Patent Application
20190128882
The present disclosure relates to a biosensor and a biochip.
Priority is claimed on Japanese Patent Application No. 2016-063490, filed Mar. 28, 2016, Japanese Patent Application No. 2016-104468, filed May 25, 2016, Japanese Patent Application No. 2016-144124, filed Jul. 22, 2016, Japanese Patent Application No. 2016-144125, filed Jul. 22, 2016, and Japanese Patent Application No. 2016-144357, filed Jul. 22, 2016, the content of which is incorporated herein by reference.
As a magnetic sensor, a magnetoresistance effect element such as a giant magnetoresistance effect (GMR) element, a magnetic tunnel junction (TMR) element, and an anisotropic magnetoresistance effect (AMR) element is often used (for example, refer to Published Japanese Translation No. S/H 2005-513475 of the PCT International Publication and Japanese Unexamined Patent Application, First Publication No. 2008-039782). A magnetoresistance effect element is an element whose output resistance value changes according to an input magnetic field, and it is possible to measure a change in the detected magnetic field on the basis of the output resistance value.
As shown in
The present disclosure has been made in view of the above circumstances and provides a biosensor through which a measurement error due to magnetic beads present both on thin lines and between thin lines of a magnetoresistance effect element having a meander structure is avoided and it is possible to detect biomolecules in a sample with high accuracy.
The inventors conducted extensive studies in order to address the above problem, and as a result, found that, when an adsorption prevention film is disposed between thin lines of a magnetoresistance effect element, a measurement error due to magnetic beads present both on thin lines and between thin lines of a magnetoresistance effect element can be avoided, and thereby completed the present disclosure.
That is, the present disclosure is directed to the following aspect.
A biosensor according to a first aspect of the present disclosure is a biosensor for detecting biomolecules in a sample, the biosensor including:
a substrate having a surface in which a first region and a second region disposed adjacent to the first region are formed;
a magnetoresistance effect element that is disposed at least on the first region and is configured for a detected resistance value to be changed based on an input magnetic field;
a protective film that is disposed on both the first region and the second region, covers a surface of the magnetoresistance effect element, is disposed on the top part of the first region and contains an affinity substance capable of recognizing the biomolecule on the outer surface of the first region exclusively; and
an adsorption prevention film that is disposed on at least the top part of the second region and is substantially free of the affinity substance,
wherein the protective film and the adsorption prevention film are made of different materials.
Biosensor
A biosensor according to an embodiment of the present disclosure includes a substrate, a magnetoresistance effect element, a protective film, and an adsorption prevention film.
The substrate has a surface in which a first area and a second area disposed adjacent to the first area are formed.
The magnetoresistance effect element is disposed on at least the first area and is configured such that a resistance value detected according to an input magnetic field varies.
The protective film is disposed on both the first area and the second area and covers a surface of the magnetoresistance effect element, and is disposed on the top part of the first area. In addition, the protective film contains an affinity substance that allows recognition of the biomolecules on the outer surface only on the first area. The adsorption prevention film is disposed on at least the top part of the second area and is substantially free of the affinity substance.
The protective film and the adsorption prevention film are made of different materials.
According to the above aspects of the present invention, a measurement error due to magnetic beads present both on thin lines and between thin lines of the magnetoresistance effect element having a meander structure is avoided, and it is possible to detect biomolecules in a sample with high accuracy.
Here, in this specification, the “biosensor” refers to a sensor that detects biological materials (that may be naturally derived or chemically synthesized) such as enzymes, antigens, antibodies, and nucleic acids (including not only DNA, RNA, and the like but also artificial nucleic acids, for example, LNA).
In addition, “adsorption prevention film” refers to a film for preventing biomolecules or magnetic beads from being adsorbed between thin lines of the magnetoresistance effect element having a meander structure.
When the biosensor of the present embodiment includes an adsorption prevention film that is disposed on at least the top part of the second area and is substantially free of the affinity substance, a measurement error due to magnetic beads present both on thin lines and between thin lines of the magnetoresistance effect element having a meander structure is avoided, and it is possible to detect biomolecules in a sample with high accuracy.
In this specification, “substantially free of an affinity substance” refers to a case in which no affinity substance is contained or a case in which, for example, when an affinity substance is nonspecifically adsorbed onto an adsorption prevention film, the affinity substance is contained only in an amount at which it is not possible to capture biomolecules.
Structure of Biosensor
Differences in structures of biosensors of the present embodiment will be described below with reference to the drawings. Here, in the drawings used in the following descriptions, in order to facilitate understanding of features of the present embodiment, featured parts are enlarged for convenience of illustration in some cases, and dimensional proportions and the like of components are not necessarily the same as those of actual components.
As shown in
In addition,
A first area, a second area, a first plane, and a second plane, which will be described below, are introduced for convenience in order to define a positional relationship between members on an area or plane in a virtual area or plane. Here, on the biosensor of the present embodiment, the first area and the second area are alternately repeatedly provided.
The biosensor 100 of the present embodiment detects biomolecules in a sample.
The biosensor 100 includes a substrate 11, the magnetoresistance effect element 12, a protective film 17, and the adsorption prevention film 16.
The substrate 11 has a surface in which a first area A and a second area B disposed adjacent to the first area A are formed.
The magnetoresistance effect element 12 is disposed on at least the first area A and is configured such that a resistance value detected according to an input magnetic field varies.
The protective film 17 is disposed on both the first area A and the second area B and covers a surface of the magnetoresistance effect element 12 and is disposed on the top part of the first area A. In addition, the protective film 17 contains an affinity substance 19 (hereinafter referred to as a “first affinity substance”) that allows recognition of biomolecules on the outer surface only on the first area A.
The adsorption prevention film 16 is disposed on at least the top part of the second area B and is substantially free of the affinity substance 19.
The protective film 17 and the adsorption prevention film 16 are made of different materials.
The adsorption prevention film 16 is substantially free of the affinity substance 19, and is made of a material different from that of a protective layer 17. Thus, it is possible to reduce adsorption of biomolecules or magnetic beads 14 on the adsorption prevention film. In addition, a measurement error due to magnetic beads present both on thin lines and between thin lines of the magnetoresistance effect element having a meander structure is avoided, and it is possible to detect biomolecules in a sample with high accuracy.
Here, the meaning of “at least” in the sentence of “disposed on at least the first area” regarding the magnetoresistance effect element 12 will be described with reference to
In addition, in the present embodiment, the magnetic beads 14 contain a second affinity substance (not shown) that allows recognition of a part different from the biomolecule recognition part of the first affinity substance 19. The magnetic beads 14 accumulate on the protective film 17 via a first affinity substance-biomolecule-second affinity substance complex. Then, when a magnetic field is horizontally applied (an applied magnetic field 15), a stray magnetic field is generated from the magnetic beads 14 and a stray magnetic field is input to the magnetoresistance effect element 12.
As shown in
In addition, as shown in
A biosensor 200 is the same as the biosensor 100 shown in
In the biosensor 200, the adsorption prevention film 16 is substantially free of the affinity substance 19, and the adsorption prevention film 16, the protective film 17 and the second protective film 20 are made of different materials.
The biosensor 200 shown in
A biosensor 300 is the same as the biosensor 200 shown in
In the biosensor 300, the adsorption prevention film is substantially free of the affinity substance 19, and the adsorption prevention film 16, the protective film 17 and the second protective film 20 are made of different materials.
The biosensor 300 shown in
A biosensor 400 is the same as the biosensor 200 shown in
In the biosensor 400, the adsorption prevention film 16 is substantially free of the affinity substance 19, and the adsorption prevention film 16, the protective film 17 and the second protective film 20 are made of different materials.
The biosensor 400 shown in
The biosensor according to the present embodiment is not limited to those shown in
For example, in the biosensors shown in
Components of Biosensor
Components of the biosensor of the present embodiment will be described below in detail.
Substrate
As a material of the substrate, for example, a semiconductor such as silicon and AlTiC or a conductor, or a material made of an insulator such as alumina or glass may be exemplified, and a form thereof is not particularly limited.
The thickness of the substrate is not particularly limited, but it may be, for example, 400 μm or more and 2000 μm or less. When the thickness of the substrate is in such a range, it is possible to obtain a thin and lightweight biosensor having an appropriate strength.
Here, “the thickness of the substrate” refers to the thickness of the entire substrate. For example, the thickness of the substrate composed of a plurality of layers refers to the total thickness of all layers constituting the substrate.
Magnetoresistance Effect Element
The magnetoresistance effect element is not particularly limited as long as it is an element that uses a phenomenon in which a magnetic field influence is received and an electrical resistance changes. An element of a type including a magnetization fixed layer having a magnetization direction fixed in a certain direction in the plane of the laminate and a magnetization free layer whose magnetization direction changes according to an external magnetic field is preferable. In addition, in the magnetoresistance effect element, preferably, a magnetization fixed direction of the magnetization fixed layer is substantially parallel or substantially antiparallel to a direction of a magnetic field (the applied magnetic field 15) applied for magnetic bead excitation, and is a film surface direction of the magnetoresistance effect element.
In the present embodiment, description including the terms substantially parallel or substantially antiparallel, means approximately parallel or anti-parallel, and includes deviation within a range of 0.1° or more and 10° or less.
In addition, the magnetoresistance effect element includes a magnetization fixed layer, an intermediate layer made of a nonmagnetic conductor or an insulator, and a magnetization free layer, and preferably includes a laminate including the intermediate layer interposed between the magnetization fixed layer and the magnetization free layer.
Here, when the intermediate layer is made of a nonmagnetic conductor, the magnetoresistance effect element is generally called a giant magnetoresistance (GMR) effect element and when the intermediate layer is made of an insulator, the magnetoresistance effect element is called a tunnel type magnetoresistance (TMR) effect element. A resistance of the magnetoresistance effect element changes according to an angle between a magnetization direction of the magnetization fixed layer and an average magnetization direction of the magnetization free layer. Generally, the magnetization direction of the magnetization fixed layer is defined as a magnetic sensing direction.
The magnetization free layer is made of, for example, a soft magnetic film of NiFe or the like. The intermediate layer is made of, for example, a conductor film of Cu or the like or made of an insulator film of an alumina-magnesium oxide or the like.
The magnetization fixed layer is made of an antiferromagnetic film and a magnetization fixed film, and the magnetization fixed film is in contact with the intermediate layer. The antiferromagnetic film is made of, for example, an antiferromagnetic Mn alloy such as IrMn and PtMn. The magnetization fixed film is made of, for example, a ferromagnetic material such as CoFe and NiFe, or may have a configuration in which a Ru thin film layer is interposed between CoFe layers or the like.
Magnetic Beads
Magnetic beads are not particularly limited as long as they are magnetic particles. For example, iron oxide particles may be exemplified. The diameter of the magnetic beads depends on the balance with the area of the protective film. For example, the diameter is preferably 0.01 μm or more and 100 μm or less, more preferably 0.05 μm or more and 50 μm or less, and particularly preferably 0.1 μm or more and 5 μm or less.
The magnetic beads contain a second affinity substance that specifically binds to biomolecules, and capture biomolecules via the second affinity substance. The magnetic beads may be magnetic beads to which a second affinity substance is added by a coating treatment or the like or magnetic beads composed of the second affinity substance itself.
Preferably, the surface of the magnetic beads is coated with a polymer or silica matrix according to biomolecules to be captured. When ligands are desired to be captured as biomolecules, the surface of the magnetic beads is preferably hydrophilic, and when antibodies are desired to be captured as biomolecules, the surface of the magnetic beads is preferably hydrophobic.
Protective Film
The protective film is not particularly limited as long as it can protect the magnetoresistance effect element. Examples of the material of the protective film include oxides such as alumina, silica, titanium oxide, zirconium oxide, indium oxide, tartaric oxide, zinc oxide, gallium oxide, and tin oxide; noble metals such as gold, silver, platinum, rhodium, ruthenium, and palladium; and inorganic substances such as aluminum nitride, and silicon nitride, and organic substances such as a polyimide.
The protective film may be composed of one layer (single layer) or a plurality of layers such as two or more layers. In addition, when the protective film is composed of a plurality of layers, the plurality of layers may be the same as or different from each other, and combinations of the plurality of layers are not particularly limited.
The thickness of the protective film is preferably 1 nm or more and 1000 nm or less, more preferably 1 nm or more and 100 nm or less, and particularly preferably 1 nm or more and 15 nm or less.
Here, “the thickness of the protective film” refers to the thickness of the entire protective film. For example, the thickness of the protective film composed of a plurality of layers refers to the total thickness of all layers constituting the protective film.
The outer surface of the protective film is a surface that comes in contact with biomolecules in a sample. The outer surface contains a first affinity substance that specifically binds to biomolecules to be detected. In addition, the magnetic beads also contain a second affinity substance that specifically binds to biomolecules.
When these affinity substances are contained, biomolecules are fixed to the outer surface of the protective film via the first affinity substance only if there are biomolecules to be detected in a sample (in a specimen). Next, magnetic beads bind to biomolecules via the second affinity substance and thus the magnetic beads are fixed to the surface of the protective film.
Examples of the biomolecules to be detected include nucleic acids (that may be naturally derived or chemically synthesized) such as DNA, mRNA, miRNA, siRNA, and artificial nucleic acids (for example, locked nucleic acid (LNA), bridged nucleic acid (BNA)); peptides such as ligands, cytokines, and hormones; proteins such as receptors, enzymes, antigens, and antibodies; cells, viruses, bacteria, and fungi.
Examples of the sample containing biomolecules to be detected include blood, serum, plasma, urine, buffy coat, saliva, semen, thoracic exudates, cerebrospinal fluids, tears, sputum, mucosa, lymph fluids, abdominal fluids, pleural effusion, amniotic fluids, bladder irrigation fluids, bronchoalveolar lavage fluids, cell extraction liquids, and cell culture supernatants.
In addition, the biomolecules to be detected may be biomolecules to be detected with which other biomolecules are complexed or biomolecules to be detected which are converted into other biomolecules. For example, a complex obtained by hybridizing DNA having biotin at the end with RNA (hereinafter referred to as an “RNA-DNA-biotin complex”) may be exemplified. When biotin is added to RNA by complexation, it can be specifically bound to streptavidin. Therefore, for example, when RNA or DNA that is hybridizable with a nucleic acid part in which RNA or DNA contained in the RNA-DNA-biotin complex is not hybridized is used as the first affinity substance, they are captured on the biosensor of the present embodiment. In addition, when streptavidin is used as the second affinity substance, it is possible to specifically detect the RNA-DNA-biotin complex.
For the first affinity substance and the second affinity substance which specifically bind to biomolecules, when biomolecules to be detected are nucleic acids, nucleic acids complementary to the nucleic acids may be exemplified. When biomolecules to be detected are antigens, antibodies having affinity for antigens may be exemplified. When biomolecules to be detected are primary antibodies, antigens having affinity for primary antibodies and secondary antibodies may be exemplified. When biomolecules to be detected are cells, viruses, bacteria, fungi, or the like, antibodies that recognize antigens presented on surfaces thereof may be exemplified.
When biomolecules to be detected are miRNA present in blood, for example, a first nucleic acid complementary to 10 bases at the 5′ end of miRNA may be exemplified as the first affinity substance and a second nucleic acid complementary to 10 bases at the 3′ end of miRNA may be exemplified as the second affinity substance.
When biomolecules to be detected are antigen proteins present in blood, for example, first antibodies that recognize the antigen proteins may be exemplified as the first affinity substance, and second antibodies that recognize the antigen proteins and have a different epitope from the first antibodies may be exemplified as the second affinity substance.
When the first affinity substance is an antibody, the antibody can be prepared, for example, by immunizing a rodent animal such as a mouse with a labeled peptide as an antigen. In addition, for example, this can be prepared by phage library screening. The antibody may be an antibody fragment and Fv, Fab, scFv, and the like may be exemplified as the antibody fragment.
While an example in which magnetic beads are bound to biomolecules fixed to the surface of the protective film has been exemplified in the above description, the present embodiment is not limited thereto. Biomolecules to be detected may be bound to magnetic beads in advance, and they may be brought into contact with the surface of the protective film as a sample.
As a method of fixing magnetic beads to the surface of the protective film covering the magnetoresistance effect element, any technology that has been developed in the past or will be developed in the future can be applied and any method may be used as long as it is possible to indirectly detect the presence of biomolecules to be detected by measuring magnetic beads.
As a method of fixing an affinity substance to a surface of a protective film, for example, when a constituent material of the protective film disposed on the top part is a noble metal, a thiol group, an isothiocyanate group or a disulfide group derived from the affinity substance or introduced into the affinity substance forms a thiolate bond with the surface of the noble metal, and the affinity substance can be fixed.
In addition, when a constituent material of the protective film disposed on the top part is an oxide, it is possible to fix the affinity substance via a silane coupling agent or phosphonic acid derivatives having a functional group that can bind to the affinity sub stance.
The functional group is not particularly limited as long as it is a group that can be covalently bonded or non-covalently bonded to the affinity substance. For example, a chemically active (that is, activated so that the reactivity with the first affinity substance becomes higher) group, a receptor group, and a ligand group may be exemplified. The affinity substance may be modified so that a covalent bond or non-covalent bond with a functional group can be made.
As a specific example, an activated carboxyl-derived group, a carboxyl group, an aldehyde group, an epoxy group, a vinyl sulfone group, a biotinyl group, a thiol group, an amino group, an isocyanate group, an isothiocyanate group, a hydroxyl group, an acrylate group, a maleimide group, a hydrazide group, an aminooxy group, an azide group, an amide group, a sulfonate group, avidin, streptavidin, and a metal chelate may be exemplified, but the present disclosure is not limited thereto. Among these, generally, since many of the affinity substances have an amino group, in consideration of the reactivity with the amino group, an aldehyde group, an activated carboxyl-derived group, an epoxy group, and a vinylsulfone group are preferable and a biotinyl group having a high coupling constant is preferable. In particular, when the first affinity substance has an amino group and is bonded via the amino group, an activated carboxyl-derived group is preferable in consideration of the balance between the reactivity with the amino group and the storage stability. On the other hand, when first affinity substance has an aldehyde group and is bonded via the aldehyde group, since the reactivity is high, an aminooxy group or a hydrazide group is preferable.
As the phosphonic acid derivatives, for example, alkylphosphonic acid, alkenylphosphonic acid, and phenylphosphonic acid may be exemplified. As the phosphonic acid derivatives, more specifically, vinylphosphonic acid (CH2═CH—PO3H2), propene-1-phosphonic acid (CH3—CH═CH—PO3H2), and propene-2-phosphonic acid (CH2═CH(CH3)—PO3H2) may be exemplified and those into which a functional group is introduced may be used. As phosphonic acid derivatives having a functional group, for example, 2,5-dicarboxyphenylphosphonic acid, 3,5-dicarboxyphenylphosphonic acid, and 2,5-bisphosphonoterephthalic acid may be exemplified.
As a silane coupling agent having a functional group, for example, trimethoxysilylbenzoic acid, γ-methacryloxypropyltrimethoxysilane, vinyltriacetoxysilane, vinyltrimethoxysilane, γ-isocyanatopropyltriethoxysilane, γ-glycidoxypropyltrimethoxysilane, β-(3,4-epoxycyclohexyl)ethyltrimethoxysilane, tris-(3-trimethoxysilylpropyl)isocyanurate, methacryloxypropyldimethylmethoxysilane, methacryloxypropyldimethylethoxysilane, methacryloxypropylmethyldimethoxysilane, methacryloxypropylmethyldiethoxysilane, methacryloxypropyltrimethoxysilane, methacryloxypropyltriethoxysilane, 3-mercaptopropyltrimethoxysilane, 3-mercaptopropyltriethoxysilane, 3-mercaptopropylmethyldimethoxysilane, 3-mercaptopropylmethyldiethoxysilane, 3-mercaptopropyldimethylmethoxysilane, 3-mercaptopropyldimethylethoxysilane, and mercaptoethyltriethoxysilane may be exemplified.
A more specific method of fixing the affinity substance to the surface of the protective film can be determined by those skilled in the art using known methods according to a type of the affinity substance. For example, a method in which a solution containing an affinity substance is brought into contact with a protective film together with a silane coupling agent or phosphonic acid derivatives having a functional group that covalently bonds with the affinity substance may be exemplified.
For example, when a material constituting the protective film is an oxide and an affinity substance having an amino group is fixed via a silane coupling agent having a carboxyl group, if the surface of the protective film that is in contact with a solution in which a first affinity substance and a silane coupling agent are mixed into a general buffer solution with a pH of 7.0 or more and 10.0 or less is incubated for a predetermined time, the amino group of the affinity substance and the carboxyl group of the silane coupling agent react to form an amide bond, and additionally the silane coupling agent and the surface of the protective film react to form an ether bond, and thus the affinity substance can be fixed to the outer surface of the protective film. Examples of the buffer solution include a phosphate buffer solution, and a tris buffer solution.
Adsorption Prevention Film
The adsorption prevention film is not particularly limited as long as it can prevent biomolecules or magnetic beads from being adsorbed between thin lines of the magnetoresistance effect element having a meander structure. Examples of the material of the adsorption prevention film include oxides such as alumina, silica, titanium oxide, zirconium oxide, indium oxide, tartaric oxide, zinc oxide, gallium oxide, and tin oxide; and inorganic substances of noble metals such as gold, silver, platinum, rhodium, ruthenium, and palladium.
In addition, when a material constituting the protective film is a noble metal, a material constituting the adsorption prevention film is preferably an oxide. On the other hand, when a material constituting the protective film is an oxide, a material constituting the adsorption prevention film is preferably a noble metal.
When materials constituting the protective film and the adsorption prevention film are different from each other and additionally combined as above, the affinity substance is selectively fixed only to the protective film. In addition, the adsorption prevention film is substantially free of the affinity substance, and nonspecific adsorption of biomolecules or magnetic beads on the adsorption prevention film is reduced. Thus, a measurement error due to magnetic beads present both on thin lines and between thin lines of the magnetoresistance effect element having a meander structure is avoided, and it is possible to detect biomolecules in a sample with high accuracy.
The adsorption prevention film may be composed of one layer (single layer) or a plurality of layers such as two or more layers. In addition, when the adsorption prevention film is composed of a plurality of layers, the plurality of layers may be the same as or different from each other, and combinations of the plurality of layers are not particularly limited.
The thickness of the adsorption prevention film is preferably 1 nm or more and 1000 nm or less, more preferably 1 nm or more and 100 nm or less, and particularly preferably 1 nm or more and 15 nm or less.
Here, “the thickness of the adsorption prevention film” refers to the thickness of the entire adsorption prevention film. For example, the thickness of the adsorption prevention film composed of a plurality of layers refers to the total thickness of all layers constituting the adsorption prevention film.
In addition, the adsorption prevention film preferably contains a substance (nonspecific adsorption inhibiting substance) that reduces nonspecific adsorption of biomolecules on the outer surface. When the adsorption prevention film contains a nonspecific adsorption inhibiting substance, it is possible to more effectively reduce nonspecific adsorption of biomolecules or magnetic beads.
The nonspecific adsorption inhibiting substance may be any monomer or polymer as long as it has a fixing group on the adsorption prevention film at an end and has a biocompatible group at the other end or in a compound.
When a material constituting the adsorption prevention film is a noble metal, examples of the fixing group include a thiol group, an isothiocyanate group, and a disulfide group. On the other hand, when a material constituting the adsorption prevention film is an oxide, examples of the fixing group include an alkoxysilane group and a phosphonic acid group.
The biocompatible group has an excellent nonspecific adsorption inhibiting effect. As the biocompatible group, specifically, a phosphorylcholine group, (poly)alkylene glycol residues, a sulfoalkyl amino group, and the like may be exemplified. As the nonspecific adsorption inhibiting substance in the present embodiment, for example, a polymer compound having a biocompatible group that is produced by polymerizing monomers having such a biocompatible group may be produced and used.
When the nonspecific adsorption inhibiting substance is a monomer, the nonspecific adsorption inhibiting substance is subjected to molecular self assembly (MSA) and forms a monomolecular film.
In this specification, “molecular self assembly” means that tissues or structures are naturally formed by molecules themselves without being controlled by external factors.
In the nonspecific adsorption inhibiting substance in the present embodiment, a weak intermolecular bond such as Van der Waals coupling is used, nonspecific adsorption inhibiting substances are aligned and bonded to form one monomolecular film (self-assembled monolayers (SAMs)).
Examples of the monomer having a phosphorylcholine group include (meth)acryloyloxyalkylphosphorylcholines such as 2-methacryloyloxyethyl phosphorylcholine and 6-methacryloyloxyhexylphosphorylcholine; (meth)acryloyloxyalkoxyalkylphosphorylcholines such as 2-methacryloyloxyethoxyethyl phosphorylcholine and 10-methacryloyloxyethoxy nonyl phosphorylcholine; and alkenyl phosphorylcholines such as allyl phosphorylcholine, butenylphosphorylcholine, hexenyl phosphorylcholine, octenyl phosphorylcholine, and decenyl phosphorylcholine. As the nonspecific adsorption inhibiting substance of the present embodiment, those in which the fixing group is introduced into an end opposite to the phosphocholine group may be used.
In this specification, “alkylene glycol residue” refers to an alkyleneoxy group (—R—O—, here, R denotes an alkylene group) which remains after hydroxyl groups at one end or both ends of an alkylene glycol (HO—R—OH, here, R denotes an alkylene group) undergo a condensation reaction with another compound. For example, in the case of methylene glycol (HO—CH2—OH), the alkylene glycol residue is a methyleneoxy group (—CH2—O—), and in the case of ethylene glycol (HO—CH2CH2—OH), the alkylene glycol residue is an ethyleneoxy group (—CH2CH2—O—). In addition, “polyalkylene glycol residue” refers to a structure in which a plurality of alkyleneoxy groups are repeated.
Examples of the monomer having an alkylene glycol residue include methoxy polyethylene glycol (meth)acrylate, ethoxypolyethylene glycol (meth)acrylate, 2-hydroxyethyl (meth)acrylate and monosubstituted esters of its hydroxyl group, 2-hydroxypropyl (meth)acrylate and monosubstituted esters of its hydroxyl group, 2-hydroxybutyl (meth)acrylate and monosubstituted esters of its hydroxyl group, glycerol mono (meth)acrylate, (meth)acrylate having polypropylene glycol as side chain, 2-methoxyethyl (meth)acrylate, 2-ethoxyethyl (meth)acrylate, methoxydiethylene glycol (meth)acrylate, ethoxydiethyleneglycol (meth)acrylate, and ethoxypolyethylene glycol (meth)acrylate. In addition, the average number of repetitions of the alkylene glycol residue is preferably 5 or more and 90 or less.
When the average number of repetitions of the alkylene glycol residue is within the above range, excellent operability (handling) during synthesis is obtained.
As the nonspecific adsorption inhibiting substance of the present embodiment, those in which the fixing group is introduced into any end of the monomer having the alkylene glycol residue may be used.
Examples of the monomer having a sulfoalkyl amino group include N-methyl-N-(3-sulfopropyl)acrylamide, 3-(N,N-dimethylmyristylammonio)propanesulfonic acid (3-(N,N-dimethylmyristylammonio)propanesulfonate, and SB3-14, myristyl sulfobetaine). As the nonspecific adsorption inhibiting substance of the present embodiment, those in which the fixing group is introduced into an end opposite to such a sulfo group may be used.
As a method of introducing the fixing group into a monomer having the biocompatible group, a known method may be used according to a fixing type to be introduced. For example, when the fixing group is a thiol group, within the monomer having the biocompatible group, at least one hydrogen bonded to carbon into which a fixing group is introduced is substituted with a halogen atom (for example, chlorine, bromine, iodine, etc.), and hydrogen sulfide is then reacted in the presence of alkali, and thus a thiol group can be introduced.
Alternatively, the biocompatible group may be introduced into the silane coupling agent or phosphocholine derivatives exemplified in the above <<Method of fixing affinity substance to protective film>> using a known method.
As the nonspecific adsorption inhibiting substance of the present embodiment, more specifically, for example, 3-[(11-mercaptoundecyl)-N,N-dimethylammonio] propanesulfonate which is a sulfobetaine type alkane thiol may be exemplified.
As a method of fixing the nonspecific adsorption inhibiting substance to the surface of the adsorption prevention film, for example, when a constituent material of the adsorption prevention film is a noble metal, a nonspecific adsorption inhibiting substance having a thiol group, an isothiocyanate group or a disulfide group as a fixing group may be used, the fixing group and the surface of the noble metal form a thiolate bond, and the nonspecific adsorption inhibiting substance can be fixed.
In addition, when a constituent material of the adsorption prevention film is an oxide, a nonspecific adsorption inhibiting substance having an alkoxysilane group or a phosphonic acid group as a fixing group may be used and the fixing group and the surface of the oxide form an ether bond, and the nonspecific adsorption inhibiting substance can be fixed.
A more specific method of fixing the nonspecific adsorption inhibiting substance to the surface of the adsorption prevention film can be determined by those skilled in the art by a known method according to a constituent material of the adsorption prevention film. For example, a method in which a solution containing a nonspecific adsorption inhibiting substance is brought into contact with an adsorption prevention film may be exemplified.
For example, when a material constituting the protective film is an oxide and a nonspecific adsorption inhibiting substance having an alkoxysilane group is fixed, if the surface of the adsorption prevention film that is in contact with a solution in which a nonspecific adsorption inhibiting substance is mixed into a general buffer solution with a pH of 7.0 or more and 10.0 or less is incubated for a predetermined time, the nonspecific adsorption inhibiting substance can be fixed to the surface of the adsorption prevention film via an ether bond. Examples of the buffer solution include a phosphate buffer solution, and a tris buffer solution.
Other Components
Electrode Terminal
The electrode terminal may be disposed on the same plane as the magnetoresistance effect element or disposed on a plane different from the magnetoresistance effect element. The electrode terminal is connected to the magnetoresistance effect element through contact therewith and can output a change in resistance of the magnetoresistance effect element as an output to the outside. In addition, when the electrode terminal is disposed on a plane different from the magnetoresistance effect element, it may be disposed directly above the magnetoresistance effect element, and connected to the magnetoresistance element through contact therewith (refer to
Insulating Layer
When the substrate is made of a conductive material, the insulating layer is formed on the main surface of the substrate and an electrical short circuit via the substrate can be prevented. For example, an inorganic substance such as alumina, aluminum nitride, silicon oxide, or silicon nitride or an organic substance such as a polyimide is preferably used as a material of the insulating layer.
Applied Magnetic Field and Detection Magnetic Field
When magnetic beads accumulate on the protective film via biomolecules and a magnetic field (applied magnetic field) is horizontally applied as shown in
The detection magnetic field (stray magnetic field) is influenced by a proportion of magnetic beads occupying the main surface of the magnetoresistance effect element via the protective film. As the number of magnetic beads accumulated on the protective film increases, a detected resistance value changes. The number of magnetic beads accumulated on the protective film and the detected resistance value via the stray magnetic field are linearly correlated.
Then, based on the titer (for example, the number of biomolecules that the second affinity substance captures) of the second affinity substance included in the magnetic beads, it is possible to calculate the number of biomolecules accumulated on the protective film.
That is, according to the biosensor of the present embodiment, the number of biomolecules contained in a sample can be calculated. In this manner, in the biosensor of the present embodiment, it is possible to secure quantitation of biomolecules in a sample with high accuracy.
In addition, the biosensor of the present embodiment has high sensitivity, and can perform detection at a level of tens of nanotesla. Specifically, it is possible to detect an increase or decrease of 10 with respect to 1500 magnetic beads. That is, a change of about 0.5% can be detected.
In addition, since the biosensor of the present embodiment uses magnetic beads, it has higher sensitivity and a longer lifespan compared to fluorescence. Therefore, it is much better than a detection method such as ELISA.
Method of Producing Biosensor
The biosensor of the present embodiment can be produced using a known method according to sequential lamination so that it has a corresponding positional relationship among the above components.
In addition, a method of fixing an affinity substance to a protective film is the same as the <<Method of fixing affinity substance to protective film>> described above.
In addition, a method of fixing a nonspecific adsorption inhibiting substance to an adsorption prevention film is the same as the <<Method of fixing nonspecific adsorption inhibiting substance to adsorption prevention film>> described above.
Method of Using Biosensor
Method of Detecting Biomolecules
The biosensor of the present embodiment can be used for, for example, a method of detecting biomolecules to be described below.
First, a sample containing biomolecules is brought into contact with a protective film, and the biomolecules accumulate on the protective film via the first affinity substance (Process 1). Next, magnetic beads are brought into contact with the protective film and accumulate on the protective film via the biomolecules (Process 2). Next, a magnetic field is applied in a direction crossing the main surface of the magnetoresistance effect element, a detection magnetic field is input to the magnetoresistance effect element, and a resistance value is detected (Process 3).
The processes will be described in detail.
Process 1 is a process in which a sample containing biomolecules is brought into contact with a protective film and the biomolecule accumulate on the protective film via a first affinity substance. In consideration of convenience and the like, the biosensor is preferably used in a microfluidic device. In Process 1, first, a sample containing biomolecules flow through a micro flow path. The sample not particularly limited as long as it contains biomolecules to be detected. As a sample, for example, when the method of detecting biomolecules of the present embodiment is used for diagnosis of a disease, a sample derived from a subject such as a person in whom onset of a disease was confirmed or a person in whom onset of a disease was suspected, or a sample derived from a subject such as a patient being treated for a disease may be exemplified. As the sample, more specifically, the same as those exemplified in “∘ Protective film” above may be used.
For example, when peptides and proteins such as antigens and receptors present on the surface of blood circulating tumor cells are to be detected, a sample may be caused to directly flow through the micro flow path. For example, it has been reported that miRNA is involved in onset and progress of cancer, cardiovascular diseases, neurodegenerative diseases, mental illness, chronic inflammatory diseases and the like. When nucleic acids such as genomic DNA, cDNA, Total RNA, mRNA, and rRNA including miRNA are to be detected, a nucleic acid is preferably extracted from the biological sample. The extraction method is appropriately selected from conventional methods according to a type of nucleic acid.
Biomolecules in a sample which flows through a micro flow path are captured by the first affinity substance on the protective film and accumulate on the protective film. As the first affinity substance, nucleic acids, antibodies, and the like may be exemplified as described above. The biomolecules form a complex with the first affinity substance on the protective film according to hybridization, an antigen and antibody reaction, and the like.
After the first affinity substance-biomolecule complex is formed on the protective film, the protective film is preferably washed using a buffer solution or the like. According to washing, impurities that are nonspecifically bound to the protective film can be removed and detection accuracy of the biomolecules can be improved. Examples of the buffer solution include a phosphate buffer solution, and a tris buffer solution.
Process 2 is a process in which magnetic beads are brought into contact with a protective film and accumulate on the protective film via the biomolecules. As described above, the magnetic beads contain a second affinity substance that captures biomolecules. For example, when magnetic beads flow through a micro flow path and come in contact with the protective film, they bind to biomolecules in the first affinity substance-biomolecule complex formed on the protective film via the second affinity substance. In Process 2, a first affinity substance-biomolecule-second affinity substance complex is formed on the protective film. That is, the magnetic beads containing the second affinity substance accumulate on the protective film.
After the first affinity substance-biomolecule-second affinity substance complex is formed on the protective film, the protective film is preferably washed with a buffer solution or the like as in Process 1. According to washing, the magnetic beads that are nonspecifically bound to the protective film can be removed, and detection accuracy of the biomolecule can be improved. As the buffer solution, the same ones exemplified in [Process 1] may be exemplified.
Process 3 is a process in which a magnetic field is applied in a direction crossing the main surface of the magnetoresistance effect element, a detection magnetic field is input to the magnetoresistance effect element, and a resistance value is detected.
The detection magnetic field (stray magnetic field) is influenced by a proportion of magnetic beads occupying the main surface of the magnetoresistance effect element via the protective film. As the number of magnetic beads accumulated on the protective film increases, a detected resistance value increases.
According to Process 3, it is possible to quantify accurately the number of magnetic beads accumulated on the protective film. Then, based on the titer (for example, the number of biomolecules that the second affinity substance captures) of the second affinity substance included in the magnetic beads, it is possible to calculate the number of all biomolecules accumulated on the protective film. That is, according to the detection method of the present embodiment, it is possible to calculate the number of biomolecules contained in a sample. Therefore, when there is a positive correlation between the number of biomolecules in a sample and a disease state, if the number of biomolecules in the sample is successively calculated, it is possible to perform follow-up observation of the disease state.
As described above, in the detection method of the present embodiment, it is possible to secure quantitation of biomolecules in a sample.
As another use example of the biosensor of the present embodiment, a method of detecting biomolecules to be described below may be used.
First, a sample containing biomolecules and magnetic beads are mixed tighter and the biomolecules are captured by the magnetic beads via the second affinity substance (Process 4). Next, magnetic beads that have captured biomolecules are brought into contact with a protective film and the magnetic beads accumulate on the protective film via the biomolecules (Process 5). Next, a magnetic field is applied in a direction crossing the magnetoresistance effect element, a detection magnetic field is input to the magnetoresistance effect element, and a resistance value is detected (Process 3).
Since this method is the same as the method of detecting biomolecules including the above [Process 1] to [Process 3] except that, when a first affinity substance-biomolecule-second affinity substance complex is formed, a biomolecule-second affinity substance complex is formed in advance, description thereof will be omitted.
Biochip
The biosensor of the present embodiment can be applied to a biochip.
When a plurality of biosensors with different first affinity substances on the protective film are provided, the biochip of the present embodiment can comprehensively analyze properties of a sample.
As the biochip, for example, a biochip for cancer diagnosis, a biochip for carcinoma diagnosis, and a biochip for detecting influenza virus may be exemplified.
Biochip for Cancer Diagnosis
As the first affinity substance provided on the protective film, a nucleic acid complementary to a nucleic acid derived from a cancer gene or a cancer inhibiting gene may be exemplified. When there is a mutation specific to a cancer patient in the cancer gene or the cancer inhibiting gene, a nucleic acid complementary to the nucleic acid containing the mutation is preferable.
As the cancer gene, a gene group that encodes a growth factor such as sis; a gene group that encodes a receptor type tyrosine kinase such as erbB, fms, and ret; a gene group that encodes a non-receptor type tyrosine kinase such as fes; a gene group that encodes a GTP/GDP binding protein such as ras; a gene group that encodes a serine/threonine kinase such as src, mos, and raf; a gene group that encodes a nuclear protein such as myc, myb, fos, jun, and erbA; a gene group that encodes a signal transducing adapter molecule such as crk; and a fusion gene such as Bcr-Abl may be exemplified.
In addition, as the cancer gene, a Ras-MAP kinase pathway-linked gene such as Shc, Grb2, Sos, MEK, Rho, and Rac genes; a phospholipase C gamma-protein kinase C pathway-linked gene such as PLCy and PKC; a PI3K-Akt pathway-linked gene such as PI3K, Akt, and Bad; a JAK-STAT pathway-linked gene such as JAK and STAT; and a GAP-related pathway-linked gene such as GAP, p180, and p62 may be exemplified.
Examples of the cancer inhibiting gene include RB, p53, WT1, NF1, APC, VHL, NF2, p16, p19, BRCA1, BRCA2, PTEN, and E cadherin gene.
In addition, as the first affinity substance, a substance that captures a protein which is a genetic product of the above genes, for example, an antibody (including an antibody fragment), an aptamer, a ligand, and a receptor may be used.
Biochip for Diagnosis for Specific Type of Cancer
In the biochip of the present embodiment, a first affinity substance provided on a protective film may be a nucleic acid complementary to a plurality of nucleic acids that are extracted from one type of cancer. That is, the biochip of the present embodiment may be a biochip for diagnosis of a specific type of cancer.
The target cancer is not particularly limited, and, for example, breast cancer (for example, invasive ductal carcinoma, noninvasive ductal carcinoma, Inflammatory breast cancer, etc.), prostate cancer (for example, hormone-dependent prostate cancer, hormone-independent prostate cancer, etc.), pancreatic cancer (for example, pancreatic duct cancer, etc.), stomach cancer (for example, papillary adenocarcinoma, mucinous adenocarcinoma, adenosquamous carcinoma, etc.), lung cancer (for example, non small cell lung cancer, small cell lung cancer, malignant mesothelioma, etc.), colon cancer (for example, familial colorectal cancer, hereditary nonpolyposis colorectal cancer, gastrointestinal stromal tumor, etc.), rectal cancer (for example, gastrointestinal stromal tumor, etc.), small intestine cancer (for example, non-Hodgkin's lymphoma, gastrointestinal stromal tumor, etc.), small intestine cancer (for example, non-Hodgkin's lymphoma, gastrointestinal stromal tumor, etc.), esophageal cancer, duodenal cancer, tongue cancer, pharyngeal cancer (for example, nasopharyngeal cancer, oropharyngeal cancer, hypopharyngeal cancer, etc.), head and neck cancer, salivary gland cancer, brain tumor (for example, pineal gland stellate cell tumor, pilocytic astrocytoma, diffuse astrocytoma, anaplestic astrocytoma, etc.), schwannoma, liver cancer (for example, primary liver cancer, extrahepatic bile duct cancer, etc.), kidney cancer (for example, renal cell carcinoma, transitional epithelial carcinoma of the renal pelvis and ureter, etc.), gall bladder cancer, bile duct cancer, pancreatic cancer, liver cancer, endometrial cancer, cervical cancer, ovarian cancer (for example, epithelial ovarian cancer, extragonadal germ cell tumor, ovarian germ cell tumor, ovarian low grade tumor, etc.), bladder cancer, urethral cancer, skin cancer (for example, intraocular (eye) melanoma, Merkel cell cancer, etc.), hemangioma, malignant lymphoma (for example, reticulosarcoma, lymphosarcoma, Hodgkin's disease, etc.), melanoma (malignant melanoma), thyroid cancer (for example, medullary thyroid cancer, etc.), parathyroid cancer, nasal cancer, paranasal sinus cancer, bone tumor (for example, osteosarcoma, Ewing's tumor, uterine sarcoma, soft tissue sarcoma, etc.), metastatic medulloblastoma, angiofibroma, dermatofibrosarcoma protuberans, retinosarcoma, penis cancer, testicular tumor, pediatric solid tumor (for example, Wilms tumor, pediatric renal tumor, etc.), Kaposi's sarcoma, Kaposi's sarcoma caused by AIDS, maxillary sinus neoplasm, fibrous histiocytoma, leiomyosarcoma, rhabdomyosarcoma, chronic myeloproliferative disease, and leukemia (for example, acute myelogenous leukemia, acute lymphoblastic leukemia, etc.) may be exemplified and the target cancer is not limited thereto.
It has been reported that there is a specific gene expression/mutation pattern according to a cancer type including the cancer gene and cancer inhibiting gene described above. Therefore, when a biochip of the present embodiment is prepared on the basis of a gene expression profile for each cancer type and the like, it is possible to increase the accuracy of diagnosis.
In addition, when the biochip of the present embodiment is used, it is possible to predict the susceptibility/resistance of an anti-cancer agent. For example, it has been reported that, in the case of gefinitib which is an EGFR inhibitor, when EGFR in a test sample has an L858R mutation or G719X mutation, the mutation exhibits gefinitib susceptibility.
On the other hand, it has been reported that, when EGFR in a test sample has a T790M mutation and/or D761Y mutation, the mutation exhibits gefitinib resistance. In addition, it has been reported that these mutations exhibiting gefitinib resistance detected at a higher frequency as a stage of disease progresses. In the biochip of the present embodiment, since it is possible to easily quantify an EGRF gene exhibiting a resistance mutation, according to the biochip of the present embodiment, it is possible to check a degree of progress of cancer.
Influenza Virus Detection Biochip
In addition, in the biochip of the present embodiment, as the first affinity substance provided on the protective film, a nucleic acid complementary to a nucleic acid derived from influenza virus or a carbohydrate chain to which influenza virus specifically binds may be exemplified. That is, the biochip of the present embodiment may be a biochip for detecting influenza virus.
As the biochip of the present embodiment, for example, in A type, B type, and C type genomes, a nucleic acid that recognizes a certain mutation site including a reported mutation and is fixed to a protective film may be exemplified. In addition, as the first affinity substance, an antibody that can specifically recognize A type, B type and C type viruses may be used. In addition, it is known that influenza virus binds to a sialic acid residue when a cell is infected therewith, and since binding modes of a sialic acid to which virus can bind and a sugar differ according to a type of virus, as the first affinity substance, a sialic acid-containing carbohydrate chain to which A type, B type and C type viruses bind may be used.
Here, in this specification, “sialic acid” generally refers to a substance in which an amino group or a hydroxy group of a nine-carbon sugar neuraminic acid is substituted. For example, N-acetylneuraminic acid (Neu5Ac) acetylated in position 5 and N-glycolylneuraminic acid (Neu5Gc) modified with a glycolic acid may be exemplified.
According to the biochip of the present embodiment, it is possible to detect infection of influenza virus at an early stage.
In addition, when the biochip of the present embodiment is used over time, it is possible to perform follow-up observation of a disease state after viral infection.
According to the above embodiment, a measurement error due to magnetic beads present both on thin lines and between thin lines of the magnetoresistance effect element having a meander structure is avoided, and it is possible to detect biomolecules in a sample with high accuracy. In addition, when the biosensor of the present embodiment is used as a biochip, it is possible to perform diagnosis easily and rapidly, and it can be applied for, for example, cancer diagnosis, diagnosis for a specific type of cancer, diagnosis of a degree to which cancer has progressed, detection of influenza virus, identification of a type of influenza virus, and observation of a state of an influenza disease.
| Number | Date | Country | Kind |
|---|---|---|---|
| 2016-063490 | Mar 2016 | JP | national |
| 2016-104468 | May 2016 | JP | national |
| 2016-144124 | Jul 2016 | JP | national |
| 2016-144125 | Jul 2016 | JP | national |
| 2016-144357 | Jul 2016 | JP | national |
| Filing Document | Filing Date | Country | Kind |
|---|---|---|---|
| PCT/JP2017/012043 | 3/24/2017 | WO | 00 |
