Antigen Imitating Extracellular Areas of Membrane Proteins of Type III Produced from Intracellular Pathogenic Micro-Organisms, Derived Conformational Antibodies and the Use Thereof

Abstract
The inventive antigen derived from an intracellular pathogenic micro-organism is characterised in that it comprises at least on peptidic fragment which essentially consists of the concatenation of sequences of at least two extracellular adjacent areas in the native structure of a membrane protein of type III of said intracellular pathogenic micro-organism, derived conformational antibodies and the application thereof.
Description

Besides the above arrangements, the invention also comprises other arrangements that will emerge from the following description, which refers to examples of use of the antigens and of the antibodies according to the present invention, and also to table I summarizing the sequences of the application, in which the sequences corresponding to the extracellular domains are indicated in bold, the sequences corresponding to the linking fragment are boxed in, and the amino acids derived from the transmembrane domains are underlined, and to the attached drawings in which:



FIG. 1 illustrates the various types of latency (types I, II and III, and optionally type IV) associated with EBV infections; the expression profile of the viral and cellular genes and the pathologies associated with each type of latency are indicated;



FIG. 2 illustrates the comparative analysis of the structure and of the immunogenicity (presence of protective antibodies) of various types of viral and bacterial membrane proteins (type I: immunogenic and types III and V nonimmunogenic);



FIG. 3 illustrates the structure of the antigens according to the invention, taking, as an example, those derived from the EBV LPM1 and LMP2A proteins. ED: extracellular domain. TM: transmembrane domain. ID: intracellular domain;



FIG. 4 illustrates the lipid vesicles that form spontaneously from the lipopeptides according to the invention: Cys (cholesteryl) derived from the peptides of sequence SEQ ID Nos 13 and 14. A: Coomassie blue staining. B: oil red staining;



FIG. 5 illustrates the evolution of the anti-LMP1 serum antibody titer in 4 mice (mouse 1 to mouse 4) immunized with the peptide antigen SEQ ID No. 10 (ED1+ED2 of LMP1) coupled to KLH; the serum antibodies were assayed by ELISA with the corresponding peptide (SEQ ID No. 10), on days D21, D42, D63 and D84, i.e. three weeks after each of the 4 successive injections of antigen: mouse 1: —⋄—, mouse 2: —˜—; mouse 3: —Δ—, mouse 4: —∘—;



FIG. 6 illustrates the analysis of the specificity of the anti-LMP1 mouse immune sera (mouse immunized with the peptide antigen SEQ ID No. 10 (ED1+ED2) coupled to KLH), measured by indirect ELISA, by competition assay with the corresponding peptide (SEQ ID NO. 10) or with a non-relevant peptide (SEQ ID No. 12, ED1+ED3). The results are expressed, for each of the sera taken at D21 (3.1), D42 (2.1) and D63 (1.1), by the ratio (A/AO) of the absorbent values in the presence or in the absence of competitor peptide, as a function of the molar concentration (ao) of the competitor peptide (ED1+ED2) or (ED1+ED3). Competition with the peptide SEQ ID No. 10: 3.1: —l579 —, 2.1: —♦— and 1.1: —⊕—. Competition with the peptide SEQ ID No. 12: 3.1: ——, 2.1: and 1.1: —66 —;



FIG. 7 illustrates the determination, by linear regression from the curve of FIG. 6, of the affinity constant (Ka) of the antibodies of the anti-LMP1 mouse immune sera. The Ka values correspond, respectively, to 7.3 nM, 20.8 nM and 557 nM for the sera 3.1 (—▪—), 2.1 (—♦—) and 1.1: (—⊕—);



FIGS. 8 and 9 illustrate the detection, by immunocytochemistry using the mouse immune sera specific for the LMP1 extracellular domains, of the native LMP1 protein present at the surface of cells having suffered latent infection with EBV. The cells are fixed in PBS buffer containing 4% formaldehyde and the LMP1 protein is detected as described in examples 1.7 and 4;



FIG. 8A illustrates the detection of the native LMP1 protein on lymophoblastoid cell lines transformed with EBV (B.LCL-EBV); all the cells are in type III latency and express LMP1, which is detected on all the cells;



FIG. 8B illustrates the detection of the LMP1 protein on the B95.8 line of B lymphocytes infected with EBV; 40% to 50% of the cells which are in the lytic phase do not express LMP1 (small unlabeled cells), whereas a subpopulation of cells expresses the type III latency antigens, including LMP1 (labeled cells indicated with arrows);



FIG. 9 (9A, 9B and 9C) illustrates the detection of the native LMP1 protein on PBMCs from healthy, EBV-positive carriers; only a few B lymphocytes are infected and are therefore detectable in these healthy carriers. The detection threshold is at least 1 to 2 LMP1-positive cells per 150 000 to 200 000 PBMCs from healthy EBV-positive carriers;



FIG. 10 illustrates the detection by immunoprecipitation of the native LMP1 protein in HEK-293 cells transfected with a vector for expression of the LMP1 protein (pSV-HA-LMP1), using the mouse immune sera specific for the LMP1 extracellular domains according to the invention (anti-peptide Is), by comparison with a commercial mouse monoclonal antibody that recognizes an intracellular domain of LMP1 (CS1-4). HEK-293 cells transfected with the vector pSV5 are used as a control (control HEK 293). Lane 1: control HEK 293 on which immunoprecipitation is performed with the anti-LMP1 mouse immune serum. Lane 2: control HEK 293 on which immunoprecipitation is performed with the CS1-4 antibody. Lane 3: HEK 293 transfected with pSV-HA-LMP1, on which immunoprecipitation is performed with the anti-LMP1 mouse immune serum. Lane 4: HEK 293 transfected with pSV-HA-LMP1, on which immunoprecipitation is performed with CS 1-4 antibody. The positions of the molecular weight markers are indicated;



FIG. 11 illustrates the cytotoxic activity and the pro-apoptotic activity of the mouse immune sera specific for the LMP extracellular domains on a B lymophoblastoid cell line having suffered latent infection with EBV (B.LCL-EBV or LCL). A, C and E: LCLs incubated for, respectively, 4 days in the presence of complement alone [normal rabbit serum (nonimmune serum, not heat-inactivated), 1/60th dilution]. B, D and F: LCLs incubated for 4 days in the presence of the same concentration of complement and of increasing concentrations of anti-LPM1 immune serum ( 1/600th, 1/300th and 1/200th dilution). With the LCLs incubated in the presence of complement and with the lowest dilution of anti-LMP1 immune serum (F), considerable cell lysis is observed, which reflects, in terms of the analysis of the cell cycle, a very substantial increase in the proportion of cells in apoptosis (+30%), compared with the control (A, C and E);



FIG. 12 illustrates the comparison of the mean affinities of the mouse (BALB/c) and rat (LOU/M) immune sera after three booster immunizations with the peptide antigen SEQ ID No. 16 (ED2+ED3 of LMP2A) coupled to KLH;



FIG. 13 illustrates the detection, by immunocytochemistry using rat immune sera specific for the extracellular domains of LMP2A, of the native LMP2A protein present at the surface of an HEK-293 line stably transfected with the expression vector pREP4-LMP2A. The cells are fixed in PBS buffer containing 4% formaldehyde and the LMP2A protein is detected as described in example 8;



FIG. 14 illustrates the detection, by immunocytochemistry using immune sera specific for the extracellular domains of LMP1 and LMP2A, of the native LMP1 and LMP2A proteins present at the surface of the EBV+E1 and NC5 lines. The cells are fixed in PBS buffer containing 4% formaldehyde and the LMP1 and LMP2A proteins are detected as described in examples 1.7, 4 and 8 (magnification: ×400);



FIG. 15 represents the survival curve of SCID mice injected with 3 million E1 cells, and then treated with an anti-LMP2A serum or a normal serum;



FIG. 16 illustrates the detection, by immunocytochemistry using the immune serum specific for the extracellular domains of LMP1, of the native LMP1 protein present at the surface of the Sp2o line stably transfected with the vector pREP4-LMP1. The anti-LMP2A antibody is used as a control. The cells are fixed in PBS buffer containing 4% formaldehyde and the labeling with the antibodies is visualized as described in examples 1.7, 4 and 8. a and b: labeling with the anti-LMP1 antibody produced as described in example 2, respectively at magnification×400 and ×200. c and d: labeling with the anti-LMP2A antibody produced as described in example 8, respectively at magnification ×400 and ×200;



FIG. 17 illustrates the inhibition of tumors expressing LMP1 (Sp2o-pREP4LMP1 line) in the mice immunized with the peptide antigen that mimics the extracellular domains (ED1+ED2; SEQ ID No. 10) of LMP1, by comparison with the control mice given an injection of KLH. The mice of the control group (KLH: n=21) and a first group (n=10) of mice immunized with the LMP1 antigen were given a subcutaneous injection of one million Sp2o-pREP4-LMP1 cells. A second group of mice immunized with the LMP1 antigen (n=10) was given a subcutaneous injection of three million Sp2o-pREP4-LMP1 cells.










TABLE I







List of the peptides derived from the LMP1 or



LMP2 proteins











Identifier


Extracellular



No.
Sequence
Positions
Domain (ED)





SEQ ID No: 1
SDWTGGA
Positions 45 to 51 of LMP1*
LMP1-ED1






SEQ ID No: 2
WNLHGQA
Positions 98 to 104 of LMP1*
LMP1-ED2





SEQ ID No: 3
LQQNWN
Positions 160 to 165 of
LMP1-ED3




LMP1*





SEQ ID No: 4
SCFTASVS
Positions 142 to 149 of
LMP2-ED1




LMP2**





SEQ ID No: 5
RIEDPPFNS
Positions 199 to 207 of
LMP2-ED2




LMP2**





SEQ ID No: 6
DAVLQLS
Positions 260 to 266 of
LMP2-ED3




LMP2**





SEQ ID No: 7
GTLN
Positions 317 to 320 of
LMP2-ED4




LMP2**





SEQ ID No: 8
SILQTNFKSLSSTEFIPN
Positions 374 to 391 of
LMP2-ED5




LMP2**





SEQ ID No: 9
SNTLLS
Positions 444 to 449 of
LMP2-ED6




LMP2**





SEQ ID No: 10

MSDWTGGALLWNLHGQAL

Positions 44 to 51 and 97
LMP1-




to 105 of LMP1*
(ED1 + ED2)





SEQ ID No: 11

LWNLHGQALLYLQQNWWT

Positions 97 to 105 and
LMP1-




155-166 of LMP1*
(ED2 + ED3)





SEQ ID No: 12

MSDWTGGALLYLQQNWWT

Positions 44 to 51 and
LMP1-




158-166 of LMP1
(ED1 + ED3)





SEQ ID No: 13


MSDWTGGALLWNLHGQAL

Positions 44 to 51, 97 to
LMP1-




YLQQNWWT

105 and 159-166 of LMP1*
(ED1 + ED2 +





ED3)





SEQ ID No: 14

MSDWTGGALLWNLHGQALL

Positions 44 to 51, 97 to
LMP1-




YLQQNWWT

105 and 158-166 of LMP1*
(ED1 + ED2 +





ED3)





SEQ ID No: 15

ASSFTASVSTTWRIEDPPFNSL

Positions 141 to 150 and
LMP2




197 to 208 of LMP2**
(ED1 + ED2)





SEQ ID No: 16

TWRIEDPPFNSLVDAVLQLSPL

Positions 197 to 208 and
LMP2




259 to 268 of LMP2**
(ED2 + ED3)





SEQ ID No: 17

IVDAVLQLSPLILGTLNLTTM

Positions 258 to 270 and
LMP2




317 to 324 of LMP2**
(ED3 + ED4)





SEQ ID No: 18

ILGTLNLTTMGGSILQTNFKSLS

Positions 315 to 324 and
LMP2



STEFIPNL
372 to 392 of LMP2**
(ED4 + ED5)





SEQ ID No: 19

GGSILQTNFKSLSSTEFIPNLV

Positions 372 to 392 and
LMP2




MSNTLLSAW

443 to 451 of LMP2**
(ED5 + ED6)





SEQ ID No: 20

ASSFTASVSTTWRIEDPPFNSL

Positions 141 to 150,
LMP2





VDAVLQLSPL

197 to 208 and 259 to
(ED1 + ED2 +




268 of LMP2**
ED3)





SEQ ID No: 21

TWRIEDPPFNSLVDAVLQLSPL

Positions 197 to 208 and
LMP2





ILGTLNLTTM

259 to 268 and 315 to
(ED2 + ED3 +




324 of LMP2**
ED4)





SEQ ID No: 22

VDAVLQLSPLILGTLNLT

Positions 259 to 268 and
LMP2





GGSILQTNFKSLSSTEFIPNL

315 to 322 and 372 to
(ED3 + ED4 +




392 of LMP2**
ED5)





SEQ ID No: 23

ILGTNLTGGSILQTNFKSLSST

Positions 315 to 322,
LMP2



EFIPNLVMSNTLLSAW
372 to 392 and 443 to
(ED4 + ED5 +




TWRIEDPPFNSLVDAVLQLSPL

451 of LMP2** Positions
ED6) LMP2




197 to 208 and 259 to
(ED2 + ED3)




268 of LMP2**





SEQ ID No: 24
VMSDWT
Positions 43 to 48 of
LMP1-ED1




LMP1*





SEQ ID No: 25
NLHGQA
Positions 99 to 104 of
LMP1-ED2




LMP1*





SEQ ID No: 26

LQQN

Positions 160 to 163 of
LMP1-ED3




LMP1*





*SwissProt P03230


**SwissProt P13285









EXAMPLE 1
Material and Methods

1) Animals


Four week-old female BALB/c mice (Iffa-Credo) are fed at will and immunized at the age of 7 to 10 weeks.


2) Antigens


Peptides derived from the extracellular domains of LMP1 and LMP2A were solid-phased synthesized manually, according to the method originally described by Merrifield et al. (J. Am. Chem. Soc., 1964, 85: 2149-) (1964)), using the Fmoc/tert-Butyl chemistry strategy on a 0.1 mmol scale. The various protected amino acids (Fmoc-L-aa; Novabiochem) are sequentially attached to Rink amide resin (Applied Biosystem) after activation for 3 min with HATU (O-(7-azabenzotriazol-1-yl)-N,N,N′,N′-tetramethyluronium hexafluorophosphate), according to the method of Miranda and Alewood (P.N.A.S., 1999, 96: 1881-1186) in the presence of a 5-fold excess of DIEA (diisopropylethylamine). In situ neutralization during the coupling gives better degrees of acylation and in a minimum amount of time. The coupling efficiency is controlled by means of a TNBS (trinitrobenzenesulfonic acid) test. If the test is positive, a second coupling is carried out, followed by an acetylation for 5 min with a 3:0.3:96.7 mixture of Ac2-DIEA-CH2Cl2, and then by 3 washes for one minute with CH2Cl2 (chloroform) and then with NMP (N-methylpyrrolidone). The Fmoc protective groups are cleaved before each coupling, with a solution of NMP containing 20% piperidine. At the end of synthesis, the resin is washed with diethyl ether and dried. The peptide is cleaved from the resin and deprotected using a TFA (trifluoroacetic acid)-H20-EDT-Pr3SiH mixture (92.5:2.5:2.5:2.5; 15 ml) for 2 hours at ambient temperature, precipitated from cold diethyl ether, centrifuged, washed in cold diethyl ether, recentrifuged, dissolved in water and, finally, lyophilized to give a crude peptide extract. The crude peptide is purified by HPLC on a semi-preparative reverse-phase column (C18 column). The purity of the peptides is always greater than 95% and their identity is confirmed by mass spectrometry (positive MALDI-TOF-MS) and analytical HPLC. The peptide sequences synthesized (SEQ ID Nos 10 to 16) corresponding to the domains of LMP1 (Swiss Protein Databank number P03230) and LMP2A (Swiss Protein Database number P13285) are given in table I in the one-letter-code form.


3) Immunization


a) Peptides Coupled to a Carrier Protein (KLH)


The LMP1-derived peptides containing only one exogenous cystein (SEQ ID Nos 10, 11, 12, 15, 16) were individually coupled to activated KLH (Imject maleimide-activated KLH®, Perbio) according to the supplier's protocol. Mice (4 animals per group) were injected subcutaneously in the flank, with an emulsion of peptide (50 μg in 0.1 ml H20) and of complete Freund's adjuvant (0.1 ml). On days 21, 42 and 62 following the first injection (D0), the animals are given a boost injection, by the same route, with the same amount of antigen but in incomplete Freund's adjuvant. Blood is taken by retro-orbital puncture before each injection, so as to determine the titer of serum antibodies specific for LMP1 and for LMP2A, by ELISA.


b) Peptides Coupled to a Lipid


The LMP1-derived peptides (SEQ ID Nos 10, 11, 13 and 14were individually coupled to one or more molecules of cholesterol or of palmitic acid, by means of a thioether (cholesterol) or thioester (palmitic acid) bond or bonds with the thiol function of their cysteine residue(s). The coupling of the peptide (5 mg/ml) via a thioether bond to activated cholesterol (bromoacetyl-cholesterol) is spontaneous in a medium of dimethylformamide (DMF)/phosphate buffer, pH 7.5 (95:5). The progression of the reaction is followed by acidification of the reaction medium and an analytical HPLC. The lipopeptide is purified by gel filtration in a 20% acetic acid medium. The palmitic acid is incorporated into the peptide chain by means of a thioester bond, during the peptide synthesis. The lipopeptide organizes itself spontaneously into vesicles (FIG. 4), which are washed by successive centrifugations in an aqueous medium. The mouse immunization protocol is the same as above, except that the Freund's adjuvant is replaced with Montanide®.


4) ELISA


Blood samples are taken, by retro-orbital puncture, from the immunized mice, and the sera are then recovered and frozen at −20° C. in 20-μl fractions. The wells of a microtitration plate (Maxisorp®, Nunc) are coated with 100 μl of peptide (1 mg/ml) overnight at +4° C. Plates coated with non-relevant peptides of the same molecular mass are used as a control. The wells are then washed with PBS buffer containing 0.5% of Tween 20 (PBS-T) and then blocked 1 h in the presence of PBS buffer containing 2% of powdered skimmed milk (PBS-SM). After washes in the same buffer as above, 100 μl of serum diluted in PBS-T-SM buffer (PBS, 0.05% Tween 20, 2% powdered skimmed milk) are added to the wells and the plates are incubated for 2 hours at 37° C. After four washes with PBS-T buffer, 100 μl of goat anti-mouse total immunoglobulins or anti-mouse IgG1, -mouse G2a, -mouse G2b and -mouse G3, secondary antibody, conjugated to peroxydase (BIORAD), diluted to 1/10 000 in PBS-T buffer, are added to each well and the plates are incubated for 1 h at 37° C. After thorough washing with PBS-T buffer, 100 μl of substrate (OPD: o-phenylenediamine dihydrochloride, Sigma) diluted in 0.05 M citrate buffer, pH 5.5, containing H202, are added to each well and the plates are incubated for 30 min at ambient temperature, in the dark. The reaction is stopped by adding 4N sulfuric acid, and the absorption at 492 nm is measured using an automatic microplate reader (Dynatech).


5) Competition Assay


The antigen-antibody binding specificity is measured by means of a competition assay, according to the method described by Friguet et al., (J. Immunol. Methods, 1985, 77: 309-309). The principle of the method is as follows: the affinity constants are determined by linear regression from the curves of displacement of the binding of the antibody to the antigen in solid phase (at constant concentration) by varying concentrations of the same antigen in the liquid phase. The first step consists of absorption of the antibody by the antigen or by a non-relevant peptide, in solution, and the second step consists in assaying, by an indirect ELISA assay, free antibodies when the antigen and the antibody are in equilibrium.


More specifically:


step 1: various concentrations of the peptide antigen or of a non-relevant peptide (10−11 to 10−5 M) are incubated with a fixed concentration of antibodies (serum diluted to 1/50), in PBS-T-SM buffer (PBS, 2% powdered skimmed milk, 0.05% Tween 20), for 18 h at 4° C.;


step 2: 100 μl of the product of the reaction obtained in step 1 are sampled and added to the wells of a microtitration plate coated beforehand with the peptide antigen (100 μg/well in NaHCO3 buffer, pH 9.6) and the plate is incubated for 1 h at 20° C. After washes with PBS-T buffer (PBS, 0.05% Tween 20), the immunoglobulins bound to the peptide antigen are detected using a goat anti-mouse total immunoglobulins secondary antibody coupled to peroxydase. The visualization of the reaction and the reading of the plates are carried out as for the ELISA assay.


6) Cell Culture


The human kidney embryonic cell line HEK-293 (ATCC CRL 1573) and the line transfected with the plasmid pSV-HA-LMP1, derived from the HEK-293 line, are cultured in 24-well plates in Dulbecco medium (GIBCO) supplemented with fetal calf serum (10%), glutamine (2 mM), nonessential amino acids (1%), sodium pyruvate (1 mM) and gentamycin (50 μg/ml). The plasmid pSV-HA-LMP1 derives from the plasmid pSV5 (STRATAGENE) through the cloning, under the control of the SV40 virus promoter, of an insert corresponding to the cDNA of LMP1 from the wild-type EBV strain B95.8. The other cells are cultured in RPMI medium supplemented as above. The EBV-infected marmoset B lymphocyte line B95.8 is used for the production of viral particles. The EBV-transformed B lymphocytes (B-EBVneo) and the LCLs (type III-latency EBV+ lymphoblastoidal cell lines) derived from human PMBCs by infection with a culture surnagent of the B95.8 line are obtained as described in Current Protocols in Immunology, 1991, Colingan J E, Kruisbeek A M, Margulies D H, Schevach E M, Strober W, Greene. The peripheral blood mononuclear cells (PBMCs) are purified by centrifugation of a blood sample on a Ficoll gradient. The human T lymphocytes Jurkat line and the EBV-negative Burkitt's lymphoma DG75 line are also used as controls.


7) Immunocytochemistry


The experiments are carried out on coverslips (cells in suspension) or in 24-well plates (adherent cells) using conventional immunocytochemistry techniques, employing a standard ABC protocol. More specifically, the adherence cells cultured in plates and the nonadherence cells cultured in suspension are washed with PBS, and then, only in the case of the cells in suspension, deposited onto a coverslip (100 μl at 106 cells/ml). The cells are then fixed (plates or coverslips) under nondenaturing conditions: incubation for 30 min in PBS buffer containing 4% formaldehyde, and then three washes for 1 min with PBS and, finally, blocking with 4% H202. In parallel, the cells are fixed under denaturing conditions: incubation for 30 min in PBS buffer containing 4% formaldehyde, and then denaturation by dehydration with increasing concentrations of ethanol (50°, 70°, 90°and 100°) and, finally, blocking with 4% H202.


The incubations with the primary and secondary antibodies are carried out either in PBS buffer containing 5% of powdered skimmed milk (cells fixed under nondenaturing conditions), with neither detergent nor any organic compound capable of inhibiting the binding of the antibody, or in PBS buffer containing 0.5% of Tween 20 or 0.05% of saponin (cells fixed under denaturing conditions). More specifically, the cells are first incubated for 45 min at ambient temperature, in the presence of a mouse immune serum specific for LMP1, prepared as described in example 1 and in example 2 (dilution to 1/1000th) and of a normal rabbit serum (dilution to 1/300th). The mouse antibodies are then labeled with a biotinylated rabbit antibody (SIGMA), according to the supplier's recommendations. After three washes with PBS, the biotine attached is detected using a peroxydase-coupled ABC enzymatic system (Axtravidin, SIGMA) and the reaction is then visualized with diaminobenzidine (SIGMA).


8) Analysis of proliferation and of the cell cycle An EBV-infected lymphoblastoidal cell culture (LCLs, 106 cells/ml) is distributed into a 6-well plate (106 cells/well) and the cells are then incubated for 4 days in RPMI medium containing non-decomplemented normal rabbit serum (dilution to 1/60th). Alternatively, the cells are incubated for 4 days with non-decomplemented normal rabbit serum at the same concentration and increasing concentrations of anti-LMP1 mouse immune serum (dilutions to 1/600th, 1/300th and 1/200th) prepared as described in examples 1.3 and 2.


The cell proliferation is analyzed by direct observation of the cultures (number of cells and cell morphology) under an optical microscope.


For the cell cycle analysis, 1 ml of cells are removed at D4, rinsed in PBS, fixed in PBS buffer containing 4% formaldehyde for 30 min at 4° C., washed twice in cold PBS buffer, and then centrifuged. The cell ??? obtained is resuspensed in 1 ml of PBS buffer containing 200 μg of propidium iodide and 100 μg of RNase A (/ml), and then incubated for 30 min at 37° C. The reactions are kept at 4° C. overnight and the DNA content of the cells is then analyzed by fluorometry (EPICS-XL cytometer, Coulter) so as to determine the percentage of cells in G0/G1 (2n), S (>2n and <4n) and G2/M (4n) phase, and undergoing apoptosis (<2n).


9) Immunoprecipitation


106 HEK-293 cells are transfected with the plasmid pSV-HA-LMP1 or with the control plasmid pSV5, using polyethyleneimine, under the conditions recommended by the supplier. 48 hours after transfection, the cells are rinsed twice with PBS buffer, and lysed for 15 min on ice, in 500 μl of PY buffer (20 mM Tris HCl, pH 7.4, 50 mM NaCl, 5 mM EDTA and 1% Triton X-100) supplemented with protease inhibitors (1 mM leupeptin, 1 mM sodium orthovanadate and 5 IU/μl of aprotinin), and the lysate is then, finally, clarified by centrifugation at 14 000 rpm. The lysate thus obtained is incubated for one hour at +4° C. with gentle agitation, with a murin monoclonal antibody that recognizes an intracellular region of LMP1 (CS1-4, Novocastra) or with 5 μl of anti-LMP1 mouse immune serum prepared as described in examples 1.3 and 2. 100 μl of a solution of protein A-sepharose (Amersham-Pharmacia) are then added and the mixture is gently agitated on a turntable, for one hour at +4° C. The sepharose beads are then washed four times with PY buffer, eluted with 30 μl of Laemmli buffer and then subjected to polyacrylamide gel electrophoresis in the presence of SDS (SDS-PAGE).


After the electrophoretic separation, the proteins present in the gel are then transferred onto membranes (Immobilon-P, Millipore) by electro-blotting. The membranes are saturated for 1 and a half hours with a solution of casein (0.2%) in PBS buffer-0.1% Tween 20, and are then incubated for one hour with the CS1-4 murin antibody. After successive washes, the membranes are incubated for 15 minutes with peroxydase-conjugated anti-mouse IgG immunoglobulins (Jackson Immunoresearch) and the LMP1 protein immunoprecipitated is visualized using the ECL kit (Amersham).


EXAMPLE 2
Preparation of Conformational Antibodies Directed Against the Extracellular Domains of the EBV LMP1 Protein

Antibodies directed against the extracellular domains of the EBV LMP1 protein were prepared by immunization of mice with the peptides SEQ ID Nos 10 and 11 coupled to KLH, or else with the peptide SEQ ID No. 13 coupled to cholesterol, as described in example 1. The kinetics of appearance of the serum antibodies directed against the extracellular domains of the LMP1 protein were analyzed by ELISA, as described in example 1.


The results illustrated in FIG. 5 and in table II show that the antigens according to the invention are immunogenic, i.e. they induce the production of antibodies directed against the extracellular domains of the LMP1 protein when they are administered in vivo to an individual.









TABLE II







Immunogenic potency of the antigens














Immuno-





Identifier
genic


Peptide
Sequence
Number
Potency





LMP1






Domain

MSDWTGGALLWNLHGQAL

SEQ ID No:
+++


1 + 2

10





Domain

LWNLHGQALLYLQQNWWT

SEQ ID No:
+++


2 + 3

11





Domain

MSDWTGGALLYLQQNWWT

SEQ ID No:



1 + 3

12





Domain


MSDWTGGALLWNLHGQA

SEQ ID No:
+(IgM)


1 + 2 + 3

L

YLQQNWWT

13





Domain
MSDWTGGAL LWNLHGQAL
SEQ ID No:
+(IgM)


1 + 2 + 3

LYLQQNWWT

14









EXAMPLE 3
Analysis of the Specificity and of the Affinity of the Anti-LMP1 Antibodies

The specificity and the affinity of the antibodies produced as described in examples 1 and 2 are measured using the competition assay, as described in example 1.


The results obtained with the antibodies directed against the antigen representing the concatenation of the extracellular domains ED1 and ED2, separated by a cysteine residue (antigen (ED1+ED2), SEQ ID NO. 10), are illustrated respectively in FIGS. 6 and 7.


The absence of competition with the peptide (ED1+ED3) demonstrates:


firstly, that the antibodies recognize the antigen (ED1+ED2) specifically (FIG. 6), and


secondly, since these antibodies, that are polyclonal in nature (immune serum), show no reactivity with the peptide ED1+ED3, which has the ED1 sequence in common with the antigen (ED1+ED2), these results also indicate that the antibodies are conformational antibodies, given that they specifically recognize a noncontiguous epitope corresponding to the extracellular domain 1 combined with the extracellular domain 2, which domains are far apart in the primary sequence of the proteins since they are separated by a transmembrane domain and an intracellular domain, but are close when the LMP1 protein is folded in its native form.


The affinity constants determined by linear regression from the curve of FIG. 6, show that immunization with the antigen (ED1+ED2) makes it possible to produce antibodies that have a high affinity for the antigen (Ka of 7.3 nM and 20.8 nM).


EXAMPLE 4
Analysis of the Reactivity of the Antibodies with Respect to the Native or Denatured LMP1 Protein

The reactivity of the mouse immune sera prepared as described in examples 1.3 and 2, with respect to the native or denatured LMP1 antigen, is tested by immunocytochemistry, as described in example 1.7. Alternatively, the reactivity of the sera is tested by Western blotting (denaturing conditions), according to standard protocols known in themselves or by immunoprecipitation (native conditions), as described in example 1.9.


The results illustrated in FIGS. 8, 9 and 10 demonstrate that the mouse immune sera contain conformational antibodies that sensitively and specifically recognize the native LMP1 protein expressed at the surface of cells from patients suffering from latent infection with EBV, by immunocytochemistry (cells fixed under nondenaturing conditions as specified in example 1.7) and by immunoprecipitation (cell lysates prepared under nondenaturing conditions); on the other hand, they do not recognize the LMP1 protein in the denatured form, by immunocytochemistry (cells fixed under denaturing conditions as described in example 1.7) and by Western blotting (cell lysates prepared under denaturing conditions).


EXAMPLE 5
Analysis of the Cytotoxicity of the Antibodies (ADCC)

The cytotoxicity of the antibodies is tested on B lymphoblastoidal lines having suffered latent infection with EBV (B-LCLs), incubated with complement, alone (control) or in the presence of anti-LMP1 mouse immune serum, as described in example 1.8.


The results show that the anti-LMP1 immune sera have ADCC-type cytotoxicity, with respect to the cells having suffered latent infection with EBV:


direct observation of the B-LCLs shows that, at 24 h, 50% of the cells incubated in the presence of complement and of the lowest dilution of immune serum were lysed; at later times, lysis of all the cells is observed;


the cell cycle analysis (FIG. 11) shows that, after 4 days, 50% of the B-LCLs incubated in the presence of complement and of the lowest dilution of immune serum are undergoing apoptosis (F); by comparison with the control cells incubated in the presence of complement alone (A, C and E), a clear decrease in cell proliferation (decrease in the proportion of cells in S and G2/M phases), and a 30% increase in the proportion of cells undergoing apoptosis, are observed with these same B-LCLs incubated in the presence of complement and of the lowest dilution of immune serum.


EXAMPLE 6
Preparation of Conformational Antibodies Directed Against the Extracellular Domains of the EBV LMP2A Protein

Antibodies directed against the extracellular domains of the LMP2A proteins were prepared by immunization of batches of 4 BALB/c mice or of batches of 3 LOU/M rats with the peptides SEQ ID Nos 15, 16 and 17 coupled to activated KLH as described in example 1. The response in terms of antibodies directed against the extracellular domains of the LMP2A protein was analyzed by ELISA, as described in example 1.


The results given in table III show that the antigens according to the invention exhibit a high immunogenic potency (symbolized by + signs), comparable to that of the antigens derived from the extracellular loops of LMP1 (example 2). The best humoral response was developed against the peptide SEQ ID No. 16 (table III). The peptides SEQ ID Nos 18 and 19 were not synthesized.










TABLE III







Immunogenic potency of the LMP2A antigens in



mice (BALB/c) and rats (LOU/M)













SEQ
Immuno-





ID
genic


LMP2A
Sequences synthesized
No.
Potency





loop
ASSFTASVSTCTWRIEDPPFNSL
15
++



ED1 + ED2





loop
TWRIEDPPFNSLCVDAVLQLSPL
16
+++


ED2 + ED3





loop
IVDAVLQLSPLCILGTLNLTTM
17
++


ED3 + ED4





loop
ILGTLNLTTMCGGSILQTNFKSLSSTEFI
18
NT


ED4 + ED5

PNL






loop
GGSILQTNFKSLSSTEFIPNLCVMSNTLL
19
NT


ED5 + ED6

SAW






*NT: not tested






EXAMPLE 7
Analysis of the Specificity and of the Affinity of the Anti-LMP2A Antibodies

The specificity and the affinity of the anti-LMP2A antibodies produced as described in example 6 were measured using the competition assay described in example 1.


The mean affinity of the antibodies produced in BALB/c mice and LOU/M rats immunized with the peptide SEQ ID No. 16 is illustrated in FIG. 12, which is representative of the results obtained with the three peptides tested (SEQ ID Nos 15, 16 and 17). Immunization with the LMP2A antigens makes it possible, after three boosters, to produce antibodies having, in mice, an average affinity (FIG. 12, Ka=50 nM−1) less than that obtained with the peptides derived from the extracellular loops of LMP1 (FIG. 7, Ka=7.3 nM−1). Comparative analysis of the affinity, after 3 immunizations, of the antibodies against extracellular loops ED2+ED3 of LMP2A produced in rats and mice shows that the antibodies produced in rats have a much higher affinity than those produced in mice (FIG. 12; Ka=7×10−11 M−1 in rats versus 5×10−8 M−1 in mice). Similar results are obtained with the mouse and rat antibodies produced with respect to the LMP1 peptides.


The anti-LMP2 rat immune sera will be used in the studies of in vivo serotherapy of EBV-positive human tumors induced in SCID mice.


EXAMPLE 8
Analysis of the Reactivity of the Anti-LMP2A Antibodies with Respect to the Native Protein

1) Materials and Methods


a) Construction and Production of an Expression Vector for LMP2A (pREP4-LMP2)


The LMP2A cDNA was amplified by RT-PCR from mRNA extracted from EBV-positive lymphoblastic cells (LCLs). The pair of primers used for the PCR (SEQ ID No. 27: 5‘AGAATTCATGGGGTCCCTAGAA3’ and SEQ ID No. 28: 5‘AGGTACCTTATAGAGTGTTGCGA3’) contain, in bold, the EcoR1 and KpnI restriction sites for insertion into the TOPO plasmid, and, underlined, the sequences complementary to the LMP2A (strain B95.8) cDNA.


Competent JM 109 bacteria (Invitrogen) were transformed, by thermal shock, with the plasmid TOPO-LMP2A, and were then amplified for one hour at 37° C. and selected overnight at 37° C. on Luria Broth Base agar medium (LB, Invitrogen) supplemented with ampicillin (Appligene) and with X-Gal (Eurogentec). Positive clones possessing the LMP2 cDNA insert (1 500 bp) were isolated by enzymatic digestion and agarose gel electrophoresis of plasmid DNA minipreparations. These positive clones were then amplified overnight at 37° C. in 30 ml of liquid LB supplemented with ampicillin, overnight at 37° C., and the plasmid TOPO-LMP2 was then extracted using the Nucleobond AX kit, according to the supplier's protocol (Machery Nagel). The plasmid DNA thus obtained was quantified by specrophotometry at 260 nm and verified by enzymatic digestion and 1.5% agarose gel electrophoresis in the presence of ethidium bromide.


The plasmid TOPO-LMP2 (20 μg) was digested with HindIII and NotI (Roche Diagnostic) and the LMP2A insert (1 500 pb) was then isolated by agarose gel electrophoresis and purified using the Nucleospin Extract kit (Machery Nagel). 45 ng of insert were added to 100 ng of pREP4 linearized by digestion with HindIII and NotI, and the mixture was then ligated with 2 IU of T4 phage ligase (Promega) overnight at 4° C. Competent bacteria were then transformed with the ligation product. Positive clones (pREP4-LMP2A) were isolated and amplified as above for the plasmid TOPO-LMP2A.


b) Stable Transfection of Cell Lines with the Expression Vector pREP4-LMP2A


The reactivity of the anti-LMP2A antibodies produced, with respect to the native LMP2A protein, was tested using a cell line stably transfected with the plasmid pREP4-LMP2A, obtained in the following way:


HEK 293 cells were seeded into 6-well plates, in 2 ml of DMEM medium supplemented with 10% FCS (DMEM-10% FCS) and then cultured until a cell culture in the exponential phase was obtained. The cells were then rinsed and incubated in 1 ml of Optimem (GIBCO), to which a mixture of plasmid pREP4 or pREP4-LMP2A (1 to 2 ug of total DNA) and of PEI (polyethyleneimine, 4 μl/ug of DNA, Euromedex) was added as transfecting agent. After incubation for 5 hours, the transfection medium was replaced with 2 ml of DMEM-10% FCS medium. Cells stably expressing LMP2A were selected by culturing in the presence of 100 μg/ml of hygromycin for 4 to 5 weeks.


The expression vector used (pREP4) can persist stably in episomal form in the transfected cells, by virtue of its Ori P origin of replication. It replicates synchronously with division and is therefore, theoretically, entirely transmitted to all the daughter cells. A new cell line expressing LMP2A (HEK-LMP2A) is obtained, which can be compared with the HEK line of origin in immunocytochemistry assays.


c) Anti-LMP2 Immunocytochemistry on HEK and HEK-LMP2A Cells


The HEK 293 or HEK-LMP2 cells are suspended (100 000 ml) by digestion with a trypsin solution for 15 min at 37° C., and then washing in PBS buffer. The cells are deposited onto a histological slide, completely dried, and then rehydrated and fixed under nondenaturing conditions: incubation in PBS buffer containing 4% paraformaldehyde, for 20 min at ambient temperature. After washing with PBS, the cells are treated with 3% aqueous hydrogen peroxide for 10 min and saturated with blocking buffer (PBS-5% powdered skimmed milk). The cells are then incubated with the anti-LMP2 rat immune serum prepared as described in example 6 ( 1/500) saturated with normal goat serum ( 1/50). The rat IgGs are detected using the Extra5 detection-amplification kit (Sigma) and the presence of exogenous peroxydase is visualized by means of diaminobenzidine for 5 to 10 min, depending on the intensity of the coloration.


2) Results



FIG. 13 shows that the rat anti-LMP2 antibodies specifically recognize the LMP2A protein expressed at the membrane of the cells transfected with the expression vector pREP4-LMP2A; in these cells, very extensive labeling (brown coloration) is observed with the rat anti-LMP2 antibody, whereas the cells of the line of origin, which differ only by the absence of expression of LMP2A, are not labeled with the anti-LMP2 antibodies. The detection of the LMP2A protein with the rat anti-LMP2A antibodies is carried out without prior permeabilization of the cells, demonstrating that the antibodies are capable of binding specifically to the LMP2A protein expressed at the membrane of the transfected cells.


EXAMPLE 9
Antitumor Serotherapy and Immunization Using the Anti-LMP1 and Anti-LMP2 Antibodies and Antigens

The antitumor serotherapy experiments using the anti-LMP2A antibodies were carried out in a human tumor model in SCID (Severe Combined Immunodeficiency) mice. The antitumor immunization experiments were carried out in BALB/c mice, with peptide antigens and transfected murin tumor cells.


1) Serotherapy


a) Induction of Tumors Expressing LMP1 and LMP2A in SCID Mice


EBV+ human cell lines of monocyte origin (E1) and T lymphocyte origin (NC5), that develop a latency II EBV phenotype (Masy E, et al., J. Virol., 2002, 76: 6460-72; FIG. 1), are tumorigenic in SCID mice. The E1 and NC5 cells are cultured in DMEM-10% FCS medium and maintained in the exponential growth phase by adding fresh medium. The cells in suspension are washed twice in PBS by centrifugation and diluted to 10 or 30 million/ml in 0.9% NaCl medium, and then injected subcutaneously into the interscapular region in SCID mice (0.1 ml per mouse). The mice are sacrificed when the interscapular tumor exceeds 250 mm2. The survival results for the mice injected with the two amounts of cells (1 million or 3 million) of each of the lines are given in table IV.









TABLE IV







Influence of the number and of the type of


cells injected on the survival of SCID mice










Number of cells
E1 cells
NC5 cells
% survival





1 million
+

42 (n = 12)


3 million
+

25 (n = 9)


1 million

+
33 (n = 9)


3 million

+
16 (n = 6)









The cells (E1 or NC5) gave palpable tumors from the beginning of the second week following injection in most of the mice, which had to be sacrificed before the end of the third week of the experiment.


Of the two cell types tested, the NC5 cells are the most aggressive (table IV). Some SCID mice did not exhibit any tumors more than 45 days after the injection, which justifies a certain survival percentage in table IV.


b) Verification of the Expression of LMP1 and LMP2A at the Surface of the E1 and NC5 Cells


The presence of LMP1 and LMP2A at the surface of the E1 and NC5 cells was controlled by immunocytochemistry, using anti-LMP2A rat immune serum, anti-LMP1 mouse immune serum and normal serum (NRas), according to the protocols described in examples 1.7 and 8.


The intensity of the LMP1 labeling is much greater than that for LMP2A on the two cell types (FIG. 14), in agreement with a high expression level for LMP1 and LMP2A. The LMP2A labeling on the NC5 cells is even very slight, compared with that of LMP2A on the E1 cells, but clearly greater than the background noise (NRaS column, FIG. 14).


c) Anti-LMP2 Antitumor Serotherapy


The studies of serotherapy for tumors induced in SCID mice were carried out on E1 cells with the rat anti-LMP2A antibodies having an affinity of 7×10−11 M−1, described in examples 6 and 7 and in FIG. 12, directed against the peptide (SEQ ID No. 16) that mimics the ED2+ED3 domains of LMP2.


Four groups of 10 SCID mice were given an interscapular subcutaneous injection of 3 million E1 cells in a volume of 100 μl of 0.9% NaCl, on the same day, from the same preparation of E1 cells. On D+2 and D+5 after injection, the three groups of 10 mice were given two intraperitoneal (i.p.) injections of 40 μl of rat anti-LMP2 antibodies diluted in 100 μl of 0.9% NaCl, while the control group was given 100 μl of normal rat serum.


The survival curve for the SCID mice injected with 3 million E1 cells, and then treated with anti-LMP2A serum or a normal serum, is given in FIG. 15. Only 22% of the control mice survive with an injection of normal rat serum (NRaS), in agreement with the data in table IV showing 25% survival for the SCID mice injected with 3×106 E1 cells and having undergone no particular treatment. On the other hand, the SCID mice injected with 3 million E1 cells and treated with two injections of 40 μl of anti-LMP2 antibodies exhibit delayed tumor progression, and 50% of them are protected for at least 45 days, with respect to the appearance of tumors (FIG. 15).


These results demonstrate that the anti-LMP2 extracellular loop antibodies are capable of preventing the appearance and the development of human tumors induced by E1 cells in SCID mice.


2) Preventive Anticancer Immunization


These experiments comprise: (i) immunization of BALB/c mice (immunocompetent) with the LMP1 antigen so as to obtain conformational antibodies against LMP1 extracellular loops, and (ii) inoculation of the tumorigenic cells of murin origin.


a) Production of a Tumorigenic Line Expressing LMP1


Firstly, a tumorigenic murin line stably expressing LMP1 was constructed in a manner similar to the line expressing LMP2A described in example 8.


Construction of the Plasmid pREP4-LMP1


The LMP1 cDNA was isolated by digestion of the plasmid pSVHA-LMP1 using the HindIII and NotI restriction enzymes, and then cloned into the same sites in the plasmid pREP4, as described in example 8.


Production of a Stable Line Expressing LMP1


The Sp2o cell line, which has a BALB/c genetic background, makes it possible to obtain tumors in BALB/c mice. A stable line expressing LMP1 was selected from semi-adherent Sp2o cells transfected with the recombinant vector pREP4-LMP1, and then the expression of LMP1 in the transfected line was analyzed, as described in example 8. After four weeks of growth in the selected medium, all the cells are evenly labeled with the antibody against LMP1 extracellular loops (FIGS. 16a and 16b). No labeling of the Sp2o-LMP1 line is obtained with the antibodies directed against the LMP2 extracellular loops (FIGS. 16c and 16d) or alternatively with normal serum.


b) Preventive Immunization


Forty one BALB/c mice (7 weeks old) are immunized according to a standard protocol described above in example 1. The mice are given an injection, either of KLH (n=21), or of the peptide that mimics the LMP1 extracellular loops (SEQ ID NO. 10) coupled to KLH (n=20). Five days before the injection of Sp2o-pREP-4-LMP1 cells, the mice of each batch are given a booster injection, respectively with KLH or KLH coupled to the peptide SEQ ID No. 10.


The mice of the control group (KLH: n=21) are given an interscapular subcutaneous injection of 1 million Sp2o-pREP4-LMP1 cells. The mice immunized against the peptide that mimics the LMP1 extracellular loops are separated into two batches of 10 mice, and each is given, on the same day and from the same preparation of Sp2o-pREP4-LMP1 cells, an interscapular subcutaneous injection of 1 or 3 million cells in a volume of 100 μl of 0.9% NaCl.



FIG. 17 shows that the Sp2o cells transfected with pREP4-LMP1 are particularly aggressive and produce very rapidly growing tumors. The tumors develop in most of the control mice (KLH) from the first week (D+5) following injection. By 15 days, all the mice had to be sacrificed since the tumors exceeded a threshold surface area of 250 mm2.


On the other hand, none of the mice given 1 million Sp2o-pREP4-LMP1 cells (KLH-LMP1 (1 M), FIG. 17) developed a tumor more than 45 days following the inoculation. When the amount of cells injected is taken to 3 millions per mouse (KLH-LMP1 (3 M), FIG. 17), palpable tumors emerge after 23 days in certain mice. The considerable standard deviations for this curve take into account the large individual variation in the size of the tumors encountered in this treated group (KLH-LMP1 (3 M), FIG. 17). However, the progression of the tumors is slow in this group and two of the 10 treated mice remained free of any tumor.


In conclusion, all these results show that it is possible to obtain a very good humoral response against type III membrane proteins of parasitic, viral or bacterial origins as defined in FIG. 2, and to treat and immunize patients against infection with these microorganisms, by mimicking, with peptide constructs, the structure of the extracellular loops of these membrane proteins that are naturally relatively nonimmunogenic.


As emerges from the above, the invention is in no way limited to its methods of implementation, execution and application which have just been described more explicitly; on the contrary, it encompasses all the variants thereof which may occur to those skilled in the art, without departing from the context or the scope of the present invention.

Claims
  • 1. A chimeric antigen derived from an intracellular pathogenic microorganism, comprising at least one peptide fragment consisting essentially of the concatenation of the sequences of at least two adjacent extracellular domains in the native structure of a type III membrane protein of said intracellular pathogenic microorganism, and wherein the antigen induces the production, in individuals immunized with said antigen, of conformational antibodies that recognize said type type III membrane protein in the native form.
  • 2. The antigen as claimed in claim 1, wherein said type III membrane protein has 2n transmembrane domains.
  • 3. The antigen as claimed in claim 1, said peptide fragment comprises at least one heterologous linking sequence of 1 to 5 amino acids that are identical to or different from one another, preceding the sequence of one of said extracellular domains.
  • 4. The antigen as claimed in claim 3, wherein said amino acids are different from those present in the sequences of said extracellular domains.
  • 5. The antigen as claimed in claim 3, wherein all the sequences of the adjacent extracellular domains, with the exception of those located at the N and/or C-terminal ends of said peptide fragment, are preceded by a heterologous linking sequence.
  • 6. The antigen as claimed in claim 3, wherein all the sequences of the adjacent extracellular domains of said peptide fragment are preceded by a heterologous linking sequence.
  • 7. The antigen as claimed in claim 3, wherein said amino acids are chosen from cysteine (C) and/or lysine (K).
  • 8. The antigen as claimed in claim 1, wherein said peptide fragment also includes, between the heterologous linking sequences and the sequences of the extracellular domains and on either side of said sequences of the extracellular domains, a sequence of at least one amino acid, preferably of 1 to 7 amino acids, preferably 2 amino acids, corresponding to that of the transmembrane domain flanking said extracellular domain in the structure of said type III membrane protein.
  • 9. The antigen as claimed in claim 1, derived from a type III membrane protein selected from the group consisting of: the EBV LMP1 and LMP2A proteins (Swissprot accession number, respectively P03230 and P13285, with reference to the sequence of the EBV strain of B95.8), the KSHV LAMP K15-P and LAMP K15-M proteins (Genbank accession numbers, respectively AAD45297 and AAD45296), the HCV p7, NS2 and NS4B proteins (EMBL accession number AF009606), the Chlamydia trachomatis MOMP protein (NCBI accession number AF352789) and the Mycobacterium tuberculosis Mmpl 1 to 12 proteins (EBML accession number Z87425.1).
  • 10. The antigen as claimed in claim 1, wherein said peptide fragment consists essentially of the concatenation of the sequences of 2 to 6 adjacent extracellular domains, preferably 2 or 3 adjacent extracellular domains, in the native structure of said protein.
  • 11. The antigen as claimed in claim 1, wherein it is selected from the sequences SEQ ID Nos 10, 11 and 13 to 23.
  • 12. The antigen as claimed in claim 1, wherein it comprises at least two peptide fragments as defined in claim 1, derived from different type III membrane proteins.
  • 13. The antigen as claimed in claim 3, wherein at least one of the amino acids of said heterologous linking sequence is covalently attached to at least one carrier protein or at least one lipid.
  • 14. The antigen as claimed in claim 13, wherein at least two amino acids, each derived from the unique linking sequence of different peptide fragments, are attached to a carrier protein.
  • 15. The antigen as claimed in claim 13, wherein a cysteine or a lysine of a heterologous linking sequence is attached to a carrier protein, respectively via a thioether bond and an amide bond.
  • 16. The antigen as claimed in claim 13, wherein said carrier protein is KLH.
  • 17. The antigen as claimed in claim 13, wherein in that the lipid(s) is (are) branched via ether, thioether, ester and thioester bonds, preferably via thioester bonds.
  • 18. The antigen as claimed in claim 16, wherein at least two amino acids derived from one or more heterologous linking sequence(s) of a single peptide fragment are each attached to a lipid.
  • 19. The antigen as claimed in claim 13, wherein said lipid is selected from cholesterol and palmitic acid.
  • 20. The antigen as claimed in claim 19, comprising at least one cholesterol attached to a cysteine, aspartic acid or glutamic acid residue, or else palmitic acid attached to a serum or a threonine.
  • 21. The antigen as claimed in claim 17, wherein it is in the form of lipopeptide vesicles or micelles.
  • 22. An immunogenic composition, comprising an antigen as claimed in claim 1, combined with at least one pharmaceutically acceptable vehicle.
  • 23. The use of an antigen as claimed in claim 1, for producing a vaccine intended for the prevention or treatment of a latent or chronic infection with an intracellular pathogenic microorganism or of associated pathologies.
  • 24. An antibody directed against a type III membrane protein as defined in claim 1, wherein it is produced by immunization of an appropriate animal with said antigen.
  • 25. The antibody as claimed in claim 24, wherein it is selected from monoclonal antibodies and humanized antibodies.
  • 26. A reagent for diagnosing a latent or chronic infection with an intracellular pathogenic microorganism, and associated pathologies, wherein it comprises at least one antibody as claimed in claim 24.
  • 27. The use of an antibody as claimed in claim 24, for preparing a diagnostic reagent intended for detecting a latent or chronic infection with an intracellular pathogenic microorganism, and the associated pathologies.
  • 28. A kit for diagnosing a latent or chronic infection with an intracellular pathogenic microorganism, and the associated pathologies, comprising at least one antibody as claimed in claim 24.
  • 29. A pharmaceutical composition, comprising at least one antibody as claimed in claim 24, combined with at least one pharmaceutically acceptable vehicle.
  • 30. The use of an antibody as claimed in claim 24, for preparing a medicinal product intended for the treatment of a latent or chronic infection with an intracellular pathogenic microorganism and of the associated pathologies.
  • 31. An isolated nucleic acid molecule, comprising a sequence encoding an antigen as claimed.
  • 32. A probe and/or a primer for obtaining a sequence coding for an antigen as claimed in claim 1, comprising a sequence of approximately 10 to 30 nucleotides corresponding to that located at the junction of the sequences encoding a transmembrane domain and of the sequences encoding an extracellular domain adjacent to the above domain, of a type III membrane protein as defined in claim 1.
  • 33. A eukaryotic or prokaryotic cell recombinant vector, comprising an insert consisting of a nucleic acid molecule as claimed in claim 31.
  • 34. A eukaryotic or prokaryotic cell modified with a recombinant vector as claimed in claim 33.
Priority Claims (1)
Number Date Country Kind
03/00943 Jan 2003 FR national
PCT Information
Filing Document Filing Date Country Kind 371c Date
PCT/FR04/00190 1/28/2004 WO 00 8/9/2006