Bacterial genes

The present invention relates to novel bacterial genes, and to novel strains of the bacterium Bacillus thuringiensis; and to uses therefor.
The organism Bacillus thuringiensis produces a protein crystal endotoxin which kills insect larvae. It is not however toxic to mammals. It is thus very useful as an agricultural insecticide, in particular against Lepidoptera, Coleoptera and Diptera. Strains of Bacillus thuringiensis have been used as agricultural insecticides for a number of years.
The most extensively characterised strain of Bacillus thuringiensis active against coleopteran pests is Bacillus thuringiensis variety (var.) tenebrionis, as deposited in the German Collection of Microorganisms (Deutsche Sammlung von Microorganism) under the reference DSM 2603. We have now discovered novel strains of Bacillus thuringiensis having generally similar properties to DSM 2803, but distinguished therefrom by specific insecticidal activity against coleopteran larvae of the genus Diabrotica, as well as by toxicity to lepidopteran larvae. The novel properties of these strains appear to arise from novel genes that they contain.
According to the present invention we provide the novel strains JHCC 4835 and JHCC 4353 of Bacillus thuringiensis, deposited at the National Collections of Industrial and Marine Bacteria under the accession numbers NCIMB 40091 and 40090, respectively.
We further provide novel .delta.-endotoxin genes capable of isolation from said strains JHCC 4835 and JHCC 4353. Such genes may be located either on the bacterial chromosome or on a plasmid. In a further aspect, our invention comprises recombinant DNA homologous with the DNA sequence set out in FIGS. 5A-5U hereof and coding for a novel insecticidally-active endotoxin of molecular weight about 81.2 kilodaltons (hereinafter referred to as "the 81 kD endotoxin"). In specific embodiments of our invention, recombinant DNA coding for insect endotoxins has been cloned from Bacillus thuringiensis JHCC 4835 into E. coli strains BL21/pJH11 and MC1022/pJH12, deposited at the National Collections of Industrial and Marine Bacteria under the accession numbers 40275 and 40278 respectively. The endotoxin gene in the latter deposit is lepidopteran-specific. We further provide recombinant DNA coding for a second lepidopteran-specific endotoxin gene derived from Bacillus thuringiensis strain JHCC 4835, which has been deposited in the form of a bacteriophage Lambda EMBL4 clone CL5 with the National Collections of Industrial and Marine Bacteria under the accession number 40279.
Recombinant DNA according to our invention may comprise genes of varying lengths encoding insecticidally-active proteins. When cloning DNA from the bacterial chromosome it is convenient to use bacteriophage Lambda vectors or other cloning vectors that sequester the recombinant DNA from host cell enzymes that might cause homologous recombination.
We further provide novel insecticidal compositions characterised in that they contain the .delta.-endotoxin produced by said strains JHCC 4835, JHCC 4353 and E. coli BL21/pJH11, and a method of protecting plants from insect attack which comprises exposing the larvae to a .delta.-endotoxin produced by the said strains JHCC 4353, JHCC 4835 and E. coli BL21/pJH11.
The strains JHCC 4835 and JHCC 4353 were soil isolates from Marshall, Iowa, U.S.A. and Dallas, Iowa, U.S.A. respectively. In colony morphology they are generally similar to DSM 2803, and to strain HD-1 which is insecticidal to lepidopteran larvae.
The morphology of the strains of the invention is compared with that of known strains in Table 1.
Biochemical properties of the new and the known strains are compared in Tables 2-4. It will be seen that there are many similarities between the strains.
In view of these biochemical similarities it is surprising that the gene encoding the 81 kD endotoxin in E. coli BL21/pJH11 shows very little DNA sequence homology to the B. thuringiensis var. tenebrionis endotoxin gene of DSM 2803. Use of the coding sequence for the B. thuringiensis var. tenebrionis endotoxin gene as a DNA probe under relatively mild stringency conditions (3.times.Standard Saline Citrate at 37.degree. C.) is not sufficient to generate a signal from the coding sequences for this endotoxin gene in strains JHCC 4835 and JHCC 4353. Similarly, use of the coding sequence for the lepidopteran-specific CryIA(c) (this system of nomenclature is described by Hofte and Whitely in Microbiol. Reviews, 53, 1989 at pages 242-255) endotoxin gene from a Bacillus thuringiensis var. kurstaki strain is not sufficient to generate a DNA hybridisation signal from the coding sequence for the 81 kD endotoxin. Also, use of the novel gene coding sequence as a DNA probe does not generate a hybridisation signal from the tenebrionis gene or the three CryIA genes.
The newly-discovered B. thuringiensis strains JHCC 4853 and JHCC 4353 show a significantly different specificity of insecticidal activity as compared with DSM 2803. In particular, 4385 and 4353 show more selective activity against beetles than known coleopteran-active B. thuringiensis strains in that they are specifically larvacidal to Diabrotica spp.. In addition, strains JHCC 4835 and JHCC 4353 are larvacidal to lepidopteran pests whereas strain DSM 2803 is not. On the molecular level, the newly discovered gene in Bacillus thuringiensis strains JHCC 4835 and 4353 encode a gene product which shows a significantly different spectrum of insecticidal activity as compared with the coleopteran-specific endotoxin gene in DSM 2803 or the lepidopteran-specific CryIA endotoxin genes in HD1 and other var. kurstaki strains.
The new endotoxin gene encodes an 81.2 kilodalton endotoxin that has a completely novel activity spectrum: it is toxic to both lepidopteran and coleopteran larvae. This is particularly surprising since the Bacillus thuringiensis strain from which it is derived is not toxic to all Coleoptera, but rather is Diabrotica-specific. Possible explanations for this finding may include: a low concentration of this protein in the crystal that the microorganism produces; inaccessibility of the protein in the crystal; presence of the toxin in the crystal as a protoxin which is not converted to the active form in the gut of certain insects; or other so far unrecognised factors.
The Bacillus thuringiensis strains according to the invention may be prepared in any quantity required by fermenting a sample of NCIB 40091 or 40090 obtained from the National Collections of industrial and Marine Bacteria under suitable conditions in an appropriate medium. Such conditions and media are well known to the art. The media will, for example, generally contain a nitrogen source (eg fish protein) and a carbohydrate source such as starch. Suitable conditions include a temperature in the range 15-45.degree. C., and an approximately neutral pH. Fermentation may be conveniently carried out in batches, typically for periods of 3-5 days.
E. coli strains carrying cloned endotoxin genes according to the invention may be prepared by growing cells to stationary phase on solid nutrient media (eg L agar) prior to scraping cell growth from the medium surface, lyophilising, and freezing before thawing and weighing out the insecticidal material.
Insecticidal compositions according to the invention may be obtained from the fermentation liquor by concentration, for example by centrifugation or filtration followed by addition of any desired and appropriate formulating agents. Formulating agents which may be useful include for example surface active agents, eg, wetting agents: solid diluents, dispersing agents and UV stabilisers. If desired, solid formulations may be prepared by known methods.
The process of the invention is generally carried out by treating (eg spraying) plants infested or liable to infestation by insects with insecticidal compositions as described above diluted with a diluent such as water. The insecticidal agent is the toxic .delta.-endotoxin: if desired this may be applied to the plants or insects infesting them independently of the bacteria that produce it. Separation of the crystalliferous protein from the bacteria Bacillus thuringiensis, or of the cloned gene product from the bacterium E. coli, is however generally not necessary.
Another method of carrying out the process of the invention is to arrange for the plant susceptible to insect attack to produce the .delta.-endotoxin in situ. This is done by cloning a .delta.-endotoxin gene from strain NCIB 40090 or NCIB 40091, by known means; providing it with a promoter sequence (for example the CaMV35S promoter) which will cause expression of the gene in plants; and transforming the plant by known methods. Suitable transformation methods may include the use of Ti plasmid vectors for Agrobacterium-mediated transformation of dicots, or direct DNA uptake methods such as embryo microinjection, or use of microprojectiles followed by protoplast regeneration. To obtain the greatest degree of expression of the gene the promoter sequence should be selected and engineered appropriately and other factors (for example codon usage) should be adapted to maximise expression in planta.
Coleopteran larvae which are combated by the process of the invention may be of various species. As noted above, the Bacillus thuringiensis strains of the invention kill only Diabrotica, including those shown in Table 5A below: while use of the insecticidal product from the cloned gene of our invention will kill other coleoptera as well.
TABLE 5A______________________________________Common Name Latin Name______________________________________Western Corn Rootworm Diabrotica virgifera virgifera Southern Corn Rootworm Diabrotica undecimpunctata howardi Northern Corn Rootworm Diabrotica barberi Mexican Corn Rootworm Diabrotica virgifera zea Banded Cucumber Beetle Diabrotica balteata Western Spotted Cucumber Diabrotica undecimpunctata Beetle undecimpunctata______________________________________
Lepidopteran larvae which are combated by the process of the invention may include those listed in Table 5B.
TABLE 5B______________________________________Tobacco budworm Heliothis virescens Corn earworm Heliothis zea European corn borer Ostrinia nubilalis Cabbage looper Trichoplusia ni Diamondback moth Plutella xylostella Fall army worm Spodoptera frugiperda Beat army worm Spodoptera exigua______________________________________
The process of the invention may be used to protect a wide variety of plants prone to infestation by Coleoptera (Diabrotica, if the Bacillus thuringiensis strains are used) or Lepidoptera. Specific examples of commercially important plants to be protected by the invention are maize (corn), tomatoes, potatoes, cotton, tobacco and cucurbits.
Bacillus thuringiensis JHCC 4835 and 4353 are var. kurstaki strains according to tests with antibody to flagellar antigens. To date, var. kurstaki strains have been known only for their insecticidal effect on lepidopteran larvae. Surprisingly, these strains and indeed other kurstaki strains previously described by ICI (e.g. strain A20 deposited at the National Collections of Industrial and Marine Bacteria under accession number NCIB 12570 and the subject of our prior UK application no 8730132 filed Dec. 24 1987) are active against coleopteran larvae of the genus Diabrotica, in addition to their expected activity against Lepidoptera. Moreover if the 81 kD endotoxin gene is used as a hybridisation probe, strongly hybridising sequences can be found in both chromosomal and plasmid DNA samples from other known Bacillus thuringiensis strains. These strains include var. kurstaki strains such as HD1, HD73 and HD241, and the var. kenyae strain ED123. In spite of this, the 81 kD endotoxin gene of the present invention has not been previously described, or recognised as being present in these or other Bacillus thuringiensis strains.

BRIEF DESCRIPTION OF THE DRAWINGS
The invention may be further understood with reference to the accompanying drawings, in which:
FIG. 1 shows diagrammatically the derivation of the cloned 81 kD endotoxin gene in the recombinant plasmid pJH11;
FIG. 2 shows diagrammatically the structure of pJH11, and the structures of the coleopteran-specific tenebrionis -type gene and the CryA 6.6-type gene cloned into the same vector system (PT712) and designated pIC 226 and pIC 228 respectively;
FIG. 3 shows diagrammatically the structure of the cloned lepidopteran-specific endotoxin gene in the recombinant plasmid pJH12;
FIG. 4 shows diagrammatically the structure of the cloned lepidopteran-specific endotoxin gene in the recombinant lambda clone CL5;
FIGS. 5A-5U show the base sequence SEQ ID NO:1 the amino acid sequence SEQ ID NO:2, and the main restriction endonuclease recognition sites of the 81 kD endotoxin gene carried by pJH11;
FIG. 6 shows graphically the mean values of 12 separate bioassays testing the efficacy of recombinant E. coli strain MC1022/pIC244 against first-instar larvae of Western Corn Rootworm at 4 days after treatment;
FIG. 7 shows graphically the mean values of 12 separate bioassays testing the efficacy of recombinant E. coli strain MC1022/pIC244 against first-instar larvae of Western Corn Rootworm at 5 days after treatment.

DESCRIPTION OF THE INVENTION
With further reference to FIG. 1, in this diagram, which is not drawn to scale, N represents restriction endonuclease NdeI, H=HindIII, E=EcoR1, D=DraI and S=SmaI. Restriction sites above the maps are in the cloned DNA, whereas sites below the maps are in the vector. Parentheses indicate sites rendered non-functional by "filling-in" with Klenow DNA polymerase. Dashed lines represent pUC19 vector DNA. Dotted lines represent PT712 vector DNA in clone pJH11 and the arrowhead represents the bacteriophage T7 promoter. The star represents a .sup.32 P-labelled DNA fragment.
In FIG. 2, the figures below the maps represent the number of basepairs between the T7 RNA polymerase transcriptional start site and the beginning of the open reading frame. The large arrowhead represents the bacteriophage Y7 promoter. The solid block in PT712 represents the cloning site; H=HindIII and S=SmaI. Ap.sup.R indicates the gene encoding resistance to ampicillin.
In FIG. 3, the open box represents the cloned fragment which is about 7 kilobasepairs in length. The dashed lines indicate pUC19 vector DNA and Ap.sup.R is the gene encoding ampicillin resistance. The parentheses indicate an NdeI site which is only provisionally placed in the region shown; other restriction sites are represented by D=DraI, E=EcoR1, H=HindIII and N=NdeI.
With reference to FIG. 4, the only EcoR1 (E) sites shown are those at which the Lambda vector and the cloned insert fragment are joined. Open reading frames (ORFs) are shown by arrows above the map. The numbers above the map are the approximate fragment lengths of selected HindIII fragments. The ClaI (c) site shown is not the only ClaI site in the insert. The diagram is not drawn to scale; the cloned insert fragment is approximately 16 kilobase pairs in length.
FIGS. 5A-5U show the base sequence SEQ ID NO:1, the amino-acid sequence SEQ ID NO:2 and the main restriction sites of the gene encoding the 81 kD endotoxin protein and flanking DNA. The open reading frame begins at base number 355 and ends at base number 2514 with the G of the termination (Ter) codon TAG.
FIG. 6 is a graphical representation of the Western Corn Rootworm bioassay of cloned endotoxin gene products at 4 days after treatment (DAT). Points on the graph are mean values of percent mortality at a given rate.
FIG. 7 is a graphical representation of the Western Corn Rootworm bioassay of cloned endotoxin gene products at 5 days after treatment (DAT). Points on the graph are mean values of percent mortality at a given rate.
The following Examples illustrate the invention,
EXAMPLE 1
Isolation of the B. thuringiensis strain JHCC 4835 according to the invention.
Soil samples were diluted by placing 5.0 g of the sample into 45 ml of 0.5% peptone to give a 10.sup.-1 dilution prior to emulsification. The sample was then heated to 60.degree. C. for 10 minutes in a water bath. Sequential dilutions were then made prior to plating 0.1 ml of the 10.sup.-3 and 10.sup.-5 dilutions onto B. cereus selective agar plates (Bacillus cereus agar base, Oxoid) and esculin agar plates (in g/liter of H.sub.2 O: esculin 1.0; ferric citrate 0.5; peptone 10; NaCl 5; Oxoid agar 10). The plated samples were incubated at 30.degree. C. for 5 days. Slides were made of potential B. thuringiensis colonies, stained according to Smirnoff's procedure and examined microscopically at 100.times.magnification for the presence of stained, parasporal crystals.
Crystal-positive colonies were streaked onto L agar (10 g tryptone, 10 g yeast extract, 5 g NaCl, 10 g agar per liter) in order to ensure a pure culture, and incubated at 30.degree. C. Purified colonies were incubated overnight in L broth; after incubation an equal volume of 80% sterile glycerol was added prior to storage at -70.degree. C.
The strain JHCC 4353 was extracted by a similar procedure.
EXAMPLE 2
Propagation of the B. thuringiensis Strains JHCC 4835 and JHCC 4353 on solid media.
Inoculum was transferred from a glycerol storage vial onto an L agar plate to check for purity. A representative sweep of colonies was then used to inoculate 5 ml of broth (10 g tryptone, 10 g yeast extract, 5 g NaCl per liter) prior to incubation with shaking at 30.degree. C. for 3-5 hours. One milliliter of this culture was then used to inoculate a preparative (210 mm .times.210 mm) Petri plate containing 300 ml of CRL 1 medium agar (in g or ml/liter of water: nutrient broth 8; glucose 6; yeast extract 5; xylose 0.5; cotton seed flour extract 30 ml; corn steep liquor 3.2 ml; Mary Mendel's salt mixture 1 ml; Oxoid agar 15). Mary Mendel's salt mixture is:
______________________________________Mary Mendel's Salts______________________________________Distilled Water 495 ml HCl conc. 5 ml FeSO.sub.4 2.5 g MnSO.sub.4, H.sub.2 O or MnCl.sub.2.4H.sub.2 O 0.98 g ZnCl.sub.2 or ZnSO.sub.4.4.H.sub.2 O 1.76 g______________________________________
Cultures were incubated for 5 days at 30.degree. C. The cells, spores and crystals were then harvested by scraping confluent growth from the agar surface prior to freeze-drying.
EXAMPLE 3
Propagation of the B. thuringiensis strain JHCC 4835 and JHCC 4353 in liquid culture according to the invention.
Inoculum was transferred from a glycerol storage vial to a 250 ml Erylenmeyer flask containing 100 ml of CRL 1 medium (in g or ml/liter of water: nutrient broth 8; glucose 6; yeast extract 5; xylose 0.5; cotton seed flour extract 30 ml; corn steep liquor 3.2 ml; Mary Mendel's salt mixture 1 ml) and incubated with agitation at 30.degree. C. and 3400 rpm. After 24 hours, the entire 100 ml was used to inoculate 1 liter of the same medium in a 2L flask; this was incubated with agitation for 5 days at 30.degree. C. The cells, spores and crystals were then harvested by centrifugation and acetone precipitated using the Dulmage method.
EXAMPLE 4
Formulation according to the invention.
Upon completion of the fermentation cycle, JHCC 4353 or JHCC 4835 bacteria can be harvested by first separating the B. thuringiensis spores and crystals from the fermentation broth as described in Example 2. The recovered spores and crystals can be resuspended in 100 ml of water and formulated into a liquid concentrate by adding 4.9 g of Morwet D-425 (dispersing agent), 4.9 g of Veegum HV (suspending agent), 4.9 ml of Tween 80 (wetting agent) and 24.4 ml of Sorbo (anti-freezing agent). Each ingredient is added separately in order stated above. The product is kept at 40.degree. C. prior to use.
EXAMPLE 5
Cloning of plasmid-derived endotoxin genes from B. thuringiensis strain 4835.
Endotoxin genes are cloned from covalently closed circular (ccc) plasmid DNA prepared from B. thuringiensis strain 4835 as follows:
A 500 ml culture of strain 4835 is grown in L broth at 37.degree. C., with shaking, to an absorbance value at 600 mm of 1.00 optical density (O.D) units. Cells are harvested by centrifugation at 8000 revolutions per minute (rpm) for 10 minutes at 4.degree. C., then re-suspended in 5 ml TE buffer (50 mM Tris HCl pH7.6, 20 mM EDTA). The resuspended cells are added to 95 ml TE buffer containing 1% sodium dodecyl sulphate (SDS) and 0.085M NaOH, pH2.4 lysin of the cell suspension occurs during a incubation at room temperature. 10 ml of 10% SDS are then added to the lysate; the solution is mixed gently prior to the gradual addition of 10 ml 2M Tris HCl pH7.0 with gentle mixing. 34 ml of 5M NaCl is added and the solution is mixed well prior to overnight incubation on ice-water. The lysate is centrifuged at 9000 rpm for 15 minutes at 4.degree. C. and the supernatant carefully transferred to a new centrifuged bottle prior to the addition of 36 ml 50% polyethylene glycol (PEG) 600 in TE buffer. The lysate is incubated on ice-water for 3 hours (minimum) to overnight prior to centrifugation at 10,000 rpm for 10 minutes at 40.degree. C. The pellet is dissolved in 9 ml TE buffer and 100 .mu.l 5 mg/ml RNA (treated at 100.degree. C. for 5 minutes, prior to use) and incubated at 45.degree. C. for 10 minutes, prior to the addition of 9.23 g caesium chloride (CsCl). After the CsCl is dissolved, 0.9 ml of 5 mg/ml ethidium bromide is added prior to isopycnic centrifugation of the mixture at 40,000 rpm for 48 hours at 15.degree. C., and isolation of the ccc DNA band. After removal of the CsCl and ethidium bromide by conventional techniques, high molecular weight plasmid ccc DNA (greater than 40 kilobase pairs) is isolated by size fractionation on 10%-40% sucrose step gradients prior to digestion with appropriate restriction endonucleases (ie, those which do not cleave the DNA in the endotoxin structural gene), ligation into appropriately digested plasmid cloning vectors (eg, pUC18 or pUC19), and transformation into an appropriate E. coli host strain (the specific strain used is MC1022, which is an ampicillin-sensitive strain of the genotype ara D139, .DELTA.(ara, leu) 7697, .DELTA.(lac Z) M15, gal U, gal K, str A. Transformants resistant to appropriate antibiotics which select for the introduced plasmid vector were then screened for recombinant endotoxin genes by standard DNA hybridization methods, using as probes the cloned tenebrionis gene (plus flanking sequences) and a cloned CryIA gene.
EXAMPLE 6
Cloning of chromosomal endotoxin genes from B. thuringiensis strain 4835.
Endotoxin genes were cloned from chromosomal DNA prepared from strain 4835 as follows:
A 500 ml culture of strain 4835 was grown in L-broth at 37.degree. C., with shaking, to an Absorbance value at 600 nm of 1.00 optical density units. Cells were harvested by centrifugation at 8000 rounds per minute (rpm) for 10 minutes at 4.degree. C., then re-suspended in 5 ml TES buffer (50 mM Tris-HCl pH7.5, 50 mM NaCl, 5 mM EDTA). Cells were treated for 30 minutes at 37.degree. C. with lysozyme (0.5 mg/ml final concentration) and RNase (0.1 mg/ml final concentration taken from a stock solution of 5 mg/ml boiled at 100.degree. C. for 5 minutes prior to use). Lysis was completed by the addition of Sarcosyl to give a final concentration of 0.8% and incubation at 37.degree. C. for 60 minutes in the presence of Pronase (0.5 mg/ml final concentration taken from a stock solution of 5 mg/ml pre-incubated at 37.degree. C. for 60 minutes prior to use). Lysate volume was adjusted to 9.0 ml in the 50 mM Tris-HCl pH 7.6, 10 mM EDTA, prior to the addition of 9.2 g caesium chloride (CsCl). After the CsCl dissolved, 1.25 ml of a 5 mg/ml solution of ethidium bromide was added prior to isopyonic centrifugation of the mixture at 40,000 rpm for 48 hours at 15.degree. C.
After removal of CsCl and ethidium bromide by conventional techniques, an aliquot of purified chromosomal DNA was partially digested with the restriction endonuclease EcoR1 prior to ligation into EcoR1-digested bacteriophage .lambda. EMBL4 vector DNA. Ligation reaction mixtures were packaged into viable phage particles using a commercially-available kit from Amersham international PLC.
The resultant recombinant phase particles were selected by growth on E. coli host strain PE392, a P2 lysogen of strain LE392 which has the genotype hsd R514 (r.sub.K.sup.-,M.sub.K.sup.+) sup E44, sup F58, lacYl or .DELTA.(lac2Y), gal K2, gal T22, met B1, trp R55. Recombinant phage carrying one or more endotoxin genes were detected by hybridisation of lysed plaques fixed to a duplicate set of nitrocellulose filters using as probes radiolabelled fragments of a CryIA-endotoxin gene and a 3'-terminal fragment of the gene for the 81 kD protein.
Plaques containing endotoxin genes were purified and characterised by restriction endonuclease mapping techniques well known in the art.
Chromosomal endotoxin genes can also be cloned directly into plasmid vectors (e.g. pUC19). This may necessitate cloning the gene in small fragments by the technique well known in the art as "chromosome walking". Problems with deletion events due to host-mediated homologous recombination can be circumvented by cloning in this manner and reconstructing the desired open reading frame by piecing the gene together after sequencing an appropriate number of overlapping gene fragments.
EXAMPLE 7
Solid media propagation of insecticidally-active E. coli strains carrying cloned endotoxin genes according to the invention.
Inoculum was transferred from a glycerol storage vial to L agar Petri plates containing antibiotics suitable for selection of the cloning vector. Inoculated plates were incubated 24-72 hours to allow for the appearance of characteristic colonial morphology. A selection of single colonies of the correct appearance (e.g. rough colonies in the case of E. coli strain BL21/pJH11 carrying the cloned the 81 kD endotoxin gene) was used to inoculate a small volume of L broth [15 g Tryptone, 7.5 g yeast extract, 7.5 g NaCl per 1500 ml total volume] containing an antibiotic (e.g. ampicillin) suitable for selection for the plasmid vector carrying the cloned endotoxin gene. Cultures were grown to an an Absorbance value at 600nm of 0.5-0.7 O.D. units. One milliliter (ml) of culture was used to inoculate, by spreading with a glass "spreader", a preparative (i.e. 245 mm.times.245 mm.times.20 mm) Petri plate containing L agar [L broth as above supplemented with 16 g Oxoid agar, an appropriate antibiotic and IPTG to a final concentration of 120 microgram/ml.]. Preparative plates were incubated overnight at 37.degree. C. Bacterial growth was scraped from the preparative plates using a glass spreader. The scraped product, pooled from several plates if necessary, was transferred to a sterile plastic container and frozen for 2 hours at -20.degree. C. prior to lyophilisation for 16-18 hours. The material was stored at -20.degree. C. The dried product is crushed into an even powder prior to use as an insecticidal material in insect bioassays.
EXAMPLE 8
Purification of the novel 81.2 kilodalton endotoxin protein from the recombinant E. coli strain MC1022/pJH11. E. coli strain MC1022/pJH11 was prepared on solid media as described in Example 7, but the scraped cell mass was stored at -20.degree. C. without lyophilisation. Frozen cells were thawed on ice prior to disruption by sonication at an amplitude of 14 microns for 9.times.20 seconds using a 1 cm diameter probe. The sonicated cells were then centrifuged at 9300.times.g at 4.degree. C. to remove unbroken cells, prior to high-speed centrifugation (100,000.times.g for 60 minutes at 4.degree. C.) to remove membranes. The high-speed extract was then subjected to ion-exchange chromatography over DEAE-Sepharose at pH 8.0. The column was then eluted with a 0-500 mM NaCl gradient, and fractions monitored by SDS-PAGE. Fractions containing the 81.2 kD protein were pooled, dialysed against 10 mM Tris pH8.0, and subjected to a second FPLC ion-exchange chromatography step, again eluting the bound proteins with a 0-500 mM NaCl gradient. Fractions containing the partially-purified 81.2 kD protein were identified and pooled prior to further purification by gel filtration chromatography. This process results in an endotoxin protein which is 90% pure and which may be used (with or without a concentration step) in insect bioassays.
Examples 9 and 10 illustrate the activity of the novel B. thuringiensis strains of the invention against different Diabrotica spp.
EXAMPLE 9
Efficacy of larvacidal activity of B. thuringiensis strain JHCC 4835 against Western Corn Rootworm (Diabrotica virgifera virgifera).
For each B. thuringiensis strain, a mixture of spores and crystals was prepared by incubating the organism at 30.degree. C. for 5 days on 210 mm.times.210 mm Petri plates as in Example 2, scraping confluent growth from the agar surface and freeze drying. For tests on first instar larvae of Western Corn Rootworm (Diabrotica virgifera virgifera), freeze dried spores and crystals were mixed sterile water and a sterile sucrose solution to give the treatment rates indicated in Table 7 in parts per million (ppm) and a final sucrose concentration of 2.5%. The solubilised spore crystal (treatment) mixture was homogeneously dispersed by sonication in a water bath sonicator for 5 minutes. The treatment was then vortexed and applied as 0.075 ml of solution to a disk 1.5 cm in diameter cut from "Teri towels" (Kimberly Clark product #34770). One test consisted of 5 Teri towel disks with applied treatment, each placed in a separate plastic Falcon test dish prior to infestation with 5 first instar larvae per dish. Tests were placed in a closed styrofoam box with a moistened Teri towel as a humidity source; the box was incubated in a room held at 78.degree. F.-80.degree. F. for 3 or more days after treatment (DAT) prior to evaluation of the bioassay. The conditions inside the styrofoam box were 74.degree. F.-76.degree. F. and 80% relative humidity. Tests were evaluated using a dissecting microscope. The efficacy of these treatments at various concentrations (rates) is shown in Table 6.
EXAMPLE 10
Efficacy of larvacidal activity of B. thuringiensis strain JHCC 4835 against Southern Corn Rootworm (Diabrotica undecimpunctata howardi).
For each B. thuringiensis strain, a mixture of spores and crystals was prepared by incubating the organism at 30.degree. C. for 5 days on 210 mm.times.210 mm Petri plates as in Example 2, scraping confluent growth from the agar surface and freeze drying. Tests on first instar Southern Corn Rootworm (Diabrotica undecimpunctata howardi) were set up, incubated and evaluated as described in Example 9. The efficacy of these treatments at various concentrations (rates) is shown in Table 8.
EXAMPLE 11
Specificity of insecticidal activity of B. thuringiensis strains JHCC 4835 and JHCC 4353.
A mixture of spores and crystals was prepared by incubating the organism at 30.degree. C. for 5 days on 210 mm.times.210 mm Petrie plates as in Example 2, scraping confluent growth from the agar surface and freeze-drying. Freeze-dried spores and crystals were mixed with a sterile 2.5% sucrose solution for tests on first-instar Southern Corn Rootworm (Diabrotica undecimpunctata howardi) larvae. Freeze-dried spores and crystals were mixed with sterile H.sub.2 O and presented on potato leaves dipped in this suspension for tests on first-instar Colorado potato beetle (Leptinotarsa decemlineata) larvae. Freeze-dried spores and crystals were mixed with sterile H.sub.2 O and presented on cotton cotyledons dipped in this suspension for tests on Boll Weevil (Anthonomus grandis) adults. The efficacy of these preparations at various concentrations in parts per million (ppm) is shown in Table 8. Comparison of the activity spectrum B. thuringiensis variety tenebrionis (DSM 2803) with those of strains JHCC 4835 and JHCC 4353 shows the more selective effect of the latter two strains (Table 8).
The efficacy of B. thuringiensis strain JHCC 4835 in the control of various lepidopteran larvae is illustrated in Examples 12-15.
EXAMPLE 12
Efficacy of B. thuringiensis strain JHCC 4835 in the control of various lepidopteran larvae.
A mixture of spores and crystals was prepared as in Example 2, and mixed with an appropriate conventional artificial insect diet. Results are shown in Table 9 below. Comparison of the efficacy of B. thuringiensis variety tenebrionis (DSM 2803) with that of strain JHCC 4835 shows that only strain 4835, and the known var. kurstaki strain JHCC 4360, are insecticidal to lepidopteran larvae (Table 9).
EXAMPLE 13
Efficacy of B. thuringiensis strain JHCC 4835 in the control of Fall Army Worm (Spodoptera frugiperda).
A mixture of spores and crystals was prepared as in Example 2, and mixed with an appropriate conventional artificial insect diet. Results are shown in Table 10 below. Comparison of the efficacy of B. thuringiensis strain JHCC 4580 (an isolate very similar to var. tenebrionis) with that of strain JHCC 4835 shows that only strain 4835and the known kurstaki strain JHCC 4360, are insecticidal to S. frugiperda (Table 10).
EXAMPLE 14
Efficacy of B. thuringiensis strain JHCC 4835 in the control of Beet Army Worm (Spodoptera exigua).
A mixture of spores and crystals was prepared as in Example 2, and mixed with an appropriate conventional artificial insect diet. Comparison of the efficacy of B. thuringiensis strain JHCC 4580 (an isolate very similar to var. tenebrionis with that of strain JHCC 4835 shows that only strain 4835, and the known kurstaki strain JHCC 4360, are insecticidal to S. exigua.
EXAMPLE 15
Efficacy of Bacillus thuringiensis strains JHCC 4835 and 4353 in the control of Heliothis viriscens.
A mixture of spores and crystals was prepared as in Example 2, and mixed with an appropriate conventional artificial insect diet. Control of larvae obtained is shown in Table 12 below.
The efficacy and novel larvacidal activity spectrum of recombinant E. coli calls carrying the cloned endotoxin gene encoding the 81.2 kD protein are illustrated in Examples 16-18.
EXAMPLE 16
Efficacy of the larvacidal activity of the 81 kD endotoxin expressed by recombinant E. coli strain MC1022/pJH11 in controlling European Corn Borer (Ostrinia nubilalis).
E. coli strain MC1022/pJH11 was prepared on solid media as described in Example 7. Freeze-dried cells were thawed and mixed with an appropriate conventional artificial insect diet to give the final treatment concentration in parts per million (ppm) shown in Table 13. Tests were infested with first instar European corn borer larvae and evaluated at 6 days after treatment (DAT). E. coli strains carrying the recombinant plasmid with the 81 kD endotoxin gene (pJH11) and those carrying the CryIA 6.6 type lepidopteran- specific gene (pIC228) were insecticidal, whereas those carrying the vector only (PT712) or the tenebrionis -type gene (pIC226) were not.
EXAMPLE 17
Efficacy of the larvacidal activity of the 81 kD endotoxin expressed by recombinant E. coli strain MC1022/pJH11 in controlling Colorado Potato Beetle (Leptinotarsa decemlineata).
E. coli strain MC1022/pJH11 was prepared on solid media a described in Example 7. Freeze-dried cells were thawed, mixed with sterile H.sub.2 O and presented on potato leaves dipped in this suspension for tests on first-instar larvae of Colorado Potato Beetles (Leptinotarsa decemlineata) to give the final treatment concentration in parts per million (ppm) shown in Table 14. E. coli strains carrying the recombinant plasmid with the 81 kD endotoxin gene (pJH11) and those carrying the tenebrionis -type gene (pIC226) were insecticidal whereas those carrying the vector only (PT712) or the CryIA 6.6 type lepidopteran-specific gene (pIC228) were not.
EXAMPLE 18
Efficacy of the larvacidal activity of the 81 kD endotoxin expressed by recombinant E. coli strain MC1022/pJH11 in controlling Western Corn Rootworms (Diabrotica virgifera virgifera).
E. coli strain MC1022/pJH11 was prepared on solid media as described in Example 7. For tests on first instar larvae of Western Corn Rootworm (Diabrotica virgifera virgifera), freeze dried cells were thawed, mixed with sterile water and a sterile sucrose solution to give the treatment rates indicated and a final sucrose concentration of 2.5%. The solubilised cell (treatment) mixture was homogeneously dispersed by sonication in a water bath sonicator for 5 minutes. The treatment was then vortexed and applied as 0.075 ml of solution to a disk 1.5 cm in diameter cut from "Teri towels" (Kimberly Clark product #34770) as described in Example 9 to give the final treatment concentration in parts per million (ppm) shown in Tables 15 & 16. These tests were read at 4 and 5 DAT and the results were subjected to statistical analysis. Results are presented graphically in FIGS. 6 & 7 and indicate that E. coli strains carrying the recombinant plasmid with the the 81 kD endotoxin gene (pJH11) and those carrying the tenebrionis -type gene (pIC226) were insecticidal whereas those carrying the vector only (PT712) or the CryIA 6.6 type lepidopteran-specific gene (pIC228) were not; the differences in activity between these two groups of strains (pJH11 and pIC226 versus the vector PT712 and pIC228) are statistically significant.
The efficacy and novel larvacidal activity spectrum of the partially-purified and purified novel 81.2 kD endotoxin protein are illustrated in Examples 19-21.
EXAMPLE 19
Efficacy of the larvacidal activity of the partially-purified and purified 81 kD endotoxin in controlling European Corn Borer (Ostrinia nubilalis).
Partially-purified and purified 81 kD endotoxin protein was prepared from freeze-dried recombinant E. coli cells MC1022/pJH11 as described in Example 8. Fractions from the second FPLC ion-exchange column were designated MonoQ A, B, and C and contained about 50%, 50%, and 25% 81.2 kD endotoxin protein respectively. These fractions were added to conventional artificial insect diet to give the treatment rates in ppm shown in Table 17 in bioassays to test insecticidal activity on first-instar larvae of European corn borer (Ostrinia nubilalis). The results in Table 19 show that all fractions were active in producing either mortality or stunting of larval growth. Purified 81.2 kD protein was also tested and found to be insecticidal to European corn borer larvae and to stunt larval growth (Table 18).
EXAMPLE 20
Efficacy of the larvacidal activity of the partially-purified and purified 81 kD endotoxin in controlling Colorado Potato Beetle (Leptinotarsa decemlineata).
Partially-purified and purified 81.2 kD endotoxin protein was prepared from freeze-dried recombinant E. coli cells MC1022//pJH11 as described in Example 8. Fractions from the second, FPLC ion-exchange column were designated MonoQ A, B, and C and contained about 50%, 50%, and 25% 81.2 kD endotoxin protein respectively. These fractions and the purified 81.2 kD protein were mixed with sterile H.sub.2 O and presented on potato leaves dipped in this suspension for tests on first-instar larvae of Colorado Potato Beetles (Leptinotarsa decemlineata) to give the final treatment concentration in parts per million (ppm) shown in Table 19. The results in Table 19 show that all fractions were insecticidal to Colorado Potato Beetle larvae.
EXAMPLE 21
Efficacy of the larvacidal activity of the partially-purified and purified 81 kD endotoxin in controlling Western Corn Rootworms (Diabrotica virgifera virgifera).
Partially-purified and purified 81 kD novel endotoxin protein was prepared from freeze-dried recombinant E. coli cells MC1022/pJH11 as described in Example 8. Fractions from the second, FPLC ion-exchange column were designated MonoQ A, B, and C and contained about 50%, 50%, and 25% 81.2 kD endotoxin protein respectively. These fractions and the purified 81.2 kD protein were mixed with sterile water and a sterile sucrose solution to give the treatment rates indicated in Table 20, and a final sucrose concentration of 2.5%. Tests on first-instar larvae of Western Corn Rootworm were carried out as described in Example 18. The results in Table n indicate that the 81.2 kD endotoxin is insecticidal to Western Corn Rootworm larvae.
The following microorganisms and clones referred to in this specification have been deposited at the National Collections of industrial and Marine Bacteria, 23 St. Machar Drive, Aberdeen AB2 1RY, Scotland:
______________________________________Name Deposit Number Date______________________________________Bacillus thuringiensis A20 12570 20 October 1987 JHCC 4835 40091 7 December 1988 JHCC 4353 40090 7 December 1988 E. coli BL21/pJH11 40275 6 April 1990 MC1022/pJH12 40278 24 April 1990 Bacteriophage Lambda 40279 26 April 1990 EMBL4 clone CL5 twr/se 01-May-1990______________________________________
TABLE 1__________________________________________________________________________MORPHOLOGY Colony Morphology (Cultured on Strain Crystals Cell Morphology Bacillus Cereus selective Agar)__________________________________________________________________________HD-1 Medium Rods with terminal Large colonies, yellow centres. Egg bipyramids plus spores which do yolk lecithinase: NEGATIVE undefined shaped not distend the crystals cell DMS 2803 Small irregular Rods with terminal Large Colonies, blue centres. Egg crystals; few spores with do not yolk lecithinase: NEGATIVE bipyrimidal distend the cell crystals JHCC 4353 Large, mainly Rods with oval, Large blue colonies with yellow regular terminal or centres. Egg yolk lecithinase: bipyrimidal subterminal spores POSITIVE crystals which do not distend the cell JHCC 4835 Large, mainly Rods with oval, Large blue colonies with yellow regular terminal or centres. Egg yolk lecithinase: bipyrimdal subterminal spores POSITIVE crystals which do not distend the cell__________________________________________________________________________
TABLE 2______________________________________Biochemical Markers on Microtitre Plate DSM JHCC JHCC Reagent HD-1 2803 4353 4835______________________________________Glycerol - - - - Erythritol - - - - D-arabinose - - - - L-arabinose - - - - Ribose + +/- + + D-xylose - - - - L-xylose - - - - Adonitol - - - - .beta.-methyl-xyloside - - - - Galactose - - - - D-glucose + + + + D-fructose + + + + D-mannose - + - - L-sorbose - - - - Rhamnose - - - - Dulcitol - - - - Inositol - - - - Mannitol - - - - Sorbitol - - - - .alpha.-methyl-D-mannoside - - - - .alpha.-methyl-D-glucoside - - - - N acetyl glucosamine + + + + Amygdaline - - - - Arbutine + + + + Esculine + +/- + + Salicine + - + + Cellobiose + - + + Maltose + + + + Lactose - - - - Melibiose - - - - Saccharose - + - - Trehalose + + + + Inuline - - - - Melezitose - - - - D-raffinose - - - - Amidon + + + + Glycogene + + + + Xylitol - - - - .beta.-gentiobiose - - - - D-turanose - - - - D-lyxose - - - - D-tagatose - - - - D-fucose - - - - L-fucose - - - - D-arabitol - - - - L-arabitol - - - - Gluconate - - - - 2-ceto-glyconate - - - - 5-ceto-gluconate - - - - Ortho-nitro-phenyl - - - - galactoside (ONPG) Arginine (ADC- + + + + arginine dihydrolase) Lysine (LDH-lysine + - - - Decarboxylase) Sodium Citrate - + + + (citrate utilisation) Sodium Thiosulphate - - - - (H.sub.2 S production) Urea (urease) + - + + Tryptophane - - - - (deaminase detection) Tryptophane (indole - - - - production) Sodium Pyruvate (VP) + + + + Gelatine (Gelatinase) + + + + NO.sub.3 --NO.sub.2 Reduction + - + + Ornithine - - - - decarboxylase (ODC)______________________________________ + = Positive Reaction - = Negative Reaction +/- = Weak Reaction
TABLE 3______________________________________Biochemical Markers on ID-IDENT Plates DSM JHCC JHCC Reagent HD-1 2803 4353 4835______________________________________2-naphthyl-phosphate - - - - 2-naphthyl-butyrate + + + + 2-naphthyl-caprylate + + + + 2-naphthyl-myristate + + + + L-leucyl-2- + + + + naphthylamide L-valyl-2- + + + + naphthylamide L-crystyl-2- + + + + naphthylamide N-benzoyl-DL-arginine- 0 + + + 2-naphthylamide N-glutaryl- 0 + + + phenylalanine-2- naphthylamine 2-naphthyl-phosphate + + + + naphthol-AS-B1- + + + + phosphate 6-bromo-2-naphthyl-.alpha.D- - - - - galactopyranoside 2-naphthyl-.beta.D- - - - - galactopyranoside Naphtol-AS-B1-.beta.D - - - - glucuronide 2-naphthyl-.alpha.D- + + + + glucopyranoside 6-bromo-2-naphthyl-.beta.D- + - + + glucopyranoside 1-naphthyl-N-acetyl-.beta.D- - - - - glucosaminide 6-Bromo-2-naphthyl-.alpha.D- - - - - mannopyranoside 2-naphthyl-.alpha.L- - - - - fucopyranoside______________________________________ ID-DENT is a Trade Mark of API Analytab Products
TABLE 4__________________________________________________________________________SENSITIVITIES TO ANTIBIOTlCSSTRAIN C CT F SF NA ANP S TET OA K VA RIF LI CN CR CAR E__________________________________________________________________________HD-1 S R S S S R S S S S S S S S S S S DSM 2803 S R S R S R S S S R S S/R S S S R S JHCC 4353 S R S S S R S S S S S S S S S R S JHCC 4835 S R S S S R S S S S S S S S S R S__________________________________________________________________________ S = SENSITIVE R = RESISTANT S/R = REDUCED SENSITIVITY C = Chloramphenicol 50 ug/ml F = Nitrofuration 200 ug/ml NA = Naladixic Acid 30 ug/ml S = Streptomycin 25 ug/ml TET = Tetracycline 50 ug/ml VA = Vancomycin 30 ug/ml OA = Oxolinic Acid 2 ug/ml CN = Gentamicin 10 ug/ml E = Erythromycin 10 ug/ml CT = Colistin Sulphate 10 ug/ml SF = Sulphfurazole 500 ug/ml AMP = Ampicillin 25 ug/ul CR = Cephaloridine 25 ug/ml K = Kanamycin 30 ug/ml RIF = Rifampicin 2 ug/ml LI = Lincomycin 15 ug/ml CAR = Carbenicillin 100 ug/ml
TABLE 6______________________________________ % Mortality SCRW 6 CPB BW Strain ppm 3 DAT DAT ppm 3 DAT ppm 3 DAT______________________________________DSM 2803 4800 8 92 200 100 1200 87 JHCC 4835 4800 38 92 200 7 1200 13 JHCC 4353 4800 12 68 200 0 1200 13 UNTREATED -- 0 4 - 0 - 20 CONTROL______________________________________ ppm = Parts per million $CRW = Southern Corn Rootworm CPB = Colorado Potato Beetle BW = Boll Weevil (RF) = % Reduction Feeding
TABLE 7______________________________________ Diabrotica virgifera virgifera % Mortality at 3 days after treatmentExpt No B. thuringiensis Test Larvae* Untreated Controls*______________________________________1 4835 88 4 4353 72 16 2 4835 50 4 4353 60 8______________________________________ *25 firstinstar larvae per test group
TABLE 8______________________________________Southern Corn Colorado Potato Rootworm Boll Weevil Beetle3 DAT 6 DAT 3 DAT 3 DATBt Strain 4800 ppm 1200 ppm 200 ppm______________________________________DSM 2803 8 92 87 100 tenebrionis 4835 38 92 13 7 4353 12 68 13 0 Control 0 4 20 0______________________________________ RESULTS = % MORTALITY DAT = DAYS AFTER TREATMENT
TABLE 9______________________________________ Rate Bt Strain (ppm) H.zea T.ni P.xylostella______________________________________4360 5 85 95 100 kurstaki 4835 25 100 100 100 250 100 -- -- 4580 25 0 0 0 tenebrionis type 250 5 -- -- Control -- 0 0 10______________________________________ RESULTS = % MORTALITY AT 4 DAYS AFTER TREATMENT
TABLE 10______________________________________Bt SRAINS VERSUS Spodoptera Frugiperda AT 6 DAYS AFTER TREATMENT 4580 4360 tenebrionis 4835 kurstaki Control______________________________________PREP 1 0 92 84 3 PREP 2 0 60 80 3 PREP 3 0 92 88 3 PREP 4 8 100 100 3______________________________________ RESULTS EXPRESSED AS % MORTALITY AT 80 PARTS PER MILLION
TABLE 12______________________________________B.t. STRAINS VERSUS Heliothis viriscens AT 6 DAYS AFTER TREATMENT 4580 4360 tenebrionis 4835 kurstaki 1 2 1 2 1 2______________________________________PREP 1 4 8 100 96 100 100 PREP 2 4 0 60 34 96 100 PREP 3 9 0 100 100 100 100 PREP 4 0 4 100 100 100 100______________________________________ CONTROL 1 = 3.5% CONTROL 2 = 2% RESULTS EXPRESSED AS % MORTALITY AT 80 PARTS PER MILLION
TABLE 13______________________________________EUROPEAN CORN BORER BIOASSAYS 1ST Experiments Prep NumberRate/% R.S. 1 2 5 6 7 8______________________________________plC228 500 ppm 30 30 63 5 10 75 % R.S. 100 100 100 100 100 100 pJH11 500 ppm 15 75 85 72 85 80 % R.S. 100 100 100 100 100 100 plC226 500 ppm 0 0 10 s 0 10 % R.S. 0 0 11 6 0 0 PT712 500 ppm 0 0 10 0 0 0 % R.S. 0 0 17 5 0 0 Control 0 0 8 3 0 8 % R.S. 0 3 11 0 0 3 4835F2 10 ppm -- -- 100 90 80 109 % R.S. -- -- xxx 100 100 xxx______________________________________ RESULTS = % MORTALITY AT 6 DAT % R.S. = % SURVIVORS OF REDUCED SIZE
TABLE 14______________________________________COLORADO POTATO BEETLE BIOASSAYS PREP NUMBERSAMPLE RATE 1 2 5 6 7 8______________________________________plC226 5000 ppm 84 84 60 53 27 93 pJH11 5000 ppm 84 100 60 93 79 87 PT712 5000 ppm 0 17 7 14 7 14 plC228 5000 ppm 0 4 13 7 0 23 Control -- 0 0 7 7 0 13 4580F2 40 ppm -- -- 100 93 100 73______________________________________ RESULTS = % MORTALITY AT 3 DAYS AFTER TREATMENT
TABLE 15______________________________________WESTERN CORN ROOTWORM BIOASSAY E.coli Rate Prep-ExperimentRecombinant Plasmid (ppm) 5-1 5-2 6-1 6-2 7-1 7-2 8-1 8-2______________________________________pIC226 4500 75 60 37 59 36 58 42 68 (tenebrionis-type gene) 3750 36 40 36 56 40 28 64 64 3000 20 12 20 36 21 27 68 12 1250 -- 28 12 16 20 48 20 19 pJH11 4500 16 52 60 56 36 44 64 58 (novel gene) 3750 28 36 42 13 46 40 68 48 3000 08 12 36 46 52 44 36 29 1250 -- 12 20 04 40 0 16 28 pIC228 4500 16 36 36 04 32 36 21 32 (Cry IA lepidopteran- 3750 20 24 17 13 20 40 12 27 specific gene) 3000 0 08 08 20 20 40 08 38 1250 -- 08 11 24 20 24 0 17 PT712 4500 18 24 40 24 52 14 42 64 (vector only) 3750 08 28 36 40 32 24 12 28 3000 12 36 12 32 36 28 48 28 1250 -- 12 12 16 24 04 20 16______________________________________ RESULTS = % MORTALITY AT 4 DAYS AFTER TREATMENT
TABLE 16______________________________________WESTERN CORN ROOTWORM BIOASSAY E.coli Rate Prep-ExperimentRecombinant Plasmid (ppm) 5-1 5-2 6-1 6-2 7-1 7-2 8-1 8-2______________________________________pIC226 4500 75 60 37 59 36 58 42 68 (tenebrionis-type gene) 3750 36 40 36 56 40 28 64 64 3000 68 44 56 40 36 48 100 44 1250 -- 28 20 28 44 56 37 29 pJH11 4500 56 56 88 68 68 76 84 67 (novel gene) 3750 52 72 92 28 73 88 92 75 3000 12 40 79 56 77 64 60 68 1250 -- 32 24 20 52 04 32 24 pIC228 4500 27 60 64 44 64 54 54 54 (Cry IA lepidopteran- 3750 32 40 25 52 32 48 29 50 specific gene) 3000 04 44 36 60 44 44 07 12 1250 -- 24 15 40 20 40 07 29 PT712 4500 40 36 76 40 68 68 79 96 (vector only) 3750 40 56 60 44 56 52 30 72 3000 24 52 40 40 42 36 64 56 1250 -- 20 13 32 36 13 41 24______________________________________ RESULTS = MORTALITY AT 5 DAYS AFTER TREATMENT
TABLE 17______________________________________EUROPEAN CORN BORER BIOASSAY AT 6 DAYS TREATMENT NON-TREAT- (% MORTALITY/ MENT AVE. SIZE IN mm) B.t. Rate CONTROLS MonoQ Fractions Strain(ppm) Prep Pre Post A B C 4835______________________________________115 1 -- -- 88/1.5 98 2 56/1.75 67 1 66/1.5 65 2 67/1.8 65 3 78/1.5 62 1 100/1.1 57 2 71/2.0 42 2 89/1.5 11.5 3 78/1.75 10 2 62/1.8 6.5 2 17/2.7 6.5 3 22/3.1 6.3 1 22/2.7 6.0 2 20/2.5 4 2 0/2.4 3.8 1 11/5.4 3 1 0/5.0 -- 1 0/8.5 0/10 -- 2 11/6.2 0/6.0 -- 3 0/9.5 13/9.1______________________________________ AVE SIZE IN mm = Average Size Of Surviving Larvae
TABLE 18______________________________________81kD PROTEIN VS. EUROPEAN CORN BORER IA JH % % Ave. Rate Mortality Mortality Size______________________________________PREP 1 81kD Prot 83 ppm -- 0 2.7 mm 17/20 Ctrl 5 ppm -- 0 9.5 mm Tris Ctrl -- -- 0 10 mm PREP 2 81kD Prot 16 ppm 100 -- -- 9.5 ppm -- 25 2.1 mm 17/20 Ctrl 5 ppm -- 0 6 mm Tril Ctrl -- 40 0 6 mm______________________________________ IA = IOWA, JH = JEALOTT'S HILL, CTRL = CONTROL AVE SIZE = AVERAGE SIZE OF SURVIVING LARVAE
TABLE 19______________________________________81kD PROTEIN VERSUS COLORADO POTATO BEETLE Mono Q Fractions B.t. StrainControl A B C 81kD 4580______________________________________PREP 1 Rate (ppm): -- 330 213 270 -- 40 0 47 21 47 -- 80 PREP 2 Rate (ppm): -- 466 366 342 148 40 0 87 67 87 33 100 PREP 3 Rate (ppm): -- -- -- 588 257 40 0 -- -- 60 73 80______________________________________ Results = % Mortality at 3 Days After Treatment
TABLE 20______________________________________B1 kD PROTEIN VERSUS WESTERN CORN ROOTWORM % Mortality at;Sample Rate 3 DAT 4 DAT______________________________________81kD Protein 900 ppm 98 100 Tris Control -- 0 0 Control (2) -- 0 0______________________________________ DAT = DAYS AFTER TREATMENT
__________________________________________________________________________# SEQUENCE LISTING - - - - (1) GENERAL INFORMATION: - - (iii) NUMBER OF SEQUENCES: 2 - - - - (2) INFORMATION FOR SEQ ID NO:1: - - (i) SEQUENCE CHARACTERISTICS: (A) LENGTH: 2965 base - #pairs (B) TYPE: nucleic acid (C) STRANDEDNESS: both (D) TOPOLOGY: linear - - (xi) SEQUENCE DESCRIPTION: SEQ ID NO:1: - - CATATGTATA GAGCAACTTA ATCAAGCAGA GATATTTTCA CCTATCGATG AA -#AATATCTC 60 - - TGCTTTTTCT TTTTTTATTT GGTATATGCT TTACTTGTAA TCGAAAATAA AG -#CACTAATA 120 - - AGAGTATTTA TAGGTGTTTG AAGTTATTTC AGTTCATTTT TAAAGAAGGT TT -#AAAGACGT 180 - - TAGAAAGTTA TTAAGGAATA ATATTTATTA GTAAATTCCA CATATATTAT AT -#AATTAATT 240 - - ATGAAATATA TGTATAAATT GAAAATGCTT TATTTGACAT TACAGCTAAG TA -#TAATTTTG 300 - - TATGAATAAA ATTATATCTG AAAATTAAAT AATAGTATAA GTGGAGGGAT TA -#ATATGAAA 360 - - CTAAAGAATC AAGATAAGCA TCAAAGTTTT TCTAGCAATG CGAAAGTAGA TA -#AAATCTCT 420 - - ACGGATTCAC TAAAAAATGA AACAGATATA GAATTACAAA ACATTAATCA TG -#AAGATTGT 480 - - TTGAAAATGT CTGAGTATGA AAATGTAGAG CCGTTTGTTA GTGCATCAAC AA -#TTCAAACA 540 - - GGTATTGGTA TTGCGGGTAA AATACTTGGT ACCCTAGGCG TTCCTTTTGC AG -#GACAAGTA 600 - - GCTAGTCTTT ATAGTTTTAT CTTAGGTGAG CTATGGCCTA AGGGGAAAAA TC -#AATGGGAA 660 - - ATCTTTATGG AACATGTAGA AGAGATTATT AATCAAAAAA TATCAACTTA TG -#CAAGAAAT 720 - - AAAGCACTTA CAGACTTGAA AGGATTAGGA GATGCCTTAG CTGTCTACCA TG -#ATTCGCTT 780 - - GAAAGTTGGG TTGGAAATCG TAATAACACA AGGGCTAGGA GTGTTGTCAA GA -#GCCAATAT 840 - - ATCGCATTAG AATTGATGTT CGTTCAGAAA CTACCTTCTT TTGCAGTGTC TG -#GAGAGGAG 900 - - GTACCATTAT TACCGATATA TGCCCAAGCT GCAAATTTAC ATTTGTTGCT AT -#TAAGAGAT 960 - - GCATCTATTT TTGGAAAAGA GTGGGGATTA TCATCTTCAG AAATTTCAAC AT -#TTTATAAC 1020 - - CGTCAAGTCG AACGAGCAGG AGATTATTCC TACCATTGTG TGAAATGGTA TA -#GCACAGGT 1080 - - CTAAATAACT TGAGGGGTAC AAATGCCGAA AGTTGGGTAC GATATAATCA AT -#TCCGTAGA 1140 - - GACATGACTT TAATGGTACT AGATTTAGTG GCACTATTTC CAAGCTATGA TA -#CACAAATG 1200 - - TATCCAATTA AAACTACAGC CCAACTTACA AGAGAAGTAT ATACAGACGC AA -#TTGGGACA 1260 - - GTACATCCGC ATCCAAGTTT TACAAGTACG ACTTGGTATA ATAATAATGC AC -#CTTCGTTC 1320 - - TCTGCCATAG AGGCTGCTGT TGTTCGAAAC CCGCATCTAC TCGATTTTCT AG -#AACAAGTT 1380 - - ACAATTTACA GCTTATTAAG TCGATGGAGT AACACTCAGT ATATGAATAT GT -#GGGGAGGA 1440 - - CATAAACTAG AATTCCGAAC AATAGGAGGA ACGTTAAATA TCTCAACACA AG -#GATCTACT 1500 - - AATACTTCTA TTAATCCTGT AACATTACCG TTCACTTCTC GAGACGTCTA TA -#GGACTGAA 1560 - - TCATTGGCAG GGCTGAATCT ATTTTTAACT CAACCTGTTA ATGGAGTACC TA -#GGGTTGAT 1620 - - TTTCATTGGA AATTCGTCAC ACATCCGATC GCATCTGATA ATTTCTATTA TC -#CAGGGTAT 1680 - - GCTGGAATTG GGACGCAATT ACAGGATTCA GAAAATGAAT TACCACCTGA AG -#CAACAGGA 1740 - - CAGCCAAATT ATGAATCTTA TAGTCATAGA TTATCTCATA TAGGACTCAT TT -#CAGCATCA 1800 - - CATGTGAAAG CATTGGTATA TTCTTGGACG CATCGTAGTG CAGATCGTAC AA -#ATACAATT 1860 - - GAGCCAAATA GCATTACACA AATACCATTA GTAAAAGCTT TCAATCTGTC TT -#CAGGTGCC 1920 - - GCTGTAGTGA GAGGACCAGG ATTTACAGGT GGGGATATCC TTCGAAGAAC GA -#ATACTGGT 1980 - - ACATTTGGGG ATATACGAGT AAATATTAAT CCACCATTTG CACAAAGATA TC -#GCGTGAGG 2040 - - ATTCGCTATG CTTCTACCAC AGATTTACAA TTCCATACGT CAATTAACGG TA -#AAGCTATT 2100 - - AATCAAGGTA ATTTTTCAGC AACTATGAAT AGAGGAGAGG ACTTAGACTA TA -#AAACCTTT 2160 - - MGAACTGTAG GCTTTACCAC TCCATTTAGC TTTTTAGATG TACAAAGTAC AT -#TCACAATA 2220 - - GGTGCTTGGA ACTTCTCTTC AGGTAACGAA GTTTATATAG ATAGAATTGA AT -#TTGTTCCG 2280 - - GTAGAAGTAA CATATGAGGC AGAATATGAT TTTGAAAAAG CGCAAGAGAA GG -#TTACTGCA 2340 - - CTGTTTACAT CTACGAATCC AAGAGGATTA AAAACAGATG TAAAGGATTA TC -#ATATTGAC 2400 - - CAGGTATCAA ATTTAGTAGA GTCTCTATCA GATGAATTCT ATCTTGATGA AA -#AGAGAGAA 2460 - - TTATTCGAGA TAGTTAAATA CGCGAAGCAA CTCCATATTG AGCGTAACAT GT -#AGAATTAA 2520 - - AATCTACCTA AATCCAGAAA AATAAAAGGG TTAAATATAC AATTCTTGTA CC -#AATATTTT 2580 - - GAGTGATTAG ATGTAGGATG AAATTTAATT GTATGCTATT TAACAGTAGA GA -#TATTAAAA 2640 - - ATTAATTTAT CTATACATTA ATAGTATAGA CATACAAACA TAAGAGAGCA TT -#GTCTTTTC 2700 - - GTAGGCTACA ATGCTCTCTA TTTACTATTT ATTTTTCTTT TGTATCTTCA AA -#TTGACGTT 2760 - - GTTCTAAGCG TTCTATTGCA GCTCGTCGTT TAGTATCATC AATGTTTGTA TA -#AAGAGATG 2820 - - TTGTTTCCAT AGAATTATGT CCCATTTGAT TTGCTAATAA TACTAAATCT TT -#ATTTTCAT 2880 - - TATAGTGATT AGTAGCATAA GTATGACGTA ATTTATGAGG GCTTTTCTTT TC -#ATCAAAAG 2940 - - CCCTTGTGTA TTTCTCTGTA AGCTT - # - # 2965 - - - - (2) INFORMATION FOR SEQ ID NO:2: - - (i) SEQUENCE CHARACTERISTICS: (A) LENGTH: 2965 base - #pairs (B) TYPE: nucleic acid (C) STRANDEDNESS: both (D) TOPOLOGY: linear - - (ii) MOLECULE TYPE: DNA (genomic) - - (ix) FEATURE: (A) NAME/KEY: CDS (B) LOCATION: 1..2965 - - (xi) SEQUENCE DESCRIPTION: SEQ ID NO:2: - - CAT ATG TAT AGA GCA ACT TAA TCA AGC AGA GA - #T ATT TTC ACC TAT CGA 48 His Met Tyr Arg Ala Thr * Ser Ser Arg - # Asp Ile Phe Thr Tyr Arg 1 5 - # 10 - # 15 - - TGA AAA TAT CTC TGC TTT TTC TTT TTT TAT TT - #G GTA TAT GCT TTA CTT 96 * Lys Tyr Leu Cys Phe Phe Phe Phe Tyr - # Leu Val Tyr Ala Leu Leu - - 20 - # 25 - # 30 - - GTA ATC GAA AAT AAA GCA CTA ATA AGA GTA TT - #T ATA GGT GTT TGA AGT 144 Val Ile Glu Asn Lys Ala Leu Ile Arg Val Ph - #e Ile Gly Val * Ser 35 - # 40 - # 45 - - TAT TTC AGT TCA TTT TTA AAG AAG GTT TAA AG - #A CGT TAG AAA GTT ATT 192 Tyr Phe Ser Ser Phe Leu Lys Lys Val * - # Arg Arg * Lys Val Ile 50 - # 55 - # 60 - - AAG GAA TAA TAT TTA TTA GTA AAT TCC ACA TA - #T ATT ATA TAA TTA ATT 240 Lys Glu * Tyr Leu Leu Val Asn Ser Thr - # Tyr Ile Ile * Leu Ile 65 - # 70 - # 75 - # 80 - - ATG AAA TAT ATG TAT AAA TTG AAA ATG CTT TA - #T TTG ACA TTA CAG CTA 288 Met Lys Tyr Met Tyr Lys Leu Lys Met Leu Ty - #r Leu Thr Leu Gln Leu 85 - # 90 - # 95 - - AGT ATA ATT TTG TAT GAA TAA AAT TAT ATC TG - #A AAA TTA AAT AAT AGT 336 Ser Ile Ile Leu Tyr Glu * Asn Tyr Ile - # * Lys Leu Asn Asn Ser 100 - # 105 - # 110 - - ATA AGT GGA GGG ATT AAT ATG AAA CTA AAG AA - #T CAA GAT AAG CAT CAA 384 Ile Ser Gly Gly Ile Asn Met Lys Leu Lys As - #n Gln Asp Lys His Gln 115 - # 120 - # 125 - - AGT TTT TCT AGC AAT GCG AAA GTA GAT AAA AT - #C TCT ACG GAT TCA CTA 432 Ser Phe Ser Ser Asn Ala Lys Val Asp Lys Il - #e Ser Thr Asp Ser Leu 130 - # 135 - # 140 - - AAA AAT GAA ACA GAT ATA GAA TTA CAA AAC AT - #T AAT CAT GAA GAT TGT 480 Lys Asn Glu Thr Asp Ile Glu Leu Gln Asn Il - #e Asn His Glu Asp Cys 145 1 - #50 1 - #55 1 -#60 - - TTG AAA ATG TCT GAG TAT GAA AAT GTA GAG CC - #G TTT GTT AGT GCATCA 528 Leu Lys Met Ser Glu Tyr Glu Asn Val Glu Pr - #o Phe Val Ser Ala Ser 165 - # 170 - # 175 - - ACA ATT CAA ACA GGT ATT GGT ATT GCG GGT AA - #A ATA CTT GGT ACC CTA 576 Thr Ile Gln Thr Gly Ile Gly Ile Ala Gly Ly - #s Ile Leu Gly Thr Leu 180 - # 185 - # 190 - - GGC GTT CCT TTT GCA GGA CAA GTA GCT AGT CT - #T TAT AGT TTT ATC TTA 624 Gly Val Pro Phe Ala Gly Gln Val Ala Ser Le - #u Tyr Ser Phe Ile Leu 195 - # 200 - # 205 - - GGT GAG CTA TGG CCT AAG GGG AAA AAT CAA TG - #G GAA ATC TTT ATG GAA 672 Gly Glu Leu Trp Pro Lys Gly Lys Asn Gln Tr - #p Glu Ile Phe Met Glu 210 - # 215 - # 220 - - CAT GTA GAA GAG ATT ATT AAT CAA AAA ATA TC - #A ACT TAT GCA AGA AAT 720 His Val Glu Glu Ile Ile Asn Gln Lys Ile Se - #r Thr Tyr Ala Arg Asn 225 2 - #30 2 - #35 2 -#40 - - AAA GCA CTT ACA GAC TTG AAA GGA TTA GGA GA - #T GCC TTA GCT GTCTAC 768 Lys Ala Leu Thr Asp Leu Lys Gly Leu Gly As - #p Ala Leu Ala Val Tyr 245 - # 250 - # 255 - - CAT GAT TCG CTT GAA AGT TGG GTT GGA AAT CG - #T AAT AAC ACA AGG GCT 816 His Asp Ser Leu Glu Ser Trp Val Gly Asn Ar - #g Asn Asn Thr Arg Ala 260 - # 265 - # 270 - - AGG AGT GTT GTC AAG AGC CAA TAT ATC GCA TT - #A GAA TTG ATG TTC GTT 864 Arg Ser Val Val Lys Ser Gln Tyr Ile Ala Le - #u Glu Leu Met Phe Val 275 - # 280 - # 285 - - CAG AAA CTA CCT TCT TTT GCA GTG TCT GGA GA - #G GAG GTA CCA TTA TTA 912 Gln Lys Leu Pro Ser Phe Ala Val Ser Gly Gl - #u Glu Val Pro Leu Leu 290 - # 295 - # 300 - - CCG ATA TAT GCC CAA GCT GCA AAT TTA CAT TT - #G TTG CTA TTA AGA GAT 960 Pro Ile Tyr Ala Gln Ala Ala Asn Leu His Le - #u Leu Leu Leu Arg Asp 305 3 - #10 3 - #15 3 -#20 - - GCA TCT ATT TTT GGA AAA GAG TGG GGA TTA TC - #A TCT TCA GAA ATTTCA 1008 Ala Ser Ile Phe Gly Lys Glu Trp Gly Leu Se - #r Ser Ser Glu Ile Ser 325 - # 330 - # 335 - - ACA TTT TAT AAC CGT CAA GTC GAA CGA GCA GG - #A GAT TAT TCC TAC CAT 1056 Thr Phe Tyr Asn Arg Gln Val Glu Arg Ala Gl - #y Asp Tyr Ser Tyr His 340 - # 345 - # 350 - - TGT GTG AAA TGG TAT AGC ACA GGT CTA AAT AA - #C TTG AGG GGT ACA AAT 1104 Cys Val Lys Trp Tyr Ser Thr Gly Leu Asn As - #n Leu Arg Gly Thr Asn 355 - # 360 - # 365 - - GCC GAA AGT TGG GTA CGA TAT AAT CAA TTC CG - #T AGA GAC ATG ACT TTA 1152 Ala Glu Ser Trp Val Arg Tyr Asn Gln Phe Ar - #g Arg Asp Met Thr Leu 370 - # 375 - # 380 - - ATG GTA CTA GAT TTA GTG GCA CTA TTT CCA AG - #C TAT GAT ACA CAA ATG 1200 Met Val Leu Asp Leu Val Ala Leu Phe Pro Se - #r Tyr Asp Thr Gln Met 385 3 - #90 3 - #95 4 -#00 - - TAT CCA ATT AAA ACT ACA GCC CAA CTT ACA AG - #A GAA GTA TAT ACAGAC 1248 Tyr Pro Ile Lys Thr Thr Ala Gln Leu Thr Ar - #g Glu Val Tyr Thr Asp 405 - # 410 - # 415 - - GCA ATT GGG ACA GTA CAT CCG CAT CCA AGT TT - #T ACA AGT ACG ACT TGG 1296 Ala Ile Gly Thr Val His Pro His Pro Ser Ph - #e Thr Ser Thr Thr Trp 420 - # 425 - # 430 - - TAT AAT AAT AAT GCA CCT TCG TTC TCT GCC AT - #A GAG GCT GCT GTT GTT 1344 Tyr Asn Asn Asn Ala Pro Ser Phe Ser Ala Il - #e Glu Ala Ala Val Val 435 - # 440 - # 445 - - CGA AAC CCG CAT CTA CTC GAT TTT CTA GAA CA - #A GTT ACA ATT TAC AGC 1392 Arg Asn Pro His Leu Leu Asp Phe Leu Glu Gl - #n Val Thr Ile Tyr Ser 450 - # 455 - # 460 - - TTA TTA AGT CGA TGG AGT AAC ACT CAG TAT AT - #G AAT ATG TGG GGA GGA 1440 Leu Leu Ser Arg Trp Ser Asn Thr Gln Tyr Me - #t Asn Met Trp Gly Gly 465 4 - #70 4 - #75 4 -#80 - - CAT AAA CTA GAA TTC CGA ACA ATA GGA GGA AC - #G TTA AAT ATC TCAACA 1488 His Lys Leu Glu Phe Arg Thr Ile Gly Gly Th - #r Leu Asn Ile Ser Thr 485 - # 490 - # 495 - - CAA GGA TCT ACT AAT ACT TCT ATT AAT CCT GT - #A ACA TTA CCG TTC ACT 1536 Gln Gly Ser Thr Asn Thr Ser Ile Asn Pro Va - #l Thr Leu Pro Phe Thr 500 - # 505 - # 510 - - TCT CGA GAC GTC TAT AGG ACT GAA TCA TTG GC - #A GGG CTG AAT CTA TTT 1584 Ser Arg Asp Val Tyr Arg Thr Glu Ser Leu Al - #a Gly Leu Asn Leu Phe 515 - # 520 - # 525 - - TTA ACT CAA CCT GTT AAT GGA GTA CCT AGG GT - #T GAT TTT CAT TGG AAA 1632 Leu Thr Gln Pro Val Asn Gly Val Pro Arg Va - #l Asp Phe His Trp Lys 530 - # 535 - # 540 - - TTC GTC ACA CAT CCG ATC GCA TCT GAT AAT TT - #C TAT TAT CCA GGG TAT 1680 Phe Val Thr His Pro Ile Ala Ser Asp Asn Ph - #e Tyr Tyr Pro Gly Tyr 545 5 - #50 5 - #55 5 -#60 - - GCT GGA ATT GGG ACG CAA TTA CAG GAT TCA GA - #A AAT GAA TTA CCACCT 1728 Ala Gly Ile Gly Thr Gln Leu Gln Asp Ser Gl - #u Asn Glu Leu Pro Pro 565 - # 570 - # 575 - - GAA GCA ACA GGA CAG CCA AAT TAT GAA TCT TA - #T AGT CAT AGA TTA TCT 1776 Glu Ala Thr Gly Gln Pro Asn Tyr Glu Ser Ty - #r Ser His Arg Leu Ser 580 - # 585 - # 590 - - CAT ATA GGA CTC ATT TCA GCA TCA CAT GTG AA - #A GCA TTG GTA TAT TCT 1824 His Ile Gly Leu Ile Ser Ala Ser His Val Ly - #s Ala Leu Val Tyr Ser 595 - # 600 - # 605 - - TGG ACG CAT CGT AGT GCA GAT CGT ACA AAT AC - #A ATT GAG CCA AAT AGC 1872 Trp Thr His Arg Ser Ala Asp Arg Thr Asn Th - #r Ile Glu Pro Asn Ser 610 - # 615 - # 620 - - ATT ACA CAA ATA CCA TTA GTA AAA GCT TTC AA - #T CTG TCT TCA GGT GCC 1920 Ile Thr Gln Ile Pro Leu Val Lys Ala Phe As - #n Leu Ser Ser Gly Ala 625 6 - #30 6 - #35 6 -#40 - - GCT GTA GTG AGA GGA CCA GGA TTT ACA GGT GG - #G GAT ATC CTT CGAAGA 1968 Ala Val Val Arg Gly Pro Gly Phe Thr Gly Gl - #y Asp Ile Leu Arg Arg 645 - # 650 - # 655 - - ACG AAT ACT GGT ACA TTT GGG GAT ATA CGA GT - #A AAT ATT AAT CCA CCA 2016 Thr Asn Thr Gly Thr Phe Gly Asp Ile Arg Va - #l Asn Ile Asn Pro Pro 660 - # 665 - # 670 - - TTT GCA CAA AGA TAT CGC GTG AGG ATT CGC TA - #T GCT TCT ACC ACA GAT 2064 Phe Ala Gln Arg Tyr Arg Val Arg Ile Arg Ty - #r Ala Ser Thr Thr Asp 675 - # 680 - # 685 - - TTA CAA TTC CAT ACG TCA ATT AAC GGT AAA GC - #T ATT AAT CAA GGT AAT 2112 Leu Gln Phe His Thr Ser Ile Asn Gly Lys Al - #a Ile Asn Gln Gly Asn 690 - # 695 - # 700 - - TTT TCA GCA ACT ATG AAT AGA GGA GAG GAC TT - #A GAC TAT AAA ACC TTT 2160 Phe Ser Ala Thr Met Asn Arg Gly Glu Asp Le - #u Asp Tyr Lys Thr Phe 705 7 - #10 7 - #15 7 -#20 - - MGA ACT GTA GGC TTT ACC ACT CCA TTT AGC TT - #T TTA GAT GTA CAAAGT 2208 Arg Thr Val Gly Phe Thr Thr Pro Phe Ser Ph - #e Leu Asp Val Gln Ser 725 - # 730 - # 735 - - ACA TTC ACA ATA GGT GCT TGG AAC TTC TCT TC - #A GGT AAC GAA GTT TAT 2256 Thr Phe Thr Ile Gly Ala Trp Asn Phe Ser Se - #r Gly Asn Glu Val Tyr 740 - # 745 - # 750 - - ATA GAT AGA ATT GAA TTT GTT CCG GTA GAA GT - #A ACA TAT GAG GCA GAA 2304 Ile Asp Arg Ile Glu Phe Val Pro Val Glu Va - #l Thr Tyr Glu Ala Glu 755 - # 760 - # 765 - - TAT GAT TTT GAA AAA GCG CAA GAG AAG GTT AC - #T GCA CTG TTT ACA TCT 2352 Tyr Asp Phe Glu Lys Ala Gln Glu Lys Val Th - #r Ala Leu Phe Thr Ser 770 - # 775 - # 780 - - ACG AAT CCA AGA GGA TTA AAA ACA GAT GTA AA - #G GAT TAT CAT ATT GAC 2400 Thr Asn Pro Arg Gly Leu Lys Thr Asp Val Ly - #s Asp Tyr His Ile Asp 785 7 - #90 7 - #95 8 -#00 - - CAG GTA TCA AAT TTA GTA GAG TCT CTA TCA GA - #T GAA TTC TAT CTTGAT 2448 Gln Val Ser Asn Leu Val Glu Ser Leu Ser As - #p Glu Phe Tyr Leu Asp 805 - # 810 - # 815 - - GAA AAG AGA GAA TTA TTC GAG ATA GTT AAA TA - #C GCG AAG CAA CTC CAT 2496 Glu Lys Arg Glu Leu Phe Glu Ile Val Lys Ty - #r Ala Lys Gln Leu His 820 - # 825 - # 830 - - ATT GAG CGT AAC ATG TAG AAT TAA AAT CTA CC - #T AAA TCC AGA AAA ATA 2544 Ile Glu Arg Asn Met * Asn * Asn - #Leu Pro Lys Ser Arg Lys Ile 835 - # 840 - # 845 - - AAA GGG TTA AAT ATA CAA TTC TTG TAC CAA TA - #T TTT GAG TGA TTA GAT 2592 Lys Gly Leu Asn Ile Gln Phe Leu Tyr Gln Ty - #r Phe Glu * Leu Asp 850 - # 855 - # 860 - - GTA GGA TGA AAT TTA ATT GTA TGC TAT TTA AC - #A GTA GAG ATA TTA AAA 2640 Val Gly * Asn Leu Ile Val Cys Tyr Leu - # Thr Val Glu Ile Leu Lys 865 8 - #70 8 - #75 8 -#80 - - ATT AAT TTA TCT ATA CAT TAA TAG TAT AGA CA - #T ACA AAC ATA AGAGAG 2688 Ile Asn Leu Ser Ile His * * Tyr - #Arg His Thr Asn Ile Arg Glu 885 - # 890 - # 895 - - CAT TGT CTT TTC GTA GGC TAC AAT GCT CTC TA - #T TTA CTA TTT ATT TTT 2736 His Cys Leu Phe Val Gly Tyr Asn Ala Leu Ty - #r Leu Leu Phe Ile Phe 900 - # 905 - # 910 - - CTT TTG TAT CTT CAA ATT GAC GTT GTT CTA AG - #C GTT CTA TTG CAG CTC 2784 Leu Leu Tyr Leu Gln Ile Asp Val Val Leu Se - #r Val Leu Leu Gln Leu 915 - # 920 - # 925 - - GTC GTT TAG TAT CAT CAA TGT TTG TAT AAA GA - #G ATG TTG TTT CCA TAG 2832 Val Val * Tyr His Gln Cys Leu Tyr Lys - # Glu Met Leu Phe Pro * 930 - # 935 - # 940 - - AAT TAT GTC CCA TTT GAT TTG CTA ATA ATA CT - #A AAT CTT TAT TTT CAT 2880 Asn Tyr Val Pro Phe Asp Leu Leu Ile Ile Le - #u Asn Leu Tyr Phe His 945 9 - #50 9 - #55 9 -#60 - - TAT AGT GAT TAG TAG CAT AAG TAT GAC GTA AT - #T TAT GAG GGC TTTTCT 2928 Tyr Ser Asp * * His Lys Tyr Asp - #Val Ile Tyr Glu Gly Phe Ser 965 - # 970 - # 975 - - TTT CAT CAA AAG CCC TTG TGT ATT TCT CTG TA - #A GCT T- # 2965 Phe His Gln Lys Pro Leu Cys Ile Ser Leu - #* Ala 980 - # 985__________________________________________________________________________

Bacterial genes

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