ANTI-PD-L1 ANTIBODY, ANTI-PD-1 ANTIBODY, AND THE USE OF INHIBITOR TARGETING PD-1/PD-L1 AND COX-2 INHIBITOR

Abstract
The present disclosure provides an anti-PD-L1 antibody capable of repeated administration even to animals other than rat. The present disclosure further provides a novel therapeutic strategy using an inhibitor targeting PD-1/PD-L1. A pharmaceutical composition which comprises a COX-2 inhibitor and is administered before, after or simultaneously with the administration of an inhibitor targeting PD-1/PD-L1. A potentiator for the immunostimulatory effect of an inhibitor targeting PD-1/PD-L1, which comprises a COX-2 inhibitor. The present disclosure also provides an anti-PD-1 antibody capable of repeated administration even to animals other than rat. An anti-PD-1 antibody comprising (a) a light chain comprising a light chain variable region containing CDR1 having the amino acid sequence of QSLEYSDGYTY (SEQ ID NO: 164), CDR2 having the amino acid sequence of GVS and CDR3 having the amino acid sequence of FQATHDPDT (SEQ ID NO: 165) and the light chain constant region of an antibody of an animal other than rat; and (b) a heavy chain comprising a heavy chain variable region containing CDR1 having the amino acid sequence of GFSLTSYY (SEQ ID NO: 166), CDR2 having the amino acid sequence of IRSGGST (SEQ ID NO: 167) and CDR3 having the amino acid sequence of ARTSSGYEGGFDY (SEQ ID NO: 168) and the heavy chain constant region of an antibody of an animal other than rat. A pharmaceutical composition comprising the above-described anti-PD-1 antibody as an active ingredient. A method for preparing the anti-PD-1 antibody is also provided.
Description
TECHNICAL FIELD

The present disclosure relates to an anti-PD-L1 antibody and an anti-PD-1 antibody. More specifically, one aspect of the present disclosure relates to an anti-PD-L1 antibody comprising a variable region containing complementarity-determining regions (CDR) of a rat anti-bovine PD-L1 antibody and a constant region of an antibody of an animal other than rat. The present disclosure also relates to an anti-PD-1 antibody. Moreover, one aspect of the present disclosure relates to an anti-PD-1 antibody comprising a variable region containing complementarity-determining regions (CDRs) of a rat anti-bovine PD-1 antibody and a constant region of an antibody of an animal other than rat. The present disclosure further relates to combined use of an inhibitor targeting PD-1/PD-L1 and a COX-2 inhibitor.


BACKGROUND ART

Programmed cell death 1 (PD-1), an immunoinhibitory receptor, and its ligand programmed cell death ligand 1 (PD-L1) are molecules identified by Prof Tasuku Honjo et al., Kyoto University, as factors which inhibit excessive immune response and are deeply involved in immunotolerance (Non-Patent Document No. 1: Ishida Y, Agata Y, Shibahara K, Honjo T The EMBO Journal. 1992 November; 11(11):3887-3895). Recently, it has been elucidated that these molecules are also involved in immunosuppression in tumors. In the field of human medical care, an antibody drug that inhibits the effect of PD-1 has been developed and put into practical use (Opdivo™, Ono Pharmaceutical Co., Ltd.).


To date, the present inventors have been developing an immunotherapy for animal refractory diseases targeting PD-1 or PD-L1, and have revealed that this novel immunotherapy is applicable to multiple-diseases and multiple-animals. (Non-Patent Document No. 2: Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology. 2014 August; 142(4):551-61; Non-Patent Document No. 3: Maekawa N, Konnai S, Ikebuchi R, Okagawa T, Adachi M, Takagi S, Kagawa Y, Nakajima C, Suzuki Y, Murata S, Ohashi K. PLoS One. 2014 Jun. 10; 9(6):e98415; Non-Patent Document No. 4: Mingala C N, Konnai S, Ikebuchi R, Ohashi K. Comp. Immunol. Microbiol. Infect. Dis. 2011 January; 34(1):55-63.). Further, the interaction between PD-1 and PD-L1 is one of the major molecular mechanisms through which tumors and infections evade immune responses. It has been reported that inhibition of the above interaction by using an antibody which specifically binds to either of those molecules can produce antitumor effects and anti-pathogenic effects.


However, the antibodies which the present inventors have prepared to date are rat antibodies, and therefore it is impossible to administer those antibodies repeatedly to animals other than rat.


DISCLOSURE OF THE INVENTION
Problem for Solution by the Invention

It is one object of the present disclosure to provide an anti-PD-L1 antibody capable of repeated administration even to animals other than rat. It is also an object of the present disclosure to provide an anti-PD-1 antibody capable of repeated administration even to animals other than rat. It is another object of the present disclosure to provide a novel therapeutic strategy using inhibitors targeting PD-1/PD-L1.


Means to Solve the Problem

It has been determined that the variable regions of a rat anti-bovine PD-L1 monoclonal antibody (4G12) capable of inhibiting the binding of canine PD-1 to PD-L1, and then combined genes encoding the resultant variable regions with genes encoding the constant regions of a canine immunoglobulin (IgG-D equivalent to human IgG4) to thereby obtain a chimeric antibody gene, which was introduced into Chinese hamster ovary cells (CHO cells). By culturing/proliferating the resultant CHO cells, the present inventors have succeeded in preparing a rat-canine chimeric anti-PD-L1 antibody. Further, it has been determined that the CDRs of the variable region of the rat anti-bovine PD-L1 monoclonal antibody 4G12.


Furthermore, it has been determined the variable regions of the rat anti-bovine PD-L1 monoclonal antibody 4G12 capable of inhibiting the binding of bovine PD-1 to PD-L1, and then combined genes encoding the resultant variable regions with genes encoding the constant regions of a bovine immunoglobulin (bovine IgG1, with mutations having been introduced into the putative binding sites of Fcγ receptors in CH2 domain in order to inhibit ADCC activity; see FIG. 19 for amino acid numbers and mutations: 250 E->P, 251 L->V, 252 P->A, 253 G->deletion, 347 A->S, 348 P->S; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561) to thereby obtain a chimeric antibody gene. This gene was introduced into Chinese hamster ovary cells (CHO cells). By culturing/proliferating the resultant cells, a rat-bovine chimeric anti-PD-L1 antibody have been prepared successfully. The present disclosure has been achieved based on these findings.


Furthermore, toward establishment of a novel control method for canine tumors and bovine infections, it has been confirmed in in vitro tests an immunostimulatory effect induced by COX-2 inhibitors and enhancement of that effect when such inhibitors are used in combination with anti-PD-L1 antibody. The present disclosure provides what has been achieved based on these findings.


Furthermore, it has been determined the variable regions of a rat anti-bovine PD-1 monoclonal antibody (5D2) capable of inhibiting the binding of bovine PD-1 to PD-L1, and then combined genes encoding the resultant variable regions with genes encoding the constant regions of a bovine immunoglobulin (bovine IgG1, with mutations having been introduced into the putative binding sites of Fcγ receptors in CH2 domain in order to inhibit ADCC activity; see FIGS. 12 and 22 for amino acid numbers and mutations: 251 E->P, 252 L->V, 253 P->A, 254 G->deletion, 348 A->S, 349 P->S; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561) to thereby obtain a chimeric antibody gene. This gene was introduced into Chinese hamster ovary cells (CHO cells). By culturing/proliferating the resultant cells, the present inventors have succeeded in preparing a rat-bovine chimeric anti-bovine PD-1 antibody. Further, the present inventors have determined the CDRs of the variable regions of rat anti-bovine PD-1 monoclonal antibody (5D2). The present disclosure has been achieved based on these findings.


A summary of the present disclosure according to some embodiments is as described below.

    • (1) A pharmaceutical composition which comprises a COX-2 inhibitor and is administered before, after or simultaneously with the administration of an inhibitor targeting PD-1/PD-L1.
    • (2) The pharmaceutical composition of (1) above, wherein the inhibitor targeting PD-1/PD-L1 is an antibody.
    • (3) The pharmaceutical composition of (1) or (2) above, wherein the antibody is at least one antibody selected from the group consisting of anti-PD-1 antibody and anti-PD-L1 antibody.
    • (4) The pharmaceutical composition of any one of (1) to (3) above, wherein the COX-2 inhibitor is at least one compound selected from the group consisting of meloxicam, piroxicam, celecoxib, firocoxib, robenacoxib, carprofen and etodolac.
    • (5) The pharmaceutical composition of any one of (1) to (4) above for use in prevention and/or treatment of cancer and/or infection.
    • (6) The pharmaceutical composition of any one of (1) to (5) above, wherein the inhibitor targeting PD-1/PD-L1 and the COX-2 inhibitor are administered separately.
    • (7) The pharmaceutical composition of any one of (1) to (5) above, which is a combination drug comprising the inhibitor targeting PD-1/PD-L1 and the COX-2 inhibitor.
    • (8) A potentiator for the immunostimulatory effect of an inhibitor targeting PD-1/PD-L1, which comprises a COX-2 inhibitor.
    • (9) A method of preventing and/or treating cancer and/or infection, comprising administering to a human or animal subject a pharmaceutically effective amount of a COX-2 inhibitor before, after or simultaneously with the administration of an inhibitor targeting PD-1/PD-L1.
    • (10) Use of a COX-2 inhibitor for preventing and/or treating cancer and/or infection, wherein the COX-2 inhibitor is administered before, after or simultaneously with the administration of an inhibitor targeting PD-1/PD-L1.
    • (11) Use of a COX-2 inhibitor for use in a method of preventing and/or treating cancer and/or infection, wherein the COX-2 inhibitor is administered before, after or simultaneously with the administration of an inhibitor targeting PD-1/PD-L1.
    • (12) An anti-PD-1 antibody comprising (a) a light chain comprising a light chain variable region containing CDR1 having the amino acid sequence of QSLEYSDGYTY (SEQ ID NO: 164), CDR2 having the amino acid sequence of GVS and CDR3 having the amino acid sequence of FQATHDPDT (SEQ ID NO: 165) and the light chain constant region of an antibody of an animal other than rat; and (b) a heavy chain comprising a heavy chain variable region containing CDR1 having the amino acid sequence of GFSLTSYY (SEQ ID NO: 166), CDR2 having the amino acid sequence of IRSGGST (SEQ ID NO: 167) and CDR3 having the amino acid sequence of ARTSSGYEGGFDY (SEQ ID NO: 168) and the heavy chain constant region of an antibody of an animal other than rat.
    • (13) The antibody of (12) above, wherein the light chain variable region and the heavy chain variable region are derived from rat.
    • (14) The antibody of (13) above, wherein the light chain variable region is the light chain variable region of a rat anti-bovine PD-1 antibody and the heavy chain variable region is the heavy chain variable region of a rat anti-bovine PD-1 antibody.
    • (15) The antibody of (14) above, wherein the light chain variable region has the amino acid sequence as shown in SEQ ID NO. 149 and the heavy chain variable region has the amino acid sequence as shown in SEQ ID NO: 150.
    • (16) The antibody of any one of (12) to (15) above, wherein the light chain constant region of an antibody of an animal other than rat has the amino acid sequence of the constant region of lambda chain or kappa chain.
    • (17) The antibody of any one of (12) to (16) above, wherein the heavy chain constant region of an antibody of an animal other than rat has the amino acid sequence of the constant region of an immunoglobulin equivalent to human IgG4, or has mutations introduced thereinto that reduce ADCC activity and/or CDC activity.
    • (18) The antibody of (17) above, wherein the animal other than rat is bovine; the light chain constant region of the bovine antibody has the amino acid sequence of the constant region of lambda chain; and the heavy chain constant region of the bovine antibody has mutations introduced thereinto that reduce ADCC activity and/or CDC activity.
    • (19) The antibody of (18) above, wherein the light chain constant region of the bovine antibody has the amino acid sequence as shown in SEQ ID NO: 151 and the heavy chain constant region of the bovine antibody has the amino acid sequence as shown in SEQ ID NO: 152.
    • (20) The antibody of any one of (12) to (19) above which has a four-chain structure comprising two light chains and two heavy chains.
    • (21) A pharmaceutical composition comprising the antibody of any one of (13) to (20) above as an active ingredient.
    • (22) The composition of (21) above for prevention and/or treatment of cancers and/or inflammations.
    • (23) The composition of (22) above, wherein the cancers and/or inflammations are selected from the group consisting of neoplastic diseases, leukemia, Johne's disease, anaplasmosis, bacterial mastitis, mycotic mastitis, mycoplasma infections (such as mycoplasma mastitis, mycoplasma pneumonia or the like), tuberculosis, Theileria orientalis infection, cryptosporidiosis, coccidiosis, trypanosomiasis and leishmaniasis.
    • (24) An artificial genetic DNA comprising (a′) a DNA encoding a light chain comprising a light chain variable region containing CDR1 having the amino acid sequence of QSLEYSDGYTY (SEQ ID NO: 164), CDR2 having the amino acid sequence of GVS and CDR3 having the amino acid sequence of FQATHDPDT (SEQ ID NO: 165) and the light chain constant region of an antibody of an animal other than rat and (b′) a DNA encoding a heavy chain comprising a heavy chain variable region containing CDR1 having the amino acid sequence of GFSLTSYY (SEQ ID NO: 166), CDR2 having the amino acid sequence of IRSGGST (SEQ ID NO: 167) and CDR3 having the amino acid sequence of ARTSSGYEGGFDY (SEQ ID NO: 168) and the heavy chain constant region of an antibody of an animal other than rat.
    • (25) A vector comprising the artificial genetic DNA of (24) above.
    • (26) A host cell transformed with the vector of (25) above.
    • (27) A method of preparing an antibody, comprising culturing the host cell of (26) above and collecting an anti-PD-1 antibody from the resultant culture.
    • (28) A DNA encoding a light chain comprising a light chain variable region containing CDR1 having the amino acid sequence of QSLEYSDGYTY (SEQ ID NO: 164), CDR2 having the amino acid sequence of GVS and CDR3 having the amino acid sequence of FQATHDPDT (SEQ ID NO: 165) and the light chain constant region of an antibody of an animal other than rat.
    • (29) A DNA encoding a heavy chain comprising a heavy chain variable region containing CDR1 having the amino acid sequence of GFSLTSYY (SEQ ID NO: 166), CDR2 having the amino acid sequence of IRSGGST (SEQ ID NO: 167) and CDR3 having the amino acid sequence of ARTSSGYEGGFDY (SEQ ID NO: 168) and the heavy chain constant region of an antibody of an animal other than rat.


Effect of the Invention

Immunostimulatory effect is enhanced by combined use of an inhibitor targeting PD-1/PD-L1 and a COX-2 inhibitor. Moreover, a novel anti-PD-1 antibody has been obtained. This antibody is applicable even to those animals other than rat.


The present specification encompasses the contents disclosed in the specifications and/or drawings of Japanese Patent Application Nos. 2017-140891, No. 2018-016074 2016-159090, and No. 2017-099615, based on which the present patent application claims priority. The present specification further incorporates by reference U.S. Patent Application Publication Nos. 2019/0185568, 2022/0227871 and 2020/0131270 in their entirety.





BRIEF DESCRIPTION OF THE DRAWINGS


FIG. 1 PGE2 production from canine tumor cell lines CMeC, LMeC, CMM-1, CMM-2 (these four are derived from melanoma) and HM-POS (derived from osteosarcoma). PGE2 production tended to be high in CMM-1 and HM-POS.



FIG. 2 COX2 expression levels in canine tumor cell lines CMeC, LMeC, CMM-1, CMM-2 (these four are derived from melanoma) and HM-POS (derived from osteosarcoma). Consistent with PGE2 production, COX2 expression levels were high in CMM-1 and HM-POS.



FIG. 3 Effect of PGE2 on canine peripheral blood mononuclear cells (PBMCs). Canine PBMCs were cultured under stimulation for 3 days in the presence of a superantigen SEB and anti-CD28 antibody. Then, IL-2 and IFN-γ concentrations in the resultant culture supernatant were determined by ELISA. PGE2 inhibited production of IL-2 and IFN-γ from canine PBMCs.



FIG. 4 PGE2 production inhibitory effect of COX-2 inhibitor upon canine tumor cell lines. Meloxicam showed a tendency to decrease PGE2 production from canine tumor cell lines CMM-1 (derived from melanoma) and HM-POS (derived from osteosarcoma).



FIG. 5 PGE2 production inhibitory effect of COX-2 inhibitor upon canine PBMCs. Meloxicam decreased the amount of PGE2 produced from canine PBMCs cultured for 3 days in the presence of a superantigen SEB and anti-CD28 antibody for stimulation.



FIG. 6 Canine immune cell activating effect of COX-2 inhibitor. Canine PBMCs were cultured for 3 days in the presence of a superantigen SEB and anti-CD28 antibody to stimulate canine lymphocytes. Then, IL-2 concentration in the resultant culture supernatant was determined by ELISA. Meloxicam increased the IL-2 production from canine PBMCs.



FIG. 7 Canine immune cell activating effect by combined use of anti-PD-L1 antibody and COX-2 inhibitor. Canine PBMCs were cultured for 3 days in the presence of a superantigen SEB and anti-CD28 antibody to stimulate canine lymphocytes. Then, IL-2 concentration in the resultant culture supernatant was determined by ELISA. Although anti-PD-L1 antibody taken alone increased the IL-2 production from canine PBMCs, the IL-2 production was further increased when meloxicam was used in combination with the antibody.



FIG. 8 Inhibition of the binding of recombinant canine PD-L1 to recombinant canine PD-1. The binding of canine PD-L1-Ig to canine PD-1-Ig was detected on ELISA plates. The optical density (O.D.) without addition of antibody was taken as 100%. O.D. at each antibody concentration was shown as relative value. Among rat anti-bovine PD-L1 monoclonal antibodies 4G12 (Rat IgG2a (κ)), 5A2 (Rat IgG1 (κ)) and 6G7 (Rat IgM (κ)) which showed cross-reaction with canine PD-L1, clones 4G12 and 6G7 exhibited a high binding inhibition capacity.



FIG. 9 Schematic drawings of pDC6 vector and a rat-canine chimeric anti-PD-L1 antibody.



FIG. 10 Expression and purification of rat-canine chimeric anti-PD-L1 antibodies c4G12 and c6G7. SDS-PAGE was performed under non-reducing conditions, followed by visualization of bands by CBB staining. a: purification with protein A alone. b: a +gel filtration chromatography.



FIG. 11 PD-1/PD-L1 binding inhibition activities of rat-canine chimeric anti-PD-L1 antibodies c4G12 and c6G7.



FIG. 12 Establishment of cell clones capable of high expression of rat-canine chimeric anti-PD-L1 antibody c4G12.



FIG. 13 SDS-PAGE images of rat-canine chimeric anti-PD-L1 antibody c4G12. Rat anti-bovine PD-L1 antibody 4G12 and rat-canine chimeric anti-PD-L1 antibody c4G12 were electrophoresed under reducing conditions and non-reducing conditions, followed by visualization of bands by CBB staining. Under reducing conditions, a band of antibody's heavy chain was detected at around 50 kDa and a band of antibody's light chain at around 25 kDa. No bands other than the bands of interest were detected.



FIG. 14 Inhibitory activities of rat anti-bovine PD-L1 antibody 4G12 and rat-canine chimeric anti-PD-L1 antibody c4G12 against canine PD-1/PD-L1 binding and CD80/PD-L1 binding. Rat anti-bovine PD-L1 monoclonal antibody 4G12 and rat-canine chimeric anti-PD-L1 antibody c4G12 reduced the amounts of binding of PD-L1-Ig to canine PD-1-Ig and CD80-Ig. No change due to chimerization of the antibody was observed in binding inhibition activity



FIG. 15 Canine immune cell activation effect by rat-canine chimeric anti-PD-L1 antibody c4G12. Canine PBMCs were cultured under stimulation for 3 days, followed by determination of IL-2 and IFN-γ concentrations in the supernatant by ELISA. Further, nucleic acid analogue EdU was added to the culture medium at day 2 of the culture under stimulation, followed by determination of the EdU uptake by flow cytometry. Rat-canine chimeric anti-PD-L1 antibody c4G12 increased the production of IL-2 and IFN-γ from canine PBMCs and enhanced proliferation of CD4+ and CD8+ lymphocytes.



FIG. 16 Expression of PD-L1 in oral melanoma (A) and undifferentiated sarcoma (B)



FIG. 17 CT images and appearances of tumor in a test of treatment by administering rat-canine chimeric anti-PD-L1 antibody c4G12 to a dog with oral melanoma. (a,d) Before the start of the treatment, (b,e) at week 10 of the treatment, and (c,f) at week 34 of the treatment. A remarkable antitumor effect was recognized upon five administrations of the antibody (at week 10 from the start of the treatment). At week 34, a further reduction of tumor was confirmed.



FIG. 18 Time-dependent changes in the longest diameter of the tumor in the dog with oral melanoma shown in FIG. 17. Reduction by 30% or more compared to the baseline longest diameter was regarded as partial response (PR).



FIG. 19 CT images in a test of treatment by administering rat-canine chimeric anti-PD-L1 antibody c4G12 to a dog with undifferentiated sarcoma. (a,c) Before the start of the treatment, (b,d) at week 3 of the treatment. A remarkable reduction of tumor was recognized upon two administrations of the antibody.



FIG. 20 CT images in a test of treatment by administering rat-canine chimeric anti-PD-L1 antibody c4G12 to dogs with oral melanoma (pulmonary metastatic cases). (a,d,g) Before the start of the treatment, (b,e,h) at week 6 of the treatment, and (c,f,i) at week 18 of the treatment. A plurality of pulmonary metastatic lesions disappeared upon nine administrations of the antibody.



FIG. 21 Time-dependent changes in the proportion survival of dogs with oral melanoma after the occurrence of pulmonary metastasis. In the antibody administration group, the survival duration may have been prolonged compared to the control group.



FIG. 22 CDR1, CDR2 and CDR3 regions in the light chain variable region and the heavy chain variable region of rat anti-bovine PD-L1 antibody 4G12 are illustrated.



FIG. 23 Effect of PGE2 on bovine T cell responses.



FIG. 24 Effect of PGE2 on expression of immune-related genes in bovine PBMCs.



FIG. 25 Effect of PGE2 on expression of PD-L1 in bovine PBMCs.



FIG. 26 Immunostimulatory effect of COX-2 inhibitor in bovine PBMCs.



FIG. 27 Kinetic analyses of PGE2 in cattle infected with M. avium subsp. paratuberculosis.



FIG. 28 Changes in PD-L1 expression level by antigen stimulation in cattle infected with M. avium subsp. paratuberculosis.



FIG. 29 Analyses of expression of PGE2, EP2 and PD-L1 in M. avium subsp. paratuberculosis-infected lesions.



FIG. 30 Activation of M. avium subsp. paratuberculosis-specific immune responses by COX-2 inhibitor.



FIG. 31 Immunostimulatory effect of rat anti-bovine PD-L1 antibody in cattle infected with M. avium subsp. paratuberculosis.



FIG. 32 Combined effect of COX-2 inhibitor and rat anti-bovine PD-L1 antibody on activation of M. avium subsp. paratuberculosis-specific immune responses.



FIG. 33 Combined effect of COX-2 inhibitor and rat-bovine chimeric anti-bovine PD-L1 antibody on activation of M. avium subsp. paratuberculosis-specific immune responses.



FIG. 34 Kinetic analyses of PGE2 in BLV-infected cattle.



FIG. 35 Expression analyses of COX-2 and EP4 in BLV-infected cattle.



FIG. 36 Changes in PGE2 production by antigen stimulation in BLV-infected cattle.



FIG. 37 Effect of PGE2 on BLV provirus in PBMCs derived from BLV-infected cattle.



FIG. 38 Changes in PD-L1 expression by antigen stimulation in BLV-infected cattle.



FIG. 39 Activation of BLV-specific immune responses by COX-2 inhibitor.



FIG. 40 Antiviral effect of COX-2 inhibitor in BLV-infected cattle.



FIG. 41 Combined effect of COX-2 inhibitor and rat anti-bovine PD-L1 antibody on activation of BLV-specific immune responses.



FIG. 42 Combined effect of COX-2 inhibitor and rat-bovine chimeric anti-bovine PD-L1 antibody on activation of BLV-specific immune responses.



FIG. 43 Antiviral effect from combined use of COX-2 inhibitor and rat-bovine chimeric anti-bovine PD-L1 antibody in BLV-infected cattle.



FIG. 44 Kinetic analyses of PGE2 in Mycoplasma bovis-infected cattle.



FIG. 45 Correlation between plasma PGE2 and indicators of immunosuppression in Mycoplasma bovis-infected cattle.



FIG. 46 Expression analyses of COX-2 and EP4 in Mycoplasma bovis-infected cattle.



FIG. 47 Combined immunostimulatory effect of COX-2 inhibitor and rat anti-bovine PD-L1 antibody in Mycoplasma bovis-infected cattle.



FIG. 48 The amino acid sequence of rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12. CDR1, CDR2 and CDR3 regions in the light chain variable region and the heavy chain variable region of rat anti-bovine PD-L1 antibody 4G12 are shown. Further, amino acids introduced as mutations to bovine IgG1 (CH2 domain) are also shown (amino acid numbers and mutations: 250 E->P, 251 L->V, 252 P->A, 253 G->deletion, 347 A->S, 348 P->S).



FIG. 49 Schematic drawings of pDC6 vector and rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12.



FIG. 50 Confirmation of the purity of purified rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12.



FIG. 51 Binding specificity of rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12.



FIG. 52 Inhibitory activity of rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 against bovine PD-1/PD-L1 binding (the test results of inhibition against binding of bovine PD-L1 expressing cells and soluble bovine PD-1).



FIG. 53 Inhibitory activity of rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 against bovine PD-1/PD-L1 binding (the test results of inhibition against binding of bovine PD-1 expressing cells and soluble bovine PD-L1).



FIG. 54 Responsivity of rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 to BLV antigen (in terms of cell proliferation).



FIG. 55 Responsivity of rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 to BLV antigen (in terms of IFN-γ production).



FIG. 56 The proliferation response of T cells against BLV antigen in a calf experimentally infected with BLV through administration of rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12.



FIG. 57 Changes in BLV provirus loads in the calf experimentally infected with BLV through administration of rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12.



FIG. 58 The amino acid sequence of rat-bovine chimeric anti-bovine PD-1 antibody ch5D2. CDR1, CDR2 and CDR3 in the light chain and the heavy chain variable regions of rat anti-bovine PD-1 antibody 5D2 are shown. Further, amino acids introduced as mutations to bovine IgG1 (CH2 domain) are also shown (amino acid numbers and mutations: 251 E->P, 252 L->V, 253 P->A, 254 G->deletion, 348 A->S, 349 P->S).



FIG. 59 Schematic drawings of pDN112 vector and rat-bovine chimeric anti-bovine PD-1 antibody ch5D2.



FIG. 60 The amount of production and the purity after purification of rat-bovine chimeric anti-bovine PD-1 antibody ch5D2.



FIG. 61 Binding property of rat-bovine chimeric anti-bovine PD-1 antibody ch5D2.



FIG. 62 Inhibitory activity of rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 against bovine PD-1/PD-L1 binding.



FIG. 63 Transition in blood concentrations of rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 after administration to the cattle experimentally infected with BLV.



FIG. 64 Proliferative response of T cells against BLV antigen in the cattle experimentally infected with BLV through administration of rat-bovine chimeric anti-bovine PD-1 antibody ch5D2.



FIG. 65 Changes in the BLV provirus load in the cattle experimentally infected with BLV through administration of rat-bovine chimeric anti-bovine PD-1 antibody ch5D2.



FIG. 66 Cross-reactivity of rat anti-bovine PD-1 antibody 5D2 with ovine PD-1



FIG. 67 Cross-reactivity of rat anti-bovine PD-1 antibody 5D2 with water buffalo T cells



FIG. 68]3D structure of bovine IgG1 constant region and putative binding site for Fcγ receptors



FIG. 69 pDC6 vector



FIG. 70 Purities after purification of rat-bovine chimeric anti-bovine PD-1 antibodies ch5D2 IgG1 WT and IgG1 ADCC—.



FIG. 71 Binding of rat-bovine chimeric anti-bovine PD-1 antibodies ch5D2 IgG1 WT and IgG1 ADCC—to individual bovine Fcγ receptors.



FIG. 72 Sequences disclosed in the present disclosure.





BEST MODES FOR CARRYING OUT THE INVENTION

Hereinbelow, the present disclosure will be described in detail.


One aspect of the present disclosure provides an anti-PD-L1 antibody comprising a light chain constant region of an antibody of an animal other than rat; and a heavy chain constant region of an antibody of an animal other than rat. The present disclosure provides a pharmaceutical composition which comprises a COX-2 inhibitor and is administered before, after or simultaneously with the administration of an inhibitor targeting PD-1/PD-L1.


Cyclooxygenase 2 (COX-2) is an enzyme involved in a process of biosynthesizing prostanoids including prostaglandin E2 (PGE2). In contrast to COX-1 that is expressed constitutively, expression of COX-2 is induced by stimulation from cytokines, growth factors, etc. in inflammatory tissues. High expression of COX-2 has been reported in various tumors and infections, and it is believed that COX-2 is involved in the growth and pathogenesis of tumor cells and infected cells. Since PGE2 inhibits, in particular, the effector function of cytotoxic T-cells via receptors EP2 and EP4, PGE2 has recently been attracting attention as a humoral factor constituting an immunosuppressive tumor microenvironment. On the other hand, COX-2 inhibitors are expected to decrease PGE2 production to thereby reduce the suppression upon immune cells. In mouse models, enhancement of antitumor effect and antiviral effect by combined use of a COX-2 inhibitor (such as celecoxib) and an inhibitor targeting PD-1/PD-L1 has been recognized.


COX-2 inhibitor may be an agent that selectively inhibits COX-2. Specific examples of COX-2 inhibitor include, but are not limited to, meloxicam, piroxicam, celecoxib, firocoxib, robenacoxib, carprofen and etodolac.


PD-1 (Programmed cell death-1) is a membrane protein expressed in activated T cells and B cells. Its ligand PD-L1 is expressed in various cells such as antigen-presenting cells (monocytes, dendritic cells, etc.) and cancer cells. PD-1 and PD-L1 work as inhibitory factors which inhibit T cell activation. Certain types of cancer cells and virus-infected cells escape from host immune surveillance by expressing the ligand of PD-1 to thereby inhibit T cell activation.


As inhibitors targeting PD-1/PD-L1, substances which specifically bind to PD-1 or PD-L1 may be given. Such substances include, but are not limited to, proteins, polypeptides, oligopeptides, nucleic acids (including natural-type and artificial nucleic acids), low molecular weight organic compounds, inorganic compounds, cell extracts, and extracts from animals, plants, soils or the like. These substances may be either natural or synthetic products.


Preferable inhibitors targeting PD-1/PD-L1 are antibodies. More preferably, antibodies such as anti-PD-1 antibody and anti-PD-L1 antibody may be given. Any type of antibody may be used as long as it has an inhibitory activity targeting PD-1/PD-L1. The antibody may be any of polyclonal antibody, monoclonal antibody, chimeric antibody, single chain antibody, humanized antibody or human-type antibody. Methods for preparing such antibodies are known. The antibody may be derived from any organisms such as human, mouse, rat, rabbit, goat, guinea pig, dog or cattle. As used herein, the term “antibody” is a concept encompassing antibodies of smaller molecular sizes such as Fab, F(ab)′2, ScFv, Diabody, VH, VL, Sc(Fv)2, Bispecific sc(Fv)2, Minibody, scFv-Fc monomer or scFv-Fc dimer.


As an example of anti-PD-L1 antibody, one comprising (a) a light chain comprising a light chain variable region containing CDR1 having the amino acid sequence of QSLLYSENQKDY (SEQ ID NO: 37), CDR2 having the amino acid sequence of WAT and CDR3 having the amino acid sequence of GQYLVYPFT (SEQ ID NO: 38) and a light chain constant region of an antibody of an animal other than rat; and (b) a heavy chain comprising a heavy chain variable region containing CDR1 having the amino acid sequence of GYTFTSNF (SEQ ID NO: 39), CDR2 having the amino acid sequence of IYPEYGNT (SEQ ID NO: 40) and CDR3 having the amino acid sequence of ASEEAVISLVY (SEQ ID NO: 41) and a heavy chain constant region of an antibody of an animal other than rat may be given.


CDR1, CDR2 and CDR3 in the light chain variable region (VL) of rat anti-bovine PD-L1 antibody 4G12 are a region comprising the amino acid sequence of QSLLYSENQKDY (SEQ ID NO: 37), a region comprising the amino acid sequence of WAT and a region comprising the amino acid sequence of GQYLVYPFT (SEQ ID NO: 38), respectively (see FIG. 22).


Further, CDR1, CDR2 and CDR3 in the heavy chain variable region (VH) of rat anti-bovine PD-L1 antibody 4G12 are a region comprising the amino acid sequence of GYTFTSNF (SEQ ID NO: 39), a region comprising the amino acid sequence of IYPEYGNT (SEQ ID NO: 40) and a region comprising the amino acid sequence of ASEEAVISLVY (SEQ ID NO: 41), respectively (see FIG. 22).


In the amino acid sequences of QSLLYSENQKDY (SEQ ID NO: 37), WAT and GQYLVYPFT (SEQ ID NO: 38), as well as the amino acid sequences of GYTFTSNF (SEQ ID NO: 39), IYPEYGNT (SEQ ID NO: 40) and ASEEAVISLVY (SEQ ID NO: 41), one, two, three, four or five amino acids may be deleted, substituted or added.


One aspect of the present disclosure provides an anti-PD-1 antibody comprising (a) a light chain comprising a light chain variable region containing CDR1 having the amino acid sequence of QSLEYSDGYTY (SEQ ID NO: 164), CDR2 having the amino acid sequence of GVS and CDR3 having the amino acid sequence of FQATHDPDT (SEQ ID NO: 165) and the light chain constant region of an antibody of an animal other than rat; and (b) a heavy chain comprising a heavy chain variable region containing CDR1 having the amino acid sequence of GFSLTSYY (SEQ ID NO: 166), CDR2 having the amino acid sequence of IRSGGST (SEQ ID NO: 167) and CDR3 having the amino acid sequence of ARTSSGYEGGFDY (SEQ ID NO: 20) and the heavy chain constant region of an antibody of an animal other than rat.


CDR1, CDR2 and CDR3 in the light chain variable region (VL) of rat anti-bovine PD-1 antibody 5D2 (to be described later) are respectively a region consisting of the amino acid sequence of QSLEYSDGYTY (SEQ ID NO: 164), a region consisting of the amino acid sequence of GVS and a region consisting of the amino acid sequence of FQATHDPDT (SEQ ID NO: 165) (see FIG. 58).


Further, CDR1, CDR2 and CDR3 in the heavy chain variable region (VH) of rat anti-bovine PD-1 antibody 5D2 are respectively a region consisting of the amino acid sequence of GFSLTSYY (SEQ ID NO: 166), a region consisting of the amino acid sequence of IRSGGST (SEQ ID NO: 167) and a region consisting of the amino acid sequence of ARTSSGYEGGFDY (SEQ ID NO: 168) (see FIG. 58).


In the amino acid sequences of QSLEYSDGYTY (SEQ ID NO: 164), GVS and FQATHDPDT (SEQ ID NO: 165), as well as the amino acid sequences of GFSLTSYY (SEQ ID NO: 166), IRSGGST (SEQ ID NO: 167) and ARTSSGYEGGFDY (SEQ ID NO: 168), one, two, three, four or five amino acids may be deleted, substituted or added. Even when such mutations are introduced, the resulting amino acid sequences may be capable of having the function of a CDR in the light chain or heavy chain variable region of the PD-1 antibody.


In the above-described anti-PD-L1 antibody, VL and VH thereof may be derived from rat. For example, VL thereof may be the VL of a rat anti-bovine PD-L1 antibody, and VH thereof may be the VH of the rat anti-bovine PD-L1 antibody.


The amino acid sequence of the VL and the amino acid sequence of the VH of the rat anti-bovine PD-L1 antibody are shown in SEQ ID NOS: 1 and 2, respectively. The amino acid sequences as shown in SEQ ID NOS: 1 and 2 may have deletion(s), substitution(s) or addition(s) of one or several (e.g., up to five, about 10 at the most) amino acids. Even when such mutations have been introduced, the resulting amino acid sequences are capable of having the function as VL or VH of the PD-L1 antibody.


The CL and CH of an antibody of an animal other than rat may be derived from an animal which produces a PD-L1 that cross-reacts with rat anti-bovine PD-L1 antibody 4G12.


There are two types of immunoglobulin light chain, which are called Kappa chain (κ) and Lambda chain (λ). In the above-described anti-PD-L1 antibody, the light chain constant region (CL) of an antibody of an animal other than rat may have the amino acid sequence of the constant region of either Kappa chain or Lambda chain. However, the relative abundance of Lambda chain is higher in ovine, feline, canine, equine and bovine, and that of Kappa chain is higher in mouse, rat, human and porcine. Since a chain with a higher relative abundance is considered to be preferable, an ovine, feline, canine, equine or bovine antibody preferably has the amino acid sequence of the constant region of Lambda chain whereas a mouse, rat, human or porcine antibody preferably has the amino acid sequence of the constant region of Kappa chain.


The heavy chain constant region (CH) of an antibody of an animal other than rat may have the amino acid sequence of the constant region of an immunoglobulin equivalent to human IgG4. Immunoglobulin heavy chain is classified into γ chain, μ chain, α chain, δ chain and E chain depending on the difference in constant region. According to the type of heavy chain present, five classes (isotypes) of immunoglobulin are formed; they are IgG, IgM, IgA, IgD and IgE.


Immunoglobulin G (IgG) accounts for 70-75% of human immunoglobulins and is the most abundantly found monomeric antibody in plasma. IgG has a four-chain structure consisting of two light chains and two heavy chains. Human IgG1, IgG2 and IgG4 have molecular weights of about 146,000, whereas human IgG3 has a long hinge region that connects Fab region and Fc region and has a larger molecular weight of 170,000. Human IgG1 accounts for about 65%, human IgG2 about 25%, human IgG3 about 7%, and human IgG4 about 3% of human IgG. They are uniformly distributed inside and outside of blood vessels. Having a strong affinity for Fc receptors and complement factors on effector cell surfaces, human IgG1 induces antibody-dependent cell cytotoxicity (ADCC) and also activates complements to induce complement-dependent cell cytotoxicity (CDC). Human IgG2 and IgG4 are low at ADCC and CDC activities because their affinity for Fc receptors and complement factors is low.


Immunoglobulin M (IgM), which accounts for about 10% of human immunoglobulins, is a pentameric antibody consisting of five basic four-chain structures joined together. It has a molecular weight of 970,000. Usually occurring only in blood, IgM is produced against infectious microorganisms and takes charge of early stage immunity.


Immunoglobulin A (IgA) accounts for 10-15% of human immunoglobulins. It has a molecular weight of 160,000. Secreted IgA is a dimeric antibody consisting of two IgA molecules joined together. IgA1 is found in serum, nasal discharge, saliva and breast milk. In intestinal juice, IgA2 is found abundantly.


Immunoglobulin D (IgD) is a monomeric antibody accounting for no more than 1% of human immunoglobulins. IgD is found on B cell surfaces and involved in induction of antibody production.


Immunoglobulin E (IgE) is a monomeric antibody that occurs in an extremely small amount, accounting for only 0.001% or less of human immunoglobulins. Immunoglobulin E is considered to be involved in immune response to parasites but in advanced countries where parasites are rare, IgE is largely involved in bronchial asthma and allergy among other things.


With respect to canine, sequences of IgG-A (equivalent to human IgG2), IgG-B (equivalent to human IgG1), IgG-C (equivalent to human IgG3) and IgG-D (equivalent to human IgG4) have been identified as the heavy chain of IgG. In the above-described anti-PD-L1 antibody, an IgG's heavy chain constant region with neither ADCC activity nor CDC activity is preferable (IgG4 in human). In the case where the constant region of an immunoglobulin equivalent to human IgG4 has not been identified, one may use a constant region that has lost both ADCC activity and CDC activity as a result of introducing mutations into the relevant region of an immunoglobulin equivalent to human IgG1.


In bovine, the constant region of an immunoglobulin equivalent to human IgG4 has not been identified, so mutations may be added at the relevant region of an immunoglobulin equivalent to human IgG1 and the resultant constant region then used. As one example, the amino acid sequence of the CH of a bovine antibody (IgG1 chain, GenBank: X62916) having mutations introduced into CH2 domain and a nucleotide sequence for such amino acid sequence (after codon optimization) are shown in SEQ ID NOS: 102 and 103, respectively.


When an animal other than rat is canine or bovine, an anti-PD-L1 antibody is more preferable in which (i) the CL of a canine or bovine antibody has the amino acid sequence of the constant region of Lambda chain and (ii) the CH of the canine or bovine antibody has the amino acid sequence of the constant region of an immunoglobulin equivalent to human IgG4.


The above-described anti-PD-L1 antibody encompasses rat-canine chimeric antibodies, caninized antibodies, rat-bovine chimeric antibodies and bovinized antibodies. However, animals are not limited to canine and bovine and may be exemplified by human, porcine, simian, mouse, feline, equine, goat, sheep, water buffalo, rabbit, hamster, guinea pig, bovine and the like.


For example, the anti-PD-L1 antibody described above may be an anti-PD-L1 antibody in which the CL of a canine antibody has the amino acid sequence as shown in SEQ ID NO: 3 and the CH of the canine antibody has the amino acid sequence as shown in SEQ ID NO: 4; or an anti-PD-L1 antibody in which the CL of a bovine antibody has the amino acid sequence as shown in SEQ ID NO: 100 and the CH of the bovine antibody has the amino acid sequence as shown in SEQ ID NO: 102.


The amino acid sequences as shown in SEQ ID NOS: 3 and 4 as well as SEQ ID NOS: 100 and 102 may have deletion(s), substitution(s) or addition(s) of one or several (e.g., up to five, about 10 at the most) amino acids. Even when such mutations have been introduced, the resulting amino acid sequences are capable of having the function as CL or CH of the PD-L1 antibody.


The above-described anti-PD-L1 antibody may have a four-chain structure comprising two light chains and two heavy chains.


The above-described anti-PD-L1 antibody may be prepared as described below. Briefly, an artificial gene is synthesized which comprises (i) the identified variable region sequences of a rat anti-bovine PD-L1 antibody and (ii) the constant region sequences of an antibody of an animal other than rat (e.g., canine or bovine) (preferably, human IgG4 antibody or antibody equivalent to human IgG4 antibody). The resultant gene is inserted into a vector (e.g., plasmid), which is then introduced into a host cell (e.g., mammal cell such as CHO cell). The host cell is cultured, and the antibody of interest is collected from the resultant culture.


The amino acid sequence and the nucleotide sequence of the VL of the rat anti-bovine PD-L1 antibody identified by the present inventors are shown in SEQ ID NOS: 1 and 5, respectively. Further, nucleotide sequences after codon optimization are shown in SEQ ID NOS: 15 and 112.


The amino acid sequence and the nucleotide sequence of the VH of the rat anti-bovine PD-L1 antibody identified by the present inventors are shown in SEQ ID NOS: 2 and 6, respectively. Further, nucleotide sequences after codon optimization are shown in SEQ ID NOS: 16 and 113.


The amino acid sequence and the nucleotide sequence of the CL (Lambda chain, GenBank: E02824.1) of a canine antibody are shown in SEQ ID NOS: 3 and 7, respectively. Further, the nucleotide sequence after codon optimization is shown in SEQ ID NO: 17.


The amino acid sequence and the nucleotide sequence of the CH (IgG-D chain, GenBank: AF354267.1) of the canine antibody are shown in SEQ ID NOS: 4 and 8, respectively. Further, the nucleotide sequence after codon optimization is shown in SEQ ID NO: 18.


Further, SEQ ID NO: 9 shows the amino acid sequence of a chimeric light chain comprising the VL of the rat anti-bovine PD-L1 antibody and the CL (Lambda chain, GenBank: E02824.1) of the canine antibody. The nucleotide sequence (after codon optimization) of the chimeric light chain comprising the VL of the rat anti-bovine PD-L1 antibody and the CL (Lambda chain, GenBank: E02824.1) of the canine antibody is shown in SEQ ID NO: 19.


SEQ ID NO: 10 shows the amino acid sequence of a chimeric heavy chain comprising the VH of the rat anti-bovine PD-L1 antibody and the CH (IgG-D chain, GenBank: AF354267.1) of the canine antibody. The nucleotide sequence (after codon optimization) of the chimeric heavy chain comprising the VH of the rat anti-bovine PD-L1 antibody and the CH (IgG-D chain, GenBank: AF354267.1) of the canine antibody is shown in SEQ ID NO: 20.


The amino acid sequence and the nucleotide sequence of the CL (Lambda chain, GenBank: X62917) of a bovine antibody are shown in SEQ ID NOS: 100 and 101, respectively. Further, the nucleotide sequence after codon optimization is shown in SEQ ID NO: 114.


The amino acid sequence and the nucleotide sequence (after codon optimization) of the CH (IgG1 chain, modified from GenBank: X62916) of the bovine antibody are shown in SEQ ID NOS: 102 and 103, respectively.


Further, SEQ ID NO: 115 shows the amino acid sequence of a chimeric light chain comprising the VL of the rat anti-bovine PD-L1 antibody and the CL (Lambda chain, GenBank: X62917) of the bovine antibody. The nucleotide sequence (after codon optimization) of the chimeric light chain comprising the VL of the rat anti-bovine PD-L1 antibody and the CL (Lambda chain, GenBank: X62917) of the bovine antibody is shown in SEQ ID NO: 117.


SEQ ID NO: 116 shows the amino acid sequence of a chimeric heavy chain comprising the VH of the rat anti-bovine PD-L1 antibody and the CH (IgG1 chain, modified from GenBank: X62916) of the bovine antibody. The nucleotide sequence (after codon optimization) of the chimeric heavy chain comprising the VH of the rat anti-bovine PD-L1 antibody and the CH (IgG1 chain, modified from GenBank: X62916) of the bovine antibody is shown in SEQ ID NO: 118.


Amino acid sequences and nucleotide sequences of CLs and CHs for various animals other than rat, canine and bovine may be obtained from known databases for use in the present disclosure.


Amino acid sequences and nucleotide sequences of CLs and CHs for canine, ovine, porcine, water buffalo, human and bovine are summarized in the table below.















TABLE









GenBank








Accession
IMGT



Species
Ig Domain
Nucleotide Sequence
Amino Acid Sequence
No.
Database
Reference






















Canine
Canine
IgG-D
GCCTCCACCACGGCCCCCTCG
ASTTAPSVFPLAPSCGSTS
AF354267
http://ww 
Tang L, et al.,


(Scienti-
Ig

GTTTTCCCACTGGCCCCCAGC
GSTVALACLVSGYFPEPVT

w.imgt.or
Vet. Immunol.


fic
heavy

TGCGGGTCCACTTCCGGCTCC
VSWNSGSLTSGVHTFPSV

g/IMGTre
Immunopathol,


Name:
chain

ACGGTGGCCCTGGCCTGCCTG
LQSSGLYSLSSTVTVPSSR

pertoire/i
80 (3-4), 259-270



Canis

constant

GTGTCAGGCTACTTCCCCGAG
WPSETFTCNVVHPASNTK

ndex.php
(2001), PMID:



lupus

region

CCTGTAACTGTGTCCTGGAAT
VDKPVPKESTCKCISPCPV

?section =
11457479



familiaris)

(CH1-

TCCGGCTCCTTGACCAGCGGT
PESLGGPSVFIFPPKPKDIL

LocusGe




CH3)

GTGCACACCTTCCCGTCCGTC
RITRTPEITCVVLDLGRED

nes&repe






CTGCAGTCCTCAGGGCTCTAC
PEVQISWFVDGKEVHTAK

rtoire = ge






TCCCTCAGCAGCACGGTGAC
TQPREQQFNSTYRVVSVL

netable & s






AGTGCCCTCCAGCAGGTGGC
PIEHQDWLTGKEFKCRVN

pecies = do






CCAGCGAGACCTTCACCTGCA
HIGLPSPIERTISKARGQAH

g & group =






ACGTGGTCCACCCGGCCAGC
QPSVYVLPPSPKELSSSDT

IGHC






AACACTAAAGTAGACAAGCC
VTLTCLIKDFFPPEIDVEW








AGTGCCCAAAGAGTCCACCT
QSNGQPEPESKYHTTAPQ








GCAAGTGTATATCCCCATGCC
LDEDGSYFLYSKLSVDKS








CAGTCCCTGAATCACTGGGAG
RWQQGDTFTCAVMHEAL








GGCCTTCGGTCTTCATCTTTCC
QNHYTDLSLSHSPGK*








CCCGAAACCCAAGGACATCCT
(SEQ ID NO: 4)








CAGGATTACCCGAACACCCGA









GATCACCTGTGTGGTGTTAGA









TCTGGGCCGTGAGGACCCTG









AGGTGCAGATCAGCTGGTTCG









TGGATGGTAAGGAGGTGCAC









ACAGCCAAGACGCAGCCTCG









TGAGCAGCAGTTCAACAGCA









CCTACCGTGTGGTCAGCGTCC









TCCCCATTGAGCACCAGGACT









GGCTCACCGGAAAGGAGTTC









AAGTGCAGAGTCAACCACAT









AGGCCTCCCGTCCCCCATCGA









GAGGACTATCTCCAAAGCCAG









AGGGCAAGCCCATCAGCCCA









GTGTGTATGTCCTGCCACCAT









CCCCAAAGGAGTTGTCATCCA









GTGACACGGTCACCCTGACCT









GCCTGATCAAAGACTTCTTCC









CACCTGAGATTGATGTGGAGT









GGCAGAGCAATGGACAGCCG









GAGCCCGAGAGCAAGTACCA









CACGACTGCGCCCCAGCTGG









ACGAGGACGGGTCCTACTTCC









TGTACAGCAAGCTCTCTGTGG









ACAAGAGCCGCTGGCAGCAG









GGAGACACCTTCACATGTGCG









GTGATGCATGAAGCTCTACAG









AACCACTACACAGATCTATCC









CTCTCCCATTCTCCGGGTAAA









TGA (SEQ ID NO: 8)










Canine 
Ig
CAGCCCAAGGCCTCCCCCT
QPKASPSVTLFPPSSEE
E02824
Not
None



Ig
lambda
CGGTCACACTCTTCCCGCC
LGANKATLVCLISDFYP

registered




light
(CL)
CTCCTCTGAGGAGCTCGGC
SGVTVAWKASGSPVTQ






chain

GCCAACAAGGCCACCCTGG
GVETTKPSKQSNNKYA






constant

TGTGCCTCATCAGCGACTTC
ASSYLSLTPDKWKSHSS






region

TACCCCAGCGGCGTGACGG
FSCLVTHEGSTVEKKVA








TGGCCTGGAAGGCAAGCGG
PAECS* (SEQ ID NO: 3)








CAGCCCCGTCACCCAGGGC









GTGGAGACCACCAAGCCCT









CCAAGCAGAGCAACAACAA









GTACGCGGCCAGCAGCTAC









CTGAGCCTGACGCCTGACA









AGTGGAAATCTCACAGCAG









CTTCAGCTGCCTGGTCACG









CACGAGGGGAGCACCGTGG









AGAAGAAGGTGGCCCCCGC









AGAGTGCTCTTAG (SEQ ID









NO: 7)









Ovine
Ovine
‘IgG1
GCCTCAACAACACCCCCGAA
ASTTPPKVYPLTSCCGDTS
X69797
http://ww
Dufour V. et al.,


(Scienti-
heavy

AGTCTACCCTCTGACTTCTTG
SSIVTLGCLVSSYMPEPVT

w.imgt.or
J. Immunol., 156.


tic
chain

CTGCGGGGACACGTCCAGCT
VTWNSGALTSGVHTFPAI

g/IMGTre
2163-2170


Name:
constant

CCATCGTGACCCTGGGCTGCC
LQSSGLYSLSSVVTVPAST

pertoir/li
(1996). PMID:



Ovis

region

TGGTCTCCAGCTATATGCCCG
SGAQTFICNVAHPASSTKV

ndex.php
8690905


aries)
(CH1~

AGCCGGTGACCGTGACCTGG
DKRVEPGCPDPCKHCRCP

?section = 




CH3)

AACTCTGGTGCCCTGACCAGC
PPELPGGPSVFIFPPKPKDT

LocusGe






GGCGTGCACACCTTCCCGGCC
LTISGTPEVTCVVVDVGQ

nes & repe






ATCCTGCAGTCCTCCGGGCTC
DDPEVQFSWFVDNVEVRT

rtoire = ge






TACTCTCTCAGCAGCGTGGTG
ARTKPREEQFNSTFRVVSA

netable & s






ACCGTGCCGGCCAGCACCTC
LPIQHQDWTGGKEFKCKV

pecies = sh






AGGAGCCCAGACCTTCATCTG
HNEALPAPIVRTISRTKGQ

eep & grou






CAACGTAGCCCACCCGGCCA
AREPQVYVLAPPQEELSK

p = IGHC






GCAGCACCAAGGTGGACAAG
STLSVTCLVTGFYPDYIAV








CGTGTTGAGCCCGGATGCCCG
EWQKNGQPESEDKYGTT








GACCCATGCAAACATTGCCGA
TSQLDADGSYFLYSRLRV








TGCCCACCCCCTGAGCTCCCC
DKNSWQEGDTYACVVMH








GGAGGACCGTCTGTCTTCATC
EALHNHYTQKSISKPPGK*








TTCCCACCGAAACCCAAGGA
(SEQ ID NO: 42)








CACCCTTACAATCTCTGGAAC









GCCCGAGGTCACGTGTGTGGT









GGTGGACGTGGGCCAGGATG









ACCCCGAGGTGCAGTTCTCCT









GGTTCGTGGACAACGTGGAG









GTGCGCACGGCCAGGACAAA









GCCGAGAGAGGAGCAGTTCA









ACAGCACCTTCCGCGTGGTCA









GCGCCCTGCCCATCCAGCACC









AAGACTGGACTGGAGGAAAG









GAGTTCAAGTGCAAGGTCCA









CAACGAAGCCCTCCCGGCCC









CCATCGTGAGGACCATCTCCA









GGACCAAAGGGCAGGCCCGG









GAGCCGCAGGTGTACGTCCTG









GCCCCACCCCAGGAAGAGCT









CAGCAAAAGCACGCTCAGCG









TCACCTGCCTGGTCACCGGCT









TCTACCCAGACTACATCGCCG









TGGAGTGGCAGAAAAATGGG









CAGCCTGAGTCGGAGGACAA









GTACGGCACGACCACATCCCA









GCTGGACGCCGACGGCTCCTA









CTTCCTGTACAGCAGGCTCAG









GGTGGACAAGAACAGCTGGC









AAGAAGGAGACACCTACGCG









TGTGTGGTGATGCACGAGGCT









CTGCACAACCACTACACACA









GAAGTCGATCTCTAAGCCTCC









GGGTAAATGA (SEQ ID NO: 43)











IgG2
GCCTCCACCACAGCCCCGAA
ASTTAPKVYPLTSCCGDTS
X70983

Clarkson C.A. et





AGTCTACCCTCTGACTTCTTG
SSSSIVTLGCLVSSYMPEP


al., Mol.





CTGCGGGGACCACGTCCAGCT
VTVTWNSGALTSGVHTFP


Immunol., 30,





CCAGCTCCATCGTGACCCTGG
AILQSSGLYSLSSVVTVPA


1195-1204





GCTGCCTGGTCTCCAGCTATAT
STSGAQTFICNVAHPASSA


(1993). PMID:





GCCCGAGCCGGTGACCGTGA
KVDKRVGISSDYSKCSKP


8413324





CCTGGAACTCTGGTGCCCTGA
PCVSRPSVFIFPPKPKDSL








CCAGCGGCGTGCACACCTTCC
MITGTPEVTCVVVDVGQG








CGGCCATCCTGCAGTCCTCCG
DPEVQFSWFVDNVEVRTA








GGCTCTACTCTCTCAGCAGCG
RTKPREEQFNSTFRVVSAL








TGGTGACCGTGCCGGCCAGC
PIQHDHWTGGKEFKCKV








ACCTCAGGAGCCCAGACCTTC
HSKGLPAPIVRTISRAKGQ








ATCTGCAACGTAGCCCACCCG
AREPQVYVLAPPQEELSK








GCCAGCAGCGCCAAGGTGGA
STLSVTCLVTGFYPDYIAV








CAAGCGTGTTGGGATCTCCAG
EWQRARQPESEDKYGTTT








TGACTACTCCAAGTGTTCTAA
SQLDADGSYFLYSRLRVD








ACCGCCTTGCGTGAGCCGACC
KSSWQRGDTYACVVMHE








GTCTGTCTTCATCTTCCCCCCG
ALHNHYTQKSISKPPGK*








AAACCCAAGGACAGCCTCAT
(SEQ ID NO: 44)








GATCACAGGAACGCCCGAGG









TCACGTGTGTGGTGGTGGACG









TGGGCCAGGGTGACCCCGAG









GTGCAGTTCTCCTGGTTCGTG









GACAACGTGGAGGTGCGCAC









GGCCAGGACAAAGCCGAGAG









AGGAGCAGTTCAACAGCACC









TTCCGCGTGGTCAGCGCCCTG









CCCATCCAGCACGACCACTGG









ACTGGAGGAAAGGAGTTCAA









GTGCAAGGTCCACAGCAAAG









GCCTCCCGGCCCCCATCGTGA









GGACCATCTCCAGGGCCAAA









GGGCAGGCCCGGGAGCCGCA









GGTGTACGTCCTGGCCCCACC









CCAGGAAGAGCTCAGCAAAA









GCACGCTCAGCGICACCTGCC









TGGTCACCGGCTTCTACCCAG









ACTACATCCICCGTGGAGTGGC









AGAGAGCGCGGCAGCCTGAG









TCGGAGGACAAGTACGGCAC









GACCACATCCCAGCTGGACGC









CGACGGCTCCTACTTCCTGTA









CAGCAGGCTCAGGGTGGACA









AGAGCAGCTGGCAAAGAGGA









GACACCTACGCGTGTGTGGTG









ATGCACGAGGCTCTGCACAAC









CACTACACACAGAACITCGATC









TCTAAGCCTCCGGGTAAATGA









(SEQ ID NO: 45)










Ovine
Ig
CCATCCGTCTTCCTCTTCAAA
PSVFLFKPSEEQLRTGTVS
X54110
Not
Jenne C.N. et al.,



light
kappa
CCATCTGAGGAACAGCTGAG
VVCLVNDFYPKDINVKVK

registered
Dev. Comp.



chain
(CK)
GACCGGAACTGTCTCTGTCGT
VDGVTQNSNFQNSFTDQD


Immunol. 30 (1-



constant

GTGCTTGGTGAATGATTTCTA
SKKSTYSLSSTLTLSSSEY


2), 165-174



region

CCCCAAAGATATCAATGTCAA
QSHNAYACEVSHKSLPTA


(2006). PMID:





GGTGAAAGTGGATGGGGTTA
LVKSFNKNEC* (SEQ ID


16083958





CCCAGAACAGCAACTTCCAG
NO: 46)








AACAGCTTCACAGACCAGGA









CAGCAAGAAAAGCACCTACA









GCCTCAGCAGCACCCTGACA









CTGTCCAGCTCAGAGTACCAG









AGCCATAACGCCTATGCGTGT









GAGGTCAGCCACAAGAGCCT









GCCCACCGCCCTCGTCAAGA









GCTTCAATAAGAATGAATGTT









AG (SEQ ID NO: 47)











Ig
GGTCAGCCCAAGTCCGCACC
GQPKSAPSVTLFPPSTEEL
AY734681






lambda
CTCGGTCACCCTGTTCCCGCC
STNKATVVCLINDFYPGS







(CL)
TTCCACGGAGGAGCTCAGTAC
VNVVWKADGSTINQNVK








CAACAAGGCCACCGTGGTGT
TTQASKQSNSKYAASSYL








GTCTCATCAACGACTTCTACC
TLTGSEWKSKSSYTCEVT








CGGGTAGCGTGAACGTGGTCT
HEGSTVTKTVKPSECS*








GGAAGGCAGATGGCAGCACC
(SEQ ID NO: 48)








ATCAATCAGAACGTGAAGACC









ACCCAGGCCTCCAAACAGAG









CAACAGCAAGTACGCGGCCA









GCAGCTACCTGACCCTGACGG









GCAGCGAGTGGAAGTCTAAG









AGCAGTTACACCTGCGAGGTC









ACGCACGAGGGGAGCACCGT









GACGAAGACAGTGAAGCCCT









CAGAGTGTTCTTAG (SEQ ID









NO: 49)









Porcine
Porcine
IgG1a
GCCCCCAAGACGGCCCCATCG
APKTAPSVYPLAPCGRDT
U03781
http://ww
Butler J.E. et al.,


(Scienti-
Ig

GTCTACCCTCTGGCCCCCTGC
SGPNVALGCASSYFPEPV

w.imgt.or
Immunogenetics


fic
heavy

GGCAGGGACACGTCTGGCCC
TMTWNSGALTSGVHTFPS

g/IMGTre
61(3): 209-230


Name:
chain

TAACGTGGCCTTGGGCTGCCT
VLQPSGLYSLSSMVTVPAS

pertoire/i
(2009). PMID:



Sus

constant

GGCCTCAAGCTACTFCCCCGA
SLSSKSYTCNVNHPATTTK

ndex.php
19048248


scrofa)
region

GCCAGTGACCATGACCTGGA
VDKRVGTKTKPPCPICPGC

?section = 
Kacskovics I. et



(CH1-

ACTCGGGCGCCCTGACCAGT
EVAGPSVFIFPPKPKDTLM

LocusGe
al., J. Immunol.



CH3)

GGCGTGCATACCTTCCCATCC
ISQTPEVTCVVVDVSKEH

nes & repe
153(8): 3565-





GTCCTGCAGCCGTCAGGGCTC
AEVQFSWYVDGVEVHTA

rtoire = ge
3573 (1994).





TACTCCCTCAGCAGCATGGTG
ETRPKEEQFNSTYRVVSV

netable & s
PMID: 7930579





ACCGTGCCGGCCAGCAGCCT
LPIQHQDWLKGKEFKCKV

pecies = Pi






GTCCAGCAAGAGCTACACCT
NNVDLPAPITRTISKAIGQS

g & group =






GCAATGTCAACCACCCGGCCA
REPQVYTLPPPAEELSRSK

IGHC






CCACCACCAAGGTGGACAAG
VTVTCLVIGFYPPDIHVEW








CGTGTTGGAACAAAGACCAA
KSNGQPEPEGNYRTTPPQ








ACCACCATGTCCCATATGCCC
QDVDGTFFLYSKLAVDKA








AGGCTGTGAAGTGGCCGGGC
RWDHGETFECAVMHEAL








CCTCGGTCTTCATCTTCCCTCC
HNHYTQKSISKTQGK*








AAAACCCAAGGACACCCTCA
(SEQ ID NO: 50)








TGATCTCCCAGACCCCCGAGG









TCACGTGCGTGGTGGTGGAC









GTCAGCAAGGAGCACGCCGA









GGTCCAGTTCTCCTGGTACGT









GGACGGCGTAGAGGTGCACA









CGGCCGAGACGAGACCAAAG









GAGGAGCAGTTCAACAGCAC









CTACCGTGTGGTCAGCGICCT









GCCCATCCAGCACCAGGACTG









GCTGAAGGGGAAGGAGTTCA









AGTGCAAGGTCAACAACGTA









GACCTCCCAGCCCCCATCACG









AGGACCATCTCCAAGGCTATA









GGGCAGAGCCGGGAGCCGCA









GGTGTACACCCTGCCCCCACC









CGCCGAGGAGCTGTCCAGGA









GCAAAGTCACCGTAACCTGCC









TGGTCATTGGCTTCTACCCAC









CTGACATCCATGTTGAGTGGA









AGAGCAACGGACAGCCGGAG









CCAGAGGGCAAFTACCGCACC









ACCCCGCCCCAGCAGGACGT









GGACGGGACCTTCTTCCTGTA









CAGCAAGCTCGCGGTGGACA









AGGCAAGATGGGACCATGGA









GAAACATTTGAGTGTGCGGTG









ATGCACGAGGCTCTGCACAAC









CACTACACCCAGAAGTCCATC









TCCAAGACTCAGGGTAAATGA









(SEQ ID NO: 51)











IgG1b
GCCCCCAAGACGGCCCCATCG
APKTAPSVYPLAPCGRDV
U03778







GTCTACCCTCTGGCCCCCTGC
SGPNVALGCLASSYFPEPV








GGCAGGGACGTGTCTGGCCCT
TVTWNSGALTSGVHTFPS








AACGTGGCCTTGGGCTGCCTG
VLQPSGLYSLSSMVTVPAS








GCCTCAAGCTACTTCCCCGAG
SLSSKSYTCNVNHPATTTK








CCAGTGACCGTGACCTGGAA
VDKRVGIHQPQTCPICPGC








CTCGGGCGCCCTGACCAGTG
EVAGPSVFIFPPKPKDTLM








GCGTGCACACCTTCCCATCCG
ISQTEVTCVVVDVSKEH








TCCTGCAGCCGTCAGGGCTCT
AEVQFSWYVDGVEVHTA








ACTCCCTCAGCAGCATGGTGA
ETRPKEEQFNSTYRVVSC








CCGTGCCGGCCAGCAGCCTGT
LPIQHQDWLKGKEFKCKV








CCAGCAAGAGCTACACCTGC
NNVDLPAPITRTISKAIGQS








AATGTCAACCACCCGGCCACC
REPQVYTLPPPAEELSRSK








ACCACCAAGGTGGACAAGCG
VTLTCLVIGFYPPDIHVEW








TGTTGGAATACACCAGCCGCA
KSNGQPEPENTYRTTPPQ








AACATGTCCCATATGCCCAGG
QDVDGTFFLYSKLAVDKA








CTGTGAAGTGGCCGGGCCCTC
RWDHGDKFECAVMHEAL








GGTCTTCATCTTCCCTCCAAA
HNHYTQKSISKTQGK*








ACCCAAGGACACCCTCATGAT
(SEQ ID NO: 52)








CTCCCAGACCCCCGAGGTCAC









GTGCGTGGTGGTGGACGTCA









GCAAGGAGCACGCCGAGGTC









CAGTTCTCCTGGTACGTGGAC









GGCGTAGAGGTGCACACGGC









CGAGACGAGACCAAAGGAGG









AGCAGTTCAACAGCACCTACC









GTGTGGTCAGCGTCCTGCCCA









TCCAGCACCAGGACTGGCTG









AAGGGGAAGGAGTTCAAGTG









CAAGGTCAACAACGTAGACC









TCCCAGCCCCCATCACGAGGA









CCATCTCCAAGGCTATAGGGC









AGAGCCGGGAGCCGCAGGTG









TACACCCTGCCCCCACCCGCC









GAGGAGCTGTCCAGGAGCAA









AGTCACGCTAACCTGCCTGGT









CATTGGCTTCTACCCACCTGA









CATCCATGTTGAGTGGAAGAG









CAACGGACAGCCGGAGCCAG









AGAACACATACCGCACCACCC









CGCCCCAGCAGGACGTGGAC









GGGACCTTCTTCCTGTACAGC









AAACTCGCGGTGGACAAGGC









AAGATGGGACCATGGAGACA









AATTTGAGTGTGCGGTGATGC









ACGAGGCTCTGCACAACCACT









ACACCCAGAAGTCCATCTCCA









AGACTCAGGGTAAATGA (SEQ









ID NO: 53)











IgG2a
GCCCCCAAGACGGCCCCATCG
APKTAPSVYPLAPCSRDTS
U03779







GTCTACCCTCTGGCCCCCTGC
GPNVALGCLASSYFPEPVT








AGCAGGGACACGTCTGGCCC
VTWNSGALSSGVHTFPSV








TAACGTGGCCTTGGGCTGCCT
LQPSGLYSLSSMVTVPASS








GGCCTCAAGCTACTTCCCCGA
LSSKSYTCNVNHPATTTK








GCCAGTGACCGTGACCTGGA
VDKRVGTKTKPPCPICPAC








ACTCGGGCGCCCTGTCCAGTG
ESPGPSVFIFPPKPKDTLMI








GCGTGCATACCTTCCCATCCG
SRTPQVTCVVVDVSQENP








TCCTGCAGCCGTCAGGGCTCT
EVQFSWYVDGVEVHTAQ








ACTCCCTCAGCAGCATGGTGA
TRPKEEQFNSTYRVVSVLP








CCGTGCCGGCCAGCAGCCTGT
IQHQDWLNGKEFKCKVN








CCAGCAAGAGCTACACCTGC
NKDLPAPITRIISKAKGQT








AATGTCAACCACCCGGCCACC
REPQVYTLPPHAEELSRSK








ACCACCAAGGTGGACAAGCG
VSITCLVIGFYPPDIDVEW








TGTTGGAACAAAGACCAAAC
QRNGQPEPEGNYRTTPPQ








CACCATGTCCCATATGCCCAG
QDVDGTYFLYSKFSVDKA








CCTGTGAATCCCAGGGCCCT
SWQGGGIFQCAVMHEAL








CGGTCTTCATCTTCCCTCCAA
HNHYTQKSISKTPGK*








AACCCAAGGACACCCTCATGA
(SEQ ID NO: 54)








TCTCCCGGACACCCCAGGTCA









CGTGCGTGGTGGTTGATGTGA









GCCAGGAGAACCCGGAGGTC









CAGTTCTCCTGGTACGTGGAC









GGCGTAGAGGTGCACACGGC









CCAGACGAGGCCAAAGGAGG









AGCAGTTCAACAGCACCTACC









GCGTGGTCAGCGTCCTACCCA









TCCAGCACCAGGACTGGCTG









AACGGGAAGGAGTTCAAGTG









CAAGGTCAACAACAAAGACC









TCCCAGCCCCCATCACAAGGA









TCATCTCCAAGGCCAAAGGGC









AGACCCGGGAGCCGCAGGTG









TACACCCTGCCCCCACACGCC









GAGGAGCTGTCCAGGAGCAA









AGTCAGCATAACCTGCCTGGT









CATTGGCTTCTACCCACCTGA









CATCGATGTCGAGTGGCAAAG









AAACGGACAGCCGGAGCCAG









AGGGCAATTACCGCACCACCC









CGCCCCAGCAGGACGTGGAC









GGGACCTACTTCCTGTACAGC









AAGTTCTCGGTGGACAAGGC









CAGCTGGCAGGGTGGAGGCA









TATTCCAGTGTGCGGTGATGC









ACGAGGCTCTGCACAACCACT









ACACCCAGAAGTCTATCTCCA









AGACTCCGGGTAAATGA (SEQ









ID NO: 55)











IgG2b
GCCCCCAAGACGGCCCCATTG
APKTAPLVYPLAPCGRDT
U03780







GTCTACCCTCTGGCCCCCTGC
SGPNVALGCLASSYFPEPV








GGCAGGGACACGTCTGGCCC
TVTWNSGALTSGVHTFPS








TAACGTGGCCTTGGGCTGCCT
VLQPSGLYSLSSMVTVPAS








GGCCTCAAGCTACTTCCCCGA
SLSSKSYTCNVNHPATTTK








GCCAGTGACCGTGACCTGGA
VDKRVGTKTKPPCPICPAC








ACTCGGGCGCCCTGACCAGT
ESPGPSVFIFPPKPKDTLMI








GGCGTGCATACCTTCCCATCC
SRTPQVTCVVVDVSQENP








GTCCTGCAGCCGTCAGGGCTC
EVQFSWYVDGVEVHTAQ








TACTCCCTCAGCAGCATGGTG
TRPKEFQFNSTYRVVSVLP








ACCGTGCCGGCCAGCAGCCT
IQHQDWLNGKEFKCKVN








GTCCAGCAAGAGCTACACCT
NKDLPAPITRIISKAKGQT








GCAATGTCAACCACCCGGCCA
REPQVYTLPPHAEELSRSK








CCACCACCAAGGTGGACAAG
VSITCLVIGFYPPDIDVEW








CGTGTTGGAACAAAGACCAA
QRNGQPEPEGNYRTTPPQ








ACCACCATGTCCCATATGCCC
QDVDGTYFLYSKFSVDKA








AGCCTGTGAATCGCCAGGGCC
SWQGGGIFQCAVMHEAL








CTCGGTCTTCATCTTCCCTCCA
HNHYTQKSISKTPGK*








AAACCCAAGGACACCCTCAT
(SEQ ID NO: 56)








GATCTCCCGGACACCCCAGGT









CACGTGCGTGGTAGTTGATGT









GAGCCAGGAGAACCCGGAGG









TCCAGTTCTCCTGGTACGTGG









ACGGCGTAGAGGTGCACACG









GCCCAGACGAGGCCAAAGGA









GGAGCAGTTCAACAGCACCT









ACCGCGTGGTCAGCGTCCTGC









CCATCCAGCACCAGGACTGGC









TGAACGGGAAGGAGTTCAAG









TGCAAGGTCAACAACAAAGA









CCTCCCAGCCCCCATCACAAG









GATCATCTCCAAGGCCAAAGG









GCAGACCCGGGAGCCGCAGG









TGTACACCCTGCCCCCACACG









CCGAGGAGCTGTCCAGGAGC









AAAGTCAGCATAACCTGCCTG









GTCATTGGCTTCTACCCACCT









GACATCGATGTCGAGTGGCAA









AGAAACGGACAGCCGGAGCC









AGAGGGCAATTACCGCACCA









CCCCGCCCCAGCAGGACGTG









GACGGGACCTACTTCCTGTAC









AGCAAGTTCTCGGTGGACAA









GGCCAGCTGGCAGGGTGGAG









GCATATTCCAGTGTGCGGTGA









TGCACGAGGCTCTGCACAAC









CACTACACCCAGAAGTCTATC









TCCAAGACTCCGGGTAAATGA









(SEQ ID NO: 57)











IgG3
GCCTACAACACAGCTCCATCG
AYNTAPSVYPLAPCGRDV
EU372658







GTCTACCCTCTGGCCCCCTGT
SDHNVALGCLVSSYFPEPV








GGCAGGGACGTGTCTGATCAT
TVTWNSGALSRVVHTFPS








AACGTGGCCTTGGGCTGCCTT
VLQPSGLYSLSSMVIVAAS








GTCTCAAGCTACTTCCCCGAG
SLSTLSYTCNVYHPATNTK








CCAGTGACCGTGACCTGGAA
VDKRVDIEPPTPICPEICSC








CTCGGGTGCCCTGTCCAGAGT
PAAEVLGAPSVFLFPPKPK








CGTGCATACCTTCCCATCCGT
DILMISRTPKVTCVVVDVS








CCTGCAGCCGTCAGGGCTCTA
QEEAEVQFSWYVDGVQL








CTCCCTCAGCAGCATGGTGAT
YTAQTRPMEEQFNSTYRV








CGTGGCGGCCAGCAGCCTGT
VSVLPIQHQDWLKGKEFK








CCACCCTGAGCTACACGTGCA
CKVNNKDLLSPITRTISKA








ACGTCTACCACCCGGCCACCA
TGPSRVPQVYTLPPAWEEL








ACACCAAGGTGGACAAGCGT
SKSKVSITCLCTGFYPPDI








GTTGACATCGAACCCCCCACA
DVEWQSNGQQEPEGNYR








CCCATCTGTCCCGAAATTTGC
TTPPQQDVDGTYFLYSKL








TCATGCCCAGCTGCAGAGGTC
AVDKVRWQRGDLFQCAV








CTGGGAGCACCGTCGGTCTTC
MHEALHNHYTQKSISKTQ








CTCTTCCCTCCAAAACCCAAG
GK (SEQ ID NO: 58)








GACATCCTCATGATCTCCCGG









ACACCCAAGGTCACGTGCGT









GGTGGTGGACGTGAGCCAGG









AGGAGGCTGAAGTCCAGTTC









TCCTGGTACGTGGACCCCGTA









CAGTTGTACACGGCCCAGAC









GAGGCCAATGGAGGAGCAGT









TCAACAGCACCTACCGCGTGG









TCAGCGTCCTGCCCATCCAGC









ACCAGGACTGGCTGAAGGGG









AAGGAGTTCAAGTGCAAGGT









CAACAACAAAGACCTCCTTTC









CCCCATCACGAGGACCATCTC









CAAGGCTACAGGGCCGAGCC









GGGTGCCGCAGGTGTACACC









CTGCCCCCAGCCTGGGAAGA









GCTGTCCAAGAGCAAAGTCA









GCATAACCTGCCTGGTCACTG









GCTTCTACCCACCTGACATCG









ATGTCGAGTGGCAGAGCAAC









GGACAACAAGAGCCAGAGGG









CAATTACCGCACCACCCCGCC









CCAGCAGGACGTGGATGGGA









CCTACTTCCTGTACAGCAAGC









TCGCGGTGGACAAGGTCAGG









TGGCAGCGTGGAGACCTATTC









CAGTGTGCGGTGATGCACGA









GGCTCTGCACAACCACTACAC









CCAGAAGTCCATCTCCAAGAC









TCAGGGTAAATGA (SEQ ID









NO: 59)











IgG4a
ACCTTCCCATCCGTCCTGCAG
TFPSVLQPSGLYSLSSMVT
U03782







CCGTCAGGGCTCTACTCCCTC
VPASSLSSKSYTCNVNHPA








AGCAGCATGGTGACCGTGCC
TTTKVDKRVGTKTKPPCPI








GGCCAGCAGCCTGTCCAGCA
CPACEGPGPSAFIFPPKPK








AGAGCTACACCTGCAATGTCA
DTLMISRTPKVTCVVVDV








ACCACCCGGCCACCACCACC
SQENPEVQFSWYVDGVE








AAGGTGGACAAGCGTGTTGG
VHTAQTRPKEEQFNSTYR








AACAAAGACCAAACCACCAT
VVSVLPIQHQDWLNGKEF








GTCCCATATGCCCAGCCTGTG
KCKVNNKDLPAPITRIISK








AAGGGCCCGGGCCCTCGGCC
AKGQTREPQVYTLPPPTE








TTCATCTTCCCTCCAAAACCC
ELSRSKVTLTCLVTGFYPP








AAGGACACCCTCATGATCTCC
DIDVEWQRNGQPEPEGNY








CGGACCCCCAAGGTCACGTG
RTTPPQQDVDGTYFLYSK








CGTGGTGGTAGATGTGAGCCA
LAVDKASWQRGDTFQCA








GGAGAACCCGGAGGTCCAGT
VMHEALHNHYTQKSIFKT








TCTCCTGGTACGTGGACGGCG
PGK* (SEQ ID NO: 60)








TAGAGGTGCACACGGCCCAG









ACGAGGCCAAAGGAGGAGCA









GTTCAACAGCACCTACCGCGT









GGTCAGCGTCCTGCCCATCCA









GCACCAGGACTGGCTGAACG









GGAAGGAGTTCAAGTGCAAG









GTCAACAACAAAGACCTCCC









AGCCCCCATCACAAGGATCAT









CTCCAAGGCCAAAGGGCAGA









CCCGGGAGCCGCAGGTGTAC









ACCCTGCCCCCACCCACCGAG









GAGCTGTCCAGGAGCAAAGT









CACGCTAACCTGCCTGGTCAC









TGGCTTCTACCCACCTGACAT









CGATGTCGAGTGGCAAAGAA









ACGGACAGCCGGAGCCAGAG









GGCAATTACCGCACCACCCCG









CCCCAGCAGGACGTGGACGG









GACCTACTTCCTGTACAGCAA









GCTCGCGGTGGACAAGGCCA









GCTGGCAGCGTGGAGACACA









TTCCAGTGTGCGGTGATGCAC









GAGGCTCTGCACAACCACTAC









ACCCAGAAGTCCATCTTCAAG









ACTCCGGGTAAATGA (SEQ ID









NO: 61)











IgG4b
GCCCCCAAGACGGCCCCATCG
APKTAPSVYPLAPCGRDV
EU372654







GTCTACCCTCTGGCCCCCTGC
SGPNVALGCLASSYFPEPV








GGCAGGGACGTGTCTGGCCCT
TVTWNSGALTSGVHTFPS








AACGTGGCCTTGGGCTGCCTG
VLQPSGLYSLSSMVTVPAS








GCCTCAAGCTACTTCCCCGAG
SLSSKSYTCNVNHPATTTK








CCAGTGACCGTGACCTGGAA
VDKRVGIHQPQTCPICPAC








CTCGGGCGCCCTGACCAGTG
EGPGPSAFIFPPKPKDTLM








GCGTGCACACCTTCCCATCCG
ISRTPKVTCVVVDVSQEN








TCCTGCAGCCGTCAGGGCTCT
PEVQFSWYVDGVEVHTA








ACTCCCTCAGCAGCATGGTGA
QTRPKEEQFNSTYRVVSV








CCGTGCCGGCCAGCAGCCTGT
LLIQHQDWLNGKEFKCK








CCAGCAAGAGCTACACCTGC
VNNKDLPAPITRIISKAKG








AATGTCAACCACCCGGCCACC
QTREPQVYTLPPPTEELSR








ACCACCAAGGTGGACAAGCG
SKVTLTCLVTGFYPPDIDV








TGTTGGAATACACCAGCCGCA
EWQRNGQPEPEGNYRTTP








AACATGTCCCATAIGCCCAGC
PQQDVDGTYFLYSKLAVD








CTGTGAAGGGCCCGGGCCCT
KASWQRGDTFQCAVMHE








CGGCCTTCATCTTCCCTCCAA
ALHNGYT (SEQ ID NO:








AACCCAAGGACACCCTCATGA
62)








TCTCCCGGACCCCCAAGGTCA









CGTGCGTGGTGGTTGATGTGA









GCCAGGAGAACCCGGAGGTC









CAGTTCTCCTGGTACGTGGAC









GGCGTAGAGGTGCACACGGC









CCAGACGAGGCCAAAGGAGG









AGCAGTTCAACAGCACCTACC









GCGTGGTCAGCGTCCTGCTCA









TCCAGCACCAGGACTGGCTG









AACGGGAAGGAGTTCAAGTG









CAAGGTCAACAACAAAGACC









TCCCAGCCCCCATCACAAGGA









TCATCTCCAAGGCCAAAGGGC









AGACCCGGGAGCCGCAGGTG









TACACCCTGCCCCCACCCACC









GAGGAGCTGTCCAGGAGCAA









AGTCACGCTAACCTGCCTGGT









CACTGGCTTCTACCCACCTGA









CATCGATGTCGAGTGGCAAAG









AAACGGACAGCCGGAGCCAG









AGGGCAATTACCGCACCACCC









CGCCCCAGCAGGACGTGGAC









GGGACCTACTTCCTGTACAGC









AAGCTCGCGGTGGACAAGGC









CAGCTGGCAGCGTGGAGACA









CATTCCAGTGTGCGGTGATGC









ACGAGGCTCTGCACAACCACT









ACACCC (SEQ ID NO: 63)











IgG5a
GCCCCCAAGACGGCCCCATCG
APKTAPSVYPLAPCSRDTS
EU372657







GTCTACCCTCTGGCCCCCTGC
GPNVALGCLVSSYFPEPVT








AGCAGGGACACGTCTGGCCC
VTWNSGALTSGVHTFPSV








TAACGTGGCCTTGGGCTGCCT
LQPSGLYSLSSMVTVPAHS








GGTCTCAAGCTACTTCCCCGA
LSSKRYTCNVNHPATKTK








GCCAGTGACCGTGACCTGGA
VDLCVGRPCPICPGCEVA








ACTCGGGCGCCCTGACCAGT
GPSVFIFPPKPKDILMISRT








GGCGTGCACACCTTCCCATCC
PEVTCVVVDVSKEHAEV








GTCCTGCAGCCGTCAGGGCTC
QFSWYVDGEEVHTAEFRP








TACTCCCTCAGCAGCATGGTG
KEEQFNSTYRVVSVLPIQH








ACCGTGCCGGCCCACAGCTTG
EDWLKGKEFECKVNNED








TCCAGCAAGCGCTATACGTGC
LPGPITRTISKAKGVVRSP








AATGTCAACCACCCAGCCACC
EVYTLPPPAEELSKSIVTLT








AAAACCAAGGTGGACCTGTG
CLVKSIFP?FIHVEWKING








TGTTGGACGACCATGTCCCAT
KPEPENAYRTTPPQEDEDR








ATGCCCAGGCTGTGAAGTGGC
TYFLYSKLAVDKARWDH








CGGGCCCTCGGTCTTCATCTT
GETFECAVMHEALHNHY








CCCTCCAAAACCCAAGGACAT
TQKSISKTQGK* (SEQ ID








CCTCATGATCTCCCGGACCCC
NO: 64)








CGAGGTCACGTGCGTGGTGG









TGGACGTCAGCAAGGAGCAC









GCCGAGGTCCAGTTCTCCTGG









TACGTGGACGGCGAAGAGGT









GCACACGGCCGAGACGAGGC









CAAAGGAGGAGCAGTTCAAC









AGCACCTACCGCGTGGTCAGC









GTCCTGCCCATCCAGCACGAG









GACTGGCTGAAGGGGAAGGA









GTTCGAGTGCAAGGTCAACA









ACGAAGACCTCCCAGGCCCC









ATCACGAGGACCATCTCCAAG









GCCAAAGGGGTGGTACGGAG









CCCGGAGGTGTACACCCTGCC









CCCACCCGCCGAGGAGCTGT









CCAAGAGCATAGTCACGCTAA









CCTGCCTGGTCAAAAGCATCT









TCCCGNCTTTCATCCATGTTG









AGTGGAAAATCAACGGAAAA









CCAGAGCCAGAGAACGCATAT









CGCACCACCCCGCCTCAGGA









GGACGAGGACAGGACCTACT









TCCTGTACAGCAAGCTCGCGG









TGGACAAGGCAAGATGGGAC









CATGGAGAAACATTTGAGTGT









GCGGTGATGCACGAGGCTCTG









CACAACCACTACACCCAGAA









GTCCATCTCCAAGACTCAGGG









TAAATGA (SEQ ID NO: 65)











IgG5b
GCCTACAACACAGCTCCATCG
AYNTAPSVYPLAPCGRDV
EU372656







GTCTACCCTCTGGCCCCCTGT
SDHNVALGCLVSSYFPEPV








GGCAGGGACGTGTCTGATCAT
TVTWNWGAQTSGVHTFP








AACGTGGCCTTGGGCTGCCTG
SVLQPSGLYSLSSTVTVPA








GTCTCAAGCTACTTCCCCGAG
HSLSSKCFTCNVNHPATTT








CCAGTGACCGTGACCTGGAA
KVDLCVGKKTKPRCPICP








CTGGGGCGCCCAGACCAGTG
GCEVAGPSVFIFPPKPKDIL








GCGTGCACACCTTCCCATCCG
MISRTPEVTCVVVDVSKE








TCCTGCAGCCGTCAGGGCTCT
HAEVQFSWYVDGEEVHT








ACTCCCTCAGCAGCACGGTG
AETRPKEEQFNSTYRVVS








ACCGTGCCGGCCCACAGCTTG
VLPIQHEDWLKGKEFECK








TCCAGCAAGTGCTTCACGTGC
VNNEDLPGPITRTISKAKG








AATGTCAACCACCCGGCCACC
VVRSPEVYTLPPPAEELSK








ACCACCAAGGTGGACCTGTG
SIVTLTCLVKSFFPPFIHVE








TGTTGGAAAAAAGACCAAGC
WKINGKPEPENAYRTTPP








CTCGATGTCCCATATGCCCAG
QEDEDGTYFLYSKFSVEK








GCTGTGAAGTGGCCGGGCCC
FRWHSGGIHCAVMHEAL








TCGGTCTTCATCTTCCCTCCA
HNHYT (SEQ ID NO: 66)








AAACCCAAGGACATCCTCATG









ATCTCCCGGACCCCCGAGGTC









ACGTGCGTGGTGGTGGACGT









CAGCAAGGAGCACGCCGAGG









TCCAGTTCTCCTGGTACGTGG









ACGGCGAAGAGGTGCACACG









GCCGAGACGAGACCAAAGGA









GGAGCAGTTCAACAGCACTT









ACCGCGTGGTCAGCGTCCTGC









CCATCCAGCACGAGGACTGG









CTGAAGGGGAAGGAGTTCGA









GTGCAAGGTCAACAACGAAG









ACCTCCCAGGCCCCATCACGA









GGACCATCTCCAAGGCCAAA









GGGGTGGTACGGAGCCCGGA









GGTGTACACCCTGCCCCCACC









CGCCGAGGAGCTGTCCAAGA









GCATAGTCACGCTAACCTGCC









TGGTCAAAAGCTTCTTCCCGC









CTTTCATCCATGTTGAGTGGA









AAATCAACGGAAAACCAGAG









CCAGAGAACGCATACCGCAC









CACCCCGCCCCAGGAGGACG









AGGACGGGACCTACTTCCTGT









ACAGCAAGTTCTCGGTGGAA









AAGTTCAGGTGGCACAGTGG









AGGCATCCACTGTGCGGTGAT









GCACGAGGCTCTGCACAACC









ACTACACCC (SEQ ID NO: 67)











IgG6 
GCCCCCAAGACGGCCCCATCG
APKTAPSVYPLAPCGRDT
EU372655







GTCTACCCTCTGGCCCCCTGC
SGPNVALGCLASSYFPEPV








GGCAGGGACACGTCTGGCCC
TLTWNSGALTSGVHTFPS








TAACGTGGCCTTGGGCTGCCT
VLQPSGLYSLSSMVTVPAS








GGCCTCAAGCTACTTCCCCGA
SLSSKSYTCNVNHPATTTK








GCCAGTGACCCTGACCTGGA
VDLCVGRPCPICPACEGPG








ACTCGGGCGCCCTGACCAGT
PSVFIFPPKPKDTLMISRTP








GGCGTGCATACCTTCCCATCC
QVTCVVVDVSQENPEVQF








GTCCTGCAGCCGTCAGGGCTC
SWYVDGVEVHTAQTRPK








TACTCCCTCAGCAGCATGGTG
EAQFNSTYRVVSVLPIQHE








ACCGTGCCGGCCAGCAGCCT
DWLKGKEFECKVNNKDL








GTCCAGCAAGAGCTACACCT
PAPITRIISKAKGPSREPQV








GCAATGTCAACCACCCGGCCA
YTLSPSAEELSRSKVSITCL








CCACCACCAAGGTGGACCTG
VTGFYPPDIDVEWKSNGQ








TGTGTTGGACGACCATGTCCC
PEPEGNYRTTPPQQDVDG








ATATGCCCAGCCTGTGAAGGG
TYFLYSKLAVDKASWQRG








CCCGGGCCCTCGGTCTTCATC
DPFQCAVMHEALHNHYT








TTCCCTCCAAAACCCAAGGAC
(SEQ ID NO: 68)








ACCCTCATGATCTCCCGGACA









CCCCAGGTCACGTGCGTGGTG









GTAGATGTGAGCCAGGAAAA









CCCGGAGGTCCAGTTCTCCTG









GTATGTGGACGGTGTAGAGGT









GCACACGGCCCAGACGAGGC









CAAAGGAGGCGCAGTTCAAC









AGCACCTACCGTGTGGTCAGC









GTCCTGCCCATCCAGCACGAG









GACTGGCTGAAGGGGAAGGA









GTTCGAGTGCAAGGTCAACA









ACAAAGACCTCCAGCCCCCA









TCACAAGGATCATCTCCAAGG









CCAAAGGGCCGAGCCGGGAG









CCGCAGGTGTACACCCTGTCC









CCATCCGCCGAGGAGCTGTCC









AGGAGCAAAGTCAGCATAAC









CTGCCTGGTCACTGGCTTCTA









CCCACCTGACATCGATGTCGA









GTGGAAGAGCAACGGACAGC









CGGAGCCAGAGGGCAATTAC









CGCACCACCCCGCCCCAGCA









GGACGTGGACGGGACCTACT









TCCTGTACAGCAAGCTCGCGG









TGGACAAGGCCAGCTGGCAG









CGTGGAGACCCATTCCAGTGT









GCGGTGATGCACGAGGCTCTG









CACAACCACTACACCC (SEQ









ID NO: 69)











IgG6b
GCCCCCAAGACGGCCCCATCG
APKTAPSVYPLAPCGRDT
EU372653







GTCTACCCTCTGGCCCCCTGC
SGPNVALGCLASSYFPEPV








GGCAGGGACACGTCTGGCCC
TVTWNSGALTSGVHTFPS








TAACGTGGCCTTGGGCTGCCT
VLQPSGLYSLSSTVTVPAR








GGCCTCAAGCTACTTCCCCGA
SSSRKCFTCNVNHPATTTK








GCCAGTGACCGTGACCTGGA
VDLCVGRPCPICPACEGN








ACTCGGGCGCCCTGACCAGT
GPSVFIFPPKPKDTLMISRT








GGCGTGCACACCTTCCCATCC
PEVTCVVVDVSQENPEVQ








GTCCTGCAGCCGTCAGGGCTC
FSWYVDGEEVHTAETRPK








TACTCCCTCAGCAGCACGGTG
EEQFNSTYRVVSVLPIQHQ








ACCGTGCCGGCCAGGAGCTC
DWLKGKEFECKVNNKDL








GTCCAGAAAGTGCTTCACGTG
PAPITRIISKAKGPSREPQV








CAATGTCAACCACCCGGCCAC
YTLSPSAEELSRSKVSITCL








CACCACCAAGGTGGACCTGT
VTGFYPPDIDVEWKSNGQ








GTGTTGGACGACCATGTCCCA
PEPEGNYRSTPPQEDEDG








TATGCCCAGCCTGTGAAGGGA
TYFLYSKLAVDKARLQSG








ACGGGCCCTCGGTCTTCATCT
GIHCAVMHEALHNHYTQ








TCCCTCCAAAACCCAAGGAC
KSISKT (SEQ ID NO: 70)








ACCCTCATGATCTCCCGGACC









CCCGAGGTCACGTGCGTGGT









GGTAGATGTGAGCCAGGAAA









ACCCGGAGGTCCAGTTCTCCT









GGTACGTGGACGGCGAAGAG









GTGCACACGGCCGAGACGAG









GCCAAAGGAGGAGCAGTTCA









ACAGCACCTACCGTGTGGTCA









GCGTCCTGCCCATCCAGCACC









AGGACTGGCTGAAGGGAAAG









GAGTTCGAGTGCAAGGTCAA









CAACAAAGACCTCCCAGCCC









CCATCACAAGGATCATCTCCA









AGGCCAAAGGGCCGAGCCGG









GAGCCGCAGGTGTACACCCT









GTCCCCATCCGCCGAGGAGCT









GTCCAGGAGCAAAGTCAGCA









TAACCTGCCTGGTCACTGGCT









TCTACCCACCTGACATCGATG









TCGAGTGGAAGAGCAACGGA









CAGCCGGAGCCAGAGGGCAA









TTACCGCTCCACCCCGCCCCA









GGAGGACGAGGACGGGGACCT









ACTTCCTGTACAGCAAACTCG









CGGTGGACAAGGCGAGGTTG









CAGAGTGGAGGCATCCACTGT









GCGGTGATGCACGAGGCTCTG









CACAACCACTACACCCAGAA









GTCCATCTCCAAGACT (SEQ









ID NO: 71)










Porcine
Ig


FP312898
http://ww
Schwartz J.C. et



Ig
kappa



w.imgt.or
al., Immunogeneti



light
(CK)



g/IMGTre
cs, 64, 303-311



chain
variant



pertoire/i
(2012). PMID:



constant
1



ndex.php
22109540



region




?section = 









LocusGe









nes & repe









rtoire = ge









netable & s









pecies = Pi









g & group =









IGLC








Ig


CU694848






kappa









(CK)









variant









2












Ig


CU467669
http://ww





lambda



w.imgt.or





(CL)



g/IMGTre





variant



pertoire/i





1



ndex.php









?section = 









LocusGe









nes & repe









rtoire = ge









netable & s









pecies = Pi









g & group =









IGKC








Ig


CU467599






lambda









(CK)









variant









2










Water
Water
IgG1?
GAGCGGCGTGCACACCTTCCC
SGVHTFPAVLQSSGLYSLS
NW_005690903
Not
None


buffalo
buffalo

GGCCGTCCTTCAGTCCTCCGG
STVTAPASATKSQTFTCNV

registered



(Scienti-
Ig

GCTCTACTCTCTCAGCAGCAC
AHPASSTKVDKAVVPPCR





fic
heavy

GGTGACCGCGCCCGCCAGCG
PKPCDCCPPPELPGGPSVF





Name:
chain

CCACAAAAAGCCAGACCTTC
IFPPKPKDTLTISGTPEVTC






Bubalus

constant

ACCTGCAACGTAGCCCACCCG
VVVDVGHDDPEVKFSWF






bubalis)

region

GCCAGCAGCACCAAGGTGGA
VDDVEVNTARTKPREEQF






(CH1-

CAAGGCTGTTGTTCCCCCATG
NSTYRVVSALPIQHNDWT






CH3)

CAGACCCGAAACCCTGTGATTG
GGKEFKCKVYNEGLPAPI








CTGCCCACCCCCTGAGCTCCC
VRTISRTKGQAREPQVYV








CGGAGGACCCTCTGTCTTCAT
LAPPQDELSKSTVSITCMV








CTTCCCACCAAAACCCAAGG
TGFYPDYIAVEWQKDGQP








ACACCCTCACAATCTCTGGAA
ESEDKYGTTPPQLDSDGS








CTCCTGAGGTCACGTGTGTGG
YFLYSRLRVNKNSWQEGG








TGGTGGACGTGGGCCACGAT
AYTCVVMHE (SEQ ID NO:








GACCCCGAGGTGAAGTTCTCC
72)








TGGTTCGTGGACGATGTGGAG









GTAAACACAGCCAGGACGAA









GCCAAGAGAGGAGCAGTTCA









ACAGCACCTACCGCGTGGTCA









GCGCCCTGCCCATCCAGCACA









ACGACTGGACTGGAGGAAAG









GAGTTCAAGTGCAAGGTCTAC









AATGAAGGCCTCCCAGCCCCC









ATCGTGAGGACCATCTCCAGG









ACCAAAGGGCAGGCCCGGGA









GCCGCAGGTGTACGTCCTGGC









CCCACCCCAGGACGAGCTCA









GCAAAAGCACGGTCAGCATC









ACTTGCATGGTCACTGGCTTC









TACCCAGACTACATCGCCGTA









GAGTGGCAGAAAGATGGGCA









GCCTGAGTCAGAGGACAAATA









TGGCACGACCCCGCCCCAGCT









GGACAGCGATGGCTCCTACTT









CCTGTACAGCAGGCTCAGGGT









GAACAAGAACAGCTGGCAAG









AAGGAGGCGCCTACACGTGT









GTAGTGATGCATGAGGC (SEQ









ID NO: 73)











IgG2?
GCCTCCATCACAGCCCCGAAA
ASITAPKVYPLTSCRGETS
NW_005766143







GTCTACCCTCTGACTTCTTGC
SSTVTLGCLVSSYMPEPVT








CGCGGGGAAACGTCCAGCTC
VTWNSGALKSGVHTFPAV








CACCGTGACCCTGGGCTGCCT
LQSSGLYSLSSTVTAPASA








GGTCTCCAGCTACATGCCCGA
TKSQTFTCNVAHPASSTK








GCCGGTGACCGTGACCTGGA
VDTAVGFSSDCCKFPKPC








ACTCGGGTGCCCTGAAGAGC
VRGPSVFIFPPKPKDTLMI








GGCGTGCACACCTTCCCGGCC
TGNPEVTCVVVDVGRDN








GTCCTTCAGTCCTCTGGGCTC
PEVQFSWFVGDVEVHTG








TACTCTCTCAGCAGCACGGTG
RSKPREEQFNSTYRVVSTL








ACCGCGCCCGCCAGCGCCAC
PIQHNDWTGGKEFKCKV








AAAAAGCCAGACCTTCACCT
NNKGLPAPIVRTISRTKGQ








GCAACGTAGCCCACCCGGCC
AREPQVYVLAPPQEELSK








AGCAGCACCAAGGTGGACAC
STVSVTCMVTGFYPDYIA








GGCTGTTGGGTTCTCCAGTGA
VEWHRDRQAESEDKYRT








CTGCTGCAAGTTTCCTAAGCC
TPPQLDSDGSYFLYSRLKV








TTGTGTGAGGGGACCATCTGT
NKNSWQEGGAYTCVVMH








CTTCATCTTCCCGCCGAAACC
E (SEQ ID NO: 74)








CAAAGACACCCTGATGATCAC









AGGAAATCCCGAGGTCACATG









TGTGGTGGTGGACGTGGGCC









GGGATAACCCCGAGGTGCAG









TTCTCCTGGTTCGTGGGTGAT









GTGGAGGTGCACACGGGCAG









GTCGAAGCCGAGAGAGGAGC









AGTTCAACAGCACCFACCGCG









TGGTCAGCACCCTGCCCATCC









AGCACAATGACTGGACTGGA









GGAAAGGAGITCAAGTGCAA









GGTCAACAACAAAGGCCTCC









CAGCCCCCATCGTGAGGACCA









TCTCCAGGACCAAAGGGCAG









GCCCGGGAGCCGCAGGTGTA









CGTCCTGGCCCCACCCCAGGA









AGAGCTCAGCAAAAGCACGG









TCAGCGTCACTTGCATGGTCA









CTGGCTTCTACCCAGACTACA









TCGCCGTAGAGTGGCATAGAG









ACCGGCAGGCTGAGTCGGAG









GACAAGTACCGCACGACCCC









GCCCCAGCTGGACAGCGATG









GGTCCTACTTCCTGTACAGCA









GGCTCAAGGTGAACAAGAAC









AGCTGGCAAGAAGGAGGCGC









CTACACGTGTGTAGTGATGCA









TGAGGC (SEQ ID NO: 75)











IgG3?
GCCTCCACCACAGCCCCGAA
ASTTAPKVYPLASSCGDTS
NW_005784206







AGTCTACCCTCTGGCATCCAG
SSTVTLGCLVSSYMPEPVT








CTGCGGGGACACGTCCAGCT
VTWNSGALKNGVHTFPA








CCACCGTGACCCTGGGCTGCC
VRQSSGLYSLSSMVTMPT








TGGTCTCCAGCTACATGCCCG
STAGTQTFTCNVAHPASST








AGCCGGTGACCGTGACCTGG
KVDTAVTARHPVPKTPET








AACTCGGGTGCCCTGAAGAA
PIHPVKPPTQEPRDEKTPC








CGGCGTGCACACCTTCCCGGC
QCPKCPEPLGGLSVFIFPP








CGTCCGGCAGTCCTCCGGGCT
KPKDTLTISGTPEVTCVVV








CTACTCTCTCAGCAGCATGGT
DVGQDDPEVQFSWFVDD








GACCATGCCCACCAGCACCGC
VEVHTARMKPREEQFNST








AGGAACCCAGACCTTCACCT
YRVVSALPIQHQDWLREK








GCAACGTAGCCCACCCGGCC
EFKCKVNNKGLPAPIVRTI








AGCAGCACCAAGGTGGACAC
SRTKGQAREPQVYVLAPP








GGCTGTCACTGCAAGGCATCC
REELSKSTLSLTCLITGFYP








GGTCCCGAAGACACCAGAGA
EEVDVEWQRNGQPESED








CACCTATCCATCCTGTAAAAC
KYHTTPPQLDADGSYFLY








CCCCAACCCAGGAGCCCAGA
SRLRVNRSSWQEGDHYTC








GATGAAAAGACACCCTGCCA
AVMHEALRNHYKEKPISR








GTGTCCCAAATGCCCAGAACC
SPGK* (SEQ ID NO: 76)








TCTGGGAGGACTGTCTGTCTT









CATCTTCCCACCGAAACCCAA









GGACACCCTCACAATCTCTGG









AACGCCCGAGGTCACGTGTG









TGGTGGTGGACGTGGGCCAG









GATGACCCCGAAGTGCAGTTC









TCCTGGTTCGTGGATGACGTG









GAGGTGCACACAGCCAGGAT









GAAGCCAAGAGAGGAGCAGT









TCAACAGCACCTACCGCGTGG









TCAGCGCCCTGCCCATCCAGC









ACCAGGACTGGCTGCGGGAA









AAGGAGTTCAAGTGCAAGGT









CAACAACAAAGGCCTCCCGG









CCCCCATCGTGAGGACCATCT









CCAGGACCAAAGGGCAGGCC









CGGGAGCCACAGGTGTATGTC









CTGGCCCCACCCCGGGAAGA









GCTCAGCAAAAGCACGCTCA









GCCTCACCTGCCTAATCACCG









GCTTCTACCCAGAAGAGGTAG









ACGTGGAGTGGCAGAGAAAT









GGGCAGCCTGAGTCAGAGGA









CAAGTACCACACGACCCCAC









CCCAGCTGGACGCTGACGGC









TCCTACTTCCTGTACAGCAGG









CTCAGGGTGAACAGGAGCAG









CTGGCAGGAAGGAGACCACT









ACACGTGTGCAGTGATGCATG









AAGCTTTACGGAATCACTACA









AAGAGAAGCCCATCTCGAGG









TCTCCGGGTAAATGA (SEQ ID









NO: 77)










Water
Ig
CAGCCCAAGTCCGCACCCTCA
QPKSAPSVTLFPPSTEELS
NW_005690786
Not
None



buffalo
lambda?
GTCACCCTGTTCCCACCCTCC
ANKATLVCLISDFYPGSMT

registered




Ig

ACGGAGGAGCTCAGCGCCAA
VARKADGSTITRNVETTR






light

CAAGGCCACCCTGGTGTGTCT
ASKQSNSKYAASSYLSLT






chain

CATCAGCGACTTCTACCCGGG
GSEWKSKGSYSCEVTHEG






constant

TAGCATGACCGTGGCCAGGA
STVTKTVKPSECS* (SEQ






region

AGGCAGACGGCAGCACCATC
ID NO: 78)






(CL)

ACCCGGAACGTGGAGACCAC









CCGGGCCTCCAAACAGAGCA









ACAGCAAGTACGCGGCCAGC









AGCTACCTGAGCCTGACGGG









CAGCGAGTGGAAATCGAAAG









GCAGTTACAGCTGCGAGGTC









ACGCACGAGGGGAGCACCGT









GACAAAGACAGTGAAGCCCT









CAGAGTGTTCTTAG (SEQ ID









NO: 79)









Human
Human
IgG4
GAGTCCAAATATGGTCCCCCA
ESKYGPPCPSCPAPEFLGG
K01316
http://ww
Ellison J. et al.,


(Scienti-
Ig
variant
TGCCCATCATGCCCAGCACCT
PSVFLFPPKPKDTLMISRT

w.imgt.or
DNA, 1, 11-18


fic
heavy
1
GAGTTCCTGGGGGGACCATCA
PEVTCVVVDVSQEDPEVQ

g/IMGTre
(1981). PMID:


Name:
chain

GTCTTCCTGTTCCCCCCAAAA
FNWYNDGVEVHNAKTKP

pertoire/i
6299662



Homo

constant

CCCAAGGACACTCTCATGATC
REEQFNSTYRVVSVLTVL

ndex.php




sapiens)

region

TCCCGGACCCCTGAGGTCACG
HQDWLNGKEYKCKVSNK

?section = 




(CH1-

TGCGTGGTGGTGGACGTGAG
GLPSSIEKTISKAKGQPRE

LocusGe




CH3)

CCAGGAAGACCCCGAGGTCC
PQVYTLPPSQEEMTKNQV

nes & repe






AGTTCAACTGGTACGTGGATG
SLTCLVKGFYPSDIAVEWE

rtoire = ge






GCGTGGAGGTGCATAATGCCA
SNGQPENNYKTTPPVLDS

netable & s






AGACAAAGCCGCGGGAGGAG
DGSFFLYSRLTVDKSRWQ

pecies = hu






CAGTTCAACAGCACGTACCGT
EGNVFSCSVMHEALHNH

man & gro






GTGGTCAGCGTCCTCACCGTC
YTQKSLSLSLGK* (SEQ ID

up = IGHC






CTGCACCAGGACTGGCTGAA
NO: 12)








CGGCAAGGAGTACAAGTGCA









AGGTCTCCAACAAAGGCCTC









CCGTCCTCCATCGAGAAAACC









ATCTCCAAAGCCAAAGGGCA









GCCCCGAGAGCCACAGGTGT









ACACCCTGCCCCCATCCCAGG









AGGAGATGACCAAGAACCAG









GTCAGCCTGACCTGCCTGGTC









AAAGGCTTCTACCCCAGCGAC









ATCGCCGTGGAGTGGGAGAG









CAATGGGCAGCCGGAGAACA









ACTACAAGACCACGCCTCCCG









TGCTGGACTCCGACGGCTCCT









TCTTCCTCTACAGCAGGCTAA









CCGTGGACAAGAGCAGGTGG









CAGGAGGGGAATGTCTTCTCA









TGCTCCGTGATGCATGAGGCT









CTGCACAACCACTACACACA









GAAGAGCCTCTCCCTGTCTCT









GGGTAAATGA (SEQ ID NO: 14)











1gG4
GAGTCCAAATATGGTCCCCCG
ESKYGPPCPSCPAPEFLGG
AJ001563

Brusco A. et al.,




variant
TGCCCATCATGCCCAGCACCT
PSVFLFPPKPKDTLMISRT


Eur. J.




2
GAGTTCCTGGGGGGACCATCA
PEVTCVVVDVSQEDPEVQ


Immunogenet.,





GTCTTCCTGTTCCCCCCAAAA
FNWYVDGVEVHNAKTKP


25, 349-355





CCCAAGGACACTCTCATGATC
REEQFNSTYRVVSVLTVV


(1998). PMID:





TCCCGGACCCCTGAGGTCACG
HQPWLNGKEYKCKVSNK


9805657





TGCGTGGTGGTGGACGTGAG
GLPSSIEKTISKAKGQPRE








CCAGGAAGACCCCGAGGTCC
PQVYTLPPSQEEMTKNQV








AGTTCAACTGGTACGTGGATG
SLTCLVKGFYPSDIAVEWE








GCGTGGAGGTGCATAATGCCA
SNGQPENNYKTTPPVLDS








AGACAAAGCCGCGGGAGGAG
DGSFFLYSRLTVDKSRWQ








CAGTTCAACAGCACGTACCGT
EGNVFSCSVMHEALHNH








GTGGTCAGCGTCCTCACCGTC
YTQKSLSLSEGK (SEQ ID








GTGCACCAGGACTGGCTGAA
NO: 80)








CGGCAAGGAGTACAAGTGCA









AGGTCTCCAACAAAGGCCTC









CCGTCCTCCATCGAGAAAACC









ATCTCCAAAGCCAAAGGGCA









GCCCCGAGAGCCACAGGTGT









ACACCCTGCCCCCATCCCAGG









AGGAGATGACCAAGAACCAG









GTCAGCCTGACCTGCCTGGTC









AAAGGCTTCTACCCCAGCGAC









ATCGCCGTGGAGTGGGAGAG









CAATGGGCAGCCGGAGAACA









ACTACAAGACCACGCCTCCCG









TGCTGGACTCCGACGGCTCCT









TCTTCCTCTACAGCAGGCTAA









CCGTGGACAAGAGCAGGTGG









CAGGAGGGGAATGTCTTCTCA









TGCTCCGTGATGCATGAGGCT









CTGCACAACCACTACACCXA









GAAGAGCCTCTCCCTGTCTCT









GGGTAAATGA (SEQ ID NO: 81)











IgG4
GCACCTGAGTTCCTGGGGGG
APEFLGGSVFLFPPKPKD
AJ001564






variant
ACCATCAGTCTTCCTGTTCCC
TLMISKTPEVTCVVVDVS







3
CCCAAAACCCAAGGACACTC
QEDPEVQFNWYVDGVEV








TCATGATCTCCCGGACCCCTG
HNAKTKPREEQFNSTYRV








AGGTCACGTGCGTGGTGGTG
VSVLTVLHQDWLNGKEY








GACGTGAGCCAGGAAGACCC
KCKVSNKGLPSSIEKTISK








CGAGGTCCAGTTCAACTGGTA
AKGQPREPQVYTLPPSQE








CGTGGATGGCGTGGAGGTGCA
EMTKNQVSLTCLVKGFYP








TAATGCCAAGACAAAGCCGC
SDIAVEWESNGQPENNYK








GGGAGGAGCAGTTCAACAGC
TTPPVLDSDGSFFLYSKLT








ACGTACCGTGTGGTCAGCGTC
VDKSRWQEGNVFSCSVM








CTCACCGTCCTGCACCAGGAC
HEALHNHYTQKSLSLSLG








TGGCTGAACGGCAAGGAGTA
K* (SEQ ID NO: 82)








CAAGTGCAAGGTCTCCAACA









AAGGCCTCCCGTCCTCCATCG









AGAAAACCATCTCCAAAGCC









AAAGGGCAGCCCCGAGAGCC









ACAGGTGTACACCCTGCCCCC









ATCCCAGGAGGAGATGACCA









AGAACCAGGTCAGCCTGACC









TGCCTGGTCAAAGGCTTCTAC









CCCAGCGACATCGCCGTGGA









GTGGGAGAGCAATGGGCAGC









CGGAGAACAACTACAAGACC









ACGCCTCCCGTGCTGGACTCC









GACGGCTCCTTCTTCCTCTAC









AGCAAGCTCACCGTGGACAA









GAGCAGGTGGCAGGAGGGGA









ACGTCTTCTCATGCTCCGTGA









TGCATGAGGCTCTGCACAACC









ACTACACGCAGAAGAGCCTC









TCCCTGTCTCTGGGTAAATGA









(SEQ ID NO: 83)










Human
Ig
ACTGTGGCTGCACCATCTGTC
TVAAPSVFIFPPSDEQLKS
X96754
http://ww
None



Ig
kappa
TTCATCTTCCCGCCATCTGATG
GTASVVCLLNNFYPREAK

w.imgt.or




light
(CK)
AGCAGTTGAAATCTGGAACTG
VQWKVDNALQSGNSQES

g/IMGTre




chain

CCTCTGTTGTGTGCCTGCTGA
VTEQDSKDSTYSLSSTLTL

perioire/i




constant

ATAACTTCTATCCCAGAGAGG
SKADYEKHKVYACEVTH

ndex.php




region

CCAAAGTACAGTGGAAGGTG
QGLSSPVTKSFNRGEC*

?section =






GATAACGCCCTCCAATCGGGT
(SEQ ID NO: 11)

LocusGe






AACTCCCAGGAGAGTGYCAC


nes & repe






AGAGCAGGACAGCAAGGACA


rtoire = ge






GCACCTACAGCCTCAGCAGC


netable & s






ACCCTGACGCTGAGCAAAGC


pecies = hu






AGACTACGAGAAACACAAAG


man & gro






TCTACGCCTGCGAAGTCACCC


up = IGKC






ATCAGGGCCTGAGCTCGCCCG









TCACAAAGAGCTTCAACAGG









GGAGAGTGTTAG (SEQ ID NO:









13)









Bovine
Bovine
IgG1
GCCTCCACCACAGCCCCGAA
ASTTAPKVYPLSSCCGDK
X62916
hap://ww
Symons D.B. et


(Scienti-
Ig
variant
AGTCTACCCTCTGAGTTCTTG
SSSTVTLGCLVSSYMPEPV

w.imgt.or
al. J.


fic
heavy
1
CTGCGGGGACAAGTCCAGCT
TVTWNSGALKSGVHTFPA

g/IMGTre
Immunogenet.,


Name:
chain

CCACCGTGACCCTGGGCTGCC
VLQSSGLYSLSSMVTVPG

pertoire/i
14, 273-283



Bos

constant

TGGTCTCCAGCTACATGCCCG
STSGQTFTCNVAHPASSTK

ndex.php
(1987). PMID:



taurus)

region

AGCCGGTGACCGTGACCTGG
VDKAVDPTCKPSPCDCCP

?section =
3141517



(CH1-

AACTCGGGTGCCCTGAAGAG
PPELPGGPSVFIFPPKPKDT

LocusGe
Symons D.B. et



CH3)

CGGCGTGCACACCTTCCCGGC
LTISGTPEVTCVVVDVGH

nes & repe
al., Mol.





TGTCCTTCAGTCCTCCGGGCT
DDPEVKFSWFVDDVEVNT

rtoire = ge
Immunol., 26,





GTACTCTCTCAGCAGCATGGT
ATTKPREEQFNSTYRVVS

netable & s
841-850 (1989).





GACCGTGCCCGGCAGCACCT
ALRIQHQDWTGGKEFKC

pecies = bo
PMID: 2513487





CAGGACAGACCTTCACCTGC
KVHNEGLPARIVRTISRTK

vine & gro
Kacskovics I. and





AACGTAGCCCACCCGGCCAG
GPAREPQVYVLAPPQEEL

up = IGHC
Butler J.E., Mot





CAGCACCAAGGTGGACAAGG
SKSTVSLTCMVTSFYPDYI


immunol., 33,





CTGTTGATCCCACATGCAAAC
AVEWQRNGQPESEDKYG


189-195 (1996).





CATCACCCTGTGACTGTTGCC
TTPPQLDADSSYFLYSKLR


PMID: 8649440





CACCCCCTGAGCTCCCCGGAG
VDRNSWQEGDTYTCVVM


Rabbani H. et al.,





GACCCTCTGTCTTCATCTTCCC
HEALHNHYTQKSTSKSAG


Immunogenetics,





ACCGAAACCCAAGGACACCC
K (SEQ ID NO: 84)


46, 326-331





TCACAATCTCGGGAACGCCCG



(1997). PMID:





AGGTCACGTGTGTGGTGGTG



9218535





GACGTGGGCCACGATGACCC



Saini S.S. et al.,





CGAGGTGAAGTTCTCCTGGTT



Scand. J.





CGTGGACGACGTGGAGGTAA



Immunol. 65, 32-





ACACAGCCACGACGAAGCCG



8 (2007). PMID:





AGAGAGGAGCAGTTCAACAG



17212764





CACCTACCGCGTGGTCAGCGC









CCTGCGCATCCAGCACCAGGA









CTGGACTGGAGGAAAGGAGT









TCAAGTGCAAGGTCCACAAC









GAAGGCCTCCCGGCCCCCATC









GTGAGGACCATCTCCAGGACC









AAAGGGCCGGCCCGGGAGCC









GCAGGTGTATGTCCTGGCCCC









ACCCCAGGAAGAGCTCAGCA









AAAGCACGGTCAGCCTCACC









TGCATGGTCACCAGCTTCTAC









CCAGACTACATCGCCGTGGAG









TGGCAGAGAAACGGGCAGCC









TGAGTCGGAGGACAAGTACG









GCACGACCCCGCCCCAGCTG









GACGCCGACAGCTCCTACTTC









CTGTACAGCAAGCTCAGGGT









GGACAGGAACAGCTGGCAGG









AAGGAGACACCTACACGTGT









GTGGTGATGCACGAGGCCCTG









CACAATCACTACACGCAGAA









GTCCACCTCTAAGTCTGCGGG









TAAATGA (SEQ ID NO: 92)











IgG1
GCCTCCACCACAGCCCCGAA
ASTTAPKVYPLSSCCGDK
X16701






variant
AGTCTACCCTCTGAGTTCTTG
SSSTVTLGCLVSSYMPEPV
(M25278)






2
CTGCGGGGACAAGTCCAGCT
TVTWNSGALKSGVHTFPA








CCACCGTGACCCTGGGCTGCC
VLQSSGLYSLSSMVTVPG








TGGTCTCCAGCTACATGCCCG
STSGQTFTCNVAHPASSTK








AGCCGGTGACCGTGACCTGG
VDKAVDPTCKPSPCDCCP








AACTCGGGTGCCCTGAAGAG
PPELPGGPSVFIFPPKPKDT








CGGCGTGCACACCTTCCCGGC
LTISGTPEVTCVVVDVGH








CGTCCTTCAGTCCTCCGGGCT
DDPEVKFSWFVDDVEVNT








GTACTCTCTCAGCAGCATGGT
ATTKPREEQFNSTYRVVS








GACCGTGCCCGGCAGCACCT
ALRIQHQDWTGGKEFKC








CAGGACAGACCTTCACCTGC
KVHNEGLPAPIVRTISRTK








AACGTAGCCCACCCGGCCAG
GPAREPQVYVLAPPQEEL








CAGCACCAAGGTGGACAAGG
SKSTVSLTCMVTSFYPDYI








CTGTTGATCCCACATGCAAAC
AVEWQRNGQPESEDKYG








CATCACCCTGTGACTGTTGCC
TTPPQLDADSSYFLYSKLR








CACCCCCTGAGCTCCCCGGAG
VDRNSWQEGDTYTCVVM








GACCCTCTGTCTTCATCTTCCC
HEALHNHYTQKSTSKSAG








ACCGAAACCCAAGGACACCC
K* (SEQ ID NO: 85)








TCACAATCTCGGGAACGCCCG









AGGTCACGTGTGTGGTGGTG









GACGTGGGCCACGATGACCC









CGAGGTGAAGTTCTCCTGGTT









CGTGGACGACGTGGAGGTAA









ACACAGCCACGACGAAGCCG









AGAGAGGAGCAGTTCAACAG









CACCTACCGCGTGGTCAGCGC









CCTGCGCATCCAGCACCAGGA









CTGGACTGGAGGAAAGGAGT









TCAAGTGCAAGGTCCACAAC









GAAGGCCTCCCGGCCCCCATC









GTGAGGACCATCTCCAGGACC









AAAGGGCCGGCCCGGGAGCC









GCAGGTGTATGTCCTGGCCCC









ACCCCAGGAAGAGCTCAGCA









AAAGCACGGTCAGCCATCACC









TGCATGGTCACCAGCTTCTAC









CCAGACTACATCGCCGTGGAG









TGGCAGAGAAACGGGCAGCC









TGAGTCGGAGGACAAGTACG









GCACGACCCCGCCCCAGCTG









GACGCCGACAGCTCCTACTTC









CTGTACAGCAAGCTCAGGGT









GGACAGGAACAGCTGGCAGG









AAGGAGACACCTACACGTGT









GTGGTGATGCACGAGGCCCTG









CACAATCACTACACGCAGAA









GTCCACCTCTAAGTCTGCGGG









TAAATGA (SEQ ID NO: 93)











IgG1
GCCTCCACCACAGCCCCGAA
ASTTAPKVYPLSSCCGDK
S82409






variant
AGTCTACCCTCTGAGTTCTTG
SSSTVTLGCLVSSYMPEPV







3
CTGCGGGGACAAGTCCAGCT
TVTWNSGALKSGVHTFPA








CCACCGTGACCCTGGGCTGCC
VLQSSGLYSLSSMVTVPG








TGGTCTCCAGCTACATGCCCG
STSGTQTFTCNVAHPASST








AGCCGGTGACCGTGACCTGG
KVDKAVDPRCKTTCDCCP








AACTCGGGTGCCCTGAAGAG
PPELPGGPSVFIFPRKPKDT








CGGCGTGCACACCTTCCCGGC
LTISGTPEVTCVVVDVGH








CGTCCTTCAGTCCTCCGGGCT
DDPEVKFSWFVDDVEVNT








CTACTCTCTCAGCAGCATGGT
ATTKPREEQFNSTYRVVS








GACCGTGCCCGGCAGCACCT
ALRIQHQDWTGGKEFKC








CAGGAACCCAGACCTTCACCT
KVHNEGLPARIVRTISRTK








GCAACGTAGCCCACCCGGCC
GPAREPQVYVLAPPQEEL








AGCAGCACCAAGGTGGACAA
SKSTVSLTCMVTSFYPDYI








GGCTGTTGATCCCAGATGCAA
AVEWQRNGQPESEDKYG








AACAACCTGTGACTGTTGCCC
TIPPQLDADGSYFLYSRLR








ACCGCCTGAGCTCCCTGGAG
VDRNSWQEGDTYTCVVM








GACCCTGTCTTCATCTTCCC
HEALHNHYTQKSTSKSAG








ACCGAAACCCAAGGACACCC
K* (SEQ ID NO: 86)








TCACAATCTCGGGAACGCCCG









AGGTCACGTGTGTGGTGGTG









GACGTGGGCCACGATGACCC









CGAGGTGAAGTTCTCCTGGTT









CGTGGACGACGTGGAGGTAA









ACACAGCCACGACGAAGCCG









AGAGAGGAGCAGTTCAACAG









CACCTACCGCGTGGTCAGCGC









CCTGCGCATCCAGCACCAGGA









CTGGACTGGAGGAAAGGAGT









TCAAGTGCAAGGTCCACAAC









GAAGGCCTCCCAGCCCCCATC









GTGAGGACCATCTCCAGGACC









AAAGGGCCGGCCCGGGAGCC









GCAGGTGTATGTCCTGGCCCC









ACCCCAGGAAGAGCTCAGCA









AAAGCACGGTCAGCCTCACC









TGCATGGTCACCAGCTTCTAC









CCAGACTACATCGCCGTGGAG









TGGCAGAGAAATGGGCAGCC









TGAGTCAGAGGACAAGTACG









GCACGACCCCTCCCCAGCTGG









ACGCCGACGGCTCCTACTTCC









TGTACAGCAGGCTCAGGGTG









GACAGGAACAGCTGGCAGGA









AGGAGACACCTACACGTGTG









TGGTGATGCACGAGGCCCTGC









ACAATCACTACACGCAGAAGT









CCACCTCTAAGTCTGCGGGTA









AATGA (SEQ ID NO: 94)











IgG2
GCCTCCACCACAGCCCCGAA
ASTTAPKVYPLASSCGDTS
S82407






variant
AGTCTACCCTCTGGCATCCAG
SSTVTLGCLVSSYMPEPVT







1
CTGCGGAGACACATCCAGCTC
VTWNSGALKSGVHTFPAV








CACCGTGACCCTGGGCTGCCT
LQSSGLYSLSSMVTVPASS








GGTGTCCAGCTACATGCCCGA
SGQTFTCNVAHPASSTKV








GCCGGTGACCGTGACCTGGA
DKAVGVSIDCSKCHNQPC








ACTCGGGTGCCCTGAAGAGC
VREPSVFIFPPKPKDTLMI








GGCGTGCACACCTTCCCGGCT
TGTPEVTCVVVNVGHDN








GTCCTTCAGTCCTCCGGGCTC
PEVQFSWFVDDVEVHTAR








TACTCTCTCAGCAGCATGGTG
SKPREEQFNSTYRVVSALP








ACCGTGCCCGCCAGCAGCTC
IQHQDWTGGKEFKCKVN








AGGACAGACCTTCACCTGCA
NKGLSAPIVRIISRSKGPAR








ACGTAGCCCACCCGGCCAGC
EPQVYVLDPPKEELSKSTL








AGCACCAAGGTGGACAAGGC
SVTCMVTGFYPEDVAVEW








TGTTGGGGTCTCCATTGACTG
QRNRQTESEDKYRTTPPQ








CTCCAAGTGTCATAACCAGCC
LDTDRSYFLYSKLRVDRN








TTGCGTGAGGGAACCATCTGT
SWQEGDAYTCVVMHEAL








CTTCATCTTCCCACCGAAACC
HNHYMQKSTSKSAGK*








CAAAGACACCCTGATGATCAC
(SEQ ID NO: 87)








AGGAACGCCCGAGGTCACGT









GTGTGGTGGTGAACGTGGGC









CACGATAACCCCGAGGTGCA









GTTCTCCTGGTTCGTGGATGA









CGTGGAGGTGCACACGGCCA









GGTCGAAGCCAAGAGAGGAG









CAGTTCAACAGCACGTACCGC









GTGGTCAGCGCCCTGCCCATC









CAGCACCAGGACTGGACTGG









AGGAAAGGAGTTCAAGTGCA









AGGTCAACAACAAAGGCCTC









TCGGCCCCCATCGTGAGGATC









ATCTCCAGGAGCAAAGGGCC









GGCCCGGGAGCCGCAGGTGT









ATGTCCTGGACCCACCCAAGG









AAGAGCTCAGCAAAAGCACG









CTCAGCGTCACCTGCATGGTC









ACCGGCTTCTACCCAGAAGAT









GTAGCCGTGGAGTGGCAGAG









AAACCGGCAGACTGAGTCGG









AGGACAAGTACCGCACGACC









CCGCCCCAGCTGGACACCGA









CCGCTCCTACTTCCTGTACAG









CAAGCTCAGGGTGGACAGGA









ACAGCTGGCAGGAAGGAGAC









GCCTACACGTGTGTGGTGATG









CACGAGGCCCTGCACAATCAC









TACATGCAGAAGTCCACCTCT









AAGTCTGCGGGTAAATGA









(SEQ ID NO: 95)











IgG2
GCCTCCACCACAGCCCCGAA
ASTTAPKVYPLSSCCGDK
M36946






variant
AGTCTACCCTCTGAGTTCTTG
SSSTVTLGCLVSSYMPEPV
(X06703)






2
CTGCGGGGACAAGTCCAGCT
TVTWNSGALKSGVHTFPA








CCACCGTGACCCTGGGCTGCC
VLQSSGLYSLSSMVTVPG








TGGTGTCCAGCTACATGCCCG
STSGQTFTCNVAHPASSTK








AGCCGGTGACCGTGACCTGG
VDKAVGVSSDCSKPNNQ








AACTCGGGTGCCCTGAAGAG
HCVREPSVFIFPPKPKDTL








CGGCGTGCACACCTTCCCGGC
MITGTPEVTCVVVNVGHD








CGTCCTTCAGTCCTCCGGGCT
NPEVQFSWFVDDVEVHTA








CTACTCTCTCAGCAGCATGGT
RTKPREEQFNSTYRVVSA








GACCGTGCCCGGCAGCACCT
LPIQHQDWTGGKEFKCKV








CAGGACAGACCTTCACCTGC
NIKGLSASINRIIRSKGPA








AACGTAGCCCACCCGGCCAG
REPQVYVLDPPKEELSKS








CAGCACCAAGGTGGACAAGG
TVSVTCMVIGFYPEDVDV








CTGTTGGGGTCTCCAGTGACT
EWQRDRQTESEDKYRTTP








GCTCCAAGCCTAATAACCAGC
PQLDADRSYFLYSKLRVD








ATTGCGTGAGGGAACCATCTG
RNSWQRGDTYTCVVMHE








TCTTCATCTTCCCACCGAAAC
ALHNHYMQKSTSKSAGK








CCAAAGACACCCTGATGATCA
* (SEQ ID NO: 88)








CAGGAACGCCCGAGGTCACG









TGTGTGGTGGTGAACGTGGG









CCACGATAACCCCGAGGTGCA









GTTCTCCTGGTTCGTGGACGA









CGTGGAGGTGCACACGGCCA









GGACGAAGCCGAGAGAGGAG









CAGTTCAACAGCACGTACCGC









GTGGTCAGCGCCCTGCCCATC









CAGCACCAGGACTGGACTGG









AGGAAAGGAGTTCAAGTGCA









AGGTCAACATCAAAGGCCTCT









CGGCCTCCATCGTGAGGATCA









TCTCCAGGAGCAAAGGGCCG









GCCCGGGAGCCGCAGGTGTAT









GTCCTGGACCCACCCAAGGA









AGAGCTCAGCAAAAGCACGG









TCAGCGTCACCTGCATGGTCA









TCGGCTTCTACCCAGAAGATG









TAGACGTGGAGTGGCAGAGA









GACCGGCAGACTGAGTCGGA









GGACAAGTACCGCACGACCC









CGCCCCAGCTGGACGCCGAC









CGCTCCTACTTCCTGTACAGC 









AAGCTCAGGGTGGACAGGAA









CAGCTGGCAGAGAGGAGACA









CCTACACGTGTGTGGTGATGC









ACGAGGCCCTGCACAATCACT









ACATGCAGAAGTCCACCTCTA









AGTCTGCGGGTAAATGA (SEQ









ID NO: 96)











IgG2
GCCTCCACCACAGCCCCGAA
ASTTAPKVYPLSSCCGDK
X16702






variant
AGTCTACCCTCTGAGTTCTTG
SSSGVTLGCLVSSYMPEPV
(M25279)






3
CTGCGGGGACAAGTCCAGCT
TVTWNSGALKSGVHTFPA








CGGGGGTGACCCTGGGCTGC
VLQSSGLYSLSSMVTVPAS








CTGGTCTCCAGCTACATGCCC
SSGTQTFTCNVAHPASSTK








GAGCCGGTGACCGTGACCTG
VDKAVGVSSDCSKPNNQ








GAACTCGGGTGCCCTGAAGA
HCVREPSVFIFPPKPKDTL








GCGGCGTGCACACCTTCCCGG
MITGTPEVTCVVVNVGHD








CCGTCCTTCAGTCCTCCGGGC
NPEVQFSWFVDDVEVHTA








TCTACTCTCTCAGCAGCATGG
RTKPREEQFNSTYRVVSA








TGACCGTGCCCGCCAGCAGCT
LPIQHQDWTGGKEEKCKV








CAGGAACCCAGACCTTCACCT
NIKGLSASIVRIISRSKGPA








GCAACGTAGCCCACCCGGCC
REPQVYVLDPPKEELSKS








AGCAGCACCAAGGTGGACAA
TVSLTCMVIGFYPEDVDV








GGCTGTTGGGGTCTCCAGTGA
EWQRDRQTESEDKYRTTP








CTGCTCCAAGCCTAATAACCA
PQLDADRSYFLYSKLRVD








GCATTGCGTGAGGGAACCATC
RNSWQRGDTYTCVVMHE








TGTCTTCATCTTCCCACCGAA
ALHNHYMQKSTSKSAGK








ACCCAAAGACACCCTGATGAT
* (SEQ ID NO: 89)








CACAGGAACGCCCGAGGTCA









CGTGTGTGGTGGTGAACGTG









GGCCACGATAACCCCGAGGT









GCAGTTCTCCTGGTTCGTGGA









CGACGTGGAGGTGCACACGG









CCAGGACGAAGCCGAGAGAG









GAGCAGTTCAACAGCACGTA









CCGCGTGGTCAGCGCCCTGCC









CATCCAGCACCAGGACTGGA









CTGGAGGAAAGGAGTTCAAG









TGCAAGGTCAACATCAAAGG









CCTCTCGGCCTCCATCGTGAG









GATCATCTCCAGGAGCAAAGG









GCCGGCCCGGGAGCCGCAGG









TGTATGTCCTGGACCCACCCA









AGGAAGAGCTCAGCAAAAGC









ACGGTCAGCCTCACCTGCATG









GTCATCGGCTTCTACCCAGAA









GATGTAGACGTGGAGTGGCA









GAGAGACCGGCAGACTGAGT









CGGAGGACAAGTACCGCACG









ACCCCGCCCCAGCTGGACGC









CGACCGCTCCTACTTCCTGTA









CAGCAAGCTCAGGGTGGACA









GGAACAGCTGGCAGAGAGGA









GACACCTACACGTGTGTGGTG









ATGCACGAGGCCCTGCACAAT









CACTACATGCAGAAGTCCACC









TCTAAGTCTGCGGGTAAATGA









(SEQ ID NO: 97)











IgG3
GCCTCCACCACAGCCCCGAA
ASTTAPKVYPLASSCGDTS
U63638






variant
AGTCTACCCTCTGGCATCCAG
SSTVTLGCLVSSYMPEPVT







1
CTGCGGAGACACATCCAGCTC
VTWNSGALKSGVHTFPAV








CACCGTGACCCTGGGCTGCCT
RQSSGLYSLSSMVTVPASS








GGTCTCCAGCTACATGCCCGA
SETQTFTCNVAHPASSTKV








GCCGGTGACCCGTGACCTGGA
DKAVTARRPVPTTPKTTIP








ACTCGGGTGCCCTGAAGAGC
PGKPTTPKSEVEKTPCQCS








GGCGTGCACACCTTCCCGGCC
KCPEPLGGLSVFIFPPKPK








GTCCGGCAGTCCTCTGGGCTG
DILTISGTPEVTCVVVDV








TACTCTCTCAGCAGCATGGTG
GQDDPEVQFSWFVDDVE








ACTGTGCCCGCCAGCAGCTCA
VHTARTKPREEQFNSTYR








GAAACCCAGACCTTCACCTGC
VVSALRIQHQDWLQGKEF








AACGTAGCCCACCCGGCCAG
KCKVNNKGLPAPIVRTISR








CAGCACCAAGGTGGACAAGG
TKGQAREPQVYVLAPPRE








CTGTCACTGCAAGGCGTCCAG
ELSKSTLSLTCLITGFYPEE








TCCCGACGACGCCAAAGACA
IDVEWQRNGQPESEDKYH








ACTATCCCTCCTGGAAAACCC
TTAPQLDADGSYFLYSKL








ACAACCCCAAAGTCTGAAGT
RVNKSSWQEGDHYTCAV








TGAAAAGACACCCTGCCAGT
MHEALRNHYKEKSISRSP








GTTCCAAATGCCCAGAACCTC
GK* (SEQ ID NO: 90)








TGGGAGGACTGTCTGTCTTCA









TCTTCCCACCGAAACCCAAGG









ACACCCTCACAATCTCGGGAA









CGCCCGAGGTCACGTGTGTG









GTGGTGGACGTGGGCCAGGA









TGACCCCGAGGTGCAGTTCTC









CTGGTTCGTGGACGACGTGG









AGGTGCACACGGCCAGGACG









AAGCCGAGAGAGGAGCAGTT









CAACAGCACCTACCGCGTGGT









CAGCGCCCTGCGCATCCAGCA









CCAGGACTGGCTGCAGGGAA









AGGAGTTCAAGTGCAAGGTC









AACAACAAAGGCCTCCCGGC









CCCCATTGTGAGGACCATCTC









CAGGACCAAAGGGCAGGCCC









GGGAGCCGCAGGTGTATGTCC









TGGCCCCACCCCGGGAAGAG









CTCAGCAAAAGCACGCTCAG









CCTCACCTGCCTGATCACCGG









TTTCTACCCAGAAGAGATAGA









CGTGGAGTGGCAGAGAAATG









GGCAGCCTGAGTCGGAGGAC









AAGTACCACACGACCGCACC









CCAGCTGGAIGCTGACGGCTC









CTACTTCCTGTACAGCAAGCT









CAGGGTGAACAAGAGCAGCT









GGCAGGAAGGAGACCACTAC









ACGTGTGCAGTGATGCACGA









AGCTTTACGGAATCACTACAA









AGAGAAGTCCATCTCGAGGTC









TCCGGGTAAATGA (SEQ ID









NO: 98)











IgG3
GCCTCCACCACAGCCCCGAA
ASTTAPKVYPLASRCGDT
1163639






variant
AGTCTACCCTCTGGCATCCCG
SSSTVTLGCLVSSYMPEPV







2
CTGCGGAGACACATCCAGCTC
TVTWNSGALKSGVHTFPA








CACCGTGACCCTGGGCTGCCT
VLQSSGLYSLSSMVTVPAS








GGTCTCCAGCTACATGCCCGA
TSETQTFTCNVAHPASSTK








GCCGGTGACCGTGACCTGGA
VDKAVTARRPVPTTPKTTI








ACTCGGGTGCCCTGAAGAGT
PPGKPTTQESEVEKTPCQC








GGCGTGCACACCTTCCCGGCC
SKCPEPLGGLSVFIFPPKP








GTCCTTCAGTCCTCCGGGCTG
KDTLTISGTPEVTCVVVD








TACTCTCTCAGCAGCATGGTG
VGQDDPEVQFSWFVDDV








ACCGTGCCCGCCAGCACCTCA
EVHTARTKPREEQFNSTY








GAAACCCAGACCTTCACCTGC
RVVSALRIQHQDWLQGKE








AACGTAGCCCACCCGGCCAG
FKCKVNNKGLPAPIVRTIS








CAGCACCAAGGTGGACAAGG
RTKGQAREPQVYVLAPPR








CTGTCCTGCAAGGCGTCCAG
EELSKSTLSLTCLITGFYPE








TCCCGACGACGCCAAAGACA
EIDVEWQRNGQPESEDKY








ACCATCCCTCCTGGAAAACCC
HTFAPQLDADGSYFLYSR








ACAACCCAGGAGTCTGAAGT
LRVNKSSWQEGDHYTCA








TGAAAAGACACCCTGCCAGT
VMHEALRNHYKEKSISRS








GTTCCAAATGCCCAGAACCTC
PGK* (SEQ ID NO: 91)








TGGGAGGACTGTCTGTCTTCA









TCTTCCCACCGAAACCCAAGG









ACACCCTCACAATCTCGGGAA









CGCCCGAGGTCACGTGTGTG












GTGGTGGACGTGGGCCAGGA









TGACCCCGAGGTGCAGTTCTC









CTGGTTCGTGGACGACGTGG









AGGTGCACACGGCCAGGACG









AAGCCGAGAGAGGAGCAGTT









CAACAGCACCTACCGCGTGGT









CAGCGCCCTGCGCATCCAGCA









CCAGGACTGGCTGCAGGGAA









AGGAGTTCAAGTGCAAGGTC









AACAACAAAGGCCTCCCGGC









CCCCATTGTGAGGACCATCTC









CAGGACCAAAGGGCAGGCCC









GGGAGCCCGCAGGTGTATGTCC









TGGCCCCACCCCGGGAAGAG









CTCAGCAAAAGCACGCTCAG









CCTCACCTGCCTGATCACCGG









TTTCTACCCAGAAGAGATAGA









CGTGGAGTGGCAGAGAAATG









GGCAGCCTGAGTCGGAGGAC









AAGTACCACACGACCGCACC









CCAGCTGGATGCTGACGGCTC









CTACTTCCTGTACAGCAGGCT









CAGGGTGAACAAGAGCAGCT









GGCAGGAAGGAGACCACTAC









ACGTGTGCAGTGATGCATGAA









GCTTTACGGAATCACTACAAA









GAGAAGTCCATCTCGAGGTCT









CCGGGTAAATGA (SEQ ID NO:









99)










Bovine,
Ig
CAGCCCAAGTCCCCACCCTCG
QPKSPPSVTLFPPSTEELN
X62917
Not
Chen L. et al.,



Ig light
lambda
GTCACCCTGTTCCCGCCCTCC
GNKATLVCLISDFYPGSVT

registered
Vet. Immunol.



chain

ACGGAGGAGCTCAACGGCAA
VVWKADGSTITRNVETTR


Immunopathol,



constant

CAAGGCCACCCTGGTGTGTCT
ASKQSNSKYAASSYLSLTS


124, 284-294



region

CATCAGCGACTTCTACCCGGG
SDWKSKGSYSCEVTHEGS


(2008). PMID:



(CL)

TAGCGTGACCGTGGTCTGGAA
TVTKTVKPSECS* (SEQ ID


18538861





GGCAGACGGCAGCACCATCA
NO: 100)








CCCGCAACGTGGAGACCACC









CGGGCCTCCAAACAGAGCAA









CAGCAAGTACGCGGCCAGCA









GCTACCTGAGCCTGACGAGC









AGCGACTGGAAATCGAAAGG









CAGTTACAGCTGCGAGGTCAC









GCACGAGGGGAGCACCGTGA









CGAAGACAGTGAAGCCCTCA









GAGTGTTCTTAG (SEQ ID NO:









101)









In the anti-PD-1 antibody of the present disclosure, the VL and VH may be derived from rat. For example, the VL may be the VL of a rat anti-bovine PD-1 antibody, and the VH may be the VH of the rat anti-bovine PD-1 antibody.


The amino acid sequence of the VL and the amino acid sequence of the VH of the rat anti-bovine PD-1 antibody are shown in SEQ ID NOS: 1 and 2, respectively. The amino acid sequences as shown in SEQ ID NOS: 1 and 2 may have deletion(s), substitution(s) or addition(s) of one or several (e.g., up to five, about 10 at the most) amino acids. Even when such mutations are introduced, the resulting amino acid sequences may be capable of having the function as VL or VH of the PD-1 antibody.


The VL and VH of an antibody of an animal other than rat may be derived from an animal which produces a PD-1 that cross-reacts with rat anti-bovine PD-1 antibody 5D2.


There are two types of immunoglobulin light chain, which are called Kappa chain (κ) and Lambda chain (λ). In the anti-PD-1 antibody of the present disclosure, the light chain constant region (CL) of an antibody of an animal other than rat may have the amino acid sequence of the constant region of either Kappa chain or Lambda chain. However, the relative abundance of Lambda chain is higher in bovine, ovine, feline, canine and equine, and that of Kappa chain is higher in mouse, rat, human and porcine. Since a chain with a higher relative abundance is considered to be preferable, a bovine, ovine, feline, canine or equine antibody preferably has the amino acid sequence of the constant region of Lambda chain whereas a mouse, rat, human or porcine antibody preferably has the amino acid sequence of the constant region of Kappa chain.


The heavy chain constant region (CH) of an antibody of an animal other than rat may have the amino acid sequence of the constant region of an immunoglobulin equivalent to human IgG4. Immunoglobulin heavy chain is classified into γ chain, μ chain, α chain, δ chain and E chain depending on the difference in constant region. According to the type of heavy chain present, five classes (isotypes) of immunoglobulin are formed; they are IgG, IgM, IgA, IgD and IgE.


Immunoglobulin G (IgG) accounts for 70-75% of human immunoglobulins and is the most abundantly found monomeric antibody in plasma. IgG has a four-chain structure consisting of two light chains and two heavy chains. Human IgG1, IgG2 and IgG4 have a molecular weight of about 146,000, whereas human IgG3 has a long hinge region that connects Fab region and Fc region and has a larger molecular weight of 170,000. Human IgG1 accounts for about 65% of human IgG, human IgG2 about 25%, human IgG3 about 7%, and human IgG4 about 3%. They are uniformly distributed inside and outside of blood vessels. Having a strong affinity for Fc receptors and complement factors on effector cell surfaces, human IgG1 induces antibody-dependent cell cytotoxicity (ADCC) and also activates complements to induce complement-dependent cell cytotoxicity (CDC). Human IgG2 and IgG4 are low at ADCC and CDC activities because their affinity for Fc receptors and complement factors is low.


Immunoglobulin M (IgM), which accounts for about 10% of human immunoglobulins, is a pentameric antibody consisting of five basic four-chain structures joined together. It has a molecular weight of 970,000. Usually occurring only in blood, IgM is first produced against infectious microorganisms and takes charge of early stage immunity.


Immunoglobulin A (IgA) accounts for 10-15% of human immunoglobulins. It has a molecular weight of 160,000. Secreted IgA is a dimeric antibody consisting of two IgA molecules joined together. IgA1 is found in serum, nasal discharge, saliva and breast milk. In intestinal juice, IgA2 is found abundantly.


Immunoglobulin D (IgD) is a monomeric antibody accounting for no more than 1% of human immunoglobulins. IgD is found on B cell surfaces and involved in induction of antibody production.


Immunoglobulin E (IgE) is a monomeric antibody that occurs in an extremely small amount, accounting for only 0.001% or less of human immunoglobulins. Immunoglobulin E is considered to be involved in immune response to parasites but in advanced countries where parasites are rare, IgE is largely involved in bronchial asthma and allergy among other things.


In canine, sequences of IgG-A (equivalent to human IgG2), IgG-B (equivalent to human IgG1), IgG-C (equivalent to human IgG3) and IgG-D (equivalent to human IgG4) have been identified as the heavy chain of IgG. In the antibody of the present disclosure, an IgG's heavy chain constant region with neither ADCC activity nor CDC activity is preferable (IgG4 in human). In the case where the constant region of an immunoglobulin equivalent to human IgG4 has not been identified, one may use a constant region that has lost both ADCC activity and CDC activity as a result of introducing mutations into the relevant region of an immunoglobulin equivalent to human IgG4.


In bovine, sequences of IgG1, IgG2 and IgG3 have been identified as the heavy chain of IgG. In the antibody of the present disclosure, an IgG's heavy chain constant region with neither ADCC activity nor CDC activity is preferable (IgG4 in human). Although the constant region of wild-type human IgG1 has ADCC activity and CDC activity, it is known that these activities can be reduced by introducing amino acid substitutions or deletions into specific sites. In bovine, the constant region of an immunoglobulin equivalent to human IgG4 has not been identified, so mutations may be added to the relevant region of an immunoglobulin equivalent to human IgG1 and the resultant constant region then used. As one example, the amino acid sequence of the CH of a bovine antibody (IgG1 chain, GenBank: X62916) having mutations introduced into CH2 domain and a nucleotide sequence for such amino acid sequence (after codon optimization) are shown in SEQ ID NOS: 4 and 8, respectively.


An anti-PD-1 antibody is preferable in which (i) the CL of a bovine antibody has the amino acid sequence of the constant region of Lambda chain and (ii) the CH of the bovine antibody has mutations introduced thereinto that reduce ADCC activity and/or CDC activity.


The anti-PD-1 antibody of the present disclosure encompasses rat-bovine chimeric antibodies, bovinized antibodies and complete bovine-type antibodies. However, the animal is not limited to bovine and may be exemplified by human, canine, porcine, simian, mouse, feline, equine, goat, ovine, water buffalo, rabbit, hamster, guinea pig and the like.


For example, the anti-PD-1 antibody of the present disclosure may be an anti-PD-1 antibody in which the CL of a bovine antibody has the amino acid sequence as shown in SEQ ID NO: 151 and the CH of the bovine antibody has the amino acid sequence as shown in SEQ ID NO: 152.


The amino acid sequences as shown in SEQ ID NOS: 151 and 152 may have deletion(s), substitution(s) or addition(s) of one or several (e.g., up to five, about 10 at the most) amino acids. Even when such mutations are introduced, the resulting amino acid sequences may be capable of having the function as CL or CH of the PD-1 antibody.


The anti-PD-1 antibody of the present disclosure may have a four-chain structure comprising two light chains and two heavy chains.


The anti-PD-1 antibody of the present disclosure may be prepared as described below. Briefly, an artificial gene is synthesized which comprises (i) the identified variable region sequences of a rat anti-bovine PD-1 antibody and (ii) the constant region sequences of an antibody of an animal other than rat (e.g., bovine) (preferably, an immunoglobulin equivalent to human IgG1, in which mutations have been introduced into the relevant region to reduce ADCC activity and/or CDC activity). The resultant gene is inserted into a vector (e.g., plasmid), which is then introduced into a host cell (e.g., mammal cell such as CHO cell). The host cell is cultured, and the antibody of interest is collected from the resultant culture.


The amino acid sequence and the nucleotide sequence of the VL of the rat anti-bovine PD-1 antibody identified by the present inventors are shown in SEQ ID NOS: 149 and 153, respectively. Further, the nucleotide sequence after codon optimization is shown in SEQ ID NO: 159.


The amino acid sequence and the nucleotide sequence of the VH of the rat anti-bovine PD-1 antibody identified by the present inventors are shown in SEQ ID NOS: 150 and 154, respectively. Further, the nucleotide sequence after codon optimization is shown in SEQ ID NO: 160.


The amino acid sequence and the nucleotide sequence of the CL (Lambda chain, GenBank: X62917) of a bovine antibody are shown in SEQ ID NOS: 151 and 155, respectively. Further, the nucleotide sequence after codon optimization is shown in SEQ ID NO: 161.


The amino acid sequence and the nucleotide sequence (after codon optimization) of the CH (IgG1 chain, modified from GenBank: X62916) of a bovine antibody are shown in SEQ ID NOS: 152 and 156, respectively.


Further, SEQ ID NO: 157 shows the amino acid sequence of a chimeric light chain consisting of the VL of the rat anti-bovine PD-1 antibody and the CL (Lambda chain, GenBank: X62917) of the bovine antibody. The nucleotide sequence (after codon optimization) of the chimeric light chain consisting of the VL of the rat anti-PD-1 antibody and the CL (Lambda chain, GenBank: X62917) of the bovine antibody is shown in SEQ ID NO: 162.


SEQ ID NO: 158 shows the amino acid sequence of a chimeric heavy chain consisting of the VH of the rat anti-bovine PD-1 antibody and the CH (IgG1 chain, modified from GenBank: X62916) of the bovine antibody. The nucleotide sequence (after codon optimization) of the chimeric heavy chain consisting of the VH of the rat anti-bovine PD-1 antibody and the CH (IgG1 chain, modified from GenBank: X62916) of the bovine antibody is shown in SEQ ID NO: 163.


Amino acid sequences and nucleotide sequences of CLs and CHs of various animals other than rat may be obtained from known databases for use in the present disclosure.


Amino acid sequences and nucleotide sequences of bovine CL and CH are summarized in the table below.
















TABLE












GenBank









Accession
IMGT














Species
Ig Domain
Nucleotide Sequence
Amino Acid Sequence
No.
Database
Reference

















Bovine
Bovine
IgG1
GCCTCCACCACAGCCCCGAAAGTCTACCCTCTGAGTTCTTG
ASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYM
X62916
http://www.
Symons D.B.


(Scientific
Ig
variant
CTGCGGGGACAAGTCCAGCTCCACCGTGACCCTGGGCTGCC
PEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLS

imgt.org/
et al., J.


Name:
heavy
1
TGGTCTCCAGCTACATGCCCGAGCCGGTGACCGTGACCTGG
SMVTVPGSTSGQTFTCNVAHPASSTKVDKAVDP

IMGTreper-
Immunogenet.,



Bos

chain

AACTCGGGTGCCCTGAAGAGCGGCGTGCACACCTTCCCGG
TCKPSPCDCCPPPELPGGPSVFIFPPKPKDTLT

toire/
14, 273-



taurus)

con-

CTGTCCTTCAGTCCTCCGGGCTGTACTCTCTCAGCAGCATG
ISGTPEVTCVVVDVGHDDPEVKFSWFVDDVEVN

index.php?
283 (1987).



stant

GTGACCGTGCCCGGCAGCACCTCAGGACAGACCTTCACCTG
TATTKPREEQFNSTYRVVSALRIQHQDWTGGKE

section=
PMID:



region

CAACGTAGCCCACCCGGCCAGCAGCACCAAGGTGGACAAGG
FKCKVHNEGLPAPIVRTISRTKGPAREPQVYVL

Locus
3141517



(CH1

CTGTTGATCCCACATGCAAACCATCACCCTGTGACTGTTGC
APPQEELSKSTVSLTCMVTSFYPDYIAVEWQRN

Genes&
Symons D.B.



~CH3)

CCACCCCCTGAGCTCCCCGGAGGACCCTCTGTCTTCATCTT
GQPESEDKYGTTPPQLDADSSYFLYSKLRVDRN

repertoire=
et al., Mol.





CCCACCGAAACCCAAGGACACCCTCACAATCTCGGGAACGC
SWQEGDTYTCVVMHEALHNHYTQKSTSKSAGK

genetable&
Immunol., 26,





CCGAGGTCACGTGTGTGGTGGTGGACGTGGGCCACGATGAC
*

species=
841-850





CCCGAGGTGAAGTTCTCCTGGTTCGTGGACGACGTGGAGGT
(SEQ ID NO: 169)

bovine&
(1989). PMID:





AAACACAGCCACGACGAAGCCGAGAGAGGAGCAGTTCAAC


group=IGHC
2513487





AGCACCTACCGCGTGGTCAGCGCCCTGCGCATCCAGCACCA



Kacskovics I.





GGACTGGACTGGAGGAAAGGAGTTCAAGTGCAAGGTCCA



and Butler





CAACGAAGGCCTCCCGGCCCCCATCGTGAGGACCATCTCCA



J.E., Mol.





GGACCAAAGGGCCGGCCCGGGAGCCGCAGGTGTATGTCCT



Immunol., 33,





GGCCCCACCCCAGGAAGAGCTCAGCAAAAGCACGGTCAGC



189-195





CTCACCTGCATGGTCACCAGCTTCTACCCAGACTACATCGC



(1996). PMID:





CGTGGAGTGGCAGAGAAACGGGCAGCCTGAGTCGGAGGAC



8649440





AAGTACGGCACGACCCCGCCCCAGCTGGACGCCGACAGCT



Rabbani H.





CCTACTTCCTGTACAGCAAGCTCAGGGTGGACAGGAACAG



et al.,





CTGGCAGGAAGGAGACACCTACACGTGTGTGGTGATGCAC



Immuno-





GAGGCCCTGCACAATCACTACACGCAGAAGTCCACCTCTAA



genetics,





GTCTGCGGGTAAATGA



46, 326-





(SEQ ID NO: 177)



331 (1997).




IgG1
GCCTCCACCACAGCCCCGAAAGTCTACCCTCTGAGTTCTTG
ASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYM
X16701

PMID:




variant
CTGCGGGGACAAGTCCAGCTCCACCGTGACCCTGGGCTGCC
PEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLS
(M25278)

9218535




2
TGGTCTCCAGCTACATGCCCGAGCCGGTGACCGTGACCTGG
SMVTVPGSTSGQTFTCNVAHPASSTKVDKAVDP


Saini S.S. et





AACTCGGGTGCCCTGAAGAGCGGCGTGCACACCTTCCCGG
TCKPSPCDCCPPPELPGGPSVFIFPPKPKDTLT


al., Scand.





CCGTCCTTCAGTCCTCCGGGCTGTACTCTCTCAGCAGCATG
ISGTPEVTCVVVDVGHDDPEVKFSWFVDDVEVN


J.





GTGACCGTGCCCGGCAGCACCTCAGGACAGACCTTCACCTG
TATTKPREEQFNSTYRVVSALRIQHQDWTGGKE


Immunol. 65,





CAACGTAGCCCACCCGGCCAGCAGCACCAAGGTGGACAAG
FKCKVHNEGLPAPIVRTISRTKGPAREPQVYVL


32-8 (2007).





GCTGTTGATCCCACATGCAAACCATCACCCTGTGACTGTTG
APPQEELSKSTVSLTCMVTSFYPDYIAVEWQRN


PMID:





CCCACCCCCTGAGCTCCCCGGAGGACCCTCTGTCTTCATCT
QGPESEDKYGTTPPQLDADSSYFLYSKLRVDRN


17212764





TCCCACCGAAACCCAAGGACACCCTCACAATCTCGGGAACG
SWQEGDTYTCVVMHEALHNHYTQKSTSKSAGK








CCCGAGGTCACGTGTGTGGTGGTGGACGTGGGCCACGATGA
*








CCCCGAGGTGAAGTTCTCCTGGTTCGTGGACGACGTGGAG
(SEQ ID NO: 170)








GTAAACACAGCCACGACGAAGCCGAGAGAGGAGCAGTTCA









ACAGCACCTACCGCGTGGTCAGCGCCCTGCGCATCCAGCAC









CAGGACTGGACTGGAGGAAAGGAGTTCAAGTGCAAGGTC









CACAACGAAGGCCTCCCGGCCCCCATCGTGAGGACCATCTC









CAGGACCAAAGGGCCGGCCCGGGAGCCGCAGGTGTATGT









CCTGGCCCCACCCCAGGAAGAGCTCAGCAAAAGCACGGTC









AGCCTCACCTGCATGGTCACCAGCTTCTACCCAGACTACAT









CGCCGTGGAGTGGCAGAGAAACGGGCAGCCTGAGTCGGAG









GACAAGTACGGCACGACCCCGCCCCAGCTGGACGCCGACA









GCTCCTACTTCCTGTACAGCAAGCTCAGGGTGGACAGGAAC









AGCTGGCAGGAAGGAGACACCTACACGTGTGTGGTGATGC









ACGAGGCCCTGCACAATCACTACACGCAGAAGTCCACCTCT









AAGTCTGCGGGTAAATGA









(SEQ ID NO: 178)








IgG1
GCCTCCACCACAGCCCCGAAAGTCTACCCTCTGAGTTCTTG
ASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYM
S82409






variant
CTGCGGGGACAAGTCCAGCTCCACCGTGACCCTGGGCTGCC
PEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLS







3
TGGTCTCCAGCTACATGCCCGAGCCGGTGACCGTGACCTGG
SMVTVPGSTSGTQTFTCNVAHPASSTKVDKAVD








AACTCGGGTGCCCTGAAGAGCGGCGTGCACACCTTCCCGG
PRCKTTCDCCPPPELPGGPSVFIFPPKPKDTLT








CCGTCCTTCAGTCCTCCGGGCTCTACTCTCTCAGCAGCATG
ISGTPEVTCVVVDVGHDDPEVKFSWFVDDVEVN








GTGACCGTGCCCGGCAGCACCTCAGGAACCCAGACCTTCAC
TATTKPREEQFNSTYRVVSALRIQHQDWTGGKE








CTGCAACGTAGCCCACCCGGCCAGCAGCACCAAGGTGGACA
FKCKVHNEGLPAPIVRTISRTKGPAREPQVYVL








AGGCTGTTGATCCCAGATGCAAAACAACCTGTGACTGTTGC
APPQEELSKSTVSLTCMVTSFYPDYIAVEWQRN








CCACCGCCTGAGCTCCCTGGAGGACCCTCTGTCTTCATCTT
GQPESEDKYGTTPPQLDADGSYFLYSRLRVDRN








CCCACCGAAACCCAAGGACACCCTCACAATCTCGGGAACGC
SWQEGDTYTCVVMHEALHNHYTQKSTSKSAGK








CCGAGGTCACGTGTGTGGTGGTGGACGTGGGCCACGATGAC
*








CCCGAGGTGAAGTTCTCCTGGTTCGTGGACGACGTGGAGG
(SEQ ID NO: 171)








TAAACACAGCCACGACGAAGCCGAGAGAGGAGCAGTTCAA









CAGCACCTACCGCGTGGTCAGCGCCCTGCGCATCCAGCACC









AGGACTGGACTGGAGGAAAGGAGTTCAAGTGCAAGGTCC









ACAACGAAGGCCTCCCAGCCCCCATCGTGAGGACCATCTCC









AGGACCAAAGGGCCGGCCCGGGAGCCGCAGGTGTATGTC









CTGGCCCCACCCCAGGAAGAGCTCAGCAAAAGCACGGTCA









GCCTCACCTGCATGGTCACCAGCTTCTACCCAGACTACATC









GCCGTGGAGTGGCAGAGAAATGGGCAGCCTGAGTCAGAG









GACAAGTACGGCACGACCCCTCCCCAGCTGGACGCCGACG









GCTCCTACTTCCTGTACAGCAGGCTCAGGGTGGACAGGAA









CAGCTGGCAGGAAGGAGACACCTACACGTGTGTGGTGATG









CACGAGGCCCTGCACAATCACTACACGCAGAAGTCCACCTC









TAAGTCTGCGGGTAAATGA









(SEQ ID NO: 179)








IgG2
GCCTCCACCACAGCCCCGAAAGTCTACCCTCTGGCATCCAG
ASTTAPKVYPLASSCGDTSSSTVTLGCLVSSYM
S82407






variant
CTGCGGAGACACATCCAGCTCCACCGTGACCCTGGGCTGCC
PEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLS







1
TGGTGTCCAGCTACATGCCCGAGCCGGTGACCGTGACCTG
SMVTVPASSSGQTFTCNVAHPASSTKVDKAVGV








GAACTCGGGTGCCCTGAAGAGCGGCGTGCACACCTTCCCG
SIDCSKCHNQPCVREPSVFIFPPKPKDTLMITG








GCTGTCCTTCAGTCCTCCGGGCTCTACTCTCTCAGCAGCAT
TPEVTCVVVNVGHDNPEVQFSWFVDDVEVHTA








GGTGACCGTGCCCGCCAGCAGCTCAGGACAGACCTTCACCT
RSKPREEQFNSTYRVVSALPIQHQDWTGGKEFK








GCAACGTAGCCCACCCGGCCAGCAGCACCAAGGTGGACAAG
CKVNNKGLSAPIVRIISRSKGPAREPQVYVLDP








GCTGTTGGGGTCTCCATTGACTGCTCCAAGTGTCATAACCA
PKEELSKSTLSVTCMVTGFYPEDVAVEWQRNRQ








GCCTTGCGTGAGGGAACCATCTGTCTTCATCTTCCCACCGA
TESEDKYRTTPPQLDTDRSYFLYSKLRVDRNSW








AACCCAAAGACACCCTGATGATCACAGGAACGCCCGAGGT
QEGDAYTCVVMHEALHNHYMQKSTSKSAGK*








CACGTGTGTGGTGGTGAACGTGGGCCACGATAACCCCGAG
(SEQ ID NO: 24)








GTGCAGTTCTCCTGGTTCGTGGATGACGTGGAGGTGCACA









CGGCCAGGTCGAAGCCAAGAGAGGAGCAGTTCAACAGCA









CGTACCGCGTGGTCAGCGCCCTGCCCATCCAGCACCAGGAC









TGGACTGGAGGAAAGGAGTTCAAGTGCAAGGTCAACAACA









AAGGCCTCTCGGCCCCCATCGTGAGGATCATCTCCAGGAGC









AAAGGGCCGGCCCGGGAGCCGCAGGTGTATGTCCTGGACC









CACCCAAGGAAGAGCTCAGCAAAAGCACGCTCAGCGTCAC









CTGCATGGTCACCGGCTTCTACCCAGAAGATGTAGCCGTGG









AGTGGCAGAGAAACCGGCAGACTGAGTCGGAGGACAAGT









ACCGCACGACCCCGCCCCAGCTGGACACCGACCGCTCCTAC









TTCCTGTACAGCAAGCTCAGGGTGGACAGGAACAGCTGGC









AGGAAGGAGACGCCTACACGTGTGTGGTGATGCACGAGG









CCCTGCACAATCACTACATGCAGAAGTCCACCTCTAAGTCT









GCGGGTAAATGA









(SEQ ID NO: 32)








IgG2
GCCTCCACCACAGCCCCGAAAGTCTACCCTCTGAGTTCTTG
ASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYM
M36946






variant
CTGCGGGGACAAGTCCAGCTCCACCGTGACCCTGGGCTGCC
PEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLS
(X06703)






2
TGGTGTCCAGCTACATGCCCGAGCCGGTGACCGTGACCTG
SMVTVPGSTSGQTFTCNVAHPASSTKVDKAVGV








GAACTCGGGTGCCCTGAAGAGCGGCGTGCACACCTTCCCG
SSDCSKPNNQHCVREPSVFIFPPKPKDTLMITG








GCCGTCCTTCAGTCCTCCGGGCTCTACTCTCTCAGCAGCAT
TPEVTCVVVNVGHDNPEVQFSWFVDDVEVHTA








GGTGACCGTGCCCGGCAGCACCTCAGGACAGACCTTCACCT
RTKPREEQFNSTYRVVSALPIQHQDWTGGKEFK








GCAACGTAGCCCACCCGGCCAGCAGCACCAAGGTGGACAAG
CKVNIKGLSASIVRIISRSKGPAREPQVYVLDP








GCTGTTGGGGTCTCCAGTGACTGCTCCAAGCCTAATAACCA
PKEELSKSTVSVTCMVIGFYPEDVDVEWQRDRQ








GCATTGCGTGAGGGAACCATCTGTCTTCATCTTCCCACCGA
TESEDKYRTTPPQLDADRSYFLYSKLRVDRNSW








AACCCAAAGACACCCTGATGATCACAGGAACGCCCGAGGT
QRGDTYTCVVMHEALHNHYMQKSTSKSAGK*








CACGTGTGTGGTGGTGAACGTGGGCCACGATAACCCCGAG
(SEQ ID NO: 173)








GTGCAGTTCTCCTGGTTCGTGGACGACGTGGAGGTGCACA









CGGCCAGGACGAAGCCGAGAGAGGAGCAGTTCAACAGCA









CGTACCGCGTGGTCAGCGCCCTGCCCATCCAGCACCAGGAC









TGGACTGGAGGAAAGGAGTTCAAGTGCAAGGTCAACATCA









AAGGCCTCTCGGCCTCCATCGTGAGGATCATCTCCAGGAGC









AAAGGGCCGGCCCGGGAGCCGCAGGTGTATGTCCTGGACC









CACCCAAGGAAGAGCTCAGCAAAAGCACGGTCAGCGTCAC









CTGCATGGTCATCGGCTTCTACCCAGAAGATGTAGACGTGG









AGTGGCAGAGAGACCGGCAGACTGAGTCGGAGGACAAGT









ACCGCACGACCCCGCCCCAGCTGGACGCCGACCGCTCCTAC









TTCCTGTACAGCAAGCTCAGGGTGGACAGGAACAGCTGGC









AGAGAGGAGACACCTACACGTGTGTGGTGATGCACGAGGC









CCTGCACAATCACTACATGCAGAAGTCCACCTCTAAGTCTG









CGGGTAAATGA









(SEQ ID NO: 181)








IgG2
GCCTCCACCACAGCCCCGAAAGTCTACCCTCTGAGTTCTTG
ASTTAPKVYPLSSCCGDKSSSGVTLGCLVSSYM
X16702






variant
CTGCGGGGACAAGTCCAGCTCGGGGGTGACCCTGGGCTGCC
PEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLS
(M25279)






3
TGGTCTCCAGCTACATGCCCGAGCCGGTGACCGTGACCTGG
SMVTVPASSSGTQTFTCNVAHPASSTKVDKAVG








AACTCGGGTGCCCTGAAGAGCGGCGTGCACACCTTCCCGG
VSSDCSKPNNQHCVREPSVFIFPPKPKDTLMIT








CCGTCCTTCAGTCCTCCGGGCTCTACTCTCTCAGCAGCATG
GTPEVTCVVVNVGHDNPEVQFSWFVDDVEVHT








GTGACCGTGCCCGCCAGCAGCTCAGGAACCCAGACCTTCAC
ARTKPREEQFNSTYRVVSALPIQHQDWTGGKEF








CTGCAACGTAGCCCACCCGGCCAGCAGCACCAAGGTGGACA
KCKVNIKGLSASIVRIISRSKGPAREPQVYVLD








AGGCTGTTGGGGTCTCCAGTGACTGCTCCAAGCCTAATAAC
PPKEELSKSTVSLTCMVIGFYPEDVDVEWQRDR








CAGCATTGCGTGAGGGAACCATCTGTCTTCATCTTCCCACC
QTESEDKYRTTPPQLDADRSYFLYSKLRVDRNS








GAAACCCAAAGACACCCTGATGATCACAGGAACGCCCGAG
WQRGDTYTCVVMHEALHNHYMQKSTSKSAGK*








GTCACGTGTGTGGTGGTGAACGTGGGCCACGATAACCCCG
(SEQ ID NO: 26)








AGGTGCAGTTCTCCTGGTTCGTGGACGACGTGGAGGTGCA









CACGGCCAGGACGAAGCCGAGAGAGGAGCAGTTCAACAG









CACGTACCGCGTGGTCAGCGCCCTGCCCATCCAGCACCAGG









ACTGGACTGGAGGAAAGGAGTTCAAGTGCAAGGTCAACAT









CAAAGGCCTCTCGGCCTCCATCGTGAGGATCATCTCCAGGA









GCAAAGGGCCGGCCCGGGAGCCGCAGGTGTATGTCCTGG









ACCCACCCAAGGAAGAGCTCAGCAAAAGCACGGTCAGCCT









CACCTGCATGGTCATCGGCTTCTACCCAGAAGATGTAGACG









TGGAGTGGCAGAGAGACCGGCAGACTGAGTCGGAGGACA









AGTACCGCACGACCCCGCCCCAGCTGGACGCCGACCGCTCC









TACTTCCTGTACAGCAAGCTCAGGGTGGACAGGAACAGCT









GGCAGAGAGGAGACACCTACACGTGTGTGGTGATGCACGA









GGCCCTGCACAATCACTACATGCAGAAGTCCACCTCTAAGT









CTGCGGGTAAATGA









(SEQ ID NO: 34)








IgG3
GCCTCCACCACAGCCCCGAAAGTCTACCCTCTGGCATCCAG
ASTTAPKVYPLASSCGDTSSSTVTLGCLVSSYM
U63638






variant
CTGCGGAGACACATCCAGCTCCACCGTGACCCTGGGCTGCC
PEPVTVTWNSGALKSGVHTFPAVRQSSGLYSLS







1
TGGTCTCCAGCTACATGCCCGAGCCGGTGACCGTGACCTGG
SMVTVPASSSETQTFTCNVAHPASSTKVDKAVT








AACTCGGGTGCCCTGAAGAGCGGCGTGCACACCTTCCCGG
ARRPVPTTPKTTIPPGKPTTPKSEVEKTPCQCS








CCGTCCGGCAGTCCTCTGGGCTGTACTCTCTCAGCAGCATG
KCPEPLGGLSVFIFPPKPKDTLTISGTPEVTCV








GTGACTGTGCCCGCCAGCAGCTCAGAAACCCAGACCTTCAC
VVDVGQDDPEVQFSWFVDDVEVHTARTKPREEQ








CTGCAACGTAGCCCACCCGGCCAGCAGCACCAAGGTGGAC
FNSTYRVVSALRIQHQDWLQGKEFKCKVNNKGL








AAGGCTGTCACTGCAAGGCGTCCAGTCCCGACGACGCCAA
PAPIVRTISRTKGQAREPQVYVLAPPREELSKS








AGACAACTATCCCTCCTGGAAAACCCACAACCCCAAAGTCT
TLSLTCLITGFYPEEIDVEWQRNGQPESEDKYH








GAAGTTGAAAAGACACCCTGCCAGTGTTCCAAATGCCCAG
TTAPQLDADGSYFLYSKLRVNKSSWQEGDHYTC








AACCTCTGGGAGGACTGTCTGTCTTCATCTTCCCACCGAAA
AVMHEALRNHYKEKSISRSPGK*








CCCAAGGACACCCTCACAATCTCGGGAACGCCCGAGGTCA
(SEQ ID NO: 175)








CGTGTGTGGTGGTGGACGTGGGCCAGGATGACCCCGAGGT









GCAGTTCTCCTGGTTCGTGGACGACGTGGAGGTGCACACG









GCCAGGACGAAGCCGAGAGAGGAGCAGTTCAACAGCACC









TACCGCGTGGTCAGCGCCCTGCGCATCCAGCACCAGGACT









GGCTGCAGGGAAAGGAGTTCAAGTGCAAGGTCAACAACAA









AGGCCTCCCGGCCCCCATTGTGAGGACCATCTCCAGGACCA









AAGGGCAGGCCCGGGAGCCGCAGGTGTATGTCCTGGCCCC









ACCCCGGGAAGAGCTCAGCAAAAGCACGCTCAGCCTCACC









TGCCTGATCACCGGTTTCTACCCAGAAGAGATAGACGTGGA









GTGGCAGAGAAATGGGCAGCCTGAGTCGGAGGACAAGTA









CCACACGACCGCACCCCAGCTGGATGCTGACGGCTCCTACT









TCCTGTACAGCAAGCTCAGGGTGAACAAGAGCAGCTGGCA









GGAAGGAGACCACTACACGTGTGCAGTGATGCACGAAGCT









TTACGGAATCACTACAAAGAGAAGTCCATCTCGAGGTCTCC









GGGTAAATGA









(SEQ ID NO: 183)








IgG3
GCCTCCACCACAGCCCCGAAAGTCTACCCTCTGGCATCCCG
ASTTAPKVYPLASRCGDTSSSTVTLGCLVSSYM
U63639






variant
CTGCGGAGACACATCCAGCTCCACCGTGACCCTGGGCTGCC
PEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLS







2
TGGTCTCCAGCTACATGCCCGAGCCGGTGACCGTGACCTGG
SMVTVPASTSETQTFTCNVAHPASSTKVDKAVT








AACTCGGGTGCCCTGAAGAGTGGCGTGCACACCTTCCCGG
ARRPVPTTPKTTIPPGKPTTQESEVEKTPCQCS








CCGTCCTTCAGTCCTCCGGGCTGTACTCTCTCAGCAGCATG
KCPEPLGGLSVFIFPPKPKDTLTISGTPEVTCV








GTGACCGTGCCCGCCAGCACCTCAGAAACCCAGACCTTCAC
VVDVGQDDPEVQFSWFVDDVEVHTARTKPREEQ








CTGCAACGTAGCCCACCCGGCCAGCAGCACCAAGGTGGAC
FNSTYRVVSALRIQHQDWLQGKEFKCKVNNKGL








AAGGCTGTCACTGCAAGGCGTCCAGTCCCGACGACGCCAA
PAPIVRTISRTKGQAREPQVYVLAPPREELSKS








AGACAACCATCCCTCCTGGAAAACCCACAACCCAGGAGTCT
TLSLTCLITGFYPEEIDVEWQRNGQPESEDKYH








GAAGTTGAAAAGACACCCTGCCAGTGTTCCAAATGCCCAG
TTAPQLDADGSYFLYSRLRVNKSSWQEGDHYTC








AACCTCTGGGAGGACTGTCTGTCTTCATCTTCCCACCGAAA
AVMHEALRNHYKEKSISRSPGK*








CCCAAGGACACCCTCACAATCTCGGGAACGCCCGAGGTCA
(SEQ ID NO: 176)








CGTGTGTGGTGGTGGACGTGGGCCAGGATGACCCCGAGGT









GCAGTTCTCCTGGTTCGTGGACGACGTGGAGGTGCACACG









GCCAGGACGAAGCCGAGAGAGGAGCAGTTCAACAGCACC









TACCGCGTGGTCAGCGCCCTGCGCATCCAGCACCAGGACT









GGCTGCAGGGAAAGGAGTTCAAGTGCAAGGTCAACAACAA









AGGCCTCCCGGCCCCCATTGTGAGGACCATCTCCAGGACCA









AAGGGCAGGCCCGGGAGCCGCAGGTGTATGTCCTGGCCCC









ACCCCGGGAAGAGCTCAGCAAAAGCACGCTCAGCCTCACC









TGCCTGATCACCGGTTTCTACCCAGAAGAGATAGACGTGGA









GTGGCAGAGAAATGGGCAGCCTGAGTCGGAGGACAAGTA









CCACACGACCGCACCCCAGCTGGATGCTGACGGCTCCTACT









TCCTGTACAGCAGGCTCAGGGTGAACAAGAGCAGCTGGCA









GGAAGGAGACCACTACACGTGTGCAGTGATGCATGAAGCT









TTACGGAATCACTACAAAGAGAAGTCCATCTCGAGGTCTCC









GGGTAAATGA









(SEQ ID NO: 184)







Bovine
Ig
CAGCCCAAGTCCCCACCCTCGGTCACCCTGTTCCCGCCCTC
QPKSPPSVTLFPPSTEELNGNKATLVCLISDFY
X62917
Not
Chen L. et



Ig
lambda
CACGGAGGAGCTCAACGGCAACAAGGCCACCCTGGTGTGTC
PGSVTVVWKADGSTITRNVETTRASKQSNSKYA

registered
al., Vet.



light

TCATCAGCGACTTCTACCCGGGTAGCGTGACCGTGGTCTGG
ASSYLSLTSSDWKSKGSYSCEVTHEGSTVTKTV


Immunol.



chain

AAGGCAGACGGCAGCACCATCACCCGCAACGTGGAGACCA
KPSECS*


Immuno-



con-

CCCGGGCCTCCAAACAGAGCAACAGCAAGTACGCGGCCAG
(SEQ ID NO: 151)


pathol.,



stant

CAGCTACCTGAGCCTGACGAGCAGCGACTGGAAATCGAAA



124, 284-294 



region

GGCAGTTACAGCTGCGAGGTCACGCACGAGGGGAGCACC



(2008). PMID:



(CL)

GTGACGAAGACAGTGAAGCCCTCAGAGTGTTCTTAG



18538861





(SEQ ID NO: 155)



+A2:H11










Amino acid sequences and nucleotide sequences of ovine, water buffalo and human CL and CH are summarized in the table below.
















TABLE












GenBank



















Accession
IMGT



Species
Ig Domain
Nucleotide Sequence
Amino Acid Sequence
No.
Database
Reference

















Human
Human
IgG4
GAGTCCAAATATGGTCCCCCATGCCCATCATGC
ESKYGPPCPSCPAPEFLGGPSVFLFPPKPKD
K01316
http://www.
Ellison J.


(Scientific
Ig
variant
CCAGCACCTGAGTTCCTGGGGGGACCATCAGT
TLMISRTPEVTCVVVDVSQEDPEVQFNWY

imgt.org/
et al.,


Name:
heavy
1
CTTCCTGTTCCCCCCAAAACCCAAGGACACTCT
VDGVEVHNAKTKPREEQFNSTYRVVSVLT

IMGTrepertoire/
DNA, 1,



Homo

chain

CATGATCTCCCGGACCCCTGAGGTCACGTGCG
VLHQDWLNGKEYKCKVSNKGLPSSIEKTIS

index.php?
11-18



sapiens)

con-

TGGTGGTGGACGTGAGCCAGGAAGACCCCGA
KAKGQPREPQVYTLPPSQEEMTKNQVSLT

section=
(1981). PMID:



stant

GGTCCAGTTCAACTGGTACGTGGATGGCGTGG
CLVKGFYPSDIAVEWESNGQPENNYKTTP

LocusGenes&
6299662



region

AGGTGCATAATGCCAAGACAAAGCCGCGGGA
PVLDSDGSFFLYSRLTVDKSRWQEGNVFS

repertoire=
Brusco A. et



(CH1

GGAGCAGTTCAACAGCACGTACCGTGTGGTCA
CSVMHEALHNHYTQKSLSLSLGK*

genetable&
al., Eur. J.



~CH3)

GCGTCCTCACCGTCCTGCACCAGGACTGGCTG
(SEQ ID NO: 201)

species=
Immunogenet.,





AACGGCAAGGAGTACAAGTGCAAGGTCTCCA


human&group=
25, 349-355 





ACAAAGGCCTCCCGTCCTCCATCGAGAAAACC


IGHC
(1998). PMID:





ATCTCCAAAGCCAAAGGGCAGCCCCGAGAGCC



9805657





ACAGGTGTACACCCTGCCCCCATCCCAGGAGG









AGATGACCAAGAACCAGGTCAGCCTGACCTGC









CTGGTCAAAGGCTTCTACCCCAGCGACATCGC









CGTGGAGTGGGAGAGCAATGGGCAGCCGGA









GAACAACTACAAGACCACGCCTCCCGTGCTGG









ACTCCGACGGCTCCTTCTTCCTCTACAGCAGGC









TAACCGTGGACAAGAGCAGGTGGCAGGAGGG









GAATGTCTTCTCATGCTCCGTGATGCATGAGG









CTCTGCACAACCACTACACACAGAAGAGCCTCT









CCCTGTCTCTGGGTAAATGA









(SEQ ID NO: 202)








IgG4
GAGTCCAAATATGGTCCCCCGTGCCCATCATG
ESKYGPPCPSCPAPEFLGGPSVFLFPPKPKD
AJ001563






variant
CCCAGCACCTGAGTTCCTGGGGGGACCATCAG
TLMISRTPEVTCVVVDVSQEDPEVQFNWY







2
TCTTCCTGTTCCCCCCAAAACCCAAGGACACTC
VDGVEVHNAKTKPREEQFNSTYRVVSVLT








TCATGATCTCCCGGACCCCTGAGGTCACGTGC
VVHQDWLNGKEYKCKVSNKGLPSSIEKTIS








GTGGTGGTGGACGTGAGCCAGGAAGACCCCG
KAKGQPREPQVYTLPPSQEEMTKNQVSLT








AGGTCCAGTTCAACTGGTACGTGGATGGCGTG
CLVKGFYPSDIAVEWESNGQPENNYKTTP








GAGGTGCATAATGCCAAGACAAAGCCGCGGG
PVLDSDGSFFLYSRLTVDKSRWQEGNVFS








AGGAGCAGTTCAACAGCACGTACCGTGTGGTC
CSVMHEALHNHYTQKSLSLSLGK*








AGCGTCCTCACCGTCGTGCACCAGGACTGGCT
(SEQ ID NO: 203)








GAACGGCAAGGAGTACAAGTGCAAGGTCTCC









AACAAAGGCCTCCCGTCCTCCATCGAGAAAAC









CATCTCCAAAGCCAAAGGGCAGCCCCGAGAGC









CACAGGTGTACACCCTGCCCCCATCCCAGGAG









GAGATGACCAAGAACCAGGTCAGCCTGACCTG









CCTGGTCAAAGGCTTCTACCCCAGCGACATCG









CCGTGGAGTGGGAGAGCAATGGGCAGCCGGA









GAACAACTACAAGACCACGCCTCCCGTGCTGG









ACTCCGACGGCTCCTTCTTCCTCTACAGCAGGC









TAACCGTGGACAAGAGCAGGTGGCAGGAGGG









GAATGTCTTCTCATGCTCCGTGATGCATGAGG









CTCTGCACAACCACTACACGCAGAAGAGCCTC









TCCCTGTCTCTGGGTAAATGA









(SEQ ID NO: 204)








IgG4
GCACCTGAGTTCCTGGGGGGACCATCAGTCTT
APEFLGGPSVFLFPPKPKDTLMISRTPEVTC
AJ001564






variant
CCTGTTCCCCCCAAAACCCAAGGACACTCTCAT
VVVDVSQEDPEVQFNWYVDGVEVHNAK







3
GATCTCCCGGACCCCTGAGGTCACGTGCGTGG
TKPREEQFNSTYRVVSVLTVLHQDWLNGK








TGGTGGACGTGAGCCAGGAAGACCCCGAGGT
EYKCKVSNKGLPSSIEKTISKAKGQPREPQV








CCAGTTCAACTGGTACGTGGATGGCGTGGAG
YTLPPSQEEMTKNQVSLTCLVKGFYPSDIA








GTGCATAATGCCAAGACAAAGCCGCGGGAGG
VEWESNGQPENNYKTTPPVLDSDGSFFLY








AGCAGTTCAACAGCACGTACCGTGTGGTCAGC
SKLTVDKSRWQEGNVFSCSVMHEALHNH








GTCCTCACCGTCCTGCACCAGGACTGGCTGAA
YTQKSLSLSLGK*








CGGCAAGGAGTACAAGTGCAAGGTCTCCAACA
(SEQ ID NO: 205)








AAGGCCTCCCGTCCTCCATCGAGAAAACCATCT









CCAAAGCCAAAGGGCAGCCCCGAGAGCCACA









GGTGTACACCCTGCCCCCATCCCAGGAGGAGA









TGACCAAGAACCAGGTCAGCCTGACCTGCCTG









GTCAAAGGCTTCTACCCCAGCGACATCGCCGT









GGAGTGGGAGAGCAATGGGCAGCCGGAGAA









CAACTACAAGACCACGCCTCCCGTGCTGGACT









CCGACGGCTCCTTCTTCCTCTACAGCAAGCTCA









CCGTGGACAAGAGCAGGTGGCAGGAGGGGA









ACGTCTTCTCATGCTCCGTGATGCATGAGGCTC









TGCACAACCACTACACGCAGAAGAGCCTCTCC









CTGTCTCTGGGTAAATGA









(SEQ ID NO: 206)







Human
Ig
ACTGTGGCTGCACCATCTGTCTTCATCTTCCCG
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNF
X96754
http://www.
None



Ig
kappa
CCATCTGATGAGCAGTTGAAATCTGGAACTGC
YPREAKVQWKVDNALQSGNSQESVTEQD

imgt.org/




light
(CK)
CTCTGTTGTGTGCCTGCTGAATAACTTCTATCC
SKDSTYSLSSTLTLSKADYEKHKVYACEVTH

IMGTrepartoire/




chain

CAGAGAGGCCAAAGTACAGTGGAAGGTGGAT
QGLSSPVTKSFNRGEC*

index.php?




con-

AACGCCCTCCAATCGGGTAACTCCCAGGAGAG
(SEQ ID NO: 207)

section=




stant

TGTCACAGAGCAGGACAGCAAGGACAGCACC


LocusGenes&




region

TACAGCCTCAGCAGCACCCTGACGCTGAGCAA


repertoire=






AGCAGACTACGAGAAACACAAAGTCTACGCCT


genetable&






GCGAAGTCACCCATCAGGGCCTGAGCTCGCCC


species=






GTCACAAAGAGCTTCAACAGGGGAGAGTGTTA


human&group=






G


IGKC






(SEQ ID NO: 208)









The amino acid sequences as shown in SEQ ID NOS: 4, 3, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, 62, 64, 66, 68, 70, 72, 74, 76, 78, 12, 80, 82, 84-91, 100, 102, 11, 151, 169-76, 185, 187, 189, 191, 193, 196, 197, 199, 201, 203, 205 and 207 may have deletion(s), substitution(s) or addition(s) of one or several (e.g., up to five, about 10 at the most) amino acids. Even when such mutations are introduced, the resulting amino acid sequences may be capable of having the function as a constant region of Ig heavy chain or light chain.


Although the constant region of wild-type human IgG1 has ADCC activity and CDC activity, it is known that these activities can be reduced by introducing amino acid substitutions and deletions into specific sites. In the case of animals other than human where the constant region of an immunoglobulin equivalent to human IgG4 has not been identified, mutations may be introduced into the relevant region of an immunoglobulin equivalent to human IgG1 so that the resultant constant region with reduced ADCC activity and CDC activity can be used.


Certain embodiments of the present disclosure provides an artificial genetic DNA comprising (a′) a DNA encoding a light chain comprising a light chain variable region containing CDR1 having the amino acid sequence of QSLEYSDGYTY (SEQ ID NO: 164), CDR2 having the amino acid sequence of GVS and CDR3 having the amino acid sequence of FQATHDPDT (SEQ ID NO: 165) and the light chain constant region of an antibody of an animal other than rat and (b′) a DNA encoding a heavy chain comprising a heavy chain variable region containing CDR1 having the amino acid sequence of GFSLTSYY (SEQ ID NO: 166), CDR2 having the amino acid sequence of IRSGGST (SEQ ID NO: 167) and CDR3 having the amino acid sequence of ARTSSGYEGGFDY (SEQ ID NO: 168) and the heavy chain constant region of an antibody of an animal other than rat. The present disclosure also provides a DNA encoding a light chain comprising a light chain variable region containing CDR1 having the amino acid sequence of QSLEYSDGYTY (SEQ ID NO: 164), CDR2 having the amino acid sequence of GVS and CDR3 having the amino acid sequence of FQATHDPDT (SEQ ID NO: 165) and the light chain constant region of an antibody of an animal other than rat. Further, the present disclosure also provides a DNA encoding a heavy chain comprising a heavy chain variable region containing CDR1 having the amino acid sequence of GFSLTSYY (SEQ ID NO: 166), CDR2 having the amino acid sequence of IRSGGST (SEQ ID NO: 167) and CDR3 having the amino acid sequence of ARTSSGYEGGFDY (SEQ ID NO: 168) and the heavy chain constant region of an antibody of an animal other than rat.


For (a) a light chain comprising a light chain variable region containing CDR1 having the amino acid sequence of QSLEYSDGYTY (SEQ ID NO: 164), CDR2 having the amino acid sequence of GVS and CDR3 having the amino acid sequence of FQATHDPDT (SEQ ID NO: 165) and the light chain constant region of an antibody of an animal other than rat; and (b) a heavy chain comprising a heavy chain variable region containing CDR1 having the amino acid sequence of GFSLTSYY (SEQ ID NO: 166), CDR2 having the amino acid sequence of IRSGGST (SEQ ID NO: 167) and CDR3 having the amino acid sequence of ARTSSGYEGGFDY (SEQ ID NO: 168) and the heavy chain constant region of an antibody of an animal other than rat, reference should be had to the foregoing description. The DNA of (a′) is a DNA (gene) encoding the light chain of (a); and the DNA of (b′) is a DNA (gene) encoding the heavy chain of (b). An artificial genetic DNA comprising the DNA of (a′) and the DNA of (′b) may be synthesized on commercial synthesizer. Restriction enzyme recognition sites, KOZAK sequences, poly-A addition signal sequences, promoter sequences, intron sequences or the like may be added to the artificial genetic DNA.


Certain embodiments of the present disclosure also provides a vector comprising the above-mentioned artificial genetic DNA.


As the vector, Escherichia coli-derived plasmids (e.g., pBR322, pBR325, pUC12 or pUC13); Bacillus subtilis-derived plasmids (e.g., pUB110, pTP5 or pC194), yeast-derived plasmids (e.g., pSH19 or pSH15); bacteriophages such as λ phage; animal viruses such as retrovirus or vaccinia virus; or insect pathogen viruses such as baculovirus may be used. In the Examples described later, pDN112 (Marzi A, Yoshida R, Miyamoto H, Ishijima M, Suzuki Y, Higuchi M, Matsuyama Y, Igarashi M, Nakayama E, Kuroda M, Saijo M, Feldmann F, Brining D, Feldmann H, TakadaA. PLoS One, 7:e36192, Apr. 27, 2012; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology, 142(4):551-561, August 2014) was used.


The vector may also comprise promoters, enhancers, splicing signals, poly-A addition signals, intron sequences, selection markers, SV40 replication origins, and so forth.


The present disclosure also provides a host cell transformed by the above vector. It is possible to prepare the anti-PD-1 antibody of the invention by culturing the host cell and collecting the antibody of interest from the resultant culture. Therefore, the present disclosure also provides a method of preparing an antibody, comprising culturing the above-described host cell and collecting the anti-PD-1 antibody of the invention from the culture. In the method of the present disclosure for preparing an antibody, a vector incorporating an artificial genetic DNA comprising a DNA encoding the light chain and a DNA encoding the heavy chain may be transfected into a host cell. Alternatively, a vector incorporating a DNA encoding the light chain and a vector incorporating a DNA encoding the heavy chain may be co-transfected into a host cell.


Examples of the host cell include, but are not limited to, bacterial cells (such as Escherichia bacteria, Bacillus bacteria or Bacillus subtilis), fungal cells (such as yeast or Aspergillus), insect cells (such as S2 cells or Sf cells), animal cells (such as CHO cells, COS cells, HeLa cells, C127 cells, 3T3 cells, BHK cells or HEK 293 cells) and plant cells. Among these, CHO-DG44 cell (CHO-DG44(dfhr−/−)) which is a dihydrofolate reductase deficient cell is preferable.


Introduction of a recombinant vector into a host cell may be performed by the methods disclosed in Molecular Cloning 2nd Edition, J. Sambrook et al., Cold Spring Harbor Lab. Press, 1989 (e.g., the calcium phosphate method, the DEAE-dextran method, transfection, microinjection, lipofection, electroporation, transduction, scrape loading, the shotgun method, etc.) or by infection.


The resultant transformant may be cultured in a medium, followed by collection of the anti-PD-1 antibody of the present disclosure from the culture. When the antibody is secreted into the medium, the medium may be recovered, followed by isolation and purification of the antibody from the medium. When the antibody is produced within the transformed cells, the cells may be lysed, followed by isolation and purification of the antibody from the cell lysate.


Examples of the medium include, but are not limited to, OptiCHO medium, Dynamis medium, CD CHO medium, ActiCHO medium, FortiCHO medium, Ex-Cell CD CHO medium, BalanCD CHO medium, ProCHO 5 medium and Cellvento CHO-100 medium.


The pH of the medium varies depending on the cell to be cultured. Generally, a pH range from 6.8 to 7.6 is used; mostly, a pH range from 7.0 to 7.4 is appropriate.


When the cell to be cultured is CHO cells, culture may be performed by methods known to those skilled in the art. For example, it is usually possible to perform culturing in a gas-phase atmosphere having a CO2 concentration of 0-40%, preferably 2-10%, at 30-39° C., preferably around 37° C.


The appropriate period of culture is usually from one day to three months, preferably from one day to three weeks.


Isolation and purification of the antibody may be performed by known methods.


Known isolation/purification methods which may be used in the present disclosure include, but are not limited to, methods using difference in solubility (such as salting-out or solvent precipitation); methods using difference in molecular weight (such as dialysis, ultrafiltration, gel filtration or SDS-polyacrylamide gel electrophoresis); methods using difference in electric charge (such as ion exchange chromatography); methods using specific affinity (such as affinity chromatography); methods using difference in hydrophobicity (such as reversed phase high performance liquid chromatography); and methods using difference in isoelectric point (such as isoelectric focusing).


The pharmaceutical composition in certain embodiments of the present disclosure may be used for prevention and/or treatment of cancers and/or infections. Examples of cancer and/or infection include, but are not limited to, neoplastic diseases (e.g., malignant melanoma, lung cancer, gastric cancer, renal cancer, breast cancer, bladder cancer, esophageal cancer, ovarian cancer and the like), leukemia, Johne's disease, anaplasmosis, bacterial mastitis, mycotic mastitis, mycoplasma infections (such as mycoplasma mastitis, mycoplasma pneumonia or the like), tuberculosis, Theileria orientalis infection, cryptosporidiosis, coccidiosis, trypanosomiasis and leishmaniasis.


The pharmaceutical composition in certain embodiments of the present disclosure comprises a COX-2 inhibitor and is administered before, after or simultaneously with the administration of an inhibitor targeting PD-1/PD-L1.


In the pharmaceutical composition in certain embodiments of the present disclosure, an inhibitor targeting PD-1/PD-L1 and a COX-2 inhibitor may be used in combination or may be formulated as a single dosage.


In the pharmaceutical composition in certain embodiments of the present disclosure comprises an anti-PD-1 antibody as an antibody drug for animals or human.


When an inhibitor targeting PD-1/PD-L1 and a COX-2 inhibitor are used in combination, the inhibitor targeting PD-1/PD-L1 and the COX-2 inhibitor may be administered separately.


When an inhibitor targeting PD-1/PD-L1 and a COX-2 inhibitor are formulated as a single dosage, a combination drug containing the inhibitor targeting PD-1/PD-L1 and the COX-2 inhibitor may be prepared.


The pharmaceutical composition of the present disclosure can be administered to human or animal subjects systemically or locally by an oral or parenteral route.


The inhibitor targeting PD-1/PD-L1 and/or the anti-PD-1 antibody of the present disclosure may be dissolved in buffers such as PBS, physiological saline or sterile water, optionally filter- or otherwise sterilized before being administered to animal subjects (including human) by injection. To the solution of inhibitors targeting PD-1/PD-L1 or the solution of the anti-PD-1 antibody, additives such as coloring agents, emulsifiers, suspending agents, surfactants, solubilizers, stabilizers, preservatives, antioxidants, buffers, isotonizing agents, pH adjusters and the like may be added. As routes of administration, intravenous, intramuscular, intraperitoneal, subcutaneous or intradermal administration may be selected. Transnasal or oral administration may also be selected.


The content of the inhibitor targeting PD-1/PD-L1 in a preparation varies with the type of the preparation and is usually 1-100% by weight, preferably 50-100% by weight. Such a preparation may be formulated into a unit dosage form.


The dose and the number of times and frequency of administration of the inhibitor targeting PD-1/PD-L1 (e.g., PD-L1 antibody) may vary with the symptoms, age and body weight of the human or animal subject, the method of administration, dosage form and so on. For example, 0.1-100 mg/kg body weight, preferably 1-10 mg/kg body weight, may usually be administered per adult at least once at a frequency that enables obtainment of the desired effect.


The dose and the number of times and frequency of administration of the anti-PD-1 antibody of the present disclosure may vary depending on the symptoms, age and body weight of the animal subject, the method of administration, the dosage form and so on. For example, 0.1-100 mg/kg body weight, preferably 1-10 mg/kg body weight, per adult animal may usually be administered at least once at such a frequency that enables confirmation of desired effect.


A COX-2 inhibitor may be contained in a preparation comprising an inhibitor targeting PD-1/PD-L1. Alternatively, the COX-2 inhibitor either alone or in admixture with an excipient or carrier may be formulated into tablets, capsules, powders, granules, liquids, syrups, aerosols, suppositories, injections or the like. The excipient or carrier may be of any type that is routinely used in the art and pharmaceutically acceptable, with their type and composition being appropriately changed. As a liquid carrier, for example, water, plant oil or the like may be used. As a solid carrier, saccharides such as lactose, sucrose or glucose, starches such as potato starch or corn starch, cellulose derivatives such as microcrystalline cellulose, and the like may be used. Lubricants such as magnesium stearate, binders such as gelatin or hydroxypropyl cellulose, and disintegrants such as carboxymethyl cellulose, and the like may be added. What is more, antioxidants, coloring agents, flavoring agents, preservatives, and the like may also be added.


The COX-2 inhibitor may be administered via various routes such as oral, transnasal, rectal, transdermal, subcutaneous, intravenous or intramuscular route.


The content of the COX-2 inhibitor in a preparation varies with the type of the preparation and is usually 1-100% by weight, preferably 50-100% by weight. In the case of a liquid, for example, the content of the COX-2 inhibitor in the preparation is preferably 1-100% by weight. In the case of a capsule, tablet, granule or powder, the content of the COX-2 inhibitor in the preparation is usually 10-100% by weight, preferably 50-100% by weight, with the balance being the carrier. The preparation may be formulated into a unit dosage form.


The dose and the number of times and frequency of administration of the COX-2 inhibitor may vary with the symptoms, age and body weight of the animal or human subject, the method of administration, dosage form and so on. For example, in terms of the amount of the active ingredient, 0.05 to 20 mg (or ml)/kg body weight may usually be administered per adult at least once at a frequency that enables confirmation of the desired effect.


The ratio (in mass) of inhibitor targeting PD-1/PD-L1 to COX-2 inhibitor is appropriately from 1:100 to 1000:1, preferably from 1:10 to 100:1.


The present disclosure provides a method of preventing and/or treating cancer and/or infection, comprising administering to a human or animal subject a pharmaceutically effective amount of a COX-2 inhibitor before, after or simultaneously with the administration of an inhibitor targeting PD-1/PD-L1.


Further, the present disclosure provides use of a COX-2 inhibitor for preventing and/or treating cancer and/or infection, wherein the COX-2 inhibitor is administered before, after or simultaneously with the administration of an inhibitor targeting PD-1/PD-L1.


Still further, the present disclosure provides use of a COX-2 inhibitor for use in a method of preventing and/or treating cancer and/or infection, wherein the COX-2 inhibitor is administered before, after or simultaneously with the administration of an inhibitor targeting PD-1/PD-L1.


The immunostimulatory effect of an inhibitor targeting PD-1/PD-L1 can be enhanced by using a COX-2 inhibitor in combination. Therefore, the present disclosure provides a potentiator for the immunostimulatory effect of an inhibitor targeting PD-1/PD-L1, which comprises a COX-2 inhibitor.


The potentiator may be used in combination with an inhibitor targeting PD-1/PD-L1 or formulated together with an inhibitor targeting PD-1/PD-L1 into a combination drug. Combined use of an inhibitor targeting PD-1/PD-L1 and a COX-2 inhibitor, as well as formulating them together as a single dosage are as described above. The potentiator may be used as an experimental reagent in addition to its application as a pharmaceutical.


While the pharmaceutical composition according to certain embodiments of the present disclosure may be used alone, it may be used in combination with surgical operations, radiation therapies, other immunotherapies such as cancer vaccine, or molecular target drugs.


Synergistic effect can be expected from such combinations.


EXAMPLES

Hereinbelow, the present disclosure will be described in more detail with reference to the following Examples. However, the present disclosure is not limited to these Examples.


Example 1
Examination of Combined Effect of Anti-PD-L1 Antibody and COX-2 Inhibitor in Dogs
1. Introduction

The interaction between PD-1 and PD-L1 is one of the major molecular mechanisms through which tumors evade immune responses. It has been reported that inhibition of the above interaction by using an antibody which specifically binds to either of those molecules can produce antitumor effects. In the subject Example, toward establishment of a novel control method for canine tumors, the present inventors have confirmed in in vitro tests an immunostimulatory effect induced by a COX-2 inhibitor and enhancement of that effect when the inhibitor is used in combination with anti-PD-L1 antibody.


2. Materials and Methods, as Well as Experimental Results

2.1. PGE2 Production from Canine Tumor Cell Lines


Canine melanoma-derived cell lines of CMeC and LMeC (Ohashi E, Inoue K, Kagechika H, Hong S H, Nakagawa T, et al: Effect of natural and synthetic retinoids on the proliferation and differentiation of three canine melanoma cell lines. J Vet Med Sci 64: 169-172, 2002) as well as CMM-1 and CMM-2 (Ohashi E, Hong S H, Takahashi T, Nakagawa T, Mochizuki M, et al.: Effect of retinoids on growth inhibition of two canine melanoma cell lines. J Vet Med Sci 63: 83-86, 2001) were cultured in RPMI 1640 medium (Sigma) supplemented with 2-mercaptoethanol 2×10−5 M, 10% inactivated fetal bovine serum (Valley Biomedical), antibiotics (streptomycin 100 μg/ml, penicillin 100 U/ml) (Invitrogen) and 2 mM L-glutamine (Invitrogen) at 37° C. in the presence of 5% CO2. A canine osteosarcoma-derived cell line HM-POS (Barroga E F, Kadosawa T, Okumura M, Fujinaga T: Establishment and characterization of the growth and pulmonary metastasis of a highly lung metastasizing cell line from canine osteosarcoma in nude mice. J Vet Med Sci 61: 361-367, 1999) was cultured in Dulbecco's Modified Eagle Medium (D-MEM; Invitrogen) supplemented with 10% inactivated fetal bovine serum (Valley Biomedical), antibiotics (streptomycin 100 μg/ml, penicillin 100 U/ml) (Invitrogen) and 2 mM L-glutamine (Invitrogen) at 37° C. in the presence of 5% CO2. Cells adjusted to a density of 5×105 cells/mL were cultured for 24 hours. The amount of PGE2 in the culture supernatant was quantified with Prostaglandin E2 Express EIA Kit (Cayman Chemical). As a result, CMM-1 and HM-POS showed a relatively high PGE2 production (FIG. 1).


2.2. COX2 Expression in Canine Tumor Cell Lines

From the canine tumor-derived cell lines cultured as described in section 2.1. of Materials and Methods, RNA was extracted with TRI reagent (Molecular Research Center) and the concentration thereof was measured with NanoDrop8000 (Thermo Scientific). RNA samples were stored at −80° C. until use in experiments.


To 1 μg of the thus obtained RNA, DNase I Reaction buffer and 1 U DNase I Amplification Grade (Invitrogen) were added. Then, deionized distilled water was added to make a 10 μl solution, which was subjected to DNase I treatment at room temperature for 15 mn. Subsequently, 25 nmol ethylenediaminetetraacetic acid (EDTA) was added and the resultant mixture was treated at 65° C. for 10 min. Then, 200 pmol oligo-dT primer was added to the reaction mixture which was treated at 65° C. for 5 min. Thereafter, reverse transcription reaction solution [PrimeScript Buffer (TaKaRa), 7.5 nmol dNTPs, 20 U RNase Plus RNase inhibitor (Promega), 100 U PrimeScript RTase (TaKaRa)] was added to give a final volume of 20 μl. Reverse transcription reaction was carried out at 42° C. for 60 min to thereby synthesize a single-stranded cDNA.


Primers (canine COX2 rt F and canine COX2 rt R; canine HPRT1 rt F and canine HPRT1 rt R) were designed based on the nucleotide sequences of canine COX2 (NM_001003354.1) and canine HPRT1 (AY283372.1) registered at the National Center for Biotechnology Information (NCBI), and real-time PCR was performed. Using 1 μl of the cDNA of each tumor-derived cell line as a template, real-time PCR was performed with LightCycler480 System II (Roche) in a PCR reaction mixture containing 0.3 μl each of primers canine COX2 rt F and canine COX2 rt R or canine HPRT1 rt F and canine HPRT1 rt R (each of which had been adjusted to a concentration of 10 pmol/μl), 5 μl of SYBR Premix DimerEraser (TaKaRa) and 3.4 μl of DDW under the conditions described below.











Primer (canine COX2 rt F):



(SEQ ID NO: 108)



AAGCTTCGATTGACCAGAGCAG







Primer (canine COX2 rt R):



(SEQ ID NO: 109)



TCACCATAAAGGGCCTCCAAC







Primer (canine HPRT1 rt F):



(SEQ ID NO: 110)



TGGCGTCGTGATTAGTGATGA







Primer (canine HPRT1 rt R):



(SEQ ID NO: 111)



CAGAGGGCTACGATGTGATGG






(PCR Reaction Conditions)





    • 1. Pre incubation 95° C. for 30 sec

    • 2. Quantification 50 cycles each consisting of the following 3 steps:
      • I. Thermal denaturation 95° C. for 5 sec
      • II. Annealing 58° C. for 30 sec
      • III. Extension 72° C. for 30 sec

    • 3. Melting curve
      • I. 95° C. for 1 sec
      • II. 65° C. for 15 sec
      • III. 95° C. continue

    • 4. Cooling 40° C.





The resultant COX2 mRNA expression level was divided by the expression level of internal control gene HPRT1 mRNA, and the thus obtained value was taken as COX2 expression level. As it turned out, COX2 expression level was high in CMM-1 and HM-POS, consistent with the results of PGE2 production in culture supernatant (FIG. 2; Tukey's multiple comparison test; P<0.05).


2.3. Effect of PGE2 on Cytokine Production from Canine Peripheral Blood Mononuclear Cells


Peripheral blood mononuclear cells (PBMCs) were isolated from heparinized canine peripheral blood samples collected from healthy beagles and mixed breed dogs by density gradient centrifugation using Percoll (GE Healthcare). The resultant PBMCs were cultured in RPMI 1640 medium (Sigma), supplemented with 10% inactivated fetal bovine serum (Valley Biomedical), antibiotics (streptomycin 100 μg/ml, penicillin 100 U/ml) (Invitrogen) and 2 mM L-glutamine (Invitrogen) and further supplemented with 5 μg/ml of Staphylococcal Enterotoxin B (SEB) (Sigma) and 1 μg/ml of Anti-Canine CD28 (eBioscience), at 37° C. in the presence of 5% CO2 for 3 days. Production of interleukin 2 (IL-2) and interferon γ (IFN-γ) into the culture supernatant upon addition of prostaglandin E2 (Cayman Chemical) at a final concentration of 2.5 μM was measured with Canine IL-2 DuoSet ELISA (R&D systems) and Canine IFN-gamma DuoSet ELISA (R&D systems). PGE2 significantly decreased IL-2 and IFN-γ productions from canine PBMCs (FIG. 3; Wilcoxon signed-rank test; P<0.01 and P<0.05).


2.4. PGE2 Production Inhibitory Effect of COX-2 Inhibitor

Canine tumor cell lines CMM-1 and HM-POS were cultured as described in section 2.1 of Materials and Methods, and meloxicam (Sigma) was added to give a final concentration of 5 μM. PGE2 production from each tumor cell line was quantified by ELISA. PGE2 production showed a tendency to decrease as a result of addition of meloxicam (FIG. 4). Further, canine PBMCs were cultured as described in section 2.3 of Materials and Methods, and meloxicam (Sigma) was added to give a final concentration of 5 μM. As a result, PGE2 production from PBMCs decreased significantly (FIG. 5; Wilcoxon signed-rank test; P<0.05).


2.5. Effect of COX-2 Inhibitor on Cytokine Production from Canine Peripheral Blood Mononuclear Cells


Canine PBMCs were cultured as described in section 2.3 of Materials and Methods, and meloxicam (Sigma) was added to give a final concentration of 5 μM. Then, IL-2 concentration in the culture supernatant was quantified by ELISA. IL-2 production from canine PBMCs was increased significantly as a result of addition of meloxicam (FIG. 6; Wilcoxon signed-rank test; P<0.01).


2.6. Enhancement of Canine PBMC Activation Effect by Combined Use of Anti-PD-L1 Antibody and COX-2 Inhibitor

Canine PBMCs were cultured as described in section 2.3 of Materials and Methods. To the resultant PBMCs, rat-canine chimeric anti-PD-L1 antibody c4G12 (Maekawa et al., data in submission; see Reference Example 1 described below) and meloxicam (Sigma) were added to give final concentrations of 20 μg/mL and 5 μM, respectively. Subsequently, IL-2 concentration in the culture supernatant was quantified by ELISA. Although the PD-L1 antibody taken alone increased IL-2 production, combined use of meloxicam further increased IL-2 production (FIG. 7; Steel-Dwass test; P<0.05).


Reference Example 1
Rat-Canine Chimeric Anti-PD-L1 Antibody
1. Introduction

Programmed cell death 1 (PD-1), an immunoinhibitory receptor, and its ligand programmed cell death ligand 1 (PD-L1) are molecules identified by Prof Tasuku Honjo et al., Kyoto University, as factors which inhibit excessive immune response and are deeply involved in immunotolerance. Recently, it has been elucidated that these molecules are also involved in immunosuppression in tumors. In the subject Example, for the purpose of establishing a novel therapy for canine neoplastic diseases, a chimeric antibody gene was prepared in which a variable region gene of a rat anti-bovine PD-L1 monoclonal antibody (4G12) capable of inhibiting the binding of canine PD-1 to PD-L1 was linked to a constant region gene of a canine immunoglobulin (IgG4). The resultant chimeric antibody gene was introduced into Chinese hamster ovary cells (CHO cells), which were cultured to produce a rat-canine chimeric anti-PD-L1 antibody c4G12. The effect of this chimeric antibody was confirmed in vitro and in vivo.


2. Materials and Methods
2.1 Bovine PD-L1 Monoclonal Antibody Producing Cells

The nucleotide sequence of bovine PD-L1 was identified (Ikebuchi R, Konnai S, Shirai T, Sunden Y, Murata S, Onuma M, Ohashi K. Vet Res. 2011 Sep. 26; 42:103). Based on the sequence information, a recombinant bovine PD-L1 was prepared. Rat was immunized with this recombinant protein to prepare a rat anti-bovine PD-L1 antibody (Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology. 2014 August; 142(4):551-61; Clone 4G12 which would later serve as the variable region of the canine chimeric antibody of interest is described in this article.)


2.2 Identification of Full-Length Canine PD-1 and PD-L1 Genes

To determine the full lengths of canine PD-1 and PD-L1 cDNAs, PCR primers were first designed based on the putative nucleotide sequences of canine PD-1 and PD-L1 already registered at The National Center for Biotechnology Information (NCBI) (GenBank accession number; XM_543338 and XM_541302). Briefly, primers to amplify the inner sequence of the open reading frame (ORF) of each gene were designed (cPD-1 inner F and R, cPD-L1 inner F and R), and PCR was performed. For the amplified products, nucleotide sequences were determined with a capillary sequencer according to conventional methods. Further, to determine the nucleotide sequences of full-length PD-1 and PD-L1 cDNA, primers (cPD-1 5′ GSP and 3′ GSP; cPD-L1 5′ GSP and 3′GSP) were designed based on the canine PD-1 and PD-L1 cDNA sequences determined above. 5′-RACE and 3′-RACE were then performed using the 5′-RACE system for rapid amplification of cDNA ends and 3′-RACE system for rapid amplification of cDNA ends (Invitrogen), respectively. The resultant gene fragments of interest were sequenced as described (Maekawa N, Konnai S, Ikebuchi R, Okagawa T, Adachi M, Takagi S, Kagawa Y, Nakajima C, Suzuki Y, Murata S, Ohashi K. PLoS One. 2014 Jun. 10; 9(6):e98415).











Primer (cPD-1 inner F):



(SEQ ID NO: 21)



AGGATGGCTCCTAGACTCCC



Primer (cPD-1 inner R):



(SEQ ID NO: 22)



AGACGATGGTGGCATACTCG



Primer (cPD-L1 inner F):



(SEQ ID NO: 23)



ATGAGAATGTTTAGTGTCTT



Primer (cPD-L1 inner R):



(SEQ ID NO: 24)



TTATGTCTCTTCAAATTGTATATC



Primer (cPD-1 5′GSP):



(SEQ ID NO: 25)



GTTGATCTGTGTGTTG



Primer (cPD-1 3′GSP):



(SEQ ID NO: 26)



CGGGACTTCCACATGAGCAT



Primer (cPD-L1 5′GSP):



(SEQ ID NO: 27)



TTTTAGACAGAAAGTGA



Primer (cPD-L1 3′GSP):



(SEQ ID NO: 28)



GACCAGCTCTTCTTGGGGAA






2.3 Construction of Canine PD-1 and PD-L1 Expressing COS-7 Cells

For preparing canine PD-1-EGFP and PD-L1-EGFP expression plasmids, PCR was performed using a synthesized beagle PBMC-derived cDNA as a template and primers designed by adding XhoI and BamHI recognition sites (PD-1) and BglII and EcoRI recognition sites (PD-L1) on the 5′ side (cPD-1-EGFP F and R; cPD-L1-EGFP F and R). The resultant PCR products were digested with XhoI (Takara) and BamHI (Takara) (PD-1) and with BglII (New England Biolabs) and EcoRI (Takara) (PD-L1), and then purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics), followed by cloning into pEGFP-N2 vector (Clontech) treated with restriction enzymes in the same manner. The resultant expression plasmids of interest were extracted with QIAGEN Plasmid Midi kit (Qiagen) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared expression plasmids are designated as pEGFP-N2-cPD-1 and pEGFP-N2-cPD-L1.











Primer (cPD-1-EGFP F):



(SEQ ID NO: 29)



CCGCTCGAGATGGGGAGCCGGCGGGGGCC






Primer (cPD-1-EGFP R):



(SEQ ID NO: 30)



CGCGGATCCTGAGGGGCCACAGGCCGGGTC






Primer (cPD-L1-EGFP F):



(SEQ ID NO: 31)



GAAGATCTATGAGAATGTTTAGTGTC






Primer (cPD-L1-EGFP R):



(SEQ ID NO: 32)



GGAATTCTGTCTCTTCAAATTGTATATC






COS-7 cells were subcultured at a density of 5×104 cells/cm2 in 6-well plates, and then cultured overnight in RPMI 1640 medium containing 10% inactivated fetal bovine serum and 0.01% L-glutamine at 37° C. in the presence of 5% CO2. The pEGFP-N2-cPD-1, pEGFP-N2-cPD-L1 or pEGFP-N2 (negative control) was introduced into COS-7 cells at 0.4 μg/cm2 using Lipofectamine 2000 (Invitrogen). The cells were cultured for 48 hours (cPD-1-EGFP expressing cell and cPD-L1-EGFP expressing cell). In order to confirm the expression of canine PD-1 and PD-L1 in the thus prepared expressing cells, intracellular localization of enhanced green fluorescent protein (EGFP) was visualized with an inverted confocal laser microscope LSM700 (ZEISS) (Maekawa N, Konnai S, Ikebuchi R, Okagawa T, Adachi M, Takagi S, Kagawa Y, Nakajima C, Suzuki Y, Murata S, Ohashi K. PLoS One. 2014 Jun. 10; 9(6):e98415).


2.4 Construction of Recombinant Canine PD-1, PD-L1 and CD80

In order to amplify the extracellular regions of canine PD-1, PD-L1 and CD80 estimated from their putative amino acid sequences, primers were designed. Briefly, primers having an NheI or EcoRV recognition sequence (PD-1 and PD-L1) added on the 5′ side (cPD-1-Ig F and R; cPD-L1-Ig F and R) or having an EcoRV or KpnI (CD80) recognition sequence added on the 5′ side (cCD80-Ig F and R) were designed. PCR was performed using a synthesized beagle PBMC-derived cDNA as a template. The PCR products were digested with NheI (Takara) and EcoRV (Takara) or with EcoRV (Takara) and KpnI (New England Biolabs) and purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics). The thus purified DNAs were individually cloned into pCXN2.1-Rabbit IgG Fc vector (Niwa et al., 1991; Zettlmeissl et al., 1990; kindly provided by Dr. T. Yokomizo, Juntendo University Graduate School of Medicine, and modified in the inventors' laboratory) treated with restriction enzymes in the same manner. The expression plasmids were purified with QIAGEN Plasmid Midi kit (Qiagen) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared expression plasmids are designated as pCXN2.1-cPD-1-Ig, pCXN2.1-cPD-L1-Ig and pCXN2.1-cCD80-Ig, respectively.











Primer (cPD-1-Ig F):



(SEQ ID NO: 33)



CGCGGCTAGCATGGGGAGCCGGCGGGGGCC






Primer (cPD-1-Ig R):



(SEQ ID NO: 34)



CGCGGATATCCAGCCCCTGCAACTGGCCGC






Primer (cPD-L1-Ig F):



(SEQ ID NO: 35)



CGCGGCTAGCATGAGAATGTTTAGTGTCTT






Primer (c-PD-L1-Ig R):



(SEQ ID NO: 36)



CGCGGATATCAGTCCTCTCACTTGCTGGAA






Primer (cCD80-Ig F):



(SEQ ID NO: 104)



CGCGGATATCATGGATTACACAGCGAAGTG






Primer (cCD80-Ig R):



(SEQ ID NO: 105)



CGGGGTACCCCAGAGCTGTTGCTGGTTAT






These expression vectors were individually transfected into Expi293F cells (Life Technologies) to obtain a culture supernatant containing a recombinant Ig fusion protein. The recombinant protein produced was purified from the supernatant with Ab Capcher Extra (Protein A mutant; ProteNova). After buffer exchange with phosphate-buffered physiological saline (PBS; pH 7.4) using PD-MidiTrap G-25 (GE Healthcare), each recombinant protein was stored at −30° C. until use in experiments (cPD-1-Ig, cPD-L1-Ig and cCD80-Ig). The concentration of each protein was measured with Pierce BCA Protein Assay Kit (Thermo Fisher Scientific) before use in subsequent experiments.


2.5 Identification of Rat Anti-Bovine PD-L1 Monoclonal Antibody Showing Cross-Reactivity with Canine PD-L1


In order to identify rat anti-bovine PD-L1 monoclonal antibody showing cross-reactivity with canine PD-L1, flow cytometry was performed using the anti-bovine PD-L1 antibody prepared in 2.1 above. The anti-bovine PD-L1 antibody (10 μg/ml) was reacted with 2×105-1×106 cells at room temperature for 30 min. After washing, the anti-bovine PD-L1 antibody was detected with allophycocyanine-labeled anti-rat Ig goat antibody (Beckman Coulter). FACS Verse (Becton, Dickinson and Company) was used for analysis. As negative controls, rat IgG2a (κ) isotype control (BD Biosciences), rat IgG1 (κ) isotype control (BD Biosciences) and rat IgM (κ) isotype control (BD Biosciences) were used. For every washing operation and dilution of antibodies, 10% inactivated goat serum-supplemented PBS was used (MaekawaN, Konnai S, Ikebuchi R, Okagawa T, Adachi M, Takagi S, KagawaY, Nakajima C, Suzuki Y, Murata S, Ohashi K. PLoS One. 2014 Jun. 10; 9(6):e98415 which is an article describing the use of three bovine PD-L1 monoclonal antibodies: 4G12 (Rat IgG2a (κ)), 5A2 (Rat IgG1 (κ)) and 6G7 (Rat IgM (κ)).


2.6 Selection Test of Variable Region for Establishment of Rat-Canine Chimeric Anti-PD-L1 Antibody

Out of 10 clones of rat anti-bovine PD-L1 monoclonal antibody which showed cross-reactivity with canine PD-L1, 4G12 (Rat IgG2a (κ)), 5A2 (Rat IgG1 (κ)) and 6G7 (Rat IgM (κ)) were selected and check was made to see whether these antibodies would inhibit canine PD-1/PD-L1 binding. Briefly, canine PD-1-Ig (prepared in 2.4 above) was immobilized on flat bottomed 96-well plates and blocked with 1% BSA and 0.05% Tween 20-containing PBS. Canine PD-L1-Ig (prepared in 2.4 above) was biotinylated using Lightning-Link Biotin Conjugation Kit (Innova Bioscience) and reacted with various concentrations (0, 2.5, 5 and 10 μg/ml) of rat anti-bovine PD-L1 antibodies 4G12, 5A2 and 6G7 at 37° C. for 30 min, followed by addition to the 96-well plates. The binding of cPD-L1-Ig to cPD-1-Ig was measured by color reaction using Neutravidin-HRP (Thermo Fisher Scientific) and TMB one component substrate (Bethyl Laboratories). As a result, rat anti-bovine PD-L1 monoclonal antibodies 4G12 and 6G7 showed a good inhibitory activity against canine PD-1/PD-L1 binding, whereas 5A2 showed no binding inhibitory activity (FIG. 8).


2.7 Preparation of Rat-Canine Chimeric Anti-PD-L1 Antibody Expressing Vector (FIG. 9)

Using rat anti-bovine PD-L1 monoclonal antibodies 4G12 and 6G7 which showed a good inhibitory activity against canine PD-1/PD-L1 binding (FIG. 1) as the variable region, two types of rat-canine chimeric anti-PD-L1 antibodies were established. Briefly, heavy chain and light chain variable region genes were identified from hybridomas producing rat anti-bovine PD-L1 monoclonal antibodies 4G12 and 6G7. Further, the heavy chain and light chain variable region genes of the above rat antibodies were linked to the constant region of heavy chain IgG4 and the constant region of light chain Lambda of a known canine antibody, respectively, to prepare nucleotide sequences, followed by codon optimization (SEQ ID NOS: 9 and 10 (amino acid sequences), SEQ ID NOS: 19 and 20 (nucleotide sequences after codon optimization). Then, synthesis of genes was performed so that Nod restriction enzyme recognition site, KOZAK sequence, chimeric antibody's light chain sequence, poly-A addition signal sequence (PABGH), promoter sequence (PCMV), Sad restriction enzyme recognition site, intron sequence (INRBG), KOZAK sequence, chimeric antibody's heavy chain sequence and XbaI restriction enzyme recognition site would be located in this order. The synthesized gene strands were individually incorporated into the cloning site (Nod and XbaI restriction enzyme recognition sequences downstream of PCMV and between INRBG and PABGH) of expression vector pDC6 (kindly provided by Prof. S. Suzuki, Hokkaido University Research Center for Zoonosis Control) using restriction enzyme recognition sequences so that the above-listed sequences would be located in the above-mentioned order (FIG. 9). Thus, rat-canine chimeric anti-PD-L1 antibody expressing vectors were constructed. Each of the expression vectors was transfected into Expi293F cells (Life Technologies) to obtain a culture supernatant containing a chimeric antibody. The chimeric antibody was purified from the supernatant with Ab Capcher Extra (Protein A mutant; ProteNova) and further purified by gel filtration chromatography. SDS-PAGE was performed under non-reducing conditions using 10% acrylamide gel. Bands were stained with Quick-CBB kit (Wako Pure Chemical) and decolorized in distilled water. Although contaminant proteins were observed after protein A purification alone, a highly purified antibody could be obtained by performing gel filtration chromatography (FIG. 10). It was confirmed by flow cytometry that the resultant purified antibodies specifically bound to canine PD-L1 expressing cells (data not shown). When the inhibitory activity of the two chimeric antibodies against canine PD-1/PD-L1 binding was examined by the method described in 2.6 above, rat-canine chimeric anti-PD-L1 antibody c4G12 showed a binding inhibitory activity similar to that of its original rat anti-bovine PD-L1 monoclonal antibody 4G12, whereas binding inhibition capacity was clearly attenuated in rat-canine chimeric anti-PD-L1 antibody c6G7 (FIG. 4) Therefore, rat-canine chimeric anti-PD-L1 antibody c4G12 was selected as a therapeutic antibody, which incorporated the variable region sequences of rat anti-bovine PD-L1 monoclonal antibody 4G12 (SEQ ID NOS: 2 and 1 (amino acid sequences) and SEQ ID NOS: 16 and 15 (nucleotide sequences after codon optimization)). The amino acid sequence and the nucleotide sequence (after codon optimization) of the light chain of c4G12 are shown in SEQ ID NOS: 9 and 19, and the amino acid sequence and the nucleotide sequence (after codon optimization) of the heavy chain of c4G12 are shown in SEQ ID NOS: 10 and 20.


2.8 Expression of Rat-Canine Chimeric Anti-PD-L1 Antibody c4G12


Rat-canine chimeric anti-PD-L1 antibody c4G12 expressing vector pDC6 as used in 2.7 above was transfected into CHO-DG44 cells (CHO-DG44(dfhr−/−)) which were dihydrofolate reductase deficient cells and high expression clones were selected by dot blotting. Further, gene amplification treatment was performed by adding load on cells in a medium containing 60 nM methotrexate (Mtx). Cells stably expressing rat-canine chimeric anti-PD-L1 antibody c4G12 (clone name: 4.3F1) after gene amplification were transferred to Mtx-free Opti-CHO medium and cultured under shaking for 14 days (125 rpm, 37° C., 5% CO2). Cell survival rate was calculated by trypan blue staining (FIG. 12). Chimeric antibody production in the culture supernatant was measured by ELISA (FIG. 12). The culture supernatant at day 14 was centrifuged at 10,000 g for 10 min to remove cells, then passed through a 0.22 μm filter before the process proceeded to purification steps for the antibody.


It should be noted that by exchanging the medium with Dynamis medium and doing appropriate feeding, antibody production was improved about two-fold compared to the conventional production (data not shown).


2.9 Purification of Rat-Canine Chimeric Anti-PD-L1 Antibody c4G12


The culture supernatant provided as described above was purified with Ab Capcher Extra (ProteNova). An open column method was used for binding to resin; PBS pH 7.4 was used as equilibration buffer and wash buffer. As elution buffer, IgG Elution Buffer (Thermo Scientific) was used. As neutralization buffer, 1 M Tris was used. The purified antibody was concentrated and buffer-exchanged with PBS by ultrafiltration using Amicon Ultra-15 (50 kDa, Millipore). The resultant antibody was passed through a 0.22 μm filter for use in respective experiments.


2.10 Confirmation of Purification of Rat-Canine Chimeric Anti-PD-L1 Antibody c4G12 (FIG. 13)


In order to confirm the purity of the purified antibody, antibody proteins were detected by SDS-PAGE and CBB staining. Using SuperSep Ace 5-20% (Wako) gradient gel, rat anti-bovine PD-L1 monoclonal antibody 4G12 and rat-canine chimeric anti-PD-L1 antibody c4G12 were electrophoresed under reducing conditions and non-reducing conditions. Bands were stained with Quick-CBB kit (Wako) and decolored in distilled water. Bands were observed at positions of molecular weights corresponding to antibodies. No bands of contaminant proteins were recognized visually.


2.11 Measurement of Binding Avidities to cPD-L1-His of Rat Anti-Bovine PD-L1 Monoclonal Antibody 4G12 and Rat-Canine Chimeric Anti-PD-L1 Antibody c4G12


In order to amplify the extracellular region of canine PD-L1 estimated from its putative amino acid sequence, primers were designed. Briefly, a primer having an NheI recognition sequence added on the 5′ side (cPD-L1-His F) and a primer having an EcoRV recognition sequence and 6xHis tag sequence added on the 5′ side (cPD-L1-His R) were designed. PCR was performed using a synthesized beagle PBMC-derived cDNA as a template. The PCR products were digested with NheI (Takara) and EcoRV (Takara) and purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics). The thus purified DNA was cloned into pCXN2.1 vector (Niwa et al., 1991; kindly provided by Dr. T. Yokomizo, Juntendo University Graduate School of Medicine) treated with restriction enzymes in the same manner. The expression plasmids were purified with QIAGEN Plasmid Midi kit (Qiagen) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared expression plasmid is designated as CXN2.1-cPD-L1-His.











Primer (cPD-L1-His F):



(SEQ ID NO: 106)



CGCGGCTAGCATGAGAATGTTTAGTGTCTT






Primer (cPD-L1-His R):



(SEQ ID NO: 107)



CGCGGATATCTTAATGGTGATGGTGATGGT






GAGTCCTCTCACTTGCTGG 






The expression vector was transfected into Expi293F cells (Life Technologies) to obtain a culture supernatant containing a recombinant protein. The recombinant protein produced was purified from the supernatant using TALON Metal Affinity Resin (Clontech), and the buffer was exchanged with PBS using Amicon Ultra-4 Ultracel-3 (Merck Millipore). The thus obtained recombinant protein was stored at 4° C. until use in experiments (cPD-L1-His). The protein concentration was measured with Pierce BCA Protein Assay Kit (Thermo Fisher Scientific) for use in subsequent experiments.


Using a biomolecular interaction analyzer (Biacore X100), the binding avidities to cPD-L1-His of rat anti-bovine PD-L1 monoclonal antibody 4G12 and rat-canine chimeric anti-PD-L1 antibody c4G12 were assessed. Briefly, anti-histidine antibody was fixed on CM5 censor chip, followed by capturing of cPD-L1-His. Subsequently, monoclonal antibodies were added as analyte to observe specific binding. Both antibodies exhibited specific binding and their avidities were almost comparable (Table 1). Further, the binding avidities of canine PD-1-Ig and CD80-Ig to cPD-L1-His were measured in the same manner and found to be clearly lower than that of rat-canine chimeric anti-PD-L1 antibody c4G12 (Table 1).









TABLE 1







Binding Avidity of Each Antibody and


Recombinant Protein to Canine PD-L1-His













ka (×106/Ms)
kd (×10−3/s)
KD (nM)







4G12
2.42 ± 0.10
4.54 ± 0.19
1.88 ± 0.06



c4G12
3.14 ± 0.19
7.19 ± 0.26
2.30 ± 0.07



cPD-1


25.4 ± 4.89



cCD80


24.3 ± 0.89











2.12 Inhibitory Activity of Rat-Canine Chimeric Anti-PD-L1 Antibody c4G12 against Canine PD-1/PD-L1 Binding and CD80/PD-L1 Binding (FIG. 14)


Using the canine PD-1-Ig, PD-L1-Ig and CD80-Ig (described above), anti-PD-L1 antibody was tested for its ability to inhibit canine PD-1/PD-L1 binding and CD80/PD-L1 binding. Briefly, canine PD-1-Ig or CD80-Ig was immobilized on flat-bottom 96-well plates. Canine PD-L1-Ig was reacted with various concentrations (0, 2.5, 5 and 10 μg/ml) of rat anti-bovine PD-L1 antibody 4G12 or rat-canine chimeric anti-PD-L1 antibody c4G12 according to the same procedures as described in 2.6 above, and the binding of canine PD-L1-Ig was assessed. No change in binding inhibition activity was observed due to the chimerization of antibody.


2.13. Canine Immune Cell Activating Effect of Rat-Canine Chimeric Anti-PD-L1 Antibody c4G12 (FIG. 15)


Canine PBMCs were cultured under stimulation with a superantigen Staphylococcal Enterotoxin B (SEB) for three days, and changes in cytokine production by addition of rat-canine chimeric anti-PD-L1 antibody c4G12 were measured by ELISA using Duoset ELISA canine IL-2 or IFN-γ (R&D systems). Rat-canine chimeric anti-PD-L1 antibody c4G12 increased the production of IL-2 and IFN-γ from canine PBMCs. Further, nucleic acid analogue EdU was added to the culture medium at day 2 of the culture under SEB stimulation. Two hours later, uptake of EdU was measured by flow cytometry using Click-iT Plus EdU flow cytometry assay kit (Life Technologies). As a result, EdU uptake in canine CD4+ and CD8+ lymphocytes was enhanced by addition of rat-canine chimeric anti-PD-L1 antibody c4G12, indications an elevated cell proliferation capacity.


2.14 Selection of Tumor-Affected Dogs to be Used in Canine Inoculation Test

Since the subject treatment is expected to manifest a higher efficacy when PD-L1 is being expressed in tumors, PD-L1 expression analysis at the tumor site of dogs was performed by immunohistochemical staining. Briefly, tumor tissue samples fixed with formaldehyde and embedded in paraffin were sliced into 4 μm thick sections with a microtome, attached to and dried on silane-coated slide glass (Matsunami Glass) and deparaffinized with xylene/alcohol. While the resultant sections were soaked in citrate buffer [citric acid (Wako Pure Chemical) 0.37 g, trisodium citrate dihydrate (Kishida Chemical) 2.4 g, distilled water 1000 ml], antigen retrieval treatment was performed for 10 min with microwave, followed by staining using a Nichirei automatic immuno-staining device. As pretreatment, sample sections were soaked in 0.3% hydrogen peroxide-containing methanol solution at room temperature for 15 min and washed with PBS. Then, anti-bovine PD-L1 monoclonal antibody was added and reaction was conducted at room temperature for 30 min. After washing with PBS, histofine simple stain MAX-PO (Rat) (Nichirei Bioscience) was added and reaction was carried at room temperature for 30 min, followed by coloring with 3,3′-diaminobenzidine tetrahydrocholride and observation with a light microscope. Dogs with oral melanoma or undifferentiated sarcoma in which tumor cells were PD-L1 positive were used in the following inoculation test (clinical trial). Anti-bovine PD-L1 monoclonal antibody was established from a rat anti-bovine PD-L1 monoclonal antibody producing hybridoma (Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology. 2014 August; 142(4):551-61).


2.15 Inoculation Test on Dogs

With respect to the rat-canine chimeric anti-PD-L1 antibody c4G12 to be inoculated into dogs in the clinical trial, the culture supernatant obtained by the procedures described in 2.8 above was purified by affinity chromatography using MabSelect SuRe LX (GE Healthcare) and then by hydroxyapatite chromatography using BioScale CHT20-I prepacked column (Bio-Rad) in order to remove contaminants and polymeric proteins. Aggregate-containing fractions were further purified by anion exchange chromatography using HiScreen Q-Sepharose HP prepacked column (GE Healthcare).


(1) Safety Test: The established rat-canine chimeric anti-PD-L1 antibody c4G12 was administered intravenously into a dog (beagle, spayed female, 13-year-old, about 10 kg in body weight) at 2 mg/kg, every 2 weeks, 3 times in total. There was observed no anaphylaxis or other adverse effects that would cause any trouble in clinical trials. (2) Clinical Trial 1: The established rat-canine chimeric anti-PD-L1 antibody c4G12 was administered intravenously into a PD-L1 positive dog with relapsed oral melanoma (FIG. 16A) (miniature dachshund, male, 11-year-old, about 7.5 kg in body weight) at 2 mg/kg or 5 mg/kg, every 2 weeks, 22 times in total. At week 10 after the start of treatment, a remarkable reduction in tumor size was recognized. At week 34 after the start of treatment, a still further reduction was confirmed (FIG. 10). During the observation period of 44 weeks, no metastases to lymph nodes or the lung were observed. When 30% or more reduction in the longest diameter of tumor compared to that at the baseline is defined as PR (partial response), the criterion of PR was satisfied at weeks 16-20 and at week 34 and thereafter (FIG. 18).


(3) Clinical Trial 2: Rat-canine chimeric anti-PD-L1 antibody c4G12 was administered intravenously into a dog with undifferentiated sarcoma whose primary lesion was PD-L1 positive (FIG. 16B) and who had a plurality of metastatic lesions in muscles throughout the body (west highland white terrier, castrated male, 12-year-old, about 8 kg in body weight) at 5 mg/kg, every 2 weeks, 2 times in total. At week 3 from the start of treatment, a clear regression of tumor was recognized (FIG. 19).


(4) Clinical Trial 3: Rat-canine chimeric anti-PD-L1 antibody c4G12 was administered intravenously into a dog with oral melanoma whose primary lesion had been removed by surgery (beagle, spayed female, 11-year-old, about 10 kg in body weight) at 2 mg/kg or 5 mg/kg, every 2 weeks, 9 times in total. At week 18 after the start of treatment, a plurality of pulmonary metastatic lesions disappeared (FIG. 20),


(5) Clinical Trial 4: Rat-canine chimeric anti-PD-L1 antibody c4G12 was administered intravenously into 4 dogs with oral melanoma with pulmonary metastasis at 2 mg/kg or 5 mg/kg, every 2 weeks. Although no clear reduction in tumor size was observed during the observation period, the duration of the treated dogs' survival after confirmation of pulmonary metastasis tended to be longer than that of a control group (antibody not administered, historical control group: n=15) (FIG. 21). Therefore, the survival duration may have been extended by antibody administration.


2.16 CDR Analysis of Anti-PD-L1 Antibody

The complementarity-determining regions (CDRs) of rat anti-bovine PD-L1 antibody 4G12 were determined using NCBI IGBLAST (http://www.ncbi.nlm.nih.gov/igblast/). The results are shown in FIG. 22.


Example 2

Examination of Combined Effect of Anti-Bovine PD-L1 Antibody and COX-2 Inhibitor in Cattle with Johne's Disease


1. Introduction

The interaction between PD-1 and PD-L1 is one of the major molecular mechanisms through which pathogens evade immune responses. It has been reported that inhibition of the above interaction by using an antibody which specifically binds to either of those molecules can produce anti-pathogenic effects. In the subject Example, toward establishment of a novel control method against Johne's disease, the present inventors have confirmed in in vitro tests an immunostimulatory effect induced by a COX-2 inhibitor and enhancement of that effect when the inhibitor is used in combination with anti-bovine PD-L1 antibody.


2. Materials and Methods, as Well as Experimental Results
2.1. Examination of Immunosuppressive Effects of PGE2

In order to examine the immunosuppressive effects of PGE2 in cattle, the present inventors evaluated how PBMCs derived from uninfected cattle stimulated with anti-CD3 monoclonal antibody and anti-CD28 monoclonal antibody changed in proliferation capacity and cytokine production capacity as well as in expression levels of cytokine and transcription factor genes and PD-L1 in the presence of PGE2.


(1) Changes in Cell Proliferation Capacity Induced by PGE2

Peripheral blood mononuclear cells (PBMCs) derived from cattle not infected with Mycobacterium avium subsp. paratuberculosis (hereinafter, referred to as “uninfected cattle”) were seeded in 96-well plates (Corning) at 4×105 cells/well. The cells were cultured in RPMI 1640 medium (Sigma-Aldrich) supplemented with 10% inactivated fetal bovine serum (Thermo Fisher Scientific), antibiotics (streptomycin 100 μg/ml, penicillin 100 U/ml) (Thermo Fisher Scientific) and 2 mM L-glutamine (Thermo Fisher Scientific) for 3 days at 37° C. in the presence of 5% CO2. The PBMCs were labeled with Carboxyfluorescein Diacetate Succinimidyl Ester (CFSE, Invitrogen). To the medium, 10-fold serially diluted PGE2 (from 2.5 nM to 2,500 nM) (Cayman Chemical) or, as a negative control, phosphate buffered physiological saline (PBS, pH 7.2, Wako Pure Chemical) was added to give a total volume of 200 μl. As stimulants for T cells, 1 μg/ml of anti-CD3 monoclonal antibody (MM1A; Washington State University Monoclonal Antibody Center) and 1 μg/ml of anti-CD28 monoclonal antibody (CC220; Bio-Rad) were added. After culturing, PBMCs were harvested and analyzed by flow cytometry. In order to prevent non-specific reactions, PBS supplemented with 10% inactivated goat serum (Thermo Fisher Scientific) was added to each well at 100 μl/well, and left stationary at room temperature for 15 min. After washing, Alexa Fluor 647-labeled anti-CD4 monoclonal antibody (CC30; Bio-Rad), peridinin-chlorophyll-protein complex/cyanin 5.5 (PerCp/Cy 5.5)-labeled anti-CD8 monoclonal antibody (CC63; Bio-Rad) and phycoerythrin/cyanin 7 (PE/Cy7)-labeled anti-IgM monoclonal antibody (IL-A30; Bio-Rad) were reacted at room temperature for 20 min. The anti-CD4 monoclonal antibody (CC30) was labeled with Alexa Fluor 647 using Zenon Mouse IgG1 labeling Kits (Thermo Fisher Scientific). The anti-CD8 monoclonal antibody (CC63) and the anti-IgM monoclonal antibody (IL-A30) were labeled with PerCp/Cy5.5 and PE/Cy7, respectively, using Lightning-Link Conjugation Kit (Innova Biosciences). After reaction, washing was performed twice. Then, cell proliferation was analyzed with FACS Verse (BD Biosciences) and FCS Express 4 (De Novo Software). For every washing operation and dilution of antibodies, PBS supplemented with 1% bovine serum albumin (Sigma Aldrich) was used.


(2) Changes in Cytokine Production Induced by PGE2

PBMCs derived from uninfected cattle were seeded in 96-well plates at 4×105 cells/well and cultured in the same manner as described in (1) above for 3 days (Note: analysis of TNF-α production was performed only for the cells cultured under stimulation with 2,500 nM PGE2). After 3 days, the culture supernatant was collected. IFN-γ production was measured with ELISA for Bovine IFN-γ (MABTECH), and TNF-α production was measured with Bovine TNF alpha Do-It-Yourself ELISA (Kingfisher Biotech). For the measurement, absorbance at 450 nm was measured using a microplate reader MTP-900 (Corona Electric).


Experimental results of (1) and (2) above are shown in FIG. 23. In groups where PGE2 was added at 25 nM, 250 nM and 2,500 nM, proliferation of CD4+ cells and CD8+ cells was significantly inhibited (FIGS. 23a and b). Likewise, IFN-γ production was significantly inhibited in groups where PGE2 was added at 25 nM, 250 nM and 2,500 nM (FIG. 23c). Further, in the group where PGE2 was added at 2,500 nM, TNF-α production was also significantly inhibited (FIG. 23d). These results demonstrated that PGE2 has immunosuppressive effects also in cattle.


(3) Changes in mRNA Expression Levels of Cytokines, etc. Induced by PGE2


PBMCs derived from uninfected cattle were seeded in 96-well plates at 1×106 cells/well and cultured for 3 days in the presence of 2,500 nM PGE2 or DMSO. Total cellular RNA was extracted from the thus cultured PBMCs using TRI reagent (Molecular Research Center), and cDNA was synthesized with PrimeScript Reverse Transcriptase (TaKaRa) and Oligo-dT primers. Using the synthesized cDNA as a template, real-time PCR was performed with LightCycler480 System II (Roche) in a 10 μl reaction solution containing SYBR Premix DimerEraser (TaKaRa) and 3 pmol each of the primers specific to individual genes. Then, changes in expression levels of individual genes were observed.











Primer (boIL2 F):)



(SEQ ID NO: 119)



TTT TAC GTG CCC AAG GTT AA 






Primer (boIL2 R):  



(SEQ ID NO: 120)



CGT TTA CTG TTG CAT CAT CA






Primer (boIL10 F):  



(SEQ ID NO: 121)



TGC TGG ATG ACT TTA AGG G






Primer (boIL10 R): 



(SEQ ID NO: 122)



AGG GCA GAA AGC GAT GAC A 






Primer (boIFNγ F):  



(SEQ ID NO: 123)



ATA ACC AGG TCA TTC AAA GG






Primer (boIFNγ R):



(SEQ ID NO: 124)



ATT CTG ACT TCT CTT CCG CT






Primer (boTNFα F):  



(SEQ ID NO: 125)



TAA CAA GCC AGT AGC CCA CG






Primer (boTNFα R):



(SEQ ID NO: 126)



GCA AGG GCT CTT GAT GGC AGA






Primer (boTGFβ1 F):  



(SEQ ID NO: 127)



CTG CTG AGG CTC AAG TTA AAA GTG






Primer (boTGFβ1 R):  



(SEQ ID NO: 128)



CAG CCG GTT GCT GAG GTA G






Primer (boFoxp3 F):  



(SEQ ID NO: 129)



CAC AAC CTG AGC CTG CAC AA






Primer (boFoxp3 R):  



(SEQ ID NO: 130)



TCT TGC GGA ACT CAA ACT CAT C






Primer (boSTAT3 F):  



(SEQ ID NO: 131)



ATG GAA ACA ACC AGT CGG TGA






Primer (boSTAT3 R):  



(SEQ ID NO: 132)



TTT CTG CAC ATA CTC CAT CGC T






Primer (boACTB F):  



(SEQ ID NO: 133)



TCT TCC AGC CTT CCT TCC TG






Primer (boACTB R):  



(SEQ ID NO: 134)



ACC GTG TTG GCG TAG AGG TC






Primer (boGAPDH F):  



(SEQ ID NO: 135)



GGC GTG AAC CAC GAG AAG TAT AA






Primer (boGAPDH R): 



(SEQ ID NO: 136



CCC TCC ACG ATG CCA AAG T







Reaction conditions of the real-time PCR were as described below.
    • Thermal denaturation 95° C. for 5 sec (30 sec only for the first cycle)
    • Annealing 60° C. for 30 sec
    • Extension 72° C. for 30 sec


      After 45 cycles of thermal denaturation, annealing and extension, the temperature was raised from 65° C. to 95° C. at 0.1° C./see for melting curve analysis. The melting temperatures of amplified products were measured to confirm specificity. For each sample, expression levels of genes ACTB and GAPDH were quantified as internal standards.


Experimental results of (3) are shown in FIG. 24. Addition of PGE2 significantly decreased the expression levels of IFNγ, IL-2 and TNFα in PBMCs. On the other hand, PGE2 significantly increased the expression levels of IL-10, STAT3, Foxp3 and TGFβ1 in PBMCs.


(4) Changes in PD-L1 Expression Induced by PGE2

PBMCs derived from uninfected cattle were seeded in 96-well plates at 1×106 cells/well and cultured for 24 hours under the same conditions as described in (1) above. Total cellular RNA was extracted from the cultured PBMCs, and cDNA was synthesized in the same manner as described in (3) above. Then, real-time PCR was performed using PDL1 specific primers. Primer (boPDL1 F): GGG GGT TTA CTG TTG CTT GA (SEQ ID NO: 137) Primer (boPDL1 R): GCC ACT CAG GAC TTG GTG AT (SEQ ID NO: 138) Further, expression of PD-L1 protein in the cultured PBMCs was analyzed by flow cytometry. Briefly, PBS supplemented with 10% inactivated goat serum (Thermo Fisher Scientific) was added to harvested PBMCs at 100 μl/well and left stationary at room temperature for 15 min. After washing, rat anti-bovine PD-L1 antibody (4G12; Rat IgG2a; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561) or rat IgG2a isotype control (BD Bioscience) was added and reaction was conducted at room temperature for 20 min. After washing twice, allophycocyanin (APC)-labeled anti-rat Ig antibody (Southern Biotech) was added and reaction was conducted at room temperature for 20 min. After washing twice, expression of PD-L1 protein was analyzed with FACS Verse (BD Biosciences) and FCS Express 4 (De Novo Software). For every washing operation and dilution of antibodies, PBS supplemented with 1% bovine serum albumin (Sigma Aldrich) was used.


Experimental results of (3) are shown in FIG. 25. Expressions of PD-L1 mRNA (FIG. 25a) and PD-L1 protein (FIG. 25b) were significantly increased in PBMCs derived from the uninfected cattle that were cultured in the presence of added PGE2. These results show a possibility that PGE2 affects PD-L1 expression also in cattle.


2.2. Examination of Immunostimulatory Effects of COX-2 Inhibitor in Cattle PBMCs

In order to examine immunostimulatory effects of COX-2 inhibitor in cattle, a COX-2 inhibitor meloxicam was added to a PBMC culture test under stimulation with anti-CD3 monoclonal antibody and anti-CD28 monoclonal antibody, followed by evaluation of the proliferation capacity and cytokine production capacity of PBMCs derived from uninfected cattle.


PBMCs derived from uninfected cattle were seeded in 96-well plates at 4×105 cells/well and cultured for 3 days in the presence of 1,000 nM meloxicam (Sigma-Aldrich) or DMSO as a negative control. As stimulants for T cells, 1 μg/ml of anti-CD3 monoclonal antibody (MM1A; Washington State University Monoclonal Antibody Center) and 1 μg/ml of anti-CD28 monoclonal antibody (CC220; Bio-Rad) were added. After 3 days, cell proliferation capacity and cytokine production were evaluated in the same manner as described in (1) and (2) in section 2.1 above.


Experimental results are shown in FIG. 26. In the meloxicam-added group, proliferation rate of CD8+ cells was increased significantly (FIG. 26a), and so were the production of IFN-γ and TNF-α (FIGS. 26b and 26c). These results demonstrated that COX-2 inhibitor has immunostimulatory effects also in cattle.


2.3. Kinetic Analysis of PGE2 in Cattle Infected with M. avium Subsp. Paratuberculosis


In order to elucidate the relation between bovine chronic infections and PGE2, the present inventors performed kinetic analysis of PGE2 in cattle infected with M. avium subsp. paratuberculosis.


(1) Measurement of Serum PGE2

First, PGE2 contained in serum derived from cattle that developed Johne's disease from natural infection and PGE2 contained in serum derived from uninfected cattle were quantified by ELISA. Briefly, the amount of PGE2 contained in serum derived from cattle that naturally developed Johne's disease (kindly provided by Dr. Yasuyuki Mori, National Institute of Animal Health, National Agriculture and Food Research Organization) was measured with Prostaglandin E2 Express ELISA Kit (Cayman Chemical). For the measurement, absorbance at 450 nm was measured with a microplate reader MTP-900 (Corona Electric).


Experimental results of (1) are shown in FIG. 27a. Compared to uninfected cattle, the cattle manifesting Johne's disease showed a significant increase in serum PGE2.


(2) Changes in PGE2 Production by M. avium subsp. paratuberculosis Antigen Stimulation


In order to confirm that PGE2 production is promoted by M. avium subsp. paratuberculosis antigen, PBMCs derived from cattle experimentally infected with M. avium subsp. paratuberculosis and those derived from uninfected cattle were cultured with M. avium subsp. paratuberculosis antigen, and PGE2 in culture supernatants was quantified by ELISA. Briefly, PBMCs derived from experimentally infected cattle and those from uninfected cattle were seeded in 96-well plates at 4×105 cells/well and cultured for 5 days in the presence of 1 μg/ml of M. avium subsp. paratuberculosis antigen. As the M. avium subsp. paratuberculosis antigen, Johnin Purified Protein Derivative (J-PPD) was used. Further, in order to confirm that PGE2 production by antigen stimulation is inhibited by COX-2 inhibitor, 1 μg/ml of J-PPD and 1000 nM meloxicam (Signa-Aldrich) were added to the medium. After 5 days, the culture supernatant was collected, and PGE2 contained therein was quantified with Prostaglandin E2 Express ELISA Kit (Cayman Chemical).


Experimental results of (2) are shown in FIGS. 27b and c. Addition of J-PPD significantly promoted PGE2 production from PBMCs in experimentally infected cattle (FIG. 27c). On the other hand, no significant difference was observed in uninfected cattle (FIG. 27b). It has been demonstrated that J-PPD-promoted PGE2 production from experimentally infected cattle is a specific response to M. avium subsp. paratuberculosis. Further, PGE2 production was inhibited significantly by culture with a COX-2 inhibitor added under the above-described conditions (FIG. 27c).


(3) Changes in COX2 Expression by J-PPD Stimulation

PBMCs derived from cattle experimentally infected with M. avium subsp. paratuberculosis were seeded in 96-well plates at 1×106 cells/well and cultured in the presence of J-PPD for 24 hours. After culturing, PBMCs were harvested and total cellular RNA was extracted as described above. Then, cDNA was synthesized. Using the synthesized cDNA as a template, real-time PCR was performed with COX2 specific primers in the same manner as described above.











Primer (boCOX2 F):



(SEQ ID NO: 139)



ACG TTT TCT CGT GAA GCC CT






Primer (boCOX2 R): 



(SEQ ID NO: 140)



TCT ACC AGA AGG GCG GGA TA






Experimental results of (3) are shown in FIG. 27d. COX2 expression was increased significantly by J-PPD stimulation in cattle experimentally infected with M. avium subsp. paratuberculosis. These results suggested that COX2 expression is increased by J-PPD stimulation in cattle experimentally infected with M. avium subsp. paratuberculosis and that this increase results in promoted PGE2 production.


2.4. Changes in PD-L1 Expression by J-PPD Stimulation

Effects of J-PPD stimulation on PD-L1 expression in cattle infected with M. avium subsp. paratuberculosis were evaluated. PBMCs derived from cattle experimentally infected with M. avium subsp. paratuberculosis and those derived from uninfected cattle were seeded in 96-well plates at 1×106 cells/well and cultured for 24 hours in the presence of J-PPD. Cultured PBMCs were harvested, and then PD-L1 expression on lymphocytes, CD4+ T cells, CD8+ T cells, IgM+ cells and CD14+ cells was analyzed by flow cytometry. Briefly, PBS supplemented with 10% inactivated goat serum (Thermo Fisher Scientific) was added to each well in a volume of 100 μl and cells were left stationary at room temperature for 15 min. After washing, rat anti-bovine PD-L1 antibody (4G12; Rat IgG2a; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561) or rat IgG2a isotype control (BD Bioscience) was added and reaction was conducted at room temperature for 20 min. After washing twice, secondary antibodies were added and reaction was conducted at room temperature for 20 min. As secondary antibodies, phycoerythrin (PE)-labeled anti-CD3 monoclonal antibody (MM1A; Washington State University Monoclonal Antibody Center), fluorescein isothiocyanate (FITC)-labeled anti-CD4 monoclonal antibody (CC8; Bio-Rad), PerCp/Cy 5.5-labeled anti-CD8 monoclonal antibody (CC63; Bio-Rad), PE/Cy7-labeled anti-IgM monoclonal antibody (IL-A30; Bio-Rad) and APC-labeled anti-rat Ig antibody (Southern Biotech) were used for analysis of PD-L1 expression on T cells and IgM+ cells. Anti-CD3 monoclonal antibody (MM1A) was labeled with PE using Zenon Mouse IgG1 labeling Kit. For analysis of PD-L1 expression on CD14+ cells, PerCp/Cy5.5-labeld anti-CD14 monoclonal antibody (CAM36A; Washington State University Monoclonal Antibody Center) and APC-labeled anti-rat Ig antibody (Southern Biotech) were used. Anti-CD14 monoclonal antibody (CAM36A) was labeled with PerCp/Cy5.5 using Lightning-Link Conjugation Kit. After reaction, washing was conducted twice. Then, PD-L1 expression was analyzed with FACS Verse (BD Biosciences) and FCS Express 4 (De Novo Software). For every washing operation and dilution of antibodies, PBS supplemented with 1% bovine serum albumin (Sigma Aldrich) was used.


Experimental results are shown in FIG. 28. It was shown that PD-L1 expression rate is significantly increased in J-PPD-added groups of cattle experimentally infected with M. avium subsp. paratuberculosis, as compared to uninfected cattle (FIG. 28a). PD-L1 expression rates were also increased in CD4+ T cells, CD8+ T cells, IgM+ B cells and CD14+ cells in cattle infected with M. avium subsp. paratuberculosis (FIG. 28b-e).


2.5. Expression Analyses of PGE2, EP2 and PD-L1 in Johne's Disease Lesions

Subsequently, the present inventors performed expression analyses of PGE2, EP2 and PD-L1 in Johne's disease lesions by immunohistochemical staining. Briefly, ilium tissue blocks from cattle which naturally developed Johne's disease (#1, presenting clinical symptoms of Johne's disease such as diarrhea and severe emaciation), cattle experimentally infected with M. avium subsp. paratuberculosis (#65, clinical symptoms such as shedding of M. avium subsp. paratuberculosis and diarrhea were observed; Okagawa T, Konnai S, Nishimori A, Ikebuchi R, Mizorogi S, Nagata R, Kawaji S, Tanaka S, KagawaY, Murata S, Mori Y and Ohashi K., Infect Immun, 84:77-89, 2016) and uninfected control cattle (C#6) (those blocks were kindly provided by Dr. Yasuyuki Mori, National Institute of Animal Health, National Agriculture and Food Research Organization) were used for immunohistochemical staining. Samples fixed with 4% paraformaldehyde [paraformaldehyde 20 g, PBS (pH 7.4) 500 ml] and embedded in paraffin were sliced into 4 mm thick sections with a microtome, attached to and dried on silane-coated slide glass (Matsunami Glass) and deparaffinized with xylene/alcohol. While the resultant sections were soaked in citrate buffer (citric acid 0.37 g, trisodium citrate dihydrate 2.4 g, distilled water 1000 ml), antigen retrieval treatment was performed for 10 min with microwave, followed by staining using a Nichirei automatic immuno-staining device. As pretreatment, sample sections were soaked in 0.3% hydrogen peroxide-containing methanol solution at room temperature for 15 min and washed with PBS. Then, anti-PGE2-polyclonal antibody (Abcam), anti-EP2 monoclonal antibody (EPR8030(B); Abcam) or rat anti-bovine PD-L1 monoclonal antibody (6C11-3A11; Rat IgG2a; Japanese Patent Application No. 2017-61389, Konnai S, Ohashi K, Murata S, Okagawa T, Nishimori A, Maekawa N, Takagi S, Kagawa Y, Suzuki S, Nakajima C, titled “Anti-PD-L1 Antibody for Detecting PD-L1”) was added and reaction was conducted at room temperature for 30 min. After washing with PBS, histofine simple stain MAX-PO (Nichirei Bioscience) was added and reaction was carried out at room temperature for 30 min, followed by coloring with 3,3′-diaminobenzidine tetrahydrocholride and observation with a light microscope.


Experimental results are shown in FIG. 29. In ileal lesions of cattle (#1 cattle naturally developing johne's disease and #65 experimentally infected cattle) where M. avium subsp. paratuberculosis was confirmed by Ziehl-Neelsen staining, PGE2, EP2 and PD-L1 were expressed strongly (FIG. 29a-d). On the other hand, in the ileum of uninfected cattle (C#6), the expression of EP2 was confirmed but PGE2 and PD-L1 were hardly expressed (FIG. 29a-d). These results indicated a possibility that PGE2 production and PD-L1 expression are enhanced in Johne's disease lesions.


2.6. Examination of Stimulatory Effects of COX-2 Inhibitor on M. avium subsp. paratuberculosis-Specific Immune Responses


In order to confirm that COX-2 inhibitor has stimulatory effects on M. avium subsp. paratuberculosis-specific immune responses, the present inventors cultured PBMCs derived from cattle experimentally infected with M. avium subsp. paratuberculosis in the presence of added meloxicam and J-PPD and evaluated their proliferation capacity and cytokine production capacity. Briefly, PBMCs derived from cattle experimentally infected with M. avium subsp. paratuberculosis were seeded in 96-well plates at 4×105 cells/well and cultured for 5 days under stimulation in the presence of 1 μg/ml of J-PPD and 1000 nM meloxicam (Sigma-Aldrich). After culturing, cell proliferation capacity and cytokine production capacity were evaluated in the same manner as described above.


Experimental results are shown in FIG. 30. In cattle experimentally infected with M. avium subsp. paratuberculosis, a significant increase was observed in proliferation rate of CD8+ cells (FIG. 30a), IFN-γ production (FIG. 30b) and TNF-α production (FIG. 30c). These results demonstrated that COX-2 inhibitor has stimulatory effects on M. avium subsp. paratuberculosis-specific immune responses.


2.7. Examination of Immunostimulatory Effects of Rat Anti-Bovine PD-L1 Antibody in M avium subsp. paratuberculosis-Infected Cattle


In order to confirm that rat anti-bovine PD-L1 antibody also has immunostimulatory effects in M. avium subsp. paratuberculosis-infected cattle, the present inventors performed a PBMC culture test under stimulation in the presence of rat anti-bovine PD-L1 antibody and evaluated J-PPD-specific T-cell responses. Briefly, PBMCs derived from cattle experimentally infected with M. avium subsp. paratuberculosis were seeded in 96-well plates at 4×105 cells/well and cultured for 5 days under stimulation with 1 μg/ml of J-PPD. At the time of this stimulation culture, 1 μg/ml of rat anti-bovine PD-L1 antibody (4G12; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561) as a blocking antibody or the same amount of a rat serum-derived IgG (Sigma-Aldrich) as a negative control was added. After culturing, cell proliferation capacity and cytokine production were evaluated in the same manner as described above.


Experimental results are shown in FIG. 31. In the cattle experimentally infected with M. avium subsp. paratuberculosis, a significant increase was observed in the proliferation rate of CD8+ cells (FIG. 30a), IFN-γ production (FIG. 30b) and TNF-α production (FIG. 30c) as a result of the addition of rat anti-bovine PD-L1 antibody. These results indicated that PD-1/PD-L1 blockade has stimulatory effects on J-PPD-specific T-cell responses.


2.8. Examination of Combined Effects of COX-2 Inhibitor and Rat Anti-Bovine PD-L1 Antibody on Immunostimulation

Subsequently, the present inventors examined combined effects of COX-2 inhibitor and rat anti-bovine PD-L1 antibody on immunostimulation in cattle experimentally infected with M. avium subsp. paratuberculosis. Briefly, PBMCs derived from cattle experimentally infected with M. avium subsp. paratuberculosis were seeded in 96-well plated at 4×105 cells/well and cultured in the presence of J-PPD or a negative control antigen for 5 days. As the negative control antigen, Mycobacterium bovis BCG strain-derived purified protein (B-PPD) was used. To the medium, 1,000 nM meloxicam (Sigma-Aldrich) and 1 μg/ml of rat anti-bovine PD-L1 antibody (4G12; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561) were added to make a total volume 200 μl. As a negative control for meloxicam, DMSO was used. As a negative control antibody, rat serum-derived IgG (Sigma-Aldrich) was used. After culturing, cell proliferation capacity and cytokine production were evaluated in the same manner as described above.


Experimental results are shown in FIG. 32. The proliferation rate of CD8+ cells was increased significantly in the groups where meloxicam and rat anti-bovine PD-L1 antibody had been added, as compared to the negative control groups (FIG. 32a). Since no such change was observed in the groups stimulated with the negative control antigen, a possibility was shown that combined use of COX-2 inhibitor and anti-bovine PD-L1 monoclonal antibody stimulates J-PPD-specific CD8+ cell responses (FIG. 32a). With respect to IFN-γ production, no significant change was observed whether J-PPD stimulation or negative control antigen stimulation was applied (FIG. 32b). These results showed a possibility that combined use of COX-2 inhibitor and rat anti-bovine PD-L1 antibody will produce a larger immunostimulatory effect in M. avium subsp. paratuberculosis-infected cattle than when the individual agents are used as single dosages.


2.9. Examination of Combined Effects of COX-2 Inhibitor and Rat-Bovine Chimeric Anti-PD-L1 Antibody on Immunostimulation

Finally, the present inventors examined combined effects of COX-2 inhibitor and rat-bovine chimeric anti-PD-L1 antibody on immunostimulation in cattle experimentally infected with M. avium subsp. paratuberculosis. Briefly, PBMCs derived from cattle experimentally infected with M. avium subsp. paratuberculosis were seeded in 96-well plated at 4×105 cells/well and cultured in the presence of J-PPD or a negative control antigen for 5 days. As the negative control antigen, B-PPD was used. To the medium, 1,000 nM meloxicam (Sigma-Aldrich) and 1 μg/ml of rat-bovine chimeric anti-PD-L1 antibody (ch4G12; Japanese Patent Application No. 2016-159089, Konnai S, Ohashi K, Murata S, Okagawa T, Nishimori A, Maekawa N, Suzuki S, Nakajima C; Anti-PD-L1 Antibody for Cattle) were added to make a total volume 200 μl. As a negative control for meloxicam, DMSO was used. As a negative control antibody, bovine serum-derived IgG (Sigma-Aldrich) was used. After culturing, cell proliferation capacity and cytokine production were evaluated in the same manner as described above.


Experimental results are shown in FIG. 33. As a result of evaluation of combined effects m M. avium subsp. paratuberculosis-infected cattle, a possibility was shown that combined use of COX-2inhibitor and rat-bovine chimeric anti-PD-L1 antibody stimulates J-PPD-specific CD8+ cell responses (FIG. 33a) as in the case of combined use with rat anti-bovine PD-L1 antibody. With respect to IFN-γ production, no significant change was observed whether J-PPD stimulation or negative control antigen stimulation was applied (FIG. 33b). From these results, it is understood that immunostimulatory effects by combined use of COX-2 inhibitor and PD-1/PD-L1 inhibitor were shown even when rat-bovine chimeric anti-PD-L1 antibody was used in M. avium subsp. paratuberculosis-infected cattle.


Example 3
Examination of Combined Effects of Anti-Bovine PD-L1 Antibody and COX-2 Inhibitor in Bovine Leukemia Virus-Infected Cattle
1. Introduction

The interaction between PD-1 and PD-L1 is one of the major molecular mechanisms through which pathogens evade immune responses. It has been reported that inhibition of the above interaction by using an antibody which specifically binds to either of those molecules can produce anti-pathogenic effects. In the subject Example, toward establishment of a novel control method against bovine leukemia virus (BLV) infection, the present inventors have confirmed in in vitro tests an immunostimulatory effect induced by a COX-2 inhibitor and enhancement of that effect when the inhibitor is used in combination with anti-bovine PD-L1 antibody.


2. Materials and Methods, as well as Experimental Results


2.1. Kinetic Analysis of PGE2 in BLV-Infected Cattle

In order to elucidate the involvement of PGE2 in the progression of pathology in BLV infection as a bovine chronic viral infection, the present inventors performed kinetic analysis of PGE2 in BLV-infected cattle.


(1) Measurement of Plasma PGE2 and Analysis of Correlation with Other Indicators


First, the amount of PGE2 contained in the plasma of BLV-infected cattle was quantified with Prostaglandin E2 Express ELISA Kit (Cayman Chemical). For the measurement, absorbance at 450 nm was measured using a microplate reader MTP-900 (Corona Electric). Further, correlation between the amount of plasma PGE2 and the number of lymphocytes in peripheral blood or PD-L1 expression rate in IgM+ cells was examined. Briefly, PBMCs isolated from BLV-infected cattle were analyzed by flow cytometry to quantify the PD-L1 expression on IgM+ cells. First, in order to block non-specific reactions of antibody, PBS supplemented with 10% inactivated goat serum (Thermo Fisher Scientific) was added to each well in an amount of 100 μl and left stationary at room temperature for 15 min. After washing, rat anti-bovine PD-L1 antibody (4G12; Rat IgG2a; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561) or rat IgG2a isotype control (BD Bioscience) was added and reaction was conducted at room temperature for 20 min. After washing twice, PE/Cy7-labeled anti-IgM monoclonal antibody (IL-A30; Bio-Rad) and APC-labeled anti-rat Ig antibody (Southern Biotech) were added and reaction was conducted at room temperature for 20 min. Anti-IgM monoclonal antibody (IL-A30) was labeled with PE/Cy7 using Lightning-Link Conjugation Kit. After the reaction, washing was performed twice. Then, cells were analyzed with FACS Verse (BD Biosciences) and FCS Express 4 (De Novo Software). For every washing operation and dilution of antibodies, PBS supplemented with 1% bovine serum albumin (Sigma Aldrich) was used.


Experimental results of (1) are shown in FIG. 34. As the disease stage of BLV infection progressed (AL: aleukemic, asymptomatic; PL: persistent lymphocytosis), plasma PGE2 increased significantly (FIG. 34a). As a result of examination of correlation between the number of lymphocytes in peripheral blood (an indicator of the disease progression in BLV infection) and plasma PGE2, a positive correlation was observed (FIG. 34b). Further, as a result of examination of correlation between plasma PGE2 and PD-L1 expression rate in IgM+ cells, a positive correlation was shown (FIG. 34c). These results suggested that PGE2 is involved in the disease progression in BLV infection and the resultant immunosuppression.


(2) Expression Analysis of COX2 and EP4 in BLV-Infected Cattle

For more detailed analysis, in addition to plasma PGE2, expression levels of COX2 (i.e., involved in PGE2 synthesis) and the gene of EP4 (a PGE2 receptor that transmits immunosuppressive signals) were quantified by real-time PCR. Briefly, total cellular RNA was extracted from PBMCs, CD4+ cells, CD8+ cells, CD14+ cells and CD21+ cells derived from BLV-infected cattle and uninfected cattle in the same manner as described in (3), section 2.1 of Example 2, and cDNA was synthesized. Using the synthesized cDNA as a template, real-time PCR was performed with COX2-specific primers (already described in (3), section 2.3 of Example 2) and EP4-specific primers in the same manner as described in Example 2.











Primer (boEP4 F):



(SEQ ID NO: 141)



GTG ACC ATC GCC ACC TAC TT






Primer (boEP4 R): 



(SEQ ID NO: 142)



CTC ATC GCA CSG ATG ATG CT






Experimental results of (2) are shown in FIG. 35. It was confirmed that EP4 expression level increased in cattle with PL (an advanced stage of the disease) (hereinafter, referred to as “PL cattle”) (FIG. 35a). The same is true for COX2 expression levels, which also increased in PL cattle (FIG. 35b). In order to examine PGE2 producing cells, COX2 expression in CD4+, CD8+, CD14 and CD21+ cells was quantified. As it turned out, COX2 expression clearly increased in CD4+, CD8+ and CD21+ cells in PL cattle (FIG. 35c-e). With respect to CD14 cells, evaluation using samples from PL cattle is yet to be performed, but COX2 expression showed a tendency to increase in AL cattle compared to uninfected cattle (FIG. 35f). These results showed that COX2 expression increases in various cell groups as the disease stage of BLV infection progresses.


(3) Changes in PGE2 Production by BLV Antigen Stimulation

It has been reported that COX2 expression is increased by antigen stimulation in BLV infection (Pyeon D, Diaz F J, Splitter G A. J Virol. 74:5740-5745, 2000). From this report, it is predicted that PGE2 production by PBMCs derived from BLV-infected cattle will also be promoted by antigen stimulation. To verify this hypothesis, the present inventors cultured PBMCs with BLV antigen and quantified PGE2 in the culture supernatant by ELISA. Briefly, PBMCs derived from BLV-infected cattle and those derived from uninfected cattle were seeded in 96-wel plates at 4×105 cells/well and cultured in the presence of BLV antigen (final concentration 2%) for 6 days. As the BLV antigen, a culture supernatant of fetal lamb kidney cells persistently infected with BLV (FLK-BLV) was used after heat treatment at 65° C. In order to confirm that PGE2 production by antigen stimulation is inhibited by COX-2 inhibitor, cells were also cultured under such conditions that both BLV antigen and 1,000 nM meloxicam (Sigma Aldrich) were added to the medium. After 6 days, culture supernatant was collected and PGE2 contained in it was quantified with Prostaglandin E2 Express ELISA Kit (Cayman Chemical).


Experimental results of (3) are shown in FIG. 36. In BLV-infected cattle (AL: FIG. 36b; PL: FIG. 36c), PGE2 production from PBMCs was shown to be significantly promoted by addition of BLV antigen (FIG. 36b, c). No significant differences were observed in uninfected cattle (FIG. 36a). Thus, it has been demonstrated that the induction of PGE2 production stimulated by the BLV antigen in PBMCs derived from BLV-infected cattle is a response specific to BLV. Further, it was confirmed that PGE2 production is significantly inhibited by culture in the presence of an added COX-2 inhibitor under the above-described conditions (FIG. 36b, c).


(4) Effect of PGE2 on BLV Provirus Load

In various chronic infections, a possibility has been suggested that PGE2 promotes viral replication (Pyeon D, Diaz F J, Splitter G A. J Virol. 74:5740-5745, 2000; Waris D, Siddiqui A. J Virol. 79:9725-9734, 2005). Then, in order to evaluate the effect of PGE2 on viral replication in BLV infection, the present inventors cultured PBMCs with PGE2 and quantified BLV provirus load by real-time PCR. Briefly, PBMCs derived from BLV-infected cattle were seeded in 96-well plates at 1×106 cells/well and cultured in the presence of 2,500 nM PGE2 or DMSO for 3 days. After culturing, DNA was extracted from harvested PBMCs with Wizard DNA Purification kit (Promega). The concentration of the extracted DNA was quantified by measuring the absorbance (260 nm) with Nanodrop 8000 Spectrophotometer (Thermo Fisher Scientific). For measuring BLV provirus load in PBMCs, real-time PCR was performed using Cycleave PCR Reaction Mix SP (TaKaRa) and Probe/Primer/Positive control for detecting bovine leukemia virus (TaKaRa). LightCycler480 System II (Roche Diagnosis) was used for measurement.


Experimental results of (4) are shown in FIG. 37. Provirus loads were shown to increase significantly in PGE2-treated group (FIG. 37), suggesting a possibility that PGE2 promotes BLV replication.


2.2. Changes in PD-L1 Expression by BLV Antigen Stimulation

Effects of BLV antigen stimulation on PD-L1 expression in BLV-infected cattle were evaluated. Briefly, PBMCs derived from BLV-infected and those from uninfected cattle were seeded in 96-well plates at 1×106 cells/well and cultured in the presence of BLV antigen (final concentration 2%) for 24 hours. After culturing, PBMCs were harvested, and PD-L1 expression on lymphocytes, CD4+ T cells, CD8+ T cells, IgM+ cells and CD14+ cells was analyzed by flow cytometry in the same manner as described in section 2.4 of Example 2.


Experimental results of 2.2 are shown in FIG. 38. PD-L1 expression was shown to increase significantly in lymphocytes when PBMCs from BLV-infected cattle were stimulated with BLV antigen (FIG. 38a). Further, changes in PD-L1 expression in individual cell groups (CD4+ T cells, CD8+ T cells, IgM+ cells and CD14+ cells) were analyzed to reveal that PD-L1 expression was increased in CD4+ cells and CD8+ cells by BLV antigen stimulation (FIG. 38b-e).


2.3. Examination of Stimulatory Effects of COX-2 Inhibitor on BLV-Specific Immune Responses

In order to confirm that COX-2 inhibitor has stimulatory effects on BLV antigen-specific immune responses, the present inventors evaluated the proliferation capacity and cytokine production capacity of PBMCs that were cultured in the presence of meloxicam and BLV antigen. Briefly, PBMCs derived from BLV-infected cattle were seeded in 96-well plated at 4×105 cells/well and cultured under stimulation in the presence of BLV antigen (final concentration 2%) and 1,000 nM meloxicam (Sigma-Aldrich) for 6 days. After culturing, cell proliferation capacity and cytokine production capacity were evaluated in the same manner as described in Example 2.


Experimental results are shown in FIG. 39. In the cattle experimentally infected with BLV, a significant increase was observed in proliferation rate of CD4+ cells (FIG. 39a), proliferation rate of CD8+ cells (FIG. 39b), IFN-γ production (FIG. 39c) and TNF-α production due to the addition of meloxicam. These results indicated that COX-2 inhibitor has stimulatory effects on BLV antigen-specific T cell responses.


2.3. Examination of Antiviral Effects of COX-2 Inhibitor in BLV-Infected Cattle

In order to examine the antiviral effects of COX-2 inhibitor in vivo, the present inventors conducted a clinical application test using BLV-infected cattle. Two individuals (#1 and #2) of PL cattle of Holstein species were used in the test. The body weight and age at the beginning of the test were 736 kg and 8 years and 1 month for #1 and 749 kg and 3 years and 7 months for #2. As a COX-2 inhibitor, Metacam™ 2% injection (hereinafter, referred to as “Metacam™”; Kyoritsu Seiyaku) was inoculated subcutaneously at 0.5 mg/kg. In addition to the first inoculation, individual #1 received inoculation 7, 14, 21, 28, 35, 42, 49 and 56 days after the first inoculation; and individual #2 received inoculation 7, 14, 20, 27, 34, 41, 48 and 55 days after the first inoculation (FIG. 40a, b). Blood collection was performed on each inoculation day, and 1 day and 84 days after the first inoculation for individual #1; and for individual #2, each inoculation day, the day after each inoculation, and 3 days and 84 days after the first inoculation (FIG. 40a, b). Blood collection on each inoculation day was conducted before Metacam™ inoculation. Using the collected blood samples, BLV provirus loads, serum PGE2 concentrations and IFN-γ concentrations were quantified. Provirus loads were quantified in the same manner as described in (4), section 2.1 above. Serum PGE2 concentrations and IFN-γ concentrations were measured with Prostaglandin E2 Express ELISA Kit (Cayman Chemical) and ELISA for Bovine IFN-γ (MABTECH), respectively.


Experimental results are shown in FIG. 40. As a result of Metacam™ administration, BLV provirus load decreased significantly in both #1 and #2 (FIG. 40c, d). Serum PGE2 concentration decreased on the day after Metacam™ administration, and provirus load also decreased on the day after Metacam™ administration (FIG. 40c, d). Further, in #2, serum IFN-γ concentration increased on the day after Metacam™ administration (FIG. 40e). In #1, serum IFN-γ concentration was below the measurement limit of ELISA. These results indicated that COX-2 inhibitor has antiviral effects in BLV-infected cattle in vivo.


2.4. Examination of Immunostimulatory Effects Due to Combined Use of COX-2 Inhibitor and Rat Anti-Bovine PD-L1 Antibody

Provirus loads in BLV-infected cattle decreased upon administration of a COX-2 inhibitor (FIG. 40c, d). In order to obtain stronger antiviral effects, the present inventors examined immunostimulatory effects of combined use of COX-2 inhibitor and anti-bovine PD-L1 antibody in BLV-infected cattle. Briefly, PBMCs derived from BLV-infected cattle were seeded in 96-well plates at 4×105 cells/well and cultured in the presence of BLV antigen or a negative control antigen for 6 days. As the negative control antigen, a culture supernatant of BLV-uninfected fetal lamb kidney cells (FLK) was used after heat treatment at 65° C. To the medium, 1,000 nM meloxicam (Sigma-Aldrich) and 1 μg/ml of rat anti-bovine PD-L1 antibody (4G12; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561) were added to make a total volume 200 μl. As a negative control for meloxicam, DMSO was used; and as a negative control antibody, rat serum derived IgG (Sigma-Aldrich) was used. After culturing, cell proliferation capacity and cytokine production capacity were evaluated in the same manner as described above.


Experimental results are shown in FIG. 41. When PBMCs were stimulated with BLV antigen, the group in which both meloxicam and rat anti-bovine PD-L1 antibody were added showed significant increases in proliferation rate of CD4+ cells (FIG. 41a), proliferation rate of CD8+ cells (FIG. 41b) and IFN-γ production (FIG. 41c), as compared to the negative control group, the meloxicam alone group and the rat anti-bovine PD-L1 antibody alone group. No such changes were observed when PBMCs were stimulated with the negative control antigen. Therefore, it was suggested that BLV antigen-specific T cell responses are activated by combined use of COX-2 inhibitor and rat anti-bovine PD-L1 antibody (FIG. 41a-c). From these results, a possibility was shown that a greater immunostimulatory effect may be obtained from combined use of COX-2 inhibitor and rat anti-bovine PD-L1 antibody in BLV-infected cattle than when the inhibitor or the antibody is used alone.


2.5. Examination of Immunostimulatory Effects due to Combined Use of COX-2 Inhibitor and Rat-Bovine Chimeric Anti-PD-L1 Antibody

Finally, the present inventors examined immunostimulatory effects due to combined use of COX-2 inhibitor and rat-bovine chimeric anti-PD-L1 antibody in BLV-infected cattle. Briefly, PBMCs derived from BLV-infected cattle were seeded in 96-well plates at 4×105 cells/well and cultured in the presence of BLV antigen or a negative control antigen for 6 days. As the negative control antigen, a culture supernatant of BLV-uninfected fetal lamb kidney cells (FLK) was used after heat treatment at 65° C. To the medium, 1,000 nM meloxicam (Sigma-Aldrich) and 1 μg/ml of rat-bovine chimeric anti-PD-L1 antibody (ch4G12; Japanese Patent Application No. 2016-159089, Konnai S, Ohashi K, Murata S, Okagawa T, Nishimori A, Maekawa N, Suzuki S, Nakajima C; Anti-PD-L1 Antibody for Cattle) were added to make a total volume of 200 μl. As a negative control for meloxicam, DMSO was used. As a negative control antibody, bovine serum-derived IgG (Sigma-Aldrich) was used. After culturing, cell proliferation capacity and cytokine production were evaluated in the same manner as described above.


Experimental results are shown in FIG. 42. In BLV-infected cattle, BLV antigen-specific CD4+ cell response, CD8+ cell response and IFN-γ production were activated by combined use of COX-2 inhibitor and rat-bovine chimeric anti PD-L1 antibody (FIG. 42a-c), as seen in the case where rat anti-bovine PD-L1 antibody was used. Thus, in BLV-infected cattle, the immunostimulatory effect of combined use of COX-2 inhibitor and PD-1/PD-L1 inhibitor was also shown when rat-bovine chimeric anti-PD-L1 antibody was used.


2.6. Examination of In Vivo Antiviral Effect Due to Combined Use of COX-2 Inhibitor and Rat-Bovine Chimeric Anti-PD-L1 Antibody

In order to examine the in vivo antiviral effect of combined use of COX-2 inhibitor and PD-1/PD-L1 inhibitor, the present inventors conducted a clinical application test using BLV-infected cattle. Two individuals (#1719 and #2702; Holstein species) of BLV-infected cattle with a high BLV provirus load were used in the test. The body weight and age at the beginning of the test were 799 kg and 7 years and 4 months for #1719 and 799 kg and 4 years and 3 months for #2702. As a COX-2 inhibitor, Metacam™ 20 injection (hereinafter, referred to as “Metacam™”; Kyoritsu Seiyaku) was inoculated subcutaneously at 0.5 mg/kg. As a PD-1/PD-L1 inhibitor, rat-bovine chimeric anti-PD-L1 antibody (ch4G12; WO2018/034225, Konnai S, Ohashi K, Murata S, Okagawa T, Nishimori A, Maekawa N, Suzuki S, Nakajima C; Anti-PD-L1 Antibody for Cattle) was administered intravenously at 1.0 mg/kg. In addition to the first inoculation, Metacam™ was inoculated 7 and 14 days after the first inoculation. Blood collection was performed 7 days before the antibody administration (at −7 day); at the antibody administration day; at day 1, day 3 and day 7 after the antibody administration; and once weekly from day 14 to day 58 after the antibody administration. Blood collection on antibody/Metacam™ administration day (at day 0) and Metacam™ administration days (at day 7 and day 14) was carried out before administration of antibody and Metacam™. Using the collected blood samples, BLV provirus loads were quantified. Provirus loads were quantified in the same manner as described in (4), section 2.1 above.


Experimental results are shown in FIG. 43. BLV provirus load on the antibody administration day (immediately before antibody administration) was 3,662 copies/50 ng DNA in #1719 and 3,846 copies/50 ng DNA in #2702. In #1719 which received rat-bovine chimeric anti-PD-L1 antibody alone, no decrease of BLV provirus load was recognized (FIG. 43a), whereas in #2702 which received a combination of Metacam™ and rat-bovine chimeric anti-PD-L1 antibody, significant decreases of BLV provirus load were recognized from day 3 to day 49 after administration (FIG. 43b). These results showed that in vivo antiviral effect is enhanced by combined use of COX-2 inhibitor and PD-1/PD-L1 inhibitor. Such combined effect will be obtained when BLV provirus load is about 3,846 copies/50 ng DNA or less. It should be noted here that this value is based on the BLV provirus load measured in the same manner as described in (4), section 2.1 above.


Example 4

Examination of Combined Effect of Anti-Bovine PD-L1 Antibody and COX-2 Inhibitor in Mycoplasma bovis-Infected Cattle


1. Introduction

The interaction between PD-1 and PD-L1 is one of the major molecular mechanisms through which pathogens evade immune responses. It has been reported that inhibition of the above interaction by using an antibody which specifically binds to either of those molecules can produce anti-pathogenic effects. In the subject Example, toward establishment of a novel control method against bovine mycoplasma infections caused by Mycoplasma bovis, the present inventors have confirmed in in vitro tests, an immunostimulatory effect induced by COX-2 inhibitor and enhancement of that effect when the inhibitor is used in combination with anti-bovine PD-L1 antibody.


2. Materials and Methods, as Well as Experimental Results

2.1. Analysis of Serum PGE2 in M. bovis-Infected Cattle


In order to elucidate the involvement of PGE2 in the disease progression of bovine mycoplasmosis caused by Mycoplasma bovis, the present inventors performed kinetic analysis of PGE2 in M. bovis-infected cattle. The amounts of PGE2 contained in the serum of M. bovis-infected cattle and M. bovis-uninfected cattle (hereinafter, referred to as “uninfected cattle”) were quantified with Prostaglandin E2 Express ELISA Kit (Cayman Chemical). For measurement, absorbance at 450 nm was measured using a microplate reader MTP-900 (Corona Electric).


Experimental results are shown in FIG. 44. Serum PGE2 was significantly higher M bovis-infected cattle than in uninfected cattle (FIG. 44a). Further, M. bovis-infected cattle were classified into groups by clinical symptom, and the concentrations of serum PGE2 were compared between groups. Those individuals which presented mastitis and pneumonia due to M. bovis showed significantly high PGE2 levels in serum as compared to the uninfected cattle (FIG. 44b). These results suggested a possibility that PGE2 is involved in the disease progression of bovine mycoplasmosis.


2.2. Correlation Analysis between Plasma PGE2 and Indicators of Immune Responses


Subsequently, the present inventors examined correlation between the amount of plasma PGE2 in M. bovis-infected cattle and M. bovis-specific IFN-γ responses or PD-L1 expression rate in CD14′ cells. First, plasma was isolated from the blood of M. bovis-infected cattle, and the amount of PGE2 contained in the plasma was measured as described in 2.1 above. Subsequently, peripheral blood mononuclear cells (PBMCs) isolated from the blood of M bovis-infected cattle were suspended in RPMI 1640 medium (Sigma-Aldrich) supplemented with 10% inactivated fetal bovine serum (Thermo Fisher Scientific), antibiotics (streptomycin 100 μg/ml, penicillin 100 U/ml) (Thermo Fisher Scientific) and 2 mM L-glutamine (Thermo Fisher Scientific) and seeded in 96-well plates (Corning) at 4×105 cells/well. Then, 1.5 μg/ml of M. bovis antigen was added and cells were cultured under stimulation at 37° C. in the presence of 5% CO2 for 5 days. As M. bovis antigen, M. bovis PG45 strain (ATCC 25523; kindly provided by Prof Hidetoshi Higuchi, Rakuno Gakuen University) was used after heat treatment. After 5 days, culture supernatant was collected and IFN-γ production was measured with ELISA for Bovine IFN-γ (MABTECH). For the measurement, absorbance at 450 nm was measured using a microplate reader MTP-900 (Corona Electric).


Further, PD-L1 expression on CD14+ cells was measured by flow cytometry analysis of PBMCs derived from M. bovis-infected cattle. First, in order to block non-specific reactions of antibody, PBS supplemented with 10% inactivated goat serum (Thermo Fisher Scientific) was added to each well in an amount of 100 μl and left stationary at room temperature for 15 mn. After washing, rat anti-bovine PD-L1 antibody (4G12; Rat IgG2a; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561) or rat IgG2a isotype control (BD Bioscience) was added and reaction was conducted at room temperature for 20 min. After washing twice, PerCp/Cy5.5-labeled anti-CD14 monoclonal antibody (CAM36A; Washington State University Monoclonal Antibody Center) and APC-labeled anti-rat Ig antibody (Southern Biotech) were reacted with cells. Anti-CD14 monoclonal antibody (CAM36A) was labeled with PerCp/Cy5.5 using Lightning-Link Conjugation Kit. After the reaction, washing was performed twice. Then, cells were analyzed with FACS Verse (BD Biosciences) and FCS Express 4 (De Novo Software). For every washing operation and dilution of antibodies, PBS supplemented with 1% bovine serum albumin (Sigma Aldrich) was used.


Experimental results are shown in FIG. 45. In M. bovis-infected cattle, a negative correlation was recognized between plasma PGE2 and M. bovis-specific IFN-γ response (FIG. 45a). Further, positive correlation was observed between plasma PGE2 and PD-L1 expression in CD14 cells (FIG. 45b). These results suggested that PGE2 is involved in immunosuppression resulting from bovine mycoplasmosis.


2.3. Expression Analysis of COX2 and EP4 in M. bovis-Infected Cattle


For more detailed analysis, expression levels of COX2 (involved in PGE2 synthesis) and the gene of EP4 (a PGE2 receptor that transmits immunosuppressive signals) were quantified by real-time PCR. Briefly, total cellular RNA was extracted from PBMCs derived from M. bovis-infected cattle and those from uninfected cattle in the same manner as described in (3), section 2.1 of Example 2, and cDNA was synthesized. Using the synthesized cDNA as a template, real-time PCR was performed with COX2-specific primers (described in (3), section 2.3 of Example 2) and EP4-specific primers (described in (2), section 2.1 of Example 3) according to the method described in Example 2.


Experimental results are shown in FIG. 46. Although PBMCs from M. bovis-infected cattle showed no significant difference in COX2 expression as compared to those from uninfected cattle (FIG. 46a), they showed significant increases in EP4 expression (FIG. 46b).


2.4. Examination of Immunostimulatory Effects due to Combined Use of COX-2 Inhibitor and Rat Anti-Bovine PD-L1 Antibody in M. bovis-Infected Cattle


Finally, the present inventors examined immunostimulatory effects due to combined use of COX-2 inhibitor and anti-bovine PD-L1 antibody in M. bovis-infected cattle. Briefly, PBMCs derived from M. bovis-infected cattle were seeded in 96-well plates (Corning) at 4×105 cells/well and cultured in the presence of 1.5 μg/ml of M. bovis antigen (as antigen-specific stimulant) or 2 μg/ml each of anti-CD3 monoclonal antibody (MM1A; Washington State University Monoclonal Antibody Center) and anti-CD28 monoclonal antibody (CC220; Bio-Rad) (as T cell stimulants) for 5 days. To the medium, 10 μM meloxicam (Sigma-Aldrich) and 10 μg/ml of rat anti-bovine PD-L1 antibody (4G12; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561) were added. As a negative control for meloxicam, DMSO was used; and as a negative control antibody, rat serum-derived IgG (Sigma-Aldrich) was used. After culturing, cell proliferation capacity and cytokine production were evaluated in the same manner as described above.


Experimental results are shown in FIG. 47. Under stimulation with M. bovis antigen, IFN-γ production tended to increase in the group which received rat anti-bovine PD-L1 antibody alone or in the group which received the combination of meloxicam and rat anti-bovine PD-L1 antibody, compared to the negative control group and the group that received meloxicam alone (FIG. 47). Under stimulation with anti-CD3 antibody and anti-CD28 antibody, IFN-γ production tended to increase in the group which received rat anti-bovine PD-L1 antibody alone, compared to the negative control group and the group that received meloxicam alone. In the group which received the combination of meloxicam and rat anti-bovine PD-L1 antibody, IFN-γ production was further enhanced although no significant difference was recognized (FIG. 47). These results suggested that immunostimulatory effect is more strongly induced in M. bovis-infected cattle by combined use of COX-2 inhibitor and rat anti-bovine PD-L1 antibody.


Reference Example 2
Rat-Bovine Chimeric Anti-PD-L1 Antibody
1. Introduction

Programmed cell death 1 (PD-1), an immunoinhibitory receptor, and its ligand programmed cell death ligand 1 (PD-L1) are molecules identified by Prof Tasuku Honjo et al., Kyoto University, as factors which inhibit excessive immune response and are deeply involved in immunotolerance. Recently, it has been elucidated that these molecules are also involved in immunosuppression in tumors. In the subject Example, for the purpose of establishing a novel therapy for bovine infections, the present inventors have prepared a chimeric antibody gene by linking the variable region gene of rat anti-bovine PD-L1 monoclonal antibody (4G12) capable of inhibiting the binding of bovine PD-1 and PD-L1 to the constant region gene of a bovine immunoglobulin (IgG1 with mutations having been introduced into the putative binding sites for Fcγ receptors in CH2 domain to inhibit ADCC activity; see FIG. 48 for amino acid numbers and mutations: 250 E->P, 251 L->V, 252 P->A, 253 G->deletion, 347 A->S, 348 P->S; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561). This chimeric antibody gene was introduced into Chinese hamster ovary cells (CHO cells). By culturing/proliferating the resultant cells, the present inventors have obtained a rat-bovine chimeric anti-bovine PD-L1 antibody (ch4G12) and confirmed its effect in vitro and in vivo.


2. Materials and Methods
2.1. Construction of Bovine PD-1 and PD-L1 Expressing Cells

The nucleotide sequences of the full length cDNAs of bovine PD-1 gene (GenBank accession number AB510901; Ikebuchi R, Konnai S, Sunden Y, Onuma M, Ohashi K. Microbiol. Immunol. 2010 May; 54(5):291-298) and bovine PD-L1 gene (GenBank accession number AB510902; Ikebuchi R, Konnai S, Shirai T, Sunden Y, Murata S, Onuma M, Ohashi K. Vet. Res. 2011 Sep. 26; 42:103) were determined. Based on the resultant genetic information, bovine PD-1 and bovine PD-L1 membrane expressing cells were prepared. First, for preparing bovine PD-1 or PD-L1 expressing plasmid, PCR was performed using a synthesized bovine PBMC-derived cDNA as a template and designed primers having Nod and HindIII (bovine PD-1) recognition sites and NheI and XhoI (bovine PD-L1) recognition sites on the 5′ side (boPD-1-myc F and R; boPD-L1-EGFP F and R). The PCR products were digested with Nod (Takara) and HindIII (Takara; bovine PD-1), NheI (Takara) and XhoI (Takara; bovine PD-L1), purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics) and cloned into pCMV-Tag1 vector (Agilent Technologies; bovine PD-1) or pEGFP-N2 vector (Clontech; bovine PD-L1) treated with restriction enzymes in the same manner. The resultant expression plasmid of interest was extracted with QIAGEN Plasmid Midi kit (Qiagen) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared expression plasmid is designated as pCMV-Tag1-boPD-1.











Primer (boPD-1-myc F):  



(SEQ ID NO: 143)



ATATGCGGCCGCATGGGGACCCCGCGGGCGCT






Primer (boPD-1-myc R):  



(SEQ ID NO: 144)



GCGCAAGCTTTCAGAGGGGCCAGGAGCAGT






Primer (boPD-L1-EGFP F):  



(SEQ ID NO: 145)



CTAGCTAGCACCATGAGGATATATAGTGTCTTAAC






Primer (boPD-L1-EGFP R):  



(SEQ ID NO: 146)



CAATCTCGAGTTACAGACAGAAGATGACTGC






Bovine PD-1 membrane expressing cells were prepared by the procedures described below. First, 2.5 μg of pCMV-Tag1-boPD-1 was introduced into 4×106 CHO-DG44 cells using Lipofectamine LTX (Invitrogen). Forty-eight hours later, the medium was exchanged with CD DG44 medium (Life Technologies) containing 800 μg/ml G418 (Enzo Life Science), 20 ml/L GlutaMAX supplement (Life Technologies), and 18 ml/L 10% Pluronic F-68 (Life Technologies), followed by selection. The resultant expression cells were reacted with rat anti-bovine PD-1 antibody 5D2 at room temperature. After washing, the cells were further reacted with anti-rat IgG microbeads-labeled antibody (Miltenyi Biotec) at room temperature. Cells expressing bovine PD-1 at high levels were isolated with Auto MACS (Miltenyi Biotec). Subsequently, re-isolation was performed in the same manner to obtain still higher purity. The resultant expression cells were subjected to cloning by limiting dilution to thereby obtain a CHO DG44 cell clone expressing bovine PD-1 at high level (bovine PD-1 expressing cells).


Bovine PD-L1 membrane expressing cells were prepared by the procedures described below. First, 2.5 μg of pEGFP-N2-boPD-L1 or pEGFP-N2 (negative control) was introduced into 4×106 CHO-DG44 cells using Lipofectamine LTX (Invitrogen). Forty-eight hours later, the medium was exchanged with CD DG44 medium (Life Technologies) containing G418 (Enzo Life Science) 800 μg/ml, GlutaMAX supplement (Life Technologies) 20 ml/L, and 10% Pluronic F-68 (Life Technologies) 18 ml/L, followed by selection and cloning by limiting dilution (bovine PD-L1 expressing cell clone). In order to confirm the expression of bovine PD-L1 in the thus prepared expressing cell clone, intracellular localization of EGFP was visualized with an inverted confocal laser microscope LSM700 (ZEISS).


2.2. Construction of Soluble Bovine PD-1 and PD-L1

Bovine PD-1-Ig expressing plasmid was constructed by the procedures described below. Briefly, the signal peptide and the extracellular region of bovine PD-1 (GenBank accession number AB510901) were linked to the Fc domain of the constant region of a known bovine IgG1 (GenBank accession number X62916) to prepare a gene sequence. After codons were optimized for CHO cells, gene synthesis was performed in such a manner that NotI recognition sequence, KOZAK sequence, bovine PD-1 signal peptide sequence, bovine PD-1 gene extracellular region sequence, bovine IgG1 Fc region sequence, and XbaI recognition sequence would be located in the gene in this order. It should be noted here that bovine IgG1 was mutated to inhibit ADCC activity; more specifically, mutations were introduced into the putative binding sites for Fcγ receptors of CH2 domain (sites of mutation: 185 E->P, 186 L->V, 187 P->A, 189 G->deletion, 281 A->S, 282 P->S; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561; the amino acid sequence of PD-1-Ig and the sites of mutation are disclosed in FIG. 2 of this article). The synthesized gene strand was digested with Nod (Takara) and XbaI (Takara), purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics), and incorporated into the cloning site (Nod and XbaI restriction enzyme recognition sequences downstream of PCMV and between INRBG and PABGH) of expression vector pDN11 (kindly provided by Prof. S. Suzuki, Hokkaido University Research Center for Zoonosis Control) treated with restriction enzymes in the same manner, whereby bovine PD-1-Ig expressing vector was constructed. The expression plasmid was purified with QIAGEN Plasmid Midi kit (Qiagen) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared expression plasmid is designated as pDN11-boPD-1-Ig.


Bovine PD-L1-Ig expressing plasmid was constructed by the procedures described below. In order to amplify the signal peptide and the extracellular region of bovine PD-L1 (GenBank accession number AB510902), primers were designed that had NheI and EcoRV recognition sites added on the 5′ side (boPD-L1-Ig F and R). PCR was performed using a synthesized bovine PBMC-derived cDNA as a template. The PCR products were digested with NheI (Takara) and EcoRV (Takara), purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics) and cloned into pCXN2.1-Rabbit IgG1 Fc vector (Niwa et al., 1991; Zettlmeissl et al., 1990; kindly provided by Dr. T. Yokomizo, Juntendo University Graduate School of Medicine, and modified in the inventors' laboratory) treated with restriction enzymes in the same manner. The expression plasmid was purified with QIAGEN Plasmid Midi kit (Qiagen) or FastGene Xpress Plasmid PLUS Kit (NIPPON Genetics) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared expression plasmid is designated as pCXN2.1-boPD-L1-Ig.











Primer (boPD-L1-Ig F):



(SEQ ID NO: 147)



GCTAGCATGAGGATATATAGTGTCTTAAC 






Primer (boPD-L1-Ig R):



(SEQ ID NO: 148)



GATATCATTCCTCTTTTTTGCTGGAT






Soluble bovine PD-1-Ig expressing cells were prepared by the procedures described below. Briefly, 2.5 μg of pDN11-boPD-1-Ig was introduced into 4×106 CHO-DG44 cells using Lipofectamine LTX (Invitrogen). Forty-eight hours later, the medium was exchanged with OptiCHO AGT medium (Life Technologies) containing 800 μg/ml G418 (Enzo Life Science) and 20 ml/L GlutaMAX supplement (Life Technologies). After cultured for 3 weeks, the cells were subjected to selection. Briefly, the concentrations of the Fc fusion recombinant protein in the culture supernatants of the resultant cell clones were measured by ELISA using anti-bovine IgG F(c) rabbit polyclonal antibody (Rockland) to thereby select those cell clones that express the Fc fusion recombinant protein at high levels. The resultant highly expressing cell clone was transferred to a G418-free medium and cultured under shaking for 14 days, followed by collection of a culture supernatant. The culture supernatant containing the Fc fusion recombinants protein was ultrafiltered with Centricon Plus-70 (Millipore). Then, the Fc fusion recombinant protein was purified with Ab-Capcher Extra (ProteNova). After purification, the buffer was exchanged with phosphate-buffered physiological saline (PBS; pH 7.4) using PD-10 Desalting Column (GE Healthcare). The resultant protein was stored at −30° C. until use in experiments (bovine PD-1-Ig). The concentration of the purified bovine PD-1-Ig was measured by ELISA using IgG F(c) rabbit polyclonal antibody (Rockland). For each washing operation in ELISA, Auto Plate Washer BIO WASHER 50 (DS Pharma Biomedical) was used. Absorbance was measured with Microplate Reader MTP-650FA (Corona Electric).


Soluble bovine PD-L1-Ig expressing cells were prepared by the procedures described below. Briefly, 30 μg of pCXN2.1-boPD-L1-Ig was introduced into 7.5×107 Expi293F cells (Life Technologies) using Expifectamine (Life Technologies). After 7-day culture under shaking, the culture supernatant was collected. The recombinant protein was purified from the supernatant using Ab-Capcher Extra (ProteNova; bovine PD-L1-Ig). After purification, the buffer was exchanged with PBS (pH 7.4) using PD MiniTrap G-25 (GE Healthcare). The resultant protein was stored at −30° C. until use in experiments (bovine PD-L1-Ig). The concentration of the purified bovine PD-L1-Ig was measured using Rabbit IgG ELISA Quantitation Set (Bethyl). For each washing operation in ELISA, Auto Plate Washer BIO WASHER 50 (DS Pharma Biomedical) was used. Absorbance was measured with Microplate Reader MTP-650FA (Corona Electric).


2.3. Preparation of Rat Anti-Bovine PD-L1 Monoclonal Antibody Producing Cells

Rat was immunized in the footpad with bovine PD-L1-Ig (Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561; bovine PD-L1-Ig was prepared by the method disclosed in this article and used for immunization). Hybridomas were established by the iliac lymph node method to thereby obtain rat anti-bovine PD-L1 monoclonal antibody producing hybridoma 4G12. With respect to the method of establishment of rat anti-bovine PD-L1 monoclonal antibody, details are disclosed in the following non-patent document (Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Vet. Res. 2013 Jul. 22; 44:59; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561).


2.4. Preparation of Rat-Bovine Chimeric Anti-Bovine PD-L1 Antibody Expressing Vector

Rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 was established by fusing the antibody constant regions of bovine IgG1 and Igλ with rat anti-bovine PD-L1 antibody 4G12 being used as an antibody variable region.


First, the genes of heavy chain and light chain variable regions were identified from a hybridoma that would produce rat anti-bovine PD-L1 antibody 4G12. Subsequently, a gene sequence was prepared in which the heavy chain and the light chain variable regions of the antibody 4G12 were linked to known constant regions of bovine IgG1 (heavy chain; modified from GenBank Accession number X62916) and bovine Igλ (light chain; GenBank Accession number X62917), respectively, and codon optimization was carried out [rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12: SEQ ID NOS: 115 and 116 (amino acid sequences), SEQ ID NOS: 117 and 118 (nucleotide sequences after codon optimization)]. It should be noted that in order to suppress the ADCC activity of bovine IgG1, mutations were added to the putative binding sites of Fcγ receptors in CH2 domain (See FIG. 48 for amino acid numbers and mutations: 250 E->P, 251 L->V, 252 P->A, 253 G->deletion, 347 A->S, 348 P->S; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology 2014 August; 142(4):551-561). Then, the gene was artificially synthesized in such a manner that Nod recognition sequence, KOZAK sequence, chimeric antibody light chain sequence, poly-A addition signal sequence (PABGH), promoter sequence (PCMV), Sad recognition sequence, intron sequence (INRBG), KOZAK sequence, chimeric antibody heavy chain sequence and XbaI recognition sequence would be located in this order. The synthesized gene strand was digested with Nod (Takara) and XbaI (Takara), purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics) and cloned into the cloning site (Nod and XbaI restriction enzyme recognition sequences downstream of PCMV and between INRBG and PABGH) of expression plasmid pDC6 (kindly provided by Prof. S. Suzuki, Hokkaido University Research Center for Zoonosis Control) treated with restriction enzymes in the same manner (FIG. 49). The resultant plasmid was extracted with QIAGEN Plasmid Midi kit (Qiagen) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared expression plasmid is designated as pDC6-boPD-L1ch4G12.


2.5. Expression of Rat-Bovine Chimeric Anti-Bovine PD-L1 Antibody

The pDC6-boPD-L1ch4G12 was transfected into CHO-DG44 cells (CHO-DG44 (dfhr−/−)) which were a dihydrofolate reductase deficient cell. Forty-eight hours later, the medium was exchanged with OptiCHO AGT medium (Life Technologies) containing 20 ml/L GlutaMAX supplement (Life Technologies). After cultured for 3 weeks, the cells were subjected to selection and cloning by limiting dilution. Subsequently, the concentrations of the chimeric antibody in the culture supernatants were measured by dot blotting and ELISA using anti-bovine IgG F(c) rabbit polyclonal antibody (Rockland) to thereby select high expression clones. Further, the selected clones expressing rat-bovine chimeric anti-bovine PD-L1 antibody at high levels were subjected to gene amplification treatment by adding a load with 60 nM methotrexate (Mtx)-containing medium. The thus established cell clone stably expressing rat-bovine chimeric anti-bovine PD-L1 antibody was transferred into Mtx-free Opti-CHO AGT medium and cultured under shaking for 14 days (125 rpm, 37° C., 5% CO2). Chimeric antibody production in the culture supernatant was measured by ELISA using anti-bovine IgG F(c) rabbit polyclonal antibody (Rockland). For each washing operation in ELISA, Auto Plate Washer BIO WASHER 50 (DS Pharma Biomedical) was used. Absorbance was measured with Microplate Reader MTP-650FA (Corona Electric). The culture supernatant at day 14 was centrifuged at 10,000 g for 10 min to remove cells, and the centrifugal supernatant was passed through a Steritop-GP 0.22 μm filter (Millipore) for sterilization and then stored at 4° C. until it was subjected to purification.


2.6. Purification of Rat-Bovine Chimeric Anti-Bovine PD-L1 Antibody

From the culture supernatant prepared as described above, each chimeric antibody was purified using Ab Capcher Extra (ProteNova). An open column method was used for binding to resin; PBS pH 7.4 was used as an equilibration buffer and a wash buffer. As an elution buffer, IgG Elution Buffer (Thermo Fisher Scientific) was used. As a neutralization buffer, 1M Tris (pH 9.0) was used. The purified antibody was subjected to buffer exchange with PBS (pH 7.4) using PD-10 Desalting Column (GE Healthcare) and concentrated using Amicon Ultra-15 (50 kDa, Millipore). The thus purified chimeric antibody was passed through a 0.22 μm syringe filter (Millipore) for sterilization and stored at 4° C. until use in experiments.


2.7. Confirmation of the Purity of Purified Rat-Bovine Chimeric Anti-Bovine PD-L1 Antibody

In order to confirm the purity of purified rat-bovine chimeric anti-bovine PD-L1 antibody, antibody proteins were detected by SDS-PAGE and CBB staining. Using 10% acrylamide gel, the purified rat-bovine chimeric antibody was electrophoresed under reducing conditions (reduction with 2-mercaptoethanol from Sigma-Aldrich) and non-reducing conditions. Bands were stained with Quick-CBB kit (Wako) and decolored in distilled water. The results are shown in FIG. 50. Bands were observed at predicted positions, that is, at 25 kDa and 50 kDa under reducing conditions and at 150 kDa under non-reducing conditions.


2.8. Binding Specificity of Rat-Bovine Chimeric Anti-Bovine PD-L1 Antibody

It was confirmed by flow cytometry that the rat-bovine chimeric anti-bovine PD-L1 antibody specifically binds to the bovine PD-L1 expressing cells (described above). First, rat anti-bovine PD-L1 antibody 4G12 or rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 was reacted with bovine PD-L1 expressing cells at room temperature for 30 min. After washing, APC-labeled anti-rat Ig goat antibody (Southern Biotech) or Alexa Fluor 647—labeled anti-bovine IgG (H+L) goat F(ab′)2 (Jackson ImmunoResearch) was reacted at room temperature for 30 min. As negative control antibody, rat IgG2a (κ) isotype control (BD Biosciences) or bovine IgG1 antibody (Bethyl) was used. After washing, each rat antibody or rat-bovine chimeric antibody bound to cell surfaces was detected by FACS Verse (BD Biosciences). For every washing operation and dilution of antibody, PBS supplemented with 1% bovine serum albumin (Sigma-Aldrich) was used.


The experimental results are shown in FIG. 51. It was revealed that rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 binds to bovine PD-L1 expressing cells in the same manner as rat anti-bovine PD-L1 antibody 4G12.


2.9. Inhibitory Activity of Rat-Bovine Chimeric Anti-PD-L1 Antibody Against Bovine PD-1/PD-L1 Binding
(1) Binding Inhibition Test on Bovine PD-L1 Expressing Cells and Soluble Bovine PD-1

Using bovine PD-L1 expressing cells (described above) and bovine PD-1-Ig (described above), bovine PD-1/PD-L1 binding inhibition by anti-bovine PD-L1 antibody was tested. First, 2×105 bovine PD-L1 expressing cells were reacted with various concentrations (0, 0.32, 0.63, 1.25, 2.5, 5 or 10 μg/ml) of rat anti-bovine PD-L1 antibody 4G12 or rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 at room temperature for 30 min. As negative control antibody, rat IgG2a (κ) isotype control (BD Biosciences) or bovine IgG1 antibody (Bethyl) was used. After washing, bovine PD-1-Ig labeled with biotin using Lightning-Link Type A Biotin Labeling Kit (Innova Bioscience) was added to a final concentration of 2 μg/ml, followed by reaction for another 30 min at room temperature. Subsequently, after washing, bovine PD-1-Ig bound to cell surfaces was detected with APC-labeled streptavidin (BioLegend). For analysis, FACS Verse (BD Biosciences) was used. For every washing operation and dilution of antibody, PBS supplemented with 1% bovine serum albumin (Sigma-Aldrich) was used. Taking the proportion of PD-1-Ig bound cells without antibody addition as 100%, the proportion of PD-1-Ig bound cells at each antibody concentration was shown as relative value.


The experimental results are shown in FIG. 52. It was revealed that like rat anti-bovine PD-L1 antibody 4G12, rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 is capable of inhibiting bovine PD-1/PD-L1 binding in a concentration dependent manner.


(2) Binding Inhibition Test on Bovine PD-1 Expressing Cells and Soluble Bovine PD-L1

Using bovine PD-1 expressing cells (described above) and bovine PD-L1-Ig (described above), bovine pD-1/PD-L1 binding inhibition by anti-bovine PD-L1 antibody was tested. First, rat anti-bovine PD-L1 antibody 4G12 or rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 at a final concentration of 0, 0.32, 0.63, 1.25, 2.5, 5 or 10 μg/ml and bovine PD-L1-Ig at a final concentration of 1 μg/ml were placed in 96-well plates, where they were reacted at room temperature for 30 min. The resultant mixture was reacted with 2×105 bovine PD-1 expressing cells at room temperature for 30 min. As negative control antibody, rat IgG2a (κ) isotype control (BD Biosciences) or bovine IgG1 antibody (Bethyl) was used. After washing, Alexa Fluor 647-labeled anti-rabbit IgG (H+L) goat F(ab′)2 (Life Technologies) was reacted at room temperature for 30 min to thereby detect bovine PD-L1-Ig bound to cell surfaces. For analysis, FACS Verse (BD Biosciences) was used. For every washing operation and dilution of antibody, PBS supplemented with 1% bovine serum albumin (Sigma-Aldrich) was used. Taking the proportion of PD-L1-Ig bound cells without antibody addition as 100%, the proportion of PD-L1-Ig bound cells at each antibody concentration was shown as relative value.


The experimental results are shown in FIG. 53. It was revealed that like rat anti-bovine PD-L1 antibody 4G12, rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 is capable of inhibiting bovine PD-1/PD-L1 binding in a concentration dependent manner.


2.10. Biological Activity Test Using Rat-Bovine Chimeric Anti-Bovine PD-L1 Antibody
(1) Effect on Cell Proliferation

In order to confirm that bovine PD-1/PD-L1 binding inhibition by rat-bovine chimeric anti-PD-L1 antibody activates lymphocytes, a biological activity test was performed using cell proliferation as an indicator. Briefly, bovine PBMCs isolated from peripheral blood of healthy cattle were suspended in PBS to give a concentration of 10×106 cells/ml, and reacted with carboxyfluorescein succinimidyl ester (CFSE) at room temperature for 20 min. After washing twice with RPMI 1640 medium (Sigma-Aldrich) containing 10% inactivated fetal bovine serum (Cell Culture Technologies), antibiotics (streptomycin 200 μg/ml, penicillin 200 U/ml) (Life Technologies) and 0.01% L-glutamine (Life Technologies), the PBMCs were reacted with anti-bovine CD3 mouse antibody (WSU Monoclonal Antibody Center) at 4° C. for 30 min. After washing, the PBMCs were reacted with anti-mouse IgG1 microbeads (Miltenyi Biotec) at 4° C. for 15 min, followed by isolation of CD3-positive T cells using autoMACS™ Pro(Miltenyi Biotec). To the isolated CD3-positive T cells, anti-bovine CD3 mouse antibody (WSU Monoclonal Antibody Center) and anti-bovine CD28 mouse antibody (Bio-Rad) were added. Then, the cells were co-cultured with bovine PD-L1 expressing cells (CD3-positive T cells: bovine PD-L1 expressing cells =10:1) in the presence or absence of 10 μg/ml of rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12. As a control for antibodies, serum-derived bovine IgG (Sigma-Aldrich) was used; as a control for PD-L1 expressing cells, EGFP expressing cells transfected with pEGFP-N2 were used. After a 6-day coculture, cells were harvested and reacted with anti-bovine CD4 mouse antibody and anti-bovine CD8 mouse antibody (Bio-Rad) at room temperature for 30 min. For the labeling of antibodies, Zenon Mouse IgG1 Labeling Kits (Life Technologies) or Lightning-Link Kit (Innova Biosciences) was used. For analysis, FACS Verse (BD Biosciences) was used. For washing operation after culturing and dilution of antibody, PBS supplemented with 1% bovine serum albumin (Sigma-Aldrich) was used.


The experimental results are shown in FIG. 54. Proliferation of CD4-positive and CD8-positive T cells was significantly suppressed by co-culture with bovine PD-L1 expressing cells. It was revealed that rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 inhibits this suppression in CD4-positive T cells.


(2) Effect on IFN-γ Production

In order to confirm that bovine PD-1/PD-L1 binding inhibition by rat-bovine chimeric anti-PD-L1 antibody activates lymphocytes, a biological activity test was performed using IFN-γ production as an indicator. Briefly, PBMCs isolated from peripheral blood of BLV-infected cattle were suspended in RPMI medium (Sigma-Aldrich) containing 10% inactivated fetal bovine serum (Cell Culture Technologies), antibiotics (streptomycin 200 μg/ml, penicillin 200 U/ml) (Life Technologies) and 0.01% L-glutamine (Life Technologies) to give a concentration of 4×106 cells/ml. To the PBMCs, 10 μg/ml of rat anti-bovine PD-L1 antibody 4G12 or rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12, and 2% BLV-infected fetal lamp kidney cell (FLK-BLV) culture supernatant were added; culturing was then performed at 37° C. under 5% CO2 for 6 days. As control antibodies, serum-derived rat IgG (Sigma-Aldrich) and serum-derived bovine IgG (Sigma-Aldrich) were used. After a 6-day culture, a culture supernatant was collected, and IFN-γ production was measured with Bovine IFN-γ ELISA Kit (BETYL). For each washing operation in ELISA, Auto Plate Washer BIO WASHER 50 (DS Pharma Biomedical) was used. Absorbance was measured with Microplate Reader MTP-650FA (Corona Electric).


The experimental results are shown in FIG. 55. It was revealed that rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 increases bovine PBMCs' IFN-γ response to BLV antigen in the same manner as rat anti-bovine PD-L1 antibody 4G12 (n=10).


2.11. Inoculation Test on Cattle

Established rat-bovine chimeric anti-bovine PD-L1 antibody ch4G12 (about 260 mg; 1 mg/kg) was intravenously administered into experimentally BLV-infected calf (Holstein, male, 7 months old, 267 kg). Blood samples were collected chronologically from the infected calf, followed by isolation of PBMCs by density gradient centrifugation.


(1) Cell Proliferation Response of T Cells to BLV Antigen

Bovine PBMCs were suspended in PBS and reacted with CFSE at room temperature for 20 min. After washing twice with RPMI 1640 medium (Sigma-Aldrich) containing 10% inactivated fetal bovine serum (Cell Culture Technologies), antibiotics (streptomycin 200 μg/ml, penicillin 200 U/ml) (Life Technologies) and 0.01% L-glutamine (Life Technologies), the cell concentration was adjusted to 4×106 cells/ml using the same medium. Culture supernatant of 2% BLV-infected fetal lamp kidney cells (FLK-BLV) was added to the PBMCs, which were then cultured at 37° C. under 5% CO2 for 6 days. As a control, culture supernatant of 2% BLV-not-infected fetal lamp kidney cells (FLK) was used. After a 6-day culture, PBMCs were collected and reacted with anti-bovine CD4 mouse antibody, anti-bovine CD8 mouse antibody and anti-bovine IgM mouse antibody (Bio-Rad) at 4° C. for 20 min. For the labeling of antibodies, Zenon Mouse IgG1 Labeling Kits (Life Technologies) or Lightning-Link Kit (Innova Biosciences) was used. For analysis, FACS Verse (BD Biosciences) was used. For every washing operation and dilution of antibody, PBS supplemented with 1% bovine serum albumin (Sigma-Aldrich) was used.


The experimental results are shown in FIG. 56. As a result of antibody administration, BLV-specific cell proliferation response of CD4-positive T cells increased compared to the response before administration.


(2) Changes in the BLV Provirus Load

DNA was extracted from isolated bovine PBMCs using Wizard DNA Purification kit (Promega). The concentration of the extracted DNA was quantitatively determined, taking the absorbance (260 nm) measured with Nanodrop 8000 Spectrophotometer (ThermoFisher Scientific) as a reference. In order to measure the BLV provirus load in PBMCs, real time PCR was performed using Cycleave PCR Reaction Mix SP (TaKaRa) and Probe/Primer/Positive control for bovine leukemia virus detection (TaKaRa). Light Cycler 480 System II (Roche Diagnosis) was used for measurement.


The experimental results are shown in FIG. 57. The BLV provirus load significantly decreased until the end of test period compared to the load before administration.


[Example 5] Establishment of Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody
1. Introduction

Programmed cell death 1 (PD-1), an immunoinhibitory receptor, and its ligand programmed cell death ligand 1 (PD-L1) are molecules identified by Prof Tasuku Honjo et al., Kyoto University, as factors which inhibit excessive immune response and are deeply involved in immunotolerance. Recently, it has been elucidated that these molecules are also involved in immunosuppression in tumors. In the subject Example, for the purpose of establishing a novel therapy for bovine infections, a chimeric antibody gene was prepared in which variable region genes of rat anti-bovine PD-1 monoclonal antibody 5D2 capable of inhibiting the binding of bovine PD-1 to PD-L1 were linked to constant region genes of bovine immunoglobulins (bovine IgG1 and Igλ, with mutations having been introduced into the putative binding sites of Fcγ receptors in bovine IgG1's CH2 domain to inhibit ADCC activity; see FIGS. 1 and 11 for amino acid numbers and mutations: 250 E->P, 251 L->V, 252 P->A, 253 G->deletion, 347 A->S, 348 P->S; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology, 142(4):551-561, August 2014). The resultant chimeric antibody gene was introduced into Chinese hamster ovary cells (CHO cells), which were cultured and proliferated to produce a rat-bovine chimeric anti-bovine PD-1 antibody ch5D2. The effect of this chimeric antibody was confirmed in vitro and in vivo.


2. Materials, Methods and Experimental Results
2.1. Construction of Bovine PD-1 and PD-L1 Expressing Cells

The nucleotide sequences of the full length cDNAs of bovine PD-1 gene (GenBank accession number AB510901; Ikebuchi R, Konnai S, Sunden Y, Onuma M, Ohashi K. Microbiol. Immunol., 54(5):291-298; May 2010) and bovine PD-L1 gene (GenBank accession number AB510902; Ikebuchi R, Konnai S, Shirai T, Sunden Y, Murata S, Onuma M, Ohashi K. Vet. Res., 42:103, Sep. 26, 2011) were determined. Based on the resultant genetic information, bovine PD-1 and bovine PD-L1 expressing cells were prepared. First, for preparing bovine PD-1 or PD-L1 expressing plasmid, PCR was performed using a synthesized bovine peripheral blood mononuclear cell (PBMC)-derived cDNA as a template and designed primers having Nod and HindIII (bovine PD-1) recognition sites or NheI and XhoI (bovine PD-L1) recognition sites on the 5′ side (boPD-1-myc F and R; or boPD-L1-EGFP F and R). The PCR products were digested with Nod (Takara) and HindIII (Takara; bovine PD-1) or NheI (Takara) and XhoI (Takara; bovine PD-L1), purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics) and cloned into pCMV-Tag1 vector (Agilent Technologies; bovine PD-1) or pEGFP-N2 vector (Clontech; bovine PD-L1) treated with the restriction enzymes in the same manner. The resultant expression plasmid of interest was extracted with QIAGEN Plasmid Midi kit (Qiagen) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared expression plasmid is designated as pCMV-Tag1-boPD-1 or pEGFP-N2-boPD-L1.











Primer (boPD-1-myc F):  



(SEQ ID NO: 209)



ATATGCGGCCGCATGGGGACCCCGCGGGCGCT






Primer (boPD-1-myc R):  



(SEQ ID NO: 210)



GCGCAAGCTTTCAGAGGGGCCAGGAGCAGT






Primer (boPD-L1-EGFP F):  



(SEQ ID NO: 211)



CTAGCTAGCACCATGAGGATATATAGTGTCTTAAC






Primer (boPD-L1-EGFP R):  



(SEQ ID NO: 212)



CAATCTCGAGTTACAGACAGAAGATGACTGC






Bovine PD-1 expressing cells were prepared by the procedures described below. First, 2.5 μg of pCMV-Tag1-boPD-1 was introduced into 4×106 CHO-DG44 cells using Lipofectamine LTX (Invitrogen). Forty-eight hours later, the medium was exchanged with CD DG44 medium (Life Technologies) containing 800 μg/ml G418 (Enzo Life Science), 20 ml/L GlutaMAX supplement (Life Technologies), and 18 ml/L 10% Pluronic F-68 (Life Technologies), followed by selection. The resultant expression cells were reacted with rat anti-bovine PD-1 antibody 5D2 at room temperature. After washing, the cells were further reacted with anti-rat IgG microbead-labeled antibody (Miltenyi Biotec) at room temperature. Cells expressing bovine PD-1 at high levels were isolated with Auto MACS (Miltenyi Biotec). Subsequently, re-isolation was performed in the same manner to obtain still higher purity. The resultant expression cells were subjected to cloning by limiting dilution to thereby obtain a CHO DG44 cell clone expressing bovine PD-1 at high level (bovine PD-1 expressing cells).


Bovine PD-L1 membrane expressing cells were prepared by the procedures described below. First, 2.5 μg of pEGFP-N2-boPD-L1 or pEGFP-N2 (negative control) was introduced into 4×106 CHO-DG44 cells using Lipofectamine LTX (Invitrogen). Forty-eight hours later, the medium was exchanged with CD DG44 medium (Life Technologies) containing 800 μg/ml G418 (Enzo Life Science), 20 ml/L GlutaMAX supplement (Life Technologies) and 18 ml/L 10% Pluronic F-68 (Life Technologies), followed by selection and cloning by limiting dilution (bovine PD-L1 expressing cell clone). In order to confirm the expression of bovine PD-L1 in the thus prepared cell clone, intracellular localization of EGFP was visualized with an inverted confocal laser microscope LSM700 (ZEISS).


2.2 Construction of Soluble Bovine PD-1

Bovine PD-1-Ig expressing plasmid was constructed by the procedures described below. Briefly, the signal peptide and the extracellular region of bovine PD-1 (GenBank accession number AB510901) were linked to the constant region of a known bovine IgG1 (GenBank accession number X62916) to prepare a gene sequence. After codons were optimized for CHO cells, gene synthesis was performed in such a manner that Nod recognition sequence, KOZAK sequence, bovine PD-1 signal peptide sequence, bovine PD-1 gene extracellular region sequence, bovine IgG1 Fc region sequence, and XbaI recognition sequence would be located in the gene in this order. It should be noted here that bovine IgG1 was mutated to inhibit ADCC activity; more specifically, mutations were introduced into the putative binding sites for Fcγ receptors of CH2 domain (sites of mutation: 185 E->P, 186 L-V, 187 P->A, 189 G->deletion, 281 A->S, 282 P->S; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology, 142(4):551-561, August 204; the amino acid sequence of PD-1-Ig and the sites of mutation are disclosed in FIG. 2 of this article). The synthesized gene strand was digested with Nod (Takara) and XbaI (Takara), purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics), and incorporated into the cloning site (Nod and XbaI restriction enzyme recognition sequences downstream of PCMV and between INRBG and PABGH) of expression vector pDN11 (kindly provided by Prof. S. Suzuki, Hokkaido University Research Center for Zoonosis Control) treated with the restriction enzymes in the same manner, whereby bovine PD-1-Ig expressing vector was constructed. The expression plasmid was purified with QIAGEN Plasmid Midi kit (Qiagen) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared expression plasmid is designated as pDN11-boPD-1-1g.


Bovine PD-1-His expressing plasmid was prepared by the procedures described below. Briefly, for the purpose of amplifying the signal peptide and the extracellular region of bovine PD-1 (GenBank accession number AB510901), primers were designed in which NotI and XhoI recognition sites were added on the 5′ side (boPD-1-His F and R). A genetic sequence encoding a 6xHis tag was added to the reverse primer. PCR was performed using a synthesized bovine PBMC-derived cDNA as a template. The respective PCR products were digested with Nod (Takara) and XhoI (Takara), purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics) and cloned into pCXN2.1(+) vector (Niwa H, Yamamura K, Miyazaki J. Gene, 108(2):193-199; Dec. 15, 1991; kindly provided by Dr. T. Yokomizo, Juntendo University Graduate School of Medicine) treated with the restriction enzymes in the same manner. The resultant expression plasmid was purified with FastGene Xpress Plasmid PLUS Kit (NIPPON Genetics) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared expression plasmid is designated as pCXN2.1-boPD-1-His.









Primer (boPD-1-His F): 


(SEQ ID NO: 213)


ATAAGAATGCGGCCGCCACCATGGGGACCCCGCGGGCGCT





Primer (boPD-1-His R):


(SEQ ID NO: 214)


GCCCTCGAGTTAATGGTGATGGTGATGGTGGATGACCAGGCTCTGCATCT 






Soluble bovine PD-1-Ig expressing cells were prepared by the procedures described below. Briefly, 2.5 μg of pDN11-boPD-1-Ig was introduced into 4×106 CHO-DG44 cells using Lipofectamine LTX (Invitrogen). Forty-eight hours later, the medium was exchanged with CD OptiCHO medium (Life Technologies) containing 800 μg/ml G418 (Enzo Life Science) and 20 ml/L GlutaMAX supplement (Life Technologies). After cultured for 3 weeks, the cells were subjected to selection. Briefly, the concentrations of the Fc fusion recombinant protein in the culture supernatants of the resultant cell clones were measured by ELISA using anti-bovine IgG F(c) rabbit polyclonal antibody (Rockland) to thereby select those cell clones that express the Fc fusion recombinant protein at high levels. The resultant highly expressing cell clone was transferred to a G418-free medium and cultured under shaking for 14 days, followed by collection of a culture supernatant. The culture supernatant containing the Fc fusion recombinants protein was ultrafiltered with Centricon Plus-70 (Millipore). Then, the Fc fusion recombinant protein was purified with Ab-Capcher Extra (ProteNova). After purification, the buffer was exchanged with phosphate-buffered physiological saline (PBS; pH 7.4) using PD-10 Desalting Column (GE Healthcare). The resultant protein was stored at −30° C. until use in experiments (bovine PD-1-Ig). The concentration of the purified bovine PD-1-Ig was measured by ELISA using IgG F(c) rabbit polyclonal antibody (Rockland). For each washing operation in ELISA, Auto Plate Washer BIO WASHER 50 (DS Pharma Biomedical) was used. Absorbance was measured with Microplate Reader MTP-650FA (Corona Electric).


Soluble bovine PD-1-His expressing cells were prepared by the procedures described below. Briefly, 30 μg of pCXN2.1-boPD-1-His was introduced into 7.5×107 Expi293F cells (Life Technologies) using Expifectamine (Life Technologies). After a 7-day culture under shaking, the culture supernatant was collected. The recombinant protein of interest was purified from the culture supernatant using TALON Metal Affinity Resin (Clontech; bovine PD-1-His). After purification, the buffer was exchanged with PBS (pH 7.4) using PD MiniTrap G-25 (GE Healthcare). The resultant protein was stored at −30° C. until use in experiments (bovine PD-1-His). The concentration of purified bovine PD-1-His was quantitatively determined in terms of the absorbance (280 nm) measured with Nanodrop8000 Spectrophotometer (Thermo Fisher Scientific).


2.3. Preparation of Rat Anti-Bovine PD-1 Monoclonal Antibody Producing Cells

Rat was immunized in the footpad with bovine PD-1-Ig (described above). Hybridomas were established by the iliac lymph node method to thereby obtain rat anti-bovine PD-1 monoclonal antibody producing hybridoma 5D2. With respect to the method of establishment of rat anti-bovine PD-1 monoclonal antibody, details are disclosed in the following non-patent document (Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Vet. Res. 44:59; Jul. 22, 2013).


2.4. Preparation of Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody Expressing Vector

Rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 was established by fusing the antibody constant regions of bovine IgG1 and Igλ, with rat anti-bovine PD-1 antibody 5D2 being used as antibody variable regions.


First, the genes of heavy chain and light chain variable regions were identified by the RACE method from a hybridoma that would produce rat anti-bovine PD-1 antibody 5D2. Subsequently, a gene sequence was prepared in which the heavy chain and the light chain variable regions of the rat anti-bovine PD-1 antibody 5D2 were linked to known constant regions of bovine IgG1 (heavy chain, modified from GenBank Accession number X62916) and bovine Igλ (light chain; GenBank Accession number X62917), respectively. Then, codon optimization was carried out (SEQ ID NOS: 157 and 158 (amino acid sequences); SEQ ID NOS: 162 and 163 (nucleotide sequences after codon optimization)). It should be noted that bovine IgG1 had mutations added to the putative binding sites of Fcγ receptors in CH2 domain in order to suppress ADCC activity (See FIGS. 1 and 11 for amino acid numbers and mutations: 251 E->P, 252 L->V, 253 P->A, 254 G->deletion, 348 A->S, 349 P->S; Ikebuchi R, Konnai S Okagawa, T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology, 142(4):551-561; August 2014). Then, the gene was artificially synthesized in such a manner that Nod recognition sequence, KOZAK sequence, chimeric antibody light chain sequence, poly-A addition signal sequence (PABGH), promoter sequence (PCMV), Sad recognition sequence, intron sequence (INRBG), KOZAK sequence, chimeric antibody heavy chain sequence and XbaI recognition sequence would be located in this order. The synthesized gene strand was digested with Nod (Takara) and XbaI (Takara), purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics) and cloned into the cloning site (Nod and XbaI restriction enzyme recognition sequences downstream of PCMV and between INRBG and PABGH) of expression plasmid pDN112 (kindly provided by Prof S. Suzuki, Hokkaido University Research Center for Zoonosis Control) treated with the restriction enzymes in the same manner (FIG. 59). The resultant plasmid of interest was extracted with QIAGEN Plasmid Midi kit (Qiagen) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared expression plasmid is designated as pDN112-boPD-1ch5D2.


2.5. Expression of Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody (FIG. 60)

The pDN112-boPD-1ch5D2 prepared above was transfected into CHO-DG44 cells (CHO-DG44(dfhr−/−)) which were a dihydrofolate reductase deficient cell. Forty-eight hours later, the medium was exchanged with CD OptiCHO medium (Life Technologies) containing 2 mM GlutaMAX supplement (Life Technologies) and 800 μg/ml G418 sulfate (Enzo Life Science). After cultured for 3 weeks, the expression cells were subjected to selection and cloning by limiting dilution. Subsequently, the concentrations of the chimeric antibody in the culture supernatants were measured by dot blotting and ELISA using anti-bovine IgG F(c) rabbit polyclonal antibody (Rockland) to thereby select high expression clones. Further, to the selected clones expressing rat-bovine chimeric anti-bovine PD-1 antibody at high levels were subjected to gene amplification treatment by adding a load with 60 nM methotrexate (Mtx; Wako)-containing medium. The thus established cell clone stably expressing rat-bovine chimeric anti-bovine PD-1 antibody was transferred into Mtx-free CD Opti-CHO medium and cultured under shaking for 14 days (125 rpm, 37° C., 5% CO2). Chimeric antibody production in the culture supernatant was measured by ELISA using anti-bovine IgG F(c) rabbit polyclonal antibody (Rockland). For each washing operation in ELISA, Auto Plate Washer BIO WASHER 50 (DS Pharma Biomedical) was used. Absorbance was measured with Microplate Reader MTP-650FA (Corona Electric). The culture supernatant at day 14 was centrifuged at 10,000 g for 10 min to remove cells, and the centrifugal supernatant was passed through a Steritop-GP 0.22 μm filter (Millipore) for sterilization and then stored at 4° C. until it was subjected to purification.


The results are shown in FIG. 60A. Among the rat-bovine chimeric anti-bovine PD-1 antibody expressing cell clones, the most productive clone secreted 91.7 mg/l of the chimeric antibody into the culture supernatant during the 14-day culture under shaking.


2.6. Purification of Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody

From the culture supernatant prepared as described above, each chimeric antibody was purified using Ab Capcher Extra (ProteNova). An open column method was used for binding to resin; 1.5 M Glycine/3 M NaCl (pH 8.0) was used as equilibration buffer and wash buffer. As elution buffer, 0.1 M Glycine-HCl (pH 2.8) was used. As neutralization buffer, 1M Tris (pH 9.0) was used. The purified antibody was subjected to buffer exchange with PBS (pH 7.4) using PD-10 Desalting Column (GE Healthcare) and concentrated using Amicon Ultra-15 (50 kDa, Millipore). The thus purified chimeric antibody was passed through a 0.22 μm syringe filter (Pall Life Sciences) for sterilization and stored at 4° C. until use in experiments.


2.7. Confirmation of the Purity of Purified Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody (FIG. 60)

In order to confirm the purity of purified rat-bovine chimeric anti-bovine PD-1 antibody, antibody proteins were detected by SDS-PAGE and CBB staining. Purified rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 was suspended in Laemmli Sample Buffer (Bio-Rad) and denatured at 95° C. for 5 min under reducing conditions (reduced with 2-mercaptoethaanol; Sigma-Aldrich) or under non-reducing conditions. The thus prepared samples were electrophoresed using 10% polyacrylamide gel. As molecular weight markers, Precision Plus Protein All Blue Standards (Bio-Rad) were used. After electrophoresis, the gel was stained with Quick-CBB kit (Wako) and subsequently decolored in distilled water.


The results are shown in FIG. 60B. Bands of rat-bovine chimeric anti-bovine PD-1 antibody were observed at predicted positions, that is, at 25 kDa (light chain) and 50 kDa (heavy chain) under reducing conditions and at 150 kDa under non-reducing conditions.


2.8. Binding Specificity of Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody (FIG. 61)

It was confirmed by flow cytometry that rat-bovine chimeric anti-bovine PD-1 antibody specifically binds to bovine PD-1 expressing cells (described above). First, rat anti-bovine PD-1 antibody 5D2 or rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 was reacted with bovine PD-1 expressing cells at room temperature for 30 min. After washing, Allophycocyanine (APC)-labeled anti-rat Ig goat antibody (Southern Biotech) or Alexa Fluor 647-labeled anti-bovine IgG (H+L) goat F(ab′)2 (Jackson ImmunoResearch) was reacted at room temperature for 30 min. As negative control antibody, rat IgG2a (κ) isotype control (BD Biosciences) or bovine IgG1 antibody (Bethyl) was used. After washing, each rat antibody or rat-bovine chimeric antibody bound to cell surfaces was detected by FACS Verse (BD Biosciences). For every washing operation and dilution of antibodies, PBS supplemented with 1% bovine serum albumin (Sigma-Aldrich) was used.


The experimental results are shown in FIG. 61. It was revealed that rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 binds to bovine PD-1 expressing cells in the same manner as rat anti-bovine PD-1 antibody 5D2.


2.9. PD-1 Binding Avidity of Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody

The binding avidities to bovine PD-1 of rat anti-bovine PD-1 antibody 5D2 and rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 were measured by surface plasmon resonance using a biomolecular interaction analyzer (Biacore X100). Briefly, bovine PD-1-His (described above) was immobilized on a CM5 sensor chip (GE Healthcare) as a ligand. Subsequently, rat anti-bovine PD-1 antibody 5D2 or rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 was reacted as an analyte, followed by single kinetics analysis. The experiment was repeated 3 times under the same conditions. Binding constant (kd value) and dissociation constant (ka value) were determined in each experiment, and binding avidity (KD value) was obtained.


The experimental results are shown in the table below. The binding avidity of rat-bovine chimeric anti-bovine PD-1 antibody for PD-1 protein was similar to that of rat anti-bovine PD-1 antibody 5D2, with no statistical difference observed (p>0.05; Welch's t-test).















Anti-Bovine





PD-1





Antibody
ka (1/Ms)
kd (1/s)
KD (M)







5D2
1.84 × 104 ± 0.27
2.15 × 10−4 ± 0.44
1.22 × 10−8 ± 0.39


ch5D2
2.07 × 104 ± 0.06
2.16 × 10−4 ± 1.12
1.05 × 10−8 ± 0.58









2.10. Blockade of Bovine PD-1/PD-L1 Binding by Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody (FIG. 52)

Using bovine PD-L1 expressing cells (described above) and bovine PD-1-Ig (described above), bovine PD-1/PD-L1 binding inhibition by anti-PD-1 antibodies was tested. First, rat anti-bovine PD-1 antibody 5D2 or rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 (final concentration: 0, 0.39, 0.78, 1.56, 3.12, 6.25, 12.5, 25 or 50 μg/ml) and bovine PD-1-Ig (final concentration: 5 μg/ml) labeled with biotin using Lightning-Link Type A Biotin Labeling Kit (Innova Biosciences) were added to 96-well plates, followed by reaction at 37° C. for 30 min. The resultant mixture was reacted with 1×105 bovine PD-L1 expressing cells at 37° C. for 30 mn. After washing, the reaction mixture was reacted with APC-labeled streptavidin (BioLegend) at room temperature for 30 min to thereby detect bovine PD-1-Ig bound to cell surfaces. For analysis, FACS Verse (BD Biosciences) was used. For every washing operation and dilution of antibodies, PBS supplemented with 1% bovine serum albumin (Sigma-Aldrich) was used. Taking the proportion of bovine PD-1-Ig-bound cells without addition of antibodies as 100%, the proportion of bovine PD-1-Ig-bound cells at each antibody concentration was shown as a relative value.


The experimental results are shown in FIG. 62. Rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 inhibited the binding of PD-1-Ig to PD-L1 expressing cells by the same degree as rat anti-bovine PD-1 antibody 5D2 did.


2.11. CDR Analysis of Rat Anti-Bovine PD-1 Antibody

The complementarity-determining regions (CDRs) of rat anti-bovine PD-1 antibody 5D2 were determined using NCBI IGBLAST (http://www.ncbi.nlm.nih.2ov/i2blast/). The results are shown in FIG. 58.


2.12. Inoculation Test on Cattle with Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody


Established rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 (14 mg; 0.08 mg/kg) was intravenously administrated into an experimentally BLV-infected calf (Holstein, male, 4 months old, 173.5 kg). Blood samples were collected chronologically from the infected calf, followed by collection of blood (with heparin sodium (Ajinomoto) used as anticoagulant) and serum. Peripheral blood mononuclear cells (PBMCs) were isolated from the blood by density gradient centrifugation using Percoll (GE Healthcare).


2.13. Kinetics of Administered Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody in Blood (FIG. 63)

Bovine PD-1-His (described above) was immobilized on ELISA plates (H type, Sumitomo Bakelite) at a final concentration of 10 μg/ml at 4° C. overnight. Subsequently, each well was washed with 200 μl of 0.05% Tween 20-supplemented Tris-buffered saline (TBS-T) five times, followed by blocking with 1% skim milk-supplemented TBS-T at room temperature for 1 hr. Another washing was carried out in the same manner. The serum collected from the test calf was added to each well and reacted at room temperature for 1 hr. After washing, horseradish peroxidase-labeled anti-bovine IgG F(c) rabbit polyclonal antibody (Rockland) was reacted at room temperature for 1 hr. Each well was washed again and then TMB One Component Substrate (Bethyl) was added for coloring. The enzyme reaction was terminated with 0.18 M dilute sulfuric acid. Absorbance (450 nm) was measured with Microplate Reader MTP-650FA (Corona Electric). For every plate washing operation, Auto Plate Washer BIO WASHER 50 (DS Pharma Biomedical) was used.


The experimental results are shown in FIG. 63. Rat-bovine chimeric anti-bovine PD-1 antibody was detected in the serum of the test calf until 70 days after administration (at the end of the clinical test). The antibody retained particularly high concentrations for one week after administration.


2.14. Cell Proliferation Response of T Cells to BLV Antigen (FIG. 64)

Bovine PBMCs were suspended in PBS and reacted with carboxyfluorescein succinimidyl ester (CFSE; Invitrogen) at room temperature for 20 min for labeling. After washing twice with RPMI 1640 medium (Sigma-Aldrich) containing 10% inactivated fetal bovine serum (Cell Culture Technologies), penicillin 200 U/ml, streptomycin 200 μg/ml and 0.01% L-glutamine (Life Technologies), cell concentration was adjusted to 4×106 cells/ml using the same medium. To the PBMCs, culture supernatant of 2% BLV-infected fetal lamb kidney cell (FLK-BLV), culture supernatant of fetal lamb kidney cell (FLK) not infected with 2% BLV, or BLV gp51 peptide mix 0.1 μg/ml or 1 μg/ml was added, followed by a 6-day culture at 37° C. under 5% CO2. After 6 days, PBMCs were recovered and reacted with Alexa Fluor 647-labeled mouse anti-bovine CD4 antibody (CC30, AbD Serotec), Peridinin-chlorophyll-protein complex/cyanin 5.5-labeled mouse anti-bovine CD8 antibody (CC63, AbD Serotec) and R-Phycoerythrin/cyanin 7 (PE/Cy7)-labeled anti-bovine IgM mouse antibody (IL-A30, AbD Serotec) at 4° C. for 20 min. For labeling antibodies, Zenon Mouse IgG1 Labeling Kits (Life Technologies) or Lightning-Link Kits (Innova Biosciences) was used. For analysis, FACS Verse (BD Biosciences) was used. For every washing operation and dilution of antibodies, PBS supplemented with 1% bovine serum albumin (Sigma-Aldrich) was used. With respect to the proportion of proliferated T cells (CFSElow cells), statistical test was performed using the method of Dunnett.


The experimental results are shown in FIG. 64. Upon administration of rat-bovine chimeric anti-bovine PD-1 antibody, BLV-specific cell proliferative response in CD4+ T cells showed a statistically significant increase immediately after the administration, compared to the response before administration.


2.15. Transition in BLV Proviral Load (FIG. 65)

DNA was extracted from isolated bovine PBMCs using Wizard DNA Purification kit (Promega). The concentration of the extracted DNA was quantitatively determined based on the absorbance (260 nm) measured with Nanodrop 8000 Spectrophotometer (Thermo Fisher Scientific). For measuring BLV proviral load in PBMCs, real time PCR was performed using Cycleave PCR Reaction Mix SP (Takara) and Probe/Primer/Positive control (Takara) for bovine leukemia virus detection. LightCycler480 System II (Roche Diagnosis) was used for the measurement. With respect to the measured proviral load, statistical test was performed by the method of Dunnett.


The experimental results are shown in FIG. 65. Upon administration of rat-bovine chimeric anti-bovine PD-1 antibody, BLV proviral load in PBMCs showed a statistically significant decrease immediately after the administration, compared to the load before administration. The BLV proviral load remained at low levels until the end of the clinical test (day 70).


[Example 6] Application of Anti-PD-1 Antibody to Other Animal Species
1. Materials, Methods and Experimental Results
1.1. Identification of Ovine and Water Buffalo PD-1 Genes

In order to determine the full-lengths of the coding sequences (CDSs) of ovine and water buffalo PD-1 cDNAs, primers for amplifying the full lengths of CDSs were first designed (ovPD-1 CDS F and R; buPD-1 CDS F1, R1, F2 and R2) based on the nucleotide sequences of ovine and water buffalo PD-1 genes (GenBank accession numbers BC123854 and XM_012176227), and then PCR was performed using a synthesized ovine or water buffalo PBMC-derived cDNA as a template. For the resultant amplified products, nucleotide sequences were determined with a capillary sequencer according to conventional methods (Mingala C N, Konnai S, Ikebuchi R, Ohashi K. Comp. Immunol. Microbiol. Infect. Dis., 34(1):55-63; January 2011; Water buffalo PD-1 gene was identified in this article).











Primer (ovPD-1 CDS F):



(SEQ ID NO: 215)



ATGGGGACCCCGCGGGCGCC






Primer (ovPD-1 CDS R):  



(SEQ ID NO: 216)



TCAGAGGGGCCAGGAGCAGTGTCCA






Primer (buPD-1 CDS F1):  



(SEQ ID NO: 217)



ATGGGGACCCCGCGGGCGCT






Primer (buPD-1 CDS R1):  



(SEQ ID NO: 218)



GATGACCAGGCTCTGCATCT






Primer (buPD-1 CDS F2):  



(SEQ ID NO: 219)



AATGACAGCGGCGTCTACTT






Primer (buPD-1 CDS R2): 



(SEQ ID NO: 220)



TCAGAGGGGCCAGGAGCAGT






1.2. Construction of Ovine PD-1 Expressing COS-7 Cells

In order to prepare ovine PD-1 expression plasmid, PCR was performed using a synthesized ovine PBMC-derived cDNA as a template and primers designed by adding BglII and SmaI recognition sites on the 5′ side (ovPD-1-EGFP F and R). The resultant PCR products were digested with BglII (Takara) and SmaI (Takara), purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics) and cloned into pEGFP-N2 vector (Clontech) treated with the restriction enzymes in the same manner. The expression plasmid of interest was extracted using FastGene Xpress Plasmid PLUS Kit (NIPPON Genetics) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared plasmid is designated as pEGFP-N2-ovPD-1.











Primer (ovPD-1-EGFP F):  



(SEQ ID NO: 221)



GAAGATCTATGGGGACCCCGCGGGCGCCG






Primer (ovPD-1-EGFP R):  



(SEQ ID NO: 222)



GACCCGGGGAGGGGCCAGGAGCAGTGTCC






COS-7 cells were subcultured at a density of 5×104 cells/cm2 in 6-well plates, and then cultured overnight in RPMI 1640 medium containing 10% inactivated fetal bovine serum (Invitrogen) and 0.01% L-glutamine (Life Technologies) at 37° C. in the presence of 5% CO2. The pEGFP-N2-ovPD-1 or pEGFP-N2 (negative control) was introduced into COS-7 cells at 0.4 μg/cm2 using Lipofectamine 2000 (Invitrogen). The cells were cultured for 48 hours (ovPD-1-EGFP expressing cells). In order to confirm the expression of ovine PD-1 in the thus prepared expressing cells, intracellular localization of EGFP was visualized with an all-in-one fluorescence microscope BZ-9000 (KEYENCE).


1.3. Reactivity of Rat Anti-Bovine PD-1 Antibody 5D2 with Ovine PD-1 (FIG. 66)


It was confirmed by flow cytometry that rat anti-bovine PD-1 monoclonal antibody cross-reacts with ovine PD-1. Ovine PD-1-EGFP expressing COS-7 cells were blocked with 10% inactivated goat serum (Invitrogen)-supplemented PBS at room temperature for 15 min and reacted with 10 μg/ml of rat anti-bovine PD-1 antibody 5D2 at room temperature for 30 min. After washing, the cells were reacted with APC-labeled anti-rat Ig goat antibody (Beckman Coulter) at room temperature for 30 min. As a negative control antibody, rat IgG2a (κ) isotype control (BD Bioscience) was used. For analysis, FACS Verse (BD Bioscience) was used. For every washing operation and dilution of antibodies, 1% bovine serum albumin (Sigma-Aldrich)-supplemented PBS was used.


The experimental results are shown in FIG. 66. It was confirmed that rat anti-bovine PD-1 antibody 5D2 binds to ovine PD-1 expressing cells.


1.4. Reactivity of Rat Anti-Bovine PD-1 Antibody 5D2 with Water Buffalo Lymphocytes (FIG. 67)


Peripheral blood mononuclear cells (PBMCs) were isolated from peripheral blood of water buffalo (Bubalus ubalis; Asian water buffalo) by density gradient centrifugation using Percoll C Healthcare). The isolated water buffalo PBMCs were suspended in RPMI 1640 medium (Sigma-Aldrich) containing 10% inactivated fetal bovine serum (Cell Culture Technologies), penicillin 200 U/ml, streptomycin 200 μg/ml and 0.01% L-glutamine (Life Technologies). Cell density was adjusted to 2×106 cells/ml. To these PBMCs, phorbol 12-myristate acetate (PMA) 20 ng/ml and ionomycin 1 μg/ml (Sigma-Aldrich) were added, followed by a 2-day culture at 37° C. under 5% CO2. Cultured PBMCs were harvested and blocked with 10% inactivated goat serum (Invitrogen)-supplemented PBS at room temperature for 15 min. Then, rat anti-bovine PD-1 antibody 5D2 and mouse anti-bovine CD8 antibody (38.65, AbD Serotec) were reacted at room temperature for 30 min. As a negative control, rat IgG2a (κ) isotype control (BD Bioscience) was used. After washing, APC-labeled goat anti-rat Ig antibody (Beckman Coulter) and PE-labeled goat anti mouse IgG antibody (Beckman Coulter) were reacted at room temperature for 30 min. After further washing, Alexa Flour488-labeled mouse anti-bovine CD4 antibody (CC30, AbD Serotec) and PE/Cy7-labeled anti-bovine IgM mouse antibody (IL-A30, AbD Serotec) were reacted at room temperature for 30 min. For antibody labeling, Zenon Mouse IgG1 Labeling Kits (Life Technologies) or Lightning-Link Kits (Innova Biosciences) was used. For analysis, FACS Verse (BD Biosciences) was used. For every washing operation and dilution of antibodies, 10% inactivated goat serum (Invitrogen)-supplemented PBS was used.


The experimental results are shown in FIG. 67. Rat anti-bovine PD-1 antibody 5D2 strongly bound to water buffalo CD4+ T cells (IgM-CD4+) and CD8+ T cells (IgM-CD8+) that had been activated by PMA/ionomycin stimulation.


[Example 7] Binding to Bovine Fcγ Receptors of Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody Having Wild-Type or Mutated Bovine IgG1
1. Introduction

The present inventors have established a rat-bovine chimeric anti-bovine PD-1 antibody in Example 5 with a view to establishing a novel therapy for bovine infections. In the process, mutations were added to putative binding sites for Fcγ receptors in bovine IgG1 CH2 domain in order to suppress ADCC activity mediated by the chimeric antibody (FIGS. 1 and 11). In the subject Example, in order to examine the effect of these amino acid mutations, the present inventors prepared rat-bovine chimeric anti-bovine PD-1 antibodies having mutated bovine IgG1 (“IgG1 ADCC—” described above) and wild-type bovine IgG1 (“IgG1 WT”), respectively, and confirmed their binding to known bovine Fcγ receptors.


2. Materials, Methods and Experimental Results
2.1 Preparation of Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody Expressing Vector

Rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 having wild-type bovine IgG1 (IgG1 WT) or mutated bovine IgG1 (IgG1 ADCC—described above) was established.


An expression plasmid encoding rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 having mutated bovine IgG1 (IgG1 ADCC—) was prepared according to the procedures described in Example 5 (SEQ ID NOS: 157 and 158 (amino acid sequences), SEQ ID NOS: 162 and 163 (nucleotide sequences after codon optimization)). It should be noted that in order to suppress ADCC activity, the bovine IgG1 used in ch5D2 IgG1 ADCC—had mutations added to the putative binding sites for Fcγ receptors in CH2 domain (see FIGS. 1 and 11 for amino acid numbers and mutations: 251 E->P, 252 L->V, 253 P->A, 254 G->deletion, 348 A->S, 349 P->S; Ikebuchi R, Konnai S, Okagawa T, Yokoyama K, Nakajima C, Suzuki Y, Murata S, Ohashi K. Immunology, 142(4):551-561; August 2014). Hereinafter, the thus prepared plasmid is designated as pDN112-boPD-1ch5D2 IgG1 ADCC—.


An expression plasmid encoding rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 having wild-type IgG1 (IgG1 WT) was prepared according to the procedures described below. First, in order to amplify the gene encoding the constant region of wild-type bovine IgG1 (GenBank accession number X62916), PCR was performed using a synthesized bovine PBMC-derived cDNA as a template and designed primers that have NheI and XbaI recognition sites added on the 5′ side (boIgG1 CH1 F and boIgG1 CH3 R). The amplified gene strand was digested with NheI (Takara) and XbaI (Takara), purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics), and cloned into pDN112-boPD-1ch5D2 IgG1 ADCC—that had been treated with the restriction enzymes in the same manner. Further, the resultant plasmid was purified with QIAGEN Plasmid Midi kit (Qiagen) and digested with Nod (Takara) and XbaI (Takara) to thereby obtain an expression cassette for ch5D2's light chain (SEQ ID NO: 157 (amino acid sequence), SEQ ID NO: 162 (nucleotide sequence)) and heavy chain (IgG1 WT) (SEQ ID NO: 223 (amino acid sequence), SEQ ID NO: 224 (nucleotide sequence)). This gene fragment was purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics) and cloned into the cloning site (Nod and XbaI restriction enzyme recognition sequences downstream of PCMV and between INRBG and PABGH) of expression vector pDC6 (kindly provided by Prof. S. Suzuki, Hokkaido University Research Center for Zoonosis Control) (FIG. 69). The resultant expression plasmid of interest was extracted with QIAGEN Plasmid Midi kit (Qiagen) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared expression plasmid is designated as pDC6-boPD-1ch5D2 IgG1 WT.











Primer (boIgG1 CH1 F):



(SEQ ID NO: 225)



CTAGCTAGCACCACAGCCCCGAAAGTCT






Primer (boIgG1 CH3 R): 



(SEQ ID NO: 226)



TGCTCTAGATTATTTACCCGCAGACTTAGA






2.2. Expression and Purification of Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody

Thirty micrograms of pDC6-boPD-1ch5D2 IgG1 WT or pDN112-boPD-1ch5D2 IgG1 ADCC—was introduced into 7.5×107 Expi293F cells (Life Technologies) using Expifectamine (Life Technologies) and the transfected cells were then cultured under shaking for 5 to 7 days, followed by collection of a culture supernatant. Each chimeric antibody was purified from the culture supernatant using Ab Capcher Extra (ProteNova). An open column method was used for binding to resin; 1.5 M Glycine/3 M NaCl (pH 8.0) was used as equilibration buffer and wash buffer. As elution buffer, 0.1 M Glycine-HCl (pH 2.8) was used. As neutralization buffer, 1M Tris (pH 9.0) was used. The purified antibody was subjected to buffer exchange with PBS (pH 7.4) using PD-10 Desalting Column (GE Healthcare) and concentrated using Amicon Ultra-15 (50 kDa, Millipore). The thus purified chimeric antibody was passed through a 0.22 μm syringe filter (Pall Life Science) for sterilization and stored at 4° C. until use in experiments. The concentration of each chimeric antibody as purified was quantitatively determined with the absorbance (280 nm) measured with Nanodrop8000 Spectrophotometer (Thermo Fisher Scientific).


2.3. Confirmation of the Purity of Purified Rat-Bovine Chimeric Anti-Bovine PD-1 Antibodies (FIG. 70)

In order to confirm the purity of purified rat-bovine chimeric anti-bovine PD-1 antibodies (ch5D2 IgG1 WT and ch5D2 IgG1 ADCC—), antibody proteins were detected by SDS-PAGE and CBB staining. Each chimeric antibody purified was suspended in Laemmli Sample Buffer (Bio-Rad) and denatured at 95° C. for 5 min under reducing conditions (reduced with 2-mercaptoethaanol; Sigma-Aldrich) or under non-reducing conditions. The thus prepared samples were electrophoresed using SuperSep Ace 5%-20% gradient polyacrylamide gel (Wako). As molecular weight markers, Precision Plus Protein All Blue Standards (Bio-Rad) were used. After electrophoresis, the gel was stained with Quick-CBB kit (Wako) and decolored in distilled water.


The results are shown in FIG. 70. Bands of ch5D2IgG1 WT and ch5D2 IgG1 ADCC—were observed at predicted positions, that is, at 25 kDa (light chain) and 50 kDa (heavy chain) under reducing conditions and at 150 kDa under non-reducing conditions.


2.4. Construction of Soluble Bovine Fcγ Receptors (FcγRs)

Bovine FcγRI-His, FcγRII-His, FcγRIII-His and Fcγ2R-His expressing plasmids were constructed according to the procedures described below. In order to amplify the signal peptide and the extracellular region of bovine FcγRI, FcγRII, FcγRIII and Fcγ2R (GenBank accession numbers NM_174538, NM_174539, NM_001077402 and NM_001001138), primers were designed which had NotI and XhoI recognition sites added on the 5′ side (boFγyRI-His F and R; boFγyRIII-His F and R; or boFcγ2R-His F and R) or NheI and EcoRV recognition sites added on the 5′ side (boFcγRIII-His F and R). A gene sequence encoding a 6xHis tag was added to reverse primers. PCR was performed using a synthesized bovine PBMC-derived cDNA as a template. The respective PCR products were digested with Nod (Takara) and XhoI (Takara) (FcγRI-His, FcγRIII-His and Fcγ2R-His) or NheI (Takara) and EcoRV (Takara) (FcγRII-His), purified with FastGene Gel/PCR Extraction Kit (NIPPON Genetics) and cloned into pCXN2.1(+) vector (Niwa H, Yamamura K, Miyazaki J. Gene, 108(2):193-199; Dec. 15, 1991; kindly provided by Dr. T. Yokomizo, Juntendo University Graduate School of Medicine). The resultant expression plasmids were purified with FastGene Xpress Plasmid PLUS Kit (NIPPON Genetics) and stored at −30° C. until use in experiments. Hereinafter, the thus prepared expression plasmid is designated as pCXN2.1-boFcγRI-His, pCXN2.1-boFcγRII-His, pCXN2.1-boFcγRIII-His or pCXN2.1-boFcγ2R-His.









Primer (boFcγRI-His F): 


(SEQ ID NO: 227)


ATAAGAATGCGGCCGCCACCATGTGGCTCATAATAGCTCT





Primer (boFcγRI-His R):


(SEQ ID NO: 228)


GCCCTCGAGTTAATGGTGATGGTGATGGTGAGGAGTTGTTGACTGGAGGC 





Primer (boFcγRII-His F): 


(SEQ ID NO: 229)


ATAAGAATGCTAGCCACCATGGGGATCCCCTCATTCCT





Primer (boFcγRII-His R):


(SEQ ID NO: 230)


GCCGATATCTTAATGGTGATGGTGATGGTGCGATGAGGGGCCGCTCGAGC 





Primer (boFcγRIII-His F): 


(SEQ ID NO: 231)


ATAAGAATGCGGCCGCCACCATGTGGCAACTGCTACCACC





Primer (boFcγRIII-His R):


(SEQ ID NO: 232)


GCCCTCGAGTTAATGGTGATGGTGATGGTGGTGCCAAGGTAGAAAGAATG 





Primer (boFcγ2R-His F):


(SEQ ID NO: 233)


ATAAGAATGCGGCCGCCACCATGGCCCCCACCCTCCCTGCCTTGCTCT 





Primer (boFcγ2R-His R):


(SEQ ID NO: 234)


GCCCTCGAGTTAATGGTGATGGTGATGGTGATTCTGCATCGTGTAGTCTG 






Soluble bovine FcγRI-His, FcγRII-His, FcγRIII-His and Fcγ2R-His expressing cells were prepared according to the procedures described below. Briefly, 30 μg of pCXN2.1-boFcγRI-His, pCXN2.1-boFcγRII-His, pCXN2.1-boFcγRIII-His or pCXN2.1-boFcγ2R-His was introduced into 7.5×107 Expi293F cells (Life Technologies) using Expifectamine (Life Technologies) and the transfected cells were then cultured under shaking for 5 to 7 days, followed by collection of a culture supernatant. Recombinant proteins were purified from the culture supernatant using TALON Metal Affinity Resin (Clontech). After purification, the buffer was exchanged with PBS (pH 7.4) using Amicon Ultra-15 Centrifugal Filter Unit (10 kDa, Millipore), and the recombinant proteins were stored at −30° C. until use in experiments (bovine PD-1-His). The concentrations of purified bovine FcγRI-His, FcγRII-His, FcγRIII-His and Fcγ2R-His were quantitatively determined in terms of the absorbance (280 nm) measured with Nanodrop8000 Spectrophotometer (Thermo Fisher Scientific).


2.5. Binding to Bovine FcγRs of Rat-Bovine Chimeric Anti-Bovine PD-1 Antibody ch5D2 IgG1 WT and IgG1 ADCC—(FIG. 71)


Rat-bovine chimeric anti-bovine PD-1 antibody ch5D2 IgG1 WT or IgG1 ADCC—was immobilized on Nunc MaxiSorp ELISA plates (Nunc) at a final concentration of 50, 25, 12.5, 6.25, 3.12 or 1.5610 nM at 37° C. for 2 hr. Subsequently, each well was washed with 200 μl of 0.05% Tween 20-supplemented PBS (PBS-T) five times, followed by blocking with SuperBlock (PBS) Blocking Buffer (Thermo Fisher Scientific) at 37° C. for 30 min. Each well was washed again in the same manner. Then, bovine FcγRI-His, FcγRII-His, FcγRIII-His or Fcγ2R-His was added to each well at a final concentration of 10 μg/ml and reacted at 37° C. for 1 hr. After washing, anti-polyhistidine tag mouse monoclonal antibody (Abcam) was reacted at 37° C. for 30 min. Subsequently, each well was washed, and horseradish peroxidase-labeled anti-mouse IgG goat polyclonal antibody (MP Biomedicals) was reacted at 37° C. for 30 min. Each well was washed again, and then TMB One Component Substrate (Bethyl) was added for coloring. Thereafter, the enzyme reaction was terminated with 0.18 M dilute sulfuric acid, and absorbance (450 nm) was measured with Microplate Reader MTP-900 (Corona Electric). For every plate washing operation, Auto Plate Washer BIO WASHER 50 (DS Pharma Biomedical) was used.


The experimental results are shown in FIG. 71. IgG1 WT strongly bound to bovine FcγRI-His and weakly bound to bovine FcγRII-His. On the other hand, IgG1 ADCC—did not bind to bovine FcγRI-His or FcγRII-His. Neither IgG1 WT nor IgG1 ADCC—bound to bovine FcγRIII-H is or Fcγ2R-His.


All publications, patents and patent applications cited herein are incorporated herein by reference in their entirety.


INDUSTRIAL APPLICABILITY

The anti-PD-L1 antibody of the present disclosure is applicable to prevention and/or treatment of cancers and infections in animals. Further, the pharmaceutical composition of the present disclosure comprising a COX-2 inhibitor and an inhibitor targeting PD-1/PD-L1 is applicable to prevention and/or treatment of cancer and/or infection.

Claims
  • 1. A pharmaceutical composition which comprises a COX-2 inhibitor and is administered before, after or simultaneously with the administration of an inhibitor targeting PD-1/PD-L1.
  • 2. The pharmaceutical composition of claim 1, wherein the inhibitor targeting PD-1/PD-L1 is an antibody.
  • 3. The pharmaceutical composition of claim 1, wherein the antibody is at least one antibody selected from the group consisting of anti-PD-1 antibody and anti-PD-L1 antibody.
  • 4. The pharmaceutical composition of claim 1, wherein the COX-2 inhibitor is at least one compound selected from the group consisting of meloxicam, piroxicam, celecoxib, firocoxib, robenacoxib, carprofen and etodolac.
  • 5. The pharmaceutical composition of claim 1 for use in prevention and/or treatment of cancer and/or infection.
  • 6. The pharmaceutical composition of claim 1, wherein the inhibitor targeting PD-1/PD-L1 and the COX-2 inhibitor are administered separately.
  • 7. The pharmaceutical composition of claim 1, which is a combination drug comprising the inhibitor targeting PD-1/PD-L1 and the COX-2 inhibitor.
  • 8. (canceled)
  • 9. A method of preventing and/or treating cancer and/or infection, comprising administering to a human or animal subject a pharmaceutically effective amount of a COX-2 inhibitor before, after or simultaneously with the administration of an inhibitor targeting PD-1/PD-L1.
  • 10. An anti-PD-1 antibody comprising (a) a light chain comprising a light chain variable region containing CDR1 having the amino acid sequence of QSLEYSDGYTY (SEQ ID NO: 16), CDR2 having the amino acid sequence of GVS and CDR3 having the amino acid sequence of FQATHDPDT (SEQ ID NO: 165) and the light chain constant region of an antibody of an animal other than rat; and (b) a heavy chain comprising a heavy chain variable region containing CDR1 having the amino acid sequence of GFSLTSYY (SEQ ID NO: 166), CDR2 having the amino acid sequence of IRSGGST (SEQ ID NO: 167) and CDR3 having the amino acid sequence of ARTSSGYEGGFDY (SEQ ID NO: 168) and the heavy chain constant region of an antibody of an animal other than rat.
  • 11. The antibody of claim 10, wherein the light chain variable region and the heavy chain variable region are derived from rat.
  • 12. The antibody of claim 11, wherein the light chain variable region is the light chain variable region of a rat anti-bovine PD-1 antibody and the heavy chain variable region is the heavy chain variable region of a rat anti-bovine PD-1 antibody.
  • 13. The antibody of claim 12, wherein the light chain variable region has the amino acid sequence as shown in SEQ ID NO. 149 and the heavy chain variable region has the amino acid sequence as shown in SEQ ID NO: 150.
  • 14. The antibody of claim 10, wherein the light chain constant region of an antibody of an animal other than rat has the amino acid sequence of the constant region of lambda chain or kappa chain.
  • 15. The antibody of claim 10, wherein the heavy chain constant region of an antibody of an animal other than rat has the amino acid sequence of the constant region of an immunoglobulin equivalent to human IgG4, or has mutations introduced thereinto that reduce ADCC activity and/or CDC activity.
  • 16. The antibody of claim 15, wherein the animal other than rat is bovine; the light chain constant region of the bovine antibody has the amino acid sequence of the constant region of lambda chain; and the heavy chain constant region of the bovine antibody has mutations introduced thereinto that reduce ADCC activity and/or CDC activity.
  • 17. The antibody of claim 16, wherein the light chain constant region of the bovine antibody has the amino acid sequence as shown in SEQ ID NO: 151 and the heavy chain constant region of the bovine antibody has the amino acid sequence as shown in SEQ ID NO: 152.
  • 18. The antibody of claim 10 which has a four-chain structure comprising two light chains and two heavy chains.
  • 19. A pharmaceutical composition comprising the antibody of claim 10 as an active ingredient.
  • 20. The composition of claim 19 for prevention and/or treatment of cancers and/or inflammations.
  • 21-27. (canceled)
Priority Claims (4)
Number Date Country Kind
2016-159088 Aug 2016 JP national
2016-159089 Aug 2016 JP national
2017-061454 Mar 2017 JP national
2017-110723 Jun 2017 JP national
Continuations (2)
Number Date Country
Parent 17579517 Jan 2022 US
Child 18914727 US
Parent 16325040 Feb 2019 US
Child 17579517 US