Avian recombinant live vaccine using, as vector, the avian infectious laryngotracheitis virus

The present invention relates to vaccines for avian use based on infectious laryngotracheitis virus (ILTV) into which there has been inserted, by genetic recombination, at least one heterologous nucleotide sequence in particular encoding and expressing an antigenic polypeptide from an avian pathogenic agent, under conditions ensuring immunization leading to effective protection of the vaccinated animal against the said pathogenic agent.
The infectious laryngotracheitis virus (ILTV) is an alphaherpesvirus (B. Roizman, Arch. Virol. 1992. 123. 425-449) which causes a major respiratory pathology (infectious laryngotracheitis or ILT) in chicken (L. E. Hanson and T. J. Bagust, Diseases of Poultry 9th edn 1991. pp 485-495. Ames, Iowa State University Press). The vaccines currently available against this condition contain an attenuated strain which can be administered by various routes including the intranasal, conjunctival and cloacal routes, in drinking water and by aerosol (L. E. Hanson and T. J. Bagust, Diseases of Poultry 9th Edition 1991. pp 485-495. Ames, Iowa State University Press).
Studies of the molecular biology of the ILTV virus have made it possible to characterize the viral genome (M. A. Johnson et al., Arch. Virol. 1991. 119. 181-198) and to identify some of the virus genes (A. M. Griffin, J. Gen. Virol. 1989. 70. 3085-3089) including the genes encoding thymidine kinase (UL23) (A. M. Griffin and M. E. G. Boursnell, J. Gen. Virol. 1990. 71. 841-850; C. L. Keeler et al., Avian Dis. 1991. 35. 920-929), the glycoprotein gB (UL27) (A. M. Griffin, J. Gen. Virol. 1991. 72. 393-398; K. Kongsuwan et al., Virology 1991. 184. 404-410; D. J. Poulsen et al., Virus Genes 1991. 5. 335-347), the glycoprotein gC (UL44) (D. H. Kingsley et al., Virology 1994. 203. 336-343), the capsid protein p40 (UL26) (A. M. Griffin, Nucl. Acids Res. 1990. 18. 3664), the protein homologous to the ICP4 protein of herpes simplex (HSV-1) (M. A. Johnson et a)., Virus Research 1995. 35. 193-204), the proteins homologous to the proteins ICP27 (UL54), glycoprotein gK (UL53) and DNA helicase (UL52) from :HSV-1 (M. A. Johnson et al., Arch. Virol. 1995. 140. 623-634), ribonucleotide reductase (A. M. Griffin, J. Gen. Virol. 1989. 70. 3085-3089, WO-A-90/02802) the genes present in the short unique sequence of the genome (U.sub.s) (M. A. Johnson et al., DNA Sequence--The Journal of Sequencing and Mapping 199S. Vol. 5. pp 191-194; K. Kongsuwan et al., Arch. Virol. 1995. 140. 27-39; K. Kongsuwan et al., Virus Research 1993. 29. 125-140; K. Kongsuwan et al., Virus Gene 1993. 7. 297-303; WO-A-92/03554; WO-A-95/00622).
The aim of the present invention is to develop an avian vaccine based on recombinant ILTV virus expressing a heterologous gene, this virus being capable of replicating and inducing immunity in the vaccinated host while preserving good safety.
Another aim of the invention is to provide such a vaccine which is at the same time particularly effective against infectious laryngotracheitis (ILT).
Another aim of the invention is to provide such a vaccine which can be used in mass vaccination by the mucosal route, for example by the aerosol route or in drinking water, such that the replication of the virus at the mucosal level makes it possible to induce mucosal and systemic immunity. Such a mucosal immunity will be particularly effective for combating respiratory diseases as well as other diseases for which the route of entry of the pathogenic agent is mucosal.
Another aim of the invention is to provide such a vaccine which can be used both in adults and in young animals.
A specific aim is to provide such a vaccine which can be used in mass vaccination, by the mucosal route, of any young animals such as one-day old chicks.
Another aim of the invention is to provide a vaccine against ILT which has an increased efficacy compared with the parental strain and which may even possibly allow the insertion and expression of a heterologous gene.
During their studies on the ILTV virus, the inventors found a genomic region which proved entirely appropriate as site for insertion of heterologous genes. This made it possible to develop a recombinant live vaccine based on an ILTV vector into which is inserted at least one sequence encoding an avian immunogen, in particular the HN and F proteins from the Newcastle disease virus (NOV), and/or the gB glycoprotain from Marek's disease virus (MDV), and/or the VP2 protein from the infectious bursal disease virus (IBDV), and/or the S and M proteins from the infectious bronchitis virus (IBV). Such a vaccine, incorporating a sequence encoding NDV, MDV and IBV proteins, provides satisfactory protection of the animals against Newcastle disease, against Marek's disease, against infectious bursal disease and against infectious bronchitis respectively.
The subject of the present invention is therefore an avian recombinant live vaccine comprising, as vector, the ILTV virus comprising at least one heterologous nucleotide sequence in particular encoding and expressing an antigenic polypeptide from an avian pathogenic agent, inserted into the insertion locus which, in a specific ILTV strain, is defined between nucleotides 1624 and 3606 in the sequence SEQ ID No:5.
Heterologous sequence is understood to mean a sequence which is not derived from the insertion locus, that is to say both a sequence not originating from the ILTV virus and a sequence derived from another genomic region of this virus.
Insertion into the insertion region is understood to mean in particular simple insertion or insertion after total or partial deletion of the insertion locus.
There have been determined in this insertion locus an open reading frame (ORF B) which appears between nucleotides 1713 and 2897 in SEQ ID No:5, and an intergenic region (between nucleotides 2898 and 3606) between ORF B and ORF C. It is therefore possible to insert both into ORF B or into the intergenic region, and overlapping these two regions. One or more expression cassettes may be inserted, each comprising at least one sequence to be expressed.
To express the inserted sequence, the use of a strong eukaryotic promoter such as the. CMV immediate early (IE) promoter, the Rous sarcoma virus (RSV) LTR and the SV40 virus early promoter is preferred.
CMV immediate early (IE) promoter is understood to mean the fragment given in the examples as well as its subfragments which retain the same promoter activity.
The CMV IE promoter may be the human promoter (HCMV IE) or the murine promoter (MCMV IE) or alternatively a CMV IE promoter of another origin, for example from monkeys, rats, guinea pigs or pigs.
The nucleotide sequence inserted into the ILTV vector so as to be expressed may be any sequence encoding an antigenic polypeptide, from an avian pathogenic agent, capable, once expressed under the favourable conditions offered by the invention, of providing immunization leading to effective protection of the animal vaccinated against the pathogenic agent. It will therefore be possible to insert, under the conditions of the invention, the nucleotide sequences encoding antigens of interest for a given disease.
This nucleotide sequence inserted into the ILTV vector may also encode an immunomodulatory polypeptide, especially a cytokine.
Remarkably, it will be possible for the vaccines according to the invention to be used for vaccination in ovo of one-day-old or older chicks and of adults. It will be possible to use various routes of administration; the parenteral route, or the mucosal routes such as the oronasal (drinking water, aerosol), conjunctival (eye drop) or cloacal route, with a preference for the routes allowing mass mucosal vaccination (drinking water, aerosol).
The invention proves particularly useful both for protection against respiratory pathologies and against systemic pathologies by blocking the natural routes of entry of the pathogenic agent.
The invention may in particular be used for the insertion of a nucleotide sequence appropriately encoding an antigenic protein from the NDV virus, and in particular the HN glycoprotein or the F glycoprotein. A recombinant live vaccine is thus obtained providing, in addition to protection against infectious laryngotracheitis, satisfactory protection against Newcastle disease.
The recombinant vaccine against Newcastle disease will preferably contain from 10 to 1 PFU/dose.
Other preferred cases of the invention are the insertion of nucleotide sequences encoding antigens from other avian pathogenic agents and in particular, but with no limitation being implied, antigens from Marek's disease, in particular gB, gD and gH+gL genes (WO-A-90/02803), from the infectious bursal disease virus, in particular VP2 gene, from the infectious bronchitis virus (IBV), in particular S and M genes (M. Binns et al., J. Gen. Virol. 1985, 66. 719-726; M. Boursnell et al., Virus Research 1984. 1. 303-313), from the chicken anaemia virus (CAV), in particular VP1 (52 kDa)+VP2 (24kDa) (N. H. M. Noteborn et al., J. Virol. 1991. 65.3131-3139), from the ILTV virus, in particular the genes coding for gB (A. M. Griffin, J. Gen. Virol. 1991. 72. 393-398), or for gD (M. A. Johnson et al., DNA Sequence--The Journal of Sequencing and Mapping 1995. Vol. 5. pp 191-194. Harwood Academic Publishers GmbH), or for gp60 (K. K. Kongsuwan et al., Virus Genes 1993. 7. 297-303), and from the infectious "swollen head syndrome" virus (or chicken pneumovirosis or turkey rhinotracheitis virus (TRTV); pneumovirus), in particular the fusion glycoprotein F (Q. Yu et al., J. Gen. Virol. 1991. 72. 75-81), or the attachment glycoprotein G (R. Ling et al., J. Gen. Virol. 1992. 73. 1709-1715; K. Juhasz and J. Easton, J. Gen. Virol 1994. 75. 2873-2880). The doses will be preferably the same as those for the Newcastle vaccine.
Within the framework of the present invention, it is of course possible to insert more than one heterologous sequence into the same ILTV virus, in particular into this locus. It is possible in particular to insert therein sequences derived from the same virus or from different viruses, which also comprises the insertion of sequences from ILTV and from another avian virus. It is also possible to associate therewith sequences encoding immunomodulators, and in particular cytokines.
For example, the CMV IE promoter is associated with another promoter so that their 5' ends are adjacent (which implies transcriptions in opposite directions), which makes it possible to insert, into the insertion zone, two nucleotide sequences, one under the control of the CMV IE promoter, the other under that of the associated promoter. This construct is remarkable by the fact that the presence of the CMV IE promoter, and in particular of its activating (enhancer) part, activates the transcription induced by the associated promoter. The associated promoter may be in particular a promoter of a gene from the ILTV virus or from the MDV or HVT virus.
An advantageous case of the invention is a vaccine comprising a nuclectide sequence encoding NDV HN and a nucleotide sequence encoding NDV F or an antigen for another avian disease, especially those mentioned above, one of the genes being under the control of the CMV IE promoter, and the other under the control of the associated promoter.
It is also possible to assemble two CMV IE promoters of different origins with their 5' ends adjacent.
Of course, the heterologous sequences and their associated promoters may be inserted more conventionally in tandem into the insertion locus, that is to say following the same direction of transcription.
The expression of several heterologous genes inserted into the insertion locus may also be possible by insertion of a sequence called "IRES" (Internal Ribosome Entry Site) obtained especially from a picornavirus such as the swine vesicular disease virus (SVDV; B.-F. Chen et al., J. Virology, 1993, 67, 2142-2148), the encephalomyocarditis virus (EMCV; R. J. Kaufman e al. , Nucleic Acids Research, 1991, 19, 4485-4490), the foot-and-mouth disease virus (FMDV; N. Luz and E. Beck, J. Virology, 1991, 6486-6494), or alternatively from another origin. The content of these three articles is incorporated by reference. The cassette for expression of two genes would therefore have the following minimum structure: promoter--gene 1--IRES--gene 2--polyadenylation signal. The recombinant live vaccine according to the invention may therefore comprise, inserted into the insertion locus, an expression cassette comprising in succession a promoter, two or more genes separated in pairs by an IRES, and a polyadenylation signal.
In addition to the insertion into the locus according to the invention, it is possible to carry out one or more other insertions, one or more mutations, or one or more deletions elsewhere in the genome; if the parental strain is virulent, it is possible, for example, to inactivate (by deletion, insertion or mutation) genes involved in the virulence, such as the thymidine kinase gene, the ribonucleotide reductase gene, the gE gene and the like. In any case, the insertion into a locus other than that described in the invention makes it possible to express other genes.
The subject of the present invention is also a vaccine against ILT, comprising a recombinant ILTV virus into which there has been inserted upstream of the genes encoding major ILTV immunogens, preferably the genes coding for gB (A. M. Griffin, J. Gen. Virol. 1991. 72. 393-398), or for gD (M. A. Johnson et al., DNA Sequence-The Journal of Sequencing and Mapping 1995. Vol. S. pp 191-194. Harwood Academic Publishers GmbH), or for gp60 (K. K. Kongsuwan at al., Virus Genes 1993. 7. 297-303), an exogenous promoter, in particular a strong promoter as described above. This makes it possible to increase the level of expression of one or more of these genes and thus to lead to a vaccine having increased efficacy against ILT. It is of course possible to combine this with a construction as described above comprising the insertion of a heterologous sequence into the insertion locus.
The subject of the present invention is also a multivalent vaccine formula comprising, as a mixture or to be mixed, a vaccine as defined above with another vaccine, and especially another avian recombinant live vaccine as defined above, these vaccines comprising different inserted sequences, especially from different pathogens.
The subject of the present invention is also a method for preparing the vaccines according to the invention, as evident from the description.
The subject of the present invention is also a method of avian vaccination comprising the administration of a recombinant live vaccine or of a multivalent vaccine formula as defined above. Its subject is in particular such a method for the vaccination in ovo of one-day-old or older chicks and of adults. Various routes of administration of the vaccine may be used (see above) with a preference for the routes allowing mass vaccination by the mucosal route (aerosol, drinking water), the dose of vaccine being chosen preferably between 10.sup.1 and 10.sup.4 per animal.
The subject of the present invention is also an ILTV virus comprising at least one heterologous nucleotide sequence as described above, inserted into the insertion locus as defined above.
The subject of the invention is also a DNA fragment consisting of all or part of the sequence between nucleotides 1 and 3341 of SEQ ID No:5.

The invention will now be described in greater detail by means of the non-limiting exemplary embodiments, taken with reference to the drawing, in which:
FIG. 1: Restriction map, position of the cloned fragments and position of the ORFs
FIG. 2: Sequence of 3841 bp and translation of the ORFs A, 2 and C
FIG. 3: Scheme for obtaining the plasmid pMB035
FIG. 4: Scheme for obtaining the plasmid pMB039
FIG. 5: Scheme for obtaining the plasmid pMB042
FIG. 6: Scheme for obtaining the plasmid pEL024
FIG. 7: Scheme for obtaining the plasmid pEL027
FIG. 8; Diagram of the plasmid pMB043
FIG. 9: Scheme for obtaining the plasmid pCD009
FIG. 10: Scheme for obtaining the plasmid pEL070
FIG. 11: Diagram of the plasmid pMB044
FIG. 12: Diagram of the plasmid pMB045
FIG. 13; Diagram of the plasmid pMB046
FIG. 14: Sequence of the NDV HN gene
FIG. 15: Scheme for obtaining the plasmid pEL030
FIG. 16: Diagram of the plasmid pMB047
FIG. 17: Diagram of the plasmid pEL033
FIG. 18: Diagram of the plasmid pMB048
FIG. 19: Diagram of the double expression cassette
FIG. 20: Diagram of the plasmid pCD011
FIG. 21: Diagram of the plasmid-pMB.049
______________________________________Sequence listing:______________________________________SEQ ID NO: 1 Oligonucleotide EL207SEQ ID NO: 2 Oligonucleotide EL208SEQ ID NO: 3 Oligonucleotide LP018SEQ ID NO: 4 Oligonucleotide LP020SEQ ID NO: 5 Sequence of the sequenced SalI-BamHI fragment (3841 bp; see FIG. 2)SEQ ID NO: 6 Oligonucleotide MB088SEQ ID NO: 7 Oligonucleotide MB089SEQ ID NO: 8 Oligonucleotide MB090SEQ ID NO: 9 Oligonucleotide MB091SEQ ID NO: 10 Oligonucleotide MB092SEQ ID NO: 11 Oligonucleotide MB093SEQ ID NO: 12 Oligonucleotide MB070SEQ ID NO: 13 Oligonucleotide MB071SEQ ID NO: 14 Sequence of the NDV HN gene (see FIG. 14)SEQ ID NO: 15 Oligonucleotide EL071SEQ ID NO: 16 Oligonucleotide EL073SEQ ID NO: 17 Oligonucleotide EL074SEQ ID NO: 18 Oligonucleotide EL075SEQ ID NO: 19 Oligonucleotide EL076SEQ ID NO: 20 Oligonucleotide EL077SEQ ID NO: 21 Oligonucleotide CD001SEQ ID NO: 22 Oligonucleotide CD002SEQ ID NO: 23 Oligonucleotide CD003SEQ ID NO: 24 Oligonucleotide CD004______________________________________

EXAMPLES
All the constructions of plasmids were carried out using the standard molecular biology techniques described by Sambrook J. et al. (Molecular Cloning: A Laboratory Manual2nd Edition. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York. 1989). All the restriction fragments used for the present invention were isolated using the "Geneclean" kit (BIO101 Inc. La Jolla, Calif.).
The virus used as parent virus may be chosen from the vaccinal strains described in J. R. Andreasen et al. (Avian Diseases 1990. 34. 64-656) or the strain T-20 12 8-66 obtained from Select laboratories 10026 Main Street P.O. Box 6 Berlin, Md. 21811, USA. It is also possible to use virulent strains such as the strain N-71851 (ATCC VR-783) or the strain 83-2 from USDA, which may he attenuated by known techniques, for example that described in WO-A-95/08622.
Example 1
Culture of the ILTV Virus
The ILTV virus is cultured on primary chicken kidney cells (CKC); these cells are cultured in MEM medium supplemented with 3 k foetal calf serum (FCS) in 75 cm. culture flasks (2.times.10.sup.5 cells/cm.sup.2) one or two (says before inoculation.
On the day of inoculation, a flask of 1000 doses of freeze-dried vaccine is resuspended in 10 ml of MEM medium supplemented with 1% FCS; about 0.5 ml of this solution is then deposited on the CKC culture. On the next day, the medium is changed, and the day after, is when the cytopathogenic effect (CPE) becomes generalized, the culture flasks are frozen at -70.degree. C.
The culture of the ILTV virus can also be carried out on immortalized chicken liver cells, and in particular on the LMH line (W. M. Schnitzlein et al., Avian Diseases 1994. 38. 211-217).
Example 2
Preparation of the ILTV Genomic DNA
After 2 freeze/thaw cycles, the ILTV culture (2 flasks of 75 cm.sup.2) is harvested and centrifuged at low speed (5000 rpm in a 20 rotor, Beckman JA21 centrifuge, for 5 minutes) to remove the large cell debris. The supernatant is then ultracentrifuged (100,000 rpm, TLA100.3 rotor, Beckman TL100 centrifuge, for 1 hour).
The pellet is then taken up in 1.6 ml of TEN-SDS (10 mM Tris pH 8.0; 1 mM EDTA; 0.5 M NaCl; 0.5% sodium dodecyl sulphate), and 35 .mu.l of a proteinase K solution at 20 mg/ml are then added; the solution is incubated for 3 to 4 hours on a water bath at 37.degree. C., and the DNA is then extracted 3 times with phenol/chloroform and once with chloroform, then it is precipitated with ethanol at -20.degree. C. After centrifugation, the pellet is rinsed with 70% ethanol, dried and resuspended in 200 .mu.l of TE (10 mM Tris pH 8.0; 1 mM EDTA). The nucleic acid concentration is then assayed in a spectrophotometer (OD.sub.260). This DNA solution can serve directly as template for the polymerase chain reaction (PCR) experiments; likewise, it can also be used in the transfection experiments for obtaining a recombinant virus.
Example 3
Isolation and purification of the Recombinant ILTV Virus
The donor plasmid composed of a cassette for expressing a polypeptide inserted between two flanking regions of the insertion locus is digested with a restriction enzyme allowing the linearization of the plasmid, then it is extracted with a phenol/chloroform mixture, precipitated with absolute ethanol, and taken up in sterile water. 24-Hour primary CKC cells are then transfected with the following mixture: 0.2 to 1 .mu.g of linearized donor plasmid +2 to 5 .mu.g of ILTV viral DNA (prepared as in Example 2) in 300 .mu.l of OptiMEM (Gibco BRL Cat# 041-01985H) and 100 .mu.g of LipofectAMINE diluted in 300 .mu.l of medium (final volume of the mixture=600 .mu.l). These 600 .mu.l are then diluted in 3 ml (final volume) of medium and plated on 5.times.10 CKC. The mixture is left in contact with the cells for 5 hours, then removed and replaced with 5 ml of culture medium. The cells are then left in culture for 3 to 8 days at +37.degree. C., then, when the cytopathogenic effect has appeared, they are frozen at -70.degree. C. After thawing and optionally sonicating, this viral population is cloned at limiting dilution in microplates (96 well) in order to isolate a homogeneous recombinant virus population. These plates are left in culture for 1 to 3 days, then the supernatant is harvested in an empty 96-well plate and the plate containing the supernatants is placed at 4.degree. C. or at -70.degree. C. The cells remaining in the other plates are then fixed with 95% acetone for 20 to 30 minutes at -20.degree. C., or for 5 minutes at room temperature. An indirect immunofluorescence (IIF) reaction is carried out with a monoclonal antibody directed against the polypeptide expressed in order to seek out the plaques expressing this polypeptide. Another cloning is then carried out in the same manner (at limiting dilution in 96-well plates) from the supernatant present in the wells of the slates placed at 40.degree. C. or at -70.degree. C. and corresponding to the wells having positive plaques in IIF. In general, 4 successive isolation cycles (limiting dilution, harvesting of the supernatant, monitoring of the cells by IIF, limiting dilution from the supernatant and the like) are sufficient to obtain recombinant viruses whose entire progeny exhibits a specific fluorescence. The genomic DNA of these recombinant viruses is characterized at the molecular level by conventional PCR and Southern blotting techniques using the appropriate oligonucleotides and DNA probes.
The isolation of the recombinant virus may also be carried out by hybridization with a probe specific for the inserted expression cassette. For that, the viral population harvested after transfection is diluted and deposited on CKC cells (cultured in a Petri dish) so as to obtain isolated plaques. After 1 hour of contact at 37.degree. C., the infection medium is removed and replaced with 5 ml of MEM medium containing 1% agarose, maintained superfused at 42.degree. C. When the agarose has solidified, the dishes are incubated for 48 to 72 hours at 37.degree. C. in a CO.sub.2 incubator until plaques appear. The agarose layer is then removed and the viral plaques are transferred onto a sterile nitrocellulose membrane having the same diameter as the Petri dish which served for the culture. This membrane is itself transferred onto another nitrocellulose membrane so as to obtain a reverse "copy" of the first transfer. The plaques transferred onto this latter copy are then hybridized, according to the customary techniques known to persons skilled in the art, with a digoxigenin-labelled DNA fragment of the expression cassette (DNA Labelling Kit, Boehringer Mannheim, CAT # 1175033). After hybridization, washes and contacting with the revealing substrate, the nitrocellulose membrane is placed in contact with an autoradiographic film. The images of positive hybridization on this membrane indicate the plaques which contain the recombinant ILTV viruses which have inserted the expression cassette. The plaques corresponding to these positive plaques are sterilely cut out from the first nitrocellulose membrane, placed in an Eppendorf tube containing 0.5 ml of MEM medium and sonicated to release the virions from the membrane. The medium contained in the Eppendorf tube is then diluted in MEM medium and the dilutions thus obtained serve to infect new cultures of CKC cells.
Example 4
Amplification of an ILTV Genomic Region
The oligonucleotides EL207 (SEQ ID NO:1) and EL208 (SEQ ID NO:2) served as primers for a first amplification by the polymerase chain reaction (PCR).
EL207 (SEQ ID NO:1): 5'AAGTATACTCGAAACTAGCGCAGTACTCTG 3'
EL2S08 (SEQ ID NO:2): 5'AGATGCGATACCATTTTTACTGCCArrTGG 3'
The first PCR was carried out in the presence of the oligonucleotides EL207 and EL208, of PCR buffer, DNTP, ILTV DNA, Taq polymerase and an anti-Taq antibody (TaqStart Antibody, Clontech Lab., Palo Alto, Calif., USA) in order to limit the non-specific amplifications. 35 cycles were performed (30 seconds at 94.degree. C., 30 seconds at 60.degree. C. and 8 minutes at 72.degree. C.). The placing of an aliquot of the reaction product on an electrophoresis gel made it possible to detect an amplified DNA band of about 7 kb.
A second PCR, carried out with the oligonucleotides LP018 (SEQ ID NO:3) (position from 2677 to 2696 on the sequence SEQ ID NO:S) and LP020 (SEQ ID NO:4), made it possible to amplify a fragment of 1190 bp.
LP018 (SEQ ID NO:3): 5'TCGTGTCTCTGCTATCACTG 3'
LP020 (SEQ ID NO:4): 5'AGCTCTCCATGGATCTAGCG 3'
Example 5
Cloning add characterization of this ILTV Genomic Region
The product of the first gene amplification reaction was purified by phenol/chloroform extraction and then digested with the restriction enzymes EcoRI and Sacd for 2 hours at 37.degree. C. The restriction enzymes were then inactivated by heating the tubes at 65.degree. C. for 20 minutes. The fragments resulting from this digestion were then ligated (overnight at 14.degree. C.) with the plasmid pBlueScriptII SK+(pBS SK+; Stratagene) digested with EcoRI and SacI; the analysis of the clones obtained after transformation of E. coli DH5.alpha.. bacteria and culture on dishes of ampicilin-supplemented medium made it possible to identify 3 EcoRI-SacI inserts of different size present in 3 different plasmids: a fragment of about 0.5 kb (plasmid pLP001), of 2.8 kb (plasmid pLP002) and of 1.8 kb (plasmid pLP003).
The amplification product of the second PCR reaction was purified as above, digested with the enzymes EcoRI and BamHI and cloned into the plasmid pBS SK+previously digested with EcoRI and SamRI to obtain the clone PLP011.
Partial sequencing of the insert present in pLP002 (on the right of the SalI site, see FIG. 1) and complete sequencing of that present in pLP003 and in pLP011 made it possible to identify two complete open reading frames (ORFS) (ORF A and ORF B), and the N-terminal part of another ORF (ORF C). The restriction map of this cloned genomic region and of the sequenced region, as well as the position on this map of the inserts of the clones pLP001, pLP002,.pLP003 and pLP011 are shown in FIG. 1; the 3841 bp sequence (SEQ ID NO:5) is shown in FIG. 2. The position and the amino acid sequence of the ORFs A, B and C are also shown in FIGS. 1 and 2 respectively.
The sequence between the STOP codon of the ORF A (position 1624 on SEQ ID NO:S) and the ATG codon of the ORF C (position 3606 on SEQ ID NO:5), comprising especially the ORF B, followed by the intergenic region between the ORFs 3 and C can be used to insert cassettes for expressing polypeptides into the ILTV genome. This sequence is called insertion locus. The insertion may be made with or without deletion in ORP B (see Example 6) or in the intergenic region (see Example 7); the deletion may also cover all or part of ORF B and all or part of the intergenic region (see Example 8).
Example 6
Construction of the donor plasmid pB035 for insertion into ORF B
The plasmid pLP003 (4665 bp) was digested with the enzymes EcoRI and XhoI; this digested plasmid was then treated with DNA polymerase (Klenow fragment) in the presence of dTP to make the ends blunt; after ligation and transformation of the E. coli bacteria, the clone pMB034 (4636 bp) was obtained; this cloning step made it possible to delete the cloning sites between EcoRI and XhoI in the plasmid pLP003.
The plasmid pMB034 was then digested with the enzymes HindIII and SphI; the 4.0 kbp fragment was then eluted and ligated to the oligonucleotides MS088 (SEQ ID NO:6) and MB089 (SEQ ID NO:7) previously hybridized. The plasmid pMP035 (39-90 bp) was thus obtained after transformation of E. coli bacteria (see scheme for obtaining pMB035 in FIG. 3).
MB088 (SEQ ID NO:6): 5'AGCTGAATTCAAGCTTCCCGGGGTCGACATG 3'
MB89 (SEQ ID NO:7): 5'TCGACCCC GG=AAC TTC 3'
This plasmid pMB035 therefore contains: (1) a homologous sequence in 5' of ORF B, (2) an inserted oligonucleotide sequence containing the unique EcoRI, SmaI, HindIII and SalI sites, and (3) a homologous sequence in 3' of the ORF B. This plasmid therefore makes it possible to introduce an expression cassette into the unique sites mentioned in (2) placed between the 2 flanking regions (1) and (3). The recombinant ILTV viruses obtained will have a deletion in ORF B (between the HindIII and SphI sites; amino acids 56 to 279 of ORF B deleted).
Example 7
Construction of the Donor Plasmid p=39 for Insertion unto the Intergenic Region Between the ORFs B and C
The plasmid pLP011 (3883 bp) was digested with the enzymes EcoRI and HindIII and ligated to the 1021 bp restriction fragment obtained by digesting the plasmid pLP003 (4665 bp) with the enzymes EcoRI and HindIII; the plasmid thus obtained (pMB036) has a size of 4892 bp. The plasmid pME036 was digested with the enzymes HindIII and ApaI; the digested plasmid was then treated with DNA polymerase (Klenow fragment) in the presence of dTP to make the ends blunt; after ligation and transformation of E. coli bacteria, the clone pMB037 (4862 bp) was obtained; this cloning step made it possible to delete the cloning sites between HindIII and ApaI in the plasmid pME036.
The plasmid pMB037 was digested with the enzymes NotI and BamRI; the digested plasmid was then treated with DNA polymerase (Klenow fragment) in the presence of dNTP to make the ends blunt; after ligation and transformation of E. coli bacteria, the clone pMB038 (bp) was obtained; this cloning step made it possible to delete the cloning sites between NotI and BamHI in the plasmid pMR037.
The plasmid pMB038 was then digested with the enzymes BglII and EcoRI; the 4.5 kbp fragment was then eluted and ligated to the oligonucleotides MB090 (SEQ ID NO:8) and MB091 (SEQ ID NO:9) previously hybridized. The plasmid pMB039 (bp) was thus obtained after transformation of E. coli bacteria (see scheme for obtaining pMB039 in FIG. 4).
ME090 (SEQ ID NO:8): 5'GATCGTCGACCCCGGGAAGCTTG 3'
MB091 (SEQ ID NO:9): 5'AATTCAAGCTTCCCGGGGTCGAC 3'
This plasmid pME039 therefore contains: (1) a homologous sequence in 5' in ORF B, (2) an inserted oligonucleotide sequence containing the unique EcoRI, SmaI, HindIII and SailI sites, and (3) a homologous sequence in 3' of the intergenic region between the ORFs B and C. This plasmid therefore makes it possible to introduce an expression cassette into the unique sites mentioned in (2) placed between the 2 flanking regions (1) and (3). The recombinant ILTV viruses obtained will have a 344 bp deletion in the intergenic region between the ORFs B and C (between the EcoRI and BglII sites).
Example 8
Construction of the Donor Plasmid pMB042 for Insertion into the Genomic Region Overlapping ORF B and the Intergenic Region Between the ORFs B and C
The 940 bp fragment obtained by digesting the plasmid pLP011 (3883 bp) with the enzymes BamHI and EcoRI, and the 1754 bp fragment obtained by digesting the plasmid pLP003 (4665 bp) with the enzymes EcoRI and SacI were ligated into the plasmid pBS SK+ digested with the enzymes BamHI and SacI; the plasmid thus obtained (pMB040) has a size of 5623 bp The plasmid pMB039 was digested with the enzymes BamHI and XhoI; the digested plasmid was then treated with DNA polymerase (Kienow fragment) in the presence of dNTP to make the ends blunt; after ligation and transformation of E. coli bacteria, the clone pMB041 (5576 bp) was obtained; this cloning step made it possible to delete the cloning sites between BamHI and XhoI in the plasmid pMB040.
The plasmid pMB041 was then digested with the enzymes HindIII and BglII; the 4.2 kbp fragment was then eluted and ligated to the oligonucleotides MB092 (SEQ ID No: 10) and MB093 (SEQ ID NC:1l) previously hybridized. The plasmid pMB042 (4234 bp) was thus obtained after transformation of E. coli bacteria (see scheme for obtaining pMB042 in FIG. 5).
MB092 (SEQ ID NO:10): 5'AGCTGAATTCAACCTTCCCGGGGTCGAC 3'
MS093 (SEQ ID NO:1I): 5'GATCGTCGACCCCGGGAAGCTTGAATTC 3'
This plasmid pMB042 therefore contains: (1) a homologous sequence in 5' of ORF B, (2) an inserted oligonucleotide sequence containing the unique EcoRI, SmaI, HindIII and SalI sites, and (3) a homologous sequence in 3' of the intergenic region between the ORFs B and C. This plasmid therefore makes it possible to introduce an expression cassette into the unique sites mentioned in (2) placed between the 2 flanking regions (1) and (3). The recombinant ILTV viruses obtained will have a 1366 bp deletion covering the C-terminal part of ORF B (the 339 c-terminal amino acids of ORF B) and the 5' part of the intergenic region between the ORFs B and C (between the HindIII and BglII sites, noted on FIG. 1).
Example 9
Construction of the Donor Plasmid pMB043 for the Insertion of a Cassette for Expressing the IBDV VP2 Gene Under the Control of the HCMV IE Promoter into the ORE B site isolation of vILTV 1
9.1--Cloning of the VP2 gene from the infectious bursal disease virus (IBDV) and construction of a cassette for expressing VP2 under the control of the HCMV IE promoter
The plasmid pEL004 (see FIG. 6;=plasmid pGH004 described in French patent application 92,13109) containing the IBDV VP2 gene in the form of a BamHI-HindIII cassette was digested with BamHI and XbaI in order to isolate the BamHI-XbaI fragment (truncated VP2 gene) of 1104 bp. This fragment was cloned into the vector pBS SK+, previously digested with XbaI and BamHI to give the 4052 bp plasmid pEL022 (FIG. 6). The vector pBS-SK+was digested with EcoRV and XbaI, then self-ligated to give pBS-SK.sup.- (modified). The plasmid pEL004 was digested with KpnI and HindIII in order to isolate the 1387 bp KpnI-HindIII fragment containing the complete IBDV VP2 gene. This fragment was cloned into the vector pBS-SK.sup.-, previously digested with KpnI and HindIII, to give the 4292 bp plasmid pEL023 (FIG. 6). The plasmid pEL022 was digested with BamHI and NotI in order to isolate the 1122 bp BamHI-NotI fragment (fragment A). The plasmid pBL023 was digested with BamHI and NotI in order to isolate the 333 bp BamHI-NotI fragment (fragment B). The fragments A and 3 were ligated together with the vector pPS-SK+, previously digested with NotI and treated with alkaline phosphatase, to give the 4369 bp plasmid pEL024 (FIG. 6.
The plasmid pEL024 was digested with NotI in order to isolate the 1445 bp NotI-NotI fragment This fragment was ligated with the plasmid pCMV.beta. (Clontech Cat# 6177-1, FIG. 7), previously digested with NotI, to give the 5095 bp plasmid pEL026 (FIG. 7), The plasmid pEL026 was digested with EcoRI, Sal and XmnI in order to isolate the 2428 bp EcoRI-Sal fragment. This fragment was ligated with the vector pBP-SX+, previously digested with EcoRI and SalI, to give the 5379 bp plasmid pEL027 (FIG. 7).
9.2--Construction of the donor plasmid pME043
The plasmid pEL027 was digested with EcoRI, SalI and XmnI in order to isolate the 2428 bp EcoRI-SalI fragment. This fragment was ligated into the plasmid pMB035 (see Example 6 and FIG. 3), previously digested with EcoRI and SalI, to give the 6414 bp plasmid pMB043 (FIG. 8).
9.3--Isolation and purification of the recombinant vILTV1 virus
The vILTV1 virus was isolated and purified after cotransfection of the DNA from the plasmid pMB036 previously linearized with the enzyme KpnI, and of the viral DNA, as described in Example 3. This recombinant contains a cassette HCMV-IE/IBDV VP2 in the ORF B of the ILTV virus partially deleted (see Examples 5 and 6).
Example 10
Construction of the Donor Plasmid pMB044 for the Insertion of a Cassette for Expressing the IBDV the ORF B Site and Isolation of vILTV2
10.1 Construction of pEL070 containing a cassette for expressing the IBDV VP2 gene under the control of the mC (Mouse CytomegaloVirus) immediate early TIE) promoter
The plasmid PCMV.beta. (Clontech Cat# 6177-1, FIG. 9) was digested with SalI and SmaI in order to isolate the 3879 bp SalI-SmaI fragment containing the lacZ gene as well as the polyadenylation signal of the SV40 virus late gene. This fragment was inserted into the vector pBS-SK+, previously digested with SalI and EcoRV, to give the 6625 bp plasmid pCD002 (FIG. 9). This plasmid contains the lacZ reporter gene but no promoter is situated upstream of this gene.
The MCMV virus, Smith strain was obtained from the American Type Culture Collection, Rockville, Md., USA (ATCC No. VR-194). This virus was cultured on Balb/C mouse embryo cells and the viral DNA from this virus was prepared as described by Ebeling A. et al. (J. Virol. 1983. 47. 421-433). This viral genomic DNA was digested with-PstI in order to isolate the 2285 bp PstI-PstI fragment. This fragment was cloned into the vector pBS-SK+, previously digested with PstI and treated with alkaline phosphatase, to give the plasmid pCD004 (FIG. 9). The plasmid pCD004 was digested with HpaI and PstI in order to isolate the 1389 bp HpaI-PstI fragment which contains the promoter/activating region of the murine cytomegalovirus Immediate-Early gene (Murine CytoMegaioVirus=MCMV) (Dorsch-Hasler K. et al. Proc. Natl. Acad. Sci. 1985. 82. 8325-8329, and patent application WO-A-87/03905). This fragment was cloned into the plasmid pCD002, previously digested with PstI and Smal, to give the 8007 bp plasmid pCD009 (FIG. 9).
A double-stranded oligonucleotide was obtained by hybridization of the following two oligonucleotides:
MB070 (SEQ ID NO:12)
5'CGAATTCACTAGTGTGTGTCTGCAGGCGGCCGCGTGTGTGTCGACGGTAC 3'
MB071 (SEQ ID NO:12)
5'CGTCGACACACACGCGGCCGCCTGCAGACACACACTAGTGAATTCGAGCT 3'
This double-stranded oligonucleotide was ligated with the vector pBS-SK+, previously digested with KpnI and SacI, to give the plasmid pEL067 (FIG. 10). The plasmid pCD009 was digested with PstI and SpeI in order to isolate the 1396 bp PstI-SpeI fragment. This fragment was ligated with the plasmid pEL067, previously digested with PstI and SpeI, to give the 4297 bp plasmid pEL068 (FIG. 10 ). The plasmid pEL024 (see Example 9, paragraph 9.1 and FIG. 6) was digested with HindIII and NotI in order to isolate the 1390 bp HindIII-NotI fragment (fragment A). The plasmid pEL027 (see Example 9, paragraph 9.1 and FIG. 7) was digested with HindIII and SalI in order to isolate the 235 bp HindIII-SalI fragment (fragment s). The fragments A and 2 were ligated together with the plasmid pEL068, previously digested with NotI and SalI, in order to give the 5908 bp plasmid pEL070 (FIG. 10). This plasmid therefore contains an expression cassette consisting of the MCMV IE promoter, the VP2 gene and the SV40 polyA signal.
10.2--Construction of the donor plasmid pMB044
The plasmid pEL070 was digested with EcoRI, SalI and XmnI in order to isolate the 303S bp EcoRI-SalI fragment. This fragment was ligated into the plasmid pMB035 (see Example 6 and FIG. 3), previously digested with EcoRI and SalI, in order to give the 7009 bp plasmid pMB044 (FIG. 11). This plasmid allows the insertion of the expression cassette MCMV-IE/IBDV-VP2 into the partially deleted ORF B of the ILTV virus.
10.3--Isolation and purification of the -vILTV2 recombinant virus
The vILTV2 virus was isolated and purified after cotransfection of the DNA from the plasmid pMB044 previously linearized with the enzyme BssHII and of the viral DNA, as described in Example 3. This recombinant contains a cassette MCMV-IE/IBDV VP2 in the partially deleted ORF B of the ILTV virus (see Examples 5 and 6).
Example 11
Construction of the Donor plasmid -PB45 for the Insertion of a Cassette for Expressing the IBDV VP2 Gene Under the Control of the MCMV IE Promoter into the Intergenic Site Between the ORFs B and C. and Isolation of vILTV3
The plasmid pEL070 (see Example 10 and FIG. 10) was digested with EcoRI, SalI and XmnI in order to isolate the 3035 bp EcoRI-SalI fragment. This fragment was ligated into the plasmid pMB039 (see Example 7 and FIG. 4), previously digested with EcoRI and SalI, to give the 7S40 bp plasmid pMB045 (FIG. 12) This plasmid allows the insertion of the expression cassette MCMV-IE/IBDV-VP2 into the partially deleted intergenic region between the ORFs B and C of the ILTV virus. The vILTV3 virus was isolated and purified after cotransfection of the DNA from the plasmid pMB045 previously linearized with the enzyme BssHII and of the viral DNA, as described in Example 3. This recombinant contains a cassette MCMV-IE/IBDV VP2 inserted into the partially deleted intergenic region between the ORFs B and C of the ILTV virus (see Examples 5 and 7).
Example 12
Construction of the Donor Plasmid pB49 for the Insertion of a Cassette for Expressing the IBDV VP2 Gene Under the Control of the M=TE Promoter into the Genomic Region Overlapping the ORF B and the Intergenic Site Between the ORFs B and C. and Isolation of the ILTV4
The plasmid pEL070 (see Example 10 and FIG. 10) was digested with EcoRI, SalI and XmnI in order to isolate the 3035 bp EcoRI-SalI fragment. This fragment was ligated into the plasmid pMB042 (see Example 8 and FIG. 5), previously digested with E. coli and SalI, to give the 7253 bp plasmid pMB046 (FIG. 13). This plasmid allows the insertion of the expression cassette MCMV-IE/IBDV-VP2 into the genomic region overlapping the ORF 3 and the intergenic genomic region between the ORFs B and C of the ILTV virus.
The vILTV4 virus was isolated and purified after cotransfection of the plasmid DNA pMB046 previously linearized with the enzyme BssHII and of the viral DNA, as described in Example 3. This recombinant contains a cassette MCMV-IE/IBDV VP2 inserted into the genomic region overlapping the ORF B and the intergenic genomic region between the ORFs B and C of the ILTV virus (see Examples 5 and 8).
Example 13
Construction of the Donor Plasmid 2ME047 for the Insertion of a Cassette for Expressing the NDV HN Gene into the ORF B and 4Isolation of vILTV5
13.1--Cloning of the Newcastle disease virus (NZV) HU gene
The constitution of a DNA library complementary to the genome of the Newcastle disease virus (NDV), Texas strain, was made as described by Taylor J. et al. (J. Virol. 1990. 64. 1441-1450). A clone pBR322 containing the end of the fusion gene (F), the entire haemagglutinin-neuraminidase (HN) gene and the beginning of the polymerase gene was identified as pHN01. The sequence of the NDV HN gene contained on this clone is presented in FIG. 14 (SEQ ID NO:14). The plasmid pHNOT was digested with SphI and XbaI in order to isolate the 2520 bp SphI-XbaI fragment. This fragment was ligated with the vector pUC19, previously digested with SphI and XbaI, in order to give the 5192 bp plasmid pHN02. The plasmid pHN02 was digested with ClaI and PstI in order to isolate the 700 bp ClaI-PstI fragment (fragment A). A PCR was carried out with the following oligonucleotides:
EL071 (SEQ ID NO:15) 5'CAGACCAAGCTTCTTAAATCCC 3'
EL073 (SEQ ID NO:-16) 5'GTATTCGGGACAATGC 3'
and the template pHN02 in order to produce a 270 bp PCR fragment. This fragment was digested with HindIII and PstI in order to isolate a 220 bp HindIII-PstI fragment (fragment B). The fragments A and B were ligated together with the vector pPS-SK+, previously digested with ClaI and HindIII, in order to give the 3872 bp plasmid pEL028 (FIG. 15). The plasmid pHN02 was digested with PsphI and ClaI in order to isolate the 425 bp BsphI-ClaI fragment (fragment C). A PCR was carried out with the following oligonucleotides:
EL074 (SEQ ID NO:17) 5'GTGACATCACTAGCGTCATCC 3'EL075 (SEQ ID NO:18)
5'CCGCATCATCAGCGGCCGCGATCGGTCATGGACGT 3'
and the template pHN02 in order to produce a 465 bp PCR fragment. This fragment was digested with BsphI and NotI in order to isolate the 390 bp SsphI-NotI fragment (fragment D). The fragments C and D were ligated together with the vector pBS-SK*, previously digested with ClaI and NotI, in order to give the 3727 bp plasmid pEL029bis (FIG. 15) . The plasmid pEL028 was digested with ClaI and SacIt in order to isolate the 960 bp ClaI-SaclI fragment (fragment E) . The plasmid pEL029bis was digested with ClaI and NotI in order to isolate the 820 bp ClaI-NotI fragment (fragment F). The fragments E and F were ligated together with the vector pBS-SK+, previously digested with NotI and SacII, in order to give the 4745 bp plasmid pEL030 (FIG. 15).
13.2--Construction of the plasmid pM047 containing a cassette for expressing NDV HN in the ORP B
The plasmid pEL030 was digested with NotI in order to isolate the 1780 bp NotI-NotI fragment (entire NDV HN gene) . This fragment was inserted into the NotI sites of the plasmid pMB044 (Example 10, FIG. 11) in place of the 1405 bp NocI-NotI fragment containing the gene encoding the IBDV VP2 protein; this cloning made it possible to isolate the 7385 bp plasmid pMB047 (FIG. 15). This plasmid allows the insertion of the expression cassette MCMV-IE/NDV-HN into the partially deleted OPF B of the ILTV virus.
13.3--Isolation and purification of the recombinant virus vILTV5
The virus vILTV5 was isolated and purified after cotransfection of the DNA from the plasmid pMB047 previously linearized with the enzyme BssHTI and of the viral DNA, as described in Example 3. This recombinant contains a cassette MCMV-IE/NDV HN in the partially deleted ORF B of the ILTV virus (see Examples 5 and 6).
Example 14
Isolation of Other Recombinant ILTV Viruses Expressing the NDV Virus EN Gene
In a manner similar to that described in Example 13 (paragraphs 13.2 and 13.3), the HN gene flanked by NotI sites (isolated from pEL030, FIG. 15) can replace the VP2 gene in the plasmids pME045 (FIG. 12) and pMB046 (FIG. 13) in order to give plasmids allowing the isolation of recombinant viruses having a cassette for expressing the NDV D gene in the intergenic part between the ORFs B and C, or overlapping the ORF B and the intergenic part between the ORFs B and C.
Example 15
Construction of the Donor Plasmid PDM048 for the Insertion of a Cassette for Expressing the NDV F gene into the ORF B and Isolation of vILTV6
15.1--Cloning of the Newcastle disease virus (NDV) F gene
A clone derived from the DNA library complementary to the Newcastle disease virus genome (see Example 13, paragraph 13.1) and containing the entire fusion (P) gene was called pNDV81. This plasmid has been previously described and the sequence of the NDV F gene present on this close has been published (Taylor J. et al J. Virol. 1990. 64. 1441-1450). The plasmid pNDV81 was digested with NarI and PstI in order to isolate the 1870 bp NarI-Pstl fragment (fragment A). A PCR was carried out with the following oligonucleotides:
EL076 (SEQ ID NO:19): TGACCCTGTCTGGATGA 3'
EL077 (SEQ ID NO:20):
5'GGATCCCGGTCCACACATTGCGCCGCAAGATGGGC 3'
and the template pNDV81 in order to produce a 160 bp fragment. This fragment was digested with PstI and SalI in order to isolate the 130 bp PstI-SalI fragment (fragment B). The fragments A and B were ligated together with the vector pBS-SK+, previously digested with ClaI and SalI, in order to give the 4846 bp plasmid pEL033 (FIG. 17).
15.2--Construction of the plasmid pMB048 containing a cassette for expressing the NDV F gene in the ORF 2
The plasmid pEL033 was digested with NotI in order to isolate the 1935 bp NotI-NotI fragment (entire F gene). This fragment was inserted into the NotI sites of the plasmid pMB044 (Example 10, FIG. 11) in place of the 1405 bp NotI-NotI fragment containing the gene encoding the IBDV VP2 protein; this cloning made it possible to isolate the 7538 .bp plasmid pMB048 (FIG. 18). This plasmid allows the insertion of the expression cassette MCMV-IE/NDV-F into the partially deleted ORF B of the ILTV virus.
15.3--Isolation and purification of the recombinant virus vILTV6
The vILTV6 virus was isolated and purified after cotransfection of the DNA from the plasmid pMB048 previously linearized with the enzyme BssHII and of the viral DNA, as described in Example 3. This recombinant contains a cassette MCMV-IE/NDV F in the partially deleted ORF B of the ILTV virus (see Examples S and 6).
Example 16
Construction of a Donor Plasmid for the Insertion of a Double Cassette for Expressing the NDV gN and F Genes into the ORF B Site and Isolation of a Recombinant ILTV Virus
A double cassette for expressing two genes, for example the NDV virus HN and F genes, may be constructed. Such a construct is schematically represented in FIG. 19. In this construct, the 5' end of the two promoters are adjacent so that the transcription of the two genes occurs in opposite directions. One of the two promoters is preferably a CMV IE promoter and the other promoter (called associated promoter) is any promoter active in eucaryotic cells, of viral (and in particular of herpes virus) origin or otherwise. In this configuration, the associated promoter is activated by the activating region of the CMV IE promoter. This double expression cassette may then be inserted into one of the 3 donor plasmids described above (pMB035, pMB039 and pMB042 described in Examples 6, 7 and 8 and represented in FIGS. 3, 4 and 5 respectively). The isolation of the recombinant viruses is carried out in the same manner as above (see Example 3).
Example 17
Construction of the Donor Plasmid pMB049 for the Insertion of a Cassette for Expressing the MDV gB Gene into the ORF B and Isolation of vlLTV7
17.1--Cloning of the Marek's disease virus gB gene
The 3.9 kbp EcoRI-SalI fragment of the genomic DNA from the MDV virus strain RB1B containing the MDV gB gene (sequence published by Ross N. et al. J. Gen. Virol. 1989. 70. 1739-1804) was ligated with the vector pUC13, previously digested with EcoRI and SalI, in order to give the 6543 bp plasmid pCD007 (FIG. 20). This plasmid was digested with SacI and XbaI in order to isolate the 2260 bp SacI-XbaI fragment (central part of the gB gene=fragment A). A PCR was carried out s with the following oligonucleotides:
CD001 (SEQ ID NO:21):
5'GACTGGTACCGCGGCCGCATGCACTT7ITAGGCGGAATTG 3'
CD002 (SEQ ID NO:22) 5'TTCGGGACATTTTCGCGG 3'
and the template pCD007 in order to produce a 222 bp PCR fragment. This fragment was digested with KpnI and XbaI in order to isolate a 190 bp KpnI-XbaI fragment (5'end of the gB gene=fragment B). Another PCR was carried out with the following oligonucleotides:
CD002 (SEQ ID NO:23): 5'TATATGGCGTTAGTCTCC 3'
CD004 (SEQ ID NO:24)
5'TTGCGAGCTCGCGGCCGCTTATTACACAGCATCATCTTCTG 3'
and the template pCDC07 in order to produce a 195 bp PCR fragment. This fragment was digested with SacI and SacI in order to isolate the 162 bp SacI-SacII fragment (3' end of the gB gene fragment C). The fragments A, B and C were ligated together with the vector pSS-SK+, previously digested with KpnI and SacI, in order to give the 5485 bp plasmid pCD011 (FIG. 20).
17.2--Construction of the plasmid pM049 containing a cassette for expressing the MDV gB gene in the ORF B
The plasmid pCD011 was digested with NotI in order to isolate the 2608 bp NotI-NotI fragment (entire MDV gB gene) . This fragment was inserted into the NotI sites of the plasmid pMB044 (Example 10, FIG. 11) in place of the 1405 bp NotI-NotI fragment containing the gene encoding the IBDV VP2 protein; this cloning made it possible to isolate the 8213 bp plasmid pMB049 (FIG. 21). This plasmid allows the insertion of the expression cassette MCMV-IE/MDV-gB into the partially deleted ORF B of the ILTV virus.
17.3--Isolation and purification of the recombinant virus vILTV7
The vILTV7 virus was isolated and purified after cotransfection of the DNA from the plasmid pMB049 previously linearized with the enzyme BssHII and of the viral DNA, as described in Example 3. This recombinant contains a cassette MCMV-IE/MDV gB in the partially deleted ORF B of the ILTV virus (see Examples S and 6).
Example 18
Construction of a Donor Plasmid for the Insertion of a Cassette for Expressing IBV gene(s) into the ORF B and Isolation of the Recombinant ILTV Virus
According to the same strategy as that described above for the insertion of single cassettes (Examples 9, 10, 11, 12, 13, 14, 15 and 17) or for the insertion of double cassettes (Example 18) into the three sites described above (Examples 6, 7 and 8), it is possible to prepare recombinant ILTV viruses expressing, at a high level, the Membrane (M) or Spike (S) proteins, or part of Spike (S1 or S2), or Nucleocapsid (N) of the avian infectious bronchitis virus (IBV). in particular, a double expression cassette was prepared with the S gene under the control of the CMV IE promoter and the M gene under the control of the associated promoter.
Example 19
Construction of Donor Plasmids for the Insertion of Cassettes for Expressing a Gene or Genes of Other Avian Pathogenic Agents or of an Immunomodulatory Peptide into the Three sites Described and Isolation of the Recombinant ILTV Viruses
According to the same strategy as that described above for the insertion of single cassettes (Examples 9, 10, 11, 12, 13, 14, 15 and 17) or for the insertion of double cassettes (Example 18) into the three sites described above (Examples 6, 7 and 8), it is possible to prepare recombinant ILTV viruses expressing, at a high level, immunogenes from CAV (and especially a double cassette for expressing genes encoding VP1 and VP2), from the chicken pneumovirosis virus, or other avian pathogenic agents, or alternatively immunomodulatory peptides and especially cytokines.
Example 20
Production of Vaccines
The recombinant viruses obtained according to the invention are produced on embryonated eggs. The viral solution harvested is then diluted in a stabilizing solution for freeze-drying, distributed at the rate of 1000 vaccinal doses per vial, and finally freeze-dried.
__________________________________________________________________________# SEQUENCE LISTING- <160> NUMBER OF SEQ ID NOS: 24- <210> SEQ ID NO 1<211> LENGTH: 30<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 1# 30 agcg cagtactctg- <210> SEQ ID NO 2<211> LENGTH: 30<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 2# 30 ttac tgccatttgg- <210> SEQ ID NO 3<211> LENGTH: 20<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 3# 20 actg- <210> SEQ ID NO 4<211> LENGTH: 20<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 4# 20 agcg- <210> SEQ ID NO 5<211> LENGTH: 3841<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 5- gtcgactgcc agtggaagat aaaatccctt ctcaattttt aacgataaat ga - #acactgag 60- tccatggttt cgaataaagc gacgcattcc caagattccc atatcggtat at - #ttcgagga 120- gagcaaatga aaagacagaa gcccgcaagt ctcgtatcag caaactaata tt - #tagggcgc 180- tctgaaaggc ggtatttgta tgtacagggg ttgggcaatc cacaccctcg ta - #atcgcatt 240- acacataagg tgtgacatgg tggtagcccc aaaattttat gcacaggcta ca - #gttgtata 300- taaaccgcgc ggatgtttag gagatgttca gagacaccgg gggagggaac ga - #acgtacac 360- acgaattacg ttcgttggaa gatggatttg gatactgcga caagaagtaa at - #gtttgctc 420- cgactaactt taggaaagca tgggatttcg gtggtttccc ccattgccaa aa - #acatgcgt 480- gggattctgc aacactctgt gctggctttt atgaatgact gcatagtaat tt - #cctgttcc 540- gctccgtttg ggatggcttt cttaaaaatc aagtggcaat tgttcgactc at - #ttgaatat 600- ttatcagacg atgagagtat actacctatc atgctcaata atactataca cc - #agcgccct 660- ggagacctct tggattttct gtgggactct aagaaaaaaa ctgtcggaat ac - #caacttta 720- gccacattta ctatatcaga aagtttcaaa tccgatgaaa ctagggctgt ac - #acagactg 780- aaagtctgtc gcgagataga agagagcgcg tcgtgccccc aaaatacgga aa - #taagcacg 840- aaattcaagt actcttcatc ggatggacct cctatatacc tgcctcgttc cg - #ataaggca 900- tgtcgggcct cgctggaaca gtattcgttc aatgaaatta caaagtggct tt - #cgaagatc 960- cctaaagata actcaattac agtcacactc acaagagagt atgtcacgtt ct - #cgtccgca1020- gaagacgagc aacgcctaac ctttaacgcg aaatggttcg gcgaccagac aa - #gtattgta1080- tcgtctgcgt caattttgtc tcagctatgt ggccatgaac ctgcgcctaa aa - #aaagagag1140- ctctcaagcc gagccatcgg taagaaacta aaagaagccc gccattatcg ct - #gttcatgg1200- ggacaaagat gcctgcccca ttgtagtatc actctccaga cccggatctc tg - #aaacagtc1260- actagggtgg ctgaaaagcg gtccttgggg acaccgtgtc ttacatttta ca - #aagactct1320- gtgaatagtc ttggagtaga actctctgaa agaggaggag aagaattagc tg - #ctgggatt1380- tttttccttt ccgcgttttc tgcagatgga gcaatctctg agcaatgcca tg - #atgactca1440- gacacagcca tgcacgaatt tttggcggag gaggagcgcc tcatacaaca ga - #ccacgcta1500- tcccattcca actcaagtaa gaagaggtcg ctcgaaaatt acgaggacac cg - #atattagc1560- ccatcccacc acccacaaaa gcgggggaaa ttaaagaacg gctcacttgc ac - #ggaagaac1620- taaaatcgtc tcctcgcgtc taccggggag cttagtttac tgccagcgtt tg - #tgacccaa1680- gtgtgcaccg tgatttcaac tctaccgcaa ctatgacggg ggctaccata at - #tgatccat1740- tcgcaccgcc caagggtaaa tggtggccgt tcaatttgaa cgggatagtt tt - #ttccttga1800- tgatgtttat tatattttta gcctggatac tgcgcattga ctatggactc gc - #gttagctt1860- acattacctg ggcaaagctt tctacgaaag aggcaagatt cggatggatg at - #cggactat1920- tggtggctac gattactgcc agttttctgg atattcaata ctcggctcac aa - #aacagtcc1980- gaatttattt tctggtgatg ctttctatgg cgagcgcagt aataattata tt - #tctcatcc2040- attccaacag ccccaatgcc gcgatagtta tggggctatt ctccgttttt tc - #ggaagttt2100- gcttgatact gattttggga tttcaactcc gaccggccat tttctgcagc at - #aaacatga2160- cctggctctt tcttgaagcc atgctcctaa atttgaccgt actttcttgg aa - #cttgatgc2220- accttcgagt aaaccctaga tacttggaac cgttggccct ttttactatt aa - #cattttgg2280- catacaatcc ctctcgtttt ttgctcaaga gtgatttttt taagaccagc at - #gataactc2340- tgacgggcag tatagaacca ttttccgaag ataacacgat ttatacaccc cc - #aagacaac2400- ataaagatac tcgcccttca ctgaatgacg gaccaactcg gtggtgcggt ta - #ctgtattc2460- tcgtatctac aacattggtt actgccgctt tcgcctgcac attatcatta cc - #gttcctgg2520- gcaaagattt aggtactgta cgcatcggca tgcaaacgaa ttttaaaatc ct - #catggtag2580- cgtgcggttc ggttttggca tttggatcta cttgcattgg aaaactatgc aa - #aatccata2640- tcgttgtatg gttcgtgata agcatactat taaccttcgt gtctctgcta tc - #actgatta2700- agttgattga ggacccagct gacattccat ttggtgtcat tcttgcatcg gt - #ttcttgtc2760- tgtttcaagt tggagccctc tttttccgag aattaaaaac ggccacccat ac - #acaaggat2820- ggatttcatg cgcccttctt ttctgctccc ttttcattcc aattgccgcg cc - #gcttgtgt2880- gtgagtacaa gctctgaatt cttgtctaag ggagacgtgc caattctgac aa - #cgccctaa2940- gccaacacaa atgccttcct caatttacgc gctagcttga acattccaac aa - #gatgaatg3000- catcgctaac atggcttgct ttaactttta aagttacctt gagtttcagc ct - #gctctgaa3060- tgttttcctc caaacctaag atgttcttag ttgtacgatt tttgtattgc ga - #ataccaca3120- tcatccagta ccaaagtact aatggtcggc aatcgaatag aaatcaaaca tg - #gcacgcag3180- gagactgtcg cctcgaaact gccttcgccg agctgcagaa attcggaacg ag - #gacattag3240- aaacagatct acattccacc gagcaaccgt ttactggaga aaatgctaga ga - #ataaccta3300- acaggcggcc ttcaactttc actacttaac aactggaact atattgtcga gg - #attgtcat3360- agtcacgaac atgatgcagt attgcttcgg atgcaatcta tattttgaca tt - #gttaataa3420- agcacatgta ctatgcaaag tttgcattcg tgtaattcgt cgagagagaa ag - #ttacaagt3480- tcgattctct cgcgctagga gtgtttccac gtgcgaaaac gcaaaaattt tc - #atattatt3540- cgggcggact gtgtccatag tagctaaatt accgcgatct ggagactagg gc - #attcacga3600- ctcaacatgc agcatcagag tactgcgcta gtttcgagta tacttttgct ct - #tgagcctg3660- caaagccttg cgtttgaatt tttctgtgat ccgccacacg tttttcgagg gc - #agctcggt3720- gaccccattc tattgcaatg cttcagcgac agacctctaa cccacgaaga at - #ctgtaaaa3780- gtagaagtaa ttcgacaccc agccagctta gttgaaactg cgctaagcgc ct - #acgggatc3840# 3841- <210> SEQ ID NO 6<211> LENGTH: 31<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 6# 31 cccg gggtcgacat g- <210> SEQ ID NO 7<211> LENGTH: 23<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 7# 23tgaa ttc- <210> SEQ ID NO 8<211> LENGTH: 23<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 8# 23aagc ttg- <210> SEQ ID NO 9<211> LENGTH: 23<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 9# 23ggtc gac- <210> SEQ ID NO 10<211> LENGTH: 28<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 10# 28 cccg gggtcgac- <210> SEQ ID NO 11<211> LENGTH: 28<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 11# 28 aagc ttgaattc- <210> SEQ ID NO 12<211> LENGTH: 50<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 12# 50tgtgtc tgcaggcggc cgcgtgtgtg tcgacggtac- <210> SEQ ID NO 13<211> LENGTH: 50<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 13# 50cggccg cctgcagaca cacactagtg aattcgagct- <210> SEQ ID NO 14<211> LENGTH: 2521<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 14- tgctacctga tgtacaagca aaaggcacaa caaaagacct tgttatggct tg - #ggaataat 60- acccttgatc agatgagagc cactacaaaa atatgaatac aaacgagagg cg - #gaggtatc 120- cccaatagca atttgcgtgt aaattctggc aacctgttaa ttagaagaat ta - #agaaaaaa 180- ccactggatg taagtgacaa acaagcaata cacgggtaga acggtcggag aa - #gccacccc 240- tcaatcggga atcaggcctc acaacgtcct ttctaccgca tcatcaatag ca - #gacttcgg 300- tcatggaccg tgcagttagc agagttgcgc tagagaatga agaaagagaa gc - #aaagaata 360- catggcgctt tgtattccgg attgcaatct tacttttaat agtaacaacc tt - #agccatct 420- ctgcaaccgc cctggtatat agcatggagg ctagcacgcc tggcgacctt gt - #tggcatac 480- cgactatgat ctctaaggca gaagaaaaga ttacatctgc actcagttct aa - #tcaagatg 540- tagtagatag gatatataag caggtggccc ttgagtctcc attggcgttg ct - #aaacactg 600- aatctgtaat tatgaatgca ataacgtctc tctcttatca aatcaatgga gc - #tgcaaata 660- atagcgggtg tggggcacct gttcatgacc cagattatat cggggggata gg - #caaagaac 720- ttattgtgga tgacgctagt gatgtcacat cattctatcc ctctgcgttc ca - #agaacacc 780- tgaactttat cccggcacct actacaggat caggttgcac tcggataccc tc - #attcgaca 840- taagcgctac ccactactgt tacactcaca atgtgatatt atctggttgc ag - #agatcact 900- cacactcata tcagtactta gcacttggcg tgcttcggac atctgcaaca gg - #gagggtat 960- tcttttctac tctgcgttcc atcaatttgg atgacagcca aaatcggaag tc - #ttgcagtg1020- tgagtgcaac tcccttaggt tgtgatatgc tgtgctctaa aatcacagag ac - #tgaggaag1080- aggattatag ttcaattacg cctacatcga tggtgcacgg aaggttaggg tt - #tgacggtc1140- aataccatga gaaggactta gacgtcataa ctttatttaa ggattgggtg gc - #aaattacc1200- caggagtggg gggtgggtct tttattaaca accgcgtatg gttcccagtc ta - #cggagggc1260- taaaacccaa ttcgcctagt gacaccgcac aagaagggag atatgtaata ta - #caagcgct1320- acaatgacac atgcccagat gaacaagatt accagattcg gatggctaag tc - #ttcatata1380- agcctgggcg gtttggtgga aaacgcgtac agcaggccat cttatctatc aa - #ggtgtcaa1440- catctttggg cgaggacccg gtgctgactg taccgcctaa tacaatcaca ct - #catggggg1500- ccgaaggcag agttctcaca gtagggacat ctcatttctt gtaccagcga gg - #gtcttcat1560- acttctctcc tgctttatta taccctatga cagtcaacaa caaaacggct ac - #tcttcata1620- gtccttacac attcaatgct ttcactaggc caggtagtgt cccttgtcag gc - #atcagcaa1680- gatgccccaa ctcatgtgtc actggagttt atactgatcc gtatccctta gt - #cttccata1740- ggaaccatac cttgcggggg gtattcggga caatgcttga tgatgaacaa gc - #aagactta1800- accctgtatc tgcagtattt gataacatat cccgcagtcg cataacccgg gt - #aagttcaa1860- gccgtactaa ggcagcatac acgacatcga catgttttaa agttgtcaag ac - #caataaaa1920- catattgcct cagcattgca gaaatatcca ataccctctt cggggaattc ag - #gatcgttc1980- ctttactagt tgagattctc aaggatgatg ggatttaaga agcttggtct gg - #ccagttga2040- gtcaactgcg agagggtcgg aaagatgaca ttgtgtcacc ttttttttgt aa - #tgccaagg2100- atcaaactgg ataccggcgc gagcccgaat cctatgctgc cagtcagcca ta - #atcagata2160- gtactaatat gattagtctt aatcttgtcg atagtaactt ggttaagaaa aa - #atatgagt2220- ggtagtgaga tacacagcta aacaactcac gagagatagc acgggtagga ca - #tggcgagc2280- tccggtcccg aaagggcaga gcatcagatt atcctaccag agtcacatct gt - #cctcacca2340- ttggtcaagc acaaactgct ctattactgg aaattaactg gcgtaccgct tc - #ctgacgaa2400- tgtgacttcg accacctcat tatcagccga caatggaaga aaatacttga at - #cggccact2460- cctgacactg agaggatgat aaagctcggg cgggcagtac accagactct cg - #accaccgc2520# 2521- <210> SEQ ID NO 15<211> LENGTH: 22<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 15# 22atc cc- <210> SEQ ID NO 16<211> LENGTH: 16<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 16# 16- <210> SEQ ID NO 17<211> LENGTH: 21<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 17#21 catc c- <210> SEQ ID NO 18<211> LENGTH: 36<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 18# 36 cgcg atcggtcatg gacagt- <210> SEQ ID NO 19<211> LENGTH: 18<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 19# 18 ga- <210> SEQ ID NO 20<211> LENGTH: 36<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 20# 36 attg cggccgcaag atgggc- <210> SEQ ID NO 21<211> LENGTH: 40<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 21# 40 gcat gcacttttta ggcggaattg- <210> SEQ ID NO 22<211> LENGTH: 18<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 22# 18 gg- <210> SEQ ID NO 23<211> LENGTH: 18<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 23# 18 cc- <210> SEQ ID NO 24<211> LENGTH: 41<212> TYPE: DNA<213> ORGANISM: Infectious Laryngotracheitis Virus- <400> SEQUENCE: 24# 41 gctt attacacagc atcatcttct g__________________________________________________________________________

Number	Date	Country
WO 9002803	Mar 1990	WOX
WO 9203554	Mar 1992	WOX
WO 9325655	Dec 1993	WOX
WO 9600791	Jan 1996	WOX
WO 9629396	Sep 1996	WOX

Avian recombinant live vaccine using, as vector, the avian infectious laryngotracheitis virus

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Entry
Kingsley et al, Virology 203:336-343, 1994.
Wilson et al, Virology 199:393-402, 1994.
A.M. Griffin, "Identification of 21 Genes of Infectious Laryngotracheitis Virus Using Random Sequencing of Genomic DNA", J. Gen Viro l, vol. 70 (1989) pp. 3085-3089.
M.A. Johnson, et al, "Gallid Herpesvirus 1 (Infectious Laryngotracheitis Virus): Cloning and Physical Maps of the SA-2 Strain", Archives of Virology, vol. 119 (1991) pp. 181-198.
Martha A. Wild, et al, "A Genomic Map of Infectious Laryngotracheitis Virus and The Sequence and Organization of Genes Present In The Unique Short and Flanking Regions", Virus Genes, vol. 12:2 (1996) pp. 107-116.