BINDING FUNCTION 3 (BF3) SITE COMPOUNDS AS THERAPEUTICS AND METHODS FOR THEIR USE

Information

  • Patent Application
  • 20210024464
  • Publication Number
    20210024464
  • Date Filed
    January 28, 2020
    4 years ago
  • Date Published
    January 28, 2021
    3 years ago
Abstract
This invention provides compound having a structure of Formulas:
Description
TECHNICAL FIELD

This invention relates to therapeutics, their uses and methods for the treatment of various indications, including various cancers. In particular the invention relates to therapies and methods of treatment for cancers such as prostate cancer.


BACKGROUND

Androgens are known to mediate their effects through the androgen receptor (AR). Androgens play a role in a wide range of developmental and physiological responses, for example, male sexual differentiation, maintenance of spermatogenesis, and male gonadotropin regulation (R. K. Ross, G. A. Coetzee, C. L. Pearce, J. K. Reichardt, P. Bretsky, L. N. Kolonel, B. E. Henderson, E. Lander, D. Altshuler & G. Daley, Eur Urol 35, 355-361 (1999); A. A. Thomson, Reproduction 121, 187-195 (2001); N. Tanji, K. Aoki & M. Yokoyama, Arch Androl 47, 1-7 (2001)). Also, androgens are associated with the development of prostate carcinogenesis. Induction of prostatic carcinogenesis in rodent models has been associated with androgens (R. L. Noble, Cancer Res 37, 1929-1933 (1977); R. L. Noble, Oncology 34, 138-141 (1977)) and men receiving androgens in the form of anabolic steroids are reported to have a higher incidence of prostate cancer (J. T. Roberts & D. M. Essenhigh, Lancet 2, 742 (1986); J. A. Jackson, J. Waxman & A. M. Spiekerman, Arch Intern Med 149, 2365-2366 (1989); P. D. Guinan, W. Sadoughi, H. Alsheik, R. J. Ablin, D. Alrenga & I. M. Bush, Am J Surg 131, 599-600 (1976)). Furthermore, prostate cancer does not develop if humans or dogs are castrated before puberty (J. D. Wilson & C. Roehrborn, J Clin EndocrinolMetab 84, 4324-4331 (1999); G. Wilding, Cancer Surv 14, 113-130 (1992)). Castration of adult males causes involution of the prostate and apoptosis of prostatic epithelium (E. M. Bruckheimer & N. Kyprianou, Cell Tissue Res 301, 153-162 (2000); J. T. Isaacs, Prostate 5, 545-557 (1984)). This dependency on androgens provides the underlying rationale for treating prostate cancer with chemical or surgical castration (i.e. androgen ablation).


Prostate cancer is the second leading cause of male cancer-related death in Western countries (Damber, J. E. and Aus, G. Lancet (2008) 371:1710-1721). Numerous studies have shown that the androgen receptor (AR) is central not only to the development of prostate cancer, but also the progression of the disease to the castration resistance state (Taplin, M. E. et al. J. Clin. Oncol. (2003) 21:2673-8; and Tilley, W. D. et al. Cancer Res. (1994) 54:4096-4102). Thus, effective inhibition of human AR remains one of the most effective therapeutic approaches to the treatment of advanced, metastatic prostate cancer. The AR possesses a modular organization characteristic of all nuclear receptors. It is comprised of an N-terminal domain, a central DNA binding domain, a short hinge region, and C-terminal domain that contains a hormone ligand binding pocket and the Activation Function-2 (AF2) site (Gao, W. Q. et al. Chem. Rev. (2005) 105:3352-3370). The latter represents a hydrophobic groove on the AR surface which is flanked with regions of positive and negative charges—“charge clamps” that are significant for binding AR activation factors (Zhou, X. E. et al. J. Biol. Chem. (2010) 285:9161-9171). Recent studies have identified a novel site on the AR called Binding Function 3 (BF3) that is involved into AR transcriptional activity.


It has been proposed a small molecule bound to the BF3 site could cause the AR protein to undergo an allosteric modification that prevents AR interactions with co-activators. Importantly, the BF3 site is located near, but distinct from, the ligand-binding site that is normally targeted by conventional anti-androgen drugs. Chemicals such as flufenamic acid (FLUF), thriiodothyronine (T3) and 3,3′,5-triiodo thyroacetic acid (TRIAC), can bind to the BF3 cleft, inhibit AF2 interactions and interfere with AR activity (Estebanez-Perpina, E. et al. Proc Natl Acad Sci USA (2007) 104:16074-16079). While these compounds revealed the importance of the BF3 site, they have shown a low potency (IC50>50 μM) and were found to bind non-specifically to the AR.


The activation of AR follows a well characterized pathway: in the cytoplasm, the receptor is associated with chaperone proteins that maintain agonist binding conformation of the AR (Georget, V. et al. Biochemistry (2002) 41:11824-11831). Upon binding of an androgen, the AR undergoes a series of conformational changes, disassociation from chaperones, dimerization and translocation into the nucleus (Fang, Y. F. et al. J. Biol. Chem. (1996) 271:28697-28702; and Wong, C. I. et al. J. Biol. Chem. (1993) 268:19004-19012) where it further interacts with co-activator proteins at the AF2 site (Zhou, X. E. et al. J. Biol. Chem. (2010) 285:9161-9171). This event triggers the recruitment of RNA polymerase II and other factors to form a functional transcriptional complex with the AR.


Notably, the current anti-androgens such as bicalutamide, flutamide, nilutamide and MDV3100, all target this particular process. However, instead of affecting the AR-cofactor interaction directly, these anti-androgens act indirectly, by binding to the AR ligand binding site. Thus, by preventing androgens from binding they also prevent conformational changes of the receptor that are necessary for co-activator interactions. While treatment with these AR inhibitors can initially suppress the prostate cancer growth, long term hormone therapy becomes progressively less effective (Taplin, M. E. et al. J. Clin. Oncol. (2003) 21:2673-8; and Tilley, W. D. et al. Cancer Res. (1994) 54:4096-4102). Factors that make the AR less sensitive to conventional anti-androgens include resistance mutations at the ligand binding site that can even lead AR antagonists to act as agonists further contributing to cancer progression (Chen, Y. et al. Lancet Oncol. (2009) 10:981-991).


Androgens also play a role in female cancers. One example is ovarian cancer where elevated levels of androgens are associated with an increased risk of developing ovarian cancer (K. J. Helzlsouer, et al., JAMA 274, 1926-1930 (1995); R. J. Edmondson, et al, Br J Cancer 86, 879-885 (2002)). The AR has been detected in a majority of ovarian cancers (H. A. Risch, J Natl Cancer Inst 90, 1774-1786 (1998); B. R. Rao & B. J. Slotman, Endocr Rev 12, 14-26 (1991); G. M. Clinton & W. Hua, Crit Rev Oncol Hematol 25, 1-9 (1997)), whereas estrogen receptor-alpha (ERa) and the progesterone receptor are detected in less than 50% of ovarian tumors.


SUMMARY

This invention is based in part on the fortuitous discovery that compounds described herein modulate androgen receptor (AR) activity. Specifically, compounds identified herein, show inhibition of Androgen Receptor Binding Function-3 (BF3).


In accordance with a first aspect, there is provided a method of modulating AR activity, the method comprising administering a compound having the structure of Formula I:




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wherein,

custom-character is either a single or a double bond between D2 and D3;


A1 may be H, CH3, CH2CH3, OH, CH2OH, OCH3,




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Alternatively A1 may be F, Br or Cl, provided that D3 is not




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A2 may be H, Br, OH, Cl, F, I, CH3, NH2, OCH3,




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A3 may be H, Br, NH2, F, Cl, OCH3, CH3,




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I, OH,



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or ═O;

A4 may be H, Br, Cl, F, I, CH3, NH2, OH, OCH3,




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or ═O; D1 is



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wherein


E1, E8, E14, E16, E22, E30, and E41, are each independently CH or N;


E2, E3, E4, E5, and E6, are each independently H, OH,




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Br, Cl, F, I, or CH3;

E7 is CH2, O, NH, or C═O;


E9, E10, E11, E12, and E13, are each independently H,




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OH, Br, Cl, F, I, or CH3;

E15 is CH2, O, NH, or C═O;


E17, E18, E19, E20, and E21, are each independently H,




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OH, Br, Cl, F, I, or CH3;

E23 is CH, CH2, O, N, NH, or C═O;


where custom-character is either a single or a double bond between E22 and E23;


E24 is CH2, O, NH, or C═O;


E25, E26, E27, E28, and E29, are each independently H,




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OH, Br, Cl, F, I, or CH3;

E31 is N, CH, CBr, CCl, CF, COH, C═O, or CCH3;


E32 is NH, CH2, O, or S;


E33, E34, E35, and E36, are each independently H, OH,




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Br, Cl, F, I, or CH3;

E37 is S, O, NH, CH2, NCH3,




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C═O, N—N═O, N—CH2—CH2—OH, N—CH2—C(O)—O—CH2—CH3,




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N-E38, CH-E39,




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E38 is NH2, O—CH3, O—NH2, CH2—N═O, CH2—CH3, N(H)OH, C(O)—O—CH2—CH3, C—O—CH3, C(O)—O—CH3, C(O)—O—CH2—CH2—CH3, CO—CH2—CH2—CH3, C(O)—CH2—CH2—CH3, C(O)—O—CH2—CH3, or;




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E39 is CH3, CH2—CH3, CH2—N═O, OH, OOH, NH2, O—CH3, O—NH2, CH2—N═O, CH2—CH3, N(H)OH, C(O)—O—CH2—CH3, C—O—CH3, C(O)—O—CH3, C(O)—O—CH2—CH2—CH3, CO—CH2—CH2—CH3, C(O)—CH2—CH2—CH3, or C(O)—O—CH2—CH3;


E40 is CH3, CH2—CH3, CH2—N═O, OH, OOH, NH2, O—CH3, O—NH2, CH2—N═O, CH2—CH3, N(H)OH, C(O)—O—CH2—CH3, C—O—CH3, C(O)—O—CH3, C(O)—O—CH2—CH2—CH3, CO—CH2—CH2—CH3, C(O)—CH2—CH2—CH3, or C(O)—O—CH2—CH3;


E42, E43, E44, E45, and E46, are each independently H,




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OH, Br, Cl, F, I, or CH3;

D2 is




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G1 is CH, N, CCH3, CH2,




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O, S, or NH;

G2 is C, CH, or N;


G3 is CH,




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CH2, or N;

G4 is




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G5, G6, and G7, are each independently H, OH, Br, Cl, F, I, or CH3;


G8 is NH, CH2, O, or S;


G9, G10, G11, and G12, are each independently H, OH, Br, Cl, F, I, or CH3;


G13 is C, CH, or N;


G14 is C═O, CH2, or NH;


G15 is C═O, CH2, or NH;


G16 is




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G17, G18, G19, G20, and G21, are each independently H, OH, Br, Cl, F, I, or CH3, provided that if G17 is OH, then one or more of G18, G19, G20, and G21 are selected from OH, Br, Cl, F, I, or CH3;


G22 is NH, CH2, O, or S;


G23, G24, G25, and G26, are each independently H, OH, Br, Cl, F, I, or CH3;


G27 is C, CH, CCH3, CC(O)OCH2CH3, or N;


G28 is C, CH, or N;


G29 is CH, CH2, C═O, CCH3, or N;


where custom-character is either a single or a double bond between G28 and G29;


G30 is CH2, N—N═O, NCH3, NCH2CH2OH, CH—N═O, CHCH3, CHCH2CH2OH, S, O,




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or NH;

G31, G32, and G33, are each independently H, OH, NH2, Br, Cl, F, I,




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OCH3,



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CH3, CH2OH, or absent when G36, G37, or G38 is N;


G34, is H, OH, NH2,




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OCH3, CH3, CH2OH, I or absent when G35 is N;


G35, G36, G37, and G38, are each independently C or N;


G39 is C, CH, or N;


G40 is CH, or N;


G41 is NH, S, O, or CH2;


G42, G43, G44, and G45, are each independently H, OH, Br, Cl, F, I, or CH3;


G46 is C, CH, or N;


G47, G48, G50, and G51, are each independently H, OH, Br, Cl, F, I, or CH3;


G49 is OH, Br, Cl, F, I or CH3;


G52 is C, CH, or N;


G53 is CH2, NH, S, or O;


G54, G55, G56, G57, and G5a, are each independently H, OH, Br, Cl, F, I, or CH3;


D3 may be




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D3 may be




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Alternatively, D3 may be




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provided that A1 is H, CH3, F, Cl or Br and A2 is H, CH3, NH2, OH or OCH3, A3 is H, F, Cl or Br and A4 is H, F, Cl or Br.


Alternatively, D3 may be




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provided A1 is CH3, A2 is F, A3 is H and A4 is H.


Alternatively, D3 may be




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provided that at least one of A1, A3 or A4 is F, Cl or Br and A2 is H, CH3, NH2, OH or OCH3.


Alternatively, D3 may be




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provided that at least one of A2 or A3 is F, Cl or Br.


Alternatively, D3 may be




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provided that A4 is H.


Alternatively, D3 may be




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provided that A1 is CH3.


Alternatively D3 may be




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provided that at least one of A or A2 is F, Cl, Br or CH3.


Alternatively, D3 may be




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provided that if A2 is F, Cl or Br then A3 is F, Cl or Br.


Alternatively, D3 may be




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provided that if A2 is F, Cl or Br then A1 is H, OH, CH2OH,




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CF3, F, Cl or Br, A3 is H, Br, NH2, F, Cl, OCH3,




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CF3, I, OH,



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CF3,



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or ═O and A4 is H, Br, Cl, F, I, CH3, NH2, OH, OCH3,




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or ═O.

Alternatively, D3 may be




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provided that if A2 is F, Cl or Br then A1 is not CH3.


Alternatively, D3 may be



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provided that if A2 is F, Cl or Br then A1 is not CH3.


Alternatively, D3 may be



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provided that if A2 is F, Cl or Br then at least one or both of A1 and A3 are F, Cl or Br.


Alternatively, D3 may be



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provided that if A1 is CH3 then A2 is not F, Br or Cl.


Alternatively D3 may be



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provided that if A1 is CH3 then A2 is H.


Alternatively, D3 may be




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provided that A1 is F, Br or Cl.


Alternatively, D3 is



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provided that A-A4 are all H.


Alternatively, D3 may be



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provided that if A4 is CH3, then A1 is CH2OH,




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CF3, F, Cl or Br, A2 is Br, NH2, F, Cl,




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CF3, I or



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and A3 is Br, Cl, F, I, CH3, NH2,




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CF3,



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or ═O.

Alternatively, D3 may be




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provided that A4 is H, and A1-4 are independently selected from Br, Cl, F, I, CH3, NH2,




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CF3,



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or ═O.
Alternatively, D3 may be



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provided that A2 is F and A3 is F.


Alternatively, D3 may be



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provided that A2 is F, Cl or Br and A3 is F, Cl or Br.


Alternatively, D3 may be



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provided that A1 is F, A3 is F and A4 is F.


Alternatively, D3 may be



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provided that A1 is F, Cl or Br, A3 is F, Cl or Br and A4 is F, Cl or Br.


Alternatively, D3 may be



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provided that A1 is F, Cl or Br, A3 is F, Cl or Br and A4 is F, Cl or Br.


Alternatively, D3 is



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provided that A2 is H, if A1 is CH3.


J1 is CH, N, CCH3, CH2, NCH3, CN═O, C═O,




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N—CH2—CH2—CH3, CH═O, N—N═O,




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NCH2C(O)OCH2CH3, N—CH2—C(O)—O—CH2—CH3, O, S, or NH.


J2 is CH, C, or N.


J3 is C═S, C═O, NH, or CH2.


J4 is CH or N;


J5 is CH2, NH, S or O;


J6, J7, J8, J9, J10, J11, J12, and J13 are each independently H, OH, Br, Cl, F, I, or CH3;


J14 is CH, C, or N;


J15 is C═S, C═O, NH, or CH2;


J16, J17, J18, J19, and J20 are each independently H, OH, Br, Cl, F, I,




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or CH3;

J21 is CH, C, or N;


J22 is CH2, or NH;


J23 is CH, or N;


J24, J25, J26, and J27 are each independently H, OH, Br, Cl, F, I, or CH3;


J28 is CH, C, or N;


J31 is H, OH, Br, F, I, C(O)NH2, OCH3, or CH3;


J29, J30, J32, and J33 are each independently H, OCH3, OH, Br, Cl, F, I, C(O)NH2, CF3,




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NH2, or CH3;


J34 is CH, C, or N;


J35, J36, J37, J38, and J39 are each independently H, OCH3, OH, Br, Cl, F, I, C(O)NH2, CF3,




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NH2, or CH3;


J40 is CH, C, or N;


J41 is H, OH, Br, Cl, F, I, NH2, or CH3, or




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J42, J43, J44, J45, and J46 are each independently H, OH, Br, Cl, F, I, NH2, or CH3;


J47 is CH, C, or N;


J49 is S, CH2, C═O, O, or NH;


J49 is CH2, C═O, S, O, or NH;


J55 is C, or N;


J50, J51, J52, J53, and J54, are each independently H, OH, NH2, Br, Cl, F, I,




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OCH3, CF3, CH3 or is absent when J50, J51, J52, J53, or J54 is N;


J56 is CH, C, or N;


J57 is N, or CH;


J58, J59, J60, J61, and J62, are each independently H, OH, NH2, Br, Cl, F, I,




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OCH3, CF3, or CH3;


J63, J64, J65, J66, and J67, are each independently H, OH, NH2, Br, Cl, F, I,




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OCH3, CF3, or CH3;


J63 is CH, C, or N;


J64 is CH, CH2, NH, CN═O, C═O, O, CCH3, NCH3, NC(O)OCH3,




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or N;

J65 is CH2, NH, C═O, O, S, NN═O, NCH3, NC(O)OCH3,




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J66, J67, J68, and J69 may each independently be H, OCH3, OH, Br, Cl, F, I, C(O)NH2, CF3,




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NH2, or CH3;


J70 is CH, C, or N;


J71, J72, J73, and J74 may each independently be H, OCH3, OH, Br, Cl, F, I, C(O)NH2, CF3,




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NH2, or CH3;


J75 may be CH, or N;


J77 is




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and


provided that one or more of D1-D3 links to at least one ring in addition to the bicyclic structure of Formula I. For example, compounds 13720-13726, do not link to at least one ring in addition to the bicyclic structure of Formula I, whereas, for example, 13566 and 13742 do link to at least one ring in addition to the bicyclic structure of Formula I.


In accordance with a further aspect, there is provided a use of a compound having the structure of Formula I as described herein for modulating AR activity.


In accordance with a further aspect, there is provided a use of a compound having the structure of Formula I as described herein for the manufacture of a medicament for modulating AR activity.


A1 may be H, CH3, CH2CH3, OH, CH2OH, OCH3,




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or CF3. Alternatively A1 may be F, Br or Cl, provided that D3 is not




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A may be H, CH3, OH, CH2OH, OCH3,




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or CF3. A1 may be H, CH3, OH, CH2OH, OCH3, or




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A1 may be H, CH3, OH, CH2OH, or OCH3. A1 may be H, CH3, OH, CH2OH, or




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A2 may be H, Br, OH, Cl, F, I, CH3, NH2, OCH3,




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CH3,



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or ═O. A2 may be H, Br, OH, Cl, or



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A2 may be H, Br, OH, Cl, F, I, CH3, NH2, OCH3 or ═O. A2 may be H, Br, OH, Cl, F, I, CH3, NH2 or OCH3. A2 may be H, Br, OH, or Cl. A2 may be H, Br, OH, Cl, or F.


A3 may be H, Br, NH2, F, Cl, OCH3, CH3,




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CF3, I, OH,



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or ═O. A3 may be H, Br, NH2, F, Cl, OCH3, CH3,




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or CF3. A3 may be H, Br, NH2, F, Cl, OCH3, CH3, OH or ═O. A3 may be H, Br, NH2, F, Cl, OCH3, CH3,




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CF3, or ═O. A3 may be H, Br, NH2, F, Cl, OCH3, CH3,




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CF3, OH or ═O. A3 may be H, Br, NH2, F, Cl, OCH3, CH3, OH or ═O. A3 may be H, Br, NH2, F, Cl, OCH3, or CH3.


A4 may be H, Br, Cl, F, I, CH3, NH2, OH, OCH3,




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CF3,



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or ═O. A4 may be H, Br. A4 may be H, Br, Cl, F, I, CH3, NH2, OH, OCH3 or ═O. A4 may be H, Br, Cl, F, CH3, NH2, OH, OCH3, or ═O. A4 may be H, Br, Cl, F, I, CH3, NH2, OH or OCH3. A4 may be H, Br, Cl, CH3, NH2, OH, OCH3,




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CF3,



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or ═O.

D1 may be




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D1 may be



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E1, E8, E14, E16, E22, E30, and E41, may each independently be CH or N. E1, E8, E14, E16, E22, E30, and E41, may be N. E1, E8, E14, E16, E22, E30, and E41, may be CH.


E2, E3, E4, E5, and E6, may each independently be H, OH,




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Br, Cl, F, I, or CH3. E2, E3, E4, E5, and E6, may each independently be H, OH, or




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E2, E3, E4, E5, and E6, may each independently be H or OH.


E7 may be CH2, O, NH, or C═O. E7 may be CH2. E7 may be CH2, O or C═O. E7 may be CH2 or O. E7 may be CH2, O, NH or C═O. E7 may be CH2, NH or C═O.


E9, E10, E11, E12, and E13, may each independently be H,




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OH, Br, Cl, F, I or CH3. E9, E10, E11, E12, and E13, may each independently be H or




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E9, E10, E11, E12, and E13, may each independently be H, OH, Br, Cl, F, I or CH3. E9, E10, E11, E12, and E13, may each independently be H,




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OH, Br, Cl, F, or CH3. E9, E10, E11, E12, and E13, may each independently be H, OH, or CH3. E9, E10, E11, E12, and E13, may each independently be H or CH3.


E15 may be CH2, O, NH or C═O. E15 may be NH. E15 may be CH2, O or NH. E15 may be O, NH, or C═O. E15 may be NH or C═O.


E17, E18, E19, E20, and E21, may each independently be H,




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OH, Br, Cl, F, I, or CH3. E17, E18, E19, E20, and E21, may each independently be H, OH, Br, Cl, F, I or CH3. E17, E18, E19, E20, and E21, may each independently be H, Cl, or CH3. E17, E18, E19, E20, and E21, may each independently be H, OH, Br, Cl, F or CH3.


E23 may be CH, CH2, O, N, NH, or C═O. E23 may be N. E23 may be O, N, NH, or C═O. E23 may be CH, CH2, O, N or NH. E23 may be N or NH.


E24 may be CH2, O, NH, or C═O. E24 may be NH. E24 may be CH2, NH, or C═O. E24 may be O or NH. E24 may be CH2, O or NH. E24 may be NH, or C═O. E24 may be CH2 or NH.


E25, E26, E27, E28, and E29, may each independently be H,




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OH, Br, Cl, F, I, or CH3. E25, E26, E27, E28, and E29, may each independently be H, OH, Br, Cl, F, I or CH3. E25, E26, E27, E28, and E29, may each independently be H or Cl. E25, E26, E27, E28, and E29, may each independently be H, OH, Br, Cl, F, or CH3. E25, E26, E27, E28, and E29, may each independently be H, OH, Cl or CH3. E25, E26, E27, E28, and E29, may each independently be H or CH3. E25, E26, E27, E28, and E29, may each independently be H, Br, Cl or CH3.


E31 may be N, CH, CBr, CCl, CF, COH, C═O, or CCH3. E31 may be N. E31 may be N, CH, COH, C═O, or CCH3. E31 may be N, CH, CCl, COH, C═O, or CCH3. E31 may be N, CH, COH or CCH3.


E32 may be NH, CH2, O, or S. E32 may be NH or O. E32 may be NH, CH2 or O. E32 may be NH. E32 may be O. E32 may be NH, O or S.


E33, E34, E35, and E36, may each independently be H, OH,




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Br, Cl, F, I, or CH3. E33, E34, E35, and E36, may each independently be H, OH, Br, Cl, F, I or CH3. E33, E34, E35, and E36, may each independently be H, OH,




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or CH3. E33, E34, E35, and E36, may each independently be H, OH or CH3.


E37 may be S, O, NH, CH2, NCH3,




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C═O, N—N═O, N—CH2—CH2—OH, N—CH2—C(O)—O—CH2—CH3,




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N-E38, CH-E39,




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E37 may be S, O, NH, CH2, NCH3,




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C═O, N—N═O, N—CH2—CH2—OH, N—CH2—C(O)—O—CH2—CH3 or




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E37 may be S, O, NH, CH2, NCH3,




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C═O, N—N═O, N—CH2—CH2—OH, N—CH2—C(O)—O—CH2—CH3,




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E37 may be S, O, NH, CH2, NCH3,




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C═O, N—N═O, N—CH2—CH2—OH, or N—CH2—C(O)—O—CH2—CH3.


E38 may be NH2, O—CH3, O—NH2, CH2—N═O, CH2—CH3, N(H)OH, C(O)—O—CH2—CH3, C—O—CH3, C(O)—O—CH3, C(O)—O—CH2—CH2—CH3, CO—CH2—CH2—CH3, C(O)—CH2—CH2—CH3, C(O)—O—CH2—CH3, or




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E38 may be NH2, O—CH3 or O—NH2. E3 may be NH2 or O—CH3.


E39 may be CH3, CH2—CH3, CH2—N═O, OH, OOH, NH2, O—CH3, O—NH2, CH2—N═O, CH2—CH3, N(H)OH, C(O)—O—CH2—CH3, C—O—CH3, C(O)—O—CH3, C(O)—O—CH2—CH2—CH3, CO—CH2—CH2—CH3, C(O)—CH2—CH2—CH3 or C(O)—O—CH2—CH3. E39 may be CH3, CH2—CH3, CH2—N═O, OH, OOH, NH2, O—CH3, O—NH2, CH2—N═O, or CH2—CH3. E39 may be CH3, CH2—CH3, OH, OOH, NH2, O—CH3, O—NH2, C—O—CH3 or C(O)—O—CH3.


E40 may be CH3, CH2—CH3, CH2—N═O, OH, OOH, NH2, O—CH3, O—NH2, CH2—N═O, CH2—CH3, N(H)OH, C(O)—O—CH2—CH3, C—O—CH3, C(O)—O—CH3, C(O)—O—CH2—CH2—CH3, CO—CH2—CH2—CH3, C(O)—CH2—CH2—CH3, or C(O)—O—CH2—CH3. E40 may be CH3, CH2—CH3, CH2—N═O, OH, OOH, NH2, O—CH3 or O—NH2.


E42, E43, E44, E45, and E46, may each independently be H,




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OH, Br, Cl, F, I or CH3. E42, E43, E44, E45, and E46, may each independently be H, OH, Cl, or CH3. E42, E43, E44, E45, and E46, may each independently be H or Cl. E42, E43, E44, E45, and E46, may each independently be H, Cl, or CH3. E42, E43, E44, E45, and E46, may each independently be H, OH or Cl.


D2 may be



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D2 may be



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D2 may be



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G1 may be CH, N, CCH3, CH2,




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O S or NH. G1 may be CH N CCH3, CH2, or




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G1 may be CH N CCH3, CH2,




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G1 may be CH, N, CCH3, CH2, O, S, or NH. G1 may be CH, N, CCH3 or CH2.


G2 may be C, CH, or N. G2 may be C. G2 may be C. G2 may be C or CH. G2 may be C or N.


G3 may be CH,



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CH2, or N. G3 may be CH,




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G4 may be



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G4 may be



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G4 may be



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G5, G6, and G7, may each independently be H, OH, Br, Cl, F, I, or CH3. G5, G6, and G7, may each independently be H or CH3. G5, G6, and G7, may each independently be H, OH, or CH3. G5, G6, and G7, may each independently be H, Br, Cl, F, or CH3. G5, G6, and G7, may each independently be H, OH, Br, CH3.


G8 may be NH, CH2, O, or S. G8 may be NH. G8 may be NH, O, or S. G8 may be NH, CH2, or S. G8 may be NH or S. G8 may be NH or CH2.


G9, G10, G11, and G12, may each independently be H, OH, Br, Cl, F, I or CH3. G9, G10, G11, and G12, may each independently be H or Br. G9, G10, G11, and G12, may each independently be H, OH, Br, Cl or F. G9, G10, G11, and G12, may each independently be H, OH, Br, Cl, F or CH3. G9, G10, G11, and G12, may each independently be H, OH or Br.


G13 may be C, CH, or N. G13 may be C or N. G13 may be N. G13 may be C.


G14 may be C═O, CH2, or NH. G14 may be NH. G14 may be CH2. G14 may be NH.


G15 may be C═O, CH2, or NH. G15 may be C═O. G15 may be CH2. G15 may be NH.


G16 may be



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G16 may be



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G16 may be



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G17, G18, G19, G20, and G21, are each independently H, OH, Br, Cl, F, I, or CH3, provided that if G17 is OH, then one or more of G18, G19, G20, and G21 are selected from OH, Br, Cl, F, I, or CH3.


G22 may be NH, CH2, O, or S. G22 may be NH. G22 may be NH or S. G22 may be NH, O or S. G22 may be NH or CH2. G22 may be NH, O, or S. G22 may be NH or O.


G23, G24, G25, and G26, may each independently be H, OH, Br, Cl, F, I or CH3. G23, G24, G25, and G26, may each independently be H or Br. G23, G24, G25, and G26, may each independently be H, OH, Br, Cl, F, or CH3. G23, G24, G25, and G26, may each independently be H, Br, Cl, F or I. G23, G24, G25, and G26, may each independently be H, OH, Br or CH3.


G27 may be C, CH, CCH3, CC(O)OCH2CH3, or N. G27 may be C, CH, CCH3 or CC(O)OCH2CH3. G27 may be C. G27 may be CH. G27 may be CCH3. G27 may be CC(O)OCH2CH3.


G28 may be C, CH, or N. G28 may be C or N. G29 may be C. G28 may be N.


G29 may be CH, CH2, C═O, CCH3, or N. G29 may be CH. G29 may be CH2. G29 may be C═O, CCH3.


G30 may be CH2, N—N═O, NCH3, NCH2CH2OH, CH—N═O, CHCH3, CHCH2CH2OH, S, O,




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or NH. G30 may be CH2, N—N═O, NCH3, NCH2CH2OH,




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or NH. G30 may be CH2, N—N═O, NCH3, NCH2CH2OH, CH—N═O, CHCH3, CHCH2CH2OH, S, O, or NH. G30 may be CH2, N—N═O, NCH3, NCH2CH2OH, or NH.


G31, G32, and G33, may each independently be H, OH, NH2, Br, Cl, F, I,




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OCH3, CF3, CH3, CH2OH, or absent when G36, G37, or G38 is N. G31, G32, and G33, may each independently be H, OH, NH2, Br, Cl, F, I,




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OCH3, CF3, CH3, CH2OH, or absent when G36, G37, or G38 is N. G31, G32, and G33, may each independently be H, OH, NH2, Br, Cl, F, OCH3, CH3, CH2OH, or absent when G36, G37, or G38 is N.


G34, may be H, OH, NH2,




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OCH3, CH3, CH2OH, I or absent when G35 is N. G34, may be H, OH, NH2,




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OCH3, CH3, CH2OH, or absent when G35 is N. G34, may be H, OH, NH2, OCH3, CH3, CH2OH, or absent when G35 is N.


G35, G36, G37, and G38, may each independently be C or N. G35, G36, G37, and G38, may each be N. G35, G36, G37, and G38, may each be C.


G39 may be C, CH or N. G39 may be C. G39 may be C or CH. G39 may be C or N.


G40 may be CH, or N. G40 may be N. G40 may be CH.


G41 may be NH, S, O, or CH2. G41 may be NH, S or O. G41 may be NH. G41 may be S.


G42, G43, G44, and G45, may each independently be H, OH, Br, Cl, F, I or CH3. G42, G43, G44, and G45, may each independently be H or Br. G42, G43, G44, and G45, may each independently be H, OH, Br or CH3.


G46 may be C, CH, or N. G46 may be C. G46 may be C or N. G46 may be CH or N.


G47, G48, G50, and G51, are each independently be H, OH, Br, Cl, F, I or CH3. G47, G48, G50, and G51, are each independently be H or OH. G47, G48, G50, and G51, are each independently be H, OH or CH3. G47, G48, G50, and G51, are each be H. G47, G48, G50, and G51, are each independently be OH. G49 is OH, Br, Cl, F, I or CH3. G49 is Br, Cl, F or I. G49 is OH or CH3.


G52 may be C, CH or N. G52 may be C. G52 may be C or N. G52 may be C or CH.


G53 may be CH2, NH, S or O. G53 may be NH. G53 may be CH2 or NH. G53 may be NH or O. G53 may be NH or S.


G54, G55, G56, G57, and G5, may each independently be H, OH, Br, Cl, F, I or CH3. G54, G55, G56, G57, and G5, may each independently be H, Cl or F. G54, G55, G56, G57, and G58, may each be H. G54, G55, G56, G57, and G58, may each be Cl. G54, G55, G56, G57, and G58, may each be F. G54, G55, G56, G57, and G58, may each independently be H, Br, Cl, F or CH3.


D3 may be



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D3 may be



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D3 may be



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J1 may be CH, N, CCH3, CH2, NCH3, CN═O, C═O,




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N—CH2—CH2—CH3, CH═O, N—N═O,




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NCH2C(O)OCH2CH3, N—CH2—C(O)—O—CH2—CH3, O, S or NH. J1 may be CH, N, CH2, NCH3, CN═O, C═O,




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or NH.

J1 may be CH, N, CCH3, CH2, NCH3, CN═O, C═O,




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O, S or NH. J2 may be CH, C, or N. J2 may be CH. J2 may be CH or C. J2 may be CH, or N. J3 may be C═S, C═O, NH, or CH2. J3 may be C═S. J3 may be C═S or CH2. J3 may be C═S or C═O. J3 may be C═S or NH. J4 may be CH or N. J4 may be N. J4 may be CH. J5 may be CH2, NH, S or O. J5 may be O. J5 may be CH2 or O. J5 may be NH, S or O. J5 may be S or O. J5 may be NH or O. J6, J7, J8, J9, J10, J11, J12, and J13 may each independently be H, OH, Br, Cl, F, I or CH3. J6, J7, J8, J9, J10, J11, J12, and J13 may each independently be H. J6, J7, J8, J9, J10, J11, J12, and J13 may each independently be H, OH, Br, Cl, F or CH3. J14 may be CH, C, or N. J14 may be N. J14 may be CH or N. J14 may be C or N. J15 may be C═S, C═O, NH or CH2. J15 may be CH2. J15 may be NH or CH2. J15 may be C═S or CH2. J15 may be C═O or CH2.


J16, J17, J18, J19, and J20 may each independently be H, OH, Br, CF, I,




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or CH3. J16, J17, J18, J19, and J20 may each independently be H or




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J17, J18, J19, and J20 may each independently be H, OH, Br, Cl, F,




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or CH3. J21 may be CH, C or N. J21 may be CH. J21 may be CH or N. J21 may be CH or C. J22 may be NH. J22 may be CH2. J22 may be CH2 or NH. J23 may be CH or N. J23 may be CH. J23 may be N. J24, J25, J26, and J27 may each independently be H, OH, Br, Cl, F, I or CH3. J24, J25, J26, and J27 may each independently be H. J24, J25, J26, and J27 may each independently be H, OH or CH3. J24, J25, J26, and J27 may each independently be H, OH, Br, Cl or CH3. J29 may be CH, C or N. J29 may be C. J29 may be CH or C. J29 may be C or N. J31 may be H, OH, Br, F, I, C(O)NH2, OCH3 or CH3. J31 may be H, Br, OCH3 or CH3. J31 may be H, OH, Br, Cl, F, I, C(O)NH2, OCH3 or CH3. J31 may be Cl. J31 may be H. J31 may be Br. J31 may be OCH3. J31 may be CH3. J29, J30, J32, and J33 may each independently be H, OCH3, OH, Br, Cl, F, I, C(O)NH2, CF3,




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NH2, or CH3. J29, J30, J32, and J33 may each independently be H, OH, Br, Cl, C(O)NH2, CF3 or CH3. J29, J30, J32, and J33 may each independently be H, OCH3, OH, Br, Cl, F, I, C(O)NH2, NH2, or CH3. J34 may be CH, C, or N. J34 may be C. J34 may be CH or C. J34 may be C or N. J35, J36, J37, J38, and J39 may each independently be H, OCH3, OH, Br, Cl, F, I, C(O)NH2, CF3,




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NH2, or CH3. J35, J36, J37, J38, and J39 may each independently be H, Cl or CH3. J35, J36, J37, J38, and J39 may each independently be H, OCH3, OH, Br, Cl, F, NH2 or CH3. J35, J36, J37, J38, and J39 may each be H, Cl or CH3. J35, J36, J37, J38, and J39 may each independently be H. J35, J36, J37, J38, and J39 may each independently be Cl. J35, J36, J37, J38, and J39 may each independently be CH3. J35, J36, J37, J38, and J39 may each independently be CF3. J40 may be CH, C, or N. J40 may be C. J40 may be CH or C. J40 may be C or N. J41 may be H, OH, Br, Cl, F, I, NH2, CH3 or




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J41 may be H. J41 may be H, OH, Br, Cl, F, NH2 or CH3. J42, J43, J44, J45, and J46 may each independently be H, OH, Br, Cl, F, I, NH2 or CH3. J42, J43, J44, J45, and J46 may each independently be H. J42, J43, J44, J45, and J46 may each independently be H, OH, NH2, or CH3. J42, J43, J44, J45, and J46 may each independently be H, OH, Br, Cl, NH2 or CH3. J47 may be CH, C or N. J47 may be C. J47 may be CH, C or N. J47 may be CH or C. J47 may be C or N. J48 may be S, CH2, C═O, O, or NH. J48 may be S, CH2 or NH. J48 may be S. J4 may be CH2. J48 may be NH. J49 may be CH2, C═O, S, O, or NH. J49 may be CH2 or C═O. J49 may be S, O, or NH. J49 may be CH2, C═O or NH. J49 may be CH2, C═O or S. J49 may be CH2, C═O or O. J55 may be C, or N. J55 may be C. J55 may be N. J50, J51, J52, J53, and J54, may each independently be H, OH, NH2, Br, Cl, F, I,




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OCH3, CF3, CH3 or may be absent when J50, J51, J52, J53, or J54 is N. J50, J51, J52, J53, and J54, may each independently be H, OH, Br, F, CH3 or may be absent when J50, J51, J52, J53, or J54 is N. J50, J51, J52, J53, and J54, may each be H or may be absent when J50, J51, J52, J53, or J54 is N. J50, J51, J52, J53, and J54, may each be OH or may be absent when J50, J51, J52, J53, or J54 is N. J50, J51, J52, J53, and J54, may each be Br or may be absent when J50, J51, J52, J53, or J54 is N. J50, J51, J52, J53, and J54, may each be F or may be absent when J50, J51, J52, J53, or J54 is N. J50, J51, J52, J53, and J54, may each be CH3 or may be absent when J50, J51, J52, J53, or J54 is N. J56 may be CH, C or N. J56 may be C. J56 may be CH or C. J56 may be C or N. J57 may be N or CH. J57 may be CH. J57 may be N. J58, J59, J60, J61, and J62, may each independently be H, OH, NH2, Br, Cl, F, I,




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OCH3, CF3, or CH3. J58, J59, J60, J61, and J62, may each independently be H, F or CF3. J58, J59, J60, J61, and J62, may each independently be H, OH, NH2, Br, Cl, F, I, OCH3 or CH3. J63, J64, J65, J66, and J67, may each independently be H, OH, NH2, Br, Cl, F, I,




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OCH3, CF3, or CH3. J63, J64, J65, J66, and J67, may each independently be H, F or CF3. J63, J64, J65, J66, and J67, may each independently be H, OH, NH2, Br, Cl, F, OCH3 or CH3. J63 may be CH, C, or N. J63 may be C or N. J63 may be C. J63 may be N. J64 may be CH, CH2, NH, CN═O, C═O, O, NCH3, NC(O)OCH3,




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or N. J64 may be CH, CH2, NH, CN═O, C═O, O, CCH3, NCH3, NC(O)OCH3,




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or N. J64 may be CH, CH2, NH, CN═O, C═O, O, NCH3, NC(O)OCH3,




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or N. J65 may be CH2, NH, C═O, O, S, NN═O, NCH3, NC(O)OCH3,




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J65 may be CH2, NH, C═O, O, NN═O, NCH3, NC(O)OCH3,




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J66, J67, J68, and J69 may each independently be H, OCH3, OH, Br, Cl, F, I, C(O)NH2, CF3,




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NH2, or CH3. J66, J67, J68, and J69 may each independently be H, OCH3, Br or CF3. J66, J67, J68, and J69 may each independently be H, OCH3, OH, Br, Cl, F, C(O)NH2, NH2 or CH3. J70 may be C. J70 may be CH or C. J70 may be C or N. J70 may be CH, C, or N. J71, J72, J73, and J74 may each independently be H, OCH3, OH, Br, Cl, F, I, C(O)NH2, CF3,




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NH2, or CH3. J71, J72, J73, and J74 may each independently be H, Br, CF3, or CH3. J71, J72, J73, and J74 may be H. J71, J72, J73, and J74 may be Br. J71, J72, J73, and J74 may be CF3. J71, J72, J73, and J74 may be CH3. J75 may be CH, or N. J75 may be CH.


J77 may be



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J77 may be



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One or more of D1-D3 links to at least one ring in addition to the bicyclic structure of Formula I.


In accordance with a further aspect of the invention, there is provided a compound having the structure of Formula I as described herein, but provided that the compound is not one of the compounds in TABLE 1.









TABLE 1







Known AR BF3 Interactors.









Internal
External



Number
Identifier
STRUCTURE





13312
ZINC 00298052


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13309
ZINC 01234071


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13310
ZINC 00297221


embedded image







13232
ZINC 02992016


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13050
ZINC 03365783


embedded image







13300
ZINC 00270867


embedded image







13299
ZINC 00499454


embedded image







13304
ZINC 00270887


embedded image







13258
ZINC 18191564


embedded image







9125
ZINC 30469682


embedded image







13186
ZINC 00513042


embedded image







13224
ZINC 04106386


embedded image







13250
ZINC 03149578


embedded image







13303
ZINC 00270884


embedded image







13257
ZINC 12345945


embedded image







13243
ZINC 00253227


embedded image







13424
ZINC 12346351


embedded image







6054
ZINC 08718421


embedded image







13029
ZINC 00210926


embedded image







9128
ZINC 47424036


embedded image







13216
ZINC 06025409


embedded image







13260
ZINC 49491101


embedded image







13416
ZINC 01869964


embedded image







13411
ZINC 04106386


embedded image







13214
ZINC 26472877


embedded image







13235
ZINC 01037115


embedded image







13127
ZINC 00392643


embedded image







13261
ZINC 48546225


embedded image







13215
ZINC 05504717


embedded image







13167
NSC 105329


embedded image







13206
ZINC 04962047


embedded image







13145
ZINC 34603778


embedded image







13245
ZINC 00555700


embedded image







13036
ZINC 14961821


embedded image







13166
ZINC 01723993


embedded image







13164-B
ZINC 02046058


embedded image







13254
ZINC 18191551


embedded image







13410
ZINC 04106383


embedded image







13423
ZINC 18191568


embedded image







13222
ZINC 02718340


embedded image







13247
ZINC 48090221


embedded image







13412
ZINC 02718340


embedded image







13434
ZINC 00069102


embedded image







13164-A
ZINC 02046058


embedded image







13220
ZINC 48544111


embedded image







13225
ZINC 18191568


embedded image







13436
ZINC 00068959


embedded image







13255
ZINC 18191553


embedded image







13163-A
ZINC 02043019


embedded image







13163-B
ZINC 02043019


embedded image







13256
ZINC 05848672


embedded image







13427
ZINC 00588219


embedded image







13259
ZINC 18191559


embedded image







13226
ZINC 18191571


embedded image







13562
Known see U.S. Pat. No. 6,207,679


embedded image







13566
Known see U.S. Pat. No. 6,207,679


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The compound may be selected from one or more of the active synthetic derivatives set out in TABLE 2.









TABLE 2







List of Active Synthetic AR BF3 Interactor Derivatives








Internal



Number
STRUCTURE





9040


embedded image







9034


embedded image







13551


embedded image







13550


embedded image







9026


embedded image







13544


embedded image







13561


embedded image







9028


embedded image







9027


embedded image







13538


embedded image







13559


embedded image







13512


embedded image







13542


embedded image







13524


embedded image







13508


embedded image







13530


embedded image







13503


embedded image







13502


embedded image







9037


embedded image







13543


embedded image







13516


embedded image







13505


embedded image







13522


embedded image







13548


embedded image







13525


embedded image







13532


embedded image







13511


embedded image







9043


embedded image







13509


embedded image







13510


embedded image







13540


embedded image







13560


embedded image







13536


embedded image







13556


embedded image







13504


embedded image







13549


embedded image







13558


embedded image







13535


embedded image







13500


embedded image







13552


embedded image







13534


embedded image







13537


embedded image







13554


embedded image







13541


embedded image







13521


embedded image







13506


embedded image







13567


embedded image







13568


embedded image







13570


embedded image







13569


embedded image







13571


embedded image







13573


embedded image







13574


embedded image







13576


embedded image







13577


embedded image







13579


embedded image







13580


embedded image







13582


embedded image







13585


embedded image







13587


embedded image







13589


embedded image







13591


embedded image







13592


embedded image







13593


embedded image







13594


embedded image







13595


embedded image







13597


embedded image







13600


embedded image







13601


embedded image







13602


embedded image







13603


embedded image







13606


embedded image







13607


embedded image







13610


embedded image







13611


embedded image







13612


embedded image







13613


embedded image







13614


embedded image







13618


embedded image







13619


embedded image







13621


embedded image







13622


embedded image







13624


embedded image







13625


embedded image







13626


embedded image







13627


embedded image







13628


embedded image







13629


embedded image







13630


embedded image







13633


embedded image







13634


embedded image







13639


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13640


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Alternatively, the compound may be selected from one or more of the following:




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The compound may have the structure of Formula II:




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wherein,


L1 may be H, Cl, F, Br, OH, CF3, NH2, OCH3, or CH3;


L2 may be H, Cl, F, Br, OH, NH2, OCH3, or CH3;


L3 may be H, Cl, F, Br, OH, NH2, OCH3, or CH3;


L4 may be H, Cl, F, Br, OH, NH2, C(O)NHCH3, CH2OH, OCH3, CF3, CH3,




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L5 may be H, OH, NH2, OCH3, CH2CH3, or CH3;


L6 may be H, OH, NH2, OCH3, CH2CH3, or CH3;


L7 may be H, F, Cl or Br;

L8 may be H, Cl, F, Br, OH, NH2, OCH3, or CH3;


L9 may be H, Cl, F, Br, OH, NH2, OCH3, or CH3; and


L10 may be H, Cl, F, Br, OH, NH2, I, CN, CH2CH3, CF3, OCH3,




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or CH3,

provided that the compound is not one of the following:




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The compound may be:




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The compound may be:




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The compound may have the structure of Formula III:




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wherein,


R1 is CH3, OH, OCH3, CH2CH3, or OCH2CH3;


R2 is CH3, OH, OCH3, CH2CH3, or OCH2CH3;


or R1 and R2 form




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M1 is C or N;


M2 is C or N;


Q1 is H;


Q2 is NH2, Br, Cl, H, OCH3, CH2OH, OCH2-Ph,




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OH, F, I, C(O)NH2,



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NH2, or CH3;


Q3 is NH2, Br, Cl, H, OCH3, CH2OH, OCH2-Ph,




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OH, F, I, C(O)NH2,



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NH2, or CH3;


Q4 is NH2, Br, Cl, H, OCH3, CH2OH, OCH2-Ph,




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OH, F, I, C(O)NH2,



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NH2, or CH3; and


Q5 is H, CH3, CH2CH2OH,




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OH, F, Br, Cl I, or



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The compound may be selected from one or more of the following:




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The compound may be




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The compound may be for use in the treatment of at least one indication selected from the group including: prostate cancer, breast cancer, ovarian cancer, endometrial cancer, hair loss, acne, hirsutism, ovarian cysts, polycystic ovary disease, precocious puberty, and age-related macular degeneration.


The modulating AR activity is for the treatment of at least one indication selected from the group including: prostate cancer, breast cancer, ovarian cancer, endometrial cancer, hair loss, acne, hirsutism, ovarian cysts, polycystic ovary disease, precocious puberty, and age-related macular degeneration.


The modulating AR activity may be for the treatment of prostate cancer. The mammalian cell may be a human cell. The cell may be a prostate cell. The cell may be a prostate cancer cell.


The compound may be for use in the treatment of at least one indication selected from the group consisting of: cancer, hair loss, acne, hirsutism, ovarian cysts, polycystic ovary disease, precocious puberty, and age related macular degeneration. The cancer may be AR-mediated cancer. The cancer may be selected from the group including of: prostate cancer, breast cancer, ovarian cancer, endometrial cancer and bladder cancer. The cancer may be Taxene resistant triple negative breast cancer.


In accordance with a further aspect, there is provided a pharmaceutical composition for modulating AR activity, the composition including a compound described herein, and a pharmaceutically acceptable carrier.


In accordance with a further aspect, there is provided a method of modulating AR activity, the method including (a) administering a compound described herein or a pharmaceutical composition described herein to a subject in need thereof.


In accordance with a further aspect, there is provided a method for modulating AR activity, the method including administering to a mammalian cell a compound or pharmaceutically acceptable salt thereof as described herein.


In accordance with a further aspect, there is provided a use of a compound described herein, for modulating AR activity.


In accordance with a further aspect, there is provided a use of a compound described herein, for the manufacture of a medicament for modulating AR activity.


In accordance with a further aspect, there is provided a pharmaceutical composition including a compound or pharmaceutically acceptable salt thereof described herein and a pharmaceutically acceptable excipient.


In accordance with a further aspect, there is provided a commercial package including (a) a compound described herein; and (b) instructions for the use thereof for modulating AR activity.


In accordance with a further aspect, there is provided a commercial package including (a) a pharmaceutical composition comprising a compound described herein and a pharmaceutically acceptable carrier; and (b) instructions for the use thereof for modulating AR activity.







DETAILED DESCRIPTION

The BF3 site is an attractive target for direct inhibition of the AR co-activation. In silico computational drug discovery methods were used to conduct a virtual screen of ˜4 million purchasable lead-like compounds from the ZINC database (Irwin, J. et al. Abstracts of Papers Am. Chem. Soc. (2005) 230:U1009) to identify potential BF3 binders. The in silico methods included large-scale docking, in-site rescoring and consensus voting procedures.


It will be understood by a person of skill that COOH and NR2 may include the corresponding ions, for example carboxylate ions and ammonium ions, respectively. Alternatively, where the ions are shown, a person of skill in the art will appreciate that the counter ion may also be present.


Those skilled in the art will appreciate that the point of covalent attachment of the moiety to the compounds as described herein may be, for example, and without limitation, cleaved under specified conditions. Specified conditions may include, for example, and without limitation, in vivo enzymatic or non-enzymatic means. Cleavage of the moiety may occur, for example, and without limitation, spontaneously, or it may be catalyzed, induced by another agent, or a change in a physical parameter or environmental parameter, for example, an enzyme, light, acid, temperature or pH. The moiety may be, for example, and without limitation, a protecting group that acts to mask a functional group, a group that acts as a substrate for one or more active or passive transport mechanisms, or a group that acts to impart or enhance a property of the compound, for example, solubility, bioavailability or localization.


In some embodiments, compounds of Formula I or Formula II above may be used for systemic treatment of at least one indication selected from the group consisting of: prostate cancer, breast cancer, ovarian cancer, endometrial cancer, hair loss, acne, hirsutism, ovarian cysts, polycystic ovary disease, precocious puberty and age-related macular degeneration. In some embodiments compounds of Formula I or Formula II may be used in the preparation of a medicament or a composition for systemic treatment of an indication described herein. In some embodiments, methods of systemically treating any of the indications described herein are also provided.


Compounds as described herein may be in the free form or in the form of a salt thereof. In some embodiment, compounds as described herein may be in the form of a pharmaceutically acceptable salt, which are known in the art (Berge S. M. et al., J. Pharm. Sci. (1977) 66(1):1-19). Pharmaceutically acceptable salt as used herein includes, for example, salts that have the desired pharmacological activity of the parent compound (salts which retain the biological effectiveness and/or properties of the parent compound and which are not biologically and/or otherwise undesirable). Compounds as described herein having one or more functional groups capable of forming a salt may be, for example, formed as a pharmaceutically acceptable salt. Compounds containing one or more basic functional groups may be capable of forming a pharmaceutically acceptable salt with, for example, a pharmaceutically acceptable organic or inorganic acid. Pharmaceutically acceptable salts may be derived from, for example, and without limitation, acetic acid, adipic acid, alginic acid, aspartic acid, ascorbic acid, benzoic acid, benzenesulfonic acid, butyric acid, cinnamic acid, citric acid, camphoric acid, camphorsulfonic acid, cyclopentanepropionic acid, diethylacetic acid, digluconic acid, dodecylsulfonic acid, ethanesulfonic acid, formic acid, fumaric acid, glucoheptanoic acid, gluconic acid, glycerophosphoric acid, glycolic acid, hemisulfonic acid, heptanoic acid, hexanoic acid, hydrochloric acid, hydrobromic acid, hydriodic acid, 2-hydroxyethanesulfonic acid, isonicotinic acid, lactic acid, malic acid, maleic acid, malonic acid, mandelic acid, methanesulfonic acid, 2-napthalenesulfonic acid, naphthalenedisulphonic acid, p-toluenesulfonic acid, nicotinic acid, nitric acid, oxalic acid, pamoic acid, pectinic acid, 3-phenylpropionic acid, phosphoric acid, picric acid, pimelic acid, pivalic acid, propionic acid, pyruvic acid, salicylic acid, succinic acid, sulfuric acid, sulfamic acid, tartaric acid, thiocyanic acid or undecanoic acid. Compounds containing one or more acidic functional groups may be capable of forming pharmaceutically acceptable salts with a pharmaceutically acceptable base, for example, and without limitation, inorganic bases based on alkaline metals or alkaline earth metals or organic bases such as primary amine compounds, secondary amine compounds, tertiary amine compounds, quaternary amine compounds, substituted amines, naturally occurring substituted amines, cyclic amines or basic ion-exchange resins. Pharmaceutically acceptable salts may be derived from, for example, and without limitation, a hydroxide, carbonate, or bicarbonate of a pharmaceutically acceptable metal cation such as ammonium, sodium, potassium, lithium, calcium, magnesium, iron, zinc, copper, manganese or aluminum, ammonia, benzathine, meglumine, methylamine, dimethylamine, trimethylamine, ethylamine, diethylamine, triethylamine, isopropylamine, tripropylamine, tributylamine, ethanolamine, diethanolamine, 2-dimethylaminoethanol, 2-diethylaminoethanol, dicyclohexylamine, lysine, arginine, histidine, caffeine, hydrabamine, choline, betaine, ethylenediamine, glucosamine, glucamine, methylglucamine, theobromine, purines, piperazine, piperidine, procaine, N-ethylpiperidine, theobromine, tetramethylammonium compounds, tetraethylammonium compounds, pyridine, N,N-dimethylaniline, N-methylpiperidine, morpholine, N-methylmorpholine, N-ethylmorpholine, dicyclohexylamine, dibenzylamine, N,N-dibenzylphenethylamine, 1-ephenamine, N,N′-dibenzylethylenediamine or polyamine resins. In some embodiments, compounds as described herein may contain both acidic and basic groups and may be in the form of inner salts or zwitterions, for example, and without limitation, betaines. Salts as described herein may be prepared by conventional processes known to a person skilled in the art, for example, and without limitation, by reacting the free form with an organic acid or inorganic acid or base, or by anion exchange or cation exchange from other salts. Those skilled in the art will appreciate that preparation of salts may occur in situ during isolation and purification of the compounds or preparation of salts may occur by separately reacting an isolated and purified compound.


In some embodiments, compounds and all different forms thereof (e.g. free forms, salts, polymorphs, isomeric forms) as described herein may be in the solvent addition form, for example, solvates. Solvates contain either stoichiometric or non-stoichiometric amounts of a solvent in physical association the compound or salt thereof. The solvent may be, for example, and without limitation, a pharmaceutically acceptable solvent. For example, hydrates are formed when the solvent is water or alcoholates are formed when the solvent is an alcohol.


In some embodiments, compounds and all different forms thereof (e.g. free forms, salts, solvates, isomeric forms) as described herein may include crystalline and amorphous forms, for example, polymorphs, pseudopolymorphs, conformational polymorphs, amorphous forms, or a combination thereof. Polymorphs include different crystal packing arrangements of the same elemental composition of a compound. Polymorphs usually have different X-ray diffraction patterns, infrared spectra, melting points, density, hardness, crystal shape, optical and electrical properties, stability and/or solubility. Those skilled in the art will appreciate that various factors including recrystallization solvent, rate of crystallization and storage temperature may cause a single crystal form to dominate.


In some embodiments, compounds and all different forms thereof (e.g. free forms, salts, solvates, polymorphs) as described herein include isomers such as geometrical isomers, optical isomers based on asymmetric carbon, stereoisomers, tautomers, individual enantiomers, individual diastereomers, racemates, diastereomeric mixtures and combinations thereof, and are not limited by the description of the formula illustrated for the sake of convenience.


In some embodiments, pharmaceutical compositions as described herein may comprise a salt of such a compound, preferably a pharmaceutically or physiologically acceptable salt. Pharmaceutical preparations will typically comprise one or more carriers, excipients or diluents acceptable for the mode of administration of the preparation, be it by injection, inhalation, topical administration, lavage, or other modes suitable for the selected treatment. Suitable carriers, excipients or diluents (used interchangeably herein) are those known in the art for use in such modes of administration.


Suitable pharmaceutical compositions may be formulated by means known in the art and their mode of administration and dose determined by the skilled practitioner. For parenteral administration, a compound may be dissolved in sterile water or saline or a pharmaceutically acceptable vehicle used for administration of non-water soluble compounds such as those used for vitamin K. For enteral administration, the compound may be administered in a tablet, capsule or dissolved in liquid form. The tablet or capsule may be enteric coated, or in a formulation for sustained release. Many suitable formulations are known, including, polymeric or protein microparticles encapsulating a compound to be released, ointments, pastes, gels, hydrogels, or solutions which can be used topically or locally to administer a compound. A sustained release patch or implant may be employed to provide release over a prolonged period of time. Many techniques known to one of skill in the art are described in Remington: the Science & Practice of Pharmacy by Alfonso Gennaro, 20th ed., Lippencott Williams & Wilkins, (2000). Formulations for parenteral administration may, for example, contain excipients, polyalkylene glycols such as polyethylene glycol, oils of vegetable origin, or hydrogenated naphthalenes. Biocompatible, biodegradable lactide polymer, lactide/glycolide copolymer, or polyoxyethylene-polyoxypropylene copolymers may be used to control the release of the compounds. Other potentially useful parenteral delivery systems for modulatory compounds include ethylene-vinyl acetate copolymer particles, osmotic pumps, implantable infusion systems, and liposomes. Formulations for inhalation may contain excipients, for example, lactose, or may be aqueous solutions containing, for example, polyoxyethylene-9-lauryl ether, glycocholate and deoxycholate, or may be oily solutions for administration in the form of nasal drops, or as a gel.


Compounds or pharmaceutical compositions as described herein or for use as described herein may be administered by means of a medical device or appliance such as an implant, graft, prosthesis, stent, etc. Also, implants may be devised which are intended to contain and release such compounds or compositions. An example would be an implant made of a polymeric material adapted to release the compound over a period of time.


An “effective amount” of a pharmaceutical composition as described herein includes a therapeutically effective amount or a prophylactically effective amount. A “therapeutically effective amount” refers to an amount effective, at dosages and for periods of time necessary, to achieve the desired therapeutic result, such as reduced tumor size, increased life span or increased life expectancy. A therapeutically effective amount of a compound may vary according to factors such as the disease state, age, sex, and weight of the subject, and the ability of the compound to elicit a desired response in the subject. Dosage regimens may be adjusted to provide the optimum therapeutic response. A therapeutically effective amount is also one in which any toxic or detrimental effects of the compound are outweighed by the therapeutically beneficial effects. A “prophylactically effective amount” refers to an amount effective, at dosages and for periods of time necessary, to achieve the desired prophylactic result, such as smaller tumors, increased life span, increased life expectancy or prevention of the progression of prostate cancer to an androgen-independent form. Typically, a prophylactic dose is used in subjects prior to or at an earlier stage of disease, so that a prophylactically effective amount may be less than a therapeutically effective amount.


It is to be noted that dosage values may vary with the severity of the condition to be alleviated. For any particular subject, specific dosage regimens may be adjusted over time according to the individual need and the professional judgment of the person administering or supervising the administration of the compositions. Dosage ranges set forth herein are exemplary only and do not limit the dosage ranges that may be selected by medical practitioners. The amount of active compound(s) in the composition may vary according to factors such as the disease state, age, sex, and weight of the subject. Dosage regimens may be adjusted to provide the optimum therapeutic response. For example, a single bolus may be administered, several divided doses may be administered over time or the dose may be proportionally reduced or increased as indicated by the exigencies of the therapeutic situation. It may be advantageous to formulate parenteral compositions in dosage unit form for ease of administration and uniformity of dosage.


In some embodiments, compounds and all different forms thereof as described herein may be used, for example, and without limitation, in combination with other treatment methods for at least one indication selected from the group consisting of: prostate cancer, breast cancer, ovarian cancer, endometrial cancer, hair loss, acne, hirsutism, ovarian cysts, polycystic ovary disease, precocious puberty and age-related macular degeneration. For example, compounds and all their different forms as described herein may be used as neoadjuvant (prior), adjunctive (during), and/or adjuvant (after) therapy with surgery, radiation (brachytherapy or external beam), or other therapies (eg. HIFU).


In general, compounds as described herein should be used without causing substantial toxicity. Toxicity of the compounds as described herein can be determined using standard techniques, for example, by testing in cell cultures or experimental animals and determining the therapeutic index, i.e., the ratio between the LD50 (the dose lethal to 50% of the population) and the LD100 (the dose lethal to 100% of the population). In some circumstances however, such as in severe disease conditions, it may be appropriate to administer substantial excesses of the compositions. Some compounds as described herein may be toxic at some concentrations. Titration studies may be used to determine toxic and non-toxic concentrations. Toxicity may be evaluated by examining a particular compound's or composition's specificity across cell lines using PC3 cells as a negative control that do not express AR. Animal studies may be used to provide an indication if the compound has any effects on other tissues. Systemic therapy that targets the AR will not likely cause major problems to other tissues since anti-androgens and androgen insensitivity syndrome are not fatal.


Compounds as described herein may be administered to a subject. As used herein, a “subject” may be a human, non-human primate, rat, mouse, cow, horse, pig, sheep, goat, dog, cat, etc. The subject may be suspected of having or at risk for having a cancer, such as prostate cancer, breast cancer, ovarian cancer or endometrial cancer, or suspected of having or at risk for having acne, hirsutism, alopecia, benign prostatic hyperplasia, ovarian cysts, polycystic ovary disease, precocious puberty, or age-related macular degeneration. Diagnostic methods for various cancers, such as prostate cancer, breast cancer, ovarian cancer or endometrial cancer, and diagnostic methods for acne, hirsutism, alopecia, benign prostatic hyperplasia, ovarian cysts, polycystic ovary disease, precocious puberty, or age-related macular degeneration and the clinical delineation of cancer, such as prostate cancer, breast cancer, ovarian cancer or endometrial cancer, diagnoses and the clinical delineation of acne, hirsutism, alopecia, benign prostatic hyperplasia, ovarian cysts, polycystic ovary disease, precocious puberty, or age-related macular degeneration are known to those of ordinary skill in the art.


Definitions used include ligand-dependent activation of the androgen receptor (AR) by androgens such as dihydrotestosterone (DHT) or the synthetic androgen (R1881) used for research purposes. Ligand-independent activation of the AR refers to transactivation of the AR in the absence of androgen (ligand) by, for example, stimulation of the cAMP-dependent protein kinase (PKA) pathway with forskolin (FSK).


Some compounds and compositions as described herein may interfere with a mechanism specific to ligand-dependent activation (e.g., accessibility of the ligand binding domain (LBD) to androgen) or to ligand-independent activation of the AR.


Various alternative embodiments and examples of the invention are described herein. These embodiments and examples are illustrative and should not be construed as limiting the scope of the invention.


Materials and Methods
In Silico Screening

Ten million commercially available compounds from the ZINC12.0 structural libraries (Irwin, J. J. and Shoichet, B. K. ZINC—a free database of commercially available compounds for virtual screening. J Chem Inf Model 2005, 45, 177-182) were imported into a molecular database using Molecular Operating Environment (MOE) version 2007.09 (MOE, Chemical Computing Group, Inc., 2008, www.chemcomp.com). These structures were energy minimized using an MMFF94x force field, exported in SD format and rigidly docked into the BF3 site of the protein structures 4HLW with Glide software (Friesner, R. A. et al. Glide: a new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy. J Med Chem. 2004, 25, 739-49). About 2 million molecules that had a GlideScore<−5.0 were then re-docked into the same BF3 binding cavity using the electronic high-throughput screening (eHiTS) docking module (Zsoldos, Z. et al. eHiTS: a new fast, exhaustive flexible ligand docking system. J Mol Graph Model 2007, 26, 198-212). From this, 500,000 structures with eHiTS docking scores <−3.0 threshold were identified. They were scored by the LigX™ module of the MOE to account for the receptor/ligand flexibility. The pKi binding affinity was scored after energy minimization to select the ligands that showed the best binding characteristics defined mainly by the energy of hydrogen bonds and hydrophobic interactions. The virtual hits were scored using Molecular Mechanics, the Generalized Born model and Solvent Accessibility (MM-GB/SA) method with OPLS_2005 and GB/SA in MacroModel™ to calculate the free energies of the optimal chemical poses (Maestro, Schrodinger, LLC, New York, N.Y., 2008. www.schrodinger.com). The root mean square deviation (RMSD) was calculated between the Glide poses and the eHiTS poses to evaluate the docking consistency and thus to establish the most probable binding pose for a given ligand. Finally, very large and very small molecules were penalized based on a heavy atom count.


With this information, a cumulative scoring of five different predicted parameters (RMSD, heavy atoms count, LigX, Macromodel, pKi) was generated where each molecule receive a binary 1.0 score for every ‘top 10% appearance’. The final cumulative vote (with the maximum possible value of 5) was then used to rank the training set entries. Based on the cumulative score 5000 compounds were selected and subjected to visual inspection. After this final selection step 200 compounds were selected out of which 150 chemical substances could be readily purchased in sufficient purity and quantity.


General Synthesis and Characterization of Compounds
Exemplary Scheme 1: Synthesis of Compound 13163.



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At 0° C., a solution of para-toluenesulfonic acid (13.4 g, 0.55 eq, 70.4 mmol) in acetonitrile (150 mL) was added drop-wise over 1 h to a solution of indole (15 g, 1.0 eq, 128.0 mmol) in acetonitrile (500 mL). The mixture was kept for additional 6 h at 0° C. The subsequent precipitate was filtered (at 0° C.) and washed with acetonitrile (three times). The precipitate was neutralized with saturated NaHCO3 solution and extracted with AcOEt (3×100 mL). The organic extracts were combined, washed with brine, dried over Na2SO4; filtered and concentrated under reduced pressure. Any purification was needed and the crude was transformed in corresponding hydrochloride with HCl2 M solution in ether and the precipitate salt was filtered to afford 14.8 g of the white solid (54.7 mmol, 85%).


Analysis

M.p.=169-170° C.


tR (HPLC)=3.01 min


MS (ESI+) m/z=235.12 [(M+H)+]


HRMS (ESI+): calculated for C16H15N2, m/z=235.1230; found, 235.1237; calculated for C16H14N2Na, m/z=257.1049; found, 257.1058



1H NMR (400 MHz, DMSO-d6): δ (ppm)=11.45 (s, 1H, H12), 7.77 (d, J=8.0 Hz, 1H, H18), 7.68 (d, J=2.6 Hz, 1H, H11), 7.58-7.50 (m, 1H, H6), 7.45 (d, J=8.4 Hz, 1H, H15), 7.43-7.38 (m, 4H, H1,2), 7.35-7.33 (m, 1H, H3), 7.17 (ddd, J=8.2, 7.1, 1.1 Hz, 1H, H16), 7.07 (ddd, J=8.0, 7.1, 1.0 Hz, 1H, H17), 5.58 (t, J=8.7 Hz, 1H, H18), 3.67 (d, J=8.7 Hz, 2H, H9).



13C NMR (101 MHz, DMSO-d6): δ (ppm)=137.96 (C4-arom.), 137.00 (C13-arom.), 135.72 (C5-arom.), 128.74 (C1H-arom.), 128.50 (C2H-arom.), 126.36 (C14-arom.), 126.11 (C6H-arom.), 125.72 (C11H-arom.), 122.31 (C16H-arom.), 119.69 (C17H-arom.), 119.48 (C18H-arom.), 119.38 (C3H-arom.), 112.30 (C15H-arom.), 110.24 (C10-arom.), 56.55 (C8H), 35.37 (C9H2).


General Synthesis Methods


1H and 13C NMR spectra (COSY, 1H/13C 2D-correlations) were recorded with Bruker Avance III™ 400 MHz. Processing of the spectra was performed with MestRec™ software and data are reported as follows: chemical shifts (6) in parts per million, coupling constants (J) in hertz (Hz). The high-resolution mass spectra were recorded in positive ion-mode with an ESI ion source on an Agilent™ Time-of-Flight LC/MS mass spectrometer. HPLC analyses and purity of >95% were performed by analytical reverse-phase HPLC with a Agilent™ instrument with variable detector using column Agilent Zorbax 4.6×5 mm, Sum; flow: 2.0 mL·min−1, H2O (0.1% FA)/CH3CN (0.1% FA), gradient 2-98% (6 min) and 98% (0.3 min). Melting points were determined with a Fischer-Jonhs.


Analytical Methods:


1H and 13C NMR spectra (COSY, 1H/13C 2D-correlations) were recorded with Bruker Avance III™ 400 MHz. Processing of the spectra was performed with MestRec™ software and data are reported as follows: chemical shifts (6) in parts per million, coupling constants (J) in hertz (Hz). The high-resolution mass spectra were recorded in positive ion-mode with an ESI ion source on an Agilent™ Time-of-Flight LC/MS mass spectrometer. HPLC analyses and purity of >95% were performed by analytical reverse-phase HPLC with a Agilent™ instrument with variable detector using column Agilent Zorbax 4.6×5 mm, Sum; flow: 2.0 mL·min−1, H2O (0.1% FA)/CH3CN (0.1% FA), gradient 2-98% (6 min) and 98% (0.3 min).


Dimethyl- & Cyclohexyl-Hydroindole Moiety
General Procedure 1

Phenylhydrazine (1.0 eq) aldehyde (isobutyraldehyde or cyclohexanecarboxaldehyde) (1.0 eq) were diluted in AcOH (0.1 M). The mixture was heated at 65° C. for 2 h (until complete conversion). Reaction mixture containing imine intermediate was allowed to reach r.t. and indole (1.0 eq) was added to the mixture which was stirred additional 2 h at r.t. (until complete conversion). Acetic acid was removed under vacuo. Then, the residue was poured with H2O and neutralized at pH 7 with sat. NaHCO3 solution. The aqueous layer was extracted with AcOEt (×3) and organic layers were combined, washed with brine, dried over Na2SO4 and evaporated under reduced pressure. Then, crude was purified by automated combi-flash to afford the good compound.


General Procedure 2

Benzyloxy compound (1.0 eq) was dissolved in mixture of MeOH (0.05 M) and the system was purged with vacuum/N2 (×3). Then, Pd/C (20% w/w) was added to the mixture and purged again with vacuum/H2 and put under H2 atmosphere. The reaction was stirred overnight at r.t. under H2 atmosphere. The reaction mixture was filtered on a plug of Celite which was washed with MeOH. The filtrate was concentrated under reduced pressure and the residue was purified by combi-flash to afford the good compound.


General Procedure 3

Imine compound (1.0 eq) was dissolved in AcOH (0.1 M) and the system was put under argon atmosphere. Then, NaBH3CN (1.1 eq) was added quickly. Then, the reaction was stirred at r.t. After overnight, the reaction mixture was concentrated and the crude was quenched with H2O. Aqueous layer was neutralized with saturated NaHCO3 solution until pH 7 and extracted with AcOEt (×2). The combined organic layers were washed with brine, dried over Na2SO4 and rotary evaporated. The crude was purified by automated combi-flash to afford the good compound.


General Procedure 4

From ester compound (1.0 eq) was diluted in mixture of MeOH/Acetone (1:3, 0.1 M). The mixture was stirred and a solution of LiOH (2.0 eq) in H2O (0.85 M) was added drop-wise over 5 min. Then, the mixture was stirred overnight at r.t. The reaction mixture was diluted in a mixture of Et2O and H2O and the aqueous phase was washed and then acidified with concentrated HCl solution until pH 3. The aqueous layer was extracted with Et2O (×2). The combined organic layers were washed with brine, dried over Na2SO4, filtered and concentrated under reduced pressure to give pure product.


General Procedure 5

A dried vessel was charged with LiAlH4 (4.0 eq), enclosed with condenser and rubber cap and put under argon atmosphere. Then, carboxylic acid (1.0 eq) was dissolved in anhydrous THE (0.28 M) and was added in system which was stirred 2 h at 70° C. The excess of LiAlH4 was destroyed by adding AcOEt drop-wise (exothermic reaction) and then by adding H2O. Aqueous saturated NH4Cl solution was added and the whole was extracted with AcOEt (×2). The combined organic layers were washed with H2O and brine, dried over Na2SO4, filtered and concentrated under reduced pressure. The crude was purified by automated combi-flash to afford the good compound.


General Procedure 6

Phenylhydrazine (1.0 eq) and isobutyraldehyde (1.0 eq) were diluted in AcOH (0.1 M). The mixture was heated at 65° C. for 2 h (until complete conversion). Reaction mixture containing imine intermediate was allowed to reach r.t. Acetic acid was removed under vacuo. The residue was poured with H2O and neutralized at pH 7 with sat. NaHCO3 solution. The aqueous layer was extracted with AcOEt (×3) and organic layers were combined, washed with brine, dried over Na2SO4 and evaporated under reduced pressure. Then, residue corresponding to imine intermediate was diluted in ACN (0.5 M). Azaindole (0.9 eq) and ZnCl2 (0.9 eq) were introduced in microwave vessel. The mixture was stirred and heated by microwave 3 h at 120° C. The resulting crystals (after avernight at r.t.) was filtered and washed with 1 N aqueous NaOH solution (50 mL) and extracted with AcOEt (×2). The organic layers were combined, washed with brine, dried over Na2SO4 and concentrated under reduced pressure to provide pure compound.


Dimethyl-Hydroindole Moiety


3-(3,3-dimethylindolin-2-yl)-5-methyl-1H-indole (Procedure 1)
















VPC Number
LabBook Code
✓ IC50 (eGFP) = 1.5


13 535
CA 2-36 F9-15 (yield = 63%)
✓ IC50 (PSA) = 1.87













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✓ tR (HPLC) = 4.07 min      ✓ MS (ESI+) m/z = 277.1719              [(M + H)+] ✓ HRMS (ESI+): calculated for C19H21N2O, m/z = 277.1699; found, 277.1708 ✓ 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.83 (s, 1H, H14), 7.33 (d, J = 0.6 Hz, 1H, H20), 7.26 (d, J = 2.0 Hz, H13), 7.25 (d, J = 8.0 Hz, 1H, H17), 7.01 (d, J = 7.2 Hz, 1H, H6), 6.97 (td, J = 7.6, 1.3 Hz, 1H, H2), 6.88 (dd, J = 8.3, 1.5 Hz, 1H, H18), 6.60 (td, J = 7.6, 1.2 Hz, 1H, H1), 6.59 (d, J = 7.6 Hz, 1H, H3), 5.82 (d, J = 2.4 Hz, 1H, H7), 4.76 (d, J = 2.2 Hz, 1H, H8), 2.33 (s, 3H, H21), 1.39 (s, 3H, H10), 0.74 (s, 3H, H11). ✓ 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 150.99 (C4-arom.), 138.68 (C5-



arom.), 135.33 (C15-arom.), 127.54 (C19-arom.), 127.29 (C2H-arom.), 127.01 (C16-



arom.), 124.09 (C13H-arom.), 122.80 (C18H-arom.), 122.45 (C6H-arom.), 119.77



(C20H-arom.), 117.53 (C1H-arom.), 113.64 (C12-arom.), 111.60 (C17H-arom.),



108.85 (C3H-arom.), 68.17 (C8H), 45.20 (C9), 27.15 (C10H3), 25.01 (C11H3), 21.87



(C21H3).









3-(3,3-dimethylindolin-2-yl)-5-methoxy-1H-indole (Procedure 1)
















VPC Number
LabBook Code
✓ IC50 (eGFP) = 2.2


13 536
CA 2-38 F10-19 (yield = 46%)
✓ IC50 (PSA) = 2.52













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✓ tR (HPLC) = 3.82 min    ✓ MS (ESI+) m/z = 293.1668               [(M + H)+] ✓ HRMS (ESI+): calculated for C19H21N2O, m/z = 293.1648; found, 293.1654 ✓ 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.79 (s, 1H, H14), 7.27 (d, J = 2.5 Hz, 1H, H13), 7.24 (d, J = 8.8 Hz, 1H, H17), 7.02 (br d, J = 7.2 Hz, 1H, H6), 6.97 (td, J = 7.6, 1.3 Hz, 1H, H2), 6.88 (d, J = 2.4 Hz, 1H, H20), 6.70 (dd, J = 8.8, 2.4 Hz, 1H, H18), 6.61 (td, J = 7.6, 1.2 Hz, 1H, H1), 6.59 (d, J = 7.6 Hz, 1H, H3), 5.82 (d, J = 2.0 Hz, 1H, H7), 4.73 (d, J = 1.9 Hz, 1H, H8), 3.62 (s, 3H, H22), 1.38 (s, 3H, H10), 0.78 (s, 3H, H11). ✓ 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 153.22 (C19-arom.), 151.10 (C4- arom.), 138.59 (C5-arom.), 132.18 (C15-arom.), 127.37 (C2H-arom.), 127.36



(C16-arom.), 124.83 (C13H-arom.), 122.32 (C6H-arom.), 117.51 (C1H-arom.),



114.38 (C12-arom.), 112.44 (C17H-arom.), 111.21 (C18-arom.), 108.72



(C3H-arom.), 102.31 (C20H-arom.), 68.27 (C8H), 55.63 (C22H3), 45.21 (C9),



27.73 (C10H3) 24.58 (C11H3).









3-(3,3-dimethylindolin-2-yl)-5-amine-H-indole (Procedure 1)
















VPC Number
LabBook Code
✓ IC50 (eGFP) = 7.7


13 538
CA 2-47 F7-17 (yield = 45%)
✓ IC50 (PSA) = No Data













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✓ tR (HPLC) = 2.56 min    ✓ MS (ESI+) m/z = 278.1668              [(M + H)+] ✓ HRMS (ESI+): calculated for C18H20N3, m/z = 278.1652; found, 278.1657 ✓ 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.53 (d, J = 1.6 Hz, 1H, H14), 7.14 (d, J = 2.4 Hz, 1H, H13), 7.08 (d, J = 8.4 Hz, 1H, H17), 7.00 (dd, J = 7.2, 0.7 Hz, 1H, H6) 6.95 (td, J = 7.6, 1.3 Hz, 1H, H2), 6.86 (d, J = 2.0 Hz, 1H, H20), 6.60 (td, J = 7.6, 0.8 Hz, 1H, H2,) 6.57 (d, J = 7.6 Hz, 1H, H3), 6.51 (dd, J = 8.5, 2.0 Hz, 1H, H18), 5.78 (s, 1H, H7), 4.86 (s 2H, H21), 4.69 (s, 1H, H8), 1.39 (s, 3H, H10), 0.75 (s, 3H, H11). ✓ 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 150.97 (C4-arom.), 138.81



(C5-arom.), 140.00 (C19-arom.), 131.08 (C15-arom.), 128.25 (C16-arom.),



127.21 (C2H-arom.), 123.86 (C13H-arom.), 122.47 (C6H-arom.), 117.47



(C1H-arom.), 112.50 (C12-arom.), 112.36 (C18H-arom.), 111.97



(C17-arom.), 108.86 (C3H-arom.), 104.09 (C20H-arom.), 68.29 (C8H),



45.21 (C9), 27.00 (C10H3, 25.15 (C11H3).









3-(3,3-dimethylindolin-2-yl)-6-(benzyloxy)-1H-indole (Procedure 1)
















VPC Number
LabBook Code
✓ IC50 (eGFP) = 11.4


13 544
CA 2-54 Precipitate (yield = 53%)
✓ IC50 (PSA) = No Data













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✓ tR (HPLC) = 4.60 min      ✓ MS (ESI+) m/z = 369.1981                [(M + H)+] ✓ HRMS (ESI+): calculated for C25H25N2O, m/z = 369.1961; found, 369.1979 ✓ 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.77 (s, 1H, H14), 7.47 (d, J = 7.1 Hz, 2H, H24, 28), 7.42-7.38 (m, 3H, H20, 25, 27), 7.35-7.31 (m, 1H, H26) 7.18 (d, J = 2.1 Hz, 1H, H13), 6.99 (d, J = 6.8 Hz, 1H, H6), 6.98-6.94 (m, 2H, H2, 17), 6.69 (dd, J = 8.7, 2.3 Hz, 1H, H19), 6.63-6.55 (m, 2H, H1, 3,), 5.83 (d, J = 2.3 Hz, 1H, H7), 5.11 (s, 2H, H22),



4.73 (d, J = 2.2 Hz, 1H, H8), 1.37 (s, 3H, H10), 0.73 (s, 3H, H11).



13C NMR (101 MHz, DMSO-d6): δ (ppm) = 154.69 (C18-arom.), 150.96



(C4-arom.), 138.64 (C5-arom.), 138.14 (C23-arom.), 137.52 (C15-arom.),



128.84 (C25, 27H-arom.), 128.08 (C26H-arom.), 127.96 (C24, 28H-arom.),



127.32 (C2H-arom.), 122.77 (C13H-arom.), 122.41 (C6H-arom.),



121.88 (C16-arom.), 120.79 (C20H-arom.), 117.54 (C1H-arom.), 114.22



(C12-arom.), 109.60 (C19H-arom.), 108.83 (C3H-arom.), 96.33



(C17H-arom.), 69.92 (C22H2), 68.20 (C8H, 45.15 (C9), 27.16 (C10H3),



24.91 (C11H3).









3-(3,3-dimethylindolin-2-yl)-7-(benzyloxy)-1H-indole (Procedure 1)
















VPC Number
LabBook Code
✓ IC50 (eGFP) = 3.7


13 543
CA 2-55 F7-10 (yield = 61%)
✓ IC50 (PSA) = 3.19













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✓ tR (HPLC) = 4.67 min    ✓ MS (ESI+) m/z = 369.1976              [(M + H)+] ✓ HRMS (ESI+): calculated for C25H25N2O, m/z = 369.1961; found, 369.1957 ✓ 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.10 (d, J = 1.6 Hz, 1H, H14), 7.58 (d, J = 7.8 Hz, 2H, H24, 28), 7.46-7.39 (m, 2H, H25, 27), 7.38-7.31 (m, 1H, H26) 7.22 (d, J = 2.4 Hz, 1H, H13), 7.15 (d, J = 8.0 Hz, 1H, H20), 7.00 (d, J = 7.0 Hz, 1H, H6), 6.96 (td, J = 7.6, 1.3 Hz, 1H, H2), 6.85 (t, J = 7.8 Hz, 1H, H19), 6.73 (d, J = 7.6 Hz,



1H, H18, 6.62-6.56 (m, 2H, H1, 3), 5.85 (d, J = 2.4 Hz, 1H, H7),



5.26 (s, 2H, H22), 4.77 (d, J = 2.2 Hz, 1H, H8), 1.38 (s, 3H, H10),



0.74 (s, 3H, H11).



13C NMR (101 MHz, DMSO-d6): δ (ppm) = 150.95 (C4-arom.), 145.54



(C17-arom.), 138.61 (C5-arom.), 137.89 (C23-arom.), 128.97 (C16-arom.),



128.83 (C25, 27H-arom.), 128.17 (C26H-arom.), 128.01 (C24, 28H-arom.),



127.32 (C2H-arom.), 127.15 (C15-arom.), 123.71 (C13H-arom.), 122.43



(C6H-arom.), 119.23 (C19H-arom.), 117.57 (C1H-arom.), 114.81



(C12-arom.), 113.19 (C20H-arom.), 108.83 (C3H-arom.), 103.08



(C18H-arom.), 69.56 (C22H2), 68.03 (C8H), 45.20 (C9), 27.19 (C10H3),



24.89 (C11H3).









3-(3,3-dimethylindolin-2-yl)-6-hydroxy-1H-indole (Procedure 2)
















VPC Number
LabBook Code
✓ IC50 (eGFP) = 5.7


13 542
CA 2-61 F3-8 (yield = 62%)
✓ IC50 (PSA) = No Data













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✓ tR (HPLC) = 3.25 min   ✓ MS (ESI+) m/z = 279.1485             [(M + H)+] ✓ HRMS (ESI+): calculated for C18H19N2O, m/z = 279.1492; found, 279.1485 ✓ 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.55 (s, 1H, H14), 8.84 (s, 1H, H21), 7.28 (d, J = 8.5 Hz, 1H, H20), 7.08 (d, J = 2.0 Hz, 1H, H13), 6.99 (d, J = 6.8 Hz, 1H, H6), 6.95 (td, J = 7.6, 1.3 Hz, 1H, H2), 6.71 (d, J = 2.0 Hz, 1H,H17), 6.62-6.54 (m, 2H, H1, 3), 6.47 (dd, J = 8.6, 2.2 Hz, 1H, H19), 5.79 (d, J = 2.4 Hz, 1H, H7) 4.70 (d, J = 2,1 Hz, 1H, H8),



1.37 (s, 3H, H10), 0.73 (s, 3H, H11).



13C NMR (101 MHz, DMSO-d6): δ (ppm) = 153.20 (C18-arom.), 150.98



(C4-arom.), 138.70 (C5-arom.), 138.04 (C15-arom.), 127.28 (C2H-arom.),



122.40 (C6H-arom.), 121.88 (C13H-arom.), 120.84 (C16-arom.), 120.50



(C20H-arom.), 117.48 (C1H-arom.), 114.08 (C12-arom.), 109.39



(C19H-arom.), 108.78 (C3H-arom.), 96.92 (C17H-arom.), 68.27 (C8H), 45.10



(C9), 27.17 (C10H3), 24.90 (C11H3).









3-(3,3-dimethylindolin-2-yl)-7-hydroxy-1H-indole (Procedure 2)
















VPC Number
LabBook Code
✓ IC50 (eGFP) = 0.5


13 541
CA 2-62 F6-11 (yield = 37%)
✓ IC50 (PSA) = 0.94













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✓ tR (HPLC) = 3.51 min    ✓ MS (ESI+) m/z = 279.1525              [(M + H)+] ✓ HRMS (ESI+): calculated for C18H19N2O, m/z = 279.1492; found, 279.1496 ✓ 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.76 (s, 1H, H14), 9.46 (s, 1H, H21), 7.19 (d, J = 2.4 Hz, 1H, H13), 7.02-6.98 (m, 2H, H6, 20), 6.96 (td, J = 7.6, 1.3 Hz, 1H, H2), 6.73 (t, J = 7.7 Hz, 1H, H19), 6.62-6.55 (m, 2H, H1, 3), 6.48 (dd, J = 7.5, 0.6 Hz, 1H, H18), 5.82



(d, J = 2.4 Hz, 1H, H7), 4.75 (d, J = 2.2 Hz, 1H, H8), 1.38



(s, 3H, H10), 0.74 (s, 3H, H11).



13C NMR (101 MHz, DMSO-d6): δ (ppm) = 150.98 (C4-arom.), 143.94



(C17-arom.), 138.67 (C5-arom.), 129.24 (C16-arom.), 127.29 (C2H-arom.),



126.97 (C13H-arom.), 123.40 (C13H-arom.), 122.41 (C6H-arom.), 119.42



(C19H-arom.), 117.52 (C1H-arom.), 114.60 (C12-arom.), 111.24



(C20H-arom.), 108.80 (C3H-arom.), 105.55 (C18H-arom.), 68.08 (C8H),



45.16 (C9), 27.17 (C10H3), 24.88 (C11H3).









3-(3,3-dimnethylindolin-2-yl)-7-ethyl-H-indole (Procedure 1)
















VPC Number
LabBook Code
✓ IC50 (eGFP) = No Data


13 546
CA 2-67 F4-10 (yield = 62%)
✓ IC50 (PSA) = No Data













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✓ tR (HPLC) = 4.16 min    ✓ MS (ESI+) m/z = 277.1705              [(M + H)+] ✓ HRMS (ESI+): calculated for C19H21N2, m/z = 277.1699; found, 277.1707 ✓ 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.94 (s, 1H, H14), 7.39-7.35 (m, 1H, H20), 7.31 (d, J = 2.4 Hz, 1H, H13), 7.01 (d, J = 7.2 Hz, 1H, H6), 6.97 (td, J = 7.6, 1.3 Hz, 1H, H2), 6.87-6.83 (m, 2H, H18, 19), 6.61 (td, J = 7.2, 0.8 Hz, 1H, H1), 6.58 (d, J = 7.6 Hz, 1H, H3), 5.84 (d, J = 2.4 Hz, 1H, H7), 4.80 (d, J = 2.2 Hz, 1H, H8), 2.46 (s, 3H, H21),



1.39 (s, 3H, H10), 0.74 (s, 3H, H11).



13C NMR (101 MHz, DMSO-d6): δ (ppm) = 150.97 (C4-arom.), 138.68



(C5-arom.), 136.42 (C15-arom.), 127.32 (C2H-arom.), 126.97 (C16-arom.),



123.73 (C13H-arom.), 122.42 (C6H-arom.), 121.72 (C19H-arom.), 120.90



(C17-arom.), 118.96 (C18H-arom.), 117.73 (C20H-arom.), 117.57



(C1H-arom.), 114.63 (C12-arom.), 108.85 (C3H-arom.), 68.11 (C8H),



45.17 (C9), 27.16 (C10H3), 24.95 (C11H3), 17.27 (C21H3).









3-(3,3-dimethylindolin-2-yl)-7-fluoro-1H-indole (Procedure 1)
















VPC Number
LabBook Code
✓ IC50 (eGFP) = No Data


13 555
CA 2-90 F4-7 (yield = 62%)
✓ IC50 (PSA) = No Data













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✓ tR (HPLC) = 4.12 min    ✓ MS (ESI+) m/z = 281.1456              [(M + H)+] ✓ HRMS (ESI+): calculated for C18H18FN2, m/z = 281.1449; found, 281.1454 ✓ 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.49 (s, 1H, H14), 7.41-7.34 (m, 2H, H13, 20), 7.01 (d, J = 7.2 Hz, 1H, H6), 6.97 (td, J = 7.6, 1.3 Hz, 1H, H2), 6.94-6.86 (m, 2H, H18, 19), 6.65-6.57 (m, 2H, H1, 3), 5.91 (d, J = 2.5 Hz, 1H H7), 4.79 (d, J = 2.2 Hz, 1H, H8), 1.38 (s, 3H, H10), 0.74 (s, 3H, H11). ✓ 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 150.85 (C4-arom.), 148.48 (C17-



arom.), 138.51 (C5-arom.), 131.28 (d, J = 5.9 Hz, C16-arom.), 127.39 (C2H-



arom.), 125.19 (d, J = 0.6 Hz, C13H-arom.), 124.70 (d, J = 13.1 Hz, C15-



arom.), 122.45 (C6H-arom.), 119.05 (d, J = 6.3 Hz, C19H-arom.), 117.70 (C1H-



arom.), 116.45 (d, J = 3.2 Hz, C20H-arom.), 115.49 (d, J = 1.9 Hz, C12-arom.),



108.91 (C3H-arom.), 106.02 (d, J = 15.9 Hz, C18H-arom.), 67.86 (C8H), 45.25



(C9), 27.12 (C10H3), 24.90 (C11H3).









3-(3,3-dimethylindolin-2-yl)-1H-pyrrolo[2,3-b]pyridine (Procedure 3)
















VPC Number
LabBook Code
IC50 (eGFP) = 2.1


13 556
CA 2-100 F3-7 (yield = 76%)
IC50 (PSA) = 2.18













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tR (HPLC) = 3.52 min        MS (ESI+) m/z = 264.1501                 [(M + H)+] HRMS (ESI+): calculated for C17H18N3, m/z = 264.1495; found, 264.1500 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.51 (s, 1H, H14), 8.18 (dd, J = 4.6, 1.5 Hz, 1H, H20), 7.86 (dd, J = 7.9, 1.1 Hz, 1H, H18), 7.44 (d, J = 2.4 Hz, 1H, H13), 7.02 (d, J = 7.2 Hz, 1H, H6), 7.00-6.96 (m, 2H, H2,19), 6.63 (td, J = 7.4, 0.9 Hz, 1H, H1), 6.60 (d, J = 7.7 Hz, 1H, H3), 5.92 (d, J = 2.3 Hz, 1H, H7), 4.74 (d, J = 2.0 Hz, 1H, H8), 1.38 (s, 3H, H10), 0.74 (s, 3H, H11). 13C NMR (151 MHz, DMSO-d6): δ (ppm) = 150.38 (C4-arom.), 148.74 (C15-



arom.), 142.28 (C20H-arom.), 137.95 (C5-arom.), 127.99 (C18H-arom.),



126.96 (C2H-arom.), 123.93 (C13H-arom.), 121.97 (C6H-arom.), 118.98 (C16-



arom.), 117.26 (C1H-arom.), 114.92 (C19H-arom.), 112.80 (C12-arom.),



108.47 (C3H-arom.), 67.77 (C8H), 44.77 (C9), 26.62 (C10H3), 24.34 (C11H3).









3-(3,3-dimethyindolin-2-yl)-1H-indole-7-carboxyic Acid (Procedure 4)
















VPC Number
LabBook Code
IC50 (eGFP) = No Data


13 557
CA 2-104 Ap Tmt (yield = 82%)
IC50 (PSA) = No Data













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tR (HPLC) = 3.74 min         MS (ESI+) m/z = 307.1442                  [(M + H)+] HRMS (ESI+): calculated for C19H19N2O2, m/z = 307.1441; found, 304.1442 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 13.01 (br s, 1H, H22), 10.98 (s, 1H, H14), 7.87 (d, J = 7.8 Hz, 1H, H20), 7.74 (d, J = 6.8 Hz, 1H, H18), 7.35 (d, J = 2.3 Hz, 1H, H13), 7.07 (t, J = 7.7 Hz, 1H, H19), 7.02 (d, J = 7.2 Hz, 1H, H6), 6.98 (td, J = 7.6, 1.1 Hz, 1H, H2), 6.65-6.58 (m, 2H, H1,3), 5.93 (br s, 1H, H7), 4.83 (s, 1H, H8), 1.39 (s, 3H, H10), 0.73 (s, 3H, H11).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 168.45 (C21O), 150.89 (C4-




arom.), 138.46 (C5-arom.), 135.63 (C15-arom.), 128.93 (C16-arom.), 127.41



(C2H-arom.), 125.68 (C20H-arom.), 125.66 (C13H-arom.), 124.20 (C18H-



arom.), 122.48 (C6H-arom.), 118.42 (C19H-arom.), 117.69 (C1H-arom.),



114.65 (C12-arom.), 113.89 (C17-arom.), 108.90 (C3H-arom.), 67.76 (C8H),



45.25 (C9), 27.08 (C10H3), 24.91 (C11H3).









(3-(3,3-dimethylindolin-2-yl)-1H-indole-7-yl)methanol (Procedure 5)
















VPC Number
LabBook Code
IC50 (eGFP) = 1.6


13 558
CA 2-105 F6-11 (yield = 81%)
IC50 (PSA) = No Data













embedded image


tR (HPLC) = 3.45 min        MS (ESI+) m/z = 293.1651                  [(M + H)+] HRMS (ESI+): calculated for C19H21N2O, m/z = 293.1648; found, 293.1651 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.82 (s, 1H, H14), 7.45 (d, J = 7.8 Hz, 1H, H20), 7.29 (d, J = 2.4 Hz, 1H, H13), 7.05 (d, J = 6.8 Hz, 1H, H18), 7.01 (d, J = 7.2 Hz, 1H, H6), 6.97 (td, J = 7.6, 1.3 Hz, 1H, H2), 6.92 (dd, J = 7.8, 6.8 Hz, 1H), 6.61 (m, 2H, H1,3), 5.84 (d, J = 2.4 Hz, 1H, H7), 5.14 (t, J = 5.7 Hz, 1H, H18), 4.81 (d, J = 2.1 Hz, 1H, H8), 4.78 (d, J = 5.7



Hz, 2H, H21), 1.39 (s, 3H, H10), 0.74 (s, 3H, H11).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 150.97 (C4-arom.), 138.66




(C5H-arom.), 134.66 (C15-arom.), 127.36 (C2H-arom.), 127.32 (C16-arom.),



125.92 (C17-arom.), 123.87 (C13H-arom.), 122.43 (C6H-arom.), 119.41



(C18H-arom.), 118.92 (C20H-arom.), 118.62 (C19H-arom.), 117.57 (C1H-



arom.), 114.36 (C12-arom.), 108.85 (C3H-arom.), 68.06 (C8H), 60.82



(C21H2), 45.19 (C9), 27.15 (C10H3), 24.94 (C11H3).









(3-(3,3-dimethylindolin-2-yl)-1H-pyrrolo[2,3-c]pyridine (Procedure 6)
















VPC Number
LabBook Code
IC50 (eGFP) = 10.7


13 561
CA 2-121 Ap Tmt (yield = 35%)
IC50 (PSA) = No Data













embedded image


tR (HPLC) = 3.07 min         MS (ESI+) m/z = 264.1497                  [(M + H)+] HRMS (ESI+): calculated for C17H18N3, m/z = 264.1495; found, 264.1498 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.52 (s, 1H, H9), 8.73 (s, 1H, H3), 8.03 (s, 1H, H5), 7.59 (d, J = 1.7 Hz, 1H, H8), 7.49 (d, J = 4.3 Hz, 1H, H6), 7.04-6.95 (m, 2H, H11,15), 6.66-6.58 (m, 2H, H10,12), 5.94 (d, J = 1.9 Hz, 1H, H16), 4.78 (d, J = 2.3 Hz, 1H, H17), 1.38 (s, 3H, H19), 0.72 (s, 3H, H20). 13C NMR (151 MHz, DMSO-d6): δ (ppm) = 150.34 (C13-arom.), 137.94



(C14-arom.), 137.08 (C5H-arom.), 134.44 (C3H-arom.), 133.68 (C2-arom.),



130.91 (C1-arom.), 127.79 (C8H-arom.), 126.96 (C11H-arom.), 121.98



(C15H-arom.), 117.32 (C10H-arom.), 114.54 (C6H-arom.), 113.67 (C7-



arom.), 108.51 (C12H-arom.), 67.25 (C17H), 44.83 (C18), 26.51 (C19H3),



24.33 (C20H3).









(3-(3,3-dimethylindolin-2-yl)-1H-pyrrolo[3,2-b]pyridine (Procedure 6)
















VPC Number
LabBook Code
IC50 (eGFP) = 2.3


13 560
CA 2-123 Ap Tmt (yield = 72%)
IC50 (PSA) = No Data













embedded image


tR (HPLC) = 3.05 min         MS (ESI+) m/z = 264.1502                  [(M + H)+] HRMS (ESI+): calculated for C17H18N3, m/z = 264.1495; found, 264.1502 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.16 (s, 1H, H9), 8.32 (dd, J = 4.6, 1.5 Hz, 1H, H5), 7.75 (dd, J = 8.2, 1.5 Hz, 1H, H3), 7.58 (d, J = 2.1 Hz, 1H, H8), 7.09 (dd, J = 8.2, 4.6 Hz, 1H, H4), 6.99 (d, J = 7.2 Hz, 1H, H15), 6.96 (td, J = 7.6, 1.3 Hz, 1H, H11), 6.63-6.57 (m, 2H, H10,12), 5.86 (d, J = 2.7 Hz, 1H, H16), 5.06 (dd, J = 2.8, 0.6 Hz, 1H, H17), 1.51 (s, 3H, H19), 0.72 (s, 3H, H20).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 150.85 (C13H-arom.), 145.29




(C1-arom.), 142.28 (C5H-arom.), 139.08 (C14-arom.), 129.27 (C2-arom.),



127.40 (C8H-arom.), 127.23 (C11H-arom.), 122.51 (C15H-arom.), 118.77



(C3H-arom.), 117.72 (C10H-arom.), 116.55 (C4H-arom.), 115.09 (C7-arom.),



108.96 (C12H-arom.), 65.98 (C17H), 45.02 (C18), 27.20 (C19H3), 25.21



(C20H3).









Cyclohexyl-Hydroindole Moiety
3-(spiro[cyclohexane-1,3′-indolin]-2′-yl)-1H-indole (Procedure 1)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.8


13 534
CA 2-8 F18-23 (yield = 47%)
IC50 (PSA) = 1.25













embedded image

(Beige Solid)

tR (HPLC) = 4.39 min     MS (ESI+) m/z = 303.1775                [(M + H)+] HRMS (ESI+): calculated for C21H23N2, m/z = 303.1856; found, 303.1852 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.92 (s, 1H, H12), 7.32 (d, J = 8.0 Hz, 1H, H18), 7.27 (d, J = 2.4 Hz, 1H, H11), 7.17 (d, J = 7.1 Hz, 1H, H6), 7.02-6.96 (m, 3H, H2,15,17), 6.78 (td, J = 7.6, 0.8 Hz, 1H, H16), 6.61 (td, J = 7.4, 1.0 Hz, 1H, H1), 6.53 (d, J = 7.4 Hz, 1H, H3), 5.71 (s, 1H, H7), 4.83 (s, 1H, H8), 1.82-1.14 (m, 2H, H19,20,21,22,23). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 151.59 (C4-arom.), 137.65 (C5-arom.), 137.07 (C13-arom.), 127.58 (C2H-arom.), 126.78 (C14-arom.), 124.83 (C11H-arom.), 123.58 (C6H-arom.), 121.08 (C17H-arom.), 120.68 (C15H-arom.), 118.75 (C16H- arom.), 117.00 (C1H-arom.), 115.58 (C10-arom.), 111.86 (C18H-arom.), 108.32 (C3H-arom.), 65.96 (C8H), 48.29 (C9), 37.43 (C19H2), 31.94 (C23H2), 25.99 (C21H2), 22.96 (C20H2), 22.81 (C22H2).









3-(spiro[cyclohexane-1,3′-indolin]-2′-yl)-5-methyl-1H-indole (Procedure 1)
















VPC Number
LabBook Code
IC50 (eGFP) = 3.2


13 548
CA 2-72 F12-18 (yield = 69%)
IC50 (PSA) = 4.24













embedded image

(Beige Solid)

tR (HPLC) = 4.57 min     (MS (ESI+) m/z = 317.1950 [(M + H)+] HRMS (ESI+): calculated for C22H25N2, m/z = 317.2012; found, 317.2008 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.78 (d, J = 1.4 Hz, 1H, H9), 7.22-7.19 (m, 2H, , H3,8), 7.17 (d, J = 7.6 Hz, 1H, H15), 7.00 (td, J = 7.6, 1.2 Hz, 1H, H11), 6.82 (dd, J = 8.3, 1.5 Hz, 1H, H4), 6.75 (br s, 1H, H6), 6.62 (td, J = 7.4, 1.0 Hz, 1H, H10), 6.53 (d, J = 7.6 Hz, 1H, H12), 5.65 (s, 1H, H16), 4.78 (s, 1H, H17), 2.18 (s, 3H, H24), 1.80-1.16 (m, 10H, H19,20,21,22,23). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 151.69 (C13-arom.), 137.72 (C14-arom.), 135.43 (C2-arom.), 127.45 (C11H-arom.), 127.03 (C5-arom.), 126.85 (C1-arom.), 124.83 (C8H-arom.), 123.64 (C15H-arom.), 122.62 (C4H-arom.), 120.51 (C6H-arom.), 116.95 (C10H-arom.), 114.98 (C7- arom.), 111.51 (C3H-arom.), 108.44 (C12H-arom.), 66.18 (C17H), 48.25 (C18), 37.22 (C19H2), 31.96 (C23H2), 26.00 (C21H2), 23.01 (C20H2), 22.75 (C22H2), 21.88 (C24H3).









3-(spiro[cyclohexane-1,3′-indolin]-2′-yl)-7-methyl-H-indole (Procedure 1)
















VPC Number
LabBook Code
IC50 (eGFP) = 1.7


13 549
CA 2-73 F9-15 (yield = 72%)
IC50 (PSA) = 2.57













embedded image

(Beige Solid)

tR (HPLC) = 4.58 min     MS (ESI+) m/z = 317.1932 [(M + H)+] HRMS (ESI+): calculated for C22H25N2, M/Z = 317.2012; found, 317.2022 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.88 (s, 1H, H9), 7.25 (d, J = 2.5 Hz, 1H, H8), 7.16 (d, J = 7.0 Hz, 1H, H15), 6.98 (td, J = 7.6, 1.2 Hz, 1H, H11), 6.85 (d, J = 7.9 Hz, 1H, H6), 6.80 (d, J = 7.0 Hz, 1H, H4), 6.70 (t, J = 7.6 Hz, 1H, H5), 6.60 (td, J =7.4, 1.0 Hz, 1H, H10), 6.53 (dd, J = 7.6, 0.4 Hz, 1H, H12),5.67 (s, 1H, H16), 4.82 (s, 1H, H17), 2.43 (s, 3H, H24), 1.83-1.17 (m, 10H, H19,20,21,22,23). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 151.60 (C13-arom.), 137.67 (C14-arom.), 136.53 (C2-arom.), 127.56 (C11H-arom.), 126.48 (C1-arom.), 124.52 (C8H-arom.), 123.60 (C15H-arom.), 121.61 (C4H-arom.), 120.80 (C3-arom.), 118.95 (C5H-arom.), 118.30 (C6H-arom.), 116.98 (C10H- arom.), 116.02 (C7-arom.), 108.33 (C12H-arom.), 66.00 (C17H), 48.28 (C18), 37.44 (C19H2), 31.95 (C23H2), 26.00 (C21H2), 22.97 (C20H2), 22.80 (C22H2), 17.25 (C24H3).









3-(spiro[cyclohexane-1,3′-indolin]-2′-yl)-6-(benzyloxy)-1H-indole (Procedure 1)
















VPC Number
LabBook Code
IC50 (eGFP) = 11.8


13 550
CA 2-76 F13-24 (yield = 55%)
IC50 (PSA) = No Data













embedded image

(Beige Solid)

tR (HPLC) = 5.07 min     MS (ESI+) m/z = 409.2254 [(M + H)+] HRMS (ESI+): calculated for C28H29N2O, m/z = 409.2274; found, 409.2278 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.72 (d, J = 1.7 Hz, 1H, H12), 7.46- 7.42 (m, 2H, H22,26), 7.41-7.36 (m, 2H, H23,25), 7.34-7.30 (m, 1H, , H24), 7.17- 7.12 (m, 2H, , H6,11), 6.98 (td, J = 7.6, 1.2 Hz, 1H, H2), 6.89 (d, J = 2.2 Hz, 1H, H15), 6.82 (br d, J = 8.7 Hz, 1H, H18), 6.60 (td, J = 7.4, 1.0Hz, 1H, H1), 6.54-6.50 (m, 2H, , H3-17), 5.67 (s, 1H, H7), 5.07 (s, 2H, H20), 4.76 (s, 1H, H8), 1.80-1.15 (m, 10H, H19,20,21,22,23). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 154.56 (C16-arom.), 151.55 (C4-arom.), 138.16 (C21-arom.), 137.71 (C5-arom.), 137.65 (C13-arom.), 128.82 (C23,25H-arom.), 128.04 (C24H-arom.), 127.88 (C22,26H-arom.), 127.58 (C2H-arom.), 123.67 (C6H- arom.), 123.54 (C11H-arom.), 121.34 (C14-arom.), 121.31 (C18H-arom.), 116.98 (C1H-arom.), 115.58 (C10-arom.), 109.47 (C17H-arom.), 108.32 (C3H-arom.), 96.43 (C15H-arom.), 69.87 (C20H2), 66.04 (C8H), 48.22 (C9), 37.40 (C19H2), 31.91 (C23H2), 25.99 (C21H2), 22.95 (C20H2), 22.83 (C22H2).









3-(spiro[cyclohexane-1,3′-indolin]-2′-yl)-6-hydroxy-1H-indole (Procedure 2)
















VPC Number
LabBook Code
IC50 (eGFP) = 15.5


13 551
CA 2-83 F2-7 (yield = 38%)
IC50 (PSA) = No Data













embedded image

(Beige Solid)

tR (HPLC) = 3.57 min    MS (ESI+) m/z = 319.1824              [(M + H)+] HRMS (ESI+): calculated for C21H23N2O, m/z = 319.1805; found, 319.1802 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.51 (d, J = 1.5 Hz, 1H, H12), 8.79 (s, 1H, H24), 7.15 (d, J = 7.0 Hz, 1H, H6), 7.04 (d, J = 2.3 Hz, 1H, H11), 6.97 (td, J = 7.6, 1.2 Hz, 1H, H2), 6.72 (d, J = 8.5 Hz, 1H, H18), 6.67 (d, J =2.0 Hz, 1H, H15), 6.59 (td, J = 7.4, 1.0 Hz, 1H, H1), 6.51 (d, J = 7.7 Hz, 1H,H3), 6.30 (dd, J = 8.6, 2.2 Hz, 1H, H17), 5.64 (s, 1H, H7), 4.73 (s, 1H, H8), 1.81-1.16 (m, 10H, H19,20,21,22,23). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 153.10 (C16-arom.), 151.57 (C4-arom.), 138.21 (C13-arom.), 137.70 (C5-arom.), 127.52 (C2H-arom.), 123.55 (C6H- arom.), 122.74 (C11H-arom.), 121.06 (C18H-arom.), 120.26 (C14-arom.), 116.91 (C1H-arom.), 115.43 (C10- arom.), 109.35 (C17H-arom.), 108.29 (C3H-arom.), 96.85 (C15H-arom.), 66.16 (C8H), 48.18 (C9), 37.38 (C19H2), 31.91 (C23H2), 26.01 (C21H2), 22.97 (C20H2), 22.83 (C22H2).









3-(spiro[cyclohexane-1,3′-indolin]-2′-yl)-7-hydroxy-1H-indole (Procedure 2)
















VPC Number
LabBook Code
IC50 (eGFP) = 1.1


13 552
CA 2-84 Precipitate
IC50 (PSA) = 1.14



(yield = 28%)














embedded image

(Brown Solid)

tR (HPLC) = 3.81 min    MS (ESI+) m/z = 319.1728              [(M + H)+] HRMS (ESI+): calculated for C21H23N2O, m/z = 319.1805; found, 319.1814 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 10.72 (d, J = 1.8 Hz, 1H, H12), 9.42 (s, 1H, H24), 7.14 (d, J = 7.1 Hz, 1H, H6), 7.12 (d, J = 2.5 Hz, 1H, H11), 6.97 (td, J = 7.6, 1.2 Hz, 1H, H2), 6.59 (m, 2H, H1,17), 6.52 (m, 2H, H3,18), 6.42 (dd, J = 7.4, 0.8 Hz, 1H, H16), 5.65 (s, 1H, H7), 4.79 (s, 1H, H8), 1.82-1.16 (m, 10H, H19,20,21,22,23). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 151.60 (C4- arom.), 143.87 (C15-arom.), 137.66 (C5-arom.), 128.78 (C14-arom.), 127.50 (C2H-arom.), 127.06 (C13-arom.), 124.10 (C11H-arom.), 123.60 (C6H-arom.), 119.38 (C17H- arom.), 116.93 (C1H-arom.), 115.94 (C10-arom.), 111.78 (C18H-arom.), 108.29 (C3H-arom.), 105.41 (C16H-arom.), 65.88 (C8H), 48.33 (C9), 37.45 (C19H2), 31.93 (C23H2), 26.00 (C21H2), 22.98 (C20H2), 22.79 (C22H2).









Unexpected Compounds—General Procedure 7

Phenylhydrazine (1.0 eq) aldehyde (isobutyraldehyde or cyclohexanecarboxaldehyde) (1.0 eq) were diluted in AcOH (0.1 M). The mixture was heated at 65° C. for 2 h (until complete conversion). Then, 7-azaindole or 1,5,6,7-Tetrahydro-4H-indol-4-one (1.0 eq) was added and the reaction mixture was stirred additional 24 h at 100° C. (until complete conversion). Acetic acid was removed under vacuo. Then, the residue was poured with H2O and neutralized at pH 7 with sat. NaHCO3 solution. The aqueous layer was extracted with AcOEt (×3) and organic layers were combined, washed with brine, dried over Na2SO4 and evaporated under reduced pressure. Then, crude was purified by automated combi-flash to afford the good compound.


3-(3,3-dimethyl-3H-indol-2-yl)-1H-pyrrolo[2,3-b]pyri dine (Procedure 7)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.7


13 537
CA 2-39 F9-15 (yield = 25%)
IC50 (PSA) = 0.81













embedded image

(Yellow Solid)

tR (HPLC) = 3.17 min      MS (ESI+) m/z = 262.1345                [(M + H)+] HRMS (ESI+): calculated for C17H16N3, m/z =262.1339; found, 262.1345 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 12.40 (s, 1H, H14), 8.94 (dd, J = 7.9, 1.7 Hz, IH, H18), 8.40 (s, IH, H13), 8.35 (dd, J = 4.6, 1.6 Hz, 1H, H20), 7.56 (d, J = 7.5 Hz, 1H, H3), 7.49 (d, J = 6.8 Hz, 1H, H6), 7.32 (td, J = 7.6, 1.2 Hz, 1H, H2), 7.28 (dd, J = 7.9, 4.7 Hz, 1H, H19), 7.20 (td, J = 7.4, 1.0 Hz, 1H, H1), 1.54 (s, 6H, H10,11). 3C NMR (101 MHz, DMSO-d6): δ (ppm) = 180.97 (C8), 154.77 (C4-arom.), 149.39 (C15-arom.), 146.90 (C5-arom.), 144.50 (C20H-arom.), 131.69 (C18H-arom.), 130.45 (C13H-arom.), 127.92 (C2H-arom.), 124.80 (C1H-arom.), 121.61 (C6H- arom.), 119.71 (C3H-arom.), 119.05 (C16-arom.), 117.73 (C19H-arom.), 108.26 (C12-arom.), 53.39 (C9), 25.82 (C10,11).









Tetrahydro-3-(3,3-dimethyl-3H-indol-2-yl)-1H-indol-4-one (Procedure 7)
















VPC Number
LabBook Code
IC50 (eGFP) = No Data


13 539
CA 2-48 F19-22 (yield = 9%)
IC50 (PSA) = No Data













embedded image

(Yellow Solid)

tR (HPLC) = 3.54 min    MS (ESI+) m/z = 279.1498              [(M + H)+] HRMS (ESI+): calculated for C18H19N2O, m/z = 279.1492; found, 279.1498 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 12.27 (s, 1H, H14), 7.54-7.48 (m, 2H, H3,6), 7.33 (td, J = 7.6, 1.3 Hz, 1H, H2), 7.22 (td, J = 7.4, 1.0 Hz, 1H, H1), 7.05 (d, J = 1.8 Hz, 1H, H13), 2.85 (t, J = 6.1 Hz, 2H, H17), 2.39 (t, J = 6.4 Hz, 2H, H17), 2.09-2.02 (m, 2H, H18), 1.46 (s, 6H, H10,11). 3C NMR (101 MHz, DMSO-d6): δ (ppm) = 193.35 (C20O), 176.21 (C8), 153.76 (C4-arom.), 148.19 (C15-arom.), 147.25 (C5-arom.), 128.13 (C2H-arom.), 126.38 (C12-arom.), 125.40 (C1H-arom.), 121.96 (C6H-arom.), 121.76 (C16-arom.), 119.76 (C3H-arom.), 109.82 (C13H-arom.), 52.57 (C9), 38.25 (C19H2), 25.49 (C10,11H3), 23.71 (C18H2), 22.70 (C17H2).









3-(spiro[cyclohexane-1,3′-indolin]-2′-yl)-1H-pyrrolo[2,3-b]pyridine (Procedure 7)
















VPC Number
LabBook Code
IC50 (eGFP) = 6.6


13 559
CA 2-110 F18-27
IC50 (PSA) = No Data



(yield = 23%)














embedded image

(Brown Solid)

tR (HPLC) = 3.70 min    MS (ESI+) m/z = 302.1654              [(M + H)+] HRMS(ESI+): calculated for C20H20N3, m/z = 302.1652; found, 302.1654 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 12.39 (s, 1H, H17), 9.00 (dd, J = 7.9, 1.7 Hz, 1H, H21), 8.45 (d, J = 2.0 Hz, 1H, H16), 8.35 (dd, J = 4.6, 1.6 Hz, 1H, H23), 7.87 (d, J = 7.3 Hz, 1H, H6), 7.62 (dd, J = 7.6, 0.6 Hz, 1H, H3), 7.38 (td, J = 7.6, 1.0 Hz, 1H,H2), 7.27 (dd, J = 7.9, 4.7 Hz, 1H, H22), 7.17 (td, J = 7.5, 1.1Hz, 1H, H1), 2.34-2.25 (m, 2H, H10), 2.07- 1.77 (m, 6H, H11,12,13), 1.32-1.26 (m, 2H, H14). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 180.61 (C8), 155.41 (C4-arom.), 149.19 (C18-arom.), 145.63 (C5-arom.), 144.45 (C23H-arom.), 132.08 (C21H-arom.), 130.23 (C16H-arom.), 127.95 (C2H-arom.), 124.74 (C6H-arom.), 123.93 (C1H-arom.), 120.36 (C3H-arom.), 119.45 (C19-arom.), 117.71 (C22H-arom.), 107.92(C15-arom.), 57.86 (C9), 33.53 (C10,14H2), 24.81 (C12H2), 21.89 (CH11,13H2).









Quinoline Moiety—General Procedure 9

In microwave vessel, quinoline (2.0 eq) and indole (1.0 eq) were mixed together and the system was sealed and placed under nitrogen, after a purge with vacuum/N2 (3 times). Then, HCl solution 4M in 1,4-dioxane (1.2 eq) was added with the needle immersed in the mixture (exothermic reaction). The reaction mixture was heated with microwave during 2 h at 160° C. The reaction mixture was taken up with a minimum of MeOH and when the residue was dissolved, it was transferred in mixture of AcOEt and saturated NaHCO3 solution. The resulting solution was extracted and the aqueous phase was washed with AcOEt (×2). The organic layers were combined, washed with 0.01 M critic acid solution, saturated NaHCO3 solution, dried over Na2SO4 and concentrated to dryness under reduced pressure. Finally, the crude was purified by automated combi-flash to afford the good compound.


General Procedure 10

Halogenated-compound (1.0 eq), boronic acid (or boronate) (1.1 eq) and Pd(PPh3)4 (10% mol) was added in microwave vessel (10-20 mL). The vial was sealed with a cap and the system was purged with vacuum and placed under N2. Then, the solids were dissolved in mixture of Toluene/EtOH (4.5:2.0, 0.11 M) and purged with vacuum/N2 one more time. Then, a solution of K2CO3 (3.0 eq) in H2O (1.8 M) was added. The reaction mixture was stirred and heated overnight at 95° C. with oil bath. The reaction mixture was filtered on plug of celite. The filtrate was was poured with water and was extracted with AcOEt (×3). The organic layers were combined, washed with brine, dried over Na2SO4 and evaporated under reduced pressure. The residue was taken up in DCM/TFA (5:5) for 2 h at r.t. The solvents were evaporated under reduced pressure. The residue was then neutralized with saturated NaHCO3 solution and extracted with AcOEt (×2). The organic layers were washed, dried and concentrated in vacuo. The residue was precipitate in DCM or purified by automated combi-flash to afford the good compound.


2-(1H-indol-3-yl)-4-methylquinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 5.6


13 547
CA 2-69 F6-11
IC50 (PSA) = No Data



(yield = 62%)














embedded image

(Beige Solid)

tR (HPLC) = 3.20 min    MS (ESI+) m/z = 259.1243              [(M + H)+] Mp = 168-180° C. HRMS (ESI+): calculated for C18H15N2, m/z = 259.1230; found, 259.1237 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.63 (s, 1H, H14), 8.90-8.85 (m, 1H, H20), 8.32 (d, J = 2.8 Hz, 1H, H13), 8.04-7.98 (m, 2H, H3,6), 7.94 (d, J = 0.9 Hz, 1H, H9), 7.71 (ddd, J = 8.3, 6.9, 1.4 Hz, 1H, H2), 7.53-7.44 (m, 2H, H1,17), 7.24-7.16 (m, 2H, H18,19), 2.71 (d, J = 0.8 Hz, 3H, H12). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 155.74 (C8- arom.), 148.21 (C4-arom.), 143.61 (C10-arom.), 137.64 (C15-arom.), 129.51 (C2H-arom.), 129.39 (C3H-arom.), 127.98 (C13H-arom.), 126.42 (C5-arom.), 126.13 (C16- arom.), 125.18 (C1H-arom.), 124.35 (C6H-arom.), 123.12 (C20H-arom.), 122.48 (C18H-arom.), 120.68 (C19H-arom.), 119.90 (C9H-arom.), 115.97 (C11-arom.), 112.16 (C17H-arom.), 18.76 (C12H3).









2-(7-methoxy-1H-indol-3-yl)-4-methylquinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 0.6


13 554
CA 2-87 F7-10
IC50 (PSA) = 0.67



(yield = 22%)














embedded image

(Yellow Solid)

tR (HPLC) = 3.37 min    MS (ESI+) m/z = 289.1336              [(M + H)+] Mp = 146-152° C. HRMS (ESI+): calculated for C19H17N2O, m/z = 289.1335; found, 289.1335 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.73 (s, 1H, H14), 8.45 (d, J = 8.0 Hz, 1H, H20), 8.21 (d, J = 2.9 Hz, 1H, H13), 8.03-7.99 (m, 2H, H3,6), 7.95 (d, J = 0.8 Hz, 1H, H9), 7.70 (ddd, J = 8.2, 6.8, 1.3 Hz, 1H, H2), 7.50 (ddd, J = 8.2, 6.9, 1.2 Hz, 1H, H1), 7.11 (t, J = 7.9 Hz, 1H, H19), 6.79 (d, J = 7.5 Hz, 1H, H18), 3.97 (s, 3H, H22), 2.70 (d, J = 0.8 Hz, 3H, H12). 13C NMR (151 MHz, DMSO-d6): δ (ppm) = 155.23 (C8- arom.), 147.71 (C4-arom.), 146.06 (C17-arom.), 143.11 (C10-arom.), 129.00 (C2H-arom.), 128.91 (C3H-arom.), 127.23 (C15-arom.), 127.14 (C16-arom.), 126.97 (C13H- arom.), 125.95 (C5-arom.), 124.69 (C1H-arom.), 123.85 (C6H-arom.), 120.76 (C19H-arom.), 119.52 (C9H-arom.), 116.09 (C11-arom.), 115.37 (C20H-arom.), 102.58 (C18H- arom.), 55.18 (C22H3), 18.24 (C12H3).









2-(1H-indol-3-yl)quinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 0.06


13 562
CA 2-128 F8-12
IC50 (PSA) = 0.14



(yield = 46%)














embedded image

(Beige Solid)

tR (HPLC) = 2-91 min    MS (ESI+) m/z = 245.1073              [(M + H)+] Mp = 184-187° C. HRMS (ESI+): calculated for C17H13N2, m/z = 245.1073; found, 245.1075 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.65 (s, 1H, H13), 8.88 (d, J = 8.5 Hz, 1H, H19), 8.35 (d, J = 2.7 Hz, 1H, H12), 8.26 (d, J = 8.6 Hz, 1H, H10), 8.06 (d, J = 8.7 Hz, 1H, H9), 8.04 (d, J = 8.3 Hz, 1H, H3), 7.89 (d, J = 7.9 Hz, 1H, H6), 7.72 (t, J = 7.6 Hz, 1H, H2), 7.51 -7.46 (m, 2H, H1,16), 7.24-7.18 (m, 2H, H17,18). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 155.56 (C8- arom.), 147.75 C4-arom.s), 137.21 (C14-arom.), 135.59 (C10H-arom.), 129.34 (C2H-arom.), 128.34 (C3H-arom.), 27.79 (C6H-arom.), 127.61 (C12H-arom.), 125.80 (C5- arom.), 125.58 (C15-arom.), 124.88 (C1H-arom.), 122.57 (C19H-arom.), 122.08 (C17H-arom.), 120.31 (C18H- arom.), 119.21 (C9H-arom.), 115.49 (C11H-arom.), 111.73 (C16H-arom.).









2-(7-fluoro-1H-indol-3-yl)quinoline (Procedure 9)
















VPC Number
LabBook
CodeIC50 (eGFP) = 1.6


13 569
CA 3-45 F13-23 Precipitate
IC50 (PSA) = Not Tested



(yield = 34%)














embedded image

(Red Solid)

tR (HPLC) = 3.02 min    MS (ESI+) m/z = 263.1009              [(M + H)+] Mp = 152-154° C. HRMS (ESI+ ): calculated for C17H12FN2, m/z = 263.0979; found, 263.0976 1H NMR (500 MHz, DMSO-d6): δ (ppm) = 12.17 (s, 1H, H13), 8.71 (d,J = 8.0 Hz, 1H, H19), 8.44 (d, J = 2.8 Hz, 1H, H12), 8.29 (d, J = 8.7 Hz, 1H, H10), 8.10 (d, J = 8.7 Hz, 1H, H9), 8.05 (d, J = 8.3 Hz, 1H, H3), 7.91 (d, J = 7.5 Hz, 1H, H6), 7.73 (t, J = 7.5 Hz, 1H, H2), 7.51 (t, J = 7.5 Hz, 1H, H1), 7.21-7.15 (m, 1H, H18), 7.06 (dd, J = 11.4, 7.8 Hz, 1H, H17). 13C NMR (126 MHz, DMSO-d6): δ (ppm) = 155.50 (C8-arom.), 149.63 (d, J = 243.4 Hz, C16-arom.), 148.13 (C4-arom.), 136.29 (C10H-arom.), 129.92 (C2H-arom.), 129.85 (d, J = 5.2 Hz, C15- arom.), 129.18 (C12H-arom.), 128.90 (C3H-arom.), 128.14 (C6H- arom.), 126.41 (C5-arom.), 125.63 (C1H-arom.), 125.52 (d, J = 13.2 Hz, C14-arom.), 121.14 (d, J = 6.2 Hz, C18H-arom.), 119.76 (C9H-arom.), 119.30 (d, J = 3.0 Hz, C19H-arom.), 116.97 (d, J = 1.3 Hz, C11-arom.), 107.43 (d, J = 15.6 Hz, C17H-arom.).









2-(7-ethyl-1H-indol-3-yl)quinoline
















VPC Number
LabBook
CodeIC50 (eGFP) = 0.2


13 567
CA 3-46 P2 F6-13
IC50 (PSA) = 0.23



(yield = 45%)














embedded image

(Yellow Solid)

tR (HPLC) = 3.16 min    MS (ESI+) m/z = 273.1719              [(M + H)+]. Mp = 159-162° C. HRMS (ESI+: calculated for C19H17N2, m/z = 273.1386; found, 273.1389 1H NMR (500 MHz, DMSO-d6): δ (ppm) = 11.63 (s, 1H, H13), 8.73 (d, J = 7.9 Hz, 1H, H19), 8.34 (d, J = 2.9 Hz, 1H, H12), 8.25 (d, J = 8.7 Hz, 1H, H10), 8.09 (d, J = 8.7 Hz, 1H, H9), 8.03 (d, J = 8.4 Hz, 1H, H3), 7.88 (d, J = 7.2 Hz, 1H, H6), 7.71 (ddd, J = 8.3, 7.0, 1.4 Hz, 1H, H2), 7.48 (ddd, J = 7.5, 6.5, 1.0 Hz, 1H, H1), 7.15 (t, J = 7.8 Hz, 1H, H18), 7.05 (d, J = 6.9 Hz, 1H, H17), 2.93 (q, J = 7.5 Hz, 2H, H20), 1.32 (t, J = 7.5 Hz, 3H, H21). 13C NMR (126 MHz, DMSO-d6): δ (ppm) = 156.14 (C8-arom.), 148.27 (C4-arom.), 136.38 (C14-arom.), 135.97 (C10H-arom.), 129.76 (C2H-arom.), 128.86 (C3H-arom.), 128.07 (C6H-arom.), 127.98 (C12H- arom.), 127.62 (C16-arom.), 126.28 (C5-arom.), 126.00 (C15-arom.), 125.30 (C1H-arom.), 121.28 (C17H-arom.), 121.08 (C18H-arom.), 120.74 (C19H- arom.), 119.80 (C9H-arom.), 116.39 (C11-arom.), 24.09 (C20H2), 15.01 (C21H3).









2-(2-methyl-1H-indol-3-yl)quinoline
















VPC Number
LabBook
CodeIC50 (eGFP) = 20.0


13 570
CA 3-47 F35-40 (yield = 29%)
IC50 (PSA) = Not Tested













embedded image

(Brown Solid)

tR (HPLC) = 2.91 min    MS (ESI+) m/z = 259.1435              [(M + H)+] Mp = 67-75° C. HRMS (ESI+): calculated for C18H15N2, m/z = 259.1230; found, 259.1230 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.48 (s, 1H, H13), 8.34 (d, J = 8.6 Hz, 1H, H10), 8.21 (dd, J = 6.5, 2.4 Hz, 1H, H19), 8.01 (d, J = 8.4 Hz, 1H, H3), 7.94 (d, J = 7.6 Hz, 1H, H6), 7.85 (d, J = 8.6 Hz, 1H, H9), 7.73 (ddd, J = 8.4, 6.9, 1.4 Hz, 1H, H2), 7.52 (ddd, J = 8.0, 7.0, 1.1 Hz, 1H, H1), 7.40 (dd, J = 6.4, 2.2 Hz, 1H, H16), 7.15- 7.11 (m, 2H, H17,18), 2.77 (s, 3H, H20). 13C NMR (126 MHz, DMSO-d6): δ (ppm) = 156.19 (C8-arom.), 148.41 (C4-arom.), 137.38 (C12-arom.), 136.27 (C10H-arom.), 135.74 (C14-arom.), 129.85 (C2H-arom.), 128.87 (C3H-arom.), 128.13 (C6H-arom.), 127.46 (C15-arom.), 125.97 (C5-arom.), 125.58 (C1H- arom.), 121.69 (C9H-arom.), 121.53 (C17H-arom.) 120.38 (C18H-arom.), 120.18 (C19H-arom.), 112.46 (C11-arom.), 111.34 (C16H-arom.), 14.36 (C20H3).









2-(6-bromo-1H-indol-3-yl)quinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 1.3


13 568
CA 3-49 F44-63 Precipitate (yield = 46%)
IC50 (PSA) = 1.56













embedded image


tR (HPLC) = 3.29 min            MS (ESI+) m/z =                       323.0190, 325.0174                       [(M + H)+] Mp = 189-194° C. HRMS (ESI+): calculated for C17H12BrN2, m/z = 323.0178, 325.0159; found, 323.0183, 325.0167 1H NMR (500 MHz, DMSO-d6): δ (ppm) = 11.79 (s, 1H, H13), 8.84 (d, J =


(Yellow Solid)
8.5 Hz, 1H, H19), 8.39 (d, J = 2.8 Hz, 1H, H12), 8.28 (d, J = 8.7 Hz, 1H, H10),



8.05 (m, 2H, H3, 9), 7.90 (d, J = 7.5 Hz, 1H, H6), 7.72 (t, J = 7.5 Hz, 1H, H2),



7.67 (d, J = 1.6 Hz, 1H, H16), 7.50 (t, J = 7.5 Hz, 1H, H1), 7.34 (dd, J = 8.5,



1.8 Hz, 1H, H18).




13C NMR (126 MHz, DMSO-d6): δ (ppm) = 155.52 (C8-arom.), 148.15 (C4-




arom.), 138.58 (C14-arom.), 136.27 (C10H-arom.), 129.91 (C2H-arom.),



129.11 (C12H-arom.), 128.88 (C3H-arom.), 128.13 (C6H-arom.), 126.37 (C5-



arom.), 125.59 (C1H-arom.), 125.11 (C15-arom.), 124.82 (C19H-arom.),



123.65 (C18H-arom.), 119.57 (C9H-arom.), 116.11 (C11-arom.), 115.31 (C17-



arom.), 114.82 (C16H-arom).









2-(1-methyl-1H-indol-3-yl)quinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 1.1


13 571
CA 3-56 Precipitate (yield = 53%)
IC50 (PSA) = Not Tested













embedded image


tR (HPLC) = 3.05 min          MS (ESI+) m/z = 259.1355                   [(M + H)+] Mp = 175-179° C. HRMS (ESI+): calculated for C18H15N2, m/z = 259.1230; found, 259.1232 1H NMR (500 MHz, DMSO-d6): δ (ppm) = 8.88 (d, J = 8.5 Hz, 1H, H19), 8.34 (s, 1H, H12), 8.27 (d, J = 8.7 Hz, 1H, H10), 8.03 (d, J = 8.3 Hz, 1H, H3), 7.98 (d, J = 8.7 Hz, 1H, H9), 7.89 (d, J = 7.2 Hz, 1H, H6), 7.72 (t, J = 7.6 Hz, 1H, H2),


(Yellow Solid)
7.54 (d, J = 7.5 Hz, 1H, H16), 7.49 (t, J = 7.6 Hz, 1H, H2), 7.29-7.26 (m, 2H,



H17, 18), 3.91 (s, 3H, H20).




13C NMR (126 MHz, DMSO-d6): δ (ppm) = 155.64 (C8-arom.), 148.28 (C4-




arom.), 138.16 (C14-arom.), 136.21 (C10H-arom.), 132.24 (C12H-arom.), 129.88



(C2H-arom.), 128.84 (C3H-arom.), 128.11 (C6H-arom.), 126.43 (C15-arom.),



126.27 (C5-arom.), 125.40 (C1H-arom.), 123.16 (C19H-arom.), 122.66 (C17H-



arom.), 121.07 (C18H-arom.), 119.50 (C9H-arom.), 115.00 (C11-arom.), 110.58



(C16H-arom.), 33.40 (C20H3-arom.).









2-(1H-indazol-1-yl)quinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 0.7


13 572
CA 3-59 F11 (yield = 25%)
IC50 (PSA) = Not Tested













embedded image


tR (HPLC) = 4.44 min      MS (ESI+) m/z = 246.1019               [(M + H)+] Mp = 91-96° C. HRMS (ESI+): calculated for C16H12N3, m/z = 246.1026; found, 246.1028 1H NMR (500 MHz, CDCl3): δ (ppm) = 9.18 (d, J = 8.5 Hz, 1H, H16), 8.28 (d, J = 9.0 Hz, 1H, H9), 8.25-8.21 (m, 2H, H10, 11), 8.11 (d, J = 8.4 Hz, 1H, H3), 7.82-7.77 (m, 2H, H6, 19), 7.72 (ddd, J = 8.3, 7.0, 1.4 Hz, 1H, H2), 7.59 (ddd, J =


(White Solid)
8.3, 7.0, 1.0 Hz, 1H, H17), 7.48 (ddd, J = 8.1, 7.0, 1.3 Hz, 1H, H1), 7.32 (ddd,



J = 8.0, 7.0, 1.0 Hz, 1H, H18).




13C NMR (126 MHz, CDCl3): δ (ppm) = 152.95 (C8-arom.), 146.66 (C4-




arom.), 139.00 (C4-arom.), 138.46 (C10H-arom.), 137.18 (C11H-arom.), 130.05



(C2H-arom.), 128.36 (C3H-arom.), 128.22 (C17H-arom.), 127.67 (C6H-arom.),



126.28 (C5-arom.), 126.14 (C15-arom.), 125.51 (C1H-arom.), 122.95 (C18H-



arom.), 120.82 (C19H-arom.), 116.03 (C16H-arom.), 113.48 (C9H-arom.).









2-(7-methyl-1H-indol-3-yl)quinoline (Procedure 9)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.095


13 566
CA 3-67 Precipitate (yield = 48%)
IC50 (PSA) = 0.056













embedded image


tR (HPLC) = 3.10 min        MS (ESI+) m/z = 259.1255                 [(M + H)+] Mp = 146-150° C. HRMS (ESI+): calculated for C18H15N2, m/z = 259.1230; found, 259.1229 1H NMR (500 MHz, DMSO-d6): δ (ppm) = 11.63 (s, 1H), 8.72 (d, J = 7.9 Hz, 1H), 8.35 (d, J = 2.8 Hz, 1H), 8.25 (d, J = 8.7 Hz, 1H), 8.09 (d, J = 8.7 Hz, 1H), 8.03 (d, J = 8.3 Hz, 1H), 7.88 (d, J = 7.8 Hz, 1H), 7.74-7.68 (m, 1H),


(Yellow Solid)
7.48 (t, J = 7.4 Hz, 1H), 7.12 (t, J = 7.5 Hz, 1H), 7.02 (d, J = 7.0 Hz, 1H),



2.54 (s, 3H).




13C NMR (126 MHz, DMSO-d6): δ (ppm) = 156.14, 148.27, 137.19, 135.98,




129.77, 128.86, 128.08, 128.02, 126.28, 125.82, 125.31, 123.10, 121.27,



120.98, 120.70, 119.79, 116.41, 17.27.









2-(5-methyl-1H-indol-3-yl)quinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 3.2


13 577
CA 3-73 Precipitate (yield = 55%)
IC50 (PSA) = 1.73













embedded image


tR (HPLC) = 3.12 min        MS (ESI+) m/z = 259.1248                 [(M + H)+] HRMS (ESI+): calculated for C18H15N2, m/z = 259.1230; found, 259.1218 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 12.64 (s, 1H, H13), 8.97 (s, 1H, H12), 8.89 (d, J = 8.1 Hz, 1H, H10), 8.58 (d, J = 8.2 Hz, 1H, H3), 8.42 (d, J = 8.9 Hz, 1H, H9), 8.22 (d, J = 8.0 Hz, 1H, H6), 8.10 (s, 1H, H19), 8.02 (t, J = 7.6 Hz, 1H, H2), 7.77 (t, J = 7.5 Hz, 1H, H1), 7.52 (d, J = 8.3 Hz, 1H, H16), 7.18 (dd, J = 8.3, 0.9 Hz, 1H, H17), 2.51 (s, 3H, H20).


(Yellow Solid)

13C NMR = Done but unreadable and it was the same for every




compound made with this procedure









2-(6-fluoro-1H-indol-3-yl)quinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 0.144


13 576
CA 3-75 Precipitate2 (yield = 30%)
IC50 (PSA) = 0.048













embedded image


tR (HPLC) = 3.08 min         MS (ESI+) m/z = 263.1223                  [(M + H)+] Mp = 259-266° C. HRMS (ESI+): calculated for C17H11FN2Na, m/z = 285.0798; found, 285.0810 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 8.71 (s, 2H, H10, 12), 8.49 (s, 1H, H19), 8.31 (s, 2H, H3, 9), 8.14 (s, 1H, H6), 7.95 (s, 1H, H2), 7.71 (s,


(Yellow Solid)
1H, H1), 7.40 (d, J = 8.3 Hz, 1H, H16), 7.18 (t, J = 8.5 Hz, 1H, H18).




13C NMR = Done but unreadable and it was the same for every




compound made with this procedure, even proton spectra looked



bad.









2-(6-(trifluoromethyl)-1H-indol-3-yl)quinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 2.9


13 580
CA 3-78 Precipitate (yield = 8%)
IC50 (PSA) = Not Tested













embedded image


tR (HPLC) = 3.50 min        MS (ESI+) m/z = 313.0949                 [(M + H)+] HRMS (ESI+): calculated for C18H12F3N2, m/z = 313.0947; found, 313.0947 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 8.83 (s, 1H, H12), 8.75 (s, 2H, H10, 19), 8.31 (s, 2H, H3, 9), 8.11 (s, 1H, H6), 7.93 (s, 2H, H2, 16), 7.70 (s, 1H, H1), 7.58 (d, J = 7.9 Hz, 1H, H18).


(Yellow Solid)

13C NMR Done but unreadable and it was the same for every




compound made with this procedure, even proton spectra looked



bad.









2-(7-methyl-1H-indazol-1-yl)quinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 3.5


13 575
CA 3-90 F4-12 Precipitate (yield = 21%)
IC50 (PSA) = 1.36













embedded image


tR (HPLC) = 4.54 min           MS (ESI+) m/z = 260.1176                    [(M + H)+] Mp = 147-152° C. HRMS (ESI+): calculated for C17H14N3, m/z = 260.1182; found, 260.1172 1H NMR (500 MHz, DMSO-d6): δ (ppm) = 9.42 (s, 1H, H11), 8.69 (d, J = 8.8 Hz, 1H, H10), 8.49 (d, J = 8.8 Hz, 1H, H9), 8.12 (d, J = 8.0 Hz, 1H, H6), 8.09 (d, J = 8.5 Hz, 1H, H3), 7.89 (ddd, J = 8.0, 6.5, 1.0 Hz, 1H, H2), 7.71-7.65 (m,


(Pale Yellow Solid)
2H, H1, 9), 7.14 (d, J = 6.6 Hz, 1H, H17), 7.05 (dd, J = 8.3, 6.7 Hz, 1H, H18),



2.62 (s, 3H, H20).




13C NMR (126 MHz, DMSO-d6): δ (ppm) = 150.74 (C14-arom.), 150.56 (C8-




arom.), 146.38 (C4-arom.), 140.60 (C10H-arom.), 131.47 (C2H-arom.), 128.69



C6H-arom.), 128.66 (C3H-arom.), 127.92 (C5-arom.), 127.89 (C16-arom.),



127.33 (C1H-arom.), 126.89 (C17H-arom.), 123.64 (C18H-arom.), 122.62 (C15-



arom.), 121.65 (C11H-arom.), 119.49 (C19H-arom.), 113.50 (C9H-arom.), 17.22



(C20H3).









2-(6-(benzyloxy)-1H-indol-3-yl)quinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 5.3


13 589
CA 3-94 Precipitate (yield = 20%)
IC50 (PSA) = Not Tested













embedded image


tR (HPLC) = 3.66 min         MS (ESI+) m/z = 351.1707                  [(M + H)+] Mp = 264-269° C. HRMS (ESI+): calculated for C24H19N2O, m/z = 351.1492; found, 351.1494 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 12.50 (s, 1H, H13), 8.85 (s, 2H, H10), 8.52 (d, J = 5.6 Hz, 1H, H3), 8.37 (d, J = 8.7 Hz, 1H, H9), 8.20 (d, J = 7.2 Hz, 2H, H6, 19), 8.00 (t, J = 7.3 Hz, 1H, H2), 7.75 (t, J = 7.3 Hz, 1H, H1),


(Orange Solid)
7.51 (d, J = 7.2 Hz, 2H, H22, 26), 7.42 (t, J = 7.4 Hz, 2H, H23, 25), 7.35 (t, J = 7.3



Hz, 1H, H24), 7.19 (d, J = 1.7 Hz, 1H, H16), 7.06 (dd, J = 8.8, 2.0 Hz, 1H, H18),



5.21 (s, 2H, H27).




13C NMR Done but unreadable and it was the same for every




compound made with this procedure, even proton spectra looked



bad.









3-(pyridin-3-yl)-1H-pyrrolo[2,3-c]pyridine (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 4.9


13 581
CA 3-105 Purified (yield = 64%)
IC50 (PSA) = Not Tested













embedded image


tR (HPLC) = 1.45 min         MS (ESI+) m/z = 196.0861                  [(M + H)+] Mp = 71-80° C. HRMS (ESI+): calculated for C12H10N3, m/z = 196.0869; found, 196.0862 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 12.21 (s, 1H, H13), 8.99 (s, 1H, H3), 8.90 (s, 1H, H9), 8.49 (s, 1H, H2), 8.25 (s, 1H, H7), 8.21 (s, 1H, H14), 8.16- 8.12 (m, 1H, H5), 7.94 (d, J = 4.0 Hz, 1H, H12), 7.48 (dd, J = 7.7, 4.8 Hz, 1H,


(White Solid)
H6).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 147.26 (C3H-arom.), 146.80 (C2H-




arom.), 137.78 (C7H-arom.), 134.44 (C9H-arom.), 133.82 (C10-arom.), 133.41



(C5H-arom.), 130.47 (C4-arom.), 129.35 (C11-arom.), 128.95 (C14H-arom.),



123.95 (C6H-arom.), 113.91 (C12H-arom.), 111.96 (C15-arom.).









3-(pyridin-3-yl)-1H-indazole (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = No Data


13 590
CA 3-106 Precipitate (yield = 45%)
IC50 (PSA) = No Data













embedded image


tR (HPLC) = 2.53 min        MS (ESI+) m/z = 196..0889                 [(M + H)+] Mp = 176-179° C. HRMS (ESI+): calculated for C12H10N3, m/z = 196.0869; found, 196.0871 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 9.21 (d, J = 1.5 Hz, 1H, H5), 8.62 (dd, J = 4.7, 1.6 Hz, 1H, H2), 8.38 (td, J = 8.4, 1.8 Hz, 1H, H3), 8.12 (d, J = 8.2 Hz, 1H, H12), 7.64 (d, J = 8.4 Hz, 1H, H9), 7.56 (ddd, J = 7.9, 4.8, 0.7


(White Solid)
Hz, 1H, H1), 7.45 (ddd, J = 8.4, 7.2, 0.6 Hz, 1H, H8), 7.25 (ddd, J = 7.8,



6.6, 0.6 Hz, 1H, H8).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 148.59 (C2H-arom.), 147.42




(C5H-arom.), 141.50 (C10-arom.), 140.45 (C4-arom.), 133.90 (C3H-arom.),



129.63 (C15-arom.), 126.35 (C8H-arom.), 124.02 (C1H-arom.), 121.41



(C7H-arom.), 120.43 (C12H-arom.), 120.06 (C11-arom.), 110.72



(C9H-arom.).









2-(7-bromo-1H-indol-3-yl)quinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 0.052


13 582
CA 3-107 F9-17 Precipitate (yield = 20%)
IC50 (PSA) = 0.041













embedded image


tR (HPLC) = 3.25 min          MS (ESI+ ) m/z = 323.0177,                   325.0158 [(M + H)+] Mp = 178-180° C. HRMS (ESI+): calculated for C17H12BrN2, m/z = 323.0178, 325.0159; found, 323.0172, 325.0153 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.87 (s, 1H, H13), 8.94 (d, J = 7.9 Hz, 1H, H19), 8.42 (d, J = 2.8 Hz, 1H, H12), 8.29 (d, J = 8.6 Hz, 1H, H10),


(Pale Yellow Solid)
8.13 (d, J = 8.7 Hz, 1H, H9), 8.06 (d, J = 8.4 Hz, 1H, H3), 7.91 (d, J = 8.0 Hz,



1H, H6), 7.73 (ddd, J = 8.4, 7.2, 1.2 Hz, 1H, H2), 7.51 (ddd, J = 7.8, 6.6, 0.6



Hz, 1H, H1), 7.45 (dd, J = 7.5, 0.5 Hz, 1H, H17), 7.17 (t, J = 7.8 Hz, 1H, H18).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 155.00 (C8-arom.), 147.65 (C4-




arom.), 135.81 (C10H-arom.), 135.51 (C14H-arom.), 129.43 (C2H-arom.),



128.78 (C12H-arom.), 128.46 (C3H-arom.), 127.65 (C6H-arom.), 127.36 (C15-



arom.), 125.96 (C5-arom.), 125.19 (C1H-arom.), 124.73 (C17H-arom.), 122.17



(C19H-arom.), 121.76 (C18H-arom.), 119.31 (C9H-arom.), 116.67 (C11-arom.),



104.34 (C16-arom.).









2-(1H-pyrrolo[2,3-c]pyridin-3-yl)quinoline (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 1.1


13 583
CA 3-109 F22-31 Precipitate (yield = 19%)
IC50 (PSA) = 0.93













embedded image


tR (HPLC) = 2.52 min           MS (ESI+) m/z = 246.1028                    [(M + H)+] Mp = <270° C. HRMS (ESI+): calculated for C16H12N3, m/z = 246.1026; found, 246.1017 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 12.12 (s, 1H, H17), 8.85 (d, J = 0.8 Hz, 1H, H13), 8.72 (dd, J = 5.4, 0.9 Hz, 1H, H16), 8.58 (d, J = 2.4 Hz, 1H, H18), 8.31 (m, 2H, H10, 11), 8.09 (d, J = 8.7 Hz, 1H, H9), 8.07 (d, J = 8.3 Hz, 1H, H3),


(White Solid)
7.92 (d, J = 8.0 Hz, 1H, H6), 7.74 (ddd, J = 8.3, 6.9, 1.4 Hz, 1H, H2), 7.52 (ddd,



J = 7.8, 7.2, 1.2 Hz, 1H, H1).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 154.73 (C8-arom.), 147.73 (C4-




arom.), 139.35 (C11H-arom.), 136.01 (C10H-arom.), 134.88 (C13H-arom.), 134.37



(C14-arom.), 130.89 (C18H-arom.), 129.92 (C15-arom.), 129.51 (C2H-arom.),



128.46 (C3H-arom.), 127.69 (C6H-arom.), 125.97 (C5-arom.), 125.24 (C1H-



arom.), 119.03 (C9H-arom.), 116.77 (C16H-arom.), 115.22 (C19-arom.).









tert-butyl 3-iodo-1H-pyrrolo[2,3-b]pyridine-1-carboxylate















Intermediate
LabBook Code



CA 3-111 F1-14 (yield = 86%)







embedded image


tR (HPLC) = 4.66 min        MS (ESI+) m/z = 345.0074                 [(M + H)+] 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 8.44 (dd, J = 4.7, 1.5 Hz, 1H, H2), 8.03 (s, 1H, H8), 7.79 (dd, J = 7.9, 1.6 Hz, 1H, H6), 7.39 (dd, J = 7.9, 4.7 Hz, 1H, H1), 1.62 (s, 9H, H13, 14, 15). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 147.14 (C16 = O), 147.04 (C4- arom.), 146.16 (C2H-arom.), 131.54 (C8H-arom.), 130.04 (C6H-arom.), 125.25 (C5-arom.), 120.04 (C1H-arom.), 84.57 (C12-(CH3)3), 63.79 (C9-arom.), 28.08


(Brown Oil)
(C13, 14, 15H3).









3-(1H-pyrrolo[3,2-c]pyridin-3-yl)quinoline (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = Inactive


13 637
CA 3-115 Precipitate (yield = 51%)
IC50 (PSA) = Inactive













embedded image


tR (HPLC) = 2.22 min        MS (ESI+) m/z = 246.1020                 [(M + H)+] Mp = 233-239° C. HRMS (ESI+): calculated for C16H12N3, m/z = 246.1026; found, 246.1016 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 12.04 (s, 1H, H13), 9.43 (s, 1H, H12), 9.37 (d, J = 2.3 Hz, 1H, H5), 8.76 (d, J = 1.9 Hz, 1H, H3), 8.31 (d, J = 5.7 Hz, 1H, H8), 8.19 (d, J = 1.7 Hz, 1H, H14), 8.13 (d, J = 7.6 Hz, 1H, H19), 8.03


(White Solid)
(d, J = 8.3 Hz, 1H, H16), 7.72 (ddd, J = 8.4, 6.9, 1.4 Hz, 1H, H17), 7.63 (ddd,



J = 8.0, 7.2, 1.2 Hz, 1H, H18), 7.51 (dd, J = 5.7, 0.7 Hz, 1H, H9).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 150.40 (C5H-arom.), 146.38 (C2-




arom.), 142.88 (C12H-arom.), 141.29 (C8H-arom.), 140.94 (C10-arom.),



131.31 (C3H-arom.), 129.08 (C17H-arom.), 129.04 (C16H-arom.), 128.62 (C1-



arom.), 128.60 (C19H-arom.), 128.35 (C4-arom.), 127.31 (C18H-arom.),



126.19 (C14H-arom.), 122.63 (C11-arom.), 112.66 (C15-arom.), 107.80 (C9H-



arom.).









3-(5-bromo-2-methoxyphenyl)-1H-pyrrolo[3,2-c]pyri dine (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = Inactive


13 638
CA 3-116 Precipitate (yield = quant.)
IC50 (PSA) = Inactive













embedded image


tR (HPLC) = 2.91 min        MS (ESI+) m/z = 303.0118,                  305.0099 [(M + H)+] Mp = <270° C. HRMS (ESI+): calculated for C14H12BrN2O, m/z = 303.0128, 305.0108; found, 303.0119, 305.0100 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 12.03 (s, 1H, H13), 8.82 (d, J = 0.6 Hz, 1H, H12), 8.20 (d, J = 5.7 Hz, 1H, H8), 7.70 (d, J = 2.0 Hz, 1H, H14), 7.65 (d, J = 2.5 Hz, 1H, H2), 7.47 (dd, J = 8.8, 2.6 Hz, 1H, H6), 7.44 (dd, J = 5.7, 1.0 Hz, 1H, H9), 7.12 (d, J = 8.8 Hz, 1H, H3), 3.82 (s, 3H, H18).


(White Solid)

13C NMR (101 MHz, DMSO-d6): δ (ppm) = 155.97 (C5-arom.), 143.25




(C12H-arom.), 140.41 (C8H-arom.), 140.06 (C10-arom.), 132.27 (C3H-



arom.), 130.31 (C6H-arom.), 127.00 (C14H-arom.), 126.07 (C4-arom.),



123.24 (C11-arom.), 114.24 (C2H-arom.), 112.46 (C1-arom.), 110.90 (C15-



arom.), 107.57 (C9H-arom.), 56.13 (C18H3).









3-(7-bromo-1H-indol-3-yl)quinoline (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 1.13


13 653
CA 3-123 Precipitate (yield = 39%)
IC50 (PSA) = 0.29













embedded image


tR (HPLC) = 3.79 min       MS (ESI+) m/z = 323.0176,                 325.0157 [(M + H)+] Mp = 217-223° C. HRMS (ESI+): calculated for C17H12BrN2, m/z = 323.0178, 325.0159; found, 323.0179, 325.0160 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.86 (s, 1H, H13), 9.33 (d, J = 2.2 Hz, 1H, H5), 8.66 (d, J = 1.9 Hz, 1H, H3), 8.12-8.06 (m, 3H,


(Pale Yellow Solid)
H12,14,19), 8.03 (d, J = 8.3 Hz, 1H, H16), 7.72 (t, J = 8.2 Hz, 1H, H17),



7.63 (t, J = 7.4 Hz, 1H, H18), 7.47 (d, J = 7.5 Hz, 1H, H8), 7.14 (t, J =



7.8 Hz, 1H, H7).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 150.63 (C5H-arom.),




146.32 (C2-arom.), 135.72 (C10-arom.), 131.21 (C3H-arom.),



129.11 (C17H-arom.), 128.99 (C1-arom.), 128.86 (C12H-arom.),



128.57 (C4-arom.), 128.48 (C19H-arom.), 127.28 (C18H-arom.),



127.19 (C11-arom.), 126.42 (C14H-arom.), 125.01 (C8H-arom.),



121.96 (C7H-arom.), 119.28 (C12H-arom.), 114.08 (C15-arom.),



105.30 (C9-arom.).









3-(7-methyl-1H-indol-3-yl)quinoline (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.92


13 654
CA 3-125 Precipitate (yield = 56%)
IC50 (PSA) = 0.16













embedded image


tR (HPLC) = 3.43 min       MS (ESI+) m/z = 259.1236                 [(M + H)+] Mp = 215-219° C. HRMS (ESI+): calculated for C18H15N2, m/z = 259.1230; found, 259.1234 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.59 (s, 1H, H13), 9.34 (d, J = 2.3 Hz, 1H, H5), 8.62 (d, J = 2.1 Hz, 1H, H3), 8.07 (m, 2H, H14,19),


(White Solid)
8.01 (d, J = 8.4 Hz, 1H, H16), 7.92 (d, J = 7.9 Hz, 1H, H12), 7.69 (td,



J = 8.4, 1.5 Hz, 1H, H17), 7.61 (td, J = 8.1, 1.2 Hz, 1H, H18), 7.12



(t, J = 7.6 Hz, 1H, H7), 7.03 (d, J = 7.0 Hz, 1H, H8), 2.54 (s, 3H, H20).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 150.68 (C5H-arom.),




146.10 (C2-arom.), 136.96 (C10-arom.), 130.41 (C3H-arom.), 129.74



(C17H-arom.), 129.08 (C16H-arom.), 128.72 (C1-arom.), 128.64



(C4-arom.), 128.37 (C19H-arom.), 127.19 (C18H-arom.), 125.16 (C11-



arom.), 125.01 (C14H-arom.), 122.86 (C8H-arom.), 121.80 (C9-arom.),



120.77 (C7H-arom.), 117.24 (C12H-arom.), 113.06



(C15H-arom.), 17.30 (C20H3).









7-methyl-3-(pyridin-3-yl)-1H-indole (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 1.66


13 655
CA 3-127 F5 Precipitate (yield = 25%)
IC50 (PSA) = 0.61













embedded image


tR (HPLC) = 2.69 min         MS (ESI+) m/z = 209.1076                   [(M + H)+] Mp = 164-166° C. HRMS (ESI+): calculated for C14H13N2, m/z = 209.1073; found, 209.1075 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.49 (s, 1H, H13), 8.94 (d, J = 1.7 Hz, 1H, H5), 8.43 (dd, J = 4.7, 1.5 Hz, 1H, H2), 8.09 (dt, J = 8.0, 1.9 Hz, 1H, H3), 7.84 (d, J = 2.7 Hz, 1H, H14), 7.70 (d, J = 7.8 Hz, 1H,


(White Solid)
H12), 7.44 (ddd, J = 7.9, 4.8, 0.6 Hz, 1H), 7.08-6.96 (m, 2H, H7,8), 2.51



(s, 3H, H16).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 147.81 (C5H-arom.), 146.63




(C2H-arom.), 136.86 (C10-arom.), 133.75 (C3H-arom.), 132.32 (C4-arom.),



124.99 (C11-arom.), 124.40 (C14H-arom.), 124.28 (C1H-arom.), 122.66



(C8H-arom.), 121.74 (C9-arom.), 120.62 (C7H-arom.), 116.87 (C12H-



arom.), 113.02 (C15-arom.), 17.28 (C16H3).









tert-butyl 7-(benzyloxy)-3-iodo-1H-indole-1-carboxylate















Intermediate
LabBook Code



CA 3-128 F1-4 (yield = 88%)







embedded image

(Pale Orange Oil)

tR (HPLC) = 5.03 min         MS (ESI+) m/z = 450.0575                    [(M + H)+] 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 7.84 (s, 1H, H8), 7.57-7.52 (m, 2H, H14,18), 7.40-7.27 (m, 4H, H1,15,16,17), 7.11 (d, J = 7.6 Hz, 1H, H2), 6.98 (dd, J = 7.8, 0.8 Hz, 1H, H6), 5.25 (s, 2H, H12), 1.50 (s, 9H, H21,22,23). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 148.11 (C24O), 147.18 (C3- arom.), 137.44 (C13-arom.), 134.78 (C5-arom.), 132.89 (C8H-arom.), 128.67 (C15,17H-arom.), 128.16 (C16H-arom.), 127.88 (C14,18H-arom.), 124.89 (C1H-arom.), 124.45 (C4-arom.), 114.11 (C6H-arom.), 109.43 (C2H-arom.), 84.39 (C20(CH3)3), 70.58 (C12H2), 65.68 (C9-arom.), 27.68 (C21,22,23H3).









5,8-dibromo-2-(7-methyl-1H-indol-3-yl)quinoline (Procedure 9)
















VPC Number
LabBook Code
IC50 (eGFP) = Inactive


13 679
CA 3-137 F24-30 Precipitate (yield = 20%)
IC50 (PSA) = Inactive













embedded image


tR (HPLC) = 5.30 min          MS (ESI+) m/z =                     414.9448, 416.9430,                     418.9416 [(M + H)+] Mp = 218-221° C. HRMS (ESI+): calculated for C18H13Br2N2, m/z = 414.9440, 416.942., 418.9402; found, 414.9448, 416.9430, 418.9415 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.84 (s, 1H, H13), 9.01 (d, J = 7.9 Hz, 1H, H19), 8.54 (d, J = 2.9 Hz, 1H, H12), 8.38 (d, J = 9.0 Hz, 1H, H10), 8.33 (d, J = 9.0 Hz, 1H, H9), 8.04 (d, J = 8.1 Hz, 1H, H2),


(Yellow Solid)
7.73 (d, J = 8.1 Hz, 1H, H1), 7.16 (t, J = 7.6 Hz, 1H, H18), 7.05 (d,



J = 7.1 Hz, 1H, H17), 2.55 (s, 3H, H20).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 157.55 (C8-arom.), 145.79




(C4-arom.), 137.28 (C14-arom.), 135.21 (C10H-arom.), 133.70 (C2H-arom.),



129.80 (C12H-arom.), 129.33 (C1H-arom.), 126.24 (C5-arom.), 125.67



(C15-arom.), 124.03 (C3-arom.), 123.58 (C17H-arom.), 122.06 (C9H-arom.),



121.65 (C18H-arom.), 121.42 (C16-arom.), 121.18 (C6-arom., C19H-arom.),



115.73 (C11-arom.), 17.24 (C20H3).









5-bromo-2-(7-methyl-1H-indol-3-yl)quinoline (Procedure 9)
















VPC Number
LabBook Code
IC50 (eGFP) = Inactive


13 678
CA 3-139 F15-21 Precipitate (yield = 21%)
IC50 (PSA) = Inactive













embedded image


tR (HPLC) = 4.55 min          MS (ESI+) m/z = 337.0363,                    339.0354 [(M + H)+] Mp = 200-204° C. HRMS (ESI+): calculated for C18H14BrN2, m/z = 337.0335, 339.0316; found, 337.0345, 339.0331 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.74 (s, 1H, H13), 8.69 (d, J = 8.0 Hz, 1H, H19), 8.42 (d, J = 3.0 Hz, 1H, H12), 8.36 (dd, J = 9.0, 0.7 Hz, 1H, H10), 8.23 (d, J = 9.0 Hz, 1H, H9), 8.06 (dt, J = 8.4, 0.9 Hz, 1H, H1), 7.81 (dd, J = 7.5, 1.0 Hz, 1H, H3), 7.64 (dd, J = 8.4, 7.6 Hz,


(Pale Yellow Solid)
1H, H2), 7.13 (t, J = 7.6 Hz, 1H, H18), 7.03 (d, J = 7.0 Hz, 1H, H17),



2.54 (s, 3H, H20).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 156.97 (C8-arom.), 149.20




(C4-arom.), 137.24 (C14-arom.), 134.47 (C10H-arom.), 130.54 (C2H-arom.),



129.10 (C1H-arom.), 129.01 (C3H-arom.), 128.88 (C12H-arom.), 125.74



(C5-arom.), 125.10 (C15-arom.), 123.32 (C17H-arom.), 121.45 (C9H-arom.),



121.43 (C16-arom.), 121.37 (C6-arom.), 121.24 (C18H-arom.), 120.60



(C19H-arom.), 115.71 (C11-arom.), 17.25 (C20H3).









3-iodo-7-methyl-1-tosyl-1H-indole















Intermediate
LabBook Code



CA 3-140 P1-3 (yield = 48%)







embedded image

(White Solid)

tR (HPLC) = 5.50 min          MS (ESI+) m/z = 411.9835                   [(M + H)+] 1H NMR (500 MHz, DMSO-d6): δ (ppm) = 8.07 (s, 1H, H8), 7.68 (d, J = 8.3 Hz, 2H, H13,17), 7.41 (d, J = 8.1 Hz, 2H, H14,16), 7.29-7.21 (m, 2H, H6,1), 7.17 (d, J = 6.7 Hz, 1H, H2), 2.49 (s, 3H, H11), 2.35 (s, 3H, H18). 13C NMR (126 MHz, DMSO-d6): δ (ppm) = 145.86 (C15-arom.), 135.85 (C12-arom.), 134.57 (C5-arom.), 134.23 (C4-arom.), 133.76 (C8H-arom.), 130.85 (C14,16H-arom.), 129.76 (C2H-arom.), 126.92 (C13,17H-arom.), 125.12 (C1H-arom.), 124.81 (C3-arom.), 120.38 (C6H-arom.), 69.54 (C9- arom.), 21.53 (C18H3), 21.47 (C11H3).









8-bromo-2-(7-methyl-1H-indol-3-yl)quinoline (Procedure 9)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.156


13 677
CA 3-141 F34-54 Precipitate (yield = 20%)
IC50 (PSA) = 0.11













embedded image


tR(HPLC) = 5.03 min         MS (ESI+) m/z = 337.0361,                   339.0345 [(M + H)+] Mp = 214-217° C. HRMS (ESI+): calculated for C18H14BrN2, m/z = 337.0335, 339.0316; found, 337.0341, 339.0324 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.72 (s, 1H, H13), 9.04 (d, J = 8.0 Hz, 1H, H19), 8.47 (d, J = 3.0 Hz, 1H, H12), 8.30 (d, J = 8.8 Hz,


(Yellow Solid)
1H, H10), 8.20 (d, J = 8.7 Hz, 1H, H9), 8.09 (dd, J = 7.5, 1.3 Hz, 1H,



H2), 7.92 (dd, J = 8.1, 1.2 Hz, 1H, H6), 7.39 (t, J = 7.8 Hz, 1H, H1),



7.14 (t, J = 7.4 Hz, 1H, H18), 7.03 (d, J = 7.0 Hz, 1H, H17),



2.54 (s, 3H, H20).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 156.88 (C8-arom.), 144.96




(C4-arom.), 137.23 (C14-arom.), 136.61 (C10H-arom.), 133.25 (C2H-



arom.), 128.92 (C12H-arom.), 128.20 (C6H-arom.), 127.68 (C5-arom.),



125.91 (C1H-arom.), 125.77 (C15-arom.), 123.97 (C3-arom.), 123.36



(C17H-arom.), 121.38 (C18H-arom.), 121.33 (C19H-arom.), 121.23 (C16-



arom.), 120.45 (C9H-arom.), 116.31 (C11-arom.), 17.25 (C20H3).









3-(naphthalen-2-yl)-1H-pyrrolo[2,3-c]pyridine (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.45


13 675
CA 3-144 Precipitate (yield = 83%)
IC50 (PSA) = 0.468













embedded image


tR (HPLC) = 3.26 min       MS (ESI+) m/z = 245.1334                 [(M + H)+] Mp = 243-247° C. HRMS (ESI+): calculated for C17H13N2, m/z = 245.1073; found, 245.1079 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.99 (s, 1H, H13), 8.86 (s, 1H, H9), 8.27 (s, 1H, H3), 8.25 (d, J = 5.2 Hz, 1H, H7), 8.17 (s, 1H, H14), 8.05 (dd, J = 5.6, 1.0 Hz, 1H, H12), 8.02 (d, J = 8.1 Hz, 1H, H19), 8.00-


(Pale Yellow Solid)
7.90 (m, 3H, H5,6,16), 7.53 (ddd, J = 8.1, 6.8, 1.4 Hz, 1H, H18), 7.47



(ddd, J = 8.0, 6.9, 1.3 Hz, 1H, H17).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 139.14 (C7H-arom.), 135.56




(C9H-arom.), 134.64 (C10-arom.), 134.14 (C1-arom.), 132.82 (C4-arom.),



131.87 (C2-arom.), 129.56 (C11-arom.), 128.76 (C6H-arom.), 128.43



(C14H-arom.), 128.18 (C19H-arom.), 127.96 (C16H-arom.), 126.72



(C18H-arom.), 126.01 (C17H-arom.), 125.73 (C5H-arom.), 124.12 (C3H-



arom.), 115.47 (C15-arom.), 114.55 (C12H-arom.).









3-(naphthalen-2-yl)-1H-pyrrolo[2,3-b]pyridine (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.053


13 676
CA 3-146 Precipitate (yield = 61%)
IC50 (PSA) = 0.034













embedded image


tR (HPLC) = 4.50 min       MS (ESI+) m/z = 245.1077                 [(M + H)+] Mp = 207-211° C. HRMS (ESI+): calculated for C17H13N2, m/z = 245.1073; found, 245.1077 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 12.01 (s, 1H, H13), 8.50 (dd, J = 8.0, 1.1 Hz, 1H, H12), 8.32 (dd, J = 4.6, 1.5 Hz, 1H, H8), 8.27 (s, 1H, H3), 8.06 (d, J = 2.7 Hz, 1H, H14), 8.00 (d, J = 8.0 Hz, 1H, H19), 7.97-


(Yellow Solid)
7.92 (m, 2H, H5,6), 7.91 (d, J = 8.0 Hz, 1H, H16), 7.52 (ddd, J = 8.2,



6.9, 1.4 Hz, 1H, H18), 7.47 (ddd, J = 8.0, 6.9, 1.3 Hz, 1H, H17),



7.22 (dd, J = 8.0, 4.6 Hz, 1H, H7).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 149.69 (C10-arom.), 143.50




(C8H-arom.), 134.16 (C1-arom.), 133.12 (C4-arom.), 131.85 (C2-arom.),



128.70 (C6H-arom.), 128.31 (C12H-arom.), 128.17 (C19H-arom.), 127.94



(C16H-arom.), 126.68 (C18H-arom.), 125.89 (C17H-arom.), 125.66 (C5H-



arom.), 124.90 (C14H-arom.), 123.88 (C3H-arom.), 117.81 (C11-arom.),



116.62 (C7H-arom.), 114.55 (C15-arom.).









2-(5-bromo-1H-indol-3-yl)quinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 2.6


13 683
CA 3-147 F36-46 Precipitate (yield = 39%)
IC50 (PSA) = 1.906













embedded image

(Yellow Solid)

tR (HPLC) = 3.60 min       MS (ESI+) m/z = 323.0169,                 325.0153 [(M + H)+] Mp = 200-203° C. HRMS (ESI+): calculated for C17H12BrN2, m/z = 323.0178, 325.0159; found, 323.0184, 325.0169 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.86 (s, 1H, H13), 9.06 (d, J = 2.0 Hz, 1H, H19), 8.42 (d, J = 2.8 Hz, 1H, H12), 8.27 (d, J = 8.5 Hz, 1H, H10), 8.05 (d, J = 8.8 Hz, 1H, H9), 8.02 (d, J = 9.0 Hz, 1H, H3), 7.89 (dd, J = 8.1, 1.2 Hz, 1H, H6), 7.72 (ddd, J = 8.4, 6.9, 1.5 Hz, 1H, H6), 7.50 (ddd, J = 8.0, 6.9, 1.2 Hz, 1H, H1), 7.45 (dd, J = 8.4, 0.4 Hz, 1H, H17), 7.34 (dd, J = 8.6, 2.0 Hz, 1H, H17). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 155.03 (C8-arom.), 147.62 (C4-arom.), 135.92 (C10H-arom.), 135.83 (C14-arom.), 129.50 (C2H-arom.), 129.15 (C12H-arom.), 128.36 (C3H-arom.), 127.67 (C6H-arom.), 127.30 (C15-arom.), 125.88 (C5-arom.), 125.12 (C1H-arom.), 124.71 (C19H-arom.), 124.62 (C17H-arom.), 119.07 (C9H-arom.), 115.02 (C11-arom.), 113.79(C18-arom.), 113.07 (C16H-arom.).









3-(1H-indazol-3-yl)quinoline (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 1.4


13 684
CA 4-13 F3-5 (yield = 46%)
IC50 (PSA) = 6.609













embedded image

(White Solid)

tR (HPLC) = 3.59 min    MS (ESI+) m/z = 246.1322              [(M + H)+] Mp = 212-215° C. HRMS (ESI+): calculated for C16H12N3, m/z = 246.1026; found, 246.1027 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 13.53 (s, 1H, H13), 9.60 (d, J = 2.2 Hz, 1H, H5), 8.98 (d, J = 2.0 Hz, 1H, H3), 8.33 (d, J = 8.2 Hz, 1H, H12), 8.21 (d, J = 7.9 Hz, 1H, H19), 8.09 (d, J = 8.3 Hz, 1H, H16), 7.8.79 (ddd, J = 8.4, 7.2, 1.2 Hz, 1H, H17), 7.71-7.66 (m, 2H, H9,18), 7.48 (t, J = 7.4 Hz, 1H, H8), 7.31 (t, J = 7.5 Hz, 1H, H7). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 149.67 (C5H-arom.), 147.27 (C2-arom.), 142.03 (s C10-arom.), 141.01 (C1-arom.), 132.67 (C3H-arom.), 129.94 (C17H-arom.), 129.20 (C16H-arom.), 129.01 (C19H-arom.), 128.24 (C4-arom.), 127.52 (C18H-arom.), 127.29 (C15-arom.), 126.96 (C8H-arom.), 121.96 (C7H-arom.), 121.23 (C12H-arom.), 120.81 (C11-arom.), 111.26 (C9H-arom.).









3-(naphthalen-2-yl)-1H-pyrrolo[3,2-c]pyridine (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = Inactive


13 685
CA 4-15 Precipitate2 (yield = 71%)
IC50 (PSA) = Inactive













embedded image

(Pale Orange Solid)

tR (HPLC) = 3.17 min       MS (ESI+) m/z = 245.1082                  [(M + H)+] Mp = <270° C. HRMS (ESI+): calculated for C17H13N2, m/z = 245.1073; found, 245.1073 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.85 (s, 1H, H13), 9.39 (s, 1H, H12), 8.33 (s, 1H, H3), 8.28 (d, J = 5.6 Hz, 1H, H8), 8.05 (d, J = 8.0 Hz, 1H, H19), 8.02-7.94 (m, 3H, H4,6,14), 7.92 (d, J = 8.0 Hz, 1H, H16), 7.53 (ddd, J = 8.0, 7.2, 1.6 Hz, 1H, H18), 7.51-7.45 (m, 2H, H9,17). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 142.94 (C12H-arom.), 141.01 (C8H-arom.), 140.93 (C10-arom.), 134.16 (C1-arom.), 132.62 (C4-arom.), 131.97 (C2-arom.), 128.76 (C6H-arom.), 128.30 (C19H-arom.), 127.92 (C16H-arom.), 126.71 (C18H-arom.), 126.21 (C17H-arom.), 125.79 (C5H- arom.), 125.55 (C14H-arom.), 124.55 (C3H-arom.), 115.92 (C15-arom.), 107.71 (C9H-arom.).









2-phenyl-1H-benzo[d]imidazole
















VPC Number
LabBook Code
IC50 (eGFP) = Inactive


13 686
CA 4-16 F3-14 Precipitate (yield = 22%)
IC50 (PSA) = Inactive













embedded image


tR (HPLC) = 2.39 min         MS (ESI+) m/z = 195.1040                   [(M + H)+] Mp = <270° C. HRMS (ESI+): calculated for C13H11N2, m/z = 195.0917; found, 195.0919 1H NMR (400 MHz, DMOS-d6): δ (ppm) = 12.91 (s, 1H, H13), 8.22-8.17


(Pink Solid)
(m, 2H, H3,5), 7.67 (br s, 1H, H9), 7.59-7.47 (m, 4H, H1,2,6,12), 7.22-7.19



(m, 2H, H7,8).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 151.19 (C14-arom.), 143.79




(C10-arom.), 134.98 (C11-arom.), 130.15 (C4-arom.), 129.81 (C2H-arom.),



128.92 (C1,6H-arom.), 126.40 (C3,5H-arom.), 122.50 (C7H-arom.), 121.64



(C8H-arom.), 118.85 (C9H-arom.), 111.30 (C12H-arom.).









2-naphthalen-3-ol-1H-benzo[d]imidazole
















VPC Number
LabBook Code
IC50 (eGFP) = Inactive


13 687
CA 4-17 Precipitate2 (yield = 14%)
IC50 (PSA) = Inactive













embedded image


tR (HPLC) = 3.32 min        MS (ESI+) m/z = 261.1080                  [(M + H)+] Mp = <270° C. HRMS (ESI+): calculated for C17H13N2O, m/z = 261.1022; found, 261.1022 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 13.46 (s, 1H, H20), 13.01 (s, 1H, H13), 8.72 (s, 1H, H3), 7.90 (d, J = 8.2 Hz, 1H, H19), 7.79 (d, J = 8.4 Hz, 1H, H16), 7.74 (br s, 2H, , H9,12), 7.51 (t, J = 7.5 Hz, 1H, H17), 7.43 (s, 1H, H6), 7.39 (t, J = 7.5 Hz, 1H, H18), 7.34 (br s, 2H, H7,8). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 154.60 (C5-arom.), 151.15 (C14- arom.), 141.03 (C10-arom.), 135.16 (C2-arom.), 133.41 (C11-arom.), 128.13



(C19H-arom.), 127.65 (C17H-arom.), 126.99 (C1-arom.), 126.80 (C3H-arom.),



126.05 (C16H-arom.), 123.77 (C18H-arom.), 123.60 (C7H-arom.), 122.57



(C8H-arom.), 118.21 (C9H-arom.), 115.21 (C4-arom.), 111.72 (C12H-arom.),



110.80 (C6H-arom.).









tert-butyl 3-iodo-7-nitro-1H-indole-1-carboxylate















Intermediate
LabBook Code



CA 4-18 F4-18 (yield = 90%)







embedded image


tR (HPLC) = 5.24 min      MS (ESI+) m/z = 410.9828 [(M + Na)+] 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 8.10 (s, 1H, H8), 7.99 (dd, J = 7.9, 0.7 Hz, 1H, H2), 7.78 (dd, J = 7.9, 1.0 Hz, 1H, H6), 7.56 (t, J = 7.9 Hz, 1H, H1), 1.56 (s, 9H, H13,14,15). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 147.76 (C16O), 138.62 (C3- arom.), 135.66 (C5-arom.), 134.29 (C8H-arom.), 127.30 (C6H-arom.), 124.77 (C4-arom.), 124.25 (C1H-arom.), 121.63 (C2H-arom.), 86.64 (C12(CH3)3), 66.56 (C9-arom.), 27.76 (C13,14,15H3).









3-((2H-tetrazol-5-yl)methyl)-1H-indole
















VPC Number
LabBook Code
IC50 (eGFP) = Inactive


13 700
CA 4-21 F3-4 (yield = 66%)
IC50 (PSA) = Inactive













embedded image


tR (HPLC) = 2.80 min        MS (ESI+) m/z = 200.0936                   [(M + H)+] Mp = 174-181° C. HRMS (ESI+): calculated for C10H10N5, m/z = 200.0931; found, 200.0929 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.03 (s, 1H, H9), 7.43 (d, J = 8.0 Hz, 1H, H6), 7.38 (d, J = 8.1 Hz, 1H, H3), 7.27 (d, J = 2.4 Hz, 1H, H8), 7.09 (ddd, J = 8.0, 7.2, 1.2 Hz, 1H, H5), 6.98 (ddd, J = 7.9, 7.1, 1.0 Hz, 1H, H4), 4.38 (d, J = 0.6 Hz, 2H, H10). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 156.20 (C11-arom.), 136.70 (C2- arom.), 126.98 (C8H-arom.), 124.34 (C1-arom.), 121.75 (C4H-arom.), 119.11 (C5H-arom.), 118.57 (C6H-arom.), 112.02 (C3H-arom.), 108.78 (C7-arom.), 19.99 (C10H2).









3-(2H-tetrazol-5-yl)-1H-indole
















VPC Number
LabBook Code
IC50 (eGFP) = Inactive


13 701
CA 4-22 F9-16 (yield = 33%)
IC50 (PSA) = Inactive













embedded image


tR (HPLC) = 2.86 min       MS (ESI+) m/z = 186.2227                 [(M + H)+] Mp = 220-224° C. HRMS (ESI+): calculated for C9H8N5, m/z = 186.0774; found, 186.0776 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.88 (s, 1H, H9), 8.25-8.22 (m, 1H, H6), 8.11 (d, J = 2.9 Hz, 1H, H11), 7.57-7.53 (m, 1H, H3), 7.28- 7.20 (m, 2H, H4,5). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 151.72 (C10-arom.), 136.86 (C2H-arom.), 127.53 (C8H-arom.), 124.91 (C1-arom.), 123.08 (C4H-arom.), 121.27 (C5H-arom.), 120.77 (C6H-arom.), 112.73 (C3H-arom.), 99.91 (C7- arom.).









tert-butyl 3-iodo-7-methyl-1H-indole-1-carboxylate















Intermediate
LabBook Code



CA 4-23 P1-3 (yield = 81%)







embedded image


tR (HPLC) = 5.78 min        MS (ESI+) m/z = 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 7.88 (s, 1H, H8), 7.30-7.19 (m, 3H, H1,2,6), 2.54 (s, 3H, H11), 1.61 (s, 9H, H14,15,16). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 148.55 (C17O), 134.13 (C4- arom.), 133.33 (C5-arom.), 132.74 (C8H-arom.), 128.83 (C2H-arom.), 125.22 (C3-arom.), 124.29 (C1H-arom.), 119.45 (C6H-arom.), 84.70 (C13(CH3)3), 66.84 (C9-arom.), 27.90 (C14,15,16H3), 21.68 (C11H3).









tert-butyl 3-iodo-H-pyrrolo[3,2-b]pyridine-1-carboxylate















Intermediate
LabBook Code



CA 4-24 F1-6 (yield = 77%)







embedded image


tR (HPLC) = 4.59 min     MS (ESI+) m/z = 345.0111              [(M + H)+] 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 8.56 (dd, J = 4.7, 1.4 Hz, 1H, H1), 8.32 (dd, J = 8.3, 1.3 Hz, 1H, H3), 8.19 (s, 1H, H8), 7.43 (dd, J = 8.3, 4.7 Hz, 1H, H2), 1.64 (s, 9H, H13,14,15). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 148.26 (C16O), 147.90 (C4- arom.), 146.39 (C1H-arom.), 133.51 (C8H-arom.), 128.04 (C5-arom.), 122.61 (C3H-arom.), 120.60 (C2H-arom.), 85.59 (C12(CH3)3), 69.42 (C9-arom.), 28.05 (C13,14,15H3).









3-(naphthalen-2-yl)-7-nitro-1H-indole (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.2


13 702
CA 4-27 F20-51 Precipitate3 (yield = 56%)
IC50 (PSA) = 0.14













embedded image


tR (HPLC) = 4.40 min             MS (ESI+) m/z = 289.0915                      [(M + H)+] Mp = 166-171° C. HRMS (ESI+): calculated for C18H13N2O2, m/z = 289.0972; found, 289.0975 1H NMR (400 MHz, CDCl3): δ (ppm) = 10.13 (s, 1H, H13), 8.38 (d, J = 7.8 Hz, 1H, H12), 8.28 (d, J = 8.1 Hz, 1H, H8), 8.11 (s, 1H, H3), 7.99 (d, J = 8.4 Hz, 1H, H6), 7.95-7.90 (m, 2H, H16,19), 7.78 (dd, J = 8.5, 1.8 Hz, 1H, H5), 7.67 (d, J = 2.4 Hz, 1H, H14), 7.59-7.50 (m, 2H, H17,18), 7.35 (t, J = 8.0 Hz, 1H, H7).




13C NMR (101 MHz, CDCl3): δ (ppm) = 133.82 (C4-arom.), 133.21 (C9-




arom.), 132.41 (C2-arom.), 131.32 (C1-arom.), 130.08 (C10-arom.), 129.92



(C11-arom.), 128.67 (C6H-arom.), 128.16 (C12H-arom.), 127.83 (C19H-



arom.), 127.78 (C19H-arom.), 126.48 (C5H-arom.), 126.42 (C18H-arom.),



126.14 (C3H-arom.), 125.86 (C17H-arom.), 124.23 (C14H-arom.), 119.88



(C15-arom.), 119.81 (C7H-arom.), 119.77 (C8H-arom.).









3-(naphthalen-2-yl)-1H-pyrrolo[3,2-b]pyridine (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.1


13 703
CA 4-28 Precipitate (yield = 84%)
IC50 (PSA) = 0.097













embedded image


tR (HPLC) = 4.28 min           MS (ESI+) m/z = 245.1068                    [(M + H)+] Mp = 221-224° C. HRMS (ESI+): calculated for C17H13N2, m/z = 245.1073; found, 245.1068 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.66 (s, 1H, H14), 8.97 (d, J = 0.8 Hz, 1H, H3), 8.53 (dd, J = 4.6, 1.5 Hz, 1H, H7), 8.35 (dd, J = 8.6, 1.7 Hz, 1H, H5), 8.33 (d, J = 2.9 Hz, 1H, H14), 7.95-7.90 (m, 2H, H6,19), 7.89-7.84 (m, 2H, H9,16), 7.50 (ddd, J = 8.2, 6.9, 1.4 Hz, 1H, H18), 7.44 (ddd, J = 8.0, 6.9, 1.3 Hz, 1H, H17), 7.22 (dd, J = 8.2, 4.6 Hz, 1H, H8).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 144.11 (C11-arom.), 143.30




(C7H-arom.), 134.01 (C1-arom.), 132.82 (C4-arom.), 131.77 (C2-arom.),



130.16 (C10-arom.), 128.07 (C6,16H-arom.), 128.06 (C19H-arom.), 127.67



(C14H-arom.), 126.53 (C18H-arom.), 125.51 (C5H-arom.), 125.34 (C17H-



arom.), 123.77 (C3H-arom.), 119.47 (C9H-arom.), 117.21 (C8H-arom.),



114.52 (C15-arom.).









7-bromo-3-(naphthalen-2-yl)-1H-indole (Procedure 10)
















LabBook Code



CA 4-29 P2 F3-7 (yield = 12%)







embedded image


tR (HPLC) = 5.13 min        MS (ESI+) m/z = 323.0095,                 325.0076 [(M + H)+] 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.70 (s, 1H, H13), 8.24 (s, 1H, H3), 8.07 (d, J = 8.0 Hz, 1H, H12), 8.00 (d, J = 8.3 Hz, 1H, H19), 7.98 (d, J = 8.6 Hz, 1H, H6), 7.94-7.89 (m, 3H, H5,14,16), 7.53 (ddd, J = 8.1, 6.7, 1.4 Hz, 1H, H18), 7.48 (ddd, J = 8.1, 6.8, 1.3 Hz, 1H, H17), 7.44 (d, J = 7.4 Hz, 1H, H8), 7.12 (t, J = 7.8 Hz, 1H, H7). 13C NMR → n.d.









3-(naphthalen-2-yl)-1H-indol-7-amine
















LabBook Code



CA 4-34 F6-10 (yield = 28%)







embedded image


tR (HPLC) = 4.04 min        MS (ESI+) m/z = 259.1295                 [(M + H)+] 1H NMR (400 MHz, CDCl3) δ (ppm) = 8.22 (s, 1H, H13), 8.18 (s, 1H, H7), 7.96-7.88 (m, 3H, H3,6,10), 7.85 (dd, J = 8.5, 1.7 Hz, 1H, H9), 7.62 (d, J = 7.9 Hz, 1H, H19), 7.57-7.49 (m, 2H, H1,2), 7.36 (s, 1H, H12), 7.21 (t, J = 7.8 Hz, 1H, H18), 6.69 (d, J = 7.5 Hz, 1H, H17). 13C NMR → n.d.









tert-butyl 7-methyl-3-((trimethylsilyl)ethynyl)-1H-indole-1-carboxylate















Intermediate
LabBook Code



CA 4-35 F5-7 (yield = Quant %)







embedded image


tR (HPLC) = 5.48 min          MS (ESI+) m/z = 1H NMR (400 MHz, CDCl3): δ (ppm) = 7.77 (s, 1H, H8), 7.54 (d, J = 7.6 Hz, 1H, H6), 7.25 (t, J = 7.5 Hz, 1H, H1), 7.18 (d, J = 7.3 Hz, 1H, H2), 2.67 (s, 3H), 1.66 (s, 9H), 0.33 (s, 9H). 13C NMR (101 MHz, CDCl3): δ (ppm) = 148.78 (C22O), 134.06 (C4-arom.), 131.84 (C5-arom.), 131.67 (C8H-arom.), 128.58 (C2H-arom.), 125.44 (C3- arom.), 123.61 (C1H-arom.), 117.80 (C6H-arom.), 103.32 (C9-arom.), 97.93 (C12≡), 96.91 (C10≡), 83.94 (C18(CH3)3), 28.01 (C19,20,21H3), 22.09 (C11H3), 0.14 (C14,15,16H3).









3-([1,1′-biphenyl]-4-yl)-7-methyl-1H-indole (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 3.815


13 733
CA 4-38 Precipitate (yield = 25 %)
IC50 (PSA) = 0.919













embedded image


tR (HPLC) = 4.50 min           MS (ESI−) m/z = 282.1207                     [(M + H)] Mp = 199-202° C. HRMS (ESI−): calculated for C21H16N, m/z = 282.1288; found, 282.1286 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.38 (s, 1H, H13), 7.84-7.79 (m, 2H, H3,5), 7.78-7.70 (m, 6H, H1,6,12,14,18,22), 7.52-7.46 (m, 2H, H19,21), 7.40-7.34 (m, 1H, H20), 7.04 (t, J = 7.2 Hz, 1H, H7), 6.98 (d, J = 7.0 Hz, 1H, H8), 2.52 (s, 3H, H17). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 140.51 (C16-arom.), 137.29 (C2- arom.), 136.90 (C10-arom.), 135.75 (C4-arom.), 129.40 (C19,21H-arom.), 127.57 (C20H-arom.), 127.43 (C1,6H-arom.), 127.33 (C3,5H-arom.), 126.79 (C18,22H-arom.), 125.14 (C11-arom.), 123.85 (C14H-arom.), 122.44 (C8H-



arom.), 121.62 (C9-arom.), 120.37 (C7H-arom.), 117.16 (C12H-arom.),



116.06 (C15-arom.), 17.31 (C17H3).









3-([1,1′-biphenyl]-4-yl)-1H-pyrrolo[2,3-b]pyridine (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 4.08


13 715
CA 4-39 Precipitate3 (yield = 51%)
IC50 (PSA) = 0.35













embedded image


tR (HPLC) = 4.23 min           MS (ESI−) m/z = 271.1232                    [(M + H)+] Mp = <270° C. HRMS (ESI+): calculated for C19H15N2, m/z = 271.1230; found, 271.1232 1H NMR (500 MHz, DMSO-d6): δ (ppm) = 11.97 (s, 1H, H13), 8.35 (d, J = 7.9 Hz, 1H, H12), 8.30 (dd, J = 4.6, 1.4 Hz, 1H, H8), 7.96 (d, J = 2.6 Hz, 1H, H14), 7.84 (d, J = 8.3 Hz, 2H, H3,5), 7.79-7.71 (m, 4H, H1,6,17,21), 7.49 (t, J = 7.7 Hz, 2H, H20,18), 7.38 (t, J = 7.4 Hz, 1H, H19), 7.19 (dd, J = 7.9, 4.6 Hz, 1H, H7). 13C NMR (126 MHz, DMSO-d6): δ (ppm) = 149.60 (C10-arom.), 143.42 (C8- arom.), 140.39 (C16-arom.), 137.73 (C2-arom.), 134.78 (C4-arom.), 129.43 (C18,20H-arom.), 128.02 (C12H-arom.), 127.68 (C19H-arom.), 127.55 (C1,6H-



arom.), 127.11 (C3,5H-arom.), 126.84 (C17,21H-arom.), 124.41 (C14H-arom.),



117.74 (C11H-arom.), 116.57 (C7H-arom.), 114.24 (C15-arom.).









3-(4-bromophenyl)-1H-pyrrolo[2,3-b]pyridine (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.067


13 716
CA 4-40 Precipitate (yield = 37%)
IC50 (PSA) = 0.058













embedded image


tR (HPLC) = 3.96 min          MS (ESI−) m/z = 273.0029,                   275.0010 [(M + H)+] Mp = 262-266° C. HRMS (ESI+): calculated for C13H10BrN2, m/z = 273.0022, 275.0002; found, 273.0024, 275.0005 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 12.00 (s, 1H, H13), 8.30-8.27 (m, 2H, H8,12), 7.95 (d, J = 2.7 Hz, 1H, H14), 7.72-7.68 (m, 2H, H1,6), 7.63- 7.59 (m, 2H, H3,5), 7.20-7.15 (m, 1H, H7). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 149.54 (C10-arom.), 143.52 (C8H-arom.), 134.83 (C4-arom.), 132.14 (C3,5H-arom.), 128.60 (C1,6H-



arom.), 127.89 (C12H-arom.), 124.70 (C14H-arom.), 118.79 (C2-arom.),



117.47 (C11-arom.), 116.64 (C7H-arom.), 113.46 (C15-arom.).









3-([1,1′-biphenyl]-3-yl)-1H-pyrrolo[2,3-b]pyridine (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 11.01


13 734
CA 4-48 Precipitate (yield = 39%)
IC50 (PSA) = 4.129













embedded image


tR (HPLC) = 4.34 min          MS (ESI−) m/z = 271.1226                   [(M + H)+] Mp = 182-185° C. HRMS (ESI+): calculated for C19H15N2, m/z = 271.1230; found, 271.1227 1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.97 (s, 1H, H13), 8.34 (dd, J = 8.0, 1.5 Hz, 1H, H12), 8.30 (dd, J = 4.6, 1.5 Hz, 1H, H8), 8.01 (s, 1H, H14), 7.95 (d, J = 0.7 Hz, 1H, H3), 7.80-7.75 (m, 2H, H17,21), 7.74-7.71 (m, 1H, H5), 7.57-7.47 (m, 4H, H2,6,18,20), 7.43-7.39 (m, 1H, H19), 7.18 (dd, J = 7.9, 4.7 Hz, 1H, H7). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 149.56 (C10-arom.), 143.39



(C8H-arom.), 141.37 (C1-arom.), 140.88 (C16-arom.), 136.18 (C4-arom.),



129.97 (C6H-arom.), 129.38 (C18,20H-arom.), 127.94 (C12,19H-arom.), 127.37



(C17,21H-arom.), 125.87 (C5H-arom.), 125.07 (C3H-arom.), 124.62 (C2,14H-



arom.), 117.79 (C11-arom.), 116.59 (C7H-arom.), 114.66 (C15-arom.).









4-(4-bromothiazol-2-yl)morpholine















LabBook Code




CA 4-50 Ap Tmt (yield = Quant



Intermediate
%)









embedded image

  (Beige Solid)

tR (HPLC) = 3.44 min
MS (ESI+) m/z = 248.9720; 250.9700 [(M + H)+]













1H NMR (400 MHz, DMSO-d6): δ (ppm) = 6.92 (s, 1H, H2),




3.72-3.67 (m, 4H, H8,10), 3.38-3.34 (m, 4H, H7,11).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 171.17 (C4-arom.),




121.03 (C1-arom.), 105.37 (C2H-arom.), 65.72 (C8,10H2),



48.08 (C7,11H2).









3-([1,1′-biphenyl]-4-yl)-1H-pyrrolo[3,2-b]pyridine (Procedure 10)














VPC Number
LabBook Code
IC50 (eGFP) = 3.86


13 735
CA 4-55 Precipitate (yield = 79%)
IC50 (PSA) = 1.433









embedded image

  (White Solid)

tR (HPLC) = 3.55 min
MS (ESI−) m/z = 271.1169 [(M + H)+]












Mp = 254-259 ° C.



HRMS (ESI+): calculated for C19H15N2, m/z = 271.1230; found, 271.1225




1H NMR (400 MHz, DMSO-d6): δ (ppm) = 11.62 (s, 1H, H13), 8.48 (dd, J =




4.6, 1.5 Hz, 1H, H7), 8.43-8.39 (m, 2H, H3,5), 8.24 (s, 1H, H14), 7.85 (dd, J =



8.2, 1.5 Hz, 1H, H9), 7.72 (m, 4H, H1,6,17,21), 7.49 (m, 2H, H18,20), 7.39-7.35



(m, 1H, H19), 7.20 (dd, J = 8.2, 4.6 Hz, 1H, H8).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 144.02 (C11-arom.), 143.19 (C7H-




arom.), 140.64 (C16-arom.), 137.19 (C2-arom.), 134.48 (C4-arom.), 130.04 (C10-



arom.), 129.36 (C18,20H-arom.), 127.50 (C19H-arom.), 127.16 (C14H-arom.),



126.99 (C1,6H-arom.), 126.77 (C17,21H-arom.), 126.69 (C3,5H-arom.),



119.42 (C9H-arom.), 117.09 (C8H-arom.), 114.21 (C15-arom.).









3-(4-bromophenyl)-1H-pyrrolo[3,2-b]pyridine (Procedure 10)















LabBook Code



VPC Number
CA 4-64 Precipitate (yield = 25
IC50 (eGFP) = 0.08


13 737
%)
IC50 (PSA) = 0.037









embedded image

  (Pale Yellow Solid)

tR (HPLC) = 2.84 min
MS (ESI−) m/z = 273.0043, 275.0023 [(M + H)+]












Mp = 213-221° C.



HRMS (ESI+): calculated for C13H10BrN2, m/z = 273.0022, 275.0002;



found, 273.0015, 274.9995




1H NMR (400 mHz, DMSO-d6): δ (ppm) = 11.66 (s, 1H, H13), 8.46 (dd,




J = 4.6, 1.5 Hz, 1H, H7), 8.32-8.27 (m, 2H, H1,6), 8.24 (s, 1H, H14), 7.84



(dd, J = 8.2, 1.5 Hz, 1H, H9), 7.61-7.55 (m, 2H, H3,5), 7.19 (dd, J = 8.2,



4.6 Hz, 1H, H8).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 143.76 (C11-arom.), 143.27




(C7H-arom.), 134.53 (C4-arom.), 131.61 (C3,5H-arom.), 130.02 (C10-arom.),



128.10 (C1,6H-arom.), 127.44 (C14H-arom.), 119.53 (C9H-arom.), 118.24



(C2-arom.), 117.19 (C8H-arom.), 113.32 (C15-arom.).









3-(4-bromophenyl)-7-nitro-1H-indole (Procedure 10)














VPC Number
LabBook Code
IC50 (eGFP) = 0.083


13 738
CA 4-65 Precipitate (yield = 12%)
IC50 (PSA) = 0.062









embedded image

  (Orage Solid)

tR (HPLC) = 4.29 min
MS (ESI−) m/z = 314.9732, 316.9703 [(M + H)]












Mp = 192-196° C.



HRMS (ESI−): calculated for C14H8BrN2O2, m/z = 314.9775, 316.9755;



found, 314.9769, 316.9748




1H NMR (600 MHz, DMSO-d6): δ (ppm) = 12.21 (s, 1H, H13), 8.34 (dd, J =




7.9, 0.8 Hz, 1H, H12), 8.20 (dd, J = 8.0, 0.5 Hz, 1H, H8), 7.89 (s, 1H, H14),



7.71-7.63 (m, 4H, H1,3,5,6), 7.36 (t, J = 8.0 Hz, 1H, H7).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 133.24 (C4-arom.), 132.90 (C9-




arom.), 131.78 (C1,6H-arom.), 129.25 (C3,5H-arom.), 129.11 (C11-arom.),



128.95 (C10-arom.), 127.65 (C12H-arom.), 126.89 (C14H-arom.), 119.58 (C7H-



arom.), 119.26 (C2-arom.), 119.13 (C8H-arom.), 116.42 (C15-arom.).









methyl 3-(4-bromophenyl)-1H-indole-7-carboxylate (Procedure 10)















LabBook Code



VPC Number
CA 4-74 Precipitate (yield = 36
IC50 (eGFP) = 0.62


13 736
%)
IC50 (PSA) = 0.68









embedded image

  (Grey Solid)

tg (HPLC) = 4.37 min
MS (ESI−) m/z = 327.9978 [(M + H)]












Mp = 149-155° C.



HRMS (ESI−): calculated for C16H11BrNO2, m/z = 327.9979; found,



327.9978




1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.49 (s, 1H, H13), 8.16 (d,




J = 7.9 Hz, 1H, H12), 7.87 (d, J = 6.8 Hz, 1H, H8), 7.78 (d, J = 2.6 Hz,



1H, H14), 7.70-7.67 (m, 2H, H3,5), 7.65-7.61 (m, 2H, H1,6),



7.26 (t, J = 7.7 Hz, 1H, H7), 3.97 (s, 3H, H7).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 166.39 (C17O), 135.02




(C10-arom.), 134.18 (C4-arom.), 131.67 (C1,6H-arom.), 128.88



(C3,5H-arom.), 126.54 (C11-arom.), 125.42 (C14H-arom.),



124.83 (C12H-arom.),



124.30 (C8H-arom.), 119.49 (C7H-arom.), 118.57 (C2-arom.),



115.07 (C15-arom.), 113.07 (C9-arom.), 51.94 (C20H3).









3-phenyl-1H-pyrrolo[2,3-b]pyridine (Procedure 10)














VPC Number
LabBook Code
IC50 (eGFP) = 0.66


13 739
CA 4-75 Precipitate (yield = 54%)
IC50 (PSA) = 0.67









embedded image

  (Beige Solid)

tR (HPLC) = 3.40 min
MS (ESI+) m/z = 195.0920 [(M + H)+]












Mp = 92-94° C.



HRMS (ESI+): calculated for C13H11N2, m/z = 195.0917; found, 195.0919




1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.90 (s, 1H, H13), 8.30-8.26 (m,




2H, H8,12), 7.87 (d, J = 2.6 Hz, 1H, H14), 7.73 (dd, J = 8.2, 1.1 Hz, 2H, H3.5),



7.45 (dd, J = 8.0, 7.5 Hz, 2H, H1,6), 7.26 (tdd, J = 7.2, 6.0, 1.2 Hz, 1H, H2),



7.16 (dd, J = 7.9, 4.7 Hz, 1H, H7).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 149.06 (C10-arom.), 142.87 (C8H-




arom.), 135.05 (C4-arom.), 128.84 (C1,6H-arom.), 127.43 (C12H-arom.), 126.23



(C3,5H-arom.), 125.63 (C2H-arom.), 123.67 (C14H-arom.), 117.25 (C11-arom.),



116.00 (C7H-arom.), 114.25 (C15-arom.).









tert-butyl 3-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-indole-1-carboxylate















LabBook Code



Intermediate
CA 4-76 F2-6 (yield = 68%)




















embedded image

  (White Solid)

tR (HPLC) = 4.99 min
MS (ESI+) m/z = n.d.













1H NMR (400 MHz, DMSO-d6): δ (ppm) = 8.11-8.06 (m, 1H, H3), 7.88 (s,




1H, H8), 7.87-7.82 (m, 1H, H6), 7.37-7.32 (m, 1H, H2), 7.31-7.26 (m, 1H,



H1), 1.64 (s, 9H, H21,22,23), 1.33 (s, 12H, H15,16,17,18).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 149.11 (C24O), 135.87 (C4-




arom.), 135.33 (C8H-arom.), 133.22 (C5-arom.), 124.86 (C2H-arom.), 123.48



(C1H-arom.), 122.66 (C6H-arom.), 115.06 (C3H-arom.), 107.92 (C9-arom.),



84.79 (C20(CH3)3), 83.74 (C12,13(CH3)2), 28.07 (C21,22,23H3),



25.14 (C15,16,17,18H3).









3-(4-fluorophenyl)-1H-pyrrolo[2,3-b]pyridine (Procedure 10)














VPC Number
LabBook Code
IC50 (eGFP) = 0.12


13 740
CA 4-85 Precipitate (yield = 50%)
IC50 (PSA) = 0.12









embedded image

  (Beige Solid)

tR (HPLC) = 3.59 min
MS (ESI+) m/z = 213.0830 [(M + H)+]












Mp = 188-192° C.



HRMS (ESI+): calculated for C13H10FN2, m/z = 213.0823; found, 213.0823




1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.91 (s, 1H, H13), 8.28 (dd, J =




4.6, 1.3 Hz, 1H, H12), 8.26 (dd, J = 8.0, 1.1 Hz, 1H, H8), 7.86 (d, J = 2.6 Hz,



1H, H14), 7.77-7.73 (m, 2H, H3.5), 7.29-7.24 (m, 2H, H1,6), 7.16 (dd, J =



7.9, 4.6 Hz, 1H, H7).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 160.52 (d, J = 242.3 Hz, C2F-




arom.), 148.96 (C10-arom.), 142.92 (C8H-arom.), 131.49 (d, J = 3.0 Hz, C4-



arom.), 127.99 (d, J = 7.8 Hz, C3,5H-arom.), 127.27 (C12H-arom.), 123.66



(C14H-arom.), 117.15 (C11-arom.), 116.02 (C7H-arom.), 115.61 (d, J = 21.2 Hz,



C1,6H-arom.), 113.28 (C15-arom.).









3-(5-(trifluoromethyl)pyridin-2-yl)-1H-indole (Procedure 10)














VPC Number
LabBook Code
IC50 (eGFP) = 0.29


13 741
CA 4-88 Crystals (yield = 22%)
IC50 (PSA) = 0.29









embedded image

  (Colorless Solid)

tR (HPLC) = 4.03 min
MS (ESI+) m/z = 263.0793 [(M + H)+]












Mp = 154-157° C.



HRMS (ESI+) : calculated for C14H210F3N2, m/z = 263.0791; found,



263.0789




1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.77 (s, 1H, H13),




8.94-8.92 (m, 1H, H1), 8.50 (d, J = 7.7 Hz,



1H, H12), 8.32 (d, J = 2.9 Hz, 1H, H14), 8.02-8.04



(m, 2H, H5,6), 7.49 (d, J = 7.8 Hz, 1H, H9), 7.23-7.16 (m, 2H, H7,8).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 159.25 (d, J = 1.2 Hz,




C4-arom.), 145.86 (q, J = 4.2 Hz, C1H-arom.),



137.12 (C10-arom.), 133.25 (q, J = 3.1 Hz, C6H-arom.), 128.17



(C14H-arom.), 125.13 (C11-arom.), 124.31 (q, J = 271.5 Hz,



C16F3), 122.14 (C8H-arom.), 121.63 (C12H-arom.), 120.55 (C7H-arom.),



120.30 (q, J = 32.1 Hz, C2-arom.), 119.02 (C5-arom.),



114.24 (C15-arom.), 111.99 (C9H-arom.).









tert-butyl 7-methyl-3-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-indole-1-carboxylate















LabBook Code



Intermediate
CA 4-89 F10-24 (yield = 68%)









embedded image

  (White Solid)

tR (HPLC) = 5.20 min
MS (ESI+) m/z = n.d.













1H NMR (400 MHz, DMSO-d6): δ (ppm) = 7.85 (s, 1H, H8), 7.71 (d, J =




7.1 Hz, 1H, H6), 7.19 (t, J = 7.5 Hz, 1H, H1), 7.11 (d, J = 7.1 Hz, 1H,



H2), 2.53 (s, 3H, H19), 1.62 (s, 9H, H22,23,24), 1.33 (s, 12H, H15,16,17,18).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 148.60 (C25O), 137.15 (C8H-




arom.), 134.66 (C4-arom.), 133.93 (C5-arom.), 127.27 (C2H-arom.), 124.23



(C3-arom.), 123.28 (C1H-arom.), 119.88 (C6H-arom.), 107.29 (C9-arom.),



84.18 (C20(CH3)3), 83.18 (C12,13(CH3)2), 27.42 (C22,23,24H3), 24.67



(C15,16,17,18H3, 21.39 (C19H3).









3-(2-(trifluoromethyl)phenyl)-1H-indole (Procedure 10)














VPC Number
LabBook Code
IC50 (eGFP) = 1.01


13 745
CA 4-95 F4-8 (yield = 50%)
IC50 (PSA) = 0.95









embedded image

  (Beige Solid)

tR (HPLC) = 4.15 min
MS (ESI+) m/z = 260.0687 [(M + H)+]












Mp = 62-67° C.



HRMS (ESI−): calculated for C15H9F3N, m/z = 260.0693; found, 260.0687




1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.39 (s, 1H, H13), 7.85 (d, J = 7.9




Hz, 1H, H1), 7.72 (t, J = 7.4 Hz, 1H, H6), 7.59 (d, J = 7.5 Hz, 1H, H5), 7.55 (t,



J = 7.5 Hz, 1H, H2), 7.49 (d, J = 8.1 Hz, 1H, H9), 7.40 (s, 1H, H14), 7.36 (d,



J = 7.9 Hz, 1H, H12), 7.16 (t, J = 7.5 Hz, 1H, H8), 7.04 (t, J = 7.4 Hz, 1H, H7).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 135.73 (C10-arom.), 134.23 (d, J =




1.3 Hz, C4-arom.), 133.18 (C5H-arom.), 132.04 (C6H-arom.), 127.71 (q, J =



28.6 Hz, C3-arom.), 127.01 (C11-arom.), 126.89 (C2H-arom.), 126.26 (q, J = 5.4



Hz, C1H-arom.), 124.40 (d, J = 2.9 Hz, C14H-arom.), 124.39 (q, J = 273.6 Hz,



C16F3), 121.46 (C8H-arom.), 119.42 (C7H-arom.), 118.32 (C12H-arom.),



112.44 (C15-arom.), 111.70 (C9H-arom.).









2,3,4-trifluoro-6-iodoaniline















LabBook Code



Intermediate
CA 4-100 F6-11 (yield = 36%)









embedded image

  (Dark Solid)

tR (HPLC) = 3.78 min
MS (ESI+) m/z = 273.9338 [(M + H)+]













1H NMR( 600 MHz, CDCl3): δ (ppm) = 7.33 (ddd, J = 9.3, 7.6, 2.5 Hz, 1H,




H6), 4.07 (s, 2H, H7).




13C NMR (151 MHz, CDCl3): δ (ppm) = 143.20 (ddd, J = 244.0, 10.8, 2.8




Hz, C3-arom.), 139.98 (ddd, J = 250.5, 161.1, 13.7 Hz, C2-arom.), 138.48



(ddd, J = 247.1, 12.6, 3.3 Hz, C1-arom.), 133-43 (dd, J = 11.2 2.4 Hz,



C4-arom.), 119.96 (dd, J = 20.1, 3.9 Hz, C6H-arom.),



73.21 (ddd, J = 8.2, 4.5, 2.1 Hz, C5-arom.).









2-(5,6,7-trifluoro-1H-indol-3-yl)quinoline















LabBook Code




CA 4-101 F4-6 (yield = 13%)









embedded image

  (White Solid)

tR (HPLC) = 4.32 min
MS (ESI+) m/z = 299.0820 [(M + H)+]












HRMS (ESI+): calculated for C17H10F3N2, m/z = 299.0791; found, 299.0791




1H NMR (600 MHz, CDCl3): δ (ppm) = 9.99 (s, 1H, H15), 8.21 (d, J = 8.4 Hz,




1H, H10), 8.12 (d, J = 8.1 Hz, 1H, H3), 7.87 (d, J = 8.4 Hz, 1H, H9), 7.84 (d,



J = 8.4 Hz, 1H, H6), 7.77 (t, J = 7.5 Hz, 1H, H2), 7.57 (t, J = 7.3 Hz, 1H, H1),



7.23 (ddd, J = 9.7, 6.5, 1.6 Hz, 1H, H19), 7.12 (s, 1H, H14).




13C NMR (151 MHz, CDCl3): δ (ppm) = 148.30 (C8-arom.),




147.32 (C4-arom.), 146.70 (dd,



J = 240.3, 12.2 Hz, C16-arom.), 138.72 (C13-arom.), 137.53 (ddd, J = 249.3,



13.6, 4.5 Hz, C17-arom.), 136.93 (ddd, J = 244.8, 17.1, 11.3 Hz, C16-



arom.), 136.35 (C10-arom.), 129.70 (C2H-arom.), 128.58 (C3H-arom.), 127.22



(C6H-arom.), 127.06 (C5-arom.), 126.14 (C1H-arom.), 124.01 (dd, J = 6.9, 5.5



Hz, C12-arom.), 121.44 (dd, J = 7.7, 2.9 Hz, C11-arom.), 117.52 (C9H-arom.),



101.92 (m, C14,19H-arom.).









7-(7-methyl-1H-indol-3-yl)quinoline (Procedure 10)















LabBook Code



VPC Number
CA 4-102 Precipitate (yield = 32
IC50 (eGFP) = 0.76


13 744
%)
IC50 (PSA) = 0.75









embedded image

  (Green Solid)

tR (HPLC) = 2.94 min
MS (ESI+) m/z = 259.1272 [(M + H)+]












Mp = 199-201° C.



HRMS (ESI+): calculated for C18H15N2, m/z = 259.1230; found, 259.1228




1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.54 (s, 1H, H13), 8.89 (dd, J =




4.2, 1.7 Hz, 1H, H19), 8.34 (dd, J = 8.2, 0.9 Hz, 1H, H17), 8.30 (s, 1H, H3),



8.04-8.00 (m, 2H, H5,6), 7.98 (d, J = 2.4 Hz, 1H, H14), 7.87 (d, J = 8.0 Hz, 1H,



H12), 7.47 (dd, J = 8.2, 4.2 Hz, 1H, H18), 7.10 (t, J = 7.5 Hz, 1H, H8), 7.02 (d,



J = 7.0 Hz, 1H, H8), 2.54 (s, 3H, H16).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 150.65 (C19H-arom.), 148.56 (C1-




arom.), 137.35 (C4-arom.), 136.61 (C10-arom.), 135.55 (C17H-arom.), 128.24



(C6H-arom.), 126.41 (C5H-arom.), 125.92 (C2-arom.), 124.71 (C14H-arom.),



124.62 (C11-arom.), 124.05 (C3H-arom.), 122.23 (C8H-arom.), 121.36 (C9-



arom.), 120.40 (C7H-arom.), 120.28 (C18H-arom.), 116.64 (C12H-arom.),



115.27 (C15-arom.), 16.83 (C16H3).









tert-butyl 3-iodo-1H-pyrrolo[3,2-b]pyridine-1-carboxylate















LabBook Code



Intermediate
CA 4-104 F1-21 (yield = 83%)









embedded image

  (White Solid)

tR (HPLC) = 4.07 min
MS (ESI+) m/z = 345.0106 [(M + H)+]













1H NMR (400 MHz, DMSO-d6): δ (ppm) = 8.56 (dd, J = 4.7, 1.4 Hz,




1H, H1), 8.32 (dd, J = 8.3, 1.3 Hz, 1H, H3), 8.19 (s, 1H, H8), 7.43 (dd,



J = 8.3, 4.7 Hz, 1, H2), 1.64 (s, 9H, H13,14,15).




13C NMR = n.d.










3-(4-(trifluoromethyl)phenyl)-1H-indole (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.38


13 743
CA 4-105 F8-16 (yield = 51%)
IC50 (PSA) = 0.39













embedded image


tR (HPLC) = 4.34 min      MS (ESI+) m/z = 262.0850               [(M + H)+] Mp = 126-129° C. HRMS (ESI+): calculated for C15H11F3N, m/z = 262.0838; found, 262.0850 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.59 (s, 1H, H13), 7.94 (d, J = 8.2 Hz, 3H, H3,5,12), 7.90 (d, J = 2.6 Hz, 1H, H14), 7.76 (d, J = 8.2 Hz, 2H, H1,6), 7.50 (d, J = 8.0 Hz, 1H, H9), 7.22-7.18 (m, 1H, H8), 7.17-7.13 (m, 1H, H7).


(Pale Orange Solid)

13C NMR (151 MHz, DMSO-d6): δ (ppm) = 140.18 (d, J= 0.8 Hz, C4-arom.),




137.04 (C10-arom.), 126.48 (C3,5H-arom.), 125.58 (q, J= 3.7 Hz, C1,6H-arom.),



125.25 (d, J= 31.7 Hz, C2-arom.), 125.00 (C14H-arom.), 124.66 (C11H-arom.),



124.62 (q, J = 271.5 Hz, C16F3), 121.76 (C8H-arom.), 120.11 (C7H-arom.),



118.92 (C12H-arom.), 114.12 (C15-arom.), 112.19 (C9H-arom.).









1-methyl-5-(naphthalen-2-yl)-1H-indole (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 2.0


13 756
CA 4-108 Precipitate (yield = 45%)
IC50 (PSA) = 1.49













embedded image


tR (HPLC) = 4.56 min         MS (ESI+) m/z = 258.1260                  [(M + H)+] Mp = 200-204° C. HRMS (ESI+): calculated for C19H16N, m/z = 258.1277; found, 258.1276 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 8.21 (d, J = 0.7 Hz, 1H, H7), 8.00- 7.97 (m, 3H, H6,10,16), 7.93 (d, J = 8.0 Hz, 1H, H3), 7.91 (dd, J= 8.5, 1.7 Hz, 1H, H9), 7.64 (dd, J = 8.5, 1.6 Hz, 1H, H14), 7.57 (d, J = 8.5 Hz, 1H, H13), 7.54 (t, J = 7.3 Hz, 1H, H1), 7.49 (t, J = 7.3 Hz, 1H, H2), 7.39 (d, J = 3.0 Hz, 1H, H18), 6.53 (d, J = 3.0 Hz, 1H, H19), 3.85 (s, 3H, H20).


(Pale Yellow lid)

13C NMR (151 MHz, DMSO-d6): δ (ppm) = 139.02 (C8-arom.), 136.09 (C11-




arom.), 133.52 (C5-arom.), 131.70 (C4-arom.), 131.12 (C15-arom.), 130.43



(C18H-arom.), 128.68 (C12-arom.), 128.20 (C10H-arom.), 127.95 (C6H-arom.),



127.41 (C3H-arom.), 126.19 (C1H-arom.), 125.62 (C2H-arom.), 125.50 (C9H-



arom.), 124.60 (C7H-arom.), 120.61 (C14H-arom.), 118.75 (C16H-arom.),



110.20 (C13H-arom.), 100.86 (C19H-arom.), 32.58 (C20H3).









3-(4-(trifluoromethyl)phenyl)-1H-pyrrolo[3,2-b]pyridine (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) =


13
CA 4-109 Precipitate (yield = 69%)
IC50 (PSA) =













embedded image


tR (HPLC) = 2.89 min         MS (ESI+) m/z = 263.0792                  [(M + H)+] Mp = 223-226° C. HRMS (ESI+): calculated for C14H10F3N2, m/z = 263.0791; found, 263.0790 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.78 (s, 1H, H11), 8.55 (d, J = 8.2 Hz, 2H, H3,5), 8.49 (dd, J = 4.5, 1.3 Hz, 1H, H13), 8.36 (s, 1H, H7), 7.87 (dd, J = 8.2, 1.4 Hz, 1H, H15), 7.75 (d, J = 8.3 Hz, 2H, H2,6), 7.22 (dd, J = 8.2, 4.5


(Pale Yellow Solid)
Hz, 1H, H14).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 143.41 (C9-arom.), 143.07 (C13H-




arom.), 139.02 (d, J = 0.9 Hz, C4-arom.), 129.64 (C10-arom.), 128.07 (C7H-



arom.), 125.77 (C3,5H-arom.), 125.16 (q, J = 3.7 Hz, C2,6H-arom.), 125.14 (q,



J = 31.6 Hz, C1-arom.), 124.67 (q, J = 271.4 Hz, C16F3), 119.23 (C15H-arom.),



116.93 (C14H-arom.), 112.60 (C8-arom.).









3-(2-bromophenyl)-1H-pyrrolo[3,2-b]pyridine (Procedure 10)
















LabBook Code



CA 4-110 Precipitate2 (yield = 37%)







embedded image


tR (HPLC) = 2.61 min      MS (ESI+) m/z = 273.0018,                274.9998 [(M + H)+] HRMS (ESI+): calculated for C13H10BrN2, m/z = 2273.0022, 275.0002; found, 273.0018, 274.9998 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.61 (s, 1H, H11), 8.37 (d, J = 4.4 HZ, 1H, H13), 7.99 (s, 1H, H7), 7.90 (d, J = 7.7 Hz, 1H, H5), 7.85 (d, J = 8.1 Hz, 1H, H15), 7.74 (d, J = 7.9 Hz, 1H, H2), 7.45 (t, J = 7.5 Hz, 1H, H6), 7.24 (t, J =


(Beige Solid)
7.6 Hz, 1H, H1), 7.18 (dd, J = 8.1, 4.5 Hz, 1H, H14).




13C NMR (101 MHz, DMSO-d6): δ (ppm) = 143.75 (C9-arom.), 142.71 (C13H-




arom.), 134.57 (C4-arom.), 132.93 (C2H-arom.), 132.70 (C5H-arom.), 128.75



(C7H-arom.), 128.29 (C10-arom.), 127.86 (C1H-arom.), 127.21 (C6H-arom.),



122.57 (C3-arom.), 118.89 (C15H-arom.), 116.70 (C14H-arom.), 113.74 (C8-



arom.).









6-(7-methyl-1H-indol-3-yl)benzo[d]thiazole (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = Inactive


13 757
CA 4-114 F9-15 Precipitate (yield = 27%)
IC50 (PSA) = Inactive













embedded image


tR (HPLC) = 4.02 min            MS (ESI+) m/z = 265.0787                     [(M + H)+] Mp = 183-185° C. HRMS (ESI+): calculated for C16H13N2S, m/z = 265.0794; found, 265.0793 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.42 (s, 1H, H14), 9.32 (s, 1H, H8), 8.48 (d, J = 0.8 Hz, 1H, H6), 8.12 (d, J = 8.5 Hz, 1H, H3), 7.90 (dd, J = 8.5, 1.6 Hz, 1H, H4), 7.84-7.80 (m, 2H, H13,18), 7.05 (t, J = 7.5 Hz, 1H, H17), 6.99 (d,


(Beige Solid)
J = 7.0 Hz, 1H, H16), 2.52 (s, 3H, H19).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 154.81 (C8H-arom.), 150.95 (C1-




arom.), 136.43 (C10-arom.), 134.50 (C2-arom.), 133.67 (C5-arom.), 125.37



(C4H-arom.), 124.63 (C11-arom.), 123.87 (C13H-arom.), 123.01 (C3H-arom.),



122.07 (C16H-arom.), 121.15 (C15-arom.), 119.98 (C17H-arom.), 119.15 (C6H-



arom.), 116.70 (C18H-arom.), 115.44 (C12-arom.), 16.81 (C19H3).









2-(quinolin-5-yl)thiazole
















LabBook Code



CA 4-116 F14-17 (yield = 36%)







embedded image


tR (HPLC) = 2.95 min  MS (ESI+) m/z = 213.0468           [(M + H)+] 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 9.31 (d, J = 8.7 Hz, 1H, H6), 9.00 (dd, J = 4.0, 1.6 Hz, 1H, H4), 8.18 (d, J = 8.4 Hz, 1H, H10), 8.13 (d, J = 3.3 Hz, 1H, H12), 8.05 (d, J = 7.2 Hz, 1H, H8), 7.98 (d, J = 3.3 Hz, 1H, H11), 7.89 (dd, J = 8.3, 7.4 Hz, 1H, H9), 7.67 (dd, J = 8.7, 4.1 Hz, 1H, H5). 13C NMR (101 MHz, DMSO-d6): δ (ppm) = 165.68 (C14-arom.), 150.97 (C4H- arom.), 148.04 (C2-arom.), 143.95 (C12H-arom.), 134.04 (C6H-arom.), 131.25 (C10H-arom.), 130.17 (C7-arom.), 129.09 (C9H-arom.), 128.68 (C8H-arom.), 124.92 (C1-arom.), 122.51 (C5H-arom.), 121.55 (C11H-arom.).


(Pale Yellow



Solid)









5-(7-methyl-1H-indol-3-yl)benzo[d]thiazole (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = Inactive


13 758
CA 4-118 F18-25 (yield = 68%)
IC50 (PSA) = Inactive













embedded image


tR (HPLC) = 3.93 min           MS (ESI+) m/z = 265.0790                    [(M + H)+] Mp = 133-136° C. HRMS (ESI+): calculated for C16H13N2S, m/z = 265.0794; found, 265.0790 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.43 (s, 1H, H15), 9.41 (s, 1H, H8), 8.39 (d, J = 1.1 Hz, 1H, H6), 8.20 (d, J = 8.3 Hz, 1H, H3), 7.87 (dd, J = 8.4, 1.5 HZ, 1H, H4), 7.86 (d, J = 2.6 Hz, 1H, H13), 7.79 (d, J = 8.0 Hz, 1H, H18), 7.06


(Orange Solid)
(t, J = 7.5 Hz, 1H, H17), 6.99 (d, J = 7.0 Hz, 1H, H16), 2.54 (s, 3H, H19).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 156.22 (C8H-arom.), 153.99 (C2-




arom.), 136.44 (C10-arom.), 134.47 (C5-arom.), 130.24 (C1-arom.), 124.84



(C4H-arom.), 124.70 (C11-arom.), 123.76 (C13H-arom.), 122.52 (C3H-arom.),



122.05 (C16H-arom.), 121.21 (C15-arom.), 120.04 (C6H-arom.), 120.01 (C17H-



arom.), 116.45 (C18H-arom.), 115.56 (C12-arom.), 16.83 (C19H3).









5-(7-methyl-1H-indol-3-yl)benzo[d]oxazole (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.3


13 759
CA 4-119 Precipitate (yield = 26%)
IC50 (PSA) = 0.27













embedded image


tR (HPLC) = 3.87 min           MS (ESI+) m/z = 249.1041                    [(M + H)+] Mp = 171-172° C. HRMS (ESI+): calculated for C16H13N2O, m/z = 249.1022; found, 249.1016 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.35 (s, 1H, H14), 8.75 (s, 1H, H8), 8.03 (d, J = 1.3 Hz, 1H, H6), 7.82 (d, J = 8.4 Hz, 1H, H3), 7.77 (dd, J = 8.4, 1.6 Hz, 1H, H4), 7.75 (d, J = 2.6 Hz, 1H, H13), 7.72 (d, J = 8.0 Hz, 1H, H18), 7.03


(Mauve Solid)
(t, J = 7.5 Hz, 1H, H17), 6.98 (d, J = 7.0 Hz, 1H, H16), 2.52 (s, 3H, H19).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 154.42 (C8H-arom.), 147.60 (C1-




arom.), 140.40 (C2-arom.), 136.31 (C10-arom.), 132.98 (C5-arom.), 124.75



(C4H-arom.), 124.70 (C11-arom.), 123.40 (C13H-arom.), 121.95 (C16H-arom.),



121.11 (C15-arom.), 119.88 (C17H-arom.), 117.38 (C6H-arom.), 116.32 (C18H-



arom.), 115.79 (C12-arom.), 111.18 (C3H-arom.), 16.81 (C19H3).









2-(7-methyl-1H-indol-3-yl)benzo[d]thiazole (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.1


13 760
CA 4-120 F12-18 Precipitate (yield = 30%)
IC50 (PSA) = 0.52













embedded image


tR (HPLC) = 4.02 min             MS (ESI+) m/z = 265.0788                      [(M + H)+] Mp = 179-182° C. HRMS (ESI+): calculated for C16H13N2S, m/z = 265.0794; found, 265.0790 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.95 (s, 1H, H5), 8.25 (d, J = 2.9 Hz, 1H, H4), 8.22 (d, J = 7.9 Hz, 1H, H9), 8.06 (d, J = 7.9 Hz, 1H, H13), 7.97 (d, J = 8.1 Hz, 1H, H16), 7.49 (t, J = 7.6 Hz, 1H, H15), 7.37 (t, J = 7.6 Hz, 1H,


(Grey Solid)
H14), 7.17 (t, J = 7.5 Hz, 1H, H8), 7.07 (d, J = 7.1 Hz, 1H, H7), 2.54 (s, 3H, H10).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 162.90 (C18-arom.), 153.68 (C12-




arom.), 136.26 (C1-arom.), 133.03 (C11-arom.), 128.52 (C4H-arom.), 126.09



(C15H-arom.), 124.32 (C2-arom.), 124.17 (C14H-arom.), 123.25 (C7H-arom.),



121.71 (C13H-arom.), 121.63 (C6-arom.), 121.53 (C16H-arom.), 121.30 (C8H-



arom.), 118.22 (C9H-arom.), 110.81 (C3-arom.), 16.74 (C10H3).









3-(3-bromophenyl)-1H-pyrrolo[3,2-b]pyridine (Procedure 10)















VPC Number
LabBook Code


13 760
CA 4-124 Precipitate (yield = 30%)







embedded image


tR (HPLC) = 2.71 min      MS (ESI+) m/z = 273.0006,               274.9986 [(M + H)+] HRMS (ESI+): calculated for C13H10BrN2, m/z = 273.0022, 275.0002; found, 273.0023, 275.0003 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.69 (s, 1H), 8.65 (s, 1H), 8.49 (d, J = 3.5 Hz, 1H), 8.29 (d, J = 2.8 Hz, 1H), 8.28-8.25 (m, 1H), 7.85 (dd, J = 8.2, 1.0 Hz, 1H), 7.38-7.34 (m, 2H), 7.20 (dd, J = 8.1, 4.6 Hz, 1H).


(White Solid)

13C NMR = n.d.










4-bromo-2-(7-methyl-1H-indol-3-yl)thiazole (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = 0.045


13766
CA 4-125 F7-11 (yield = 43%)
IC50 (PSA) = 0.02













embedded image


tR (HPLC) = 4.00 min           MS (ESI+) m/z = 292.9743,                    294.9724 [(M + H)+] Mp = 127-130° C. HRMS (ESI+): calculated for C12H10BrN2S, m/z = 292.9743, 294.9722; found, 292.9743, 294.9723 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.86 (s, 1H, H5), 8.16 (s, 1H, H4), 7.93 (d, J = 7.7 Hz, 1H, H9), 7.62 (s, 1H, H14), 7.13 (t, J = 7.3 Hz, 1H, H8), 7.04 (d, J = 6.6 Hz, 1H, H7), 2.52 (s, 3H, H10). 13C NMR (151 MHz, DMSO-d6): δ (ppm) = 164.43 (C11-arom.), 136.06 (C1-


(Green Solid)
arom.), 126.82 (C4H-arom.), 123.71 (C13-arom.), 123.69 (C2-arom.), 123.09



(C7H-arom.), 121.67 (C6H-arom.), 121.19 (C8H-arom.), 117.45 (C9H-arom.),



113.69 (C14H-arom.), 110.13 (C3-arom.), 16.71 (C10H3).









tert-butyl 6-fluoro-3-iodo-1H-indole-1-carboxylate















Intermediate
LabBook Code



CA 4-126 F1-6 (yield = 95%)







embedded image


tR (HPLC) = 4.80 min      MS (ESI+) m/z = n.d. 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 7.90 (s, 1H, H8), 7.82 (dd, J = 10.2, 2.0 Hz, 1H, H3), 7.40 (dd, J = 8.7, 5.3 Hz, 1H, H6), 7.24 (td, J = 9.1, 2.4 Hz, 1H, H1), 1.64 (s, 9H, H14,15,16). 13C NMR (151 MHz, DMSO-d6): δ (ppm) = 160.69 (d, J = 239.6 Hz, C2- arom.), 147.88 (C17O), 134.17 (d, J = 13.2 Hz, C4-arom.), 130.75 (d, J = 3.8 Hz, C8H-arom.), 128.47 (C5-arom.), 122.61 (d, J = 10.3 Hz, C6H-arom.), 111.66 (d, J = 24.4 Hz, C1H-arom.), 101.61 (d, J, = 28.9 Hz, C3H-arom.),


(Pale Brown Solid)
84.90 (C13), 66.05 (C9-arom.), 27.55 (s C14,15,16H3).









3-(4-methoxyphenyl)-1H-pyrrolo[3,2-b]pyridine (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) =


13
CA 4-127 Precipitate (yield = 89%)
IC50 (PSA) =













embedded image


tR (HPLC) = 2.54 min        MS (ESI+) m/z = 225.1037                  [(M + H)+] Mp = 202-206° C. HRMS (ESI+): calculated for C14H13N2O, m/z = 225.1022; found, 2251027 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.42 (s, 1H, H11), 8.43 (dd, J = 4.5, 1.5 Hz, 1H, H13), 8.22-8.18 (m, 2H, H2,6), 8.04 (d, J = 2.8 Hz, 1H, H7), 7.80 (dd, J = 8.2, 1.5 Hz, 1H, H15), 7.16 (dd, J = 8.1, 4.5 Hz, 1H, H14), 7.01-


(Pale Brown Solid)
6.96 (m, 2H, H3,5), 3.79 (s, 3H, H17).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 157.12 (C1-arom.), 143.36 (C9-




arom.), 142.39 (C13H-arom.), 129.37 (C10-arom.), 127.28 (C4-arom.), 127.01



(C2,6H-arom.), 125.43 (C7H-arom.), 118.69 (C15H-arom.), 116.38 (C14H-



arom.), 114.10 (C8-arom.), 113.76 (C3,5H-arom.), 55.01 (C17H3).









6-(7-methyl-1H-indol-3-yl)isoquinoline (Procedure 10)
















VPC Number
LabBook Code
IC50 (eGFP) = inactive


13765
CA 4-128 Precipitate (yield = 34%)
IC50 (PSA) = inactive













embedded image


tR (HPLC) = 3.01 min           MS (ESI+) m/z = 259.1230                    [(M + H)+] Mp = 222-225° C. HRMS (ESI+): calculated for C18H15N2, m/z = 259.1230; found, 259.1231 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.59 (s, 1H, H5), 9.25 (s, 1H, H16), 8.47 (d, J= 5.7 Hz, 1H, H12), 8.27 (s, 1H, H17), 8.15-8.09 (m, 2H, H19,20), 8.01 (d, J = 2.7 Hz, 1H, H4), 7.95 (d, J = 8.0 Hz, 1H, H9), 7.88 (d, J =


(Yellowish Solid)
5.8 Hz, 1H, H13), 7.11 (t, J = 7.5 Hz, 1H, H9), 7.03 (d, J = 7.0 Hz, 1H, H7),



2.54 (s, 3H, H10).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 151.69 (C16H-arom.), 143.10




(C12H-arom.), 138.20 (C18-arom.), 136.65 (C1-arom.), 136.13 (C14-arom.),



127.81 (C20H-arom.), 127.20 (C19H-arom.), 126.42 (C15-arom.), 125.23



(C4H-arom.), 124.55 (C2-arom.), 122.35 (C7H-arom.), 121.35 (C6-arom.),



121.17 (C17H-arom.), 120.35 (C8H-arom.), 120.20 (C13H-arom.), 116.98



(C9H-arom.), 115.17 (C3-arom.), 16.81 (C10H3).









2-(6-fluoro-1H-indol-3-yl)quinoline
















VPC Number
LabBook Code
IC50 (eGFP) = 0.1


13764
CA 4-131 F25-28 Precipitate (yield = 5%)
IC50 (PSA) = 0.082













embedded image


tR (HPLC) = 3.07 min          MS (ESI+) m/z = 263.0968                   [(M + H)+] Mp = 195-198° C. HRMS (ESI+): calculated for C17H12FN2, m/z = 263.0979; found, 263.0981 1H NMR (600 MHz, DMSO-d6): δ (ppm) = 11.71 (s, 1H, H17), 8.90 (dd, J = 8.7, 5.9 Hz, 1H, H16), 8.36 (d, J = 2.6 Hz, 1H, H18), 8.27 (d, J = 8.7 Hz, 1H, H10), 8.06-8.02 (m, 2H, H3,9), 7.90 (d, J = 7.7 Hz, 1H, H6), 7.72 (ddd, J =


(Pale Yellow Solid)
8.3, 7.2, 1.3 Hz, 1H, H6), 7.49 (ddd, J = 7.8, 6.6, 0.6 Hz, 1H, H1), 7.26 (dd, J =



9.8, 2.4 Hz, 1H, H13), 7.07 (td, J = 9.6, 2.4 Hz, 1H, H11).




13C NMR (151 MHz, DMSO-d6): δ (ppm) = 159.13 (d, J = 235.8 Hz, C12-




arom.), 155.18 (C8-arom.), 147.68 (C4-arom.), 137.16 (d, J = 12.5 Hz, C14-



arom.), 135.69 (C10H-arom.), 129.38 (C2H-arom.), 128.39 (C3H-arom.),



128.32 (d, J = 2.8 Hz, C18H-arom.), 127.63 (C6H-arom.), 125.87 (C5-arom.),



125.02 (C1H-arom.), 123.78 (d, J = 9.8 Hz, C16H-arom.), 122.40 (C15-arom.),



119.08 (C9H-arom.), 115.58 (C19-arom.), 108.64 (d, J = 23.6 Hz, C11H-



arom.), 97.73 (d, J = 25.4 Hz, C13H-arom.).










A person of skill in the art based on the general knowledge in the art and the information provided herein would be able to synthesize the compounds described herein or modify the compounds described herein.


eGFP Cellular Transcription Assay


AR transcriptional activity was assayed as previously described (Tavassoli, P. et al. Rapid, non-destructive, cell-based screening assays for agents that modulate growth, death, and androgen receptor activation in prostate cancer cells. Prostate 2007, 67, 416-426). Briefly, stably transfected eGFP-expressing LNCaP human prostate cancer cells (LN-ARR2PB-eGFP) containing an androgen responsive probasin-derived promoter (ARR2PB) were grown in phenol red free RPMI 1640 supplemented with 5% CSS. After 5 days, the cells were plated into a 96-well plate (35,000 cells/well) with 0.1 nM of the synthetic androgen R1881 and increasing concentrations (0-100 μM) of compound. The cells were incubated for three days and the fluorescence was then measured (excitation 485 nm, emission 535 nm). The viability of these cells was assayed by MTS cell proliferation assay (CellTiter 961™ Aqueous One Solution Reagent, Promega™)


Structure Solution and Refinement

The ternary complex structure was solved by molecular replacement using the Phaser program (McCoy, A. J. et al. Phaser crystallographic software. J Appl Crystallogr 2007, 40, 658-674) and the coordinate of an apo-protein structure of AR-testosterone complex (Protein Data Bank entry 2AM9) as the search model. The structures were refined with iterative cycles of manual density fitting with COOT and refinement with Refmac (Murshudov, G. N. et al. Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr D Biol Crystallogr. 1997, 53, 240-255). The extra density of testosterone was clearly observed at the initial refinement step. A characteristic electron density of the compound was observed at the BF3 binding site.


Heterologous Expression of Androgen Receptor

The AR ligand binding domain was expressed and purified as previously described (Estebanez-Perpina, E. et al. Proc. Nat. Acad. Sci. USA (2007) 104:16074-16079).


eGFP Cellular AR Transcription Assay:


AR transcriptional activity was assayed as previously described.21 Briefly, stably transfected eGFP-expressing LNCaP human prostate cancer cells (LN-ARR2PBeGFP) containing an androgen-responsive probasin-derived promoter (ARR2PB) were grown in phenol-red-free RPMI 1640 supplemented with 5% CSS. After 5 days, the cells were plated into a 96-well plate (35,000 cells/well) with 0.1 nM R1881 and increasing concentrations (0-100 M) of compound. The cells were incubated for 3 days, and the fluorescence was then measured (excitation, 485 nm; emission, 535 nm). The viability of these cells has been assayed by the MTS cell proliferation assay (CellTiter 961 Aqueous One Solution Reagent, Promega) according to the instructions of the manufacturer.


Prostate Surface Antigen Assay:

The evaluation of PSA excreted into the media was performed in parallel to the eGFP assay using the same plates (see above description). After the cells were incubated for 3 days 150 μl of the media was taken from each well, and added to 150p of PBS. PSA levels were then evaluated using Cobas e 411 analyzer instrument (Roche Diagnostics) according to the manufacturer's instructions.


EXAMPLES
Example 1—Virtual Screen for Potential BF3 Binders

Using a previously described (Axerio-Cilies, P. et al. Inhibitors of Androgen Receptor Activation Function-2 (AF2) Site Indentified Through Virtual Screening. J Med Chem 2011 54(18):6197-205), consensus-based in silico methodology we conducted a virtual screen of ˜10 million purchasable chemical substances from the ZINC database to identify BF3-specific binders (also one NCI compound). The screening method used a combination of large-scale docking, ligand-based QSAR modeling, pharmacophore search, molecular field analysis, molecular-mechanic and molecular dynamic simulations (Cherkasov, A. et al. Progressive docking: a hybrid QSAR/docking approach for accelerating in silico high throughput screening. J Med Chem. 2006, 49, 7466-7478; Cherkasov, A. et al. ‘Inductive’ charges on atoms in proteins: comparative docking with the extended steroid benchmark set and discovery of a novel SHBG ligand. J Chem Inf Model 2005, 45, 1842-1853; and Santos-Filho, O. A. and Cherkasov, A. Using molecular docking, 3D-QSAR, and cluster analysis for screening structurally diverse data sets of pharmacological interest. J Chem Inf Model 2008, 48, 2054-2065). The results from each stage of this multi-parametric approach were compiled and the compounds were ranked using a consensus scoring procedure. The highest ranked compounds were visualized and initial candidates, predicted to have a high potential for binding to the BF3 pocket, were selected for empirical testing.


Example 2—Cell-Based Testing

All compounds were screened for their ability to inhibit AR transcriptional activity using a non-destructive, cell-based eGFP screening assay (Tavassoli, P. et al. Rapid, non-destructive, cell-based screening assays for agents that modulate growth, death, and androgen receptor activation in prostate cancer cells. Prostate 2007, 67, 416-426). In this assay, the expression of eGFP is under the control of an androgen responsive probasin-derived promoter and can quantify AR transcriptional activity. From the compounds tested, 7 showed sub-μM IC50 values in the eGFP assay. Compounds that exhibited non-specific cellular toxicity were removed from further analysis. The most potent molecules had IC50's ranging in from 0.11 to 50 μM range (TABLE 3). Some compounds were also tested in the PSA assay (TABLE 3).









TABLE 3







Structural and experimental data for the AR BF3 interactors.














eGFP



Internal
ZINC

IC50
PSA IC50


Number
Number
STRUCTURE
(μM)
(μM)





13555
Synthetic derivative


embedded image


Inactive
Not tested





13557
Synthetic derivative


embedded image


Inactive
Not tested





 9039
Synthetic derivative


embedded image


>200  
Not tested





13312
ZINC00298052


embedded image


200.0 
Not tested





 9040
Synthetic derivative


embedded image


39.13
Not tested





13309
ZINC01234071


embedded image


27.2 
Not tested





 9034
Synthetic derivative


embedded image


20 
Not tested





13551
Synthetic derivative


embedded image


15.5 
Not tested





13550
Synthetic derivative


embedded image


11.75
Not tested





 9026
Synthetic derivative


embedded image


11.67
Not tested





13544
Synthetic derivative


embedded image


11.4 






13561
Synthetic derivative


embedded image


10.7 
Not tested





13310
ZINC00297221


embedded image


10.3 
Not tested





13232
ZINC02992016


embedded image


10 
Not tested





 9028
Synthetic derivative


embedded image


10 
Not tested





13050
ZINC03365783


embedded image


 9.725
Not Determined





13300
ZINC00270867


embedded image


9.3
 6.76





13299
ZINC00499454


embedded image


8.2
Not tested





 9027
Synthetic derivative


embedded image


 7.721
Not tested





13538
Synthetic derivative


embedded image


7.7






13304
ZINC00270887


embedded image


7.3
 4.54





13258
ZINC18191564


embedded image


6.8
Not tested





13559
Synthetic derivative


embedded image


6.6
Not tested





13512
Synthetic derivative


embedded image


6.0






13542
Synthetic derivative


embedded image


5.7






 9125
ZINC30469682


embedded image


5.2
2.4





13186
ZINC00513042


embedded image


5 
Not determined





13224
ZINC04106386


embedded image


5 
Not determined





13524
Synthetic derivative


embedded image


4.9
 6.65





13508
Synthetic derivative


embedded image


4.8
2.7





13250
ZINC03149578


embedded image


4.7
Not tested





13530
Synthetic derivative


embedded image


4.7
 1.60





13303
ZINC00270884


embedded image


4.5
Not tested





13503
Synthetic derivative


embedded image


4.5
Not tested





13257
ZINC12345945


embedded image


4.2
Not tested





13502
Synthetic derivative


embedded image


4.1
Not tested





 9037
Synthetic derivative


embedded image


 4.093
Not tested





13243
ZINC00253227


embedded image


3.9
Not tested





13543
Synthetic derivative


embedded image


3.7
 3.19





13424
ZINC12346351


embedded image


3.7
 3.58





13516
Synthetic derivative


embedded image


3.6
Not tested





 6054
ZINC08718421


embedded image


3.4
Not Determined





13505
Synthetic derivative


embedded image


3.4
Not tested





13522
Synthetic derivative


embedded image


3.4
 2.19





13029
ZINC00210926


embedded image


 3.221
Not Determined





13548
Synthetic derivative


embedded image


 3.21
 4.24





 9128
ZINC47424036


embedded image


3.2
3.5





13525
Synthetic derivative


embedded image


3.1
 7.09





13511
Synthetic derivative


embedded image


3.0
1.9





13216
ZINC06025409


embedded image


2.8
Not Determined





13532
Synthetic derivative


embedded image


2.8
 3.10





13260
ZINC4941101


embedded image


2.7
Not tested





13416
ZINC01869964


embedded image


2.7
 2.32





13509
Synthetic derivative


embedded image


2.6
3.1





 9043
Synthetic derivative


embedded image


 2.503
Not tested





13202
ZINC01768344


embedded image


2.5
Not Determined





13510
Synthetic derivative


embedded image


2.5
 1.54





13540
Synthetic derivative


embedded image


2.5
Not tested





13411
ZINC04106386


embedded image


2.4
2.4





13560
Synthetic derivative


embedded image


2.3
7.5





13214
ZINC26472877


embedded image


2.2
Not Determined





13235
ZINC01037115


embedded image


2.2
 1.01





13536
Synthetic derivative


embedded image


2.2
 2.521





13556
Synthetic derivative


embedded image


 2.112
 2.18





13127
ZINC00392643


embedded image


2.1
 0.11





13261
ZINC48546225


embedded image


2.1
Not tested





13215
ZINC05504717


embedded image


2 
Not Determined





13504
Synthetic derivative


embedded image


2.0
 1.69





13167
NSC105329


embedded image


1.9
 1.25





13206
ZINC04962047


embedded image


1.8
Not Determined





13145
ZINC34603778


embedded image


1.7
 2.46





13549
Synthetic derivative


embedded image


1.7
 2.57





13245
ZINC00555700


embedded image


1.7
 1.69





13036
ZINC14961821


embedded image


 1.602
Not Determined





13166
ZINC01723993


embedded image


1.6
 2.12





13558
Synthetic derivative


embedded image


1.6
2.1





13535
Synthetic derivative


embedded image


1.5
 1.873





13164-B
ZINC02046058


embedded image


1.3
 1.59





13500
Synthetic derivative


embedded image


 1.23
 0.41





13254
ZINC18191551


embedded image


1.2
Not tested





13410
ZINC04106383


embedded image


1.2
 2.03





13552
Synthetic derivative


embedded image


 1.125
 1.14





13423
ZINC18191568


embedded image


1.1
1.2





13222
ZINC02718340


embedded image


 0.95
 0.74





13247
ZINC48090221


embedded image


0.9
 0.43





13412
ZINC02718340


embedded image


0.9
 1.23





13534
Synthetic derivative


embedded image


0.8
 1.251





13434
ZINC00069102


embedded image


0.8
 0.73





13164-A
ZINC02046058


embedded image


 0.77
 0.67





13220
ZINC48544111


embedded image


0.7
Not Determined





13225
ZINC18191568


embedded image


0.7
0.9





13537
Synthetic derivative


embedded image


0.7
  0.8057





13436
ZINC00068959


embedded image


0.6
0.4





13554
Synthetic derivative


embedded image


 0.59
 0.67





13541
Synthetic derivative


embedded image


0.5
 0.94





13255
ZINC18191553


embedded image


0.5
 0.46





13163-A
ZINC02043019


embedded image


 0.48
 0.16





13163-B
ZINC02043019


embedded image


 0.48
 0.24





13256
ZINC05848672


embedded image


0.4
 0.13





13521
Synthetic derivative


embedded image


0.4
 0.26





13427
ZINC00588219


embedded image


0.4
 0.31





13259
ZINC18191559


embedded image


0.3
 0.25





13506
Synthetic derivative


embedded image


 0.18
0.6





13226
ZINC18191571


embedded image

23

 0.11
 0.076





13562
Known see U.S. Pat. No. 6,207,679


embedded image


 0.06
 0.14





13566
Known see U.S. Pat. No. 6,207,679


embedded image


 0.004
 0.011





13567
Synthetic derivative


embedded image


 0.200
 0.230





13568
Synthetic derivative


embedded image


 1.300
 1.560





13569
Synthetic derivative


embedded image


 1.600
Not tested





13570
Synthetic derivative


embedded image


 20.000
Not tested





13571
Synthetic derivative


embedded image


 1.100
Not tested





13573
Synthetic derivative


embedded image


 0.560
Not tested





13574
Synthetic derivative


embedded image


 2.570
Not tested





13576
Synthetic derivative


embedded image


 0.144
 0.048





13577
Synthetic derivative


embedded image


 3.200
 1.730





13579
Synthetic derivative


embedded image


 0.101
 0.043





13580
Synthetic derivative


embedded image


 2.900
Not tested





13582
Synthetic derivative


embedded image


 0.052
 0.041





13585
Synthetic derivative


embedded image


 0.110
 0.039





13587
Synthetic derivative


embedded image


 0.760
 0.530





13589
Synthetic derivative


embedded image


 5.300
Not tested





13591
Synthetic derivative


embedded image


 0.042
 0.085





13592
Synthetic derivative


embedded image


 1.590
 1.220





13593
Synthetic derivative


embedded image


 0.198
 0.130





13594
Synthetic derivative


embedded image


 0.166
 0.099





13595
Synthetic derivative


embedded image


 0.177
Not tested





13596
Synthetic derivative


embedded image


Inactive
Inactive





13597
Synthetic derivative


embedded image


 0.236
 0.132





13598
Synthetic derivative


embedded image


Inactive
Inactive





13599
Synthetic derivative


embedded image


Inactive
Inactive





13600
Synthetic derivative


embedded image


 1.249
 0.929





13601
Synthetic derivative


embedded image


 0.233
 0.165





13602
Synthetic derivative


embedded image


 0.240
 0.182





13603
Synthetic derivative


embedded image


 0.633
 0.339





13604
Synthetic derivative


embedded image


Inactive
Inactive





13605
Synthetic derivative


embedded image


Inactive
Inactive





13606
Synthetic derivative


embedded image


 1.649
 1.427





13607
Synthetic derivative


embedded image


 0.168
 0.087





13608
Synthetic derivative


embedded image


Inactive
Inactive





13609
Synthetic derivative


embedded image


Inactive
Inactive





13610
Synthetic derivative


embedded image


 0.032
 0.013





13611
Synthetic derivative


embedded image


 0.297
 0.121





13612
Synthetic derivative


embedded image


 1.44
 0.813





13613
Synthetic derivative


embedded image


 11.540
 1.738





13614
Synthetic derivative


embedded image


 1.117
 0.597





13615
Synthetic derivative


embedded image


Inactive
Inactive





13616
Synthetic derivative


embedded image


Inactive
Inactive





13617
Synthetic derivative


embedded image


Inactive
Inactive





13618
Synthetic derivative


embedded image


 0.194
 0.13





13619
Synthetic derivative


embedded image


 2.170
Not tested





13620
Synthetic derivative


embedded image


Inactive
Inactive





13621
Synthetic derivative


embedded image


 0.02
 0.008





13622
Synthetic derivative


embedded image


0.1
 0.075





13623
Synthetic derivative


embedded image


Inactive
Inactive





13624
Synthetic derivative


embedded image


 0.100
 0.042





13625
Synthetic derivative


embedded image


 1.900
 1.230





13626
Synthetic derivative


embedded image


 2.700
 1.650





13627
Synthetic derivative


embedded image


 1.500
 1.160





13628
Synthetic derivative


embedded image


 0.800
 0.610





13629
Synthetic derivative


embedded image


 4.900
 1.780





13630
Synthetic derivative


embedded image


 0.600
 0.430





13631
Synthetic derivative


embedded image


Inactive
Inactive





13632
Synthetic derivative


embedded image


Inactive
Inactive





13633
Synthetic derivative


embedded image


 6.000
Not tested





13634
Synthetic derivative


embedded image


 5.000
Not tested





13635
Synthetic derivative


embedded image


Inactive
Inactive





13636
Synthetic derivative


embedded image


Inactive
Inactive





13637
Synthetic derivative


embedded image


Inactive
Inactive





13638
Synthetic derivative


embedded image


Inactive
Inactive





13639
Synthetic derivative


embedded image


 0.549
 0.544





13640
Synthetic derivative


embedded image


 12.670
Not tested





13641
Synthetic derivative


embedded image


 0.132
 0.403





13642
Synthetic derivative


embedded image


 0.033
 0.025





13643
Synthetic derivative


embedded image


  0.1638
 0.156





13644
Synthetic derivative


embedded image


 3.000
Not tested





13645
Synthetic derivative


embedded image


 0.261
 0.247





13646
Synthetic derivative


embedded image


 0.179
 0.224





13647
Synthetic derivative


embedded image


Inactive
Inactive





13648
Synthetic derivative


embedded image


Inactive
Inactive





13649
Synthetic derivative


embedded image


Inactive
Inactive





13650
Synthetic derivative


embedded image


 1.631
Not tested





13651
Synthetic derivative


embedded image


 0.404
Not tested





13652
Synthetic derivative


embedded image


 3.54
 1.76





13653
Synthetic derivative


embedded image


 1.13
 0.29





13654
Synthetic derivative


embedded image


 0.92
 0.16





13655
Synthetic derivative


embedded image


 1.66
 0.61





13656
Synthetic derivative


embedded image


 0.99
 0.46





13657
Synthetic derivative


embedded image


Inactive
Inactive





13658
Synthetic derivative


embedded image


 2.85
 2.21





13659
Synthetic derivative


embedded image


Inactive
Inactive





13660
Synthetic derivative


embedded image


2.5
 1.89





13661
Synthetic derivative


embedded image


Inactive
Inactive





13662
Synthetic derivative


embedded image


Inactive
Inactive





13663
Synthetic derivative


embedded image


Inactive
Inactive





13664
Synthetic derivative


embedded image


Inactive
Inactive





13665
Synthetic derivative


embedded image


 0.27
 0.21





13666
Synthetic derivative


embedded image


Inactive
Inactive





13667
Synthetic derivative


embedded image


Inactive
Inactive





13668
Synthetic derivative


embedded image


Inactive
Inactive





13669
Synthetic derivative


embedded image


Inactive
Inactive





13670
Synthetic derivative


embedded image


Inactive
Inactive





13671
Synthetic derivative


embedded image


Inactive
Inactive





13672
Synthetic derivative


embedded image


Inactive
Inactive





13673
Synthetic derivative


embedded image


Inactive
Inactive





13674
Synthetic derivative


embedded image


 0.075
 0.051





13677
Synthetic derivative


embedded image


 0.156
 0.11





13678
Synthetic derivative


embedded image


Inactive
Inactive





13679
Synthetic derivative


embedded image


Inactive
Inactive





13680
Synthetic derivative


embedded image


0.8
Not tested





13681
Synthetic derivative


embedded image


2.5
1.7





13682
Synthetic derivative


embedded image


 0.89
 0.99





13683
Synthetic derivative


embedded image


2.6
 1.906





13684
Synthetic derivative


embedded image


1.4
 6.609





13685
Synthetic derivative


embedded image


Inactive
Inactive





13686
Synthetic derivative


embedded image


Inactive
Inactive





13687
Synthetic derivative


embedded image


Inactive
Inactive





13688
Synthetic derivative


embedded image


 0.069
 0.068





13689
Synthetic derivative


embedded image


Inactive
Inactive





13690
Synthetic derivative


embedded image


Inactive
Inactive





13691
Synthetic derivative


embedded image


0.4
 0.48





13692
Synthetic derivative


embedded image


0.1
 0.082





13693
Synthetic derivative


embedded image


 0.11
 0.12





13694
Synthetic derivative


embedded image


 0.07
 0.067





13695
Synthetic derivative


embedded image


 0.069
 0.087





13696
Synthetic derivative


embedded image


 0.042
 0.042





13697
Synthetic derivative


embedded image


 0.029
 0.029





13698
Synthetic derivative


embedded image


 0.041
 0.041





13699
Synthetic derivative


embedded image


 0.073
 0.073





13700
Synthetic derivative


embedded image


Inactive
Inactive





13701
Synthetic derivative


embedded image


Inactive
Inactive





13702
Synthetic derivative


embedded image


 0.21
 0.14





13704
Synthetic derivative


embedded image


 0.35
 0.169





13705
Synthetic derivative


embedded image


Inactive
Inactive





13706
Synthetic derivative


embedded image


Inactive
Inactive





13707
Synthetic derivative


embedded image


Inactive
Inactive





13708
Synthetic derivative


embedded image


 0.29
 0.29





13709
Synthetic derivative


embedded image


Inactive
Inactive





13710
Synthetic derivative


embedded image


 0.23
 0.25





13711
Synthetic derivative


embedded image


Inactive
Inactive





13712
Synthetic derivative


embedded image


Inactive
Inactive





13713
Synthetic derivative


embedded image


 0.037






13714
Synthetic derivative


embedded image


Inactive
Inactive





13717
Synthetic derivative


embedded image


 0.49
 0.33





13718
Synthetic derivative


embedded image


 0.37
 0.11





13719
Synthetic derivative


embedded image


 0.11
 0.13





13720
Synthetic derivative


embedded image


Inactive
Inactive





13721
Synthetic derivative


embedded image


Inactive
Inactive





13722
Synthetic derivative


embedded image


Inactive
Inactive





13723
Synthetic derivative


embedded image


Inactive
Inactive





13724
Synthetic derivative


embedded image


Inactive
Inactive





13725
Synthetic derivative


embedded image


Inactive
Inactive





13726
Synthetic derivative


embedded image


Inactive
Inactive





13727
Synthetic derivative


embedded image


Inactive
Inactive





13728
Synthetic derivative


embedded image


Inactive
Inactive





13729
Synthetic derivative


embedded image


Inactive
Inactive





13730
Synthetic derivative


embedded image


 0.149
 0.198





13731
Synthetic derivative


embedded image


 0.304
 0.255





13732
Synthetic derivative


embedded image


 0.42
Not tested





13733
Synthetic derivative


embedded image


 3.815
  0.9194





13736
Synthetic derivative


embedded image


 0.62
 0.68





13738
Synthetic derivative


embedded image


 0.083
 0.062





13741
Synthetic derivative


embedded image


 0.29
 0.29





13742
Synthetic derivative


embedded image


 0.22
0.2





13743
Synthetic derivative


embedded image


 0.38
 0.39





13744
Synthetic derivative


embedded image


 0.76
 0.75





13745
Synthetic derivative


embedded image


 1.01
 0.95





13746
Synthetic derivative


embedded image


Inactive
Inactive





13747
Synthetic derivative


embedded image


Inactive
Inactive





13748
Synthetic derivative


embedded image


Inactive
Inactive





13749
Synthetic derivative


embedded image


 0.29
 0.22





13750
Synthetic derivative


embedded image


Inactive
Inactive





13751
Synthetic derivative


embedded image


Inactive
Inactive





13752
Synthetic derivative


embedded image


 0.37
 0.26





13753
Synthetic derivative


embedded image


 0.16
 0.098





13754
Synthetic derivative


embedded image


 0.09
 0.051





13755
Synthetic derivative


embedded image


 0.47
 0.47





13757
Synthetic derivative


embedded image


Inactive
Inactive





13758
Synthetic derivative


embedded image


Inactive
Inactive





13759
Synthetic derivative


embedded image


0.3
 0.27





13760
Synthetic derivative


embedded image


0.1
 0.052





13761
Synthetic derivative


embedded image


  0.5481
  0.3829





13762
Synthetic derivative


embedded image


  0.4792
 0.429





13764
Synthetic derivative


embedded image


0.1
 0.082





13765
Synthetic derivative


embedded image


Inactive
Inactive





13766
Synthetic derivative


embedded image


 0.045
 0.020





13769
Synthetic derivative


embedded image


Inactive
Inactive





13770
Synthetic derivative


embedded image


0.1
 0.017





13771
Synthetic derivative


embedded image


0.2
 0.090





13772
Synthetic derivative


embedded image


0.2
 0.172





13773
Synthetic derivative


embedded image


0.3
 0.303





13774
Synthetic derivative


embedded image


0.7
 0.773





13775
Synthetic derivative


embedded image


3.7
Not tested





13776
Synthetic derivative


embedded image


 0.21
 0.19





13777
Synthetic derivative


embedded image


Not tested
Not tested





13778
Synthetic derivative


embedded image


Not tested
Not tested





13779
Synthetic derivative


embedded image


Not tested
Not tested





13780
Synthetic derivative


embedded image


Not tested
Not tested





13781
Synthetic derivative


embedded image


Not tested
Not tested





13782
Synthetic derivative


embedded image


 0.11
Not tested





13783
Synthetic derivative


embedded image


Not tested
Not tested





13784
Synthetic derivative


embedded image


Not tested
Not tested





13785
Synthetic derivative


embedded image


 0.036
Not tested





13786
Synthetic derivative


embedded image


 0.013
Not tested





13787
Synthetic derivative


embedded image


 0.19
Not tested





13788
Synthetic derivative


embedded image


Not tested
Not tested





13507
Synthetic derivative


embedded image


Not tested
Not tested





13513
Synthetic derivative


embedded image


Not tested
Not tested





13514
Synthetic derivative


embedded image


Not tested
Not tested





13515
Synthetic derivative


embedded image


Not tested
Not tested





13517
Synthetic derivative


embedded image


Not tested
Not tested





13518
Synthetic derivative


embedded image


Not tested
Not tested





13519
Synthetic derivative


embedded image


Not tested
Not tested





13520
Synthetic derivative


embedded image


Not tested
Not tested





13523
Synthetic derivative


embedded image


Not tested
Not tested





13526
Synthetic derivative


embedded image


Not tested
Not tested





13527
Synthetic derivative


embedded image


Not tested
Not tested





13531
Synthetic derivative


embedded image


Not tested
Not tested





13539
Synthetic derivative


embedded image


Not tested
Not tested





13545
Synthetic derivative


embedded image


Not tested
Not tested





13546
Synthetic derivative


embedded image


Not tested
Not tested





13547
Synthetic derivative


embedded image


Not tested
Not tested










Where a compound is described as “inactive”, no activity was detected for the compound in the assays on which it was tested.


Although various embodiments of the invention are disclosed herein, many adaptations and modifications may be made within the scope of the invention in accordance with the common general knowledge of those skilled in this art. Such modifications include the substitution of known equivalents for any aspect of the invention in order to achieve the same result in substantially the same way. Numeric ranges are inclusive of the numbers defining the range. The word “comprising” is used herein as an open-ended term, substantially equivalent to the phrase “including, but not limited to”, and the word “comprises” has a corresponding meaning. As used herein, the singular forms “a”, “an” and “the” include plural referents unless the context clearly dictates otherwise. Thus, for example, reference to “a thing” includes more than one such thing. Citation of references herein is not an admission that such references are prior art to an embodiment of the present invention. The invention includes all embodiments and variations substantially as hereinbefore described and with reference to the examples and drawings.

Claims
  • 1-20. (canceled)
  • 21. A compound having the structure of Formula I:
  • 22. The compound of claim 21, wherein D is
  • 23. The compound of claim 22, wherein D3 is
  • 24. The compound of claim 22, wherein D3 is
  • 25. The compound of claim 22, wherein D3 is
  • 26. The compound of claim 22, wherein D3 is
  • 27. A compound selected from the group consisting of
  • 28. A pharmaceutical composition comprising a compound or pharmaceutically acceptable salt thereof according to claim 1 and a pharmaceutically acceptable excipient.
  • 29. A pharmaceutical composition comprising a compound or pharmaceutically acceptable salt thereof according to claim 27 and a pharmaceutically acceptable excipient.
  • 30. A method of modulating AR activity, the method comprising (a) administering a compound of claim 1 to a subject in need thereof.
  • 31. The method of claim 30, wherein the modulating AR activity is for the treatment of at least one indication selected from the group consisting of: AR-mediated cancer, prostate cancer, breast cancer, ovarian cancer, endometrial cancer, bladder cancer, Taxene resistant triple negative breast cancer, hair loss, acne, hirsutism, ovarian cysts, polycystic ovary disease, precocious puberty, and age-related macular degeneration.
  • 32. The method of claim 31, wherein the modulating AR activity is for the treatment of prostate cancer.
  • 33. The method of claim 31, wherein the modulating AR activity is for the treatment of Taxene resistant triple negative breast cancer.
  • 34. The method of claim 31, wherein the modulating AR activity is for the treatment of ovarian cancer.
  • 35. The method of claim 31, wherein the modulating AR activity is for the treatment of endometrial cancer.
CROSS REFERENCE TO RELATED APPLICATIONS

This application is a continuation of U.S. application Ser. No. 16/426,406, filed May 30, 2019, which is a divisional application of U.S. application Ser. No. 15/302,363, filed Oct. 6, 2016, now U.S. Pat. No. 10,351,527, which is a National Stage Application of International Patent Application No. PCT/CA2015/000239, filed Apr. 9, 2015; which claims the benefit of U.S. Provisional Patent Application Ser. No. 61/977,445, filed Apr. 9, 2014 and U.S. Provisional Application No. 62/084,451, filed Nov. 25, 2014; all of which are incorporated herein by reference in their entireties.

Provisional Applications (2)
Number Date Country
61977445 Apr 2014 US
62084451 Nov 2014 US
Divisions (1)
Number Date Country
Parent 15302363 Oct 2016 US
Child 16426406 US
Continuations (1)
Number Date Country
Parent 16426406 May 2019 US
Child 16774814 US