80-2.72 (m, 2H), 2.45-2.30 (m, 3H), 2.25-2.13 (m, 2H), 2.13-2.04 (m, 2H), 2.03-1.94 (m, 2H), 1.91-1.78 (m, 2H), 1.52-1.39 (m, 3H), 1.34-1.12 (m, 4H), 0.91-0.79 (m, 3H), 0.53-0.34 (m, 4H).
The DAR value n was calculated by UV-HPLC for some ADC examples of the present disclosure, specifically as follows:
1. Determination Method:
Cuvettes containing sodium succinate buffer were placed into the reference cell and sample cell, and the absorbance of the solvent blank was subtracted. Then, a cuvette containing test solution was placed into the sample cell, and the absorbances at 280 nm and 370 nm were determined.
2. Calculation for results: The loading capacity of the ADC stock solution was determined by ultraviolet spectrophotometry (instrument: Thermo nanodrop2000 ultraviolet spectrophotometer), based on the principle that the total absorbance of the ADC stock solution at a certain wavelength is the sum of the absorbances of the drug and the monoclonal antibody at that wavelength, namely:
A
280 nm=εmab-280bCmab+εDrug-280bCDrug (1)
εDrug-280: the mean molar attenuation coefficient of the drug at 280 nm is 5100;
CDrug: the concentration of the drug;
ϵmab-280: the mean molar attenuation coefficient of the monoclonal antibody stock solution at 280 nm is 214,600;
Cmab: the concentration of the monoclonal antibody stock solution;
b: the optical path length is 1 cm.
Similarly, an equation for the total absorbance of the sample at 370 nm can be given as:
A
370 nm=εmab-370bCmab+εDrug-370bCDrug (2)
εDrug-370: the mean molar attenuation coefficient of the drug at 370 nm was 19000;
CDrug: the concentration of the drug;
εmab-370: the attenuation coefficient of the monoclonal antibody stock solution at 370 nm is 0;
Cmab: the concentration of the monoclonal antibody stock solution;
b: the optical path length is 1 cm.
The drug loading can be calculated using both equations (1) and (2) as well as the attenuation coefficients of the monoclonal antibody and the drug at both wavelengths and their concentrations.
Drug loading=CDrug/Cmab.
The DAR value was calculated by RP-HPLC (reversed-phase high performance liquid chromatography) for some ADC examples of the present disclosure, specifically as follows:
A naked antibody (unconjugated antibody) and an ADC test sample (at concentration 1 mg/mL) were reduced with 4 μL of DDT (sigma) in a water bath at 37° C. for 1 h, and then transferred to an insert. Analysis was performed on a high performance liquid chromatograph Agilent 1200, with Agilent PLRP-S 1000A 8 μm 4.6×250 mm selected as the chromatography column, the column temperature at 80° C., the DAD detector at wavelength 280 nm, the flowrate at 1 mL/min, and the injection volume at 40 μL. Comparisons were made to the spectra of the sample and the naked antibody to identify the locations of the light chain and heavy chain, and then integration was performed on the spectrum of the test sample to calculate the DAR value n.
1) 0.25 M DTT Solution:
Example of preparation: 5.78 mg of DTT was weighed into 150 μL of purified water and completely dissolved to give 0.25 M DTT solution, which was then stored at −20° C.
2) Mobile Phase A (0.1% TFA in Water):
Example of preparation: 1000 mL of purified water was measured out using a graduated cylinder, and 1 mL of TFA (sigma) was added. The solution was well mixed before use and was stored at 2-8° C. for 14 days.
3) Mobile Phase B (0.1% TFA in Acetonitrile):
Example of preparation: 1000 mL of acetonitrile was measured out using a graduated cylinder, and 1 mL of TFA was added. The solution was well mixed before use and was stored at 2-8° C. for 14 days.
Comparisons were made to the spectra of the sample and the naked antibody to identify the locations of the light chain and heavy chain, and then integration was performed on the spectrum of the test sample to calculate the DAR value (n).
The calculation formula is as follows:
Total LC peak area=LC peak area+LC+1 peak area
Total HC peak area=HC peak area+HC+1 peak area+HC+2 peak area+HC+3 peak area
LC DAR=Σ(number of linked drugs×percent peak area)/total LC peak area
HC DAR=Σ(number of linked drugs×percent peak area)/total HC peak area
DAR=LC DAR+HC DAR.
To a PBS buffer containing antibody h1902-5 (0.05 M aqueous PBS buffer at pH 6.5; 10.0 mg/mL, 320.0 mL, 21.62 μmol) was added at 37° C. an aqueous solution of tris(2-carboxyethyl)phosphine (TCEP) (10 mM, 11.03 mL, 110.3 μmol). The reaction mixture was shaken on a water bath shaker at 37° C. for 3 h before the reaction was terminated. The reaction mixture was cooled to 25° C. in a water bath.
Compound 9-A (350 mg, 303 μmol) was dissolved in 13.2 mL of acetonitrile and 6.6 mL of DMSO, and the resulting solution was added to the above reaction mixture that was cooled to 25° C., which was then shaken on a water bath shaker at 25° C. for 3 h before the reaction was terminated.
The resulting reaction mixture was purified through an ultrafiltration membrane successively with 5 L of PBS buffer (50 mM, pH=6.5, 4% acetonitrile, 2% DMSO) and 5 L of succinic acid buffer (10 mM, pH=5.3) to remove small molecules. Sucrose was added at concentration 60 mg/mL and tween-20 at concentration 0.2 mg/mL to give final exemplary product ADC-1 of general formula antibody-drug conjugate h1902-5-9-A (10 mM succinic acid buffer at pH 5.3; 10 mg/mL, 2.626 g). Yield: 81.81 0.
Mean calculated by UV-HPLC: n=6.8.
Using the methods described above, exemplary product ADC-2 of general formula antibody-drug conjugate h1901-11-9-A can be prepared using compound 9-A, and antibody h1901-11 in place of h1902-5, with the DAR value n being 7.1.
To an aqueous PBS buffer of antibody h1901-11 (0.05 M aqueous PBS buffer at pH 6.5; 10.0 mg/mL, 1 mL, 67.5 nmol) was added at 37° C. a prepared aqueous solution of tris(2-carboxyethyl)phosphine (TCEP) (10 mM, 10.1 μL, 101 nmol). The reaction mixture was shaken on a water bath shaker at 37° C. for 3 h before the reaction was terminated. The reaction mixture was cooled to 25° C. in a water bath.
Compound 9-A (0.58 mg, 540 nmol) was dissolved in 34 μL of DMSO, and the resulting solution was added to the above reaction mixture, which was then shaken on a water bath shaker at 25° C. for 3 h before the reaction was terminated. The reaction mixture was desalted and purified through a Sephadex G25 gel column (elution phase: 0.05 M PBS buffer at pH 6.5, containing 0.001 M EDTA) to give exemplary product ADC-3 of antibody-drug conjugate h1901-11-9-A in PBS buffer (0.72 mg/mL, 11.2 mL), which was then stored at 4° C. Mean calculated by RP-HPLC: n=2.51.
To an aqueous PBS buffer of antibody h1901-11 (0.05 M aqueous PBS buffer at pH 6.5; 10.0 mg/mL, 1 mL, 67.5 nmol) was added at 37° C. a prepared aqueous solution of tris(2-carboxyethyl)phosphine (TCEP) (10 mM, 16.9 μL, 169 nmol). The reaction mixture was shaken on a water bath shaker at 37° C. for 3 h before the reaction was terminated. The reaction mixture was cooled to 25° C. in a water bath.
Compound 9-A (0.73 mg, 680 nmol) was dissolved in 43 μL of DMSO, and the resulting solution was added to the above reaction mixture, which was then shaken on a water bath shaker at 25° C. for 3 h before the reaction was terminated. The reaction mixture was desalted and purified through a Sephadex G25 gel column (elution phase: 0.05 M PBS buffer at pH 6.5, containing 0.001 M EDTA) to give exemplary product ADC-4 of antibody-drug conjugate h1901-11-9-A in PBS buffer (0.62 mg/mL, 12.5 mL), which was then stored at 4° C. Mean calculated by RP-HPLC: n=4.06.
To an aqueous PBS buffer of antibody h1901-11 (0.05 M aqueous PBS buffer at pH 6.5; 10.0 mg/mL, 1 mL, 67.5 nmol) was added at 37° C. a prepared aqueous solution of tris(2-carboxyethyl)phosphine (TCEP) (10 mM, 35.8 μL, 358 nmol). The reaction mixture was shaken on a water bath shaker at 37° C. for 3 h before the reaction was terminated. The reaction mixture was cooled to 25° C. in a water bath.
Compound 9-A (1.09 mg, 1015 nmol) was dissolved in 64 μL of DMSO, and the resulting solution was added to the above reaction mixture, which was then shaken on a water bath shaker at 25° C. for 3 h before the reaction was terminated. The reaction mixture was desalted and purified through a Sephadex G25 gel column (elution phase: 0.05 M PBS buffer at pH 6.5, containing 0.001 M EDTA) to give exemplary product ADC-5 of antibody-drug conjugate h1901-11-9-A in PBS buffer (0.54 mg/mL, 12.5 mL), which was then stored at 4° C. Mean calculated by RP-HPLC: n=6.8.
To an aqueous PBS buffer of antibody h1902-5 (0.05 M aqueous PBS buffer at pH 6.5; 10.0 mg/mL, 1.08 mL, 72.9 nmol) was added at 37° C. a prepared aqueous solution of tris(2-carboxyethyl)phosphine (TCEP) (10 mM, 10.9 μL, 109 nmol). The reaction mixture was shaken on a water bath shaker at 37° C. for 3 h before the reaction was terminated. The reaction mixture was cooled to 25° C. in a water bath.
Compound 9-A (0.63 mg, 587 nmol) was dissolved in 40 μL of DMSO, and the resulting solution was added to the above reaction mixture, which was then shaken on a water bath shaker at 25° C. for 3 h before the reaction was terminated. The reaction mixture was desalted and purified through a Sephadex G25 gel column (elution phase: 0.05 M PBS buffer at pH 6.5, containing 0.001 M EDTA) to give exemplary product ADC-6 of h1902-5-9-A in PBS buffer (0.7 mg/mL, 13.0 mL), which was then stored at 4° C. Mean calculated by RP-HPLC: n=2.69.
To an aqueous PBS buffer of antibody h1902-5 (0.05 M aqueous PBS buffer at pH 6.5; 10.0 mg/mL, 1.08 mL, 72.9 nmol) was added at 37° C. a prepared aqueous solution of tris(2-carboxyethyl)phosphine (TCEP) (10 mM, 18.3 μL, 183 nmol). The reaction mixture was shaken on a water bath shaker at 37° C. for 3 h before the reaction was terminated. The reaction mixture was cooled to 25° C. in a water bath.
Compound 9-A (0.79 mg, 736 nmol) was dissolved in 50 μL of DMSO, and the resulting solution was added to the above reaction mixture, which was then shaken on a water bath shaker at 25° C. for 3 h before the reaction was terminated. The reaction mixture was desalted and purified through a Sephadex G25 gel column (elution phase: 0.05 M PBS buffer at pH 6.5, containing 0.001 M EDTA) to give exemplary product ADC-7 of h1902-5-9-A in PBS buffer (0.6 mg/mL, 14.0 mL), which was then stored at 4° C. Mean calculated by RP-HPLC: n=4.25.
To an aqueous PBS buffer of antibody h1902-5 (0.05 M aqueous PBS buffer at pH 6.5; 10.0 mg/mL, 1.08 mL, 72.9 nmol) was added at 37° C. a prepared aqueous solution of tris(2-carboxyethyl)phosphine (TCEP) (10 mM, 38.7 μL, 387 nmol). The reaction mixture was shaken on a water bath shaker at 37° C. for 3 h before the reaction was terminated. The reaction mixture was cooled to 25° C. in a water bath.
Compound 9-A (1.18 mg, 1099 nmol) was dissolved in 70 μL of DMSO, and the resulting solution was added to the above reaction mixture, which was then shaken on a water bath shaker at 25° C. for 3 h before the reaction was terminated. The reaction mixture was desalted and purified through a Sephadex G25 gel column (elution phase: 0.05 M PBS buffer at pH 6.5, containing 0.001 M EDTA) to give exemplary product ADC-8 of h1902-5-9-A in PBS buffer (0.56 mg/mL, 14.2 mL), which was then stored at 4° C. Mean calculated by RP-HPLC: n=7.01.
To histidine-acetate-Tris/EDTA buffer (10 mM histidine-acetate-Tris buffer at pH 7.2, 2.5 mM EDTA buffer; 20.6 g/L, 6.49 L, 0.91 mmol) containing antibody h1902-5 was added at 12° C. a prepared TCEP histidine buffer (10 mM histidine buffer; 1.717 mM, 1.16 L, 1.99 mmol). The reaction mixture was stirred in a water bath at 12° C. for 2 h before the reaction was terminated to give a solution of intermediate I.
Compound 9-A (4.72 g, 4.39 mmol) was dissolved in 0.38 L of DMSO to give a solution of compound 9-A in DMSO. 0.38 L of DMSO was added to the above solution of intermediate I, and then the above solution of compound 9-A in DMSO was added. The reaction mixture was stirred in a water bath at 12° C. for 1 h before the reaction was terminated.
The reaction mixture was purified through a Capto S Impact cation chromatography column, which was washed with 9 column volumes of 0.05 M acetate buffer containing 10% (v/v) DMSO (pH=5.0) and with 6 column volumes of 0.05 M acetate buffer (pH=5.0), followed by elution with 0.05 M acetic acid and 0.30 M sodium chloride buffer (pH=5.5) to remove free toxins and the residual solvent from the reaction mixture. The cation eluate was subjected to 7-fold volume equal-volume ultrafiltration (polycellulose membrane of 30 KD was used as the ultrafiltration membrane) at 22° C. to give exemplary product ADC-9 of h1902-5-9-A. Mean calculated by RP-HPLC: n=4.1.
The drug loading obtained in this example is a non-limiting example, and one skilled in the art can obtain conjugates of different DAR values (1-10, preferably 1-8, and more preferably 2-8 and 2-7) by adjusting the reaction conditions and reagents.
A Cell-based ELISA assay was used for testing the binding properties of claudin18.2 antibodies. The stably transfected claudin18.2-expressing NUGC4 cells were cultured in a 96-well cell plate. When growing at 90% density, the cells were immobilized with 4% paraformaldehyde for 1 h. The plate was washed 3 times with PBST buffer (pH 7.4 PBS containing 0.05% Tween-20), and a PBS-diluted 5% skim milk (powdered skim milk from Brightdairy) blocking buffer was added at 200 μL/well. The plate was incubated in a 37° C. incubator for 2.5 h or was let stand at 4° C. overnight (16-18 h) for blocking. After blocking, the blocking buffer was removed. The plate was washed 3 times with the PBST buffer, and then a test antibody that was diluted with a sample diluent (pH 7.4 PBS containing 1% r milk) to different concentrations was added at 50 μL/well. The plate was incubated in a 37° C. incubator for 2 h. After incubation, the plate was washed 5 times with PBST, and an HRP-labeled goat anti-human secondary antibody (Jackson Immuno Research, 109-035-003) that was diluted with the sample diluent was added at 100 μL/well. The plate was incubated at 37° C. for 1 h. The plate was washed 6 times with PBST, and then TMB chromogenic substrate (KPL, 52-00-03) was added at 50 μL/well. The plate was incubated at room temperature for 10-15 min, and the reaction was terminated by adding 1 M H2SO4 at 50 μL/well. The absorbance at 450 nm was read using an MD Versa Max™ microplate reader, and the binding EC50 value of the claudin18.2 antibody to claudin18.2 was calculated.
The stably transfected claudin18.2-expressing NUGC4 cells were suspended in FACS buffer (2% fetal bovine serum (Gibco, 10099141) pH 7.4 PBS (Sigma, P4417-100TAB)) to give a 1×106/mL cell suspension, which was then added to a 96-well round-bottom plate (Corning, 3795) at 100 μL/well. After centrifugation and removal of the supernatant, the test claudin18.2 antibody that was diluted with FACS buffer to different concentrations was added at 50 μL/well. The plate was incubated in the dark in a 4° C. refrigerator for 1 h. The plate was washed 3 times with FACS buffer by centrifugation at 300 g, and Alexa Fluor 488 goat anti-human IgG (H+L) (invitrogen, A-11013) at working concentration was added. The plate was incubated in the dark in a 4° C. refrigerator for 40 min. The plate was washed 3 times with FACS buffer by centrifugation at 300 g and tested on a BD FACS CantoII flow cytometer for geometric mean fluorescence intensity. The binding EC50 value of the claudin18.2 antibody to the stably transfected claudin18.2-expressing NUGC4 cells was calculated. The results are shown in
A test claudin18.2 antibody pre-labeled with DyLight 488 NHS Ester (thermofisher, 46403) was added to 1×106/mL stably transfected claudin18.2-expressing NUGC4 cells at a final concentration of 5 μg/mL. The mixture was incubated in the dark on ice for 1 h and washed 3 times with pre-cooled FACS buffer (pH 7.4 PBS, 2% fetal bovine serum) by centrifugation. After removal of the supernatant, the remainder was added to a pre-heated complete medium, followed by incubation in a 37° C. cell incubator with 5% CO2. The cells were taken out after 0, 0.5, 1, 2 and 4 h and stored in the dark on ice. After all samples were collected, they are centrifuged at 300 g at low temperature and the supernatants were removed. An elution buffer (pH 1.7 0.05 M glycine, 0.1 M sodium chloride) was added, and then the mixtures were incubated at room temperature for 7 min, washed once with FACS buffer by centrifugation at 300 g, and tested on a BD FACS CantoII flow cytometer for geometric mean fluorescence intensity. The efficiency of endocytosis of the claudin18.2 antibody by the stably transfected claudin18.2-expressing NUGC4 cells was calculated. The results (see
On the day of experiment, HEK293/hClaudin18.2 cells were collected into a U-bottomed 96-well plate at 1-2×105 cells per well. A human claudin18.2 antibody that was 2× diluted serially (12 concentration points) from an initial concentration of 5 μg/mL was added, and the plate was incubated at 4° C. for 1 h. IMAB362 was used as a positive control, and a negative control with no antibody was also set. The antibody was removed by centrifugation, and FITC anti-human IgG Fc antibody (200×) was added at 100 μL/well. The plate was incubated in the dark at 4° C. for 30 min and washed twice with PBS+2% FBS before flow cytometry analysis. BD FACS CantoII was started and preheated, and then the BD FACSDiva software was run to start a new experiment. The HEK293/hClaudin18.2 negative control sample was tested, and the FSC and SSC voltages were adjusted to appropriate values and saved. Blank sample B and standard curve 1 were tested according to the instructions for Quantum™ FITC-5 MESF Kit, and the FITC voltage was adjusted to an appropriate value and saved. The samples in the U-bottomed 96-well plate were tested at the saved voltage, and data were recorded. The experimental data were analyzed using Flowjo software to obtain a Geo mean, and an MESF-Geo Mean standard curve was fit according to the instructions for Quantum™ FITC-5 MESF Kit. The molar concentration of the human claudin18.2 antibody bound to HEK293/hClaudin18.2 cells and the free antibody concentration were calculated according to the concentration fluorescence value of the FITC anti-human IgG Fc antibody, and the Bmax and the dissociation constant KD of the antibody were calculated through Scatchard plots. The results are shown in Table 13.
A variety of NUGC4 cells (with high, moderate and low expression of claudin18.2) were digested, centrifuged at 1000 rpm, resuspended, and counted. The cells were resuspended at a density of 3×105 cells/mL in phenol red-free RPMI 1640 (Gibco, 11835-030) supplemented with 10% FBS (New Zealand ultra-low IgG fetal bovine serum, Gibco, 1921005PJ). 25 μL of cells were added to each well in a 96-well plate (Corning, 3903) (7500 cells/well). An antibody was diluted into the phenol red-free medium to give a 3× antibody dilution, which was then added to the cell plate at 25 μL/well. The plate was incubated in a 37° C. incubator with 5% CO2 for 0.5 h.
Effector cells (FcrR3A-V158-NFAT-RE-Jurkat cells) were harvested, centrifuged at 1000 rpm, resuspended, and counted. The cells were resuspended at a density of 3×106 cells/mL in phenol red-free RPMI 1640 supplemented with 10% FBS (New Zealand ultra-low IgG fetal bovine serum), and 25 μL of the cells were added to each well of the plate (7.5×104 cells/well). The plate was incubated in a 37° C. incubator with 5% CO2 for 6 h.
75 μL of Bright-Glo (Promega, E2610) was added to each well of the plate, and the chemical luminescence was detected using a microplate reader (PerkinElmer, VITOR3).
The results (see Table 14 and
This experiment was intended to test the inhibitory activity of the pharmaceutical compounds of the present disclosure against the in vitro proliferation of U87MG cells (glioma cells, Cell Bank, Chinese Academy of Sciences, Catalog #TCHu138) and SK-BR-3 tumor cells (human breast cancer cells, ATCC, Catalog #HTB-30). The cells were treated in vitro with a compound at different concentrations. After 6 days of culture, the proliferation of cells was tested using CTG (CellTiter-Glo® Luminescent Cell Viability Assay, Promega, Catalog #G7573) reagents, and the in vitro activity of the compound was evaluated according to the IC50 value.
The method of testing the inhibition of the in vitro proliferation of U87MG cells was described below as an example for the method of assaying for the inhibitory activity of the compounds of the present disclosure against the in vitro proliferation of tumor cells. The method is also applicable to, but not limited to, tests for inhibitory activity against the in vitro proliferation of other tumor cells.
1. Cell culture: U87MG and SK-BR-3 cells were cultured in EMEM medium (GE, Catalog #SH30024.01) containing 10% FBS and McCoy's 5A medium (Gibco, Catalog #16600-108) containing 10% FBS, respectively.
2. Preparation of cells. U87MG and SK-BR-3 cells growing at log phase were washed once with PBS (phosphate buffer, Shanghai BasalMedia Technologies Co., Ltd.) and then digested with 2-3 mL of trypsin (0.25% Trypsin-EDTA (1×), Gibico, Life Technologies) for 2-3 min. After the cells were completely digested, 10-15 mL of cell culture media were added to elute the digested cells. The mixtures were centrifuged at 1000 rpm for 5 min, and the supernatants were discarded. Then the cells were resuspended in 10-20 mL of cell culture media to give single-cell suspensions.
3. Cell plating. The U87MG and SK-BR-3 single-cell suspensions were each well mixed and adjusted with cell culture media to cell densities of 2.75×103 cells/mL and 8.25×103 cells/mL, respectively. The adjusted cell suspensions were each well mixed and added to 96-well cell culture plates at 180 μL/well. To each of the peripheral wells of the 96-well plates was added 200 μL of media only. The plate was incubated in an incubator for 24 h (37° C., 5% CO2).
4. Preparation of compounds. A compound was dissolved in DMSO (dimethyl sulfoxide, Shanghai Titan Scientific Co., Ltd.) to prepare a stock solution at an initial concentration of 10 mM.
Small molecule compounds were prepared at an initial concentration of 500 nM as follows.
Different test samples at concentration 100 μM (30 μL) were added to the first column of a 96-well U-bottom plate, and 20 μL of DMSO was added to each well of the second column through the eleventh column. The samples in the first column (10 μL) were added to the 20 μL of DMSO in the second column, and the mixtures were well mixed. The mixtures (10 μL) were added to the third column, and so on to the tenth column. The drugs in the plate (5 μL per well) were transferred to EMEM media (95 μL), and the mixtures were well mixed for later use.
ADCs were prepared at an initial concentration of 10 nM or 500 nM as follows.
Different test samples at concentration 100 nM or 5 μM (100 μL) were added to the first column of a 96-well plate, and 100 μL of PBS was added to each well of the second column through the eleventh column. The samples in the first column (50 μL) were added to the 100 μL of PBS in the second column, and the mixtures were well mixed. The mixtures (50 μL) were added to the third column, and so on, by 3-fold dilution, to the tenth column.
5. Sample addition. The test samples prepared at different concentrations (20 μL) were added to a culture plate, with two duplicate wells set for each sample. The plate was incubated in an incubator for 6 days (37° C., 5% CO2).
6. Color development. The 96-well cell culture plate was taken out, and 90 μL of CTG solution was added to each well, followed by 10 min of incubation at room temperature.
7. Plate reading. The 96-well cell culture plate was taken out and tested in a microplate reader (BMG labtech, PHERAstar FS) for chemiluminescence.
Data were processed and analyzed using Microsoft Excel and Graphpad Prism 5. The example results are shown in the table below.
Conclusion: The small molecular fragments of the present disclosure have significant inhibitory activity against the proliferation of SK-BR-3 cells and U87 cells, and the chiral centers have certain influence on the inhibitory activity of the compounds.
CellTiter-Glo luminescence cell viability assays were used to test ADC molecules for the in vitro killing effects on the human gastric cancer cell strain in this experiment. On day 1, NUGC4 cells with low, moderate and high claudin18.2 expression were harvested, adjusted to density 2.5×104/mL, and added to a 96-well white transparent plate at 90 μL/well, with about 2500 cells per well. The cells were cultured overnight in a 37° C. incubator with 5% CO2. On day 2, samples were 4× diluted serially from an initial concentration of 5 μM in a U-bottom 96-well plate to obtain 9 concentration points, and the diluted samples were added to the cell plate at 10 μL/well. The cells were cultured at 37° C. in 5% CO2 for 6 days. On day 8, the cell culture plate was taken out, and Cell Titer-Glo Reagent were added at 50 μL/well. The plate was let stand at room temperature for 2-3 min and read on a PHERAstar FS plate reader for fluorescence values. Data analysis was performed using the GraphPad Prism software. See Table 16.
Balb/c nude mice were inoculated subcutaneously in the right flank with human gastric cancer cells, NUGC4 cells (with moderate claudin18.2 expression) (5×106 cells in 50% matrigel/mouse) and divided at day 0 into a total of 5 groups of 8. The mean tumor volume was about 84.41 mm3.
Each mouse was intraperitoneally injected with an ADC at 0.1 mL/10 g body weight at days 0, 4 and 11, making a total of 3 injections.
Each mouse was intraperitoneally injected with an ADC at 0.1 mL/10 g body weight from the day of grouping at intervals of 5 days, for a total of 4 injections. The tumor volumes and body weights were measured twice a week and the results were recorded.
Excel 2003 statistical software was used. The mean values were calculated as avg; the SD values were calculated as STDEV; the SEM values were calculated as STDEV/SQRT; and the inter-group difference P-value was calculated as TTEST.
Tumor volume (V) was calculated as: V=½×Llong×Lshort2
Relative volume (RTV)=VT/V0
Tumor inhibition rate (%)=(CRTV−TRTV)/CRTV (%)
where V0 and VT are the tumor volumes at the beginning of the experiment (the day of first administration is defined as day 0) and at the time of measurement, respectively; CRTV and TRTV are the relative tumor volumes of the blank control group and the experimental groups, respectively, at the end of the experiment. The results are shown in Table 17 and
| Number | Date | Country | Kind |
|---|---|---|---|
| 201911273041.7 | Dec 2019 | CN | national |
| 202011060513.3 | Sep 2020 | CN | national |
| Filing Document | Filing Date | Country | Kind |
|---|---|---|---|
| PCT/CN2020/135680 | 12/11/2020 | WO |
