Automated sectioning, imaging, and extraction of renal glomeruli for single-cell analysis

Information

  • Research Project
  • 9680322
  • ApplicationId
    9680322
  • Core Project Number
    R43DK120281
  • Full Project Number
    1R43DK120281-01
  • Serial Number
    120281
  • FOA Number
    PA-17-147
  • Sub Project Id
  • Project Start Date
    9/15/2018 - 5 years ago
  • Project End Date
    8/31/2019 - 4 years ago
  • Program Officer Name
    GOSSETT, DANIEL ROBERT
  • Budget Start Date
    9/15/2018 - 5 years ago
  • Budget End Date
    8/31/2019 - 4 years ago
  • Fiscal Year
    2018
  • Support Year
    01
  • Suffix
  • Award Notice Date
    9/15/2018 - 5 years ago
Organizations

Automated sectioning, imaging, and extraction of renal glomeruli for single-cell analysis

Project Abstract Automated sectioning, imaging, and extraction of renal glomeruli for single-cell analysis Understanding heterogeneous cell states is essential for studying and treating diverse diseases of the kidney. Renal glomeruli, 100-200 ?m across, are abundant but sparse, and implicated in many causes of chronic kidney disease. The proposed method will automate the sectioning, imaging, and extraction of renal glomeruli with single-cell resolution. This approach will sample large populations of glomeruli from human tissue and register serial sections into digital 3d reconstructions. Using this technique, this project aims to ?quantify single cells in whole glomeruli?, ?identify a panel of compatible immunostaining markers, and assess the feasibility of capturing serial frozen tissue sections. ?Together, these will validate new methods to study cell distribution and protein expression in glomerular disease. More broadly, this will facilitate additional automation of sectioning, staining, imaging, and analysis for single-cell experiments. This will enable quantitative, single-cell research in renal pathology, benefiting scientific discovery as well as the development of new treatments.

IC Name
NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES
  • Activity
    R43
  • Administering IC
    DK
  • Application Type
    1
  • Direct Cost Amount
  • Indirect Cost Amount
  • Total Cost
    240750
  • Sub Project Total Cost
  • ARRA Funded
    False
  • CFDA Code
    847
  • Ed Inst. Type
  • Funding ICs
    NIDDK:240750\
  • Funding Mechanism
    SBIR-STTR RPGs
  • Study Section
    ZRG1
  • Study Section Name
    Special Emphasis Panel
  • Organization Name
    3SCAN, INC.
  • Organization Department
  • Organization DUNS
    968428446
  • Organization City
    SAN FRANCISCO
  • Organization State
    CA
  • Organization Country
    UNITED STATES
  • Organization Zip Code
    941102128
  • Organization District
    UNITED STATES