Patent Application
20240360180
The present application claims priority to Chinese Patent Application No. 202210100598.6 filed with the China National Intellectual Property Administration (CNIPA) on Jan. 27, 2022, and entitled “ATTENUATION METHOD OF INFLUENZA VIRUS, ATTENUATED INFLUENZA VIRUS STRAIN, AND USE THEREOF”, which is incorporated herein by reference in its entirety.
The present disclosure relates to the technical field of biomedicine and specifically relates to an attenuation method of an influenza virus, an attenuated influenza virus strain, and the use thereof.
Influenza A (IA) is a highly contagious acute respiratory disease caused by an influenza A virus (IAV), which is a segmented negative-stranded RNA virus of the orthomyxoviridae family. Vaccination is the main means for preventing IAV infection, and inactivated and live-attenuated vaccines are currently available. Due to limited mucosal immune responses and cytotoxic T-cell responses, a protective effect of an inactivated vaccine lasts only for a short period of time, and thus the inactivated vaccine needs to be given once a year. In contrast, an IAV live-attenuated vaccine can cause strong mucosal and cellular immune responses through nasal immunization, and thus a protective effect of the IAV live-attenuated vaccine can last for a long period of time. There are only two live-attenuated vaccines currently on the market that are based on a cold-adapted virus strain, and these two vaccines can only be used for people between the ages of 2 and 49. Therefore, it is necessary to develop a safe and effective live-attenuated vaccine to fight against IAV infection.
An objective of the present disclosure is to provide an attenuation method of an influenza virus, an attenuated influenza virus strain, and the use thereof. An attenuated influenza virus strain (a replication-restricted virus) prepared by the attenuation method of the present disclosure can exhibit prominent growth characteristics on an M2 protein-expressing MDCK cell line, and is non-pathogenic to mice compared with a parental virus, which can lay a foundation for the screening of safe and effective IAV live-attenuated vaccines. The attenuated influenza virus strain can also grow well on an MDCK cell or a chicken embryo, and the replication-restricted virus at a high dose can grow well on the MDCK cell or the chicken embryo, which makes it possible to produce an attenuated virus with a chicken embryo in large quantities.
The present disclosure provides an attenuation method of an influenza virus, including the following step: deleting a random number of bases at a random position for a transmembrane domain and a cytoplasmic domain of an M2 protein in a conserved region of the influenza virus to obtain an attenuated influenza virus with a corresponding base deletion.
Preferably, a parental virus targeted by the attenuation method includes A/Puerto Rico/8/1934.
Preferably, the deleting a random number of bases at a random position refers to one selected from the group consisting of (a) to (f):
The present disclosure also provides an attenuated influenza virus strain prepared by the attenuation method described in the technical solution, and the attenuated influenza virus strain is prepared as follows: with A/Puerto Rico/8/1934 as a parental virus, subjecting the M2 protein to one base deletion selected from the group consisting of (a) to (f):
Preferably, a coding region for an M2 protein of the attenuated influenza virus strain has a nucleotide sequence shown in SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, SEQ ID NO: 5, or SEQ ID NO: 6.
The present disclosure also provides a group of plasmids for constructing an attenuated influenza virus strain, and the plasmids include nucleotide sequences shown in SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, SEQ ID NO: 5, and SEQ ID NO: 6, respectively.
Preferably, a basal plasmid for constructing the plasmids includes a nucleotide sequence shown in SEQ ID NO: 7.
The present disclosure also provides primers for constructing the plasmids described in the technical solution, and the primers have nucleotide sequences shown in SEQ ID NOS: 8-19.
The present disclosure also provides a use of the attenuation method described in the technical solution, the attenuated influenza virus strain described in the technical solution, the plasmids described in the technical solution, or the primers described in the technical solution in preparation of a live-attenuated influenza vaccine.
The present disclosure provides an attenuation method of an influenza virus. An attenuated influenza virus strain (a replication-restricted virus) prepared by the attenuation method of the present disclosure can exhibit prominent growth characteristics on an M2 protein-expressing MDCK cell line, and is non-pathogenic to mice compared with a parental virus, which can lay a foundation for the screening of safe and effective IAV live-attenuated vaccines. The attenuated influenza virus strain can also grow well on an MDCK cell or a chicken embryo, and the replication-restricted virus at a high dose can grow well on the MDCK cell or the chicken embryo, which makes it possible to produce an attenuated virus with a chicken embryo in large quantities.
The present disclosure provides an attenuation method of an influenza virus, including the following step: deleting a random number of bases at a random position for a transmembrane domain and a cytoplasmic domain of an M2 protein in a conserved region of the influenza virus to obtain an attenuated influenza virus with a corresponding base deletion.
In the present disclosure, a reverse genetic system is preferentially used to generate a series of random base deletions for a transmembrane domain (TM) and a cytoplasmic domain (CT), and the toxicity of a virus with a random deletion is evaluated, which can facilitate the acquisition of a safe and effective IAV live-attenuated vaccine.
In the present disclosure, a parental virus targeted by the attenuation method preferably includes A/Puerto Rico/8/1934 (abbreviated IAV PR8).
In the present disclosure, the deleting a random number of bases at a random position preferably refers to one selected from the group consisting of (a) to (f):
An attenuated influenza virus strain prepared by the attenuation method of the present disclosure can grow well on an MDCK cell or a chicken embryo. Babl/C mice are subjected to intranasal immunization with the attenuated influenza virus strain, and then the body weight changes and survival are observed and the viral loads in turbinates and lungs are detected. Results show that the attenuated influenza virus strain is non-pathogenic to mice compared with the parental virus IAV PR8. The attenuation method of the present disclosure lays a foundation for the screening of safe and effective IAV live-attenuated vaccines.
The present disclosure also provides an attenuated influenza virus strain prepared by the attenuation method described in the technical solution, and the attenuated influenza virus strain is prepared as follows: with A/Puerto Rico/8/1934 as a parental virus, subjecting the M2 protein to one base deletion selected from the group consisting of (a) to (f):
In the present disclosure, a coding region for an M2 protein of the attenuated influenza virus strain has a nucleotide sequence shown in SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, SEQ ID NO: 5, or SEQ ID NO: 6.
The present disclosure also provides a group of plasmids for constructing an attenuated influenza virus strain, and the plasmids include nucleotide sequences shown in SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, SEQ ID NO: 5, and SEQ ID NO: 6, respectively. The plasmids of the present disclosure are random base deletion plasmids for the M2 gene. The present disclosure has no special limitations on a construction method of the deletion plasmids, and a conventional construction method of the deletion plasmids well known to those skilled in the art may be adopted. In the present disclosure, a basal plasmid for constructing the plasmids preferably includes a nucleotide sequence shown in SEQ ID NO: 7. The present disclosure has no special limitations on a type of the basal plasmid, as long as the basal plasmid includes a nucleotide sequence shown in SEQ ID NO: 7.
The present disclosure also provides primers for constructing the plasmids described in the technical solution, and the primers have nucleotide sequences shown in SEQ ID NOS: 8-19.
The present disclosure also provides a use of the attenuation method described in the technical solution, the attenuated influenza virus strain described in the technical solution, the plasmids described in the technical solution, or the primers described in the technical solution in preparation of a live-attenuated influenza vaccine.
The attenuation method of an influenza virus, the attenuated influenza virus strain, and the use thereof according to the present disclosure will be further described in detail below with reference to specific examples. The technical solutions of the present disclosure include, but are not limited to, the following examples.
Plasmids expressing the M2 gene of the influenza virus strain PR8 were extracted (the present disclosure has no special limitations on the construction method of the plasmid, and an M2-overexpressing plasmid can be constructed by a conventional recombinant plasmid construction method with a common plasmid well known by those skilled in the art and the M gene), and PCR amplification was conducted with a series of base deletion primers (primer sequences were shown in Table 1). After a molecular weight was identified by agarose gel electrophoresis to be correct, a target gel band was recovered and subjected to recombination at 50° C. for 15 min, a recombination product was transformed into an Escherichia coli (E. coli) competent cell, and colonies were picked for sequencing; and after a correct sequence was determined, the following deletion plasmids were successfully prepared with endotoxin-free small and medium kits: PR8-M2-del14, PR8-M2-del20, PR8-M2-del22, PR8-M2-del38, PR8-M2-del65, and PR8-M2-del103 (agarose gel electrophoresis results of the extracted plasmids PR8-M2-del14, PR8-M2-del20, PR8-M2-del22, PR8-M2-del38, PR8-M2-del65, and PR8-M2-del103 were shown in
An HEK293T cell was inoculated into a special six-well plate of Thermo Fisher, and 12 h later, the plasmids including 7 genes of PR8 (pFlu-PR8-PB2, pFlu-PR8-PB1, pFlu-PR8-PA, pFlu-PR8-NP, pFlu-PR8-NS, pFlu-PR8-HA, and pFlu-PR8-NA), each of the series of random base deletion plasmids for the M2 gene constructed in Example 1, and the M2 protein-expressing plasmid were co-transfected into the HEK293T cell; 6 h to 8 h after the transfection, a medium was changed; 48 h after the transfection, the cell plate was frozen and thawed once, and a culture supernatant was collected and inoculated in a T25 culture flask with the M2 protein-expressing MDCK cell; and 72 h to 96 h after the inoculation, the CPE was observed, the culture flask was frozen and thawed once and then centrifuged, and a resulting supernatant was collected. Resulting replication-restricted influenza viruses were named rPR8-M2-del14, rPR8-M2-del20, rPR8-M2-del22, rPR8-M2-del38, rPR8-M2-del65, and rPR8-M2-del103, respectively.
A viral RNA obtained above was extracted using a viral RNA extraction kit, and RT-PCR amplification was conducted with the primers in Table 2; and after a molecular weight was identified by agarose gel electrophoresis to be correct (
The M2 protein-expressing MDCK cell was inoculated into a 96-well plate; after the cell grew to form a monolayer, 50 μL of a replication-restricted influenza virus was added to 450 μL of 1% TPCK opi-MEM, and a resulting mixture was thoroughly shaken to obtain a system 1 with a final concentration of 10−1; 50 μL of the system 1 was taken and added to 450 μL of 1% TPCK opi-MEM, and a resulting mixture was thoroughly shaken to obtain a system 2 with a final concentration of 10−2; in this way, the virus solution was continuously diluted 10-fold to 10−10; then a medium in the 96-well plate was removed, the plate was washed with PBS, and 100 μL of a virus solution with a corresponding dilution ratio was added to each well, where 3 replicates were set for each dilution ratio; the cell was cultivated for 72 h in a cell culture incubator at 37° C. and 5% CO2, and then a CPE was observed; and TCID50 was calculated by the Reed-Muench method, and a viral titer was shown in Table 3.
The M2 protein-expressing MDCK cell was inoculated into a 48-well plate; after the cell grew to form a monolayer, the replication-restricted influenza viruses rPR8-M2-del14, rPR8-M2-del20, rPR8-M2-del22, rPR8-M2-del38, rPR8-M2-del65, and rPR8-M2-del103 and the parental virus IAV PR8 were used to infect the cell at an MOI of 0.001, where 3 replicates were set for each group; the cell was cultivated in a 37° C. and 5% CO2 incubator; a virus was collected at 24 h, 48 h, 72 h, and 96 h after the infection, virus solutions collected at different time points each were continuously diluted 10-fold, where 3 replicates were set for each dilution ratio; a resulting dilution was added to an M2 protein-expressing MDCK cell growing to form a monolayer in a 96-well plate, and the cell was cultivated in a cell culture incubator at 37° C. and 5% CO2 for 72 h; a CPE was observed, and TCID50 was calculated by the Reed-Muench method; and data analysis was conducted, and then a growth curve of a replication-restricted influenza virus was plotted (
An MDCK cell was inoculated into a 48-well plate; after the cell grew to form a monolayer, the replication-restricted influenza viruses rPR8-M2-del14, rPR8-M2-del20, rPR8-M2-del22, rPR8-M2-del38, rPR8-M2-del65, and rPR8-M2-del103 and the parental virus IAV PR8 each were used to infect the cell at MOIs of 0.001, 0.004, 0.016, 0.064, 0.256, 1.024, 4.096, and 16.384, and the cell was cultivated in a 37° C. and 5% CO2 incubator for 72 h; a CPE was observed, and the cell was photographed (
Stock solutions of the replication-restricted influenza viruses rPR8-M2-del14, rPR8-M2-del20, rPR8-M2-del22, rPR8-M2-del38, rPR8-M2-del65, and rPR8-M2-del103 each were inoculated into 4 chicken embryos; and 72 h later, an allantoic fluid of a chicken embryo was collected and subjected to a CRBC agglutination test, and an agglutination titer was recorded (Table 4). The rPR8-M2-del20 virus with the optimal attenuation effect can replicate in the chicken embryos and achieve a high CRBC agglutination titer, indicating that the replication-restricted influenza virus of the present disclosure can be produced in large quantities with a chicken embryo, which reduces the cost and increases the yield.
4-5 week-old Balb/C female mice were divided into 7 groups, with 8 mice in each group. The mice each were subjected to intranasal immunization with the replication-restricted viruses rPR8-M2-del14, rPR8-M2-del20, rPR8-M2-del22, rPR8-M2-del38, rPR8-M2-del65, and rPR8-M2-del103 and the parental virus IAV PR8 at TCID50 of 106, and 3 d after the immunization, 3 mice were selected from each group and sacrificed, and turbinates and lungs were collected and ground; and a ground tissue was taken and tested for a viral load by the same determination method as in Example 3, and TCID50 was calculated by the Reed-Muench method. Viral titers were shown in Table 5. A body weight of each of the remaining 5 mice in each group was measured and recorded daily for 14 d, and a body weight change curve of mice was plotted (
The above are merely preferred implementations of the present disclosure. It should be noted that several improvements and modifications may further be made by a person of ordinary skill in the art without departing from the principle of the present disclosure, and such improvements and modifications should also be deemed as falling within the protection scope of the present disclosure.
| Number | Date | Country | Kind |
|---|---|---|---|
| 202210100598.6 | Jan 2022 | CN | national |
| Filing Document | Filing Date | Country | Kind |
|---|---|---|---|
| PCT/CN2022/090199 | 4/29/2022 | WO |
