Biomedical Computing and Visualization Tools for Computer-integrated Diagnostic and Therapeutic Data Science

Information

  • Research Project
  • 10225327
  • ApplicationId
    10225327
  • Core Project Number
    R35GM128877
  • Full Project Number
    5R35GM128877-04
  • Serial Number
    128877
  • FOA Number
    PAR-17-190
  • Sub Project Id
  • Project Start Date
    8/1/2018 - 6 years ago
  • Project End Date
    7/31/2023 - a year ago
  • Program Officer Name
    BRAZHNIK, PAUL
  • Budget Start Date
    8/1/2021 - 3 years ago
  • Budget End Date
    7/31/2022 - 2 years ago
  • Fiscal Year
    2021
  • Support Year
    04
  • Suffix
  • Award Notice Date
    7/22/2021 - 3 years ago

Biomedical Computing and Visualization Tools for Computer-integrated Diagnostic and Therapeutic Data Science

The move toward personalized medicine, in concert with the recent advances in computing, data acquisition, processing and interpretation, is transforming diagnostic and interventional medicine from a traditional artisanal craft based on clinicians? experience into a discipline that relies on objective decision-making based on the integration of multi-dimension and multi-modal data from heterogeneous sources. Computer- integrated diagnostic and interventional data science encompasses the processing, analysis, and interpretation of images and signals to improve the quality of a diagnostic or therapeutic goal. Improvements result from helping clinicians better diagnose disease, predict clinical outcome, better plan, deliver and monitor therapy, as well as advance training and simulation. Despite advances in computer-integrated diagnosis the therapy during the past decade, there has been a delay in introducing large-scale data science techniques into diagnostic, and especially interventional medicine. Although these disciplines have been transformed by the emergence of digital imaging (i.e., histology, pathology, and microscopy), miniature cameras (i.e., endoscopy, and multi- modality medical imaging to ?see? inside the human body, the seamless, wide-spread integration of computer- aided tools as part of the routine diagnostic and surgical environment has been slow. This delay has been attributed to the limited availability of diagnostic and interventional data science techniques that can robustly handle the size, diversity and dimensionality of the acquired data that must be manipulated, often in real time. Ongoing projects in my lab have focused on the development and validation of image-based computing, modeling, and visualization frameworks that 1) help clinicians quantify and track imaging biomarkers to diagnose and monitor disease progression, 2) identify and plan optimal therapeutic routes, and 3) guide, monitor, and deliver therapy under less invasive conditions. These tools have been developed and demonstrated primarily in the context of cardiac applications, orthopedic, lung, brain, and spine applications, in close collaborations with clinicians and industry partners. The long-term vision of the proposed program is to further advance computer-integrated diagnostic and therapeutic data science by continuing the development and validation of new techniques for biomedical computing and visualization. We will leverage our successes and extend our existing computing infrastructure to operate on a wider range of digital data. Their output will supply clinicians with the necessary visualization for diagnostic and therapeutic decision making across different tissues and organs. We will make the developed techniques available to the biomedical research and community whose research necessitates using image-based modeling, simulation, and visualization, as well as to clinician scientists who can promote their clinical translation. This research program will yield innovative biomedical computing and visualization tools that rely on standard-of-care biomedical data and cater to a broad range of minimally invasive diagnosis and therapy applications.

IC Name
NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES
  • Activity
    R35
  • Administering IC
    GM
  • Application Type
    5
  • Direct Cost Amount
    249912
  • Indirect Cost Amount
    107746
  • Total Cost
    357658
  • Sub Project Total Cost
  • ARRA Funded
    False
  • CFDA Code
    859
  • Ed Inst. Type
    BIOMED ENGR/COL ENGR/ENGR STA
  • Funding ICs
    NIGMS:357658\
  • Funding Mechanism
    Non-SBIR/STTR RPGs
  • Study Section
    ZGM1
  • Study Section Name
    Special Emphasis Panel
  • Organization Name
    ROCHESTER INSTITUTE OF TECHNOLOGY
  • Organization Department
    BIOMEDICAL ENGINEERING
  • Organization DUNS
    002223642
  • Organization City
    ROCHESTER
  • Organization State
    NY
  • Organization Country
    UNITED STATES
  • Organization Zip Code
    146235608
  • Organization District
    UNITED STATES