Patent Grant
7267821
This application is a 371 National Phase of International Application Serial No. PCT/GB02/02182 filed May 10, 2002 which claims the benefit of priority to United Kingdom Patent Application Serial No. 0111628,4 filed May 10, 2002 all of which are incorporated herein by reference in their entirety.
1. Field of the Invention
The present invention relates to the use of binding members which bind to both Lewisy and Lewisb haptens in the treatment of tumours and leukaemia.
2. Description of the Related Art
The Lewis antigens, which include Lewis y, b, x and a antigens, are blood group antigens. The Lewisy hapten is a difucosylated tetrasaccharide (Fuc 1-2Galβ 1-4(Fucα 1-3)GIcNAc found on type 2 blood group oligosaccharides. This antigen is a positional isomer of the Lewisb hapten (Fuc1-2Galβ1-3(Fucα1-4)GINAc and a fucosylated derivative of the Lewisx hapten. The Lewisy hapten is a cell surface antigen epitope which is expressed by colorectal tumours (Abe et al., Cancer Research, 46, 2639 (1986); Kim et al., Cancer Research, 46, 5985 (1986)).
The mouse monoclonal antibody C14 was raised to the C14gp200 antigen. The mouse monoclonal antibody C14 recognises Lewisy hapten (Brown et al, Biosci. Rep. 3, 163 (1983); Brown et al., Int. J. Cancer, 33, 727) and binds to 78% of colorectal cancers (Durrant et al., J. Natl. Cancer Inst., 81, 688 (1989)).
Other antibodies which bind to the Lewisy hapten are known. For example, EP-B-0285059 discloses an antibody, BR-55, which reacts with both Lewisy and B-7-2. B-7-2 has also been shown to be associated with tumour cells (EP-B-0285059). EP-B-0285059 states that the advantage of recognising two cancer-associated epitopes is that it increases the chances of recognising more tumour cells relative to normal cells. However, BR-55 relies on effector cells in order to be able to kill cells.
In addition, US55869045 discloses an antibody, BR-96, which binds to both Lewisy and Lewisx haptens. Although US5869045 teaches that antibodies which kill cells by themselves are rare, BR-96, has been shown to have the ability to kill cancer cells in unmodified form (US5869045). Since no other Lewisy antibody has been reported to cause direct cytotoxicity, the activity of BR-96 can be assumed to be related to its recognition of the Lewisx hapten.
Antibodies which bind to both Lewisy and Lewisb antigens are known. Studies have demonstrated that C14 monoclonal antibody recognises and binds to both Lewisy and Lewisb (extended and non-extended forms) antigens (Durrant et al., Hybridoma, 12, 647-660 (1993)). A C14 monoclonal antibody specific for both Lewisy and Lewisb antigens was raised against primary colorectal tumour cells using standard fusion protocols. The C14 antibody recognised a range of solid tumours but as it was an IgM, it was not very useful in reproducibly screening large numbers of serum samples. One of the immunological characteristics of carbohydrate antigens is that they usually elicit a T cell independent response, resulting in the production of an IgM antibody.
Subsequently, an anti-idiotypic approach in mice was used to produce an IgG variant of the C14 (IgM) monoclonal antibody. Rats were immunised with C14 monoclonal antibody and rat anti-C14 monoclonal antibody was purified. Immunisation of mice with the rat anti-C14 antiserum and the C14gp200 antigen and subsequent fusion of the immune splenocytes with a mouse myeloma produced five IgG (two IgG3s and three IgG 1s) monoclonal antibodies recognising the Lewisy and Lewisb antigens (Durrant et al., Hybridoma, 12, 647-660 (1993)). Each of the five IgGs (referred to as the “692” monoclonal antibodies) demonstrated the same specificity as C14 (Durrant et al., Hybridoma, 12, 647-660 (1993)). These antibodies were shown by thin layer chromatography and ELISA to bind to extended and non-extended Lewisy and Lewisb haptens but not to Lewisx or H blood group hapten. The antibodies bound to breast, lung, colorectal, gastric, and ovarian tumours and myeloid leukaemia. Recognition of normal tissue was minimal and restricted to weak staining of the upper gastrointestinal tract basement membrane, mucin staining of stomach and fallopian tubes and weak staining of liver capillaries.
The present inventors have now, surprisingly, found that antibodies which bind to both Lewisy and Lewisb haptens induce cell death.
According to a first aspect, the present invention provides the use of a naked binding member which binds to both Lewisy and Lewisb haptens in the preparation of an agent for treating cancer.
The present invention also provides a pharmaceutical composition for the treatment of cancer, the composition comprising a naked binding member that binds to both Lewisy and Lewisb haptens.
The present invention further provides a method of treatment of a patient such as a mammal, such as a method of treatment of cancer in a patient (preferably human) which comprises administering to said patient an effective amount of a naked binding member which binds to both Lewisy and Lewisb haptens.
As used herein, a “binding member” is a member of a pair of molecules which have binding specificity for one another. The binding member is, therefore, a specific binding member. The members of a binding pair may be naturally derived or wholly or partially synthetically produced. One member of the pair of molecules has an area on its surface, which may be a protrusion or a cavity, which specifically binds to and is therefore complementary to a particular spatial and polar organisation of the other member of the pair of molecules. Thus, the members of the pair have the property of binding specifically to each other. Examples of types of binding pairs are antigen-antibody, biotin-avidin, hormone-hormone receptor, receptor-ligand, enzyme-substrate. The present invention is concerned with antigen-antibody type reactions, although a binding member of the invention may be any moiety which can bind to both Lewisy and Lewisb haptens.
An “antibody” is an immunoglobulin, whether natural or partly or wholly synthetically produced. The term also covers any polypeptide, protein or peptide having a binding domain which is, or is homologous to, an antibody binding domain. These can be derived from natural sources, or they may be partly or wholly synthetically produced. Examples of antibodies are the immunoglobulin isotypes and their isotypic subclasses; fragments which comprise an antigen binding domain such as Fab, scFv, Fv, dAb, Fd; and diabodies.
As used herein, “naked” means that the binding member of the present invention is not bound to, or associated with, any agent having anti-tumour properties.
The term “hapten” includes epitopes and antigens. Haptens may be attached to a large carrier molecule such as a cell e.g a tumour cell.
The binding member of the first aspect of the invention may be an antibody such as a monoclonal or polyclonal antibody, or a fragment thereof. The constant region of the antibody may be of any class including, but not limited to, human classes IgG, IgA, IgM, IgD and IgE. The antibody may belong to any sub class e.g. IgG1, IgG2, IgG3 and IgG4. IgG1 is preferred. The antibody may be SC101 (corresponds to, and used interchangeably with, “692” as described in Durrant et al., Hybridoma, 12, 647-660 1993) for example, SC101/23, SC101/29, SC101/33, SC101/42, SC101/43 or C14.
A cell line expressing an antibody which binds to both Lewisy and Lewisb haptens, specifically the cell line SC101/29 has been deposited with ECACC of CAMR, Salisbury Wilshire, SP4 0JG, United Kingdom on May 1, 2001 and was assigned Accession no. 01050118. These cell lines will be maintained at the ECACC during the pendency of this application or any utility application filed there off of and during the term of any patent issuing therefrom in accordance with the rules of the United States Patent and Trademark Office which allows access to the Patent Office during the pendency of the application.
Early investigation by the inventors of the characteristics of SC101 demonstrated that the antibody caused the death of tumour cell-lines in suspension. The inventors have now found that the antibody causes the specific onset of apoptosis or programmed cell-death in colorectal tumour and leukaemia cell-lines and cells derived from disaggregated tumour tissue. Several groups including Terada and Nakanuma, Pathol. Int., 46, 764-770 (1996); Terada and Nakanuma, American J. Pathol., 146, 67-74 (1995); Iwata et al., J. Pathol., 179, 403-408 (1996); Yamada et al., Anticancer Research, 16, 735-740 (1996) have previously used anti-Lewisy antibodies to characterise apoptotic cells; these results suggested that Lewisy was a marker of apoptosis and predominantly over-expressed on dying cells. These findings do not explain why the majority of viable tumour cells also express this hapten or why a member (e.g an antibody) which binds to Lewisy and Lewisb should induce apoptosis.
Recognition of normal tissue by the SC101 antibody is, surprisingly, minimal compared to tumour cells thereby making the antibody an effective anti-cancer agent. Since the Lewisy and Lewisb antigens are expressed on tumour cells and also on normal cells, this finding was contrary to expectation of the art. The minimal binding of the SC101 antibody to normal tissues has the advantage in that a higher dose of the antibody can be used in the treatment of patients whilst avoiding any risk of toxicity to non-cancerous cells.
As used herein, reference to “SC101” and “692” includes sequences which show substantial homology with SC101 and/or 692. Preferably the degree of homology between SC101/692 complementary determining regions (CDRs) and the CDRs of other antibodies will be at least 60%, more preferably 70%, further preferably 80%, even more preferably 90% or most preferably 95%.
The percent identity of two amino acid sequences or of two nucleic acid sequences is determined by aligning the sequences for optimal comparison purposes (e.g., gaps can be introduced in the first sequence for best alignment with the sequence) and comparing the amino acid residues or nucleotides at corresponding positions. The “best alignments” is an alignment of two sequences which results in the highest percent identity. The percent identity is determined by the number of identical amino acid residues or nucleotides in the sequences being compared (i.e., % identity=# of identical positions/total # of positions×100).
The determination of percent identity between two sequences can be accomplished using a mathematical algorithm known to those of skill in the art. An example of a mathematical algorithm for comparing two sequences is the algorithm of Karlin and Altschul (1990) Proc. Natl. Acad. Sci. USA 87:2264-2268, modified as in Karlin and Altschul (1993) Proc. Natl. Acad. Sci. USA 90:5873-5877. The NBLAST and XBLAST programs of Altschul, et al. (1990) J. Mol. Biol. 215:403-410 have incorporated such an algorithm. BLAST nucleotide searches can be performed with the NBLAST program, score=100,wordlength=12 to obtain nucleotide sequences homologous to nucleic acid molecules of the invention. BLAST protein searches can be performed with the XBLAST program, score=50, wordlength=3 to obtain amino acid sequences homologous to protein molecules of the invention. To obtain gapped alignments for comparison purposes, Gapped BLAST can be utilised as described in Altschul et al. (1997) Nucleic Acids Res. 25:3389-3402. Alternatively, PSI-Blast can be used to perform an iterated search which detects distant relationships between molecules (Id.). When utilising BLAST, Gapped BLAST, and PSI-Blast programs, the default parameters of the respective programs (e.g., XBLAST and NBLAST) can be used. See http://www.ncbi.nlm.nih.gov.
Another example of a mathematical algorithm utilised for the comparison of sequences is the algorithm of Myers & Miller, CABIOS (1989). The ALIGN program (version 2.0) which is part of the CGC sequence alignment software package has incorporated such an algorithm. Other algorithms for sequence analysis known in the art include ADVANCE and ADAM as described in Torellis & Robotti (1994) Comput. Appl. Biosci., 10:3-5; and FASTA described in Pearson & Lipman (1988) Proc. Natl. Acad. Sci. 85:2444-8. Within FASTA, ktup is a control option that sets the sensitivity and speed of the search.
Where high degrees of sequence identity are present there will be relatively few differences in amino acid sequence. Thus for example they may be less than 20, less than 10, or even less than 5 differences.
The present inventors have shown that SC101 and fragments and derivatives thereof can be used as cancer therapeutics to inhibit the growth or induce apoptosis of tumour cells as exemplified by the inhibition of growth of tumour cell lines, apoptosis of tumour cell lines and in vivo inhibition of tumour xenografts in nude mice (see the Examples). Accordingly the invention further provides the use of naked “fragments” or “derivatives” of SC101 or other polypeptides of the “SC101” family which bind to both Lewisy and Lewisb epitopes in the preparation of an agent for treating cancer. A preferred group of fragments are those which include all or part of the CDR regions of monoclonal antibody SC101.
The binding member may comprise one or more of the CDRs of the antibody, or a fragment thereof, produced by the cell line deposited as ECACC Accession No. 01050118.
The binding member may be the antibody produced by the cell line deposited as ECACC Accession No. 01050118, or a fragment or derivative thereof.
A fragment of SC101 or of a polypeptide of the SC101 family generally means a stretch of amino acid residues of at least 5 to 7 contiguous amino acids. Often at least about 7 to 9 contiguous amino acids, typically at least about 9 to 13 contiguous amino acids, more preferably at least about 20 to 30 or more contiguous amino acids and most preferably at least about 30 to 40 or more consecutive amino acids.
A “derivative” of SC101 or of a polypeptide of the SC101 family, or of a fragment of SC101 family polypeptide, means a polypeptide modified by varying the amino acid sequence of the protein, e.g. by manipulation of the nucleic acid encoding the protein or by altering the protein itself. Such derivatives of the natural amino acid sequence may involve insertion, addition, deletion and/or substitution of one or more amino acids, while providing a peptide capable of inducing an anti-tumour T-cell response.
Preferably such derivatives involve the insertion, addition, deletion and/or substitution of 25 or fewer amino acids, more preferably of 15 or fewer, even more preferably of 10 or fewer, more preferably still of 4 or fewer and most preferably of 1 or 2 amino acids only.
The present invention further provides products comprising a naked binding member, which binds to both Lewisy and Lewisb haptens, and an active agent as a combined preparation for simultaneous, separate or sequential use in the treatment of cancer. Preferably, the products contain a naked binding member, which binds to both Lewisy and Lewisb haptens, and an active agent as a combined preparation of simultaneous, separate or sequential use in the treatment of cancer. Active agents may include chemotherapeutic agents including, Doxorubicin, taxol, 5-Fluorouracil (5 FU), Leucovorin, Irinotecan, Mitomycin C, Oxaliplatin, Raltitrexed, Tamoxifen and Cisplatin which may operate synergistically with the binding member of the present invention. Other active agents may include suitable doses of pain relief drugs such as nonsteroidal anti-inflammatory drugs (e.g. aspirin, paracetamol, ibuprofen or ketoprofen) or opiates such as morphine, or anti-emetics.
The ability of the binding member to synergise with an active agent to enhance tumour killing may not be due to immune effector mechanisms but rather may be a direct consequence of the binding member binding to cell surface bound glycoproteins.
The binding member of the invention may carry a detectable label.
It is possible to take monoclonal and other antibodies and use techniques of recombinant DNA technology to produce other antibodies or chimeric molecules which retain the specificity of the original antibody. Such techniques may involve introducing DNA encoding the immunoglobulin variable region, or the complementary determining regions (CDRs), of an antibody to the constant regions, or constant regions plus framework regions, of a different immunoglobulin. See, for instance, EP-A-184187, GB 2188638A or EP-A-239400. A hybridoma or other cell producing an antibody may be subject to genetic mutation or other changes, which may or may not alter the binding specificity of antibodies produced.
As antibodies can be modified in a number of ways, the term “antibody” should be construed as covering any binding member or substance having a binding domain with the required specificity. Thus, this term covers antibody fragments, derivatives, functional equivalents and homologues of antibodies, including any polypeptide comprising an immunoglobulin binding domain, whether natural or wholly or partially synthetic. Chimeric molecules comprising an immunoglobulin binding domain, or equivalent, fused to another polypeptide are therefore included. Cloning and expression of chimeric antibodies are described in EP-A-0120694 and EP-A-0125023.
A further aspect of the invention provides an antibody produced by the cell line deposited as ECACC Accession No. 01050118.
It has been shown that fragments of a whole antibody can perform the function of binding antigens. Examples of binding fragments are (i) the Fab fragment consisting of VL, VH, CL and CH1 domains; (ii) the Fd fragment consisting of the VH and CH1 domains; (iii) the Fv fragment consisting of the VL and VH domains of a single antibody; (iv) the dAb fragment (Ward, E. S. et al., Nature 341:544-546 (1989)) which consists of a VH domain; (v) isolated CDR regions; (vi) F(ab′)2 fragments, a bivalent fragment comprising two linked Fab fragments (vii) single chain Fv molecules (scFv), wherein a VH domain and a VL domain are linked by a peptide linker which allows the two domains to associate to form an antigen binding site (Bird et al., Science 242:423-426 (1988); Huston et al., PNAS USA 85:5879-5883 (1988)); (viii) bispecific single chain Fv dimers (PCT/US92/09965) and (ix) “diabodies”, multivalent or multispecific fragments constructed by gene fusion (WO94/13804; P. Hollinger et al., Proc. Natl. Acad. Sci. USA 90:6444-6448 (1993)).
The term “antibody” includes antibodies which have been “humanised”. Methods for making humanised antibodies are known in the art. Methods are described, for example, in Winter, U.S. Pat. No. 5,225,539. A humanised antibody may be a modified antibody having the hypervariable region of monoclonal antibody SC101 and the constant region of a human antibody. Thus the binding member may comprise a human constant region.
The variable region other than the hypervariable region may also be derived from the variable region of a human antibody. The variable region of the antibody outside of the hypervariable region may also be derived from monoclonal antibody SC101. In such case, the entire variable region is derived from murine monoclonal antibody SC101 and the antibody is said to be chimerised. Methods for making chimerised antibodies are known in the art. Such methods include, for example, those described in U.S. patents by Boss (Celltech) and by Cabilly (Genentech). See U.S. Pat. Nos. 4,816,397 and 4,816,567, respectively.
The binding member of the first aspect of the invention binds to Lewisy (Fuc 1-2Galβ 1-4(Fucα1-3)GIcNAc) and Lewisb (Fuc1-2Galβ1-3(Fucα1-4)GlNAc) haptens which may be in extended or non-extended form. The extended forms of Lewisy and Lewisb are as follows:
“Treatment” includes any regime that can benefit a human or non-human animal. The treatment may be in respect of an existing condition or may be prophylactic (preventative treatment).
“Treatment of cancer” includes treatment of conditions caused by cancerous growth and includes the treatment of neoplastic growths or tumours. Tumours may be benign or malignant. Tumours may include colorectal, breast, ovarian, gastric, lung tumours, liver, skin, myeloid (e.g. bone marrow) tumours. Treatment may also be in respect of cancerous tissues or cell lines including, but not limited to, leukaemic cells.
The binding member may, upon binding to Lewisy and Lewisb haptens present on cancerous cells or tissues, including tumour and non-tumour cells, induce apoptosis of cells and inhibit the growth of cells.
Apoptosis is the process by which a cell actively commits suicide. It is now well recognized that apoptosis is essential in many aspects of normal development and is required for maintaining tissue homeostasis. Cell death by suicide, sometimes referred to as programmed cell death, is needed to destroy cells that represent a threat to the integrity of the organism. There are two different mechanisms by which a cell commits suicide by apoptosis. One is triggered by signals arising from within the cell, the other by external signals (e.g molecules) which bind to receptors at the cell surface.
Binding members of the present invention may be administered to a patient in need of treatment via any suitable route, usually by injection into the bloodstream. The precise dose will depend upon a number of factors, including the precise nature of the member (e.g. whole antibody, fragment or diabody), and the nature of the detectable label attached to the member.
Binding members of the present invention will usually be administered in the form of a pharmaceutical composition, which may comprise at least one component in addition to the binding member.
Thus a further aspect provides pharmaceutical compositions according to the present invention, and for use in accordance with the present invention. Pharmaceutical compositions may comprise, in addition to active ingredient, a pharmaceutically acceptable excipient, carrier, buffer stabiliser or other materials well known to those skilled in the art. Such materials should be non-toxic and should not interfere with the efficacy of the active ingredient. The precise nature of the carrier or other material will depend on the route of administration, which may be oral, or by injection, e.g. intravenous.
The formulation may be a liquid, for example, a physiologic salt solution containing non-phosphate buffer at pH 6.8-7.6, or a lyophilised powder.
The compositions are preferably administered to an individual in a “therapeutically effective amount”, this being sufficient to show benefit to the individual. The actual amount administered, and rate and time-course of administration, will depend on the nature and severity of what is being treated. Prescription of treatment, e.g. decisions on dosage etc, is within the responsibility of general practitioners and other medical doctors, and typically takes account of the disorder to be treated, the condition of the individual patient, the site of delivery, the method of administration and other factors known to practitioners. The compositions of the invention are particularly relevant to the treatment of existing cancer and in the prevention of the recurrence of cancer after initial treatment or surgery. Examples of the techniques and protocols mentioned above can be found in Remington's Pharmaceutical Sciences, 16th edition, Oslo, A. (ed), 1980.
The optimal dose can be determined by physicians based on a number of parameters including, for example, age, sex, weight, severity of the condition being treated, the active ingredient being administered and the route of administration. In general, a serum concentration of polypeptides and antibodies that permits saturation of receptors is desirable. A concentration in excess of approximately 0.1 nM is normally sufficient. For example, a dose of 100 mg/m2 of antibody provides a serum concentration of approximately 20 nM for approximately eight days.
As a rough guideline, doses of antibodies may be given weekly in amounts of 10-300 mg/m2. Equivalent doses of antibody fragments should be used at more frequent intervals in order to maintain a serum level in excess of the concentration that permits saturation of Lewisy/b haptens.
Some suitable routes of administration include intravenous, subcutaneous and intramuscular administration. Intravenous administration is preferred.
It is envisaged that injections (intravenous) will be the primary route for therapeutic administration of the compositions although delivery through a catheter or other surgical tubing is also used. Liquid formulations may be utilised after reconstitution from powder formulations.
For intravenous, injection, or injection at the site of affliction, the active ingredient will be in the form of a parenterally acceptable aqueous solution which is pyrogen-free and has suitable pH, isotonicity and stability. Those of relevant skill in the art are well able to prepare suitable solutions using, for example, isotonic vehicles such as Sodium Chloride Injection, Ringer's Injection, Lactated Ringer's Injection. Preservatives, stabilisers, buffers, antioxidants and/or other additives may be included, as required.
Pharmaceutical compositions for oral administration may be in tablet, capsule, powder or liquid form. A tablet may comprise a solid carrier such as gelatin or an adjuvant. Liquid pharmaceutical compositions generally comprise a liquid carrier such as water, petroleum, animal or vegetable oils, mineral oil or synthetic oil. Physiological saline solution, dextrose or other saccharide solution or glycols such as ethylene glycol, propylene glycol or polyethylene glycol may be included.
The composition may also be administered via microspheres, liposomes, other microparticulate delivery systems or sustained release formulations placed in certain tissues including blood. Suitable examples of sustained release carriers include semipermeable polymer matrices in the form of shared articles, e.g. suppositories or microcapsules. Implantable or microcapsular sustained release matrices include polylactides (U.S. Pat. No. 3,773,919; EP-A-0058481) copolymers of L-glutamic acid and gamma ethyl-L-glutamate (Sidman et al, Biopolymers 22(1): 547-556, 1985), poly (2-hydroxyethyl-methacrylate) or ethylene vinyl acetate (Langer et al, J. Biomed. Mater. Res. 15:167-277, 1981, and Langer, Chem. Tech. 12:98-105, 1982). Liposomes containing the polypeptides are prepared by well-known methods: DE 3,218,121A; Epstein et al, PNAS USA, 82: 3688-3692, 1985; Hwang et al, PNAS USA, 77: 4030-4034, 1980; EP-A-0052522; E-A-0036676; EP-A-0088046; EP-A-0143949;EP-A-0142541; JP-A-83-11808; U.S. Pat. Nos. 4,485,045 and 4,544,545. Ordinarily, the liposomes are of the small (about 200-800 Angstroms) unilamellar type in which the lipid content is greater than about 30 mol. % cholesterol, the selected proportion being adjusted for the optimal rate of the polypeptide leakage.
The composition may be administered in a localised manner to a tumour site or other desired site or may be delivered in a manner in which it targets tumour or other cells.
The dose of the composition will be dependent upon the properties of the binding member, e.g. its binding activity and in vivo plasma half-life, the concentration of the polypeptide in the formulation, the administration route, the site and rate of dosage, the clinical tolerance of the patient involved, the pathological condition afflicting the patient and the like, as is well within the skill of the physician. For example, doses of 300 μg of antibody per patient per administration are preferred, although dosages may range from about 10 μg to 6 mg per dose. Different dosages are utilised during a series of sequential inoculations; the practitioner may administer an initial inoculation and then boost with relatively smaller doses of antibody.
This invention is also directed to optimise immunisation schedules for enhancing a protective immune response against cancer.
The binding members of the present invention may be generated wholly or partly by chemical synthesis. The binding members can be readily prepared according to well-established, standard liquid or, preferably, solid-phase peptide synthesis methods, general descriptions of which are broadly available (see, for example, in J. M. Stewart and J. D. Young, Solid Phase Peptide Synthesis, 2nd edition, Pierce Chemical Company, Rockford, Ill. (1984), in M. Bodanzsky and A. Bodanzsky, The Practice of Peptide Synthesis, Springer Verlag, N.Y. (1984); and Applied Biosystems 430A Users Manual, ABI Inc., Foster City, Calif.), or they may be prepared in solution, by the liquid phase method or by any combination of solid-phase, liquid phase and solution chemistry, e.g. by first completing the respective peptide portion and then, if desired and appropriate, after removal of any protecting groups being present, by introduction of the residue X by reaction of the respective carbonic or sulfonic acid or a reactive derivative thereof.
Another convenient way of producing a binding member according to the present invention is to express nucleic acid encoding it, by use of nucleic acid in an expression system.
Thus the present invention further provides the use of an isolated nucleic acid encoding a naked binding member which binds to both Lewisy and Lewisb haptens in the preparation of an agent for treating cancer.
The present invention also provides a pharmaceutical composition for the treatment of cancer, the composition comprising a naked binding member which binds to both Lewisy and Lewisb haptens.
Nucleic acid includes DNA and RNA. In a preferred aspect, the present invention provides a nucleic acid which codes for a binding member of the invention as defined above. The skilled person will be able to determine substitutions, deletions and/or additions to such nucleic acids which will still provide a binding member of the present invention.
Nucleic acid sequences encoding a binding member in accordance with the present invention can be readily prepared by the skilled person using the information and references contained herein and techniques known in the art (for example, see Sambrook, Fritsch and Maniatis, “Molecular Cloning”, A Laboratory Manual, Cold Spring Harbor Laboratory Press, 1989, and Ausubel et al, Short Protocols in Molecular Biology, John Wiley and Sons, 1992), given the nucleic acid sequences and clones available. These techniques include (i) the use of the polymerase chain reaction (PCR) to amplify samples of such nucleic acid, e.g. from genomic sources, (ii) chemical synthesis, or (iii) preparing cDNA sequences. DNA encoding antibody fragments may be generated and used in any suitable way known to those of skill in the art, including by taking encoding DNA, identifying suitable restriction enzyme recognition sites either side of the portion to be expressed, and cutting out said portion from the DNA. The portion may then be operably linked to a suitable promoter in a standard commercially available expression system. Another recombinant approach is to amplify the relevant portion of the DNA with suitable PCR primers. Modifications to the sequences can be made, e.g. using site directed mutagenesis, to lead to the expression of modified peptide or to take account of codon preferences in the host cells used to express the nucleic acid.
The present invention also provides constructs in the form of plasmids, vectors, transcription or expression cassettes which comprise at least one nucleic acid as described above.
The present invention also provides a recombinant host cell which comprises one or more constructs as above. Expression may conveniently be achieved by culturing under appropriate conditions recombinant host cells containing the nucleic acid. Following production by expression a specific binding member may be isolated and/or purified using any suitable technique, then used as appropriate.
Binding members encoding nucleic acid molecules and vectors according to the present invention may be provided isolated and/or purified, e.g. from their natural environment, in substantially pure or homogeneous form, or, in the case of nucleic acid, free or substantially free of nucleic acid or genes origin other than the sequence encoding a polypeptide with the required function. Nucleic acid according to the present invention may comprise DNA or RNA and may be wholly or partially synthetic.
Systems for cloning and expression of a polypeptide in a variety of different host cells are well known. Suitable host cells include bacteria, mammalian cells, yeast and baculovirus systems. Mammalian cell lines available in the art for expression of a heterologous polypeptide include Chinese hamster ovary cells, HeLa cells, baby hamster kidney cells, NSO mouse melanoma cells and many others. A common, preferred bacterial host is E. coli.
The expression of antibodies and antibody fragments in prokaryotic cells such as E. coli is well established in the art. For a review, see for example Plückthun, Bio/Technology 9:545-551 (1991). Expression in eukaryotic cells in culture is also available to those skilled in the art as an option for production of a binding member, see for recent review, for example Reff, Curr. Opinion Biotech. 4:573-576 (1993); Trill et al., Curr. Opinion Biotech. 6:553-560 (1995).
Suitable vectors can be chosen or constructed, containing appropriate regulatory sequences, including promoter sequences, terminator sequences, polyadenylation sequences, enhancer sequences, marker genes and other sequences as appropriate. Vectors may be plasmids, viral e.g. phage, or phagemid, as appropriate. For further details see, for example. Sambrook et al., Molecular Cloning: A Laboratory Manual: 2nd Edition, Cold Spring Harbor Laboratory Press (1989). Many known techniques and protocols for manipulation of nucleic acid, for example in preparation of nucleic acid constructs, mutagenesis, sequencing, introduction of DNA into cells and gene expression, and analysis of proteins, are described in detail in Ausubel et al. eds., Short Protocols in Molecular Biology, 2nd Edition, John Wiley & Sons (1992).
The nucleic acid may be introduced into a host cell by any suitable means.
The introduction may employ any available technique. For eukaryotic cells, suitable techniques may include calcium phosphate transfection, DEAE-Dextran, electroporation, liposome-mediated transfection and transduction using retrovirus or other virus, e.g. vaccinia or, for insect cells, baculovirus. For bacterial cells, suitable techniques may include calcium chloride transformation, electroporation and transfection using bacteriophage.
Marker genes such as antibiotic resistance or sensitivity genes may be used in identifying clones containing nucleic acid of interest, as is well known in the art.
The introduction may be followed by causing or allowing expression from the nucleic acid, e.g. by culturing host cells under conditions for expression of the gene.
The nucleic acid of the invention may be integrated into the genome (e.g. chromosome) of the host cell. Integration may be promoted by inclusion of sequences which promote recombination with the genome in accordance with standard techniques. The nucleic acid may be on an extra-chromosomal vector within the cell, or otherwise identifiably heterologous or foreign to the cell.
The present invention further provides a screening method comprising the step of screening a library of candidate agents for the ability to inhibit the binding of a naked binding member, as defined according to the first aspect of the invention, to Lewisy and Lewisb haptens.
The screening method may comprise any of the following steps:
The screening method may additionally comprise the step of selecting an agent which has the ability to inhibit the binding of the naked binding member to Lewisy and Lewisb haptens, and optionally modifying the agent to optimise the agent for administration as a medicament.
The present invention further provides the use of an agent identified by the screening method of the present invention in the manufacture of a medicament for the treatment of cancer.
Preferred features of each aspect of the invention are as for each of the other aspects mutatis mutandis.
The invention will now be described further in the following non-limiting examples. Reference is made to the accompanying drawings in which:
The invention is now described with reference to the following non-limiting examples;
Methods
Binding to Carbohydrates Separated by Thin Layer Chromatography
Purified glycolipid standards containing Lewisb, Lewisy, trifucosyl Lewisb, trifucosyl Lewisy, H type 1 chain, H type 2 chain, and Lewisx were spotted on the TLC plates were run in a solvent system of Chloroform: methanol: 0.2% Calcium chloride:50:40:10. The plates were then blocked with 5% BSA and then incubated with either Orcinol, panel A or Mabs SC101/23 panel B, Mab SC101/29 panel C, Mab SC101/33 panel D, Mab SC101/42 panel E and Mab C14 panel F. After washing the plates, they were incubated with rabbit anti-mouse IgG and IgM, followed by incubation with 125I labelled protein A. The bands were visualised by autoradiography.
Binding to Carbohydrates as Assayed by ELISA
Microtitre plates were coated with either purified Lewisb or Lewisy glycolipids at (5 ug/ml). After blocking the plates with 5% bovine serum albumin diluted in phosphate buffered saline, purified monoclonal antibodies SC101/23, SC101/29, SC101/33, SC101/42 were added at different concentrations (0.15-20 μg/ml) followed by the additional of peroxidase conjugated goat anti-mouse IgG and IgM. Bound enzyme was detected by optical density reading at 490 nm.
Binding to Freshly Disaggregated Tumour Cells
Colorectal tumours were collected and disaggregated with collagenase (0.05%, Type IV) into highly viable single cell suspensions and assayed for binding with SC101 by indirect immunofluorescence where binding of SC101 was detected with a rabbit anti-mouse anti-serum conjugated to FITC. Stained cells were analysed for fluorescence by a FACS IV cell sorter. Fluroescein fluorescence was excited at 488 nm and collected via a 10 nm band pass filter centred at 515 nm and adjusted to standard conditions using fluorochrome labelled latex beads. Fluorescence intensity is expressed as mean linear fluorescence (MLF), calculated by multiplying the contents of each channel by its channel number and dividing by the total number of cells in the distribution. The FACS IV is set to selectively analyse cells in the malignant cell size range. Each tumour was also stained using normal mouse Ig and the MLF in this control was subtracted from the values obtained with monoclonal antibody. However, the mean binding of normal mouse Ig was 50±25 and therefore tumours were only described as positively staining if the MLF exceeds 50±2s.d.i.e. 100. This was a conservative estimate as background of positively stained cells was calculated as the number of cells with a fluorescence that exceeded the value in which 95% of cells staining with normal mouse immunoglobulin were observed.
Disaggregation of solid tumours yields a mixed population of cells including red blood cells, lymphocytes, stromal cells, macrophages and endothelial cells. The percentage of epithelial cells, as measured by staining of cytokeratin with monoclonal antibody Cam 5.2, was only 22±13% (range 10-60). However, following forward angle light scatter gating to selectively analyse cells in the malignant cell size range 79±4% (range 69-86) of the cells analysed were epithelial. Furthermore the variation between tumours was considerably reduced.
The percentage of lymphocytes, as measured by staining with the monoclonal antibody F10-89-4 (kindly provided by Peter Beverley, Genera Institute), in the total nucleate population was 74±16 (range 40-90). This was considerably reduced to 5.5±5% (range 1-20) following FACS IV gating for malignant cell size. The percentage of stromal cells in the population of cells analysed in the malignant size range was 3.5±3% (range 1-13).
Although the percentage of non-epithelial cells in the forward light scatter gate was low and did not vary considerably between tumours (21±4%). This may have affected the mean linear fluorescence of particular tumours or if they failed to stain contributed to the heterogeneity of staining. Therefore only tumours in which >25% (i.e. 21±34% non epithelial cells) of the cells stained were described as positive.
Binding to Leukaemic Cell Lines
5×104 cells from well characterised myeloid leukaemic cell-lines were incubated with various dilutions of SC101 antibody and left for 1 hour on ice. Following extensive washing the cells were mixed with a FITC labelled anti-mouse conjugate for a further 30 minutes on ice. After washing for a second time the cells were fixed in proprietary cellfix and bound-guorescence measured by flow cytometry.
Binding to Normal Tissues
Binding of SC101 antibody to normal tissues was determined by indirect immunoperoxidase staining of post-mortem samples. Tissue sections (5 μm) of cryopreserved tumour and normal tissues were treated with 0.3% H2O2 in 0.1% NaN3 for 15 min to inhibit endogenous peroxidase. This was followed by incubation at room temperature with 10% human serum and 1% BSA prepared in PBS, for 30 min, and then the mouse SC101 monoclonal antibodies were added at saturating levels which gave minimal non specific background staining for a further 30 min. The bound antibody was detected with rabbit anti-nouse Ig conjugated to peroxidase and following extensive washing the slides were stained with 0.05% diaminobenzidine and 0.01% H2O2 in 0.05M Tris-HCl, pH7.6 and counter stained with haematoxylin.
Results
A monoclonal antibody C14 was raised in mice against primary colorectal tumour cells. This antibody showed good tumour selectivity as it binds to a cell surface antigen over-expressed by a range of tumours and only present at low levels on normal cells. However C14 is an IgM antibody and of limited value for tumour therapy. An antiserum raised in rats to C14 was used to immunise mice and select 5 new IgG monoclonal antibodies. These monoclonal antibodies are referred to as SC101/23, SC101/29, SC101/33, SC101/42, SC101/43. These antibodies were shown to recognise extended and non-extended Lewisy and Lewisb antigens but not Lewisx or H blood group antigen by thin layer chromatography (
Epithelial cells are known to express cytokeratin. These results show that as the majority of the tumours are cytokeratin positive, SC101 recognises cells of epithelial tumour origin.
Staining disaggregated tumour cells with SC101 antibody demonstrates that Lewisy and Lewisb antigens are over-expressed by a wide variety of tumours including colorectal (
Recognition of normal tissue was minimal and restricted to weak staining of the upper gastrointestinal tract basement membrane, mucin staining of stomach and fallopian tubes and weak staining of liver capillaries (Table 1).
A cell line expressing SC101/29 was deposited with ECACC under Accession no. 01050118.
Methods and Results
Experiment 1
5×104 C170 (colorectal tumour) cells were incubated with various dilutions of antibody and left for 1 hour on ice. Following extensive washing the cells were mixed with a FITC labelled anti-mouse conjugate for a further 30 minutes. After washing for a second time the cells were fixed in proprietary cellfix and bound fluorescence measured by flow cytometry. The profiles show the analyses of the forward (FSCH) and side (SSH) scatter measurements made on the treated cells revealing the alteration in cell size and granularity following antibody treatment. During the routine characterisation of this family of antibodies it was noted that disaggregated tumour cells or cultured cell-lines exposed to SC101 rapidly shrank and increased their granularity (see
Experiment 2
1×105 C170, HT29 or HL60 tumour cells in suspension were incubated with various dilutions of SC101 antibody and appropriate controls for 1 hour at room temperature. The cells were then washed, resuspended in proprietary binding buffer and stained with FITC labelled Annexin V and Propidium Iodide. The cells were then analysed by dual colour flow cytometry to determine the number of cells staining positive under the various conditions used. Cells staining with Annexin alone are in the early stages of apoptosis whereas cells staining with both Annexin and propidium iodide are in late stage apoptosis or necrosis.
The results show that Annexin V binding is increased following treatment of C170 cells with SC101 antibody but also reveals that propidium Iodide staining is increased. This dual staining suggests that the positive cells are entering late stage apoptosis. These studies with Annexin-V showed that following a 1 h exposure of cells to SC101, phosphatidylserine was exposed on the outer surface of the cell membrane indicating the onset of apoptosis (see
Experiment 3
3×104 Colorectal C170 cells were aliquoted into individual wells of a flat-bottomed 96-well plate and left to adhere overnight. The following day the cells were treated with various dilutions of SC101 antibody or appropriated controls and left for a further 5 days. The cultures were then washed and stained with crystal violet to determine the number of viable cells left in each well. The results were recorded by optical density at 490 nm and plotted in comparison with suitable negative controls.
Significantly higher concentrations (compared to the concentrations used in those experiments described above) of antibody were required to inhibit the proliferation of adherent cell-lines growing as monolayer cultures (see
Experiment 4
In a further experiment, 3×104 leukaemic HL-60 cells were aliquoted into individual wells of a flat-bottomed 96-well plate. The cells were then treated with various dilutions of SC101 antibody or appropriate controls and left for 5 days. The cultures were then washed and stained with crystal violet to determine the number of viable cells in each well. The results were recorded by optical density at 490 nm and are plotted in comparison with suitable negative controls. The results show that at higher concentrations of SC101 HL-60 cell growth is significantly reduced compared with control cultures. These studies showed that high doses of SC101 could also inhibit the proliferation of HL60 cells in culture (see
Experiment 5
In a further experiment, 1×105 HL-60 myeloid leukaemic cells were incubated with SC101/29 monoclonal antibody appropriate controls at various dilutions, washed and stained with PE conjugated APO2.7 antibody. The cells were then analysed by flow cytometry to determine the number of positively stained cells in each case. The results shown in
Methods and Results
Experiment 1
3×104 Colorectal C170 cells were aliquoted into individual wells of a flat-bottomed 96-well plate and left to adhere overnight The following day the cells were treated with various dilutions of SC101 antibody or appropriate controls for 1 hour at room temperature. The cultures were then washed once and incubated in goat anti-mouse antibody at 100 μg/ml for 30 minutes at room temperature. The cultures were then re-washed and left over night in culture medium with or without cisplatin. The following day the cultures were washed, lysed and tested for the presence of fragmented DNA by a Cyto Death ELISA (Roche). The results were recorded by optical Density measurements at 405 nm.
The plots shown in
Experiment 2
Colorectal tumour cells were exposed to cisplatin (0-0.05 μg/ml) for 4 hrs at 37° C. and then SC101/29 (0-50 μg/ml) antibody was added. The cells were left for 4 days when the number of viable cells was determined by crystal violet staining and optical density reading at 550 nm.
Methods and Results
3×103 C170 cells were plated into microtitre plates and left overnight to adhere. 5FU was added to a final concentrations of 0.25 and 0.5 μg/ml .SC101/29 antibody was also added at concentration of 1-50 μg/ml. Cells were left for 5 days at 37° C. prior to staining with crystal violet and reading the optical density reading at 550 nm to assess the number of cells. As shown in
These studies, in combination with the studies described in Example 3 demonstrate that SC101 increases the sensitivity of cultured C170 cells to the effects of Cisplatin and 5-Fluorouracil and that SC101, Cisplatin and 5-Fluorouracil act synergistically in reducing cell growth (inducing apoptosis).
Methods and Results
Experiment 1—C170 Colorectal Cells.
1×103 Colorectal C170 cells were aliquoted into individual wells of a flat bottomed 96-well plate and left to adhere overnight at 37° C. The following day the cells were treated with Tamoxifen at final concentrations of 10, 3, 1, 0.3, 0.1 and 0 μM. Against each concentration of Tamoxifen the following concentrations of SC101/29 were titrated: 10, 3, 1, 0.3 and 0 μg/ml. As a negative control 791T/36 at concentrations 100, 30, 10, 3 and 0 μg/ml, was titrated against each concentration of Tamoxifen used. Duplicate wells were used. Cells were left for 5 days at 37° C. prior to the addition of MTS reagent to each well and optical density reading at 490 nm.
Experiment 2—MDA-MB468 Breast Cancer Cells.
Using the same method, the effect of SC101/29 alone and in combination with Tamoxifen and Doxorubicin on the growth of the Breast carcinoma cell line MDA-MB-468 was investigated. The effect of SC101/29 alone and in combination with Tamoxifen is shown in
Method and Results
Mice were explanted with 3 mm 3 pieces of C170 xenografts. Groups of mice were treated with 5FU/leucovorin (12.5 mg/Kg) by intravenous infusion on days 1,3,5,7,21 and 22. On the same days mice were also injected intra peritoneally with 0.2 mg of SC101/29 monoclonal antibody. Control mice received either SC101/29 alone or control mouse IgG antibody with 5FU/leucovorin. Tumour size was measured by callipers and tumour cross sectional area calculated on days 12, 16, 19 and 23. At the termination of the experiment tumours were weighed to assess anti-tumour efficacy. Animals were weighed to assess the toxicity of treatment.
SC101 antibody significantly inhibited tumour growth at a dose of 0.2 mg. 12.5 mg/Kg of 5FU/leucovorin also inhibited tumour growth (
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|---|---|---|---|
| 0111628.4 | May 2001 | GB | national |
| Filing Document | Filing Date | Country | Kind | 371c Date |
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| PCT/GB02/02182 | 5/10/2002 | WO | 00 | 5/14/2004 |
| Publishing Document | Publishing Date | Country | Kind |
|---|---|---|---|
| WO02/092126 | 11/21/2002 | WO | A |
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