CANCER BIOMARKERS AND CLASSIFIERS AND USES THEREOF

Information

  • Patent Application
  • 20160258026
  • Publication Number
    20160258026
  • Date Filed
    November 04, 2014
    10 years ago
  • Date Published
    September 08, 2016
    8 years ago
Abstract
The present invention relates to methods, systems and kits for the diagnosis, prognosis and the determination of cancer progression of cancer in a subject. The invention also provides methods, systems and kits for determining the treatment modality of a cancer in a subject. The methods, systems and kits comprise expression-based analysis of biomarkers. Further disclosed herein, certain instances, are probe sets for use in assessing a cancer status in a subject. Further disclosed herein are classifiers for analyzing a cancer, such as, for example, bladder cancer.
Description
FIELD OF THE INVENTION

The present invention relates to methods, systems and kits for the diagnosis, prognosis and the determination of cancer progression of cancer in a subject. The invention also provides methods, systems and kits for determining the treatment modality of a cancer in a subject. The methods, systems and kits comprise expression-based analysis of biomarkers. Further disclosed herein, in certain instances, are probe sets for use in assessing a cancer status in a subject. Further disclosed herein are classifiers for analyzing a cancer, such as, for example, bladder cancer.


BACKGROUND OF THE INVENTION

Cancer is the uncontrolled growth of abnormal cells anywhere in a body. The abnormal cells are termed cancer cells, malignant cells, or tumor cells. Many cancers and


the abnormal cells that compose the cancer tissue are further identified by the name of the tissue that the abnormal cells originated from (for example, bladder cancer, breast cancer, lung cancer, colon cancer, prostate cancer, pancreatic cancer, thyroid cancer). Cancer cells can proliferate uncontrollably and form a mass of cancer cells. Cancer cells can break away from this original mass of cells, travel through the blood and lymph systems, and lodge in other organs where they can again repeat the uncontrolled growth cycle. This process of cancer cells leaving an area and growing in another body area is often termed metastatic spread or metastatic disease. For example, if breast cancer cells spread to a bone (or anywhere else), it can mean that the individual has metastatic breast cancer.


Standard clinical parameters such as tumor size, grade, lymph node involvement and tumor-node-metastasis (TNM) staging (American Joint Committee on Cancer http://www.cancerstaging.org) may correlate with outcome and serve to stratify patients with respect to (neo)adjuvant chemotherapy, immunotherapy, antibody therapy and/or radiotherapy regimens. Incorporation of molecular markers in clinical practice may define tumor subtypes that are more likely to respond to targeted therapy. However, stage-matched tumors grouped by histological or molecular subtypes may respond differently to the same treatment regimen. Additional key genetic and epigenetic alterations may exist with important etiological contributions. A more detailed understanding of the molecular mechanisms and regulatory pathways at work in cancer cells and the tumor microenvironment (TME) could dramatically improve the design of novel anti-tumor drugs and inform the selection of optimal therapeutic strategies. The development and implementation of diagnostic, prognostic and therapeutic biomarkers to characterize the biology of each tumor may assist clinicians in making important decisions with regard to individual patient care and treatment. Thus, provided herein are methods, compositions and systems for the analysis of coding and non-coding targets for the diagnosis, prognosis, and monitoring of a cancer.


This background information is provided for the purpose of making known information believed by the applicant to be of possible relevance to the present invention. No admission is necessarily intended, nor should be construed, that any of the preceding information constitutes prior art against the present invention.


SUMMARY OF THE INVENTION

The present invention relates to methods, systems and kits for the diagnosis, prognosis and determination of cancer progression of cancer in a subject. In some embodiments, the present invention provides a method of diagnosing, prognosing, determining the progression of cancer, predicting a therapeutic regimen or predicting benefit from therapy in a subject, comprising (a) assaying an expression level in a sample from the subject for a plurality of targets, wherein the plurality of targets comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; and (b) diagnosing, prognosing, determining the progression of cancer, predicting a therapeutic regimen or predicting benefit from therapy in the subject based on the expression levels of the plurality of targets. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the cancer is a bladder cancer. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the cancer is a prostate cancer. In some embodiments, the cancer is a pancreatic cancer. In some embodiments, the cancer is a thyroid cancer. In some embodiments, the plurality of targets comprises a coding target. In some embodiments, the coding target is an exonic sequence. In some embodiments, the plurality of targets comprises a non-coding target. In some embodiments, the non-coding target comprises an intronic sequence or partially overlaps an intronic sequence. In some embodiments, the non-coding target comprises a sequence within the UTR or partially overlaps with a UTR sequence. In some embodiments, the target comprises a nucleic acid sequence. In some embodiments, the nucleic acid sequence is a DNA sequence. In some embodiments, the nucleic acid sequence is an RNA sequence. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs: 1-1440. In some embodiments, the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs: 1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 2B, Table 16 or SEQ ID NOs: 1-1440 or SEQ ID NOs: 1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs: 1-1440. In some embodiments, the plurality of targets comprises at least 30 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 35 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 40 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 50 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 60 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 100 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 125 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 150 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 175 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 200 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 225 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 250 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 275 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 300 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 350 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 400 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 450 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 500 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 550 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 600 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 650 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 700 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 750 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 800 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises SEQ ID NOs:1-15. In some embodiments, the diagnosing, prognosing, determining progression of cancer, predicting a therapeutic regimen or predicting benefit from therapy includes determining the malignancy of the cancer. In some embodiments, the diagnosing, prognosing, determining progression of cancer, predicting a therapeutic regimen or predicting benefit from therapy includes determining the stage of the cancer. In some embodiments, the diagnosing, prognosing, determining progression of cancer, predicting a therapeutic regimen or predicting benefit from therapy includes assessing the risk of cancer recurrence. In some embodiments, determining the treatment for the cancer includes determining the efficacy of treatment. In some embodiments, the method further comprises sequencing the plurality of targets. In some embodiments, the method further comprises hybridizing the plurality of targets to a solid support. In some embodiments, the solid support is a bead or array. In some embodiments, assaying the expression level of a plurality of targets may comprise the use of a probe set. In some embodiments, assaying the expression level may comprise the use of a classifier. The classifier may comprise a probe selection region (PSR). In some embodiments, the classifier may comprise the use of an algorithm. The algorithm may comprise a machine learning algorithm. In some embodiments, assaying the expression level may also comprise sequencing the plurality of targets.


Further disclosed herein in some embodiments is a probe set for assessing a cancer status of a subject comprising a plurality of probes, wherein the probes in the set are capable of detecting an expression level of one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440, wherein the expression level determines the cancer status of the subject with at least 40% specificity. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 30 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 35 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 40 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 50 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 60 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 100 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 125 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 150 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 175 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 200 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 225 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 250 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 275 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 300 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 350 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 400 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 450 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 500 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 550 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 600 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 650 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 700 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 750 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 800 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises SEQ ID NOs:1-15. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the cancer is a bladder cancer. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the cancer is a prostate cancer. In some embodiments, the cancer is a pancreatic cancer. In some embodiments, the cancer is a thyroid cancer. In some embodiments, the probe set further comprises a probe capable of detecting an expression level of at least one coding target. In some embodiments, the coding target is an exonic sequence. In some embodiments, the probe set further comprises a probe capable of detecting an expression level of at least one non-coding target. In some embodiments, the non-coding target is an intronic sequence or partially overlaps with an intronic sequence. In some embodiments, the non-coding target is a UTR sequence or partially overlaps with a UTR sequence. In some embodiments, assessing the cancer status includes assessing cancer recurrence risk. In some embodiments, assessing the cancer status includes determining a treatment modality. In some embodiments, assessing the cancer status includes determining the efficacy of treatment. In some embodiments, the target is a nucleic acid sequence. In some embodiments, the nucleic acid sequence is a DNA sequence. In some embodiments, the nucleic acid sequence is an RNA sequence. In some embodiments, the probes are between about 15 nucleotides and about 500 nucleotides in length. In some embodiments, the probes are between about 15 nucleotides and about 450 nucleotides in length. In some embodiments, the probes are between about 15 nucleotides and about 400 nucleotides in length. In some embodiments, the probes are between about 15 nucleotides and about 350 nucleotides in length. In some embodiments, the probes are between about 15 nucleotides and about 300 nucleotides in length. In some embodiments, the probes are between about 15 nucleotides and about 250 nucleotides in length. In some embodiments, the probes are between about 15 nucleotides and about 200 nucleotides in length. In some embodiments, the probes are at least 15 nucleotides in length. In some embodiments, the probes are at least 25 nucleotides in length. In some embodiments, the expression level determines the cancer status of the subject with at least 50% specificity. In some embodiments, the expression level determines the cancer status of the subject with at least 60% specificity. In some embodiments, the expression level determines the cancer status of the subject with at least 65% specificity. In some embodiments, the expression level determines the cancer status of the subject with at least 70% specificity. In some embodiments, the expression level determines the cancer status of the subject with at least 75% specificity. In some embodiments, the expression level determines the cancer status of the subject with at least 80% specificity. In some embodiments, the expression level determines the cancer status of the subject with at least 85% specificity. In some embodiments, the non-coding target is a non-coding RNA transcript and the non-coding RNA transcript is non-polyadenylated.


Further disclosed herein in some embodiments is a system for analyzing a cancer, comprising: (a) a probe set comprising a plurality of target sequences, wherein (i) the plurality of target sequences hybridizes to one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; or (ii) the plurality of target sequences comprises one or more target sequences selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; and (b) a computer model or algorithm for analyzing an expression level and/or expression profile of the target hybridized to the probe in a sample from a subject suffering from a cancer. In some embodiments, the system further comprises an electronic memory for capturing and storing an expression profile. In some embodiments, the system further comprises a computer-processing device, optionally connected to a computer network. In some embodiments, the system further comprises a software module executed by the computer-processing device to analyze an expression profile. In some embodiments, the system further comprises a software module executed by the computer-processing device to compare the expression profile to a standard or control. In some embodiments, the system further comprises a software module executed by the computer-processing device to determine the expression level of the target. In some embodiments, the system further comprises a machine to isolate the target or the probe from the sample. In some embodiments, the system further comprises a machine to sequence the target or the probe. In some embodiments, the system further comprises a machine to amplify the target or the probe. In some embodiments, the system further comprises a label that specifically binds to the target, the probe, or a combination thereof. In some embodiments, the system further comprises a software module executed by the computer-processing device to transmit an analysis of the expression profile to the individual or a medical professional treating the individual. In some embodiments, the system further comprises a software module executed by the computer-processing device to transmit a diagnosis or prognosis to the individual or a medical professional treating the individual. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 30 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 35 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 40 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 50 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 60 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 100 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 125 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 150 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 175 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 200 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 225 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 250 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 275 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 300 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 350 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 400 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 450 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 500 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 550 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 600 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 650 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 700 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 750 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 800 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises SEQ ID NOs:1-15. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the cancer is a bladder cancer. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the system further comprises a sequence for sequencing the plurality of targets. In some embodiments, the system further comprises an instrument for amplifying the plurality of targets. In some embodiments, the system further comprises a label for labeling the plurality of targets.


Further disclosed herein in some embodiments is a method of analyzing a cancer in an individual in need thereof, comprising: (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; and (b) comparing the expression profile from the sample to an expression profile of a control or standard. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 30 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 35 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 40 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 50 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 60 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 100 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 125 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 150 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 175 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 200 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 225 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 250 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 275 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 300 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 350 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 400 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 450 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 500 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 550 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 600 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 650 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 700 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 750 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 800 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises SEQ ID NOs:1-15. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the cancer is a prostate cancer. In some embodiments, the cancer is a pancreatic cancer. In some embodiments, the cancer is a breast cancer. In some embodiments, the cancer is a thyroid cancer. In some embodiments, the cancer is a lung cancer. In some embodiments, the method further comprises a software module executed by a computer-processing device to compare the expression profiles. In some embodiments, the method further comprises providing diagnostic or prognostic information to the individual about the cardiovascular disorder based on the comparison. In some embodiments, the method further comprises diagnosing the individual with a cancer if the expression profile of the sample (a) deviates from the control or standard from a healthy individual or population of healthy individuals, or (b) matches the control or standard from an individual or population of individuals who have or have had the cancer. In some embodiments, the method further comprises predicting the susceptibility of the individual for developing a cancer based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the method further comprises prescribing a treatment regimen based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the method further comprises altering a treatment regimen prescribed or administered to the individual based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the method further comprises predicting the individual's response to a treatment regimen based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the deviation is the expression level of one or more targets from the sample is greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the method further comprises using a machine to isolate the target or the probe from the sample. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the method further comprises amplifying the target, the probe, or any combination thereof. In some embodiments, the method further comprises sequencing the target, the probe, or any combination thereof. In some embodiments, the method further comprises quantifying the expression level of the plurality of targets. In some embodiments, the method further comprises labeling the plurality of targets. In some embodiments, assaying the expression level of a plurality of targets may comprise the use of a probe set. In some embodiments, obtaining the expression level may comprise the use of a classifier. The classifier may comprise a probe selection region (PSR). In some embodiments, the classifier may comprise the use of an algorithm. The algorithm may comprise a machine learning algorithm. In some embodiments, obtaining the expression level may also comprise sequencing the plurality of targets.


Disclosed herein in some embodiments is a method of diagnosing cancer in an individual in need thereof, comprising (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; (b) comparing the expression profile from the sample to an expression profile of a control or standard; and (c) diagnosing a cancer in the individual if the expression profile of the sample (i) deviates from the control or standard from a healthy individual or population of healthy individuals, or (ii) matches the control or standard from an individual or population of individuals who have or have had the cancer. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 30 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 35 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 40 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 50 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 60 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 100 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 125 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 150 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 175 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 200 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 225 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 250 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 275 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 300 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 350 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 400 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 450 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 500 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 550 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 600 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 650 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 700 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 750 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 800 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises SEQ ID NOs:1-15. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the cancer is a prostate cancer. In some embodiments, the cancer is a pancreatic cancer. In some embodiments, the cancer is a breast cancer. In some embodiments, the cancer is a thyroid cancer. In some embodiments, the cancer is a lung cancer. In some embodiments, the method further comprises a software module executed by a computer-processing device to compare the expression profiles. In some embodiments, the deviation is the expression level of one or more targets from the sample is greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the method further comprises using a machine to isolate the target or the probe from the sample. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the method further comprises amplifying the target, the probe, or any combination thereof. In some embodiments, the method further comprises sequencing the target, the probe, or any combination thereof. In some embodiments, the method further comprises quantifying the expression level of the plurality of targets. In some embodiments, the method further comprises labeling the plurality of targets. In some embodiments, obtaining the expression level may comprise the use of a classifier. The classifier may comprise a probe selection region (PSR). In some embodiments, the classifier may comprise the use of an algorithm. The algorithm may comprise a machine learning algorithm. In some embodiments, obtaining the expression level may also comprise sequencing the plurality of targets.


Further disclosed herein in some embodiments is a method of predicting whether an individual is susceptible to developing a cancer, comprising (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; (b) comparing the expression profile from the sample to an expression profile of a control or standard; and (c) predicting the susceptibility of the individual for developing a cancer based on (i) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (ii) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 30 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 35 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 40 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 50 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 60 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 100 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 125 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 150 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 175 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 200 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 225 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 250 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 275 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 300 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 350 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 400 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 450 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 500 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 550 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 600 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 650 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 700 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 750 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 800 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises SEQ ID NOs:1-15. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the cancer is a prostate cancer. In some embodiments, the cancer is a pancreatic cancer. In some embodiments, the cancer is a breast cancer. In some embodiments, the cancer is a thyroid cancer. In some embodiments, the cancer is a lung cancer. In some embodiments, the method further comprises a software module executed by a computer-processing device to compare the expression profiles. In some embodiments, the deviation is the expression level of one or more targets from the sample is greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the method further comprises using a machine to isolate the target or the probe from the sample. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the method further comprises amplifying the target, the probe, or any combination thereof. In some embodiments, the method further comprises sequencing the target, the probe, or any combination thereof. In some embodiments, obtaining the expression level may comprise the use of a classifier. The classifier may comprise a probe selection region (PSR). In some embodiments, the classifier may comprise the use of an algorithm. The algorithm may comprise a machine learning algorithm. In some embodiments, obtaining the expression level may also comprise sequencing the plurality of targets. In some embodiments, obtaining the expression level may also comprise amplifying the plurality of targets. In some embodiments, obtaining the expression level may also comprise quantifying the plurality of targets.


Further disclosed herein in some embodiments is a method of predicting an individual's response to a treatment regimen for a cancer, comprising (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; (b) comparing the expression profile from the sample to an expression profile of a control or standard; and (c) predicting the individual's response to a treatment regimen based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 30 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 35 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 40 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 50 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 60 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 100 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 125 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 150 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 175 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 200 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 225 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 250 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 275 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 300 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 350 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 400 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 450 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 500 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 550 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 600 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 650 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 700 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 750 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 800 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises SEQ ID NOs:1-15. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the cancer is a prostate cancer. In some embodiments, the cancer is a pancreatic cancer. In some embodiments, the cancer is a breast cancer. In some embodiments, the cancer is a thyroid cancer. In some embodiments, the cancer is a lung cancer. In some embodiments, the method further comprises a software module executed by a computer-processing device to compare the expression profiles. In some embodiments, the deviation is the expression level of one or more targets from the sample is greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the method further comprises using a machine to isolate the target or the probe from the sample. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the method further comprises amplifying the target, the probe, or any combination thereof. In some embodiments, the method further comprises sequencing the target, the probe, or any combination thereof. In some embodiments, the method further comprises quantifying the target, the probe, or any combination thereof. In some embodiments, the method further comprises labeling the target, the probe, or any combination thereof. In some embodiments, obtaining the expression level may comprise the use of a classifier. The classifier may comprise a probe selection region (PSR). In some embodiments, the classifier may comprise the use of an algorithm. The algorithm may comprise a machine learning algorithm. In some embodiments, obtaining the expression level may also comprise sequencing the plurality of targets. In some embodiments, obtaining the expression level may also comprise amplifying the plurality of targets. In some embodiments, obtaining the expression level may also comprise quantifying the plurality of targets.


Disclosed herein in some embodiments is a method of prescribing a treatment regimen for a cancer to an individual in need thereof, comprising (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; (b) comparing the expression profile from the sample to an expression profile of a control or standard; and (c) prescribing a treatment regimen based on (i) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (ii) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 30 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 35 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 40 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 50 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 60 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 100 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 125 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 150 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 175 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 200 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 225 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 250 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 275 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 300 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 350 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 400 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 450 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 500 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 550 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 600 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 650 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 700 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 750 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 800 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises SEQ ID NOs:1-15. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the cancer is a prostate cancer. In some embodiments, the cancer is a pancreatic cancer. In some embodiments, the cancer is a breast cancer. In some embodiments, the cancer is a thyroid cancer. In some embodiments, the cancer is a lung cancer. In some embodiments, the method further comprises a software module executed by a computer-processing device to compare the expression profiles. In some embodiments, the deviation is the expression level of one or more targets from the sample is greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the method further comprises using a machine to isolate the target or the probe from the sample. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the method further comprises amplifying the target, the probe, or any combination thereof. In some embodiments, the method further comprises sequencing the target, the probe, or any combination thereof. In some embodiments, the method further comprises converting the expression levels of the target sequences into a likelihood score that indicates the probability that a biological sample is from a patient who will exhibit no evidence of disease, who will exhibit systemic cancer, or who will exhibit biochemical recurrence. In some embodiments, the method further comprises quantifying the expression level of the plurality of targets. In some embodiments, the method further comprises labeling the plurality of targets. In some embodiments, the target sequences are differentially expressed the cancer. In some embodiments, the differential expression is dependent on aggressiveness. In some embodiments, the expression profile is determined by a method selected from the group consisting of RT-PCR, Northern blotting, ligase chain reaction, array hybridization, and a combination thereof. In some embodiments, obtaining the expression level may comprise the use of a classifier. The classifier may comprise a probe selection region (PSR). In some embodiments, the classifier may comprise the use of an algorithm. The algorithm may comprise a machine learning algorithm. In some embodiments, obtaining the expression level may also comprise sequencing the plurality of targets. In some embodiments, obtaining the expression level may also comprise amplifying the plurality of targets. In some embodiments, obtaining the expression level may also comprise quantifying the plurality of targets.


In other embodiments, the present invention provides a method of determining the risk of bladder cancer recurrence in a subject having bladder cancer, comprising: measuring the expression level, in a bladder tissue or cell sample isolated from a subject, for at least one marker selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; wherein an elevated or reduced expression level of the at least one marker, over a control expression level in a corresponding normal bladder cancer tissue or bladder cancer cell sample, is indicative of an increased risk of bladder cancer recurrence. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer.


Further disclosed herein is a classifier for analyzing a cancer, wherein the classifier has an AUC value of at least about 0.60. The AUC of the classifier may be at least about 0.60, 0.61, 0.62, 0.63, 0.64, 0.65, 0.66, 0.67, 0.68, 0.69, 0.70 or more. The AUC of the classifier may be at least about 0.71, 0.72, 0.73, 0.74, 0.75, 0.76, 0.77, 0.78, 0.79, 0.80 or more. The AUC of the classifier may be at least about 0.81, 0.82, 0.83, 0.84, 0.85, 0.86, 0.87, 0.88, 0.89, 0.90 or more. The AUC of the classifier may be at least about 0.91, 0.92, 0.93, 0.94, 0.95, 0.96, 0.97, 0.98, 0.99 or more. The 95% CI of a classifier or biomarker may be between about 1.10 to 1.70. In some instances, the difference in the range of the 95% CI for a biomarker or classifier is between about 0.25 to about 0.50, between about 0.27 to about 0.47, or between about 0.30 to about 0.45.


Further disclosed herein is a classifier for analyzing a cancer, wherein the classifier has an AUC value of at least about 0.60. The AUC of the classifier may be at least about 0.60, 0.61, 0.62, 0.63, 0.64, 0.65, 0.66, 0.67, 0.68, 0.69, 0.70 or more. The AUC of the classifier may be at least about 0.71, 0.72, 0.73, 0.74, 0.75, 0.76, 0.77, 0.78, 0.79, 0.80 or more. The AUC of the classifier may be at least about 0.81, 0.82, 0.83, 0.84, 0.85, 0.86, 0.87, 0.88, 0.89, 0.90 or more. The AUC of the classifier may be at least about 0.91, 0.92, 0.93, 0.94, 0.95, 0.96, 0.97, 0.98, 0.99 or more. The 95% CI of a classifier or biomarker may be between about 1.10 to 1.70. In some instances, the difference in the range of the 95% CI for a biomarker or classifier is between about 0.25 to about 0.50, between about 0.27 to about 0.47, or between about 0.30 to about 0.45.


Further disclosed herein is a method for analyzing a cancer, comprising use of one or more classifiers, wherein the significance of the one or more classifiers is based on one or more metrics selected from the group comprising T-test, P-value, KS (Kolmogorov Smimov) P-value, accuracy, accuracy P-value, positive predictive value (PPV), negative predictive value (NPV), sensitivity, specificity, AUC, AUC P-value (Auc.pvalue), Wilcoxon Test P-value, Median Fold Difference (MFD), Kaplan Meier (KM) curves, survival AUC (survAUC), Kaplan Meier P-value (KM P-value), Univariable Analysis Odds Ratio P-value (uvaORPval), multivariable analysis Odds Ratio P-value (mvaORPval), Univariable Analysis Hazard Ratio P-value (uvaHRPval) and Multivariable Analysis Hazard Ratio P-value (mvaHRPval). The significance of the one or more classifiers may be based on two or more metrics selected from the group comprising AUC, AUC P-value (Auc.pvalue), Wilcoxon Test P-value, Median Fold Difference (MFD), Kaplan Meier (KM) curves, survival AUC (survAUC), Univariable Analysis Odds Ratio P-value (uvaORPval), multivariable analysis Odds Ratio P-value (mvaORPval), Kaplan Meier P-value (KM P-value), Univariable Analysis Hazard Ratio P-value (uvaHRPval) and Multivariable Analysis Hazard Ratio P-value (mvaHRPval). The significance of the one or more classifiers may be based on three or more metrics selected from the group comprising AUC, AUC P-value (Auc.pvalue), Wilcoxon Test P-value, Median Fold Difference (MFD), Kaplan Meier (KM) curves, survival AUC (survAUC), Kaplan Meier P-value (KM P-value), Univariable Analysis Odds Ratio P-value (uvaORPval), multivariable analysis Odds Ratio P-value (mvaORPval), Univariable Analysis Hazard Ratio P-value (uvaHRPval) and Multivariable Analysis Hazard Ratio P-value (mvaHRPval).


The one or more metrics may comprise AUC. The one or more metrics may comprise AUC and AUC P-value. The one or more metrics may comprise AUC P-value and Wilcoxon Test P-value. The one or more metrics may comprise Wilcoxon Test P-value. The one or more metrics may comprise AUC and Univariable Analysis Odds Ratio P-value (uvaORPval). The one or more metrics may comprise multivariable analysis Odds Ratio P-value (mvaORPval) and Multivariable Analysis Hazard Ratio P-value (mvaHRPval). The one or more metrics may comprise AUC and Multivariable Analysis Hazard Ratio P-value (mvaHRPval). The one or more metrics may comprise Wilcoxon Test P-value and Multivariable Analysis Hazard Ratio P-value (mvaHRPval).


The clinical significance of the classifier may be based on the AUC value. The AUC of the classifier may be at least about about 0.60, 0.61, 0.62, 0.63, 0.64, 0.65, 0.66, 0.67, 0.68, 0.69, 0.70 or more. The AUC of the classifier may be at least about 0.71, 0.72, 0.73, 0.74, 0.75, 0.76, 0.77, 0.78, 0.79, 0.80 or more. The AUC of the classifier may be at least about 0.81, 0.82, 0.83, 0.84, 0.85, 0.86, 0.87, 0.88, 0.89, 0.90 or more. The AUC of the classifier may be at least about 0.91, 0.92, 0.93, 0.94, 0.95, 0.96, 0.97, 0.98, 0.99 or more. The 95% CI of a classifier or biomarker may be between about 1.10 to 1.70. In some instances, the difference in the range of the 95% CI for a biomarker or classifier is between about 0.25 to about 0.50, between about 0.27 to about 0.47, or between about 0.30 to about 0.45.


The clinical significance of the classifier may be based on Univariable Analysis Odds Ratio P-value (uvaORPval). The Univariable Analysis Odds Ratio P-value (uvaORPval) of the classifier may be between about 0-0.4. The Univariable Analysis Odds Ratio P-value (uvaORPval) of the classifier may be between about 0-0.3. The Univariable Analysis Odds Ratio P-value (uvaORPval) of the classifier may be between about 0-0.2. The Univariable Analysis Odds Ratio P-value (uvaORPval) of the classifier may be less than or equal to 0.25, 0.22, 0.21, 0.20, 0.19, 0.18, 0.17, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11. The Univariable Analysis Odds Ratio P-value (uvaORPval) of the classifier may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The Univariable Analysis Odds Ratio P-value (uvaORPval) of the classifier may be less than or equal to 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The clinical significance of the classifier may be based on multivariable analysis Odds Ratio P-value (mvaORPval). The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier may be between about 0-1. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier may be between about 0-0.9. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier may be between about 0-0.8. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier may be less than or equal to 0.90, 0.88, 0.86, 0.84, 0.82, 0.80. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier may be less than or equal to 0.78, 0.76, 0.74, 0.72, 0.70, 0.68, 0.66, 0.64, 0.62, 0.60, 0.58, 0.56, 0.54, 0.52, 0.50. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier may be less than or equal to 0.48, 0.46, 0.44, 0.42, 0.40, 0.38, 0.36, 0.34, 0.32, 0.30, 0.28, 0.26, 0.25, 0.22, 0.21, 0.20, 0.19, 0.18, 0.17, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier may be less than or equal to 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The clinical significance of the classifier may be based on the Kaplan Meier P-value (KM P-value). The Kaplan Meier P-value (KM P-value) of the classifier may be between about 0-0.8. The Kaplan Meier P-value (KM P-value) of the classifier may be between about 0-0.7. The Kaplan Meier P-value (KM P-value) of the classifier may be less than or equal to 0.80, 0.78, 0.76, 0.74, 0.72, 0.70, 0.68, 0.66, 0.64, 0.62, 0.60, 0.58, 0.56, 0.54, 0.52, 0.50. The Kaplan Meier P-value (KM P-value) of the classifier may be less than or equal to 0.48, 0.46, 0.44, 0.42, 0.40, 0.38, 0.36, 0.34, 0.32, 0.30, 0.28, 0.26, 0.25, 0.22, 0.21, 0.20, 0.19, 0.18, 0.17, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11. The Kaplan Meier P-value (KM P-value) of the classifier may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The Kaplan Meier P-value (KM P-value) of the classifier may be less than or equal to 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The clinical significance of the classifier may be based on the survival AUC value (survAUC). The survival AUC value (survAUC) of the classifier may be between about 0-1. The survival AUC value (survAUC) of the classifier may be between about 0-0.9. The survival AUC value (survAUC) of the classifier may be less than or equal to 1, 0.98, 0.96, 0.94, 0.92, 0.90, 0.88, 0.86, 0.84, 0.82, 0.80. The survival AUC value (survAUC) of the classifier may be less than or equal to 0.80, 0.78, 0.76, 0.74, 0.72, 0.70, 0.68, 0.66, 0.64, 0.62, 0.60, 0.58, 0.56, 0.54, 0.52, 0.50. The survival AUC value (survAUC) of the classifier may be less than or equal to 0.48, 0.46, 0.44, 0.42, 0.40, 0.38, 0.36, 0.34, 0.32, 0.30, 0.28, 0.26, 0.25, 0.22, 0.21, 0.20, 0.19, 0.18, 0.17, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11. The survival AUC value (survAUC) of the classifier may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The survival AUC value (survAUC) of the classifier may be less than or equal to 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The clinical significance of the classifier may be based on the Univariable Analysis Hazard Ratio P-value (uvaHRPval). The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier may be between about 0-0.4. The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier may be between about 0-0.3. The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier may be less than or equal to 0.40, 0.38, 0.36, 0.34, 0.32. The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier may be less than or equal to 0.30, 0.29, 0.28, 0.27, 0.26, 0.25, 0.24, 0.23, 0.22, 0.21, 0.20. The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier may be less than or equal to 0.19, 0.18, 0.17, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11. The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier may be less than or equal to 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The clinical significance of the classifier may be based on the Multivariable Analysis Hazard Ratio P-value (mvaHRPval). The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier may be between about 0-1. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier may be between about 0-0.9. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier may be less than or equal to 1, 0.98, 0.96, 0.94, 0.92, 0.90, 0.88, 0.86, 0.84, 0.82, 0.80. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier may be less than or equal to 0.80, 0.78, 0.76, 0.74, 0.72, 0.70, 0.68, 0.66, 0.64, 0.62, 0.60, 0.58, 0.56, 0.54, 0.52, 0.50. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier may be less than or equal to 0.48, 0.46, 0.44, 0.42, 0.40, 0.38, 0.36, 0.34, 0.32, 0.30, 0.28, 0.26, 0.25, 0.22, 0.21, 0.20, 0.19, 0.18, 0.17, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier may be less than or equal to 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The clinical significance of the classifier may be based on the Multivariable Analysis Hazard Ratio P-value (mvaHRPval). The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier may be between about 0 to about 0.60. significance of the classifier may be based on the Multivariable Analysis Hazard Ratio P-value (mvaHRPval). The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier may be between about 0 to about 0.50. significance of the classifier may be based on the Multivariable Analysis Hazard Ratio P-value (mvaHRPval). The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier may be less than or equal to 0.50, 0.47, 0.45, 0.43, 0.40, 0.38, 0.35, 0.33, 0.30, 0.28, 0.25, 0.22, 0.20, 0.18, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11, 0.10. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier may be less than or equal to 0.01, 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The method may further comprise determining an expression profile based on the one or more classifiers. The method may further comprise providing a sample from a subject. The subject may be a healthy subject. The subject may be suffering from a cancer or suspected of suffering from a cancer. The method may further comprise diagnosing a cancer in a subject based on the expression profile or classifier. The method may further comprise treating a cancer in a subject in need thereof based on the expression profile or classifier. The method may further comprise determining a treatment regimen for a cancer in a subject in need thereof based on the expression profile or classifier. The method may further comprise prognosing a cancer in a subject based on the expression profile or classifier.


Further disclosed herein is a kit for analyzing a cancer, comprising (a) a probe set comprising a plurality of target sequences, wherein the plurality of target sequences comprises at least one target sequence listed in Table 2B, Table 16 or SEQ ID NOs:1-1440; and (b) a computer model or algorithm for analyzing an expression level and/or expression profile of the target sequences in a sample. In some embodiments, the kit further comprises a computer model or algorithm for correlating the expression level or expression profile with disease state or outcome. In some embodiments, the kit further comprises a computer model or algorithm for designating a treatment modality for the individual. In some embodiments, the kit further comprises a computer model or algorithm for normalizing expression level or expression profile of the target sequences. In some embodiments, the kit further comprises a computer model or algorithm comprising a robust multichip average (RMA), frozen robust multichip average (fRMA), Single Channel Array Normalization (SCAN), ComBat (Combining Batches of gene expression), probe logarithmic intensity error estimation (PLIER), non-linear fit (NLFIT) quantile-based, nonlinear normalization, or a combination thereof. In some embodiments, the plurality of target sequences comprises at least 5 target sequences selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of target sequences comprises at least 10 target sequences selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of target sequences comprises at least 15 target sequences selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of target sequences comprises at least 20 target sequences selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of target sequences comprises at least 30 target sequences selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of target sequences comprises at least 35 target sequences selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 40 target sequences selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 50 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 60 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 100 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 125 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 150 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 175 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 200 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 225 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 250 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 275 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 300 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 350 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 400 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 450 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 500 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 550 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 600 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 650 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 700 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 750 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 800 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises SEQ ID NOs:1-15. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the cancer is a prostate cancer. In some embodiments, the cancer is a pancreatic cancer. In some embodiments, the cancer is a breast cancer. In some embodiments, the cancer is a thyroid cancer. In some embodiments, the cancer is a lung cancer.


Further disclosed herein is a kit for analyzing a cancer, comprising (a) a probe set comprising a plurality of target sequences, wherein the plurality of target sequences hybridizes to one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; and (b) a computer model or algorithm for analyzing an expression level and/or expression profile of the target sequences in a sample. In some embodiments, the kit further comprises a computer model or algorithm for correlating the expression level or expression profile with disease state or outcome. In some embodiments, the kit further comprises a computer model or algorithm for designating a treatment modality for the individual. In some embodiments, the kit further comprises a computer model or algorithm for normalizing expression level or expression profile of the target sequences. In some embodiments, the kit further comprises a computer model or algorithm comprising a robust multichip average (RMA), frozen robust multichip average (fRMA), Single Channel Array Normalization (SCAN), ComBat (Combining Batches of gene expression), probe logarithmic intensity error estimation (PLIER), non-linear fit (NLFIT) quantile-based, nonlinear normalization, or a combination thereof. In some embodiments, the targets comprise at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the targets comprise at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the targets comprise at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the targets comprise at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the targets comprise at least 30 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the targets comprise at least 35 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the targets comprise comprises at least 40 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 50 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 60 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 100 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 125 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 150 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 175 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 200 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 225 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 250 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 275 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 300 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 350 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 400 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 450 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 500 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 550 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 600 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 650 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 700 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 750 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 800 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises SEQ ID NOs:1-15. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the cancer is a prostate cancer. In some embodiments, the cancer is a pancreatic cancer. In some embodiments, the cancer is a breast cancer. In some embodiments, the cancer is a thyroid cancer. In some embodiments, the cancer is a lung cancer.


In other embodiments, the present invention provides methods for analyzing a sample from a subject comprising (a) assaying an expression level in a sample from the subject for a plurality of targets, wherein the plurality of targets comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; and (b) comparing the expression level of the plurality of targets in the sample to a control level of the plurality of targets in a control sample. In other embodiments, the methods of the present invention further comprise a computer model or algorithm for analyzing the plurality of targets in the sample.


INCORPORATION BY REFERENCE

All publications, patents, and patent applications mentioned in this specification are herein incorporated by reference in their entireties to the same extent as if each individual publication, patent, or patent application was specifically and individually indicated to be incorporated by reference.





BRIEF DESCRIPTION OF THE DRAWINGS


FIG. 1 shows AUC of receiver operating characteristics (ROC) of single clinical variables and classifiers in the discovery and validation set.



FIGS. 2A-C show survival ROC curves for various classifiers of the present invention. FIG. 2A shows survival ROC curves for GC and single clinical variables. FIG. 2B shows survival ROC curves for IBCNC compared to G-IBCNC. FIG. 2C shows survival ROC curves for CC compared to G-CC at 4 years in the validation set.



FIGS. 3A-B show decision curves of classifiers of the present invention. FIG. 3A shows IBCNC compared to G-IBCNC. FIG. 3B shows CC compared to G-CC in the validation set.



FIGS. 4A-E show discrimination plots in validation set. Classifier scores of cases and controls across IBCNC, CC, GC, G-IBCNC and G-CC models.



FIGS. 5A-B show survival AUC over time and Cumulative incidence plots of GC in LNI negative patients from the validation set.



FIG. 6 shows cumulative incidence plot comparing patients with high or low G-CC as determined by majority rule (cutoff=0.5) in the validation set.



FIGS. 7A-B show reclassification by G-IBCNC and G-CC compared to IBCNC.



FIG. 8 shows genomic classifier and tumor stage relation.



FIGS. 9A-B show GC scores discrimination in LNI negative or positive subsets compared to CC.



FIGS. 10A-B show cumulative incidence plots of (A) CC and (B) GC in LNI negative patients from the validation set.



FIG. 11 shows survival AUC performance of external signatures in comparison to GC at predicting recurrence at 4 years.



FIG. 12 shows GO terms associated with the 15 features in GC.





DETAILED DESCRIPTION OF THE INVENTION

The present invention discloses systems and methods for diagnosing, predicting, and/or monitoring the status or outcome of a cancer in a subject using expression-based analysis of a plurality of targets. Generally, the method comprises (a) optionally providing a sample from a subject; (b) assaying the expression level for a plurality of targets in the sample; and (c) diagnosing, predicting and/or monitoring the status or outcome of a cancer based on the expression level of the plurality of targets.


Assaying the expression level for a plurality of targets in the sample may comprise applying the sample to a microarray. In some instances, assaying the expression level may comprise the use of an algorithm. The algorithm may be used to produce a classifier. Alternatively, the classifier may comprise a probe selection region. In some instances, assaying the expression level for a plurality of targets comprises detecting and/or quantifying the plurality of targets. In some embodiments, assaying the expression level for a plurality of targets comprises sequencing the plurality of targets. In some embodiments, assaying the expression level for a plurality of targets comprises amplifying the plurality of targets. In some embodiments, assaying the expression level for a plurality of targets comprises quantifying the plurality of targets. In some embodiments, assaying the expression level for a plurality of targets comprises conducting a multiplexed reaction on the plurality of targets.


In some instances, the plurality of targets comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises at least about 2, at least about 3, at least about 4, at least about 5, at least about 6, at least about 7, at least about 8, at least about 9, or at least about 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In other instances, the plurality of targets comprises at least about 12, at least about 15, at least about 17, at least about 20, at least about 22, at least about 25, at least about 27, at least about 30, at least about 32, at least about 35, at least about 37, or at least about 40 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 50 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 60 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 100 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 125 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 150 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 175 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 200 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 225 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 250 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 275 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 300 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 350 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 400 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 450 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 500 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 550 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 600 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 650 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 700 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 750 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 800 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises SEQ ID NOs:1-15. In some instances, the plurality of targets comprises a coding target, non-coding target, or any combination thereof. In some instances, the coding target comprises an exonic sequence. In other instances, the non-coding target comprises a non-exonic or exonic sequence. In some instances, the non-exonic sequence comprises an untranslated region (e.g., UTR), intronic region, intergenic region, antisense, or any combination thereof. Alternatively, the plurality of targets comprises an anti-sense sequence. In other instances, the plurality of targets comprises a non-coding RNA transcript.


Further disclosed herein, is a probe set for diagnosing, predicting, and/or monitoring a cancer in a subject. In some instances, the probe set comprises a plurality of probes capable of detecting an expression level of one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440, wherein the expression level determines the cancer status of the subject with at least about 45% specificity. In some instances, detecting an expression level comprise detecting gene expression, protein expression, or any combination thereof. In some instances, the plurality of targets comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises at least about 2, at least about 3, at least about 4, at least about 5, at least about 6, at least about 7, at least about 8, at least about 9, or at least about 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In other instances, the plurality of targets comprises at least about 12, at least about 15, at least about 17, at least about 20, at least about 22, at least about 25, at least about 27, at least about 30, at least about 32, at least about 35, at least about 37, or at least about 40 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 50 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 60 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 100 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 125 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 150 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 175 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 200 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 225 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 250 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 275 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 300 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 350 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 400 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 450 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 500 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 550 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 600 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 650 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 700 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 750 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 800 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises SEQ ID NOs:I-15. In some instances, the plurality of targets comprises a coding target, non-coding target, or any combination thereof. In some instances, the coding target comprises an exonic sequence. In other instances, the non-coding target comprises a non-exonic or exonic sequence. In some instances, the non-exonic sequence comprises an untranslated region (e.g., UTR), intronic region, intergenic region, antisense or any combination thereof. Alternatively, the plurality of targets comprises an anti-sense sequence. In other instances, the plurality of targets comprises a non-coding RNA transcript.


Further disclosed herein are methods for characterizing a patient population. Generally, the method comprises: (a) providing a sample from a subject; (b) assaying the expression level for a plurality of targets in the sample; and (c) characterizing the subject based on the expression level of the plurality of targets. In some instances, the plurality of targets comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises at least about 2, at least about 3, at least about 4, at least about 5, at least about 6, at least about 7, at least about 8, at least about 9, or at least about 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In other instances, the plurality of targets comprises at least about 12, at least about 15, at least about 17, at least about 20, at least about 22, at least about 25, at least about 27, at least about 30, at least about 32, at least about 35, at least about 37, or at least about 40 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 50 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 60 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 100 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 125 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 150 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 175 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 200 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 225 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 250 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 275 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 300 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 350 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 400 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 450 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 500 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 550 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 600 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 650 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 700 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 750 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 800 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises SEQ ID NOs:1-15. In some instances, the plurality of targets comprises a coding target, non-coding target, or any combination thereof. In some instances, the coding target comprises an exonic sequence. In other instances, the non-coding target comprises a non-exonic or exonic sequence. In some instances, the non-exonic sequence comprises an untranslated region (e.g., UTR), intronic region, antisense, intergenic region, or any combination thereof. Alternatively, the plurality of targets comprises an anti-sense sequence. In other instances, the plurality of targets comprises a non-coding RNA transcript.


In some instances, characterizing the subject comprises determining whether the subject would respond to an anti-cancer therapy. Alternatively, characterizing the subject comprises identifying the subject as a non-responder to an anti-cancer therapy. Optionally, characterizing the subject comprises identifying the subject as a responder to an anti-cancer therapy.


Before the present invention is described in further detail, it is to be understood that this invention is not limited to the particular methodology, compositions, articles or machines described, as such methods, compositions, articles or machines can, of course, vary. It is also to be understood that the terminology used herein is for the purpose of describing particular embodiments only, and is not intended to limit the scope of the present invention.


DEFINITIONS

Unless defined otherwise or the context clearly dictates otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs. In describing the present invention, the following terms may be employed, and are intended to be defined as indicated below.


The term “polynucleotide” as used herein refers to a polymer of greater than one nucleotide in length of ribonucleic acid (RNA), deoxyribonucleic acid (DNA), hybrid RNA/DNA, modified RNA or DNA, or RNA or DNA mimetics, including peptide nucleic acids (PNAs). The polynucleotides may be single- or double-stranded. The term includes polynucleotides composed of naturally-occurring nucleobases, sugars and covalent internucleoside (backbone) linkages as well as polynucleotides having non-naturally-occurring portions which function similarly. Such modified or substituted polynucleotides are well known in the art and for the purposes of the present invention, are referred to as “analogues.”


“Complementary” or “substantially complementary” refers to the ability to hybridize or base pair between nucleotides or nucleic acids, such as, for instance, between a sensor peptide nucleic acid or polynucleotide and a target polynucleotide. Complementary nucleotides are, generally, A and T (or A and U), or C and G. Two single-stranded polynucleotides or PNAs are said to be substantially complementary when the bases of one strand, optimally aligned and compared and with appropriate insertions or deletions, pair with at least about 80% of the bases of the other strand, usually at least about 90% to 95%, and more preferably from about 98 to 100%.


Alternatively, substantial complementarity exists when a polynucleotide may hybridize under selective hybridization conditions to its complement. Typically, selective hybridization may occur when there is at least about 65% complementarity over a stretch of at least 14 to 25 bases, for example at least about 75%, or at least about 90% complementarity.


“Preferential binding” or “preferential hybridization” refers to the increased propensity of one polynucleotide to bind to its complement in a sample as compared to a noncomplementary polymer in the sample.


Hybridization conditions may typically include salt concentrations of less than about 1 M, more usually less than about 500 mM, for example less than about 200 mM. In the case of hybridization between a peptide nucleic acid and a polynucleotide, the hybridization can be done in solutions containing little or no salt. Hybridization temperatures can be as low as 5° C., but are typically greater than 22° C., and more typically greater than about 30° C., for example in excess of about 37° C. Longer fragments may require higher hybridization temperatures for specific hybridization as is known in the art. Other factors may affect the stringency of hybridization, including base composition and length of the complementary strands, presence of organic solvents and extent of base mismatching, and the combination of parameters used is more important than the absolute measure of any one alone. Other hybridization conditions which may be controlled include buffer type and concentration, solution pH, presence and concentration of blocking reagents to decrease background binding such as repeat sequences or blocking protein solutions, detergent type(s) and concentrations, molecules such as polymers which increase the relative concentration of the polynucleotides, metal ion(s) and their concentration(s), chelator(s) and their concentrations, and other conditions known in the art.


“Multiplexing” herein refers to an assay or other analytical method in which multiple analytes are assayed. In some instances, the multiple analytes are from the same sample. In some instances, the multiple analytes are assayed simultaneously. Alternatively, the multiple analytes are assayed sequentially. In some instances, assaying the multiple analytes occurs in the same reaction volume. Alternatively, assaying the multiple analytes occurs in separate or multiple reaction volumes.


A “target sequence” as used herein (also occasionally referred to as a “PSR” or “probe selection region”) refers to a region of the genome against which one or more probes can be designed. A “target sequence” may be a coding target or a non-coding target. A “target sequence” may comprise exonic and/or non-exonic sequences. Alternatively, a “target sequence” may comprise an ultraconserved region. An ultraconserved region is generally a sequence that is at least 200 base pairs and is conserved across multiple species. An ultraconserved region may be exonic or non-exonic. Exonic sequences may comprise regions on a protein-coding gene, such as an exon, UTR, or a portion thereof. Non-exonic sequences may comprise regions on a protein-coding, non protein-coding gene, or a portion thereof. For example, non-exonic sequences may comprise intronic regions, promoter regions, intergenic regions, a non-coding transcript, an exon anti-sense region, an intronic anti-sense region, UTR anti-sense region, non-coding transcript anti-sense region, or a portion thereof. The term “target sequence” is used interchangeably with the terms “target”, “marker”, and “biomarker” throughout the specification.


As used herein, a probe is any polynucleotide capable of selectively hybridizing to a target sequence or its complement, or to an RNA version of either. A probe may comprise ribonucleotides, deoxyribonucleotides, peptide nucleic acids, and combinations thereof. A probe may optionally comprise one or more labels. In some embodiments, a probe may be used to amplify one or both strands of a target sequence or an RNA form thereof, acting as a sole primer in an amplification reaction or as a member of a set of primers.


As used herein, a non-coding target may comprise a nucleotide sequence. The nucleotide sequence is a DNA or RNA sequence. A non-coding target may include a UTR sequence, an intronic sequence, antisense, or a non-coding RNA transcript. A non-coding target also includes sequences which partially overlap with a UTR sequence or an intronic sequence. A non-coding target also includes non-exonic or exonic transcripts.


As used herein, a coding target includes nucleotide sequences that encode for a protein and peptide sequences. The nucleotide sequence is a DNA or RNA sequence. The coding target includes protein-coding sequence. Protein-coding sequences include exon-coding sequences (e.g., exonic sequences).


As used herein, diagnosis of cancer may include the identification of cancer in a subject, determining the malignancy of the cancer, or determining the stage of the cancer.


As used herein, prognosis of cancer may include predicting the clinical outcome of the patient, assessing the risk of cancer recurrence, determining treatment modality, or determining treatment efficacy.


“Having” is an open-ended phrase like “comprising” and “including,” and includes circumstances where additional elements are included and circumstances where they are not.


“Optional” or “optionally” means that the subsequently described event or circumstance may or may not occur, and that the description includes instances where the event or circumstance occurs and instances in which it does not.


As used herein ‘NED’ describes a clinically distinct disease state in which patients show no evidence of disease (NED′) at least 5 years after surgery, ‘PSA’ describes a clinically distinct disease state in which patients show biochemical relapse only (two successive increases in prostate-specific antigen levels but no other symptoms of disease with at least 5 years follow up after surgery; ‘PSA’) and ‘SYS’ describes a clinically distinct disease state in which patients develop biochemical relapse and present with systemic cancer disease or metastases (‘SYS’) within five years after the initial treatment with radical prostatectomy.


The terms “METS”, “SYS”, “systemic event”, “Systemic progression”, “CR” or “Clinical Recurrence” may be used interchangeably and generally refer to patients that experience BCR (biochemical reccurrence) and that develop metastases (confirmed by bone or CT scan). The patients may experience BCR within 5 years of RP (radical prostatectomy). The patients may develop metastases within 5 years of BCR. In some cases, patients regarded as METS may experience BCR after 5 years of RP. In other cases, patients may exhibit cancer recurrence after radical cystectomy (e.g., bladder cancer recurrence). A further preferred surgery is cystectomy. in particular radical or partial cystectomy. The term “cystectomy” refers to removal of all (radical cystectomy) or part (partial cystectomy) of the urinary bladder. This kind of surgery is usually carried out in invasive bladder cancer. and in particular, muscle invasive bladder cancer.


As used herein, the term “about” refers to approximately a +/−10% variation from a given value. It is to be understood that such a variation is always included in any given value provided herein, whether or not it is specifically referred to.


Use of the singular forms “a,” “an,” and “the” include plural references unless the context clearly dictates otherwise. Thus, for example, reference to “a polynucleotide” includes a plurality of polynucleotides, reference to “a target” includes a plurality of such targets, reference to “a normalization method” includes a plurality of such methods, and the like. Additionally, use of specific plural references, such as “two,” “three,” etc., read on larger numbers of the same subject, unless the context clearly dictates otherwise.


Terms such as “connected,” “attached,” “linked” and “conjugated” are used interchangeably herein and encompass direct as well as indirect connection, attachment, linkage or conjugation unless the context clearly dictates otherwise.


Where a range of values is recited, it is to be understood that each intervening integer value, and each fraction thereof, between the recited upper and lower limits of that range is also specifically disclosed, along with each subrange between such values. The upper and lower limits of any range can independently be included in or excluded from the range, and each range where either, neither or both limits are included is also encompassed within the invention. Where a value being discussed has inherent limits, for example where a component can be present at a concentration of from 0 to 100%, or where the pH of an aqueous solution can range from 1 to 14, those inherent limits are specifically disclosed. Where a value is explicitly recited, it is to be understood that values, which are about the same quantity or amount as the recited value, are also within the scope of the invention, as are ranges based thereon. Where a combination is disclosed, each sub-combination of the elements of that combination is also specifically disclosed and is within the scope of the invention. Conversely, where different elements or groups of elements are disclosed, combinations thereof are also disclosed. Where any element of an invention is disclosed as having a plurality of alternatives, examples of that invention in which each alternative is excluded singly or in any combination with the other alternatives are also hereby disclosed; more than one element of an invention can have such exclusions, and all combinations of elements having such exclusions are hereby disclosed.


Coding and Non-coding Targets

The methods disclosed herein often comprise assaying the expression level of a plurality of targets. The plurality of targets may comprise coding targets and/or non-coding targets of a protein-coding gene or a non protein-coding gene. A protein-coding gene structure may comprise an exon and an intron. The exon may further comprise a coding sequence (CDS) and an untranslated region (UTR). The protein-coding gene may be transcribed to produce a pre-mRNA and the pre-mRNA may be processed to produce a mature mRNA. The mature mRNA may be translated to produce a protein.


A non protein-coding gene structure may comprise an exon and intron. Usually, the exon region of a non protein-coding gene primarily contains a UTR. The non protein-coding gene may be transcribed to produce a pre-mRNA and the pre-mRNA may be processed to produce a non-coding RNA (ncRNA).


A coding target may comprise a coding sequence of an exon. A non-coding target may comprise a UTR sequence of an exon, intron sequence, intergenic sequence, promoter sequence, non-coding transcript, CDS antisense, intronic antisense, UTR antisense, or non-coding transcript antisense. A non-coding transcript may comprise a non-coding RNA (ncRNA).


In some instances, the plurality of targets may be differentially expressed. In some instances, a plurality of probe selection regions (PSRs) is differentially expressed.


In some instances, the plurality of targets comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises at least about 2, at least about 3, at least about 4, at least about 5, at least about 6, at least about 7, at least about 8, at least about 9, or at least about 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In other instances, the plurality of targets comprises at least about 12, at least about 15, at least about 17, at least about 20, at least about 22, at least about 25, at least about 27, at least about 30, at least about 32, at least about 35, at least about 37, or at least about 40 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. The plurality of targets may comprise about 40, 45, 50, 55, 60, 65, 70, 75, 80, 85, 90, 95, 100 or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. The plurality of targets may comprise about 110, 120, 130, 140, 150, 160, 170, 180, 190, 200, 225, 250, 275, 300, 325, 350, 375, 400, 425, 450, 475, 500 or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. The plurality of targets may comprise about 500, 525, 550, 575, 600, 625, 650, 675, 700, 725, 750, 775, 800, 810, 820, 830, 840, 850 or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises a coding target, non-coding target, or any combination thereof. In some instances, the coding target comprises an exonic sequence. In other instances, the non-coding target comprises a non-exonic or exonic sequence. Alternatively, a non-coding target comprises a UTR sequence, an intronic sequence, antisense, or a non-coding RNA transcript. In some instances, a non-coding target comprises sequences which partially overlap with a UTR sequence or an intronic sequence. A non-coding target also includes non-exonic and/or exonic transcripts. Exonic sequences may comprise regions on a protein-coding gene, such as an exon, UTR, or a portion thereof. Non-exonic sequences may comprise regions on a protein-coding, non protein-coding gene, or a portion thereof. For example, non-exonic sequences may comprise intronic regions, promoter regions, intergenic regions, a non-coding transcript, an exon anti-sense region, an intronic anti-sense region, UTR anti-sense region, non-coding transcript anti-sense region, or a portion thereof. In other instances, the plurality of targets comprises a non-coding RNA transcript.


In some instances, the plurality of targets is at least about 70% identical to a sequence selected from SEQ ID NOs 1-1440. Alternatively, the plurality of targets is at least about 80% identical to a sequence selected from SEQ ID NOS 1-1440. In some instances, the plurality of targets is at least about 85% identical to a sequence selected from SEQ ID NOS 1-1440. In some instances, the plurality of targets is at least about 90% identical to a sequence selected from SEQ ID NOS 1-1440. Alternatively, the plurality of targets is at least about 95% identical to a sequence selected from SEQ ID NOS 1-1440.


The plurality of targets may comprise one or more targets selected from a classifier disclosed herein. The classifier may be generated from one or more models or algorithms. The one or more models or algorithms may be Naïve Bayes (NB), recursive Partitioning (Rpart), random forest (RF), support vector machine (SVM), k-nearest neighbor (KNN), high dimensional discriminate analysis (HDDA), or a combination thereof. The classifier may have an AUC of equal to or greater than 0.60. The classifier may have an AUC of equal to or greater than 0.61. The classifier may have an AUC of equal to or greater than 0.62. The classifier may have an AUC of equal to or greater than 0.63. The classifier may have an AUC of equal to or greater than 0.64. The classifier may have an AUC of equal to or greater than 0.65. The classifier may have an AUC of equal to or greater than 0.66. The classifier may have an AUC of equal to or greater than 0.67. The classifier may have an AUC of equal to or greater than 0.68. The classifier may have an AUC of equal to or greater than 0.69. The classifier may have an AUC of equal to or greater than 0.70. The classifier may have an AUC of equal to or greater than 0.75. The classifier may have an AUC of equal to or greater than 0.77. The classifier may have an AUC of equal to or greater than 0.78. The classifier may have an AUC of equal to or greater than 0.79. The classifier may have an AUC of equal to or greater than 0.80. The AUC may be clinically significant based on its 95% confidence interval (CI). The accuracy of the classifier may be at least about 70%. The accuracy of the classifier may be at least about 73%. The accuracy of the classifier may be at least about 75%. The accuracy of the classifier may be at least about 77%. The accuracy of the classifier may be at least about 80%. The accuracy of the classifier may be at least about 83%. The accuracy of the classifier may be at least about 84%. The accuracy of the classifier may be at least about 86%. The accuracy of the classifier may be at least about 88%. The accuracy of the classifier may be at least about 90%. The p-value of the classifier may be less than or equal to 0.05. The p-value of the classifier may be less than or equal to 0.04. The p-value of the classifier may be less than or equal to 0.03. The p-value of the classifier may be less than or equal to 0.02. The p-value of the classifier may be less than or equal to 0.01. The p-value of the classifier may be less than or equal to 0.008. The p-value of the classifier may be less than or equal to 0.006. The p-value of the classifier may be less than or equal to 0.004. The p-value of the classifier may be less than or equal to 0.002. The p-value of the classifier may be less than or equal to 0.001.


The plurality of targets may comprise one or more targets selected from a Random Forest (RF) classifier. The plurality of targets may comprise two or more targets selected from a Random Forest (RF) classifier. The plurality of targets may comprise three or more targets selected from a Random Forest (RF) classifier. The plurality of targets may comprise 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15 or more targets selected from a Random Forest (RF) classifier. The RF classifier may be an RF2, and RF3, or an RF4 classifier. The RF classifier may be an RF15 classifier (e.g., a Random Forest classifier with 15 targets).


In some instances, the plurality of targets is at least about 70% identical to a sequence selected from a target selected from a RF classifier. Alternatively, the plurality of targets is at least about 80% identical to a sequence selected from a target selected from a RF classifier. In some instances, the plurality of targets is at least about 85% identical to a sequence selected from a target selected from a RF classifier. In some instances, the plurality of targets is at least about 90% identical to a sequence selected from a target selected from a RF classifier. Alternatively, the plurality of targets is at least about 95% identical to a sequence selected from a target selected from a RF classifier. The RF classifier may be an RF2 classifier. The RF classifier may be an RF15 classifier.


The RF15 classifier may comprise SEQ ID NO. 1, SEQ ID NO. 2, SEQ ID NO. 3, SEQ ID NO. 4, SEQ ID NO. 5, SEQ ID NO. 6, SEQ ID NO. 7, SEQ ID NO. 8, SEQ ID NO. 9, SEQ ID NO. 10, SEQ ID NO. 11, SEQ ID NO. 12, SEQ ID NO. 13, SEQ ID NO. 14, SEQ ID NO. 15, or a combination thereof. In some instances, the RF2 classifier is selected from Table 11, Table 12, Table 13, Table 14, Table 15, or Table 20. A RF classifier of the present invention may comprise two or more targets comprising two or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.


The plurality of targets may comprise one or more targets selected from an SVM classifier. The plurality of targets may comprise 2, 3, 4, 5, 6, 7, 8, 9, 10 or more targets selected from an SVM classifier. The plurality of targets may comprise 12, 13, 14, 15, 17, 20, 22, 25, 27, 30 or more targets selected from an SVM classifier. The plurality of targets may comprise 32, 35, 37, 40, 43, 45, 47, 50, 53, 55, 57, 60 or more targets selected from an SVM classifier. The SVM classifier may be an SVM2 classifier.


In some instances, the plurality of targets is at least about 70% identical to a sequence selected from a target selected from a SVM classifier. Alternatively, the plurality of targets is at least about 80% identical to a sequence selected from a target selected from a SVM classifier. In some instances, the plurality of targets is at least about 85% identical to a sequence selected from a target selected from a SVM classifier. In some instances, the plurality of targets is at least about 90% identical to a sequence selected from a target selected from a SVM classifier. Alternatively, the plurality of targets is at least about 95% identical to a sequence selected from a target selected from a SVM classifier. The SVM classifier may be an SVM2 classifier. In some instances, the SVM2 classifier is selected from Table 11, Table 12, Table 13, Table 14, Table 15, or Table 20. A SVM classifier of the present invention may comprise two or more targets comprising two or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.


The plurality of targets may comprise one or more targets selected from a KNN classifier. The plurality of targets may comprise 2, 3, 4, 5, 6, 7, 8, 9, 10 or more targets selected from a KNN classifier. The plurality of targets may comprise 12, 13, 14, 15, 17, 20, 22, 25, 27, 30 or more targets selected from a KNN classifier. The plurality of targets may comprise 32, 35, 37, 40, 43, 45, 47, 50, 53, 55, 57, 60 or more targets selected from a KNN classifier. The plurality of targets may comprise 65, 70, 75, 80, 85, 90, 95, 100 or more targets selected from a KNN classifier. The plurality of targets may comprise 125, 150, 175, 200, 225, 250, 275, 300, 325, 350, 375, 390 or more targets selected from a KNN classifier. The KNN classifier may be a KNN2 classifier.


In some instances, the plurality of targets is at least about 70% identical to a sequence selected from a target selected from a KNN classifier. Alternatively, the plurality of targets is at least about 80% identical to a sequence selected from a target selected from a KNN classifier. In some instances, the plurality of targets is at least about 85% identical to a sequence selected from a target selected from a KNN classifier. In some instances, the plurality of targets is at least about 90% identical to a sequence selected from a target selected from a KNN classifier. Alternatively, the plurality of targets is at least about 95% identical to a sequence selected from a target selected from a KNN classifier. The KNN classifier may be a KNN2 classifier. In some instances, the KNN2 classifier is selected from Table 11, Table 12, Table 13, Table 14, Table 15, or Table 20. A KNN classifier of the present invention may comprise two or more targets comprising two or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.


The plurality of targets may comprise one or more targets selected from a Naïve Bayes (NB) classifier. The plurality of targets may comprise 2, 3, 4, 5, 6, 7, 8, 9, 10 or more targets selected from an NB classifier. The plurality of targets may comprise 12, 13, 14, 15, 17, 20, 22, 25, 27, 30 or more targets selected from an NB classifier. The plurality of targets may comprise 32, 35, 37, 40, 43, 45, 47, 50, 53, 55, 57, 60 or more targets selected from a NB classifier. The plurality of targets may comprise 65, 70, 75, 80, 85, 90, 95, 100 or more targets selected from a NB classifier. The plurality of targets may comprise 125, 150, 175, 200, 225, 250, 275, 300, 325, 350, 375, 390 or more targets selected from a NB classifier. The NB classifier may be a NB2 classifier.


In some instances, the plurality of targets is at least about 70% identical to a sequence selected from a target selected from a NB classifier. Alternatively, the plurality of targets is at least about 80% identical to a sequence selected from a target selected from a NB classifier. In some instances, the plurality of targets is at least about 85% identical to a sequence selected from a target selected from a NB classifier. In some instances, the plurality of targets is at least about 90% identical to a sequence selected from a target selected from a NB classifier. Alternatively, the plurality of targets is at least about 95% identical to a sequence selected from a target selected from a NB classifier. The NB classifier may be a NB2 classifier. In some instances, the NB2 classifier is selected from Table 11, Table 12, Table 13, Table 15, or Table 20. An NB classifier of the present invention may comprise two or more targets comprising two or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.


The plurality of targets may comprise one or more targets selected from a recursive Partitioning (Rpart) classifier. The plurality of targets may comprise 2, 3, 4, 5, 6, 7, 8, 9, 10 or more targets selected from an Rpart classifier. The plurality of targets may comprise 12, 13, 14, 15, 17, 20, 22, 25, 27, 30 or more targets selected from an Rpart classifier. The plurality of targets may comprise 32, 35, 37, 40, 43, 45, 47, 50, 53, 55, 57, 60 or more targets selected from an Rpart classifier. The plurality of targets may comprise 65, 70, 75, 80, 85, 90, 95, 100 or more targets selected from an Rpart classifier. The plurality of targets may comprise 125, 150, 175, 200, 225, 250, 275, 300, 325, 350, 375, 390 or more targets selected from an Rpart classifier. The Rpart classifier may be an Rpart2 classifier.


In some instances, the plurality of targets is at least about 70% identical to a sequence selected from a target selected from an Rpart classifier. Alternatively, the plurality of targets is at least about 80% identical to a sequence selected from a target selected from an Rpart classifier. In some instances, the plurality of targets is at least about 85% identical to a sequence selected from a target selected from an Rpart classifier. In some instances, the plurality of targets is at least about 90% identical to a sequence selected from a target selected from an Rpart classifier. Alternatively, the plurality of targets is at least about 95% identical to a sequence selected from a target selected from an Rpart classifier. The Rpart classifier may be an Rpart2 classifier. In some instances, the Rpart2 classifier is selected from Table 11, Table 12, Table 13, Table 14, Table 15, or Table 20. An Rpart classifier of the present invention may comprise two or more targets comprising two or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.


The plurality of targets may comprise one or more targets selected from a high dimensional discriminate analysis (HDDA) classifier. The plurality of targets may comprise two or more targets selected from a high dimensional discriminate analysis (HDDA) classifier. The plurality of targets may comprise three or more targets selected from a high dimensional discriminate analysis (HDDA) classifier. The plurality of targets may comprise 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15 or more targets selected from a high dimensional discriminate analysis (HDDA) classifier.


In some instances, the plurality of targets is at least about 70% identical to a sequence selected from a target selected from a HDDA classifier. Alternatively, the plurality of targets is at least about 80% identical to a sequence selected from a target selected from a HDDA classifier. In some instances, the plurality of targets is at least about 85% identical to a sequence selected from a target selected from a HDDA classifier. In some instances, the plurality of targets is at least about 90% identical to a sequence selected from a target selected from a HDDA classifier. Alternatively, the plurality of targets is at least about 95% identical to a sequence selected from a target selected from a HDDA classifier.


Probes/Primers


The present invention provides for a probe set for diagnosing, monitoring and/or predicting a status or outcome of a cancer in a subject comprising a plurality of probes, wherein (i) the probes in the set are capable of detecting an expression level of at least one non-coding target; and (ii) the expression level determines the cancer status of the subject with at least about 40% specificity.


The probe set may comprise one or more polynucleotide probes. Individual polynucleotide probes comprise a nucleotide sequence derived from the nucleotide sequence of the target sequences or complementary sequences thereof. The nucleotide sequence of the polynucleotide probe is designed such that it corresponds to, or is complementary to the target sequences. The polynucleotide probe can specifically hybridize under either stringent or lowered stringency hybridization conditions to a region of the target sequences, to the complement thereof, or to a nucleic acid sequence (such as a cDNA) derived therefrom.


The selection of the polynucleotide probe sequences and determination of their uniqueness may be carried out in silico using techniques known in the art, for example, based on a BLASTN search of the polynucleotide sequence in question against gene sequence databases, such as the Human Genome Sequence, UniGene, dbEST or the non-redundant database at NCBI. In one embodiment of the invention, the polynucleotide probe is complementary to a region of a target mRNA derived from a target sequence in the probe set. Computer programs can also be employed to select probe sequences that may not cross hybridize or may not hybridize non-specifically.


In some instances, microarray hybridization of RNA, extracted from bladder cancer tissue samples and amplified, may yield a dataset that is then summarized and normalized by the fRMA technique. After removal (or filtration) of cross-hybridizing PSRs, and PSRs containing less than 4 probes, the remaining PSRs can be used in further analysis. Following fRMA and filtration, the data can be decomposed into its principal components and an analysis of variance model is used to determine the extent to which a batch effect remains present in the first 10 principal components.


These remaining PSRs can then be subjected to filtration by a T-test between CR (clinical recurrence) and non-CR samples. Using a p-value cut-off of 0.01, the remaining features (e.g., PSRs) can be further refined. Feature selection can be performed by regularized logistic regression using the elastic-net penalty. The regularized regression may be bootstrapped over 1000 times using all training data; with each iteration of bootstrapping, features that have non-zero co-efficient following 3-fold cross validation can be tabulated. In some instances, features that were selected in at least 25% of the total runs were used for model building.


One skilled in the art understands that the nucleotide sequence of the polynucleotide probe need not be identical to its target sequence in order to specifically hybridize thereto. The polynucleotide probes of the present invention, therefore, comprise a nucleotide sequence that is at least about 65% identical to a region of the coding target or non-coding target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In another embodiment, the nucleotide sequence of the polynucleotide probe is at least about 70% identical a region of the coding target or non-coding target from Table 2B, Table 16 or SEQ ID NOs:1-1440. In another embodiment, the nucleotide sequence of the polynucleotide probe is at least about 75% identical a region of the coding target or non-coding target from Table 2B, Table 16 or SEQ ID NOs:1-1440. In another embodiment, the nucleotide sequence of the polynucleotide probe is at least about 80% identical a region of the coding target or non-coding target from Table 2B, Table 16 or SEQ ID NOs:1-1440. In another embodiment, the nucleotide sequence of the polynucleotide probe is at least about 85% identical a region of the coding target or non-coding target from Table 2B, Table 16 or SEQ ID NOs:1-1440. In another embodiment, the nucleotide sequence of the polynucleotide probe is at least about 90% identical a region of the coding target or non-coding target from Table 2B, Table 16 or SEQ ID NOs:1-1440. In a further embodiment, the nucleotide sequence of the polynucleotide probe is at least about 95% identical to a region of the coding target or non-coding target from Table 2B, Table 16 or SEQ ID NOs:1-1440.


Methods of determining sequence identity are known in the art and can be determined, for example, by using the BLASTN program of the University of Wisconsin Computer Group (GCG) software or provided on the NCB′ website. The nucleotide sequence of the polynucleotide probes of the present invention may exhibit variability by differing (e.g. by nucleotide substitution, including transition or transversion) at one, two, three, four or more nucleotides from the sequence of the coding target or non-coding target.


Other criteria known in the art may be employed in the design of the polynucleotide probes of the present invention. For example, the probes can be designed to have <50% G content. The probes can be designed to have between about 25% and about 70% G+C content. Strategies to optimize probe hybridization to the target nucleic acid sequence can also be included in the process of probe selection.


Hybridization under particular pH, salt, and temperature conditions can be optimized by taking into account melting temperatures and by using empirical rules that correlate with desired hybridization behaviors. Computer models may be used for predicting the intensity and concentration-dependence of probe hybridization.


The polynucleotide probes of the present invention may range in length from about 15 nucleotides to the full length of the coding target or non-coding target. In one embodiment of the invention, the polynucleotide probes are at least about 15 nucleotides in length. In another embodiment, the polynucleotide probes are at least about 20 nucleotides in length. In a further embodiment, the polynucleotide probes are at least about 25 nucleotides in length. In another embodiment, the polynucleotide probes are between about 15 nucleotides and about 500 nucleotides in length. In other embodiments, the polynucleotide probes are between about 15 nucleotides and about 450 nucleotides, about 15 nucleotides and about 400 nucleotides, about 15 nucleotides and about 350 nucleotides, about 15 nucleotides and about 300 nucleotides, about 15 nucleotides and about 250 nucleotides, about 15 nucleotides and about 200 nucleotides in length. In some embodiments, the probes are at least 15 nucleotides in length. In some embodiments, the probes are at least 15 nucleotides in length. In some embodiments, the probes are at least 20 nucleotides, at least 25 nucleotides, at least 50 nucleotides, at least 75 nucleotides, at least 100 nucleotides, at least 125 nucleotides, at least 150 nucleotides, at least 200 nucleotides, at least 225 nucleotides, at least 250 nucleotides, at least 275 nucleotides, at least 300 nucleotides, at least 325 nucleotides, at least 350 nucleotides, at least 375 nucleotides in length.


The polynucleotide probes of a probe set can comprise RNA, DNA, RNA or DNA mimetics, or combinations thereof, and can be single-stranded or double-stranded. Thus the polynucleotide probes can be composed of naturally-occurring nucleobases, sugars and covalent internucleoside (backbone) linkages as well as polynucleotide probes having non-naturally-occurring portions which function similarly. Such modified or substituted polynucleotide probes may provide desirable properties such as, for example, enhanced affinity for a target gene and increased stability. The probe set may comprise a coding target and/or a non-coding target. Preferably, the probe set comprises a combination of a coding target and non-coding target.


In some embodiments, the probe set comprise a plurality of target sequences that hybridize to at least about 5 coding targets and/or non-coding targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. Alternatively, the probe set comprise a plurality of target sequences that hybridize to at least about 10 coding targets and/or non-coding targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the probe set comprise a plurality of target sequences that hybridize to at least about 15 coding targets and/or non-coding targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the probe set comprise a plurality of target sequences that hybridize to at least about 20 coding targets and/or non-coding targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the probe set comprise a plurality of target sequences that hybridize to at least about 30 coding targets and/or non-coding targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. The probe set can comprise a plurality of targets that hybridize to at least about 40, 50, 60, 70, 80, 90, 100 or more coding targets and/or non-coding targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. The probe set can comprise a plurality of targets that hybridize to at least about 100, 125, 150, 175, 200, 225, 250, 275, 300 or more coding targets and/or non-coding targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. The probe set can comprise a plurality of targets that hybridize to at least about 300, 325, 350, 375, 400, 425, 450, 475, 500, 525, 550, 575, 600 or more coding targets and/or non-coding targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. The probe set can comprise a plurality of targets that hybridize to at least about 600, 625, 650, 675, 700, 725, 750, 775, 800, 825, 850 or more coding targets and/or non-coding targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.


In some embodiments, the probe set comprises a plurality of target sequences that hybridize to a plurality of targets, wherein the at least about 20% of the plurality of targets are targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the probe set comprises a plurality of target sequences that hybridize to a plurality of targets, wherein the at least about 25% of the plurality of targets are targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the probe set comprise a plurality of target sequences that hybridize to a plurality of targets, wherein the at least about 30% of the plurality of targets are targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the probe set comprise a plurality of target sequences that hybridize to a plurality of targets, wherein the at least about 35% of the plurality of targets are targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the probe set comprise a plurality of target sequences that hybridize to a plurality of targets, wherein the at least about 40% of the plurality of targets are targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the probe set comprise a plurality of target sequences that hybridize to a plurality of targets, wherein the at least about 45% of the plurality of targets are targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the probe set comprise a plurality of target sequences that hybridize to a plurality of targets, wherein the at least about 50% of the plurality of targets are targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the probe set comprise a plurality of target sequences that hybridize to a plurality of targets, wherein the at least about 60% of the plurality of targets are targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the probe set comprise a plurality of target sequences that hybridize to a plurality of targets, wherein the at least about 70% of the plurality of targets are targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.


The system of the present invention further provides for primers and primer pairs capable of amplifying target sequences defined by the probe set, or fragments or subsequences or complements thereof. The nucleotide sequences of the probe set may be provided in computer-readable media for in silico applications and as a basis for the design of appropriate primers for amplification of one or more target sequences of the probe set.


Primers based on the nucleotide sequences of target sequences can be designed for use in amplification of the target sequences. For use in amplification reactions such as PCR, a pair of primers can be used. The exact composition of the primer sequences is not critical to the invention, but for most applications the primers may hybridize to specific sequences of the probe set under stringent conditions, particularly under conditions of high stringency, as known in the art. The pairs of primers are usually chosen so as to generate an amplification product of at least about 50 nucleotides, more usually at least about 100 nucleotides. Algorithms for the selection of primer sequences are generally known, and are available in commercial software packages. These primers may be used in standard quantitative or qualitative PCR-based assays to assess transcript expression levels of RNAs defined by the probe set. Alternatively, these primers may be used in combination with probes, such as molecular beacons in amplifications using real-time PCR.


In one embodiment, the primers or primer pairs, when used in an amplification reaction, specifically amplify at least a portion of a nucleic acid sequence of a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440 (or subgroups thereof as set forth herein), an RNA form thereof, or a complement to either thereof.


As is known in the art, a nucleoside is a base-sugar combination and a nucleotide is a nucleoside that further includes a phosphate group covalently linked to the sugar portion of the nucleoside. In forming oligonucleotides, the phosphate groups covalently link adjacent nucleosides to one another to form a linear polymeric compound, with the normal linkage or backbone of RNA and DNA being a 3′ to 5′ phosphodiester linkage. Specific examples of polynucleotide probes or primers useful in this invention include oligonucleotides containing modified backbones or non-natural internucleoside linkages. As defined in this specification, oligonucleotides having modified backbones include both those that retain a phosphorus atom in the backbone and those that lack a phosphorus atom in the backbone. For the purposes of the present invention, and as sometimes referenced in the art, modified oligonucleotides that do not have a phosphorus atom in their internucleoside backbone can also be considered to be oligonucleotides.


Exemplary polynucleotide probes or primers having modified oligonucleotide backbones include, for example, those with one or more modified internucleotide linkages that are phosphorothioates, chiral phosphorothioates, phosphorodithioates, phosphotriesters, aminoalkylphosphotriesters, methyl and other alkyl phosphonates including 3′-alkylene phosphonates and chiral phosphonates, phosphinates, phosphoramidates including 3′amino phosphoramidate and aminoalkylphosphoramidates, thionophosphoramidates, thionoalkylphosphonates, thionoalkylphosphotriesters, and boranophosphates having normal 3′-5′ linkages, 2′-5′ linked analogs of these, and those having inverted polarity wherein the adjacent pairs of nucleoside units are linked 3′-5′ to 5′-3′ or 2′-5′ to 5′-2′. Various salts, mixed salts and free acid forms are also included.


Exemplary modified oligonucleotide backbones that do not include a phosphorus atom are formed by short chain alkyl or cycloalkyl internucleoside linkages, mixed heteroatom and alkyl or cycloalkyl internucleoside linkages, or one or more short chain heteroatomic or heterocyclic internucleoside linkages. Such backbones include morpholino linkages (formed in part from the sugar portion of a nucleoside); siloxane backbones; sulfide, sulfoxide and sulphone backbones; formacetyl and thioformacetyl backbones; methylene formacetyl and thioformacetyl backbones; alkene containing backbones; sulphamate backbones; methyleneimino and methylenehydrazino backbones; sulphonate and sulfonamide backbones; amide backbones; and others having mixed N, O, S and CH2 component parts.


The present invention also contemplates oligonucleotide mimetics in which both the sugar and the internucleoside linkage of the nucleotide units are replaced with novel groups. The base units are maintained for hybridization with an appropriate nucleic acid target compound. An example of such an oligonucleotide mimetic, which has been shown to have excellent hybridization properties, is a peptide nucleic acid (PNA). In PNA compounds, the sugar-backbone of an oligonucleotide is replaced with an amide containing backbone, in particular an aminoethylglycine backbone. The nucleobases are retained and are bound directly or indirectly to aza-nitrogen atoms of the amide portion of the backbone.


The present invention also contemplates polynucleotide probes or primers comprising “locked nucleic acids” (LNAs), which may be novel conformationally restricted oligonucleotide analogues containing a methylene bridge that connects the 2′-O of ribose with the 4′-C. LNA and LNA analogues may display very high duplex thermal stabilities with complementary DNA and RNA, stability towards 3′-exonuclease degradation, and good solubility properties. Synthesis of the LNA analogues of adenine, cytosine, guanine, 5-methylcytosine, thymine and uracil, their oligomerization, and nucleic acid recognition properties have been described. Studies of mismatched sequences show that LNA obey the Watson-Crick base pairing rules with generally improved selectivity compared to the corresponding unmodified reference strands.


LNAs may form duplexes with complementary DNA or RNA or with complementary LNA, with high thermal affinities. The universality of LNA-mediated hybridization has been emphasized by the formation of exceedingly stable LNA:LNA duplexes. LNA:LNA hybridization was shown to be the most thermally stable nucleic acid type duplex system, and the RNA-mimicking character of LNA was established at the duplex level. Introduction of three LNA monomers (T or A) resulted in significantly increased melting points toward DNA complements.


Synthesis of 2′-amino-LNA and 2′-methylamino-LNA has been described and thermal stability of their duplexes with complementary RNA and DNA strands reported. Preparation of phosphorothioate-LNA and 2′-thio-LNA have also been described.


Modified polynucleotide probes or primers may also contain one or more substituted sugar moieties. For example, oligonucleotides may comprise sugars with one of the following substituents at the 2′ position: OH; F; O-, S-, or N-alkyl; O-, S-, or N-alkenyl; O-, S- or N-alkynyl; or O-alkyl-O-alkyl, wherein the alkyl, alkenyl and alkynyl may be substituted or unsubstituted C1 to C10 alkyl or C2 to C10 alkenyl and alkynyl. Examples of such groups are: O[(CH2)nO]mCH3, O(CH2)n OCH3, O(CH2)n NH2, O(CH2)n CH3 ONH2, and O(CH2)n, ON[((CH2)nCH3)]2, where n and m are from 1 to about 10. Alternatively, the oligonucleotides may comprise one of the following substituents at the 2′ position: C1 to C10 lower alkyl, substituted lower alkyl, alkaryl, aralkyl, O-alkaryl or O-aralkyl, SH, SCH3, OCN, Cl, Br, CN, CF3, OCF3, SOCH3, SO2 CH3, ONO2, NO2, N3, NH2, heterocycloalkyl, heterocycloalkaryl, aminoalkylamino, polyalkylamino, substituted silyl, an RNA cleaving group, a reporter group, an intercalator, a group for improving the pharmacokinetic properties of an oligonucleotide, or a group for improving the pharmacodynamic properties of an oligonucleotide, and other substituents having similar properties. Specific examples include 2′-methoxyethoxy (2′-O—CH2 CH2 OCH3, also known as 2′-O-(2-methoxyethyl) or 2′-MOE), 2′-dimethylaminooxyethoxy (O(CH2)2 ON(CH3)2 group, also known as 2′-DMA0E), 2′-methoxy (2′-O-CH3), 2′-aminopropoxy (2′-OCH2 CH2 CH2 NH2) and 2′-fluoro (2′-F).


Similar modifications may also be made at other positions on the polynucleotide probes or primers, particularly the 3′ position of the sugar on the 3′ terminal nucleotide or in 21-5′ linked oligonucleotides and the 5′ position of 5′ terminal nucleotide. Polynucleotide probes or primers may also have sugar mimetics such as cyclobutyl moieties in place of the pentofuranosyl sugar.


Polynucleotide probes or primers may also include modifications or substitutions to the nucleobase. As used herein, “unmodified” or “natural” nucleobases include the purine bases adenine (A) and guanine (G), and the pyrimidine bases thymine (T), cytosine (C) and uracil (U).


Modified nucleobases include other synthetic and natural nucleobases such as 5-methylcytosine (5-me-C), 5-hydroxymethyl cytosine, xanthine, hypoxanthine, 2-aminoadenine, 6-methyl and other alkyl derivatives of adenine and guanine, 2-propyl and other alkyl derivatives of adenine and guanine, 2-thiouracil, 2-thiothymine and 2-thiocytosine, 5-halouracil and cytosine, 5-propynyl uracil and cytosine, 6-azo uracil, cytosine and thymine, 5-uracil (pseudouracil), 4-thiouracil, 8-halo, 8-amino, 8-thiol, 8-thioalkyl, 8-hydroxyl and other 8-substituted adenines and guanines, 5-halo particularly 5-bromo, 5-trifluoromethyl and other 5-substituted uracils and cytosines, 7-methylguanine and 7-methyladenine, 8-azaguanine and 8-azaadenine, 7-deazaguanine and 7-deazaadenine and 3-deazaguanine and 3-deazaadenine. Further nucleobases include those disclosed in U.S. Pat. No. 3,687,808; The Concise Encyclopedia Of Polymer Science And Engineering, (1990) pp 858-859, Kroschwitz, J. I., ed. John Wiley & Sons; Englisch et al., Angewandte Chemie, Int. Ed., 30:613 (1991); and Sanghvi, Y. S., (1993) Antisense Research and Applications, pp 289-302, Crooke, S. T. and Lebleu, B., ed., CRC Press. Certain of these nucleobases are particularly useful for increasing the binding affinity of the polynucleotide probes of the invention. These include 5-substituted pyrimidines, 6-azapyrimidines and N-2, N-6 and 0-6 substituted purines, including 2-aminopropyladenine, 5-propynyluracil and 5-propynylcytosine. 5-methylcytosine substitutions have been shown to increase nucleic acid duplex stability by 0.6-1.2° C.


One skilled in the art recognizes that it is not necessary for all positions in a given polynucleotide probe or primer to be uniformly modified. The present invention, therefore, contemplates the incorporation of more than one of the aforementioned modifications into a single polynucleotide probe or even at a single nucleoside within the probe or primer.


One skilled in the art also appreciates that the nucleotide sequence of the entire length of the polynucleotide probe or primer does not need to be derived from the target sequence. Thus, for example, the polynucleotide probe may comprise nucleotide sequences at the 5′ and/or 3′ termini that are not derived from the target sequences. Nucleotide sequences which are not derived from the nucleotide sequence of the target sequence may provide additional functionality to the polynucleotide probe. For example, they may provide a restriction enzyme recognition sequence or a “tag” that facilitates detection, isolation, purification or immobilization onto a solid support. Alternatively, the additional nucleotides may provide a self-complementary sequence that allows the primer/probe to adopt a hairpin configuration. Such configurations are necessary for certain probes, for example, molecular beacon and Scorpion probes, which can be used in solution hybridization techniques.


The polynucleotide probes or primers can incorporate moieties useful in detection, isolation, purification, or immobilization, if desired. Such moieties are well-known in the art (see, for example, Ausubel et al., (1997 & updates) Current Protocols in Molecular Biology, Wiley & Sons, New York) and are chosen such that the ability of the probe to hybridize with its target sequence is not affected.


Examples of suitable moieties are detectable labels, such as radioisotopes, fluorophores, chemiluminophores, enzymes, colloidal particles, and fluorescent microparticles, as well as antigens, antibodies, haptens, avidin/streptavidin, biotin, haptens, enzyme cofactors/substrates, enzymes, and the like.


A label can optionally be attached to or incorporated into a probe or primer polynucleotide to allow detection and/or quantitation of a target polynucleotide representing the target sequence of interest. The target polynucleotide may be the expressed target sequence RNA itself, a cDNA copy thereof, or an amplification product derived therefrom, and may be the positive or negative strand, so long as it can be specifically detected in the assay being used. Similarly, an antibody may be labeled.


In certain multiplex formats, labels used for detecting different targets may be distinguishable. The label can be attached directly (e.g., via covalent linkage) or indirectly, e.g., via a bridging molecule or series of molecules (e.g., a molecule or complex that can bind to an assay component, or via members of a binding pair that can be incorporated into assay components, e.g. biotin-avidin or streptavidin). Many labels are commercially available in activated forms which can readily be used for such conjugation (for example through amine acylation), or labels may be attached through known or determinable conjugation schemes, many of which are known in the art.


Labels useful in the invention described herein include any substance which can be detected when bound to or incorporated into the biomolecule of interest. Any effective detection method can be used, including optical, spectroscopic, electrical, piezoelectrical, magnetic, Raman scattering, surface plasmon resonance, colorimetric, calorimetric, etc. A label is typically selected from a chromophore, a lumiphore, a fluorophore, one member of a quenching system, a chromogen, a hapten, an antigen, a magnetic particle, a material exhibiting nonlinear optics, a semiconductor nanocrystal, a metal nanoparticle, an enzyme, an antibody or binding portion or equivalent thereof, an aptamer, and one member of a binding pair, and combinations thereof. Quenching schemes may be used, wherein a quencher and a fluorophore as members of a quenching pair may be used on a probe, such that a change in optical parameters occurs upon binding to the target introduce or quench the signal from the fluorophore. One example of such a system is a molecular beacon. Suitable quencher/fluorophore systems are known in the art. The label may be bound through a variety of intermediate linkages. For example, a polynucleotide may comprise a biotin-binding species, and an optically detectable label may be conjugated to biotin and then bound to the labeled polynucleotide. Similarly, a polynucleotide sensor may comprise an immunological species such as an antibody or fragment, and a secondary antibody containing an optically detectable label may be added.


Chromophores useful in the methods described herein include any substance which can absorb energy and emit light. For multiplexed assays, a plurality of different signaling chromophores can be used with detectably different emission spectra. The chromophore can be a lumophore or a fluorophore. Typical fluorophores include fluorescent dyes, semiconductor nanocrystals, lanthanide chelates, polynucleotide-specific dyes and green fluorescent protein.


Coding schemes may optionally be used, comprising encoded particles and/or encoded tags associated with different polynucleotides of the invention. A variety of different coding schemes are known in the art, including fluorophores, including SCNCs, deposited metals, and RF tags.


Polynucleotides from the described target sequences may be employed as probes for detecting target sequences expression, for ligation amplification schemes, or may be used as primers for amplification schemes of all or a portion of a target sequences. When amplified, either strand produced by amplification may be provided in purified and/or isolated form.


In one embodiment, polynucleotides of the invention include (a) a nucleic acid depicted in Table 1; (b) an RNA form of any one of the nucleic acids depicted in Table 1; (c) a peptide nucleic acid form of any of the nucleic acids depicted in Table 1; (d) a nucleic acid comprising at least 20 consecutive bases of any of (a-c); (e) a nucleic acid comprising at least 25 bases having at least 90% sequenced identity to any of (a-c); and (f) a complement to any of (a-e).


Complements may take any polymeric form capable of base pairing to the species recited in (a)-(e), including nucleic acid such as RNA or DNA, or may be a neutral polymer such as a peptide nucleic acid. Polynucleotides of the invention can be selected from the subsets of the recited nucleic acids described herein, as well as their complements.


In some embodiments, polynucleotides of the invention comprise at least 20 consecutive bases of the nucleic acid sequence of a target selected from Table 2B, Table 16 or SEQ ID NOs: 1-1440 or a complement thereto. The polynucleotides may comprise at least 21, 22, 23, 24, 25, 27, 30, 32, 35 or more consecutive bases of the nucleic acids sequence of a target selected from Table 1, as applicable.


The polynucleotides may be provided in a variety of formats, including as solids, in solution, or in an array. The polynucleotides may optionally comprise one or more labels, which may be chemically and/or enzymatically incorporated into the polynucleotide.


In one embodiment, solutions comprising polynucleotide and a solvent are also provided. In some embodiments, the solvent may be water or may be predominantly aqueous. In some embodiments, the solution may comprise at least two, three, four, five, six, seven, eight, nine, ten, twelve, fifteen, seventeen, twenty or more different polynucleotides, including primers and primer pairs, of the invention. Additional substances may be included in the solution, alone or in combination, including one or more labels, additional solvents, buffers, biomolecules, polynucleotides, and one or more enzymes useful for performing methods described herein, including polymerases and ligases. The solution may further comprise a primer or primer pair capable of amplifying a polynucleotide of the invention present in the solution.


In some embodiments, one or more polynucleotides provided herein can be provided on a substrate. The substrate can comprise a wide range of material, either biological, nonbiological, organic, inorganic, or a combination of any of these. For example, the substrate may be a polymerized Langmuir Blodgett film, functionalized glass, Si, Ge, GaAs, GaP, SiO2, SiN4, modified silicon, or any one of a wide variety of gels or polymers such as (poly)tetrafluoroethylene, (poly)vinylidenedifluoride, polystyrene, cross-linked polystyrene, polyacrylic, polylactic acid, polyglycolic acid, poly(lactide coglycolide), polyanhydrides, poly(methyl methacrylate), poly(ethylene-co-vinyl acetate), polysiloxanes, polymeric silica, latexes, dextran polymers, epoxies, polycarbonates, or combinations thereof. Conducting polymers and photoconductive materials can be used.


Substrates can be planar crystalline substrates such as silica based substrates (e.g. glass, quartz, or the like), or crystalline substrates used in, e.g., the semiconductor and microprocessor industries, such as silicon, gallium arsenide, indium doped GaN and the like, and include semiconductor nanocrystals.


The substrate can take the form of an array, a photodiode, an optoelectronic sensor such as an optoelectronic semiconductor chip or optoelectronic thin-film semiconductor, or a biochip. The location(s) of probe(s) on the substrate can be addressable; this can be done in highly dense formats, and the location(s) can be microaddressable or nanoaddressable.


Silica aerogels can also be used as substrates, and can be prepared by methods known in the art. Aerogel substrates may be used as free standing substrates or as a surface coating for another substrate material.


The substrate can take any form and typically is a plate, slide, bead, pellet, disk, particle, microparticle, nanoparticle, strand, precipitate, optionally porous gel, sheets, tube, sphere, container, capillary, pad, slice, film, chip, multiwell plate or dish, optical fiber, etc. The substrate can be any form that is rigid or semi-rigid. The substrate may contain raised or depressed regions on which an assay component is located. The surface of the substrate can be etched using known techniques to provide for desired surface features, for example trenches, v-grooves, mesa structures, or the like.


Surfaces on the substrate can be composed of the same material as the substrate or can be made from a different material, and can be coupled to the substrate by chemical or physical means. Such coupled surfaces may be composed of any of a wide variety of materials, for example, polymers, plastics, resins, polysaccharides, silica or silica-based materials, carbon, metals, inorganic glasses, membranes, or any of the above-listed substrate materials. The surface can be optically transparent and can have surface Si—OH functionalities, such as those found on silica surfaces.


The substrate and/or its optional surface can be chosen to provide appropriate characteristics for the synthetic and/or detection methods used. The substrate and/or surface can be transparent to allow the exposure of the substrate by light applied from multiple directions. The substrate and/or surface may be provided with reflective “mirror” structures to increase the recovery of light.


The substrate and/or its surface is generally resistant to, or is treated to resist, the conditions to which it is to be exposed in use, and can be optionally treated to remove any resistant material after exposure to such conditions.


The substrate or a region thereof may be encoded so that the identity of the sensor located in the substrate or region being queried may be determined. Any suitable coding scheme can be used, for example optical codes, RFID tags, magnetic codes, physical codes, fluorescent codes, and combinations of codes.


Preparation of Probes and Primers

The polynucleotide probes or primers of the present invention can be prepared by conventional techniques well-known to those skilled in the art. For example, the polynucleotide probes can be prepared using solid-phase synthesis using commercially available equipment. As is well-known in the art, modified oligonucleotides can also be readily prepared by similar methods. The polynucleotide probes can also be synthesized directly on a solid support according to methods standard in the art. This method of synthesizing polynucleotides is particularly useful when the polynucleotide probes are part of a nucleic acid array.


Polynucleotide probes or primers can be fabricated on or attached to the substrate by any suitable method, for example the methods described in U.S. Pat. No. 5,143,854, PCT Publ. No. WO 92/10092, U.S. patent application Ser. No. 07/624,120, filed Dec. 6, 1990 (now abandoned), Fodor et al., Science, 251: 767-777 (1991), and PCT Publ. No. WO 90/15070). Techniques for the synthesis of these arrays using mechanical synthesis strategies are described in, e.g., PCT Publication No. WO 93/09668 and U.S. Pat. No. 5,384,261. Still further techniques include bead based techniques such as those described in PCT Appl. No. PCT/US93/04145 and pin based methods such as those described in U.S. Pat. No. 5,288,514. Additional flow channel or spotting methods applicable to attachment of sensor polynucleotides to a substrate are described in U.S. patent application Ser. No. 07/980,523, filed Nov. 20, 1992, and U.S. Pat. No. 5,384,261.


Alternatively, the polynucleotide probes of the present invention can be prepared by enzymatic digestion of the naturally occurring target gene, or mRNA or cDNA derived therefrom, by methods known in the art.


Diagnostic Samples

Diagnostic samples for use with the systems and in the methods of the present invention comprise nucleic acids suitable for providing RNAs expression information. In principle, the biological sample from which the expressed RNA is obtained and analyzed for target sequence expression can be any material suspected of comprising cancer tissue or cells. The diagnostic sample can be a biological sample used directly in a method of the invention. Alternatively, the diagnostic sample can be a sample prepared from a biological sample.


In one embodiment, the sample or portion of the sample comprising or suspected of comprising cancer tissue or cells can be any source of biological material, including cells, tissue or fluid, including bodily fluids. Non-limiting examples of the source of the sample include an aspirate, a needle biopsy, a cytology pellet, a bulk tissue preparation or a section thereof obtained for example by surgery or autopsy, lymph fluid, blood, plasma, serum, tumors, and organs. In some embodiments, the sample is from urine. Alternatively, the sample is from blood, plasma or serum. In some embodiments, the sample is from saliva.


The samples may be archival samples, having a known and documented medical outcome, or may be samples from current patients whose ultimate medical outcome is not yet known.


In some embodiments, the sample may be dissected prior to molecular analysis. The sample may be prepared via macrodissection of a bulk tumor specimen or portion thereof, or may be treated via microdissection, for example via Laser Capture Microdissection (LCM).


The sample may initially be provided in a variety of states, as fresh tissue, fresh frozen tissue, fine needle aspirates, and may be fixed or unfixed. Frequently, medical laboratories routinely prepare medical samples in a fixed state, which facilitates tissue storage. A variety of fixatives can be used to fix tissue to stabilize the morphology of cells, and may be used alone or in combination with other agents. Exemplary fixatives include crosslinking agents, alcohols, acetone, Bouin's solution, Zenker solution, Helv solution, osmic acid solution and Carnoy solution.


Crosslinking fixatives can comprise any agent suitable for forming two or more covalent bonds, for example an aldehyde. Sources of aldehydes typically used for fixation include formaldehyde, paraformaldehyde, glutaraldehyde or formalin. Preferably, the crosslinking agent comprises formaldehyde, which may be included in its native form or in the form of paraformaldehyde or formalin. One of skill in the art would appreciate that for samples in which crosslinking fixatives have been used special preparatory steps may be necessary including for example heating steps and proteinase-k digestion; see methods.


One or more alcohols may be used to fix tissue, alone or in combination with other fixatives. Exemplary alcohols used for fixation include methanol, ethanol and isopropanol.


Formalin fixation is frequently used in medical laboratories. Formalin comprises both an alcohol, typically methanol, and formaldehyde, both of which can act to fix a biological sample.


Whether fixed or unfixed, the biological sample may optionally be embedded in an embedding medium. Exemplary embedding media used in histology including paraffin, Tissue-Tek® V.I.P.™, Paramat, Paramat Extra, Paraplast, Paraplast X-tra, Paraplast Plus, Peel Away Paraffin Embedding Wax, Polyester Wax, Carbowax Polyethylene Glycol, Polyfin™, Tissue Freezing Medium TFMFM, Cryo-Gef™, and OCT Compound (Electron Microscopy Sciences, Hatfield, Pa.). Prior to molecular analysis, the embedding material may be removed via any suitable techniques, as known in the art. For example, where the sample is embedded in wax, the embedding material may be removed by extraction with organic solvent(s), for example xylenes. Kits are commercially available for removing embedding media from tissues. Samples or sections thereof may be subjected to further processing steps as needed, for example serial hydration or dehydration steps.


In some embodiments, the sample is a fixed, wax-embedded biological sample. Frequently, samples from medical laboratories are provided as fixed, wax-embedded samples, most commonly as formalin-fixed, paraffin embedded (FFPE) tissues.


Whatever the source of the biological sample, the target polynucleotide that is ultimately assayed can be prepared synthetically (in the case of control sequences), but typically is purified from the biological source and subjected to one or more preparative steps. The RNA may be purified to remove or diminish one or more undesired components from the biological sample or to concentrate it. Conversely, where the RNA is too concentrated for the particular assay, it may be diluted.


RNA Extraction

RNA can be extracted and purified from biological samples using any suitable technique. A number of techniques are known in the art, and several are commercially available (e.g., FormaPure nucleic acid extraction kit, Agencourt Biosciences, Beverly Mass., High Pure FFPE RNA Micro Kit, Roche Applied Science, Indianapolis, Ind.). RNA can be extracted from frozen tissue sections using TRIzol (Invitrogen, Carlsbad, Calif.) and purified using RNeasy Protect kit (Qiagen, Valencia, Calif.). RNA can be further purified using DNAse I treatment (Ambion, Austin, Tex.) to eliminate any contaminating DNA. RNA concentrations can be made using a Nanodrop ND-1000 spectrophotometer (Nanodrop Technologies, Rockland, DE). RNA can be further purified to eliminate contaminants that interfere with cDNA synthesis by cold sodium acetate precipitation. RNA integrity can be evaluated by running electropherograms, and RNA integrity number (RIN, a correlative measure that indicates intactness of mRNA) can be determined using the RNA 6000 PicoAssay for the Bioanalyzer 2100 (Agilent Technologies, Santa Clara, Calif.).


Kits

Kits for performing the desired method(s) are also provided, and comprise a container or housing for holding the components of the kit, one or more vessels containing one or more nucleic acid(s), and optionally one or more vessels containing one or more reagents. The reagents include those described in the composition of matter section above, and those reagents useful for performing the methods described, including amplification reagents, and may include one or more probes, primers or primer pairs, enzymes (including polymerases and ligases), intercalating dyes, labeled probes, and labels that can be incorporated into amplification products.


In some embodiments, the kit comprises primers or primer pairs specific for those subsets and combinations of target sequences described herein. The primers or pairs of primers suitable for selectively amplifying the target sequences. The kit may comprise at least two, three, four or five primers or pairs of primers suitable for selectively amplifying one or more targets. The kit may comprise at least 5, 10, 15, 20, 30, 40, 50, 60, 70, 80, 90, 100 or more primers or pairs of primers suitable for selectively amplifying one or more targets. The kit may comprise at least 100, 125, 150, 175, 200, 250, 300, 350, 400, 450, 500 or more primers or pairs of primers suitable for selectively amplifying one or more targets. The kit may comprise at least 500, 550, 600, 650, 700, 750, 800, 850 or more primers or pairs of primers suitable for selectively amplifying one or more targets.


In some embodiments, the primers or primer pairs of the kit, when used in an amplification reaction, specifically amplify a non-coding target, coding target, exonic, or non-exonic target described herein, at least a portion of a nucleic acid sequence depicted in one of SEQ ID NOs: 1-1440, a nucleic acid sequence corresponding to a target selected from Table 1, an RNA form thereof, or a complement to either thereof. The kit may include a plurality of such primers or primer pairs which can specifically amplify a corresponding plurality of different amplify a non-coding target, coding target, exonic, or non-exonic transcript described herein, nucleic acids depicted in one of SEQ ID NOs: 1-1440, a nucleic acid sequence corresponding to a target selected from Table 1, RNA forms thereof, or complements thereto. At least two, three, four or five primers or pairs of primers suitable for selectively amplifying the one or or targets can be provided in kit form. In some embodiments, the kit comprises from five to fifty primers or pairs of primers suitable for amplifying the one or more targets.


The reagents may independently be in liquid or solid form. The reagents may be provided in mixtures. Control samples and/or nucleic acids may optionally be provided in the kit. Control samples may include tissue and/or nucleic acids obtained from or representative of tumor samples from patients showing no evidence of disease, as well as tissue and/or nucleic acids obtained from or representative of tumor samples from patients that develop systemic cancer.


The nucleic acids may be provided in an array format, and thus an array or microarray may be included in the kit. The kit optionally may be certified by a government agency for use in prognosing the disease outcome of cancer patients and/or for designating a treatment modality.


Instructions for using the kit to perform one or more methods of the invention can be provided with the container, and can be provided in any fixed medium. The instructions may be located inside or outside the container or housing, and/or may be printed on the interior or exterior of any surface thereof. A kit may be in multiplex form for concurrently detecting and/or quantitating one or more different target polynucleotides representing the expressed target sequences.


Devices

Devices useful for performing methods of the invention are also provided. The devices can comprise means for characterizing the expression level of a target sequence of the invention, for example components for performing one or more methods of nucleic acid extraction, amplification, and/or detection. Such components may include one or more of an amplification chamber (for example a thermal cycler), a plate reader, a spectrophotometer, capillary electrophoresis apparatus, a chip reader, and or robotic sample handling components. These components ultimately can obtain data that reflects the expression level of the target sequences used in the assay being employed.


The devices may include an excitation and/or a detection means. Any instrument that provides a wavelength that can excite a species of interest and is shorter than the emission wavelength(s) to be detected can be used for excitation. Commercially available devices can provide suitable excitation wavelengths as well as suitable detection component.


Exemplary excitation sources include a broadband UV light source such as a deuterium lamp with an appropriate filter, the output of a white light source such as a xenon lamp or a deuterium lamp after passing through a monochromator to extract out the desired wavelength(s), a continuous wave (cw) gas laser, a solid state diode laser, or any of the pulsed lasers. Emitted light can be detected through any suitable device or technique; many suitable approaches are known in the art. For example, a fluorimeter or spectrophotometer may be used to detect whether the test sample emits light of a wavelength characteristic of a label used in an assay.


The devices typically comprise a means for identifying a given sample, and of linking the results obtained to that sample. Such means can include manual labels, barcodes, and other indicators which can be linked to a sample vessel, and/or may optionally be included in the sample itself, for example where an encoded particle is added to the sample. The results may be linked to the sample, for example in a computer memory that contains a sample designation and a record of expression levels obtained from the sample. Linkage of the results to the sample can also include a linkage to a particular sample receptacle in the device, which is also linked to the sample identity.


In some instances, the devices also comprise a means for correlating the expression levels of the target sequences being studied with a prognosis of disease outcome. In some instances, such means comprises one or more of a variety of correlative techniques, including lookup tables, algorithms, multivariate models, and linear or nonlinear combinations of expression models or algorithms. The expression levels may be converted to one or more likelihood scores, reflecting likelihood that the patient providing the sample may exhibit a particular disease outcome. The models and/or algorithms can be provided in machine readable format and can optionally further designate a treatment modality for a patient or class of patients.


The device also comprises output means for outputting the disease status, prognosis and/or a treatment modality. Such output means can take any form which transmits the results to a patient and/or a healthcare provider, and may include a monitor, a printed format, or both. The device may use a computer system for performing one or more of the steps provided.


In some embodiments, the method, systems, and kits disclosed herein further comprise the transmission of data/information. For example, data/information derived from the detection and/or quantification of the target may be transmitted to another device and/or instrument. In some instances, the information obtained from an algorithm is transmitted to another device and/or instrument. Transmission of the data/information may comprise the transfer of data/information from a first source to a second source. The first and second sources may be in the same approximate location (e.g., within the same room, building, block, campus). Alternatively, first and second sources may be in multiple locations (e.g., multiple cities, states, countries, continents, etc).


In some instances, transmission of the data/information comprises digital transmission or analog transmission. Digital transmission may comprise the physical transfer of data (a digital bit stream) over a point-to-point or point-to-multipoint communication channel. Examples of such channels are copper wires, optical fibers, wireless communication channels, and storage media. In some embodiments, the data is represented as an electromagnetic signal, such as an electrical voltage, radiowave, microwave, or infrared signal.


Analog transmission may comprise the transfer of a continuously varying analog signal. The messages can either be represented by a sequence of pulses by means of a line code (baseband transmission), or by a limited set of continuously varying wave forms (passband transmission), using a digital modulation method. The passband modulation and corresponding demodulation (also known as detection) can be carried out by modem equipment. According to the most common definition of digital signal, both baseband and passband signals representing bit-streams are considered as digital transmission, while an alternative definition only considers the baseband signal as digital, and passband transmission of digital data as a form of digital-to-analog conversion.


Amplification and Hybridization

Following sample collection and nucleic acid extraction, the nucleic acid portion of the sample comprising RNA that is or can be used to prepare the target polynucleotide(s) of interest can be subjected to one or more preparative reactions. These preparative reactions can include in vitro transcription (IVT), labeling, fragmentation, amplification and other reactions. mRNA can first be treated with reverse transcriptase and a primer to create cDNA prior to detection, quantitation and/or amplification; this can be done in vitro with purified mRNA or in situ, e.g., in cells or tissues affixed to a slide.


By “amplification” is meant any process of producing at least one copy of a nucleic acid, in this case an expressed RNA, and in many cases produces multiple copies. An amplification product can be RNA or DNA, and may include a complementary strand to the expressed target sequence. DNA amplification products can be produced initially through reverse translation and then optionally from further amplification reactions. The amplification product may include all or a portion of a target sequence, and may optionally be labeled. A variety of amplification methods are suitable for use, including polymerase-based methods and ligation-based methods. Exemplary amplification techniques include the polymerase chain reaction method (PCR), the lipase chain reaction (LCR), ribozyme-based methods, self sustained sequence replication (3SR), nucleic acid sequence-based amplification (NASBA), the use of Q Beta replicase, reverse transcription, nick translation, and the like.


Asymmetric amplification reactions may be used to preferentially amplify one strand representing the target sequence that is used for detection as the target polynucleotide. In some cases, the presence and/or amount of the amplification product itself may be used to determine the expression level of a given target sequence. In other instances, the amplification product may be used to hybridize to an array or other substrate comprising sensor polynucleotides which are used to detect and/or quantitate target sequence expression.


The first cycle of amplification in polymerase-based methods typically forms a primer extension product complementary to the template strand. If the template is single-stranded RNA, a polymerase with reverse transcriptase activity is used in the first amplification to reverse transcribe the RNA to DNA, and additional amplification cycles can be performed to copy the primer extension products. The primers for a PCR must, of course, be designed to hybridize to regions in their corresponding template that can produce an amplifiable segment; thus, each primer must hybridize so that its 3′ nucleotide is paired to a nucleotide in its complementary template strand that is located 3′ from the 3′ nucleotide of the primer used to replicate that complementary template strand in the PCR.


The target polynucleotide can be amplified by contacting one or more strands of the target polynucleotide with a primer and a polymerase having suitable activity to extend the primer and copy the target polynucleotide to produce a full-length complementary polynucleotide or a smaller portion thereof. Any enzyme having a polymerase activity that can copy the target polynucleotide can be used, including DNA polymerases, RNA polymerases, reverse transcriptases, enzymes having more than one type of polymerase or enzyme activity. The enzyme can be thermolabile or thermostable. Mixtures of enzymes can also be used. Exemplary enzymes include: DNA polymerases such as DNA Polymerase I (“Pol I”), the Klenow fragment of Pol I, T4, T7, Sequenase® T7, Sequenase® Version 2.0 T7, Tub, Taq, Tth, Pfic, Pfu, Tsp, Tfl, Tli and Pyrococcus sp GB-D DNA polymerases; RNA polymerases such as E. coli, SP6, T3 and T7 RNA polymerases; and reverse transcriptases such as AMV, M-MuLV, MMLV, RNAse H MMLV (SuperScript®), SuperScript® II, ThermoScript®, HIV-1, and RAV2 reverse transcriptases. All of these enzymes are commercially available. Exemplary polymerases with multiple specificities include RAV2 and Tli (exo-) polymerases. Exemplary thermostable polymerases include Tub, Taq, Tth, Pfic, Pfu, Tsp, Tfl, Tli and Pyrococcus sp. GB-D DNA polymerases.


Suitable reaction conditions are chosen to permit amplification of the target polynucleotide, including pH, buffer, ionic strength, presence and concentration of one or more salts, presence and concentration of reactants and cofactors such as nucleotides and magnesium and/or other metal ions (e.g., manganese), optional cosolvents, temperature, thermal cycling profile for amplification schemes comprising a polymerase chain reaction, and may depend in part on the polymerase being used as well as the nature of the sample. Cosolvents include formamide (typically at from about 2 to about 10%), glycerol (typically at from about 5 to about 10%), and DMSO (typically at from about 0.9 to about 10%). Techniques may be used in the amplification scheme in order to minimize the production of false positives or artifacts produced during amplification. These include “touchdown” PCR, hot-start techniques, use of nested primers, or designing PCR primers so that they form stem-loop structures in the event of primer-dimer formation and thus are not amplified. Techniques to accelerate PCR can be used, for example centrifugal PCR, which allows for greater convection within the sample, and comprising infrared heating steps for rapid heating and cooling of the sample. One or more cycles of amplification can be performed. An excess of one primer can be used to produce an excess of one primer extension product during PCR; preferably, the primer extension product produced in excess is the amplification product to be detected. A plurality of different primers may be used to amplify different target polynucleotides or different regions of a particular target polynucleotide within the sample.


An amplification reaction can be performed under conditions which allow an optionally labeled sensor polynucleotide to hybridize to the amplification product during at least part of an amplification cycle. When the assay is performed in this manner, real-time detection of this hybridization event can take place by monitoring for light emission or fluorescence during amplification, as known in the art.


Where the amplification product is to be used for hybridization to an array or microarray, a number of suitable commercially available amplification products are available. These include amplification kits available from NuGEN, Inc. (San Carlos, Calif.), including the WT-Ovation™ System, WT-Ovation™ System v2, WT-Ovation™ Pico System, WT-Ovation′m FFPE Exon Module, WT-Ovation™ FFPE Exon Module RiboAmp and RiboAmp Plus RNA Amplification Kits (MDS Analytical Technologies (formerly Arcturus) (Mountain View, Calif.), Genisphere, Inc. (Hatfield, Pa.), including the RampUp Plus™ and SenseAmp™ RNA Amplification kits, alone or in combination. Amplified nucleic acids may be subjected to one or more purification reactions after amplification and labeling, for example using magnetic beads (e.g., RNAClean magnetic beads, Agencourt Biosciences).


Multiple RNA biomarkers can be analyzed using real-time quantitative multiplex RT-PCR platforms and other multiplexing technologies such as GenomeLab GeXP Genetic Analysis System (Beckman Coulter, Foster City, Calif.), SmartCycler® 9600 or GeneXpert(R) Systems (Cepheid, Sunnyvale, Calif.), ABI 7900 HT Fast Real Time PCR system (Applied Biosystems, Foster City, Calif.), LightCycler® 480 System (Roche Molecular Systems, Pleasanton, Calif.), xMAP 100 System (Luminex, Austin, Tex.) Solexa Genome Analysis System (Illumina, Hayward, Calif.), OpenArray Real Time qPCR (BioTrove, Woburn, Mass.) and BeadXpress System (Illumina, Hayward, Calif.).


Detection and/or Quantification of Target Sequences


Any method of detecting and/or quantitating the expression of the encoded target sequences can in principle be used in the invention. The expressed target sequences can be directly detected and/or quantitated, or may be copied and/or amplified to allow detection of amplified copies of the expressed target sequences or its complement.


Methods for detecting and/or quantifying a target can include Northern blotting, sequencing, array or microarray hybridization, by enzymatic cleavage of specific structures (e.g., an Invader® assay, Third Wave Technologies, e.g. as described in U.S. Pat. Nos. 5,846,717, 6,090,543; 6,001,567; 5,985,557; and 5,994,069) and amplification methods, e.g. RT-PCR, including in a TaqMan® assay (PE Biosystems, Foster City, Calif., e.g. as described in U.S. Pat. Nos. 5,962,233 and 5,538,848), and may be quantitative or semi-quantitative, and may vary depending on the origin, amount and condition of the available biological sample. Combinations of these methods may also be used. For example, nucleic acids may be amplified, labeled and subjected to microarray analysis.


In some instances, target sequences may be detected by sequencing. Sequencing methods may comprise whole genome sequencing or exome sequencing. Sequencing methods such as Maxam-Gilbert, chain-termination, or high-throughput systems may also be used. Additional, suitable sequencing techniques include classic dideoxy sequencing reactions (Sanger method) using labeled terminators or primers and gel separation in slab or capillary, sequencing by synthesis using reversibly terminated labeled nucleotides, pyrosequencing, 454 sequencing, allele specific hybridization to a library of labeled oligonucleotide probes, sequencing by synthesis using allele specific hybridization to a library of labeled clones that is followed by ligation, real time monitoring of the incorporation of labeled nucleotides during a polymerization step, and SOLiD sequencing.


Additional methods for detecting and/or quantifying a target include single-molecule sequencing (e.g., Helicos, PacBio), sequencing by synthesis (e.g., Illumina, Ion Torrent), sequencing by ligation (e.g., ABI SOLID), sequencing by hybridization (e.g., Complete Genomics), in situ hybridization, bead-array technologies (e.g., Luminex xMAP, Illumina BeadChips), branched DNA technology (e.g., Panomics, Genisphere). Sequencing methods may use fluorescent (e.g., Illumina) or electronic (e.g., Ion Torrent, Oxford Nanopore) methods of detecting nucleotides.


Reverse Transcription for QRT-PCR Analysis

Reverse transcription can be performed by any method known in the art. For example, reverse transcription may be performed using the Omniscript kit (Qiagen, Valencia, Calif.), Superscript III kit (Invitrogen, Carlsbad, Calif.), for RT-PCR. Target-specific priming can be performed in order to increase the sensitivity of detection of target sequences and generate target-specific cDNA.


TaqMan® Gene Expression Analysis

TaqMan®RT-PCR can be performed using Applied Biosystems Prism (ABI) 7900 HT instruments in a 5 1.11 volume with target sequence-specific cDNA equivalent to 1 ng total RNA.


Primers and probes concentrations for TaqMan analysis are added to amplify fluorescent amplicons using PCR cycling conditions such as 95° C. for 10 minutes for one cycle, 95° C. for 20 seconds, and 60° C. for 45 seconds for 40 cycles. A reference sample can be assayed to ensure reagent and process stability. Negative controls (e.g., no template) should be assayed to monitor any exogenous nucleic acid contamination.


Classification Arrays

The present invention contemplates that a probe set or probes derived therefrom may be provided in an array format. In the context of the present invention, an “array” is a spatially or logically organized collection of polynucleotide probes. An array comprising probes specific for a coding target, non-coding target, or a combination thereof may be used. Alternatively, an array comprising probes specific for two or more of transcripts of a target selected from Table 2B, Table 16 or SEQ ID NOs: 1-1440 or a product derived thereof can be used. Desirably, an array may be specific for 5, 10, 15, 20, 25, 30, 50, 75, 100, 150, 200 or more of transcripts of a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. The array may be specific for 200, 225, 250, 275, 300, 325, 350, 375, 400 or more of the transcripts of a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. The array may be specific for 400, 425, 450, 475, 500, 525, 550, 575, 600 or more of the transcripts of a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. The array may be specific for 600, 625, 650, 675, 700, 725, 750, 775, 800, 825, 850 or more of the transcripts of a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. Expression of these sequences may be detected alone or in combination with other transcripts. In some embodiments, an array is used which comprises a wide range of sensor probes for bladder-specific expression products, along with appropriate control sequences. In some instances, the array may comprise the Human Exon 1.0 ST Array (HuEx 1.0 ST, Affymetrix, Inc., Santa Clara, Calif.).


Typically the polynucleotide probes are attached to a solid substrate and are ordered so that the location (on the substrate) and the identity of each are known. The polynucleotide probes can be attached to one of a variety of solid substrates capable of withstanding the reagents and conditions necessary for use of the array. Examples include, but are not limited to, polymers, such as (poly)tetrafluoroethylene, (poly)vinylidenedifluoride, polystyrene, polycarbonate, polypropylene and polystyrene; ceramic; silicon; silicon dioxide; modified silicon; (fused) silica, quartz or glass; functionalized glass; paper, such as filter paper; diazotized cellulose; nitrocellulose filter; nylon membrane; and polyacrylamide gel pad. Substrates that are transparent to light are useful for arrays that may be used in an assay that involves optical detection.


Examples of array formats include membrane or filter arrays (for example, nitrocellulose, nylon arrays), plate arrays (for example, multiwell, such as a 24-, 96-, 256-, 384-, 864- or 1536-well, microtitre plate arrays), pin arrays, and bead arrays (for example, in a liquid “slurry”). Arrays on substrates such as glass or ceramic slides are often referred to as chip arrays or “chips.” Such arrays are well known in the art. In one embodiment of the present invention, the Cancer Prognosticarray is a chip.


Data Analysis

In some embodiments, one or more pattern recognition methods can be used in analyzing the expression level of target sequences. The pattern recognition method can comprise a linear combination of expression levels, or a nonlinear combination of expression levels. In some embodiments, expression measurements for RNA transcripts or combinations of RNA transcript levels are formulated into linear or non-linear models or algorithms (e.g., an ‘expression signature’) and converted into a likelihood score. This likelihood score indicates the probability that a biological sample is from a patient who may exhibit no evidence of disease, who may exhibit systemic cancer, or who may exhibit biochemical recurrence. The likelihood score can be used to distinguish these disease states. The models and/or algorithms can be provided in machine readable format, and may be used to correlate expression levels or an expression profile with a disease state, and/or to designate a treatment modality for a patient or class of patients.


Assaying the expression level for a plurality of targets may comprise the use of an algorithm or classifier. Array data can be managed, classified, and analyzed using techniques known in the art. Assaying the expression level for a plurality of targets may comprise probe set modeling and data pre-processing. Probe set modeling and data pre-processing can be derived using the Robust Multi-Array (RMA) algorithm or variants GC-RMA, frozen robust multichip average (fRMA), Single Channel Array Normalization (SCAN), ComBat (Combining Batches of gene expression), Probe Logarithmic Intensity Error (PLIER) algorithm or variant iterPLIER. Variance or intensity filters can be applied to pre-process data using the RMA algorithm, for example by removing target sequences with a standard deviation of <10 or a mean intensity of <100 intensity units of a normalized data range, respectively.


Alternatively, assaying the expression level for a plurality of targets may comprise the use of a machine learning algorithm. The machine learning algorithm may comprise a supervised learning algorithm. Examples of supervised learning algorithms may include Average One-Dependence Estimators (AODE), Artificial neural network (e.g., Backpropagation), Bayesian statistics (e.g., Naive Bayes classifier, Bayesian network, Bayesian knowledge base), Case-based reasoning, Decision trees, Inductive logic programming, Gaussian process regression, Group method of data handling (GMDH), Learning Automata, Learning Vector Quantization, Minimum message length (decision trees, decision graphs, etc.), Lazy learning, Instance-based learning Nearest Neighbor Algorithm, Analogical modeling, Probably approximately correct learning (PAC) learning, Ripple down rules, a knowledge acquisition methodology, Symbolic machine learning algorithms, Subsymbolic machine learning algorithms, Support vector machines, Random Forests, Ensembles of classifiers, Bootstrap aggregating (bagging), and Boosting. Supervised learning may comprise ordinal classification such as regression analysis and Information fuzzy networks (IFN). Alternatively, supervised learning methods may comprise statistical classification, such as AODE, Linear classifiers (e.g., Fisher's linear discriminant, Logistic regression, Naive Bayes classifier, Perceptron, and Support vector machine), quadratic classifiers, k-nearest neighbor, Boosting, Decision trees (e.g., C4.5, Random forests), Bayesian networks, and Hidden Markov models.


The machine learning algorithms may also comprise an unsupervised learning algorithm. Examples of unsupervised learning algorithms may include artificial neural network, Data clustering, Expectation-maximization algorithm, Self-organizing map, Radial basis function network, Vector Quantization, Generative topographic map, Information bottleneck method, and IBSEAD. Unsupervised learning may also comprise association rule learning algorithms such as Apriori algorithm, Eclat algorithm and FP-growth algorithm. Hierarchical clustering, such as Single-linkage clustering and Conceptual clustering, may also be used. Alternatively, unsupervised learning may comprise partitional clustering such as K-means algorithm and Fuzzy clustering.


In some instances, the machine learning algorithms comprise a reinforcement learning algorithm. Examples of reinforcement learning algorithms include, but are not limited to, temporal difference learning, Q-learning and Learning Automata. Alternatively, the machine learning algorithm may comprise Data Pre-processing.


Preferably, the machine learning algorithms may include, but are not limited to, Average One-Dependence Estimators (AODE), Fisher's linear discriminant, Logistic regression, Perceptron, Multilayer Perceptron, Artificial Neural Networks, Support vector machines, Quadratic classifiers, Boosting, Decision trees, C4.5, Bayesian networks, Hidden Markov models, High-Dimensional Discriminant Analysis, and Gaussian Mixture Models. The machine learning algorithm may comprise support vector machines, Naïve Bayes classifier, k-nearest neighbor, high-dimensional discriminant analysis, or Gaussian mixture models. In some instances, the machine learning algorithm comprises Random Forests.


Additional Techniques and Tests

Factors known in the art for diagnosing and/or suggesting, selecting, designating, recommending or otherwise determining a course of treatment for a patient or class of patients suspected of having cancer can be employed in combination with measurements of the target sequence expression. The methods disclosed herein may include additional techniques such as cytology, histology, ultrasound analysis, MRI results, CT scan results, and measurements of PSA levels.


Certified tests for classifying disease status and/or designating treatment modalities may also be used in diagnosing, predicting, and/or monitoring the status or outcome of a cancer in a subject. A certified test may comprise a means for characterizing the expression levels of one or more of the target sequences of interest, and a certification from a government regulatory agency endorsing use of the test for classifying the disease status of a biological sample.


In some embodiments, the certified test may comprise reagents for amplification reactions used to detect and/or quantitate expression of the target sequences to be characterized in the test. An array of probe nucleic acids can be used, with or without prior target amplification, for use in measuring target sequence expression.


The test is submitted to an agency having authority to certify the test for use in distinguishing disease status and/or outcome. Results of detection of expression levels of the target sequences used in the test and correlation with disease status and/or outcome are submitted to the agency. A certification authorizing the diagnostic and/or prognostic use of the test is obtained.


Also provided are portfolios of expression levels comprising a plurality of normalized expression levels of the target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. Such portfolios may be provided by performing the methods described herein to obtain expression levels from an individual patient or from a group of patients. The expression levels can be normalized by any method known in the art; exemplary normalization methods that can be used in various embodiments include Robust Multichip Average (RMA), frozen robust multichip average (fRMA), Single Channel Array Normalization (SCAN), ComBat (Combining Batches of gene expression), probe logarithmic intensity error estimation (PLIER), non-linear fit (NLFIT) quantile-based and nonlinear normalization, and combinations thereof. Background correction can also be performed on the expression data; exemplary techniques useful for background correction include mode of intensities, normalized using median polish probe modeling and sketch-normalization.


In some embodiments, portfolios are established such that the combination of genes in the portfolio exhibit improved sensitivity and specificity relative to known methods. In considering a group of genes for inclusion in a portfolio, a small standard deviation in expression measurements correlates with greater specificity. Other measurements of variation such as correlation coefficients can also be used in this capacity. The invention also encompasses the above methods where the expression level determines the status or outcome of a cancer in the subject with at least about 45% specificity. In some embodiments, the expression level determines the status or outcome of a cancer in the subject with at least about 50% specificity. In some embodiments, the expression level determines the status or outcome of a cancer in the subject with at least about 55% specificity. In some embodiments, the expression level determines the status or outcome of a cancer in the subject with at least about 60% specificity. In some embodiments, the expression level determines the status or outcome of a cancer in the subject with at least about 65% specificity. In some embodiments, the expression level determines the status or outcome of a cancer in the subject with at least about 70% specificity. In some embodiments, the expression level determines the status or outcome of a cancer in the subject with at least about 75% specificity. In some embodiments, the expression level determines the status or outcome of a cancer in the subject with at least about 80% specificity. In some embodiments, t the expression level determines the status or outcome of a cancer in the subject with at least about 85% specificity. In some embodiments, the expression level determines the status or outcome of a cancer in the subject with at least about 90% specificity. In some embodiments, the expression level determines the status or outcome of a cancer in the subject with at least about 95% specificity.


The invention also encompasses the any of the methods disclosed herein where the accuracy of diagnosing, monitoring, and/or predicting a status or outcome of a cancer is at least about 45%. In some embodiments, the accuracy of diagnosing, monitoring, and/or predicting a status or outcome of a cancer is at least about 50%. In some embodiments, the accuracy of diagnosing, monitoring, and/or predicting a status or outcome of a cancer is at least about 55%. In some embodiments, the accuracy of diagnosing, monitoring, and/or predicting a status or outcome of a cancer is at least about 60%. In some embodiments, the accuracy of diagnosing, monitoring, and/or predicting a status or outcome of a cancer is at least about 65%. In some embodiments, the accuracy of diagnosing, monitoring, and/or predicting a status or outcome of a cancer is at least about 70%. In some embodiments, the accuracy of diagnosing, monitoring, and/or predicting a status or outcome of a cancer is at least about 75%. In some embodiments, the accuracy of diagnosing, monitoring, and/or predicting a status or outcome of a cancer is at least about 80%. In some embodiments, the accuracy of diagnosing, monitoring, and/or predicting a status or outcome of a cancer is at least about 85%. In some embodiments, the accuracy of diagnosing, monitoring, and/or predicting a status or outcome of a cancer is at least about 90%. In some embodiments, the accuracy of diagnosing, monitoring, and/or predicting a status or outcome of a cancer is at least about 95%.


The accuracy of a classifier or biomarker may be determined by the 95% confidence interval (CI). Generally, a classifier or biomarker is considered to have good accuracy if the 95% CI does not overlap 1. In some instances, the 95% CI of a classifier or biomarker is at least about 1.08, 1.10, 1.12, 1.14, 1.15, 1.16, 1.17, 1.18, 1.19, 1.20, 1.21, 1.22, 1.23, 1.24, 1.25, 1.26, 1.27, 1.28, 1.29, 1.30, 1.31, 1.32, 1.33, 1.34, or 1.35 or more. The 95% CI of a classifier or biomarker may be at least about 1.14, 1.15, 1.16, 1.20, 1.21, 1.26, or 1.28. The 95% CI of a classifier or biomarker may be less than about 1.75, 1.74, 1.73, 1.72, 1.71, 1.70, 1.69, 1.68, 1.67, 1.66, 1.65, 1.64, 1.63, 1.62, 1.61, 1.60, 1.59, 1.58, 1.57, 1.56, 1.55, 1.54, 1.53, 1.52, 1.51, 1.50 or less. The 95% CI of a classifier or biomarker may be less than about 1.61, 1.60, 1.59, 1.58, 1.56, 1.55, or 1.53. The 95% CI of a classifier or biomarker may be between about 1.10 to 1.70, between about 1.12 to about 1.68, between about 1.14 to about 1.62, between about 1.15 to about 1.61, between about 1.15 to about 1.59, between about 1.16 to about 1.160, between about 1.19 to about 1.55, between about 1.20 to about 1.54, between about 1.21 to about 1.53, between about 1.26 to about 1.63, between about 1.27 to about 1.61, or between about 1.28 to about 1.60.


In some instances, the accuracy of a biomarker or classifier is dependent on the difference in range of the 95% CI (e.g., difference in the high value and low value of the 95% CI interval). Generally, biomarkers or classifiers with large differences in the range of the 95% CI interval have greater variability and are considered less accurate than biomarkers or classifiers with small differences in the range of the 95% CI intervals. In some instances, a biomarker or classifier is considered more accurate if the difference in the range of the 95% CI is less than about 0.60, 0.55, 0.50, 0.49, 0.48, 0.47, 0.46, 0.45, 0.44, 0.43, 0.42, 0.41, 0.40, 0.39, 0.38, 0.37, 0.36, 0.35, 0.34, 0.33, 0.32, 0.31, 0.30, 0.29, 0.28, 0.27, 0.26, 0.25 or less. The difference in the range of the 95% CI of a biomarker or classifier may be less than about 0.48, 0.45, 0.44, 0.42, 0.40, 0.37, 0.35, 0.33, or 0.32. In some instances, the difference in the range of the 95% CI for a biomarker or classifier is between about 0.25 to about 0.50, between about 0.27 to about 0.47, or between about 0.30 to about 0.45.


The invention also encompasses the any of the methods disclosed herein where the sensitivity is at least about 45%. In some embodiments, the sensitivity is at least about 50%. In some embodiments, the sensitivity is at least about 55%. In some embodiments, the sensitivity is at least about 60%. In some embodiments, the sensitivity is at least about 65%. In some embodiments, the sensitivity is at least about 70%. In some embodiments, the sensitivity is at least about 75%. In some embodiments, the sensitivity is at least about 80%. In some embodiments, the sensitivity is at least about 85%. In some embodiments, the sensitivity is at least about 90%. In some embodiments, the sensitivity is at least about 95%.


In some instances, the classifiers or biomarkers disclosed herein are clinically significant. In some instances, the clinical significance of the classifiers or biomarkers is determined by the AUC value. In order to be clinically significant, the AUC value is at least about 0.5, 0.55, 0.6, 0.65, 0.7, 0.75, 0.8, 0.85, 0.9, or 0.95. The clinical significance of the classifiers or biomarkers can be determined by the percent accuracy. For example, a classifier or biomarker is determined to be clinically significant if the accuracy of the classifier or biomarker is at least about 50%, 55%, 60%, 65%, 70%, 72%, 75%, 77%, 80%, 82%, 84%, 86%, 88%, 90%, 92%, 94%, 96%, or 98%. In other instances, the clinical significance of the classifiers or biomarkers is determined by the median fold difference (MDF) value. In order to be clinically significant, the MDF value is at least about 0.8, 0.9, 1.0, 1.1, 1.2, 1.3, 1.4, 1.5, 1.6, 1.7, 1.9, or 2.0. In some instances, the MDF value is greater than or equal to 1.1. In other instances, the MDF value is greater than or equal to 1.2. Alternatively, or additionally, the clinical significance of the classifiers or biomarkers is determined by the t-test P-value. In some instances, in order to be clinically significant, the t-test P-value is less than about 0.070, 0.065, 0.060, 0.055, 0.050, 0.045, 0.040, 0.035, 0.030, 0.025, 0.020, 0.015, 0.010, 0.005, 0.004, or 0.003. The t-test P-value can be less than about 0.050. Alternatively, the t-test P-value is less than about 0.010. In some instances, the clinical significance of the classifiers or biomarkers is determined by the clinical outcome. For example, different clinical outcomes can have different minimum or maximum thresholds for AUC values, MDF values, t-test P-values, and accuracy values that would determine whether the classifier or biomarker is clinically significant. In another example, a classifier or biomarker is considered clinically significant if the P-value of the t-test was less than about 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01, 0.005, 0.004, 0.003, 0.002, or 0.001. In some instances, the P-value may be based on any of the following comparisons: BCR vs non-BCR, CP vs non-CP, PCSM vs non-PCSM. For example, a classifier or biomarker is determined to be clinically significant if the P-values of the differences between the KM curves for BCR vs non-BCR, CP vs non-CP, PCSM vs non-PCSM is lower than about 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01, 0.005, 0.004, 0.003, 0.002, or 0.001.


In some instances, the performance of the classifier or biomarker is based on the odds ratio. A classifier or biomarker may be considered to have good performance if the odds ratio is at least about 1.30, 1.31, 1.32, 1.33, 1.34, 1.35, 1.36, 1.37, 1.38, 1.39, 1.40, 1.41, 1.42, 1.43, 1.44, 1.45, 1.46, 1.47, 1.48, 1.49, 1.50, 1.52, 1.55, 1.57, 1.60, 1.62, 1.65, 1.67, 1.70 or more. In some instances, the odds ratio of a classifier or biomarker is at least about 1.33.


The clinical significance of the classifiers and/or biomarkers may be based on Univariable Analysis Odds Ratio P-value (uvaORPval). The Univariable Analysis Odds Ratio P-value (uvaORPval) of the classifier and/or biomarker may be between about 0-0.4. The Univariable Analysis Odds Ratio P-value (uvaORPval) of the classifier and/or biomarker may be between about 0-0.3. The Univariable Analysis Odds Ratio P-value (uvaORPval) of the classifier and/or biomarker may be between about 0-0.2. The Univariable Analysis Odds Ratio P-value (uvaORPval) of the classifier and/or biomarker may be less than or equal to 0.25, 0.22, 0.21, 0.20, 0.19, 0.18, 0.17, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11. The Univariable Analysis Odds Ratio P-value (uvaORPval) of the classifier and/or biomarker may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The Univariable Analysis Odds Ratio P-value (uvaORPval) of the classifier and/or biomarker may be less than or equal to 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The clinical significance of the classifiers and/or biomarkers may be based on multivariable analysis Odds Ratio P-value (mvaORPval). The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier and/or biomarker may be between about 0-1. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier and/or biomarker may be between about 0-0.9. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier and/or biomarker may be between about 0-0.8. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier and/or biomarker may be less than or equal to 0.90, 0.88, 0.86, 0.84, 0.82, 0.80. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier and/or biomarker may be less than or equal to 0.78, 0.76, 0.74, 0.72, 0.70, 0.68, 0.66, 0.64, 0.62, 0.60, 0.58, 0.56, 0.54, 0.52, 0.50. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier and/or biomarker may be less than or equal to 0.48, 0.46, 0.44, 0.42, 0.40, 0.38, 0.36, 0.34, 0.32, 0.30, 0.28, 0.26, 0.25, 0.22, 0.21, 0.20, 0.19, 0.18, 0.17, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier and/or biomarker may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The multivariable analysis Odds Ratio P-value (mvaORPval) of the classifier and/or biomarker may be less than or equal to 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The clinical significance of the classifiers and/or biomarkers may be based on the Kaplan Meier P-value (KM P-value). The Kaplan Meier P-value (KM P-value) of the classifier and/or biomarker may be between about 0-0.8. The Kaplan Meier P-value (KM P-value) of the classifier and/or biomarker may be between about 0-0.7. The Kaplan Meier P-value (KM P-value) of the classifier and/or biomarker may be less than or equal to 0.80, 0.78, 0.76, 0.74, 0.72, 0.70, 0.68, 0.66, 0.64, 0.62, 0.60, 0.58, 0.56, 0.54, 0.52, 0.50. The Kaplan Meier P-value (KM P-value) of the classifier and/or biomarker may be less than or equal to 0.48, 0.46, 0.44, 0.42, 0.40, 0.38, 0.36, 0.34, 0.32, 0.30, 0.28, 0.26, 0.25, 0.22, 0.21, 0.20, 0.19, 0.18, 0.17, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11. The Kaplan Meier P-value (KM P-value) of the classifier and/or biomarker may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The Kaplan Meier P-value (KM P-value) of the classifier and/or biomarker may be less than or equal to 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The clinical significance of the classifiers and/or biomarkers may be based on the survival AUC value (survAUC). The survival AUC value (survAUC) of the classifier and/or biomarker may be between about 0-1. The survival AUC value (survAUC) of the classifier and/or biomarker may be between about 0-0.9. The survival AUC value (survAUC) of the classifier and/or biomarker may be less than or equal to 1, 0.98, 0.96, 0.94, 0.92, 0.90, 0.88, 0.86, 0.84, 0.82, 0.80. The survival AUC value (survAUC) of the classifier and/or biomarker may be less than or equal to 0.80, 0.78, 0.76, 0.74, 0.72, 0.70, 0.68, 0.66, 0.64, 0.62, 0.60, 0.58, 0.56, 0.54, 0.52, 0.50. The survival AUC value (survAUC) of the classifier and/or biomarker may be less than or equal to 0.48, 0.46, 0.44, 0.42, 0.40, 0.38, 0.36, 0.34, 0.32, 0.30, 0.28, 0.26, 0.25, 0.22, 0.21, 0.20, 0.19, 0.18, 0.17, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11. The survival AUC value (survAUC) of the classifier and/or biomarker may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The survival AUC value (survAUC) of the classifier and/or biomarker may be less than or equal to 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The clinical significance of the classifiers and/or biomarkers may be based on the Univariable Analysis Hazard Ratio P-value (uvaHRPval). The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier and/or biomarker may be between about 0-0.4. The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier and/or biomarker may be between about 0-0.3. The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier and/or biomarker may be less than or equal to 0.40, 0.38, 0.36, 0.34, 0.32. The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier and/or biomarker may be less than or equal to 0.30, 0.29, 0.28, 0.27, 0.26, 0.25, 0.24, 0.23, 0.22, 0.21, 0.20. The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier and/or biomarker may be less than or equal to 0.19, 0.18, 0.17, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11. The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier and/or biomarker may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The Univariable Analysis Hazard Ratio P-value (uvaHRPval) of the classifier and/or biomarker may be less than or equal to 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The clinical significance of the classifiers and/or biomarkers may be based on the Multivariable Analysis Hazard Ratio P-value (mvaHRPval). The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier and/or biomarker may be between about 0-1. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier and/or biomarker may be between about 0-0.9. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier and/or biomarker may be less than or equal to 1, 0.98, 0.96, 0.94, 0.92, 0.90, 0.88, 0.86, 0.84, 0.82, 0.80. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier and/or biomarker may be less than or equal to 0.80, 0.78, 0.76, 0.74, 0.72, 0.70, 0.68, 0.66, 0.64, 0.62, 0.60, 0.58, 0.56, 0.54, 0.52, 0.50. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier and/or biomarker may be less than or equal to 0.48, 0.46, 0.44, 0.42, 0.40, 0.38, 0.36, 0.34, 0.32, 0.30, 0.28, 0.26, 0.25, 0.22, 0.21, 0.20, 0.19, 0.18, 0.17, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier and/or biomarker may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier and/or biomarker may be less than or equal to 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The clinical significance of the classifiers and/or biomarkers may be based on the Multivariable Analysis Hazard Ratio P-value (mvaHRPval). The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier and/or biomarker may be between about 0 to about 0.60. significance of the classifier and/or biomarker may be based on the Multivariable Analysis Hazard Ratio P-value (mvaHRPval). The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier and/or biomarker may be between about 0 to about 0.50. significance of the classifier and/or biomarker may be based on the Multivariable Analysis Hazard Ratio P-value (mvaHRPval). The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier and/or biomarker may be less than or equal to 0.50, 0.47, 0.45, 0.43, 0.40, 0.38, 0.35, 0.33, 0.30, 0.28, 0.25, 0.22, 0.20, 0.18, 0.16, 0.15, 0.14, 0.13, 0.12, 0.11, 0.10. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier and/or biomarker may be less than or equal to 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02, 0.01. The Multivariable Analysis Hazard Ratio P-value (mvaHRPval) of the classifier and/or biomarker may be less than or equal to 0.01, 0.009, 0.008, 0.007, 0.006, 0.005, 0.004, 0.003, 0.002, 0.001.


The classifiers and/or biomarkers disclosed herein may outperform current classifiers or clinical variables in providing clinically relevant analysis of a sample from a subject. In some instances, the classifiers or biomarkers may more accurately predict a clinical outcome or status as compared to current classifiers or clinical variables. For example, a classifier or biomarker may more accurately predict metastatic disease. Alternatively, a classifier or biomarker may more accurately predict no evidence of disease. In some instances, the classifier or biomarker may more accurately predict death from a disease. The performance of a classifier or biomarker disclosed herein may be based on the AUC value, odds ratio, 95% CI, difference in range of the 95% CI, p-value or any combination thereof.


The performance of the classifiers and/or biomarkers disclosed herein may be determined by AUC values and an improvement in performance may be determined by the difference in the AUC value of the classifier or biomarker disclosed herein and the AUC value of current classifiers or clinical variables. In some instances, a classifier and/or biomarker disclosed herein outperforms current classifiers or clinical variables when the AUC value of the classifier and/or or biomarker disclosed herein is greater than the AUC value of the current classifiers or clinical variables by at least about 0.05, 0.06, 0.07, 0.08, 0.09, 0.10, 0.11, 0.12, 0.13, 0.14, 0.15, 0.16, 0.17, 0.18, 0.19, 0.20, 0.022, 0.25, 0.27, 0.30, 0.32, 0.35, 0.37, 0.40, 0.42, 0.45, 0.47, 0.50 or more. In some instances, the AUC value of the classifier and/or or biomarker disclosed herein is greater than the AUC value of the current classifiers or clinical variables by at least about 0.10. In some instances, the AUC value of the classifier and/or or biomarker disclosed herein is greater than the AUC value of the current classifiers or clinical variables by at least about 0.13. In some instances, the AUC value of the classifier and/or or biomarker disclosed herein is greater than the AUC value of the current classifiers or clinical variables by at least about 0.18.


The performance of the classifiers and/or biomarkers disclosed herein may be determined by the odds ratios and an improvement in performance may be determined by comparing the odds ratio of the classifier or biomarker disclosed herein and the odds ratio of current classifiers or clinical variables. Comparison of the performance of two or more classifiers, biomarkers, and/or clinical variables can be generally be based on the comparison of the absolute value of (1-odds ratio) of a first classifier, biomarker or clinical variable to the absolute value of (1-odds ratio) of a second classifier, biomarker or clinical variable. Generally, the classifier, biomarker or clinical variable with the greater absolute value of (1-odds ratio) can be considered to have better performance as compared to the classifier, biomarker or clinical variable with a smaller absolute value of (1-odds ratio).


In some instances, the performance of a classifier, biomarker or clinical variable is based on the comparison of the odds ratio and the 95% confidence interval (CI). For example, a first classifier, biomarker or clinical variable may have a greater absolute value of (1-odds ratio) than a second classifier, biomarker or clinical variable, however, the 95% CI of the first classifier, biomarker or clinical variable may overlap 1 (e.g., poor accuracy), whereas the 95% CI of the second classifier, biomarker or clinical variable does not overlap 1. In this instance, the second classifier, biomarker or clinical variable is considered to outperform the first classifier, biomarker or clinical variable because the accuracy of the first classifier, biomarker or clinical variable is less than the accuracy of the second classifier, biomarker or clinical variable. In another example, a first classifier, biomarker or clinical variable may outperform a second classifier, biomarker or clinical variable based on a comparison of the odds ratio; however, the difference in the 95% CI of the first classifier, biomarker or clinical variable is at least about 2 times greater than the 95% CI of the second classifier, biomarker or clinical variable. In this instance, the second classifier, biomarker or clinical variable is considered to outperform the first classifier.


In some instances, a classifier or biomarker disclosed herein more accurate than a current classifier or clinical variable. The classifier or biomarker disclosed herein is more accurate than a current classifier or clinical variable if the range of 95% CI of the classifier or biomarker disclosed herein does not span or overlap 1 and the range of the 95% CI of the current classifier or clinical variable spans or overlaps 1.


In some instances, a classifier or biomarker disclosed herein more accurate than a current classifier or clinical variable. The classifier or biomarker disclosed herein is more accurate than a current classifier or clinical variable when difference in range of the 95% CI of the classifier or biomarker disclosed herein is about 0.70, 0.60, 0.50, 0.40, 0.30, 0.20, 0.15, 0.14, 0.13, 0.12, 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02 times less than the difference in range of the 95% CI of the current classifier or clinical variable. The classifier or biomarker disclosed herein is more accurate than a current classifier or clinical variable when difference in range of the 95% CI of the classifier or biomarker disclosed herein between about 0.20 to about 0.04 times less than the difference in range of the 95% CI of the current classifier or clinical variable.


In some instances, the methods disclosed herein may comprise the use of a genomic classifier (GC) model. A general method for developing a GC model may comprise (a) providing a sample from a subject suffering from a cancer; (b) assaying the expression level for a plurality of targets; (c) generating a model by using a machine learning algorithm. In some instances, the machine learning algorithm comprises Random Forests. In another example, a GC model may developed by using a machine learning algorithm to analyze and rank genomic features. Analyzing the genomic features may comprise classifying one or more genomic features. The method may further comprise validating the classifier and/or refining the classifier by using a machine learning algorithm.


The methods disclosed herein may comprise generating one or more clinical classifiers (CC). The clinical classifier can be developed using one or more clinicopathologic variables. The clinicopathologic variables may be selected from the group comprising Lymph node invasion status (LNI); Surgical Margin Status (SMS); Seminal Vesicle Invasion (SVI); Extra Capsular Extension (ECE); Pathological Gleason Score; and the pre-operative PSA. The clinicopathologic variables may be selected from the group comprising Tumor Stage (e.g., CIS, Ta, T1, T2, T2a, T2b, T3, T3a, T4a, T4b), Nodal Status (e.g., NO, NI, N2, or N3), Lymphovascular invasion, age, or gender. The method may comprise using one or more of the clinicopathologic variables as binary variables. Alternatively, or additionally, the one or more clinicopathologic variables may be converted to a logarithmic value (e.g., log 10). The method may further comprise assembling the variables in a logistic regression. In some instances, the CC is combined with the GC to produce a genomic clinical classifier (GCC).


In some instances, the methods disclosed herein may comprise the use of a genomic-clinical classifier (GCC) model. A general method for developing a GCC model may comprise (a) providing a sample from a subject suffering from a cancer; (b) assaying the expression level for a plurality of targets; (c) generating a model by using a machine learning algorithm. In some instances, the machine learning algorithm comprises Random Forests.


Cancer

The systems, compositions and methods disclosed herein may be used to diagnosis, monitor and/or predict the status or outcome of a cancer. Generally, a cancer is characterized by the uncontrolled growth of abnormal cells anywhere in a body. The abnormal cells may be termed cancer cells, malignant cells, or tumor cells. Many cancers and the abnormal cells that compose the cancer tissue are further identified by the name of the tissue that the abnormal cells originated from (for example, bladder cancer, lung cancer, colon cancer, prostate cancer, pancreatic cancer, thyroid cancer). Cancer is not confined to humans; animals and other living organisms can get cancer.


In some instances, the cancer may be malignant. Alternatively, the cancer may be benign. The cancer may be a recurrent and/or refractory cancer. Most cancers can be classified as a carcinoma, sarcoma, leukemia, lymphoma, myeloma, or a central nervous system cancer.


The cancer may be a sarcoma. Sarcomas are cancers of the bone, cartilage, fat, muscle, blood vessels, or other connective or supportive tissue. Sarcomas include, but are not limited to, bone cancer, fibrosarcoma, chondrosarcoma, Ewing's sarcoma, malignant hemangioendothelioma, malignant schwannoma, bilateral vestibular schwannoma, osteosarcoma, soft tissue sarcomas (e.g. alveolar soft part sarcoma, angiosarcoma, cystosarcoma phylloides, dermatofibrosarcoma, desmoid tumor, epithelioid sarcoma, extraskeletal osteosarcoma, fibrosarcoma, hemangiopericytoma, hemangiosarcoma, Kaposi's sarcoma, leiomyosarcoma, liposarcoma, lymphangiosarcoma, lymphosarcoma, malignant fibrous histiocytoma, neurofibrosarcoma, rhabdomyosarcoma, and synovial sarcoma).


Alternatively, the cancer may be a carcinoma. Carcinomas are cancers that begin in the epithelial cells, which are cells that cover the surface of the body, produce hormones, and make up glands. By way of non-limiting example, carcinomas include breast cancer, pancreatic cancer, lung cancer, colon cancer, colorectal cancer, rectal cancer, kidney cancer, bladder cancer, stomach cancer, prostate cancer, liver cancer, ovarian cancer, brain cancer, vaginal cancer, vulvar cancer, uterine cancer, oral cancer, penic cancer, testicular cancer, esophageal cancer, skin cancer, cancer of the fallopian tubes, head and neck cancer, gastrointestinal stromal cancer, adenocarcinoma, cutaneous or intraocular melanoma, cancer of the anal region, cancer of the small intestine, cancer of the endocrine system, cancer of the thyroid gland, cancer of the parathyroid gland, cancer of the adrenal gland, cancer of the urethra, cancer of the renal pelvis, cancer of the ureter, cancer of the endometrium, cancer of the cervix, cancer of the pituitary gland, neoplasms of the central nervous system (CNS), primary CNS lymphoma, brain stem glioma, and spinal axis tumors. In some instances, the cancer is a skin cancer, such as a basal cell carcinoma, squamous, melanoma, nonmelanoma, or actinic (solar) keratosis. Preferably, the cancer is a bladder cancer. Alternatively, the cancer may be a thyroid cancer, prostate cancer, or pancreatic cancer.


In some instances, the cancer is a lung cancer. Lung cancer can start in the airways that branch off the trachea to supply the lungs (bronchi) or the small air sacs of the lung (the alveoli). Lung cancers include non-small cell lung carcinoma (NSCLC), small cell lung carcinoma, and mesotheliomia. Examples of NSCLC include squamous cell carcinoma, adenocarcinoma, and large cell carcinoma. The mesothelioma may be a cancerous tumor of the lining of the lung and chest cavitity (pleura) or lining of the abdomen (peritoneum). The mesothelioma may be due to asbestos exposure. The cancer may be a brain cancer, such as a glioblastoma.


In some instances, the cancer is a bladder cancer. Bladder cancer is the fourth most common type of cancer in men and the ninth most common cancer in women. Invasive bladder cancer has a high propensity for recurrence. In some instances, the bladder cancer can be non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer.


Alternatively, the cancer may be a central nervous system (CNS) tumor. CNS tumors may be classified as gliomas or nongliomas. The glioma may be malignant glioma, high grade glioma, diffuse intrinsic pontine glioma. Examples of gliomas include astrocytomas, oligodendrogliomas (or mixtures of oligodendroglioma and astocytoma elements), and ependymomas. Astrocytomas include, but are not limited to, low-grade astrocytomas, anaplastic astrocytomas, glioblastoma multiforme, pilocytic astrocytoma, pleomorphic xanthoastrocytoma, and subependymal giant cell astrocytoma. Oligodendrogliomas include low-grade oligodendrogliomas (or oligoastrocytomas) and anaplastic oligodendriogliomas. Nongliomas include meningiomas, pituitary adenomas, primary CNS lymphomas, and medulloblastomas. In some instances, the cancer is a meningioma.


The cancer may be a leukemia. The leukemia may be an acute lymphocytic leukemia, acute myelocytic leukemia, chronic lymphocytic leukemia, or chronic myelocytic leukemia. Additional types of leukemias include hairy cell leukemia, chronic myelomonocytic leukemia, and juvenile myelomonocytic-leukemia.


In some instances, the cancer is a lymphoma. Lymphomas are cancers of the lymphocytes and may develop from either B or T lymphocytes. The two major types of lymphoma are Hodgkin's lymphoma, previously known as Hodgkin's disease, and non-Hodgkin's lymphoma. Hodgkin's lymphoma is marked by the presence of the Reed-Stemberg cell. Non-Hodgkin's lymphomas are all lymphomas which are not Hodgkin's lymphoma. Non-Hodgkin lymphomas may be indolent lymphomas and aggressive lymphomas. Non-Hodgkin's lymphomas include, but are not limited to, diffuse large B cell lymphoma, follicular lymphoma, mucosa-associated lymphatic tissue lymphoma (MALT), small cell lymphocytic lymphoma, mantle cell lymphoma, Burkitt's lymphoma, mediastinal large B cell lymphoma, Waldenström macroglobulinemia, nodal marginal zone B cell lymphoma (NMZL), splenic marginal zone lymphoma (SMZL), extranodal marginal zone B cell lymphoma, intravascular large B cell lymphoma, primary effusion lymphoma, and lymphomatoid granulomatosis.


Cancer Staging

Diagnosing, predicting, or monitoring a status or outcome of a cancer may comprise determining the stage of the cancer. Generally, the stage of a cancer is a description (usually numbers I to IV with IV having more progression) of the extent the cancer has spread. The stage often takes into account the size of a tumor, how deeply it has penetrated, whether it has invaded adjacent organs, how many lymph nodes it has metastasized to (if any), and whether it has spread to distant organs. Staging of cancer can be used as a predictor of survival, and cancer treatment may be determined by staging. Determining the stage of the cancer may occur before, during, or after treatment. The stage of the cancer may also be determined at the time of diagnosis.


Cancer staging can be divided into a clinical stage and a pathologic stage. Cancer staging may comprise the TNM classification. Generally, the TNM Classification of Malignant Tumours (TNM) is a cancer staging system that describes the extent of cancer in a patient's body. T may describe the size of the tumor and whether it has invaded nearby tissue, N may describe regional lymph nodes that are involved, and M may describe distant metastasis (spread of cancer from one body part to another). In the TNM (Tumor, Node, Metastasis) system, clinical stage and pathologic stage are denoted by a small “c” or “p” before the stage (e.g., cT3N1M0 or pT2N0).


Often, clinical stage and pathologic stage may differ. Clinical stage may be based on all of the available information obtained before a surgery to remove the tumor. Thus, it may include information about the tumor obtained by physical examination, radiologic examination, and endoscopy. Pathologic stage can add additional information gained by examination of the tumor microscopically by a pathologist. Pathologic staging can allow direct examination of the tumor and its spread, contrasted with clinical staging which may be limited by the fact that the information is obtained by making indirect observations at a tumor which is still in the body. The TNM staging system can be used for most forms of cancer.


Alternatively, staging may comprise Ann Arbor staging. Generally, Ann Arbor staging is the staging system for lymphomas, both in Hodgkin's lymphoma (previously called Hodgkin's disease) and Non-Hodgkin lymphoma (abbreviated NHL). The stage may depend on both the place where the malignant tissue is located (as located with biopsy, CT scanning and increasingly positron emission tomography) and on systemic symptoms due to the lymphoma (“B symptoms”: night sweats, weight loss of >10% or fevers). The principal stage may be determined by location of the tumor. Stage I may indicate that the cancer is located in a single region, usually one lymph node and the surrounding area. Stage I often may not have outward symptoms. Stage II can indicate that the cancer is located in two separate regions, an affected lymph node or organ and a second affected area, and that both affected areas are confined to one side of the diaphragm—that is, both are above the diaphragm, or both are below the diaphragm. Stage III often indicates that the cancer has spread to both sides of the diaphragm, including one organ or area near the lymph nodes or the spleen. Stage IV may indicate diffuse or disseminated involvement of one or more extralymphatic organs, including any involvement of the liver, bone marrow, or nodular involvement of the lungs.


Modifiers may also be appended to some stages. For example, the letters A, B, E, X, or S can be appended to some stages. Generally, A or B may indicate the absence of constitutional (B-type) symptoms is denoted by adding an “A” to the stage; the presence is denoted by adding a “B” to the stage. E can be used if the disease is “extranodal” (not in the lymph nodes) or has spread from lymph nodes to adjacent tissue. X is often used if the largest deposit is >10 cm large (“bulky disease”), or whether the mediastinum is wider than ⅓ of the chest on a chest X-ray. S may be used if the disease has spread to the spleen.


The nature of the staging may be expressed with CS or PS. CS may denote that the clinical stage as obtained by doctor's examinations and tests. PS may denote that the pathological stage as obtained by exploratory laparotomy (surgery performed through an abdominal incision) with splenectomy (surgical removal of the spleen).


TNM classification may be used as the staging system for bladder tumors. In this aspect, the staging system takes into account how deep the tumor has grown into the bladder, whether there is cancer in the lymph nodes and whether the cancer has spread to any other part of the body. According to the TNM staging system, bladder cancer can be staged as follows: In bladder cancer stage 0, cancer cells are confined to the mucosa. In bladder cancer stage I the tumor invades the subepithelial connective tissue/lamina propria. In bladder cancer stage II cancer cells have invaded the muscularis propria but the tumor is still organ-confined. In bladder cancer stage III cancer cells have extended through the bladder wall to the perivesical tissue or to the Prostatic stroma, uterus or vagina. In bladder cancer stage IV cancer cells have proliferated to the lymph nodes, pelvic or abdominal wall, and/or other organs. The “bladder cancer” in the context of the present invention, may encompass any of the aforementioned stages.


Markers for Bladder Cancer

Several biomarkers for bladder cancer diagnosis have been described. The BTA-Stat test detects complement factor H (CFH) and related proteins (CFH-rp). The nuclear matrix protein 22 (NMP22) test (Matritech, Newton, Mass.) is a double monoclonal antibody test designed to measure quantitatively the nuclear mitotic apparatus (MUMA) protein. The ImmunoCyt test (Diagno-Cure Inc., Sainte-Foy, Quebec Canada) detects bladder cancer markers present on exfoliated cells using a cocktail of fluorescent antibodies (19A211, M344 and LDQ10). The UroVysion test (Vysis Chicago, Ill.) employs centromere probes specific to chromosomes 3, 7, 17 and 9 to detect aneuploidy associated with bladder cancer. Other markers for bladder cancer include survivin, cytokeratins, telomerase, BLCA-4, microsatellite detection, hyaluronic acid and hyaluronidase, urine fibronectin, and chorionic gonadotropin. Use of these markers in combination with the markers and genomic classifiers of the present invention are specifically contemplated herein.


Therapeutic Regimens

Diagnosing, predicting, or monitoring a status or outcome of a cancer may comprise treating a cancer or preventing a cancer progression. In addition, diagnosing, predicting, or monitoring a status or outcome of a cancer may comprise identifying or predicting responders to an anti-cancer therapy. In some instances, diagnosing, predicting, or monitoring may comprise determining a therapeutic regimen. Determining a therapeutic regimen may comprise administering an anti-cancer therapy. Alternatively, determining a therapeutic regimen may comprise modifying, recommending, continuing or discontinuing an anti-cancer regimen. In some instances, if the sample expression patterns are consistent with the expression pattern for a known disease or disease outcome, the expression patterns can be used to designate one or more treatment modalities (e.g., therapeutic regimens, anti-cancer regimen). An anti-cancer regimen may comprise one or more anti-cancer therapies. Examples of anti-cancer therapies include surgery, chemotherapy, radiation therapy, immunotherapy/biological therapy, photodynamic therapy.


Surgical oncology uses surgical methods to diagnose, stage, and treat cancer, and to relieve certain cancer-related symptoms. Surgery may be used to remove the tumor (e.g., excisions, resections, debulking surgery), reconstruct a part of the body (e.g., restorative surgery), and/or to relieve symptoms such as pain (e.g., palliative surgery). Surgery may also include cryosurgery. Cryosurgery (also called cryotherapy) may use extreme cold produced by liquid nitrogen (or argon gas) to destroy abnormal tissue. Cryosurgery can be used to treat external tumors, such as those on the skin. For external tumors, liquid nitrogen can be applied directly to the cancer cells with a cotton swab or spraying device. Cryosurgery may also be used to treat tumors inside the body (internal tumors and tumors in the bone). For internal tumors, liquid nitrogen or argon gas may be circulated through a hollow instrument called a cryoprobe, which is placed in contact with the tumor. An ultrasound or MRI may be used to guide the cryoprobe and monitor the freezing of the cells, thus limiting damage to nearby healthy tissue. A ball of ice crystals may form around the probe, freezing nearby cells. Sometimes more than one probe is used to deliver the liquid nitrogen to various parts of the tumor. The probes may be put into the tumor during surgery or through the skin (percutaneously). After cryosurgery, the frozen tissue thaws and may be naturally absorbed by the body (for internal tumors), or may dissolve and form a scab (for external tumors).


As used herein the term “tumor margin” refers to the tissue surrounding a discernible tumor. In the case of surgical removal of a solid tumor, the tumor margin is the tissue cut away with the discernible tumor that usually appears to be normal to the naked eye. More particularly, as used herein, “margin” refers to the edge, border or boundary of a tumor. The margin generally extends from about 1 mm to about 4 mm from the primary tumor but can be greater depending upon the size of the primary solid tumor. As used herein, the terms “surgical margin”, “tumor free margin”, “free margin”, “normal skin margin”, and “normal tissue margin” refer to the visible normal tissue or skin margin that is removed with the surgical excision of a tumor, growth, or malignancy. Surgical margin as read in a pathology report define the histological measurement of normal or unaffected tissue surrounding the visible tumor under a microscope on a glass mounted histology section. A “narrow” surgical margin implies that the tumor exists very close to the surgical margin, and a “wide” surgical margin implies the tumor exists far from the cut edge or the surgical margin.


Chemotherapeutic agents may also be used for the treatment of cancer. Examples of chemotherapeutic agents include alkylating agents, anti-metabolites, plant alkaloids and terpenoids, vinca alkaloids, podophyllotoxin, taxanes, topoisomerase inhibitors, and cytotoxic antibiotics. Cisplatin, carboplatin, and oxaliplatin are examples of alkylating agents. Other alkylating agents include mechlorethamine, cyclophosphamide, chlorambucil, ifosfamide. Alkylating agens may impair cell function by forming covalent bonds with the amino, carboxyl, sulfhydryl, and phosphate groups in biologically important molecules. Alternatively, alkylating agents may chemically modify a cell's DNA.


Anti-metabolites are another example of chemotherapeutic agents. Anti-metabolites may masquerade as purines or pyrimidines and may prevent purines and pyrimidines from becoming incorporated in to DNA during the “S” phase (of the cell cycle), thereby stopping normal development and division. Antimetabolites may also affect RNA synthesis. Examples of metabolites include azathioprine and mercaptopurine.


Alkaloids may be derived from plants and block cell division may also be used for the treatment of cancer. Alkyloids may prevent microtubule function. Examples of alkaloids are vinca alkaloids and taxanes. Vinca alkaloids may bind to specific sites on tubulin and inhibit the assembly of tubulin into microtubules (M phase of the cell cycle). The vinca alkaloids may be derived from the Madagascar periwinkle, Catharanthus roseus (formerly known as Vinca rosea). Examples of vinca alkaloids include, but are not limited to, vincristine, vinblastine, vinorelbine, or vindesine. Taxanes are diterpenes produced by the plants of the genus Taxus (yews). Taxanes may be derived from natural sources or synthesized artificially. Taxanes include paclitaxel (Taxol) and docetaxel (Taxotere). Taxanes may disrupt microtubule function. Microtubules are essential to cell division, and taxanes may stabilize GDP-bound tubulin in the microtubule, thereby inhibiting the process of cell division. Thus, in essence, taxanes may be mitotic inhibitors. Taxanes may also be radiosensitizing and often contain numerous chiral centers.


Alternative chemotherapeutic agents include podophyllotoxin. Podophyllotoxin is a plant-derived compound that may help with digestion and may be used to produce cytostatic drugs such as etoposide and teniposide. They may prevent the cell from entering the G1 phase (the start of DNA replication) and the replication of DNA (the S phase).


Topoisomerases are essential enzymes that maintain the topology of DNA. Inhibition of type I or type II topoisomerases may interfere with both transcription and replication of DNA by upsetting proper DNA supercoiling. Some chemotherapeutic agents may inhibit topoisomerases. For example, some type I topoisomerase inhibitors include camptothecins: irinotecan and topotecan. Examples of type II inhibitors include amsacrine, etoposide, etoposide phosphate, and teniposide.


Another example of chemotherapeutic agents is cytotoxic antibiotics. Cytotoxic antibiotics are a group of antibiotics that are used for the treatment of cancer because they may interfere with DNA replication and/or protein synthesis. Cytotoxic antiobiotics include, but are not limited to, actinomycin, anthracyclines, doxorubicin, daunorubicin, valrubicin, idarubicin, epirubicin, bleomycin, plicamycin, and mitomycin.


Chemotherapeutic agents may be used alone or in combination. Examples of therapeutic combinations used to treat bladder cancer include: Gemcitabine and cisplatin; Methotrexate, vinblastine, doxorubicin (Adriamycin), and cisplatin (called M-VAC); Carboplatin and either paclitaxel or docetaxel (for patients with poor kidney function).


In some instances, the anti-cancer treatment may comprise radiation therapy. Radiation can come from a machine outside the body (external-beam radiation therapy) or from radioactive material placed in the body near cancer cells (internal radiation therapy, more commonly called brachytherapy). Systemic radiation therapy uses a radioactive substance, given by mouth or into a vein that travels in the blood to tissues throughout the body.


External-beam radiation therapy may be delivered in the form of photon beams (either x-rays or gamma rays). A photon is the basic unit of light and other forms of electromagnetic radiation. An example of external-beam radiation therapy is called 3-dimensional conformal radiation therapy (3D-CRT). 3D-CRT may use computer software and advanced treatment machines to deliver radiation to very precisely shaped target areas. Many other methods of external-beam radiation therapy are currently being tested and used in cancer treatment. These methods include, but are not limited to, intensity-modulated radiation therapy (IMRT), image-guided radiation therapy (IGRT), Stereotactic radiosurgery (SRS), Stereotactic body radiation therapy (SBRT), and proton therapy.


Intensity-modulated radiation therapy (IMRT) is an example of external-beam radiation and may use hundreds of tiny radiation beam-shaping devices, called collimators, to deliver a single dose of radiation. The collimators can be stationary or can move during treatment, allowing the intensity of the radiation beams to change during treatment sessions. This kind of dose modulation allows different areas of a tumor or nearby tissues to receive different doses of radiation. IMRT is planned in reverse (called inverse treatment planning). In inverse treatment planning, the radiation doses to different areas of the tumor and surrounding tissue are planned in advance, and then a high-powered computer program calculates the required number of beams and angles of the radiation treatment. In contrast, during traditional (forward) treatment planning, the number and angles of the radiation beams are chosen in advance and computers calculate how much dose may be delivered from each of the planned beams. The goal of IMRT is to increase the radiation dose to the areas that need it and reduce radiation exposure to specific sensitive areas of surrounding normal tissue.


Another example of external-beam radiation is image-guided radiation therepy (IGRT). In IGRT, repeated imaging scans (CT, MRI, or PET) may be performed during treatment. These imaging scans may be processed by computers to identify changes in a tumor's size and location due to treatment and to allow the position of the patient or the planned radiation dose to be adjusted during treatment as needed. Repeated imaging can increase the accuracy of radiation treatment and may allow reductions in the planned volume of tissue to be treated, thereby decreasing the total radiation dose to normal tissue.


Tomotherapy is a type of image-guided IMRT. A tomotherapy machine is a hybrid between a CT imaging scanner and an external-beam radiation therapy machine. The part of the tomotherapy machine that delivers radiation for both imaging and treatment can rotate completely around the patient in the same manner as a normal CT scanner. Tomotherapy machines can capture CT images of the patient's tumor immediately before treatment sessions, to allow for very precise tumor targeting and sparing of normal tissue.


Stereotactic radiosurgery (SRS) can deliver one or more high doses of radiation to a small tumor. SRS uses extremely accurate image-guided tumor targeting and patient positioning. Therefore, a high dose of radiation can be given without excess damage to normal tissue. SRS can be used to treat small tumors with well-defined edges. It is most commonly used in the treatment of brain or spinal tumors and brain metastases from other cancer types. For the treatment of some brain metastases, patients may receive radiation therapy to the entire brain (called whole-brain radiation therapy) in addition to SRS. SRS requires the use of a head frame or other device to immobilize the patient during treatment to ensure that the high dose of radiation is delivered accurately.


Stereotactic body radiation therapy (SBRT) delivers radiation therapy in fewer sessions, using smaller radiation fields and higher doses than 3D-CRT in most cases. SBRT may treat tumors that lie outside the brain and spinal cord. Because these tumors are more likely to move with the normal motion of the body, and therefore cannot be targeted as accurately as tumors within the brain or spine, SBRT is usually given in more than one dose. SBRT can be used to treat small, isolated tumors, including cancers in the lung and liver. SBRT systems may be known by their brand names, such as the CyberKnife®.


In proton therapy, external-beam radiation therapy may be delivered by proton. Protons are a type of charged particle. Proton beams differ from photon beams mainly in the way they deposit energy in living tissue. Whereas photons deposit energy in small packets all along their path through tissue, protons deposit much of their energy at the end of their path (called the Bragg peak) and deposit less energy along the way. Use of protons may reduce the exposure of normal tissue to radiation, possibly allowing the delivery of higher doses of radiation to a tumor.


Other charged particle beams such as electron beams may be used to irradiate superficial tumors, such as skin cancer or tumors near the surface of the body, but they cannot travel very far through tissue.


Internal radiation therapy (brachytherapy) is radiation delivered from radiation sources (radioactive materials) placed inside or on the body. Several brachytherapy techniques are used in cancer treatment. Interstitial brachytherapy may use a radiation source placed within tumor tissue, such as within a bladder tumor. Intracavitary brachytherapy may use a source placed within a surgical cavity or a body cavity, such as the chest cavity, near a tumor. Episcleral brachytherapy, which may be used to treat melanoma inside the eye, may use a source that is attached to the eye. In brachytherapy, radioactive isotopes can be sealed in tiny pellets or “seeds.” These seeds may be placed in patients using delivery devices, such as needles, catheters, or some other type of carrier. As the isotopes decay naturally, they give off radiation that may damage nearby cancer cells. Brachytherapy may be able to deliver higher doses of radiation to some cancers than external-beam radiation therapy while causing less damage to normal tissue.


Brachytherapy can be given as a low-dose-rate or a high-dose-rate treatment. In low-dose-rate treatment, cancer cells receive continuous low-dose radiation from the source over a period of several days. In high-dose-rate treatment, a robotic machine attached to delivery tubes placed inside the body may guide one or more radioactive sources into or near a tumor, and then removes the sources at the end of each treatment session. High-dose-rate treatment can be given in one or more treatment sessions. An example of a high-dose-rate treatment is the MammoSite® system. Bracytherapy may be used to treat patients with breast cancer who have undergone breast-conserving surgery.


The placement of brachytherapy sources can be temporary or permanent. For permament brachytherapy, the sources may be surgically sealed within the body and left there, even after all of the radiation has been given off. In some instances, the remaining material (in which the radioactive isotopes were sealed) does not cause any discomfort or harm to the patient. Permanent brachytherapy is a type of low-dose-rate brachytherapy. For temporary brachytherapy, tubes (catheters) or other carriers are used to deliver the radiation sources, and both the carriers and the radiation sources are removed after treatment. Temporary brachytherapy can be either low-dose-rate or high-dose-rate treatment. Brachytherapy may be used alone or in addition to external-beam radiation therapy to provide a “boost” of radiation to a tumor while sparing surrounding normal tissue.


In systemic radiation therapy, a patient may swallow or receive an injection of a radioactive substance, such as radioactive iodine or a radioactive substance bound to a monoclonal antibody. Radioactive iodine (1311) is a type of systemic radiation therapy commonly used to help treat cancer, such as thyroid cancer. Thyroid cells naturally take up radioactive iodine. For systemic radiation therapy for some other types of cancer, a monoclonal antibody may help target the radioactive substance to the right place. The antibody joined to the radioactive substance travels through the blood, locating and killing tumor cells. For example, the drug ibritumomab tiuxetan (Zevalin®) may be used for the treatment of certain types of B-cell non-Hodgkin lymphoma (NHL). The antibody part of this drug recognizes and binds to a protein found on the surface of B lymphocytes. The combination drug regimen of tositumomab and iodine 1131 tositumomab (Bexxar®) may be used for the treatment of certain types of cancer, such as NHL. In this regimen, nonradioactive tositumomab antibodies may be given to patients first, followed by treatment with tositumomab antibodies that have 1311 attached. Tositumomab may recognize and bind to the same protein on B lymphocytes as ibritumomab. The nonradioactive form of the antibody may help protect normal B lymphocytes from being damaged by radiation from 1311.


Some systemic radiation therapy drugs relieve pain from cancer that has spread to the bone (bone metastases). This is a type of palliative radiation therapy. The radioactive drugs samarium-153-lexidronam (Quadramet®) and strontium-89 chloride (Metastron®) are examples of radiopharmaceuticals may be used to treat pain from bone metastases.


In certain cases, radiation therapy is combined with a chemotherapeutic agent. Examples of chemotherapeutic agents which are used in combination with radiation to treat bladder cancer include Cisplatin; Cisplatin plus fluorouracil (5-FU); and Mitomycin with 5-FU.


Biological therapy (sometimes called immunotherapy, biotherapy, or biological response modifier (BRM) therapy) uses the body's immune system, either directly or indirectly, to fight cancer or to lessen the side effects that may be caused by some cancer treatments. Biological therapies include interferons, interleukins, colony-stimulating factors, monoclonal antibodies, vaccines, gene therapy, and nonspecific immunomodulating agents.


Interferons (IFNs) are types of cytokines that occur naturally in the body. Interferon alpha, interferon beta, and interferon gamma are examples of interferons that may be used in cancer treatment.


Like interferons, interleukins (ILs) are cytokines that occur naturally in the body and can be made in the laboratory. Many interleukins have been identified for the treatment of cancer. For example, interleukin-2 (IL-2 or aldesleukin), interleukin 7, and interleukin 12 have may be used as an anti-cancer treatment. IL-2 may stimulate the growth and activity of many immune cells, such as lymphocytes, that can destroy cancer cells. Interleukins may be used to treat a number of cancers, including leukemia, lymphoma, and brain, colorectal, ovarian, breast, kidney and bladder cancers.


Colony-stimulating factors (CSFs) (sometimes called hematopoietic growth factors) may also be used for the treatment of cancer. Some examples of CSFs include, but are not limited to, G-CSF (filgrastim) and GM-CSF (sargramostim). CSFs may promote the division of bone marrow stem cells and their development into white blood cells, platelets, and red blood cells. Bone marrow is critical to the body's immune system because it is the source of all blood cells. Because anticancer drugs can damage the body's ability to make white blood cells, red blood cells, and platelets, stimulation of the immune system by CSFs may benefit patients undergoing other anti-cancer treatment, thus CSFs may be combined with other anti-cancer therapies, such as chemotherapy. CSFs may be used to treat a large variety of cancers, including lymphoma, leukemia, multiple myeloma, melanoma, and cancers of the brain, lung, bladder, esophagus, breast, uterus, ovary, prostate, kidney, colon, and rectum.


Another type of biological therapy includes monoclonal antibodies (MOABs or MoABs). These antibodies may be produced by a single type of cell and may be specific for a particular antigen. To create MOABs, a human cancer cells may be injected into mice. In response, the mouse immune system can make antibodies against these cancer cells. The mouse plasma cells that produce antibodies may be isolated and fused with laboratory-grown cells to create “hybrid” cells called hybridomas. Hybridomas can indefinitely produce large quantities of these pure antibodies, or MOABs. MOABs may be used in cancer treatment in a number of ways. For instance, MOABs that react with specific types of cancer may enhance a patient's immune response to the cancer. MOABs can be programmed to act against cell growth factors, thus interfering with the growth of cancer cells.


MOABs may be linked to other anti-cancer therapies such as chemotherapeutics, radioisotopes (radioactive substances), other biological therapies, or other toxins. When the antibodies latch onto cancer cells, they deliver these anti-cancer therapies directly to the tumor, helping to destroy it. MOABs carrying radioisotopes may also prove useful in diagnosing certain cancers, such as bladder, colorectal, ovarian, and prostate.


Rituxan® (rituximab) and Herceptin® (trastuzumab) are examples of MOABs that may be used as a biological therapy. Rituxan may be used for the treatment of non-Hodgkin lymphoma. Herceptin can be used to treat metastatic breast cancer in patients with tumors that produce excess amounts of a protein called HER2. Alternatively, MOABs may be used to treat lymphoma, leukemia, melanoma, and cancers of the brain, breast, lung, kidney, colon, bladder, rectum, ovary, prostate, and other areas.


Cancer vaccines are another form of biological therapy. Cancer vaccines may be designed to encourage the patient's immune system to recognize cancer cells. Cancer vaccines may be designed to treat existing cancers (therapeutic vaccines) or to prevent the development of cancer (prophylactic vaccines). Therapeutic vaccines may be injected in a person after cancer is diagnosed. These vaccines may stop the growth of existing tumors, prevent cancer from recurring, or eliminate cancer cells not killed by prior treatments. Cancer vaccines given when the tumor is small may be able to eradicate the cancer. On the other hand, prophylactic vaccines are given to healthy individuals before cancer develops. These vaccines are designed to stimulate the immune system to attack viruses that can cause cancer. By targeting these cancer-causing viruses, development of certain cancers may be prevented. For example, cervarix and gardasil are vaccines to treat human papilloma virus and may prevent cervical cancer. Therapeutic vaccines may be used to treat melanoma, lymphoma, leukemia, and cancers of the brain, breast, lung, kidney, ovary, prostate, pancreas, bladder, colon, and rectum. Cancer vaccines can be used in combination with other anti-cancer therapies.


Gene therapy is another example of a biological therapy. Gene therapy may involve introducing genetic material into a person's cells to fight disease. Gene therapy methods may improve a patient's immune response to cancer. For example, a gene may be inserted into an immune cell to enhance its ability to recognize and attack cancer cells. In another approach, cancer cells may be injected with genes that cause the cancer cells to produce cytokines and stimulate the immune system.


In some instances, biological therapy includes nonspecific immunomodulating agents. Nonspecific immunomodulating agents are substances that stimulate or indirectly augment the immune system. Often, these agents target key immune system cells and may cause secondary responses such as increased production of cytokines and immunoglobulins. Two nonspecific immunomodulating agents used in cancer treatment are bacillus Calmette-Guerin (BCG) and levamisole. BCG may be used in the treatment of superficial bladder cancer following surgery. BCG may work by stimulating an inflammatory, and possibly an immune, response. A solution of BCG may be instilled in the bladder. Levamisole is sometimes used along with fluorouracil (5-FU) chemotherapy in the treatment of stage III (Dukes' C) colon cancer following surgery. Levamisole may act to restore depressed immune function.


Photodynamic therapy (PDT) is an anti-cancer treatment that may use a drug, called a photosensitizer or photosensitizing agent, and a particular type of light. When photosensitizers are exposed to a specific wavelength of light, they may produce a form of oxygen that kills nearby cells. A photosensitizer may be activated by light of a specific wavelength. This wavelength determines how far the light can travel into the body. Thus, photosensitizers and wavelengths of light may be used to treat different areas of the body with PDT.


In the first step of PDT for cancer treatment, a photosensitizing agent may be injected into the bloodstream. The agent may be absorbed by cells all over the body but may stay in cancer cells longer than it does in normal cells. Approximately 24 to 72 hours after injection, when most of the agent has left normal cells but remains in cancer cells, the tumor can be exposed to light. The photosensitizer in the tumor can absorb the light and produces an active form of oxygen that destroys nearby cancer cells. In addition to directly killing cancer cells, PDT may shrink or destroy tumors in two other ways. The photosensitizer can damage blood vessels in the tumor, thereby preventing the cancer from receiving necessary nutrients. PDT may also activate the immune system to attack the tumor cells.


The light used for PDT can come from a laser or other sources. Laser light can be directed through fiber optic cables (thin fibers that transmit light) to deliver light to areas inside the body. For example, a fiber optic cable can be inserted through an endoscope (a thin, lighted tube used to look at tissues inside the body) into the lungs or esophagus to treat cancer in these organs. Other light sources include light-emitting diodes (LEDs), which may be used for surface tumors, such as skin cancer. PDT is usually performed as an outpatient procedure. PDT may also be repeated and may be used with other therapies, such as surgery, radiation, or chemotherapy.


Extracorporeal photopheresis (ECP) is a type of PDT in which a machine may be used to collect the patient's blood cells. The patient's blood cells may be treated outside the body with a photosensitizing agent, exposed to light, and then returned to the patient. ECP may be used to help lessen the severity of skin symptoms of cutaneous T-cell lymphoma that has not responded to other therapies. ECP may be used to treat other blood cancers, and may also help reduce rejection after transplants.


Additionally, photosensitizing agent, such as porfimer sodium or Photofrin®, may be used in PDT to treat or relieve the symptoms of esophageal cancer and non-small cell lung cancer. Porfimer sodium may relieve symptoms of esophageal cancer when the cancer obstructs the esophagus or when the cancer cannot be satisfactorily treated with laser therapy alone. Porfimer sodium may be used to treat non-small cell lung cancer in patients for whom the usual treatments are not appropriate, and to relieve symptoms in patients with non-small cell lung cancer that obstructs the airways. Porfimer sodium may also be used for the treatment of precancerous lesions in patients with Barrett esophagus, a condition that can lead to esophageal cancer.


Laser therapy may use high-intensity light to treat cancer and other illnesses. Lasers can be used to shrink or destroy tumors or precancerous growths. Lasers are most commonly used to treat superficial cancers (cancers on the surface of the body or the lining of internal organs) such as basal cell skin cancer and the very early stages of some cancers, such as cervical, penile, vaginal, vulvar, and non-small cell lung cancer.


Lasers may also be used to relieve certain symptoms of cancer, such as bleeding or obstruction. For example, lasers can be used to shrink or destroy a tumor that is blocking a patient's trachea (windpipe) or esophagus. Lasers also can be used to remove colon polyps or tumors that are blocking the colon or stomach.


Laser therapy is often given through a flexible endoscope (a thin, lighted tube used to look at tissues inside the body). The endoscope is fitted with optical fibers (thin fibers that transmit light). It is inserted through an opening in the body, such as the mouth, nose, anus, or vagina. Laser light is then precisely aimed to cut or destroy a tumor.


Laser-induced interstitial thermotherapy (LITT), or interstitial laser photocoagulation, also uses lasers to treat some cancers. LITT is similar to a cancer treatment called hyperthermia, which uses heat to shrink tumors by damaging or killing cancer cells. During LITT, an optical fiber is inserted into a tumor. Laser light at the tip of the fiber raises the temperature of the tumor cells and damages or destroys them. LITT is sometimes used to shrink tumors in the liver.


Laser therapy can be used alone, but most often it is combined with other treatments, such as surgery, chemotherapy, or radiation therapy. In addition, lasers can seal nerve endings to reduce pain after surgery and seal lymph vessels to reduce swelling and limit the spread of tumor cells.


Lasers used to treat cancer may include carbon dioxide (CO2) lasers, argon lasers, and neodymium:yttrium-aluminum-garnet (Nd:YAG) lasers. Each of these can shrink or destroy tumors and can be used with endoscopes. CO2 and argon lasers can cut the skin's surface without going into deeper layers. Thus, they can be used to remove superficial cancers, such as skin cancer. In contrast, the Nd:YAG laser is more commonly applied through an endoscope to treat internal organs, such as the uterus, esophagus, and colon. Nd:YAG laser light can also travel through optical fibers into specific areas of the body during LITT. Argon lasers are often used to activate the drugs used in PDT.


Target sequences can be grouped so that information obtained about the set of target sequences in the group can be used to make or assist in making a clinically relevant judgment such as a diagnosis, prognosis, or treatment choice.


A patient report is also provided comprising a representation of measured expression levels of a plurality of target sequences in a biological sample from the patient, wherein the representation comprises expression levels of target sequences corresponding to any one, two, three, four, five, six, eight, ten, twenty, thirty, fifty or more of the target sequences corresponding to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440, the subsets described herein, or a combination thereof. A patient report is also provided comprising a representation of measured expression levels of a plurality of target sequences in a biological sample from the patient, wherein the representation comprises expression levels of target sequences corresponding to 40, 50, 60, 70, 80, 90, 100 or more of the target sequences corresponding to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440, the subsets described herein, or a combination thereof. or more coding targets and/or non-coding targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. A patient report is also provided comprising a representation of measured expression levels of a plurality of target sequences in a biological sample from the patient, wherein the representation comprises expression levels of target sequences corresponding to 100, 125, 150, 175, 200, 225, 250, 275, 300 or more of the target sequences corresponding to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440, the subsets described herein, or a combination thereof. A patient report is also provided comprising a representation of measured expression levels of a plurality of target sequences in a biological sample from the patient, wherein the representation comprises expression levels of target sequences corresponding to 300, 325, 350, 375, 400, 425, 450, 475, 500, 525, 550, 575, 600 or more of the target sequences corresponding to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440, the subsets described herein, or a combination thereof. A patient report is also provided comprising a representation of measured expression levels of a plurality of target sequences in a biological sample from the patient, wherein the representation comprises expression levels of target sequences corresponding to 600, 625, 650, 675, 700, 725, 750, 775, 800, 825, 850 or more of the target sequences corresponding to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440, the subsets described herein, or a combination thereof. In some embodiments, the representation of the measured expression level(s) may take the form of a linear or nonlinear combination of expression levels of the target sequences of interest. The patient report may be provided in a machine (e.g., a computer) readable format and/or in a hard (paper) copy. The report can also include standard measurements of expression levels of said plurality of target sequences from one or more sets of patients with known disease status and/or outcome. The report can be used to inform the patient and/or treating physician of the expression levels of the expressed target sequences, the likely medical diagnosis and/or implications, and optionally may recommend a treatment modality for the patient.


Also provided are representations of the gene expression profiles useful for treating, diagnosing, prognosticating, and otherwise assessing disease. In some embodiments, these profile representations are reduced to a medium that can be automatically read by a machine such as computer readable media (magnetic, optical, and the like). The articles can also include instructions for assessing the gene expression profiles in such media. For example, the articles may comprise a readable storage form having computer instructions for comparing gene expression profiles of the portfolios of genes described above. The articles may also have gene expression profiles digitally recorded therein so that they may be compared with gene expression data from patient samples. Alternatively, the profiles can be recorded in different representational format. A graphical recordation is one such format. Clustering algorithms can assist in the visualization of such data.


EXEMPLARY EMBODIMENTS

Disclosed herein, in some embodiments, is a method for diagnosing, predicting, and/or monitoring a status or outcome of a cancer a subject, comprising: (a) assaying an expression level of a plurality of targets in a sample from the subject, wherein at least one target of the plurality of targets is selected from the group consisting of targets identified in Table 1; and (b) for diagnosing, predicting, and/or monitoring a status or outcome of a cancer based on the expression levels of the plurality of targets. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the cancer is a prostate cancer. In some embodiments, the cancer is a pancreatic cancer. In some embodiments, the cancer is a thyroid cancer. In some embodiments, the cancer is a bladder cancer. In some embodiments, the cancer is a lung cancer. In some embodiments, the method further comprises assaying an expression level of a coding target. In some instances, the coding target is selected from the group consisting of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the coding target is an exon-coding transcript. In some embodiments, the exon-coding transcript is an exonic sequence. In some embodiments, the method further comprises assaying an expression level of a non-coding target. In some instances, the non-coding target is selected from the group consisting of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the non-coding target is a non-coding transcript. In other instances, the non-coding target is an intronic sequence. In other instances, the non-coding target is an intergenic sequence. In some instances, the non-coding target is a UTR sequence. In other instances, the non-coding target is a non-coding RNA transcript. In some embodiments, the target comprises a nucleic acid sequence. In some embodiments, the nucleic acid sequence is a DNA sequence. In some embodiments, the nucleic acid sequence is an RNA sequence. In other instances, the target comprises a polypeptide sequence. In some instances, the plurality of targets comprises 2 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 5 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 10 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 15 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 20 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 25 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 30 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 35 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 40 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, assaying the expression level comprises detecting and/or quantifying a nucleotide sequence of the plurality of targets. Alternatively, assaying the expression level comprises detecting and/or quantifying a polypeptide sequence of the plurality of targets. In some embodiments, assaying the expression level comprises detecting and/or quantifying the DNA levels of the plurality of targets. In some embodiments, assaying the expression level comprises detecting and/or quantifying the RNA or mRNA levels of the plurality of targets. In some embodiments, assaying the expression level comprises detecting and/or quantifying the protein level of the plurality of targets. In some embodiments, the diagnosing, predicting, and/or monitoring the status or outcome of a cancer comprises determining the malignancy of the cancer. In some embodiments, the diagnosing, predicting, and/or monitoring the status or outcome of a cancer includes determining the stage of the cancer. In some embodiments, the diagnosing, predicting, and/or monitoring the status or outcome of a cancer includes assessing the risk of cancer recurrence. In some embodiments, diagnosing, predicting, and/or monitoring the status or outcome of a cancer may comprise determining the efficacy of treatment. In some embodiments, diagnosing, predicting, and/or monitoring the status or outcome of a cancer may comprise determining a therapeutic regimen. Determining a therapeutic regimen may comprise administering an anti-cancer therapeutic. Alternatively, determining the treatment for the cancer may comprise modifying a therapeutic regimen. Modifying a therapeutic regimen may comprise increasing, decreasing, or terminating a therapeutic regimen.


Further disclosed, in some embodiments, is method for determining a treatment for a cancer in a subject, comprising: a) assaying an expression level of a plurality of targets in a sample from the subject, wherein at least one target of the plurality of targets is selected from the group consisting of targets identified in Table 1; and b) determining the treatment for a cancer based on the expression levels of the plurality of targets. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the cancer is a prostate cancer. In some embodiments, the cancer is a pancreatic cancer. In some embodiments, the cancer is a bladder cancer. In some embodiments, the cancer is a thyroid cancer. In some embodiments, the cancer is a lung cancer. In some embodiments, the coding target is selected from a sequence listed in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the method further comprises assaying an expression level of a coding target. In some instances, the coding target is selected from the group consisting of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the coding target is an exon-coding transcript. In some embodiments, the exon-coding transcript is an exonic sequence. In some embodiments, the method further comprises assaying an expression level of a non-coding target. In some instances, the non-coding target is selected from the group consisting of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the non-coding target is a non-coding transcript. In other instances, the non-coding target is an intronic sequence. In other instances, the non-coding target is an intergenic sequence. In some instances, the non-coding target is a UTR sequence. In other instances, the non-coding target is a non-coding RNA transcript. In some embodiments, the target comprises a nucleic acid sequence. In some embodiments, the nucleic acid sequence is a DNA sequence. In some embodiments, the nucleic acid sequence is an RNA sequence. In other instances, the target comprises a polypeptide sequence. In some instances, the plurality of targets comprises 2 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 5 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 10 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 15 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 20 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 25 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 30 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 35 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 40 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, assaying the expression level comprises detecting and/or quantifying a nucleotide sequence of the plurality of targets. In some embodiments, determining the treatment for the cancer includes determining the efficacy of treatment. Determining the treatment for the cancer may comprise administering an anti-cancer therapeutic. Alternatively, determining the treatment for the cancer may comprise modifying a therapeutic regimen. Modifying a therapeutic regimen may comprise increasing, decreasing, or terminating a therapeutic regimen.


The methods use the probe sets, probes and primers described herein to provide expression signatures or profiles from a test sample derived from a subject having or suspected of having cancer. In some embodiments, such methods involve contacting a test sample with a probe set comprising a plurality of probes under conditions that permit hybridization of the probe(s) to any target nucleic acid(s) present in the test sample and then detecting any probe:target duplexes formed as an indication of the presence of the target nucleic acid in the sample. Expression patterns thus determined are then compared to one or more reference profiles or signatures. Optionally, the expression pattern can be normalized. The methods use the probe sets, probes and primers described herein to provide expression signatures or profiles from a test sample derived from a subject to classify the cancer as recurrent or non-recurrent.


In some embodiments, such methods involve the specific amplification of target sequences nucleic acid(s) present in the test sample using methods known in the art to generate an expression profile or signature which is then compared to a reference profile or signature.


In some embodiments, the invention further provides for prognosing patient outcome, predicting likelihood of recurrence after cystectomy and/or for designating treatment modalities.


In one embodiment, the methods generate expression profiles or signatures detailing the expression of the target sequences having altered relative expression with different cancer outcomes. In some embodiments, the methods detect combinations of expression levels of sequences exhibiting positive and negative correlation with a disease status. In one embodiment, the methods detect a minimal expression signature.


The gene expression profiles of each of the target sequences comprising the portfolio can fixed in a medium such as a computer readable medium. This can take a number of forms. For example, a table can be established into which the range of signals (e.g., intensity measurements) indicative of disease or outcome is input. Actual patient data can then be compared to the values in the table to determine the patient samples diagnosis or prognosis. In a more sophisticated embodiment, patterns of the expression signals (e.g., fluorescent intensity) are recorded digitally or graphically.


The expression profiles of the samples can be compared to a control portfolio. The expression profiles can be used to diagnose, predict, or monitor a status or outcome of a cancer. For example, diagnosing, predicting, or monitoring a status or outcome of a cancer may comprise diagnosing or detecting a cancer, cancer metastasis, or stage of a cancer. In other instances, diagnosing, predicting, or monitoring a status or outcome of a cancer may comprise predicting the risk of cancer recurrence. Alternatively, diagnosing, predicting, or monitoring a status or outcome of a cancer may comprise predicting mortality or morbidity.


Further disclosed herein are methods for characterizing a patient population. Generally, the method comprises: (a) providing a sample from a subject; (b) assaying the expression level for a plurality of targets in the sample; and (c) characterizing the subject based on the expression level of the plurality of targets. In some embodiments, the method further comprises assaying an expression level of a coding target. In some instances, the coding target is selected from the group consisting of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the coding target is an exon-coding transcript. In some embodiments, the exon-coding transcript is an exonic sequence. In some embodiments, the method further comprises assaying an expression level of a non-coding target. In some instances, the non-coding target is selected from the group consisting of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the non-coding target is a non-coding transcript. In other instances, the non-coding target is an intronic sequence. In other instances, the non-coding target is an intergenic sequence. In some instances, the non-coding target is a UTR sequence. In other instances, the non-coding target is a non-coding RNA transcript. In some embodiments, the target comprises a nucleic acid sequence. In some embodiments, the nucleic acid sequence is a DNA sequence. In some embodiments, the nucleic acid sequence is an RNA sequence. In other instances, the target comprises a polypeptide sequence. In some instances, the plurality of targets comprises 2 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 5 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 10 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 15 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 20 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 25 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 30 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 35 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 40 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, assaying the expression level comprises detecting and/or quantifying a nucleotide sequence of the plurality of targets. In some instances, the method may further comprise diagnosing a cancer in the subject. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the cancer is a prostate cancer. In some embodiments, the cancer is a pancreatic cancer. In some embodiments, the cancer is a bladder cancer. In some embodiments, the cancer is a thyroid cancer. In some embodiments, the cancer is a lung cancer. In some instances, characterizing the subject comprises determining whether the subject would respond to an anti-cancer therapy. Alternatively, characterizing the subject comprises identifying the subject as a non-responder to an anti-cancer therapy. Optionally, characterizing the subject comprises identifying the subject as a responder to an anti-cancer therapy.


Further disclosed herein are methods for selecting a subject suffering from a cancer for enrollment into a clinical trial. Generally, the method comprises: (a) providing a sample from a subject; (b) assaying the expression level for a plurality of targets in the sample; and (c) characterizing the subject based on the expression level of the plurality of targets. In some embodiments, the method further comprises assaying an expression level of a coding target. In some instances, the coding target is selected from the group consisting of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the coding target is an exon-coding transcript. In some embodiments, the exon-coding transcript is an exonic sequence. In some embodiments, the method further comprises assaying an expression level of a non-coding target. In some instances, the non-coding target is selected from the group consisting of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the non-coding target is a non-coding transcript. In other instances, the non-coding target is an intronic sequence. In other instances, the non-coding target is an intergenic sequence. In some instances, the non-coding target is a UTR sequence. In other instances, the non-coding target is a non-coding RNA transcript. In some embodiments, the target comprises a nucleic acid sequence. In some embodiments, the nucleic acid sequence is a DNA sequence. In some embodiments, the nucleic acid sequence is an RNA sequence. In other instances, the target comprises a polypeptide sequence. In some instances, the plurality of targets comprises 2 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 5 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 10 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 15 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 20 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 25 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 30 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 35 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some instances, the plurality of targets comprises 40 or more targets selected from the group of targets identified in Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, assaying the expression level comprises detecting and/or quantifying a nucleotide sequence of the plurality of targets. In some instances, the method may further comprise diagnosing a cancer in the subject. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the bladder cancer is non-invasive bladder cancer, muscle-invasive bladder cancer, or advanced bladder cancer. In some embodiments, the cancer is a prostate cancer. In some embodiments, the cancer is a pancreatic cancer. In some embodiments, the cancer is a bladder cancer. In some embodiments, the cancer is a thyroid cancer. In some embodiments, the cancer is a lung cancer. In some instances, characterizing the subject comprises determining whether the subject would respond to an anti-cancer therapy. Alternatively, characterizing the subject comprises identifying the subject as a non-responder to an anti-cancer therapy. Optionally, characterizing the subject comprises identifying the subject as a responder to an anti-cancer therapy.


(Further disclosed herein is a method of analyzing a cancer in an individual in need thereof, comprising (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; and (b) comparing the expression profile from the sample to an expression profile of a control or standard. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, wherein the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the method further comprises a software module executed by a computer-processing device to compare the expression profiles. In some embodiments, the method further comprises providing diagnostic or prognostic information to the individual about the cardiovascular disorder based on the comparison. In some embodiments, the method further comprises diagnosing the individual with a cancer if the expression profile of the sample (a) deviates from the control or standard from a healthy individual or population of healthy individuals, or (b) matches the control or standard from an individual or population of individuals who have or have had the cancer. In some embodiments, the method further comprises predicting the susceptibility of the individual for developing a cancer based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the method further comprises prescribing a treatment regimen based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the method further comprises altering a treatment regimen prescribed or administered to the individual based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the method further comprises predicting the individual's response to a treatment regimen based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the deviation is the expression level of one or more targets from the sample is greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the method further comprises using a machine to isolate the target or the probe from the sample. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to a target selected from Table 2B, Table 16 or SEQ ID NOs: 1-1440 or a combination thereof. In some embodiments, the method further comprises amplifying the target, the probe, or any combination thereof. In some embodiments, the method further comprises sequencing the target, the probe, or any combination thereof. In some embodiments, the method further comprises converting the expression levels of the target sequences into a likelihood score that indicates the probability that a biological sample is from a patient who will exhibit no evidence of disease, who will exhibit systemic cancer, or who will exhibit biochemical recurrence. In some embodiments, the target sequences are differentially expressed the cancer. In some embodiments, the differential expression is dependent on aggressiveness. In some embodiments, the expression profile is determined by a method selected from the group consisting of RT-PCR, Northern blotting, ligase chain reaction, array hybridization, and a combination thereof.


Also disclosed herein is a method of diagnosing cancer in an individual in need thereof, comprising (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; (b) comparing the expression profile from the sample to an expression profile of a control or standard; and (c) diagnosing a cancer in the individual if the expression profile of the sample (i) deviates from the control or standard from a healthy individual or population of healthy individuals, or (ii) matches the control or standard from an individual or population of individuals who have or have had the cancer. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, wherein the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the method further comprises a software module executed by a computer-processing device to compare the expression profiles. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the method further comprises using a machine to isolate the target or the probe from the sample. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the method further comprises amplifying the target, the probe, or any combination thereof. In some embodiments, the method further comprises sequencing the target, the probe, or any combination thereof. In some embodiments, the method further comprises converting the expression levels of the target sequences into a likelihood score that indicates the probability that a biological sample is from a patient who will exhibit no evidence of disease, who will exhibit systemic cancer, or who will exhibit biochemical recurrence. In some embodiments, the target sequences are differentially expressed the cancer. In some embodiments, the differential expression is dependent on aggressiveness. In some embodiments, the expression profile is determined by a method selected from the group consisting of RT-PCR, Northern blotting, ligase chain reaction, array hybridization, and a combination thereof.


In some embodiments is a method of predicting whether an individual is susceptible to developing a cancer, comprising (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 1; (b) comparing the expression profile from the sample to an expression profile of a control or standard; and (c) predicting the susceptibility of the individual for developing a cancer based on (i) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (ii) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, wherein the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the method further comprises a software module executed by a computer-processing device to compare the expression profiles. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the method further comprises using a machine to isolate the target or the probe from the sample. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the method further comprises amplifying the target, the probe, or any combination thereof. In some embodiments, the method further comprises sequencing the target, the probe, or any combination thereof. In some embodiments, the method further comprises converting the expression levels of the target sequences into a likelihood score that indicates the probability that a biological sample is from a patient who will exhibit no evidence of disease, who will exhibit systemic cancer, or who will exhibit biochemical recurrence. In some embodiments, the target sequences are differentially expressed the cancer. In some embodiments, the differential expression is dependent on aggressiveness. In some embodiments, the expression profile is determined by a method selected from the group consisting of RT-PCR, Northern blotting, ligase chain reaction, array hybridization, and a combination thereof.


In some embodiments is a method of predicting an individual's response to a treatment regimen for a cancer, comprising: (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; (b) comparing the expression profile from the sample to an expression profile of a control or standard; and (c) predicting the individual's response to a treatment regimen based on (i) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (ii) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, wherein the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the method further comprises a software module executed by a computer-processing device to compare the expression profiles. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the method further comprises using a machine to isolate the target or the probe from the sample. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the method further comprises amplifying the target, the probe, or any combination thereof. In some embodiments, the method further comprises sequencing the target, the probe, or any combination thereof. In some embodiments, the method further comprises converting the expression levels of the target sequences into a likelihood score that indicates the probability that a biological sample is from a patient who will exhibit no evidence of disease, who will exhibit systemic cancer, or who will exhibit biochemical recurrence. In some embodiments, the target sequences are differentially expressed the cancer. In some embodiments, the differential expression is dependent on aggressiveness. In some embodiments, the expression profile is determined by a method selected from the group consisting of RT-PCR, Northern blotting, ligase chain reaction, array hybridization, and a combination thereof.


A method of prescribing a treatment regimen for a cancer to an individual in need thereof, comprising (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; (b) comparing the expression profile from the sample to an expression profile of a control or standard; and (c) prescribing a treatment regimen based on (i) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (ii) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas. In some embodiments, the method further comprises a software module executed by a computer-processing device to compare the expression profiles. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the deviation is the expression level of one or more targets from the sample is at least about 30% less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals. In some embodiments, the method further comprises using a machine to isolate the target or the probe from the sample. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof. In some embodiments, the method further comprises contacting the sample with a label that specifically binds to a target selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the method further comprises amplifying the target, the probe, or any combination thereof. In some embodiments, the method further comprises sequencing the target, the probe, or any combination thereof. In some embodiments, the method further comprises converting the expression levels of the target sequences into a likelihood score that indicates the probability that a biological sample is from a patient who will exhibit no evidence of disease, who will exhibit systemic cancer, or who will exhibit biochemical recurrence. In some embodiments, the target sequences are differentially expressed the cancer. In some embodiments, the differential expression is dependent on aggressiveness. In some embodiments, the expression profile is determined by a method selected from the group consisting of RT-PCR, Northern blotting, ligase chain reaction, array hybridization, and a combination thereof.


Further disclosed herein is a kit for analyzing a cancer, comprising (a) a probe set comprising a plurality of target sequences, wherein the plurality of target sequences comprises at least one target sequence listed in Table 2B, Table 16 or SEQ ID NOs:1-1440; and (b) a computer model or algorithm for analyzing an expression level and/or expression profile of the target sequences in a sample. In some embodiments, the kit further comprises a computer model or algorithm for correlating the expression level or expression profile with disease state or outcome. In some embodiments, the kit further comprises a computer model or algorithm for designating a treatment modality for the individual. In some embodiments, the kit further comprises a computer model or algorithm for normalizing expression level or expression profile of the target sequences. In some embodiments, the kit further comprises a computer model or algorithm comprising a robust multichip average (RMA), frozen robust multichip average (fRMA), Single Channel Array Normalization (SCAN), ComBat (Combining Batches of gene expression), probe logarithmic intensity error estimation (PLIER), non-linear fit (NLFIT) quantile-based, nonlinear normalization, or a combination thereof. In some embodiments, the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas.


Further disclosed herein is a system for analyzing a cancer, comprising (a) one or more probe sets comprising a plurality of target sequences, wherein (i) the plurality of target sequences hybridizes to one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; or (ii) the plurality of target sequences comprises one or more target sequences selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; and (b) a computer model or algorithm for analyzing an expression level and/or expression profile of the target hybridized to the probe in a sample from a subject suffering from a cancer. In some embodiments, the system further comprises electronic memory for capturing and storing an expression profile. In some embodiments, the system further comprises a computer-processing device, optionally connected to a computer network. In some embodiments, the system further comprises a software module executed by the computer-processing device to analyze an expression profile. In some embodiments, the system further comprises a software module executed by the computer-processing device to compare the expression profile to a standard or control. In some embodiments, the system further comprises a software module executed by the computer-processing device to determine the expression level of the target. In some embodiments, the system further comprises a machine to isolate the target or the probe from the sample. In some embodiments, the system further comprises a machine to sequence the target or the probe. In some embodiments, the system further comprises a machine to amplify the target or the probe. In some embodiments, the system further comprises a label that specifically binds to the target, the probe, or a combination thereof. In some embodiments, the system further comprises a software module executed by the computer-processing device to transmit an analysis of the expression profile to the individual or a medical professional treating the individual. In some embodiments, the system further comprises a software module executed by the computer-processing device to transmit a diagnosis or prognosis to the individual or a medical professional treating the individual. In some embodiments, the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the plurality of targets comprises at least 20 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440. In some embodiments, the cancer is selected from the group consisting of a carcinoma, sarcoma, leukemia, lymphoma, myeloma, and a CNS tumor. In some embodiments, the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas.


EXAMPLES
Example 1
A 15 Marker Genomic Classifier Predicts Risk for Recurrence After Cystectomy in

Muscle Invasive Bladder Cancer Patients.


A 15-marker genomic classifier containing biologically relevant RNA sequences using FFPE tumor tissue specimens obtained from a large cohort of patients who underwent radical cystectomy for muscle invasive bladder cancer was developed as follows. Bladder cancer patients who underwent radical cystectomy with curative intent formed the primary source of study material. From this population, a representative set of 225 patients with organ-confined, muscle-invasive (pT2N0M0), extravesical (pT3-4aN0M0), and node-positive (pTanyN1-3M0) UCB was identified. Each patient had a minimum post-cystectomy follow-up of two years unless they died of UCB prior to that date. Two-thirds of the cohort of 225 patients were assigned to a discovery set and the balance one-third to a validation set. The clinical end-point used to select discover biomarkers was recurrence-free survival (RFS) duration.


Specimen Processing and Initial Microarray Analysis.

Archival formalin-fixed paraffin-embedded (FFPE) primary tumor specimens of the 225 study patients were obtained for histopathological re-review. Hematoxylin/eosin-stained sections were used to guide tumor specimen selection using a 1 mm diameter core tissue microarray punch tool (Beecher Instruments, Sun Prairie, Wis.). Total RNA was extracted and purified using RNeasy FFPE kit (Qiagen, Valencia, Calif.). RNA was amplified and labeled using the Ovation WTA FFPE system (NuGen, San Carlos, Calif.) and hybridized to Human Exon 1.0 ST microarrays (Affymetrix, Santa Clara, Calif.) according to the manufacturer's recommendations. Human Exon GeneChips profile coding and non-coding regions of the entire human transcriptome using probe selection regions (PSRs), hereinafter referred to as features.


Patient Cohorts, Classifier Development and Application

Samples from 199 (88.4%) patient specimens passed microarray quality control. To identify features most clinically relevant to RFS, area under the receiver-operating characteristic (ROC) curve, t-test statistics and median fold difference (MFD) were calculated in the discovery cohort. Based on these metrics, features were filtered by area under ROC curve (AUC) >0.6, unadjusted t-test P<0.050 and MFD>1.5. Selected features were combined to produce a genomic classifier (GC) score using a random forest algorithm with 50,000 trees based on the discovery set. Each tree generated by the random forest algorithm was based on a bootstrapped subset of the discovery set. In each bootstrapping iteration, an “out-of-bag” subset of patients was excluded from the creation of the decision tree. The out-of-bag error rate was estimated based on the misclassification rate of this group. The selection of random forest mtry and nodesize parameters was based on minimizing the out-of-bag error rate. The GC outputs a continuous score between 0 and 1, with higher scores indicating higher probability of recurrence.


The prognostic ability of GC was benchmarked against two clinical nomograms: the International Bladder Cancer Nomogram Consortium (IBCNC) (Bochner et al. 2006) and an in-house “clinical-only” classifier (CC). The latter was developed on the discovery set and incorporated age, gender, pathological stage, and lymphovascular invasion status modeled using logistic regression. Additionally, to evaluate the joint prognostic value of genomic information and clinicopathologic variables, GC was combined with IBCNC and CC by logistic regression in the discovery set into integrated G-IBCNC and G-CC, respectively. Analogous to GC, patients were scored using the above classifiers between 0 and 1. For CC and G-CC, interactions between different clinicopathologic factors were explored in the discovery cohort and applied to the model when significant. The locked genomic, clinical and genomic-clinical models were then applied to patients in the validation cohort in a blinded fashion.


Statistical Analyses


Univariable prognostic abilities of classifiers were compared using discrimination boxplots, Wilcoxon rank-sum test and logistic regression. Cumulative incidence curves for RFS were constructed using Fine-Gray competing risks analysis. (Fine and Gray 1999) Deaths were considered a competing risk. Concordance summary index, an extension of AUC for censored data, was also used to compare performance of genomic classifiers, external signatures and clinical nomograms with respect to RFS. For the analyses where GC was categorized, majority rule criterion with classifier scores of >0.5 and ≦0.5 grouped as high-risk and low-risk, respectively was used. Analyses were performed using R v2.15.2. All tests were two-sided with type I error probability of 5%.


Time-dependent survival ROC curves were evaluated for prediction of recurrence within four years post-cystectomy. (Heagerty et al. 2000) For survival ROC, the nearest-neighbor estimator with λ=0.002 was used to approximate survival function density. The 95% confidence intervals (Cis) for survival-ROC AUCs were approximated through bootstrapping. Decision curve analyses were used to assess the net clinical benefit of genomic versus clinical models across different threshold probabilities. (Vickers and Elkin 2006). Reassignment of patients to risk strata based on addition of genomic information was assessed using reclassification plots. (Pepe 2011).


Importance of genomic-based classifiers relative to individual and combined clinical information, and their independent prognostic abilities were evaluated by multivariable Cox regression models. Proportional hazards assumptions of the Cox model were confirmed by evaluating the scaled Schoenfeld residuals. (Grambsch and Therneau 1994). For univariable and multivariable analyses, classifier scores were assessed as continuous variables (step size=0.1) unless dichotomization was required. For the analyses where GC was categorized, majority rule criterion with classifier scores of >0.5 and ≦0.5 grouped as high-risk and low-risk, respectively was used. Estimates of censoring distribution were used to calculate follow-up duration. (Korn 1986).


Analysis of Biological Interactions Between Prognostic Markers

To understand the biological interactions of constituent markers within GC, first-degree partners of their respective genes were extracted using the Human Signaling Network v5, a curated database with nearly 63,000 directed and undirected interactions between approximately 6,300 proteins. (Cui et al. 2007) Database for Annotation, Visualization and Integrated Discovery (DAVID) v6.7 was used to assess biological processes, molecular functions and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways of the gene network. (Kanehisa et al. 2004; Huang et al. 2009b; Huang et al. 2009a) Enriched processes, molecular functions or KEGG pathways with Benjamini-Hochberg-corrected P<0.05 were selected. (Benjamini and Hochberg 1995) Enrichment Map, a network-based gene set enrichment visualization method implemented as a Cytoscape plugin, was used to visualize the highly enriched biological concepts and group similar terms together. (Merico et al. 2010) Nodes in the Enrichment Map represent individual Gene Ontology (GO) terms or KEGG pathways and lines represent the amount of overlap between the terms.


Discovery and Initial Performance of Genomic-Based Classifiers

To test the hypothesis that risk prediction models incorporating genomic expression signatures which may better characterize the biology that determines the propensity of tumor recurrence post-cystectomy than clinical variables alone, a genomic classifier (GC) was developed and tested on the discovery set. Clinical characteristics of the cohort of patients analyzed are listed in Table 1. Median patient age was 68.5 (IQR: 63.6-75.6) years. Median follow-up was 9.2 years; 68 (51.1%) patients recurred and 77 (57.9%) patients were dead at last follow-up.


Expressions of nearly 1.4 million RNA features in tumors of patients who recurred were compared to those who remained recurrence-free at last follow-up. Following normalization and feature selection, 15 markers were identified corresponding to RNAs from protein-coding and non-coding regions of the genome that were differentially expressed based on recurrence (Table 2A, Table 2B). A random forest machine-learning algorithm assembled these markers into a GC that assigned a score to each patient. GC performance was compared to that of individual clinicopathologic variables, the IBCNC postoperative nomogram, (Bochner et al. 2006) and a clinical-only classifier (CC) that represented an optimized clinicopathologic prognostic model developed on the discovery set.


GC had an AUC of 0.88 (95% CI: 0.81-0.93) in the discovery set, with ENAH being the most prognostic individual marker within the signature (AUC=0.66). The performance of GC was higher than any individual clinicopathologic variable such as tumor and nodal stages, and lymphovascular invasion status (FIG. 1). The IBCNC and CC clinical risk prediction models had AUCs of 0.73 and 0.81, respectively. To examine whether the combination of clinical and genomic risk prediction models could boost model performance for prediction of recurrence GC was combined with IBCNC (G-IBCNC) and CC (G-CC). AUCs of these combined models in the discovery cohort were 0.89 (95% CI: 0.84-0.95) and 0.93 (95% CI: 0.88-0.97), respectively.


Independent Validation of Genomic-Based Classifiers

The prognostic performance of the locked classifiers was then assessed (with bioinformaticians blinded to clinical variables) on an independent validation set of 66 UCB patients. Clinical characteristics of patients in the validation and discovery sets were comparable (Table 1). Median patient age was 69.8 (IQR: 63.1-74.3) years. Median follow-up was 10.8 years; 33 (50%) patients recurred and 45 (68.2%) patients were dead by end of follow-up. By univariate analysis, GC (P=0.003), nodal status (P=0.006) and LVI (P=0.005) were prognostic for RFS, with GC having the highest hazard ratio (1.23 per every 10% increase in GC score; Table 3). GC performance as measured by standard ROC analysis was superior to single clinicopathologic variables (FIG. 1). This was confirmed by survival ROC analysis where AUC for GC (0.77; 95% CI: 0.65-0.90) was higher than any individual clinicopathologic variable (FIG. 2A).












TABLE 1








Discovery Cohort
Validation Cohort














Not


Not

















Not

recurred

Not

recurred
Discovery vs.

















Total n
recurred n
Recurred n
vs. Recurred
Total n
recurred n
Recurred n
vs. Recurred
Validation



(cohort %)
(column %)*
(column %)*
P
(cohort %)
(column %)*
(column %)*
P
P

























Cohort
133
(100)
65
(48.9)
68
(51.1)

66
(100)
33
(50.0)
33
(50.0)




(low %)

















Age






0.49






1.00
0.55


<70 years
73
(54.9)
38
(58.5)
35
(51.5)

33
(50.0)
17
(51.5)
16
(48.5)




≧70 years
60
(45.1)
27
(41.5)
33
(48.5)

33
(50.0)
18
(48.5)
17
(51.5)




Gender






0.82






0.73
1.00


Male
111
(83.5)
55
(84.6)
50
(82.4)

56
(84.8)
29
(87.9)
27
(81.8)




Female
22
(16.5)
10
(15.4)
12
(17.6)

10
(15.2)
4
(12.1)
6
(18.2)




Race






0.32






0.43
0.65


Caucasian
115
(86.5)
54
(83.1)
61
(89.7)

59
(89.4)
31
(93.9)
28
(84.8)




Not
18
(13.5)
11
(16.9)
7
(10.3)

7
(10.6)
2
(6.1)
5
(15.2)




Caucasian

















Tumor Stage






0.033






0.013
0.76


pT1
3
(2.3)
1
(1.5)
2
(0.0)

3
(4.5)
2
(6.1)
1
(3.0)




pT2
44
(33.1)
28
(43.1)
16
(23.5)

20
(30.3)
13
(39.4)
7
(21.2)




pT3
58
(43.6)
28
(43.1)
30
(44.1)

31
(47.0)
17
(51.5)
14
(42.4)




pT4a
28
(21.0)
8
(12.3)
20
(29.4)

12
(18.2)
1
(3.0)
11
(33.3)




Nodal Status






<0.001






0.011
0.64


N0
88
(66.2)
56
(86.2)
32
(47.1)

41
(62.1)
26
(78.8)
15
(45.5)




N1 3
45
(33.8)
9
(13.8)
36
(52.9)

25
(37.9)
7
(21.2)
18
(54.5)




Lympho-






<0.001






0.005
1.00


vascular

















Invasion

















Absent
58
(43.6)
39
(69.6)
19
(31.7)

30
(45.5)
20
(69.0)
10
(31.3)




Present
58
(43.6)
17
(30.4)
41
(68.3)

51
(47.0)
9
(51.0)
22
(68.7)




Adjuvant






0.022






0.22
0.17


Chemotherapy

















Not
78
(58.8)
45
(69.2)
33
(49.3)

32
(48.5)
19
(57.6)
13
(30.4)




administered

















Administered
54
(40.6)
20
(30.8)
34
(50.7)

34
(51.9)
14
(42.4)
20
(80.5)




Status at






<0.001






<0.001
0.17


Last Follow-up

















Alive
56
(42.1)
50
(76.9)
6
(8.8)

21
(31.8)
21
(63.6)
0
(0.0)




Dead
77
(57.9)
15
(23.1)
62
(91.2)

45
(68.2)
12
(36.4)
33
(100)





P values based on Fisher's exact test


*Except where noted






Clinicopathologic Characteristics of Patients in the Discovery and Validation Cohorts.










TABLE 2A








Important Biological Process(es)













Recurrence-specific
Cell






Feature Metrics in
proliferation/

Signaling




Discovery Cohort
Cell cycle

pathways/

















Feature
Associated
Chromosomal
t-test

regulation/
Cell differ-
Regulation of
Signal


















and Type
Gene
Location
AUC
P
MFD
Apoptosis
entiation
transcription
transduction
Other




















 1a
FOXO6
1p34.2
0.6251
0.0065
1.6514




Angiogenesis












regulation


 2a
HSD17B7
1q23
0.6234
0.0138
1.5401




Cholesterol












metabolism


 3a
ARID4B
1q42.1-q43
0.6223
0.0310
1.5427




Histone












methylation


 4a
ENAH
1q42.12
0.6617
0.0026
1.6644







 5b
MAP4K3
2p22.1
0.6067
0.0327
1.5895







 6a
MARCH7
2q24.2
0.6020
0.0275
1.5425




Protein












ubiquitination


 7c
MECOM
3q26.2
0.6434
0.0045
1.5113







 8a
LRBA
4q31.3
0.6261
0.0081
1.5432







 9a
MUT
6p12.3
0.6206
0.0232
1.5150




lipid metabolism


10a
CRCP
7q11.21
0.6135
0.0259
1.5144







11b
SYPL1
7q22.3
0.6064
0.0485
1.5328







12a
ARFGEF1
8q13
0.6322
0.0354
1.5580







13a
EHF
11p12
0.6437
0.0022
1.7470







14a
METTL7A
12q13.12
0.6128
0.0201
1.6586




Methyltransferase












activity


15a
PPP1R12A
12q15.a21
0.6104
0.0406
1.5429




Cell adhesion






aExonic feature




bExonic antisense feature




cIntronic antisense feature



Biological processes summarized using Gene Ontology Annotation database (Dimmer E C, Huntley R P, Alam-Fareque V, et al: The UniProt-GO Annotation database in 2011. Nucleic Acids Res 40: D565-D570. 2012).


Abbreviations: AUC, area under receiver operating characteristic curve; MFD, median told difference.







Summary description of markers comprising the genomic classifier for predicting post-cystectomy bladder cancer recurrence.
















TABLE 2B





SEQ ID NO
Affymetrix Probeset ID
Gene
Category
Chromosome
Start
End
Strand






















SEQ ID NO. 1
3326487
EHF
Coding
chr11
34673110
34673157
+


SEQ ID NO. 2
2458376
ENAH
Coding
chr1
225692693
225692726



SEQ ID NO. 3
3414753
METTL7A
Non coding (3′ UTR)
chr12
51326219
51326283
+


SEQ ID NO. 4
2332285
FOXO6
Non coding (3′ UTR)
chr1
41849216
41849252
+


SEQ ID NO. 5
2478155
MAP4K3
Non coding (3′ UTR Antisense)
chr2
39476662
39476964
+


SEQ ID NO. 6
3139092
ARFGEF1
Coding
chr8
68151048
68151077



SEQ ID NO. 7
2789391
LRBA
Coding
chr4
151791678
151791746



SEQ ID NO. 8
3463598
PPP1R12A
Coding
chr12
80190589
80190729



SEQ ID NO. 9
2461837
ARID4B
Coding
chr1
235392607
235392699



SEQ ID NO. 10
2512364
MARCH7
Coding
chr2
160621140
160621185
+


SEQ ID NO. 11
2364325
HSD17B7
Non coding (3′ UTR)
chr1
162782497
162782521
+


SEQ ID NO. 12
3066770
SYPL1
Non coding (3′ UTR)
chr7
105731011
105731149



SEQ ID NO. 13
2956442
MUT
Non coding (3′ UTR)
chr6
49399033
49399073



SEQ ID NO. 14
3005357
CRCP
Non coding (3′ UTR)
chr7
65619506
65619539
+


SEQ ID NO. 15
2651515
MECOM
Non coding (Intronic Antisense)
chr3
169003654
169003734
+









Genomic characteristics of markers comprising the genomic classifier for predicting post-cystectomy bladder cancer recurrence.











TABLE 3









Relative Risk of Recurrence










Hazard ratio (95% CI)
P













GC
1.23 (1.07-1.42)
0.003


Age <70 years
1.00 (0.99-1.01)
0.72


Male Gender
0.97 (0.89-1.06)
0.46


Caucasian Race
0.95 (0.85-1.05)
0.29


Tumor Stage [reference: pT2]


pT1
1.02 (0.83-1.26)
0.87


pT3
1.23 (0.50-3.05)
0.66


pT4a
3.37 (1.27-8.93)
0.015


Nodal Status N1-3
1.10 (1.03-1.19)
0.006


Lymphovascular Invasion present
1.12 (1.03-1.20)
0.005


Adjuvant Chemotherapy administered
1.03 (0.96-1.11)
0.35





Abbreviations:


CI, confidence interval;


GC, genomic classifier.


Univariable associations of genomic and clinicopathologic features with risk of post-cystectomy bladder cancer recurrence in the validation cohort.






Prognostic performance of IBCNC and CC were comparable (standard-ROC AUC of 0.74 and 0.77, respectively) with the genomic model in the validation set. Again, the combined genomic-clinical models measured the highest performance of models tested (FIG. 1). Furthermore in survival ROC analysis (which factors in time to recurrence) the boost in performance with the combined models was more marked in terms of AUC (IBCNC versus G-IBCNC, 0.73 versus 0.82; CC versus G-CC, 0.78 versus 0.86). FIGS. 2B and C show that the combined genomic-clinical classifiers had the highest specificity and sensitivity across the widest range of cut-offs.


Multivariable analyses (Based on Cox proportional hazards analysis with ridge regression) showed that the independent prognostic significance of the combined genomic-clinical classifiers for predicting recurrence compared to clinical models alone (Table 4). Decision curve analysis showed a higher overall net benefit for genomic-based classifiers compared to clinical-only risk models (FIG. 3). Discrimination plots confirmed that while GC identified patients who recurred better than clinical models alone, the combined G-IBCNC and G-CC models were superior at this discrimination with G-CC performing the best (P=5.55×10−7; FIG. 4). G-CC was therefore considered the benchmark genomic-clinicopathologic classifier for further evaluation.












TABLE 4









Relative Risk of Recurrence











Hazard ratio (95% CI)
P















Model 1





G-IBCNC
1.18 (1.03-1.36)
0.016



IBCNC
1.04 (0.90-1.20)
0.62



Model 2



G-CC
1.18 (1.04-1.33)
0.008



CC
1.10 (0.92-1.31)
0.30







Multivariable analysis comparing genomic-clinicopathologic versus clinical-only models in the validation cohort. Based on Cox proportional hazards analysis with ridge regression.






When survival-ROC AUCs were measured across a range of post-cystectomy intervals, G-CC showed consistently superior performance compared to CC and GC alone, indicating that the combined genomic-clinicopathologic classifier was the most prognostic indicator for RFS at any point in time after cystectomy (FIG. 5A). Validation set patients were then categorized by G-CC score and grouped as high-risk (G-CC score>0.5) or low-risk (G-CC score≦0.5). By competing risk analysis, high-risk patients had significantly elevated recurrence probabilities compared to low-risk patients (4-year probability: 81.5% versus 20.6%, respectively; P<0.001; FIG. 6). Patients were similarly risk-stratified based on IBCNC and G-IBCNC scores, and categorization by the “clinical-only” IBCNC nomogram was compared with genomic-clinical classifiers (FIG. 7). In FIG. 7, qQuadrants in grey represent situations where the combined genomic-clinical classifier reclassifies patients compared to the clinical classifier. Patients are colored by recurrence event and size of dots represent pathological tumor stage. Patients with no recurrence in the top left quadrant are reclassified correctly while patients with recurrence in the bottom right quadrant are reclassified correctly by the genomic-clinical classifier. Of the patients that are reclassified, the majority result in correct classification. Addition of genomic features to the IBCNC nomogram (as G-IBCNC) reclassified a total of 18 validation set patients into lower and higher predicted risk categories than those classified by IBCNC, of which 12 (66.7%) were reclassified correctly by outcome. Similarly, G-CC reclassified 12 patients that were originally risk stratified by IBCNC, of which 10 (83.3%) were reclassified correctly.











TABLE 5









Relative Risk of Recurrence










Hazard ratio (95% CI)
P













GC
1.42 (1.11-1.81)
0.005


Age <70 years
0.90 (0.78-1.03)
0.12


Male Gender
0.00 (0.00-3.03)
0.084


Caucasian Race
0.36 (0.11-1.20)
0.097


Tumor Stage [reference: pT2]


pT1
2.06 (0.15-27.73)
0.59


pT3
1.82 (0.61-5.42)
0.29


pT4a
1.83 (0.50-6.69)
0.36


Nodal Status N1-3
9.80 (1.50-64.04)
0.017


Lymphovascular Invasion present
2.74 (1.02-7.33)
0.045


Adjuvant Chemotherapy administered
0.94 (0.41-2.13)
0.88


GC × Nodal Status*
0.03 (0.00-0.72)
0.030


Gender × Age*
1.12 (0.98-1.29)
0.098





*Interaction term


Abbreviations:


CI, confidence interval;


GC, genomic classifier.


Multivariable associations of genomic and clinicopathologic features with risk of post-cystectomy bladder cancer recurrence in the validation cohort






Nodal Status and Performance of Genomic-Based Classifier

When validation cohort patients were categorized based on pathological stage, median GC scores were consistently higher in patients who recurred compared to those who did not (FIG. 8). By multivariable analysis, after adjusting for demographic, clinicopathologic and treatment covariates, GC remained prognostic for recurrence (P=0.005; Table 5). In this analysis, a significant interaction was noted between GC and nodal status (P=0.030) that prompted further exploration of GC score distribution based on nodal stage. When categorized by nodal status, GC scores were able to better discriminate validation cohort patients compared to CC (FIG. 9). As shown in FIG. 9, GC separates cases from controls in both LNI positive and LNI negative patients, as indicated by the non-overlapping 95% CI. In comparison, CC does not separate cases from controls as well. 95% CI calculated based on McGill et al. GC Wilcoxon rank-sum p-value for comparing case with control is 0.0078 compared CC with a p-value of 0.069 in the LNI negative patients. While in LNI positive patients, GC and CC has p-values of 0.16 and 0.41 respectively.


A subset analysis was then conducted on node-negative patients. These patients represent subjects who do not routinely receive adjuvant therapy. Assuming that higher risk patients have more to gain from therapeutic intensification in comparison to low risk, better identification of the subset of men most at risk by a more accurate risk prediction model could be beneficial. CC showed a trend towards significance in separating node-negative patients into risk groups (P=0.051). However, GC significantly stratified these patients based on recurrence (4-year probabilities: high 56.2% versus low 13%; P=0.004; FIG. 10). When measured across time, AUCs for genomic-based classifiers were consistently higher compared to CC alone in node-negative patients (FIG. 5B).


Analysis of Prior Signatures and Biological Processes

As the microarrays used to profile the study cohorts offer transcriptome-wide coverage including ability to interrogate entire lengths of protein-coding genes and non-coding RNAs, it was feasible to evaluate the performance of previously reported prognostic signatures for invasive UCB derived using early-generation microarrays. The performances of seven published post-cystectomy prognostic genomic signatures for muscle-invasive UCB were compared with the GC developed in this study (Table 6).(Blaveri et al. 2005; Sanchez-Carbayo et al. 2006; Kim et al. 2010; Kim et al. 2011; Riester et al. 2012) Genomic markers that comprised the individual signatures were mapped back to the respective Human Exon GeneChip features, and the performance of each signature was optimized in the discovery set as done originally for GC. Therefore, as expected, nearly all published signatures demonstrated high survival-ROC AUCs in the discovery set as that observed with GC. However, when these locked signatures were applied to the validation set (again, with bioinformaticians blinded to clinical variables) the AUC for each model decreased leaving the GC having the best validated performance (FIG. 11). Of the AUCs of published signatures that were modeled, lower bounds of the 95% CIs of 5/7 signatures were >0.50, suggesting a statistically significant ability to predict recurrence greater than random chance. The AUC of GC was 0.05 points higher than the best performing published signature, a 61-feature signature for post-cystectomy survival in patients with muscle-invasive and node-positive UCB reported by Kim et al, (Kim et al. 2010) which had an AUC of 0.72 (95% CI: 0.60-0.87).














TABLE 6










Signature







Size

Survival-ROC



Discovery

(no. of

AUC (95% CI)














Cohort

mappable
Prognostic
Discovery
Validation


Predictor Label*
n†
Discovery Profiling Array Platform
transcripts)
Endpoint
cohort
cohort
















GC1
133a
Human Exon 1.0 ST GeneChip
15
Recurrence
0.83 (0.75-0.91)
0.77 (0.65-0.91)




(Affymetrix)

free survival




Kim 2010 - OS2
62a
Human-6 v2.0 Expression Beadchip
61
Overall survival
0.85 (0.78-0.92)
0.72 (0.60-0.87)




(Illumina)






Kim 2010 - C5S2
62b
Human-6 v2.0 Expression Beadchip
49
Cancer specific
0.82 (0.75-0.91)
0.72 (0.60-0.85)




(Illumina)

survival




Kim 2010 - Prog2
62b
Human-6 v2.0 Expression Beadchip
44
Progression
0.82 (0.75-0.90)
0.71 (0.59-0.85)




(Illumina)






Riester 20123
78b
Human Genome U133 Plus 2.0
20
Overall survival
0.79 (0.71-0.89)
0.71 (0.58-0.83)




GeneChip (Affymetrix)






Sanchez-Carbayo 20064
74c
Human Genome U133A GeneChip
85
Overall survival
0.85 (0.80-0.93)
0.67 (0.54-0.83)




(Affymetrix)






Blaveri 20055
40b
Custom cDNA array
24
Overall survival
0.83 (0.76-0.90)
0.63 (0.50-0.77)


Kim 20116
38b
Human-6 v2.0 Expression Beadchip
4
Progression
0.82 (0.75-0.90)
0.51 (0.37-0.66)




(Illumina)





Summary and performance metrics of prior prognostic signatures for high-risk bladder cancer in comparison with the genomic classifier.


†Patients with muscle-invasive or node-positive bladder cancer



aParaffin-embedded primary tumor specimens




bFrozen primary tumor specimens














TABLE 7





Associations of markers comprising the genomic classifier with major Gene Ontology clusters


Biological interactions based on Human Signaling Network v5









embedded image







*Nine genes within GC directly associated with one or more pathways






To analyze the biological relevance of markers included in GC, an interactome network-based gene set enrichment analysis of their 257 first-degree partners was performed (FIG. 12). Of these, 248 unique genes were identified to biologically interact with at least one of the 15 markers within GC. Biological processes and KEGG pathways were analyzed using the DAVID functional annotation tool, which indicated enrichment of GO terms associated with regulation of kinase activity and protein transport/localization. Additionally, GC signature genes were also well represented within GO terms associated with receptor and intracellular signaling pathways, and regulation of cell proliferation and differentiation (Table 7).


These results showed that whole transcriptome expression profiling could be utilized to stratify risk of disease recurrence in patients who have undergone radical cystectomy for muscle invasive bladder cancer. These results further showed that a 15-marker genomic classifier (GC) of the present invention surpasses the predictive power of previously reported clinical and genomic prognostic markers in bladder cancer. The results demonstrated that methods and markers of the present invention are useful for predicting risk for cancer recurrence. These results suggested that the methods and markers of the present invention would be useful for diagnosing, prognosing, determining the progression of cancer, or predicting benefit from therapy in a subject having cancer.


Example 2
Prognostic Value of Univariable and Combinations of Markers From a 15 Biomarker Panel for Muscle Invasive Bladder Cancer

The 15 markers identified in the genomic classifier in Example 1 (Table 2A, Table 2B) were assessed for their performance across a range of different metrics for the prediction of cancer recurrence within different subsets of clinical relevancy.


As shown in Table 8, these 15 markers, as univariable classifiers, were statistically significant in a pooled discovery and validation set (n=199; see Example 1) based on the Wilcoxon test (p-value <=0.05) for the Area under the ROC curve (AUC). The probeset ID number of the corresponding markers (Table 2B) as provided by Affymetrix (http://www.affymetrix.com/analysis/index.affx) was used to represent each marker.


Significance of the selected features was evidenced by multiple additional metrics (either in their raw values or as their associated P-value for assessment of statistical significance) including:

    • Sensitivity: proportion of the actual number of patients with the event that are correctly identified as such. Higher values indicate better performance.
    • Specificity: proportion of the actual number of patients without the event that are correctly identified as such. Higher values indicate better performance.
    • Area under the ROC curve (AUC): Corresponds to the area under the receiver operating characteristic curve, which plots the performance of a feature or classifier for all thresholds of sensitivity and specificity. Higher values indicate better performance. For survival AUC, performance was calculated for 4 years.
    • Accuracy: Proportion of patients correctly predicted. Higher values indicate better performance.
    • Positive Predictive Value (PPV): proportion of predicted events that are true events. Higher values indicate better performance.
    • Negative Predictive Value (NPV): proportion of predicted non-events that are true non-events. Higher values indicate better performance.
    • Median Fold Difference (MFD): the ratio of the median expression value for each group. Values away from 1 indicate better performance.
    • Univariable Analysis (UVA) odds ratio (OR): measures the effect size of the feature or classifier when partitioning the scores into low and high risk groups. For this metric, these groups are obtained by partitioning the set of samples into low and high risk expression values using the PAM clustering method. Values away from 1 indicate better performance.
    • Multivariable Analysis (MVA) odds ratio (OR): measures the independent prognostic ability of the feature or classifier when partitioning the values into low and high risk groups. For this metric, these groups are obtained by partitioning the set of samples into low and high risk expression values using the PAM clustering method. Values away from 1 indicate better performance.
    • UVA hazard ratio (HR): measures the ratio of the hazard rates when partitioning the expression values into low and high risk groups and incorporates the time to event through Cox proportionate hazard modeling. For this metric, these groups are obtained by partitioning the expression values into low and high risk using the PAM clustering method. Values away from 1 indicate better performance.
    • MVA hazard ratio (HR): measures the independent prognostic ability relative to other variables when partitioning the values into low and high risk groups and incorporates the time to event through Cox proportionate hazard modeling. For this metric, these groups are obtained by partitioning the expression values into low and high risk using the PAM clustering method. Values away from 1 indicate better performance.


Multivariable analyses included the following clinical data: age, gender, tumor stage, lymphovascular invasion, node status, race and adjuvant chemotherapy status (see Table 1).


The associated p-value provided for the metrics gives a measure of the statistical significance of the corresponding metric. The threshold of P-value <=0.05 is used as a way of defining those features that are statistically significant for the given metric and endpoint. The cut-off used for each marker is indicated. When dichotomization is necessary for a performance metric, the marker expression values are dichotomized using unsupervised clustering in the pamr package.


The superior performance provided by the 15 markers of the present invention is observed not only within the entire cohort used, but also when excluding the group of patients with pT2 (organ-confined) disease (Table 9) and within patients with negative lymph node involvement (Table 10). The former group represents patients that are prime candidates for therapy. The assessment of their likelihood of recurrence based on these 15 markers of the present invention can provide additional insight into the need for treatment. In contrast, patients with Lymph Node negative status represent a group that would be a candidate for observation; indications of aggressive disease based on these 15 markers of the present invention may be used to suggest treatment for these patients.


The 15 markers of the present invention are useful as univariable predictors; additionally, the combination of subsets of these 15 markers through a machine learning algorithm results in enhanced performance. As shown in Table 11, pairwise classifiers can result in an improved performance for the recurrence endpoint compared to their univariable counterparts, with all the classifiers listed presenting statistical significance based on, at least, Wilcox P-value. In Table 11, each classifier is described by the machine learning algorithm that combines the markers (column ‘classifier’) as well as the probeset ID number of the corresponding markers as provided by Affymetrix (http://www.affymetrix.com/analysis/index.affx).


These classifiers were trained and tuned in the discovery cohort (n=133) and the performance shown in Table 11 corresponds to that obtained for different metrics in the validation set (n=66). When dichotomization is necessary for a performance metric, the classifier scores are dichotomized using unsupervised clustering in the pamr package. The machine learning algorithms used are Naïve Bayes (NB), recursive Partitioning (Rpart), Support Vector Machines (SVMs), Random Forest (RF) and K Nearest Neighbors (KNN). These machine learning algorithms were executed with default parameters using packages rpart 4.1-0, HDclassif 1.2.2, randomForest 4.6-7, caret 5.15-61, cluster 1.14.3, e1071 1.6-1, class 7.3-5 in R. Each classifier generates a score between 0 and 1, except for SVM which generates a score from −∞ to +∞; in all cases, higher score values indicate higher probability of recurrence.


The improved performance of the classifiers built from combinations of subsets of the 15 markers is also observed within patients with negative lymph node involvement (Table 12), pT2 (organ-confined disease) patients (Table 13), patients with positive lymph node involvement (Table 14) as well as within the subset of patients that excludes the group with pT2 (organ-confined) disease (see Table 15). Patients with clinical low risk such as the first two groups (LNI- and pT2) can be candidates for treatment if aggressive disease based on the likelihood of recurrence obtained from the 15 markers is detected. In contrast, patients at a higher risk such as the second two groups may be spared unnecessary treatment if a low likelihood of recurrence is observed from the 15 markers of the present invention.


These results showed that the methods and markers of the present invention are useful for prognosing muscle invasive bladder cancer recurrence. These results further showed that the methods and markers of the present invention are useful for diagnosing, prognosing, determining the progression of cancer, or predicting benefit from therapy in a subject having cancer.




















TABLE 8







Affymetrix

WILCOX
KS P-

T-TEST
ACCU-
ACCURACY
SENSI-
SPECI-




Probeset ID
AUC
P-VALUE
VALUE
MFD
P-VALUE
RACY
P-VALUE
TIVITY
FICITY
PPV
NPV





3326487
0.64
0.0008
0.0016
1.41
0.0004
0.59
0.0138
0.48
0.70
0.62
0.57


2458376
0.68
0.0000
0.0001
1.65
0.0000
0.63
0.0004
0.49
0.78
0.69
0.59


3414753
0.65
0.0003
0.0002
1.68
0.0003
0.64
0.0001
0.57
0.70
0.67
0.62


2332285
0.67
0.0000
0.0000
1.80
0.0000
0.63
0.0004
0.56
0.69
0.66
0.61


2478155
0.65
0.0002
0.0001
1.58
0.0003
0.60
0.0042
0.53
0.67
0.63
0.58


3139092
0.65
0.0003
0.0002
1.58
0.0013
0.59
0.0138
0.47
0.71
0.63
0.56


2789391
0.63
0.0012
0.0004
1.44
0.0007
0.63
0.0004
0.58
0.67
0.65
0.61


3463598
0.63
0.0016
0.0000
1.46
0.0016
0.64
0.0001
0.50
0.79
0.71
0.61


2461837
0.64
0.0007
0.0000
1.44
0.0017
0.59
0.0138
0.54
0.63
0.60
0.57


2512364
0.65
0.0004
0.0000
1.56
0.0003
0.63
0.0002
0.62
0.64
0.64
0.62


2364325
0.66
0.0001
0.0001
1.39
0.0002
0.60
0.0042
0.50
0.70
0.64
0.58


3066770
0.63
0.0016
0.0003
1.49
0.0024
0.62
0.0007
0.51
0.73
0.67
0.60


2956442
0.62
0.0039
0.0021
1.42
0.0049
0.62
0.0007
0.60
0.64
0.64
0.61


3005357
0.65
0.0002
0.0001
1.73
0.0004
0.61
0.0028
0.58
0.63
0.62
0.60


2651515
0.64
0.0006
0.0000
1.43
0.0004
0.65
0.0000
0.51
0.79
0.71
0.61





Affymetrix

KM P-
SURV-
UVA
UVA HR
UVA
UVA OR
MVA
MVA HR
MVA
MVA OR


Probeset ID
CUTOFF
VALUE
AUC
HR
P-VALUE
OR
P-VALUE
HR
P-VALUE
OR
P-VALUE





3326487
4.78
0.0136
0.64
1.16
0.0004
1.27
0.0006
1.10
0.05
1.21
0.024


2458376
4.09
0.0001
0.67
1.21
0.0001
1.40
0.0001
1.11
0.08
1.29
0.012


3414753
4.44
0.0002
0.66
1.14
0.0011
1.26
0.0004
1.12
0.02
1.33
0.001


2332285
4.81
0.0004
0.66
1.17
0.0001
1.30
0.0001
1.11
0.03
1.28
0.003


2478155
4.75
0.0035
0.64
1.17
0.0007
1.30
0.0004
1.13
0.03
1.33
0.003


3139092
4.35
0.0077
0.67
1.15
0.0027
1.26
0.0018
1.12
0.03
1.29
0.006


2789391
5.54
0.0002
0.64
1.15
0.0008
1.23
0.0010
1.13
0.01
1.24
0.006


3463598
4.89
0.0000
0.64
1.16
0.0032
1.28
0.0021
1.08
0.23
1.22
0.047


2461837
4.27
0.0214
0.64
1.16
0.0031
1.27
0.0022
1.12
0.06
1.26
0.019


2512364
5.60
0.0001
0.65
1.16
0.0004
1.26
0.0004
1.14
0.01
1.31
0.001


2364325
5.87
0.0022
0.67
1.15
0.0005
1.27
0.0003
1.12
0.02
1.28
0.002


3066770
5.02
0.0012
0.64
1.13
0.0048
1.23
0.0030
1.08
0.15
1.20
0.032


2956442
4.75
0.0003
0.62
1.13
0.0071
1.21
0.0057
1.12
0.04
1.21
0.025


3005357
4.34
0.0018
0.66
1.15
0.0009
1.26
0.0006
1.13
0.01
1.30
0.003


2651515
4.21
0.0000
0.63
1.19
0.0006
1.35
0.0007
1.14
0.03
1.42
0.002









Performance of the 15 markers across different metrics for the Recurrence endpoint


















TABLE 9







Affymetrix

WILCOX
KS P-

T-TEST

ACCURACY




Probeset ID
AUC
P-VALUE
VALUE
MFD
P-VALUE
ACCURACY
P-VALUE
SENSITIVITY
SPECIFICITY





3326487
0.62
0.0166
0.0284
1.47
0.0074
0.58
0.5365
0.50
0.68


2458376
0.67
0.0006
0.0002
1.71
0.0021
0.61
0.2720
0.53
0.72


3414753
0.67
0.0010
0.0006
1.74
0.0004
0.64
0.0684
0.59
0.72


2332285
0.69
0.0002
0.0010
1.89
0.0001
0.64
0.0950
0.59
0.70


2478155
0.64
0.0058
0.0057
1.40
0.0061
0.61
0.2720
0.56
0.67


3139092
0.65
0.0030
0.0066
1.57
0.0075
0.57
0.6047
0.49
0.68


2789391
0.63
0.0089
0.0044
1.53
0.0039
0.63
0.1284
0.56
0.72


3463598
0.60
0.0467
0.0019
1.50
0.0307
0.63
0.1284
0.55
0.74


2461837
0.62
0.0207
0.0039
1.46
0.0440
0.56
0.6697
0.49
0.67


2512364
0.64
0.0075
0.0005
1.53
0.0038
0.61
0.2170
0.59
0.65


2364325
0.66
0.0014
0.0016
1.41
0.0015
0.60
0.3330
0.53
0.70


3066770
0.61
0.0330
0.0077
1.59
0.0320
0.61
0.2720
0.53
0.72


2956442
0.62
0.0149
0.0185
1.44
0.0172
0.63
0.1284
0.63
0.63


3005357
0.65
0.0025
0.0029
1.73
0.0032
0.59
0.3986
0.59
0.60


2651515
0.64
0.0073
0.0003
1.43
0.0069
0.64
0.0684
0.55
0.77





Affymetrix



KM P-
SURV-

UVA HR

UVA OR


Probeset ID
PPV
NPV
CUTOFF
VALUE
AUC
UVA HR
P-VALUE
UVA OR
P-VALUE





3326487
0.68
0.50
4.84
0.0639
0.63
1.13
0.0128
1.24
0.0088


2458376
0.72
0.53
4.10
0.0087
0.66
1.14
0.0110
1.33
0.0030


3414753
0.74
0.56
4.51
0.0011
0.67
1.15
0.0030
1.33
0.0008


2332285
0.73
0.56
4.95
0.0040
0.67
1.15
0.0013
1.33
0.0003


2478155
0.70
0.53
4.88
0.0116
0.62
1.14
0.0213
1.29
0.0074


3139092
0.68
0.49
4.40
0.0574
0.67
1.13
0.0159
1.27
0.0090


2789391
0.73
0.55
5.83
0.0018
0.62
1.14
0.0056
1.24
0.0049


3463598
0.74
0.55
4.89
0.0027
0.61
1.11
0.0672
1.22
0.0327


2461837
0.67
0.49
4.75
0.0934
0.61
1.11
0.0647
1.20
0.0458


2512364
0.70
0.54
5.93
0.0098
0.64
1.14
0.0066
1.24
0.0047


2364325
0.71
0.52
5.87
0.0090
0.67
1.13
0.0067
1.27
0.0022


3066770
0.72
0.53
5.03
0.0147
0.62
1.09
0.0760
1.19
0.0340


2956442
0.70
0.55
4.89
0.0020
0.62
1.12
0.0342
1.22
0.0189


3005357
0.67
0.52
4.50
0.0327
0.65
1.13
0.0099
1.27
0.0041


2651515
0.77
0.56
4.36
0.0002
0.65
1.15
0.0151
1.31
0.0085









Performance of the 15 markers across different metrics for the Recurrence endpoint in the subset of patients excluding pT2 (organ-confined) disease.


















TABLE 10







Affymetrix

WILCOX
KS P-

T-TEST

ACCURACY




Probeset ID
AUC
P-VALUE
VALUE
MFD
P-VALUE
ACCURACY
P-VALUE
SENSITIVITY
SPECIFICITY





3326487
0.62
0.022
0.005
1.40
0.0027
0.67
0.26
0.49
0.77


2458376
0.68
0.001
0.006
1.47
0.0007
0.66
0.33
0.43
0.79


3414753
0.64
0.009
0.001
1.78
0.0072
0.67
0.26
0.57
0.72


2332285
0.67
0.001
0.001
1.63
0.0007
0.64
0.54
0.49
0.72


2478155
0.71
0.000
0.000
1.77
0.0001
0.65
0.39
0.60
0.68


3139092
0.67
0.001
0.002
1.59
0.0054
0.62
0.68
0.40
0.74


2789391
0.66
0.003
0.000
1.51
0.0020
0.67
0.21
0.60
0.72


3463598
0.62
0.020
0.001
1.50
0.0191
0.70
0.08
0.51
0.80


2461837
0.65
0.006
0.002
1.46
0.0119
0.60
0.80
0.60
0.61


2512364
0.69
0.000
0.000
1.65
0.0003
0.66
0.33
0.68
0.65


2364325
0.68
0.001
0.001
1.41
0.0009
0.65
0.39
0.51
0.73


3066770
0.64
0.010
0.002
1.52
0.0124
0.69
0.12
0.57
0.76


2956442
0.60
0.052
0.044
1.41
0.0442
0.62
0.68
0.57
0.65


3005357
0.66
0.003
0.006
1.82
0.0026
0.63
0.61
0.62
0.63


2651515
0.67
0.001
0.001
1.43
0.0019
0.61
0.74
0.55
0.65





Affymetrix



KM P-
SURV-

UVA HR

UVA OR


Probeset ID
PPV
NPV
CUTOFF
VALUE
AUC
UVA HR
P-VALUE
UVA OR
P-VALUE





3326487
0.55
0.72
4.72
0.002
0.60
1.13
0.0027
1.28
0.004


2458376
0.54
0.71
4.06
0.006
0.67
1.13
0.0009
1.40
0.001


3414753
0.54
0.75
4.40
0.001
0.61
1.12
0.0119
1.24
0.009


2332285
0.50
0.71
4.82
0.021
0.63
1.13
0.0014
1.31
0.001


2478155
0.52
0.75
4.71
0.001
0.68
1.14
0.0002
1.40
0.000


3139092
0.48
0.69
4.40
0.056
0.69
1.13
0.0059
1.28
0.007


2789391
0.55
0.76
5.79
0.000
0.65
1.13
0.0026
1.28
0.003


3463598
0.60
0.74
4.90
0.000
0.61
1.12
0.0232
1.25
0.022


2461837
0.47
0.72
4.02
0.030
0.65
1.13
0.0120
1.27
0.014


2512364
0.52
0.78
5.61
0.000
0.69
1.13
0.0005
1.33
0.001


2364325
0.52
0.72
5.89
0.004
0.68
1.13
0.0016
1.30
0.001


3066770
0.57
0.76
4.83
0.000
0.64
1.12
0.0107
1.23
0.015


2956442
0.48
0.73
4.74
0.010
0.61
1.12
0.0518
1.18
0.046


3005357
0.49
0.74
4.37
0.005
0.66
1.13
0.0030
1.28
0.003


2651515
0.47
0.72
3.82
0.012
0.67
1.14
0.0010
1.39
0.003









Performance of the 15 markers across different metrics for the Recurrence endpoint in the subset of patients with negative lymph node involvement.


























TABLE 11







WILCOX
KS P-
T-TEST
ACCU-
ACCURACY
SENSI-
SPECI-



KM P-
SURV-
UVA HR
UVA OR
MVA HR
MVA OR


CLASSIFIER
AUC
P-VALUE
VALUE
P-VALUE
RACY
P-VALUE
TIVITY
FICITY
PPV
NPV
CUTOFF
VALUE
AUC
P-VALUE
P-VALUE
P-VALUE
P-VALUE
































nb:2478155
0.77
0.0001
0.0007
0.0001
0.73
0.0001
0.70
0.76
0.74
0.71
0.47
0.0002
0.77
0.0002
0.0007
0.001
0.002


2364325



















knn:2458376
0.78
0.0001
0.0053
0.0001
0.70
0.0009
0.64
0.76
0.72
0.68
0.50
0.0019
0.75
0.0003
0.0004
0.010
0.003


2364325



















nb:2332285
0.77
0.0001
0.0007
0.0006
0.70
0.0009
0.61
0.79
0.74
0.67
0.49
0.0015
0.78
0.0008
0.0018
0.006
0.003


3005357



















rf:2478155
0.77
0.0001
0.0000
0.0000
0.76
0.0000
0.70
0.82
0.79
0.73
0.62
0.0000
0.77
0.0004
0.0004
0.008
0.001


2364325



















nb:2458376
0.77
0.0001
0.0019
0.0002
0.68
0.0021
0.48
0.88
0.80
0.63
0.50
0.0018
0.77
0.0005
0.0011
0.021
0.004


3005357



















svm:2478155
0.77
0.0001
0.0019
0.0001
0.71
0.0004
0.73
0.70
0.71
0.72
−0.07
0.0006
0.79
0.0003
0.0004
0.001
0.001


3005357



















rf:2458376
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0.0001
0.0001
0.0001
0.68
0.0021
0.55
0.82
0.75
0.64
0.65
0.0027
0.77
0.0005
0.0005
0.007
0.001


2364325



















svm:2332285
0.77
0.0001
0.0001
0.0004
0.67
0.0046
0.58
0.76
0.70
0.64
−0.08
0.0075
0.76
0.0011
0.0013
0.023
0.008


3066770



















knn:3414753
0.77
0.0001
0.0022
0.0004
0.67
0.0046
0.64
0.70
0.68
0.66
0.50
0.0072
0.74
0.0008
0.0011
0.007
0.002


3005357



















svm:2332285
0.76
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0.0019
0.0002
0.73
0.0001
0.64
0.82
0.78
0.69
0.00
0.0002
0.77
0.0005
0.0007
0.007
0.003


2364325



















nb:2332285
0.76
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0.0001
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0.68
0.0021
0.61
0.76
0.71
0.66
0.49
0.0033
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0.0020
0.0029
0.010
0.005


3139092



















nb:2458376
0.76
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0.0002
0.65
0.0093
0.42
0.88
0.78
0.60
0.53
0.0122
0.76
0.0006
0.0013
0.084
0.011


3414753



















knn:2458376
0.77
0.0002
0.0053
0.0001
0.68
0.0021
0.70
0.67
0.68
0.69
0.48
0.0039
0.75
0.0009
0.0005
0.011
0.001


3005357



















nb:3414753
0.76
0.0002
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0.0013
0.64
0.0178
0.48
0.79
0.70
0.60
0.52
0.0157
0.74
0.0020
0.0032
0.048
0.011


2332285



















nb:2478155
0.76
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0.0019
0.0003
0.68
0.0021
0.67
0.70
0.69
0.68
0.47
0.0037
0.73
0.0003
0.0013
0.001
0.002


3139092



















svm:3414753
0.76
0.0002
0.0002
0.0002
0.65
0.0093
0.64
0.67
0.66
0.65
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0.0201
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0.002


2478155



















knn:2478155
0.76
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0.0119
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0.52
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0.41
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0.002
0.001


3005357



















nb:2478155
0.75
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0.0002
0.0002
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0.69
0.71
0.47
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0.004
0.002


2512364



















nb:3414753
0.75
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0.0004
0.67
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0.64
0.70
0.68
0.66
0.47
0.0072
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0.004
0.001


3005357



















svm:2332285
0.75
0.0003
0.0002
0.0002
0.71
0.0004
0.76
0.67
0.69
0.73
0.01
0.0006
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0.0011
0.0008
0.003
0.001


3139092



















nb:2458376
0.75
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0.0007
0.0002
0.68
0.0021
0.48
0.88
0.80
0.63
0.51
0.0018
0.72
0.0008
0.0011
0.063
0.007


2512364



















rf:2332285
0.76
0.0004
0.0003
0.0002
0.70
0.0009
0.79
0.61
0.67
0.74
0.39
0.0015
0.78
0.0005
0.0008
0.001
0.001


3005357



















nb:3414753
0.75
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0.0007
0.0004
0.73
0.0001
0.76
0.70
0.71
0.74
0.45
0.0002
0.77
0.0005
0.0014
0.011
0.004


2364325



















nb:2332285
0.75
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0.0007
0.0007
0.70
0.0009
0.55
0.85
0.78
0.65
0.53
0.0007
0.76
0.0011
0.0020
0.015
0.006


2364325



















svm:2332285
0.75
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0.0019
0.0012
0.70
0.0009
0.61
0.79
0.74
0.67
−0.08
0.0017
0.75
0.0026
0.0027
0.024
0.008


2956442



















svm:2458376
0.75
0.0004
0.0048
0.0002
0.70
0.0009
0.52
0.88
0.81
0.64
0.11
0.0010
0.74
0.0015
0.0009
0.048
0.003


3005357



















rf:2332285
0.75
0.0004
0.0022
0.0003
0.67
0.0046
0.85
0.48
0.62
0.76
0.42
0.0093
0.74
0.0020
0.0011
0.089
0.005


2478155



















rf:2458376
0.75
0.0004
0.0053
0.0002
0.67
0.0046
0.64
0.70
0.68
0.66
0.57
0.0078
0.77
0.0013
0.0008
0.002
0.000


3005357



















nb:2332285
0.75
0.0004
0.0019
0.0010
0.70
0.0009
0.55
0.85
0.78
0.65
0.47
0.0007
0.73
0.0017
0.0030
0.083
0.011


2651515



















nb:2458376
0.75
0.0004
0.0048
0.0004
0.68
0.0021
0.48
0.88
0.80
0.63
0.50
0.0039
0.75
0.0013
0.0020
0.031
0.009


3139092



















nb:2478155
0.75
0.0004
0.0048
0.0004
0.68
0.0021
0.55
0.82
0.75
0.64
0.49
0.0008
0.71
0.0003
0.0015
0.004
0.004


3066770



















nb:3005357
0.75
0.0004
0.0019
0.0004
0.67
0.0046
0.76
0.58
0.64
0.70
0.39
0.0063
0.77
0.0003
0.0017
0.013
0.002


2651515



















nb:2364325
0.75
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0.0007
0.0004
0.74
0.0001
0.73
0.76
0.75
0.74
0.46
0.0001
0.76
0.0005
0.0012
0.001
0.001


3005357



















nb:2512364
0.75
0.0005
0.0001
0.0003
0.73
0.0001
0.73
0.73
0.73
0.73
0.48
0.0002
0.73
0.0005
0.0010
0.005
0.002


2364325



















nb:3139092
0.74
0.0005
0.0048
0.0008
0.68
0.0021
0.70
0.67
0.68
0.69
0.45
0.0031
0.76
0.0011
0.0022
0.002
0.004


2364325



















nb:3139092
0.74
0.0005
0.0002
0.0007
0.67
0.0046
0.58
0.76
0.70
0.64
0.49
0.0013
0.77
0.0010
0.0020
0.001
0.001


3005357



















rf:2478155
0.75
0.0005
0.0022
0.0003
0.70
0.0009
0.55
0.85
0.78
0.65
0.64
0.0006
0.72
0.0022
0.0012
0.085
0.003


3463598



















knn:3414753
0.75
0.0006
0.0022
0.0003
0.71
0.0004
0.61
0.82
0.77
0.68
0.55
0.0005
0.75
0.0008
0.0009
0.026
0.003


2512364



















nb:3414753
0.74
0.0006
0.0048
0.0011
0.64
0.0178
0.48
0.79
0.70
0.60
0.51
0.0177
0.76
0.0012
0.0029
0.008
0.004


3139092



















svm:3139092
0.74
0.0006
0.0048
0.0005
0.70
0.0009
0.76
0.64
0.68
0.72
−0.15
0.0013
0.76
0.0012
0.0014
0.001
0.003


2364325



















knn:2458376
0.74
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0.71
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0.58
0.85
0.79
0.67
0.50
0.0001
0.73
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0.0019
0.025
0.005


2651515



















rf:2458376
0.75
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0.0006
0.70
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0.79
0.61
0.67
0.74
0.42
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0.0028
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0.005


2332285



















nb:3414753
0.74
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0.0004
0.73
0.0001
0.73
0.73
0.73
0.73
0.48
0.0002
0.74
0.0006
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0.018
0.003


2512364



















svm:3414753
0.74
0.0006
0.0007
0.0003
0.73
0.0001
0.70
0.76
0.74
0.71
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0.0002
0.74
0.0004
0.0011
0.008
0.003


2512364



















rpart:2478155
0.70
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0.70
0.0009
0.88
0.52
0.64
0.81
0.47
0.0019
0.67
0.0047
0.0014
0.058
0.007


2956442



















rpart:2478155
0.70
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0.70
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0.88
0.52
0.64
0.81
0.47
0.0019
0.67
0.0047
0.0014
0.058
0.007


3066770



















nb:3066770
0.74
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0.0008
0.65
0.0093
0.52
0.79
0.71
0.62
0.48
0.0054
0.76
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0.0021
0.003
0.003


3005357



















rf:2332285
0.74
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0.70
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0.58
0.82
0.76
0.66
0.38
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0.0018
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2651515



















knn:3463598
0.73
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0.55
0.88
0.82
0.66
0.54
0.0001
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0.007


3066770



















svm:2364325
0.74
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0.73
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0.73
0.73
0.73
0.03
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3005357



















rf:3414753
0.74
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0.65
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0.67
0.66
0.65
0.53
0.0201
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2478155



















knn:3066770
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0.79
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0.003


3005357



















nb:2512364
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3005357



















nb:2512364
0.74
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0.76
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3066770



















svm:2458376
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0.52
0.79
0.71
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3066770



















knn:2478155
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0.72
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0.002


2512364



















nb:2478155
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0.002


2651515



















nb:2512364
0.73
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0.30
0.97
0.91
0.58
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0.004


2651515



















nb:3326487
0.73
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0.0066
0.64
0.0178
0.45
0.82
0.71
0.60
0.48
0.0180
0.71
0.0047
0.0116
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2332285



















rpart:2332285
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0.70
0.0009
0.55
0.85
0.78
0.65
0.53
0.0008
0.70
0.0014
0.0015
0.045
0.007


3463598



















rpart:2458376
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0.70
0.0009
0.55
0.85
0.78
0.65
0.53
0.0008
0.70
0.0014
0.0015
0.045
0.007


3463598



















rpart:2478155
0.70
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0.70
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0.55
0.85
0.78
0.65
0.53
0.0008
0.70
0.0014
0.0015
0.045
0.007


3463598



















rpart:2789391
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0.0119
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0.70
0.0009
0.55
0.85
0.78
0.65
0.53
0.0008
0.70
0.0014
0.0015
0.045
0.007


3463598



















rpart:3139092
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0.70
0.0009
0.55
0.85
0.78
0.65
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0.045
0.007


3463598



















rpart:3414753
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0.0009
0.55
0.85
0.78
0.65
0.53
0.0008
0.70
0.0014
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0.045
0.007


3463598



















rpart:3463598
0.70
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0.55
0.85
0.78
0.65
0.53
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0.70
0.0014
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0.045
0.007


2364325



















rpart:3463598
0.70
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0.55
0.85
0.78
0.65
0.53
0.0008
0.70
0.0014
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0.045
0.007


2512364



















rpart:3463598
0.70
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0.55
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0.65
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0.0014
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0.007


3005357



















rpart:3463598
0.70
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0.55
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0.78
0.65
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0.007


3066770



















rf:2332285
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0.0009
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0.74
0.0001
0.67
0.82
0.79
0.71
0.47
0.0001
0.76
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0.0008
0.033
0.005


3463598



















nb:2332285
0.73
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0.0007
0.0006
0.73
0.0001
0.64
0.82
0.78
0.69
0.51
0.0002
0.72
0.0012
0.0018
0.025
0.005


2512364



















svm:2512364
0.73
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0.0001
0.0002
0.73
0.0001
0.73
0.73
0.73
0.73
−0.20
0.0002
0.73
0.0006
0.0008
0.014
0.002


2364325



















knn:2364325
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0.74
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0.001


3005357



















nb:2458376
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0.91
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0.027


3066770



















nb:2461837
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0.76
0.70
0.64
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0.005


2364325



















nb:3414753
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0.0178
0.39
0.88
0.76
0.59
0.50
0.0043
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2651515



















nb:3463598
0.73
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0.003


3005357



















nb:2332285
0.73
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0.68
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0.018


3066770



















nb:2478155
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0.70
0.70
0.70
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0.005


2461837



















nb:2364325
0.73
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0.88
0.81
0.64
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0.007


3066770



















svm:2332285
0.73
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0.65
0.0093
0.70
0.61
0.64
0.67
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0.0239
0.72
0.0038
0.0019
0.254
0.029


2461837



















rpart:2332285
0.72
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0.0178
0.70
0.58
0.62
0.66
0.55
0.0376
0.71
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0.073
0.016


2478155



















knn:2512364
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0.55
0.79
0.72
0.63
0.56
0.0057
0.71
0.0014
0.0016
0.039
0.004


3066770



















knn:2458376
0.73
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0.0001
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0.0001
0.55
0.91
0.86
0.67
0.53
0.0002
0.73
0.0004
0.0005
0.127
0.007


3463598



















rf:3463598
0.73
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0.0053
0.0006
0.65
0.0093
0.55
0.76
0.69
0.63
0.57
0.0172
0.74
0.0018
0.0015
0.004
0.001


3005357



















svm:3066770
0.73
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0.0019
0.0007
0.67
0.0046
0.58
0.76
0.70
0.64
0.12
0.0058
0.77
0.0014
0.0016
0.003
0.002


3005357



















nb:3139092
0.73
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0.0019
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0.68
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0.64
0.73
0.70
0.67
0.48
0.0021
0.75
0.0012
0.0019
0.004
0.002


2512364



















knn:2364325
0.73
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0.0022
0.0004
0.70
0.0009
0.48
0.91
0.84
0.64
0.55
0.0001
0.73
0.0003
0.0016
0.004
0.002


3066770



















rf:2478155
0.73
0.0013
0.0053
0.0009
0.67
0.0046
0.67
0.67
0.67
0.67
0.44
0.0106
0.71
0.0026
0.0021
0.015
0.002


2789391



















svm:3414753
0.73
0.0013
0.0048
0.0010
0.71
0.0004
0.64
0.79
0.75
0.68
−0.01
0.0004
0.73
0.0028
0.0020
0.030
0.006


2332285



















nb:2458376
0.73
0.0014
0.0019
0.0013
0.68
0.0021
0.58
0.79
0.73
0.65
0.40
0.0042
0.73
0.0030
0.0053
0.195
0.024


2651515



















rpart:2512364
0.70
0.0014
0.0119
0.0010
0.70
0.0009
0.76
0.64
0.68
0.72
0.48
0.0025
0.69
0.0041
0.0018
0.057
0.006


2364325



















svm:2512364
0.72
0.0015
0.0048
0.0020
0.71
0.0004
0.67
0.76
0.73
0.69
0.18
0.0004
0.73
0.0039
0.0037
0.034
0.004


3066770



















rf:2332285
0.73
0.0015
0.0022
0.0006
0.71
0.0004
0.64
0.79
0.75
0.68
0.50
0.0003
0.74
0.0012
00015
0.016
0.004


2364325



















knn:2789391
0.73
0.0015
0.0255
0.0043
0.65
0.0093
0.52
0.79
0.71
0.62
0.50
0.0081
0.68
0.0057
0.0067
0.007
0.003


2364325



















rpart:2332285
0.70
0.0015
0.0119
0.0010
0.70
0.0009
0.73
0.67
0.69
0.71
0.51
0.0010
0.72
0.0019
0.0019
0.002
0.002


2364325



















rpart:2364325
0.70
0.0015
0.0119
0.0010
0.70
0.0009
0.73
0.67
0.69
0.71
0.51
0.0010
0.72
0.0019
0.0019
0.002
0.002


2956442



















rpart:2364325
0.70
0.0015
0.0119
0.0010
0.70
0.0009
0.73
0.67
0.69
0.71
0.51
0.0010
0.72
0.0019
0.0019
0.002
0.002


3066770



















nb:2478155
0.72
0.0015
0.0048
0.0006
0.67
0.0046
0.55
0.79
0.72
0.63
0.51
0.0065
0.71
0.0007
0.0018
0.009
0.006


3463598



















svm:3139092
0.72
0.0015
0.0019
0.0073
0.64
0.0178
0.73
0.55
0.62
0.67
−0.03
0.0238
0.77
0.0078
0.0106
0.001
0.001


2956442



















rf:2458376
0.73
0.0015
0.0255
0.0012
0.67
0.0046
0.55
0.79
0.72
0.63
0.58
0.0092
0.75
0.0044
0.0025
0.051
0.004


3414753



















knn:2332285
0.72
0.0016
0.0119
0.0034
0.67
0.0046
0.42
0.91
0.82
0.61
0.64
0.0014
0.75
0.0047
0.0066
0.074
0.010


3463598



















knn:3463598
0.72
0.0016
0.0053
0.0014
0.65
0.0093
0.42
0.88
0.78
0.60
0.59
0.0201
0.73
0.0041
0.0035
0.174
0.011


2512364



















knn:3463598
0.73
0.0016
0.0022
0.0006
0.68
0.0021
0.55
0.82
0.75
0.64
0.53
0.0027
0.76
0.0017
0.0016
0.012
0.002


2364325



















nb:3326487
0.72
0.0016
0.0048
0.0056
0.56
0.1945
0.30
0.82
0.63
0.54
0.50
0.2816
0.74
0.0023
0.0105
0.018
0.019


3005357



















svm:2458376
0.72
0.0016
0.0002
0.0025
0.71
0.0004
0.61
0.82
0.77
0.68
0.10
0.0007
0.70
0.0036
0.0051
0.127
0.004


2512364



















svm:2458376
0.72
0.0016
0.0048
0.0009
0.70
0.0009
0.64
0.76
0.72
0.68
−0.18
0.0043
0.73
0.0028
0.0022
0.095
0.009


2651515



















rf:2458376
0.73
0.0017
0.0009
0.0003
0.74
0.0001
0.55
0.94
0.90
0.67
0.63
0.0000
0.74
0.0011
0.0011
0.052
0.005


3463598



















nb:2332285
0.72
0.0017
0.0007
0.0016
0.74
0.0001
0.67
0.82
0.79
0.71
0.47
0.0001
0.73
0.0028
0.0038
0.056
0.014


3463598



















nb:2364325
0.72
0.0018
0.0113
0.0012
0.64
0.0178
0.45
0.82
0.71
0.60
0.48
0.0152
0.75
0.0012
0.0037
0.036
0.006


2651515



















nb:3463598
0.72
0.0018
0.0002
0.0011
0.73
0.0001
0.64
0.82
0.78
0.69
0.52
0.0002
0.72
0.0018
0.0026
0.031
0.006


2512364



















svm:3139092
0.72
0.0018
0.0048
0.0009
0.70
0.0009
0.73
0.67
0.69
0.71
0.19
0.0008
0.77
0.0015
0.0023
0.000
0.001


3005357



















knn:2458376
0.72
0.0018
0.0053
0.0003
0.68
0.0021
0.48
0.88
0.80
0.63
0.55
0.0018
0.72
0.0017
0.0011
0.125
0.006


2512364



















rf:2478155
0.72
0.0019
0.0022
0.0001
0.71
0.0004
0.70
0.73
0.72
0.71
0.66
0.0003
0.76
0.0005
0.0004
0.001
0.001


3005357



















knn:2478155
0.72
0.0019
0.0255
0.0012
0.65
0.0093
0.70
0.61
0.64
0.67
0.50
0.0176
0.71
0.0043
0.0030
0.003
0.001


3139092



















knn:3414753
0.72
0.0019
0.0119
0.0008
0.70
0.0009
0.58
0.82
0.76
0.66
0.50
0.0007
0.72
0.0011
0.0020
0.015
0.005


2789391



















nb:2461837
0.72
0.0019
0.0019
0.0037
0.65
0.0093
0.58
0.73
0.68
0.63
0.46
0.0088
0.72
0.0042
0.0057
0.008
0.005


3005357



















nb:3139092
0.72
0.0019
0.0019
0.0032
0.64
0.0178
0.48
0.79
0.70
0.60
0.49
0.0117
0.74
0.0030
0.0059
0.008
0.008


3066770



















svm:3414753
0.72
0.0019
0.0113
0.0016
0.68
0.0021
0.76
0.61
0.66
0.71
−0.01
0.0045
0.78
0.0043
0.0029
0.006
0.002


3139092



















knn:2461837
0.72
0.0020
0.0022
0.0005
0.73
0.0001
0.76
0.70
0.71
0.74
0.44
0.0005
0.69
0.0014
0.0012
0.002
0.001


3005357



















rf:3463598
0.72
0.0020
0.0022
0.0005
0.70
0.0009
0.58
0.82
0.76
0.66
0.57
0.0013
0.75
0.0015
0.0014
0.032
0.003


2364325



















svm:2364325
0.72
0.0021
0.0019
0.0008
0.70
0.0009
0.52
0.88
0.81
0.64
0.17
0.0001
0.73
0.0013
0.0019
0.015
0.005


3066770



















rpart:2458376
0.71
0.0021
0.0511
0.0014
0.67
0.0046
0.73
0.61
0.65
0.69
0.39
0.0144
0.72
0.0018
0.0029
0.048
0.007


2651515



















knn:2458376
0.72
0.0022
0.0255
0.0013
0.68
0.0021
0.64
0.73
0.70
0.67
0.50
0.0035
0.70
0.0047
0.0033
0.302
0.019


3066770



















nb:2478155
0.72
0.0022
0.0113
0.0023
0.64
0.0178
0.45
0.82
0.71
0.60
0.49
0.0097
0.69
0.0015
0.0047
0.008
0.004


2789391



















rpart:2458376
0.71
0.0023
0.0119
0.0093
0.64
0.0178
0.55
0.73
0.67
0.62
0.57
0.0222
0.70
0.0115
0.0118
0.017
0.003


2956442



















rf:3066770
0.72
0.0023
0.0022
0.0010
0.67
0.0046
0.64
0.70
0.68
0.66
0.53
0.0051
0.75
0.0013
0.0021
0.002
0.002


3005357



















knn:2956442
0.72
0.0023
0.0255
0.0073
0.62
0.0320
0.52
0.73
0.65
0.60
0.47
0.0407
0.68
0.0101
0.0108
0.029
0.005


2651515



















knn:2478155
0.72
0.0023
0.0053
0.0004
0.71
0.0004
0.55
0.88
0.82
0.66
0.52
0.0001
0.71
0.0007
0.0014
0.033
0.002


2651515



















nb:3326487
0.71
0.0024
0.0505
0.0030
0.59
0.0876
0.36
0.82
0.67
0.56
0.48
0.1071
0.70
0.0009
0.0076
0.024
0.026


2478155



















svm:2332285
0.71
0.0024
0.0002
0.0002
0.74
0.0001
0.67
0.82
0.79
0.71
−0.19
0.0001
0.71
0.0009
0.0006
0.022
0.003


3463598



















rf:2789391
0.72
0.0025
0.0511
0.0038
0.65
0.0093
0.39
0.91
0.81
0.60
0.56
0.0017
0.70
0.0033
0.0074
0.094
0.026


2651515



















knn:3414753
0.71
0.0026
0.0255
0.0032
0.65
0.0093
0.48
0.82
0.73
0.61
0.55
0.0048
0.71
0.0032
0.0055
0.018
0.010


3066770



















knn:2789391
0.71
0.0026
0.0053
0.0018
0.67
0.0046
0.48
0.85
0.76
0.62
0.51
0.0020
0.72
0.0012
0.0041
0.005
0.004


3066770



















rpart:2478155
0.68
0.0028
0.0255
0.0021
0.68
0.0021
0.79
0.58
0.65
0.73
0.44
0.0020
0.71
0.0037
0.0034
0.000
0.001


3005357



















rpart:2956442
0.68
0.0028
0.0255
0.0021
0.68
0.0021
0.79
0.58
0.65
0.73
0.44
0.0020
0.71
0.0037
0.0034
0.000
0.001


3005357



















rpart:3139092
0.68
0.0028
0.0255
0.0021
0.68
0.0021
0.79
0.58
0.65
0.73
0.44
0.0020
0.71
0.0037
0.0034
0.000
0.001


3005357



















nb:3414753
0.71
0.0028
0.0048
0.0012
0.67
0.0046
0.55
0.79
0.72
0.63
0.47
0.0054
0.74
0.0009
0.0031
0.034
0.013


3066770



















nb:2789391
0.71
0.0029
0.0048
0.0031
0.67
0.0046
0.64
0.70
0.68
0.66
0.45
0.0055
0.73
0.0022
0.0054
0.004
0.003


3005357



















knn:3139092
0.71
0.0030
0.0119
0.0029
0.67
0.0046
0.73
0.61
0.65
0.69
0.47
0.0090
0.73
0.0059
0.0048
0.012
0.004


3463598



















nb:2332285
0.71
0.0032
0.0019
0.0035
0.68
0.0021
0.58
0.79
0.73
0.65
0.48
0.0036
0.71
0.0038
0.0064
0.034
0.014


2789391



















nb:3326487
0.71
0.0032
0.0048
0.0076
0.58
0.1339
0.42
0.73
0.61
0.56
0.44
0.2432
0.71
0.0032
0.0146
0.094
0.068


3414753



















svm:3139092
0.71
0.0032
0.0048
0.0033
0.67
0.0046
0.67
0.67
0.67
0.67
−0.02
0.0076
0.72
0.0064
0.0056
0.005
0.003


3066770



















knn:2332285
0.71
0.0032
0.0053
0.0021
0.65
0.0093
0.52
0.79
0.71
0.62
0.53
0.0115
0.70
0.0031
0.0038
0.021
0.006


2789391



















rf:2789391
0.71
0.0032
0.0053
0.0062
0.61
0.0544
0.55
0.67
0.62
0.59
0.45
0.0582
0.71
0.0107
0.0088
0.018
0.004


2364325



















nb:2461837
0.71
0.0033
0.0113
0.0027
0.65
0.0093
0.67
0.64
0.65
0.66
0.41
0.0120
0.72
0.0028
0.0059
0.080
0.013


2651515



















nb:3463598
0.71
0.0033
0.0048
0.0013
0.70
0.0009
0.61
0.79
0.74
0.67
0.50
0.0011
0.72
0.0018
0.0029
0.011
0.006


2364325



















rf:2461837
0.71
0.0035
0.0119
0.0018
0.68
0.0021
0.61
0.76
0.71
0.66
0.54
0.0031
0.70
0.0039
0.0031
0.008
0.002


2364325



















rf:2789391
0.71
0.0035
0.0053
0.0024
0.70
0.0009
0.82
0.58
0.66
0.76
0.34
0.0012
0.73
0.0040
0.0043
0.002
0.001


3005357



















nb:3326487
0.71
0.0036
0.0247
0.0036
0.59
0.0876
0.27
0.91
0.75
0.56
0.55
0.0518
0.72
0.0015
0.0081
0.023
0.029


2364325



















rf:2458376
0.71
0.0037
0.0119
0.0027
0.64
0.0178
0.79
0.48
0.60
0.70
0.48
0.0533
0.70
0.0113
0.0051
0.091
0.010


2478155



















rf:3463598
0.71
0.0037
0.0053
0.0034
0.70
0.0009
0.76
0.64
0.68
0.72
0.47
0.0027
0.69
0.0095
0.0054
0.125
0.015


2461837



















nb:2458376
0.71
0.0038
0.0007
0.0013
0.67
0.0046
0.48
0.85
0.76
0.62
0.49
0.0038
0.71
0.0026
0.0038
0.081
0.017


2789391



















rf:2458376
0.71
0.0038
0.0053
0.0010
0.70
0.0009
0.55
0.85
0.78
0.65
0.53
0.0013
0.70
0.0028
0.0024
0.024
0.003


2789391



















rf:3463598
0.71
0.0038
0.0053
0.0022
0.65
0.0093
0.70
0.61
0.64
0.67
0.43
0.0229
0.71
0.0071
0.0038
0.119
0.014


2956442



















knn:3139092
0.71
0.0038
0.0053
0.0031
0.67
0.0046
0.64
0.70
0.68
0.66
0.54
0.0056
0.72
0.0060
0.0048
0.002
0.002


2364325



















knn:3005357
0.70
0.0039
0.0119
0.0047
0.58
0.1339
0.42
0.73
0.61
0.56
0.50
0.1856
0.74
0.0055
0.0078
0.023
0.006


2651515



















rf:2478155
0.71
0.0039
0.0053
0.0013
0.67
0.0046
0.79
0.55
0.63
0.72
0.55
0.0091
0.70
0.0044
0.0030
0.012
0.002


3139092



















nb:2332285
0.70
0.0039
0.0007
0.0019
0.70
0.0009
0.67
0.73
0.71
0.69
0.46
0.0035
0.73
0.0022
0.0039
0.023
0.012


2461837



















rf:2332285
0.71
0.0040
0.0022
0.0095
0.61
0.0544
0.70
0.52
0.59
0.63
0.37
0.1214
0.67
0.0182
0.0122
0.126
0.027


2461837



















rf:2332285
0.71
0.0040
0.0022
0.0032
0.70
0.0009
0.82
0.58
0.66
0.76
0.39
0.0019
0.73
0.0060
0.0054
0.011
0.003


3139092



















rpart:2332285
0.70
0.0042
0.0255
0.0129
0.64
0.0178
0.58
0.70
0.66
0.62
0.44
0.0060
0.72
0.0043
0.0154
0.002
0.003


3005357



















knn:2478155
0.70
0.0042
0.0119
0.0009
0.68
0.0021
0.91
0.45
0.63
0.83
0.45
0.0041
0.70
0.0055
0.0028
0.039
0.006


2461837



















nb:3066770
0.70
0.0043
0.0113
0.0023
0.64
0.0178
0.30
0.97
0.91
0.58
0.54
0.0004
0.70
0.0018
0.0073
0.106
0.018


2651515



















svm:3005357
0.70
0.0043
0.0505
0.0095
0.65
0.0093
0.55
0.76
0.69
0.63
−0.36
0.0078
0.72
0.0056
0.0147
0.045
0.008


2651515



















svm:3326487
0.70
0.0043
0.0113
0.0094
0.56
0.1945
0.39
0.73
0.59
0.55
−0.21
0.3468
0.70
0.0053
0.0149
0.075
0.110


2332285



















rf:3463598
0.70
0.0043
0.0255
0.0010
0.68
0.0021
0.45
0.91
0.83
0.63
0.61
0.0014
0.71
0.0028
0.0030
0.252
0.015


2512364



















rpart:3414753
0.69
0.0045
0.0255
0.0018
0.68
0.0021
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0.015


2461837



















nb:2461837
0.70
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0.0022
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0.73
0.72
0.71
0.46
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0.005


2512364



















nb:3326487
0.70
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0.0043
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0.1945
0.33
0.79
0.61
0.54
0.50
0.3390
0.69
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0.047
0.028


2512364



















nb:3414753
0.70
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0.0020
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0.73
0.71
0.69
0.45
0.0022
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0.030
0.010


2461837



















knn:2478155
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0.61
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0.0687
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0.0083
0.0055
0.016
0.002


3066770



















knn:3139092
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0.63
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0.0066
0.0060
0.004
0.004


3066770



















knn:3414753
0.70
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0.61
0.76
0.71
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0.48
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0.010
0.003


2364325



















nb:2789391
0.70
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0.0247
0.0033
0.67
0.0046
0.64
0.70
0.68
0.66
0.44
0.0045
0.73
0.0032
0.0059
0.009
0.006


2364325



















nb:3414753
0.70
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0.0048
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0.70
0.0009
0.61
0.79
0.74
0.67
0.49
0.0026
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0.0014
0.0032
0.050
0.014


3463598



















knn:2478155
0.70
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0.76
0.68
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0.0248
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0.005


2956442



















knn:3139092
0.70
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0.88
0.55
0.66
0.82
0.41
0.0005
0.73
0.0015
0.0030
0.000
0.002


3005357



















svm:3414753
0.70
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0.0048
0.0018
0.71
0.0004
0.67
0.76
0.73
0.69
−0.07
0.0010
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0.006


3463598



















knn:2461837
0.70
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0.82
0.75
0.64
0.59
0.0006
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0.0051
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0.005
0.004


2364325



















rpart:3326487
0.68
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0.0966
0.0038
0.65
0.0093
0.76
0.55
0.63
0.69
0.41
0.0259
0.69
0.0044
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0.054
0.009


2458376



















nb:2458376
0.70
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0.0013
0.70
0.0009
0.61
0.79
0.74
0.67
0.45
0.0043
0.69
0.0023
0.0033
0.093
0.021


2461837



















rf:3414753
0.70
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0.0255
0.0034
0.65
0.0093
0.55
0.76
0.69
0.63
0.53
0.0146
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0.003


3005357



















knn:2512364
0.70
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0.42
0.85
0.74
0.60
0.70
0.0117
0.69
0.0149
0.0101
0.111
0.016


2364325



















knn:2458376
0.70
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0.76
0.69
0.63
0.53
0.0210
0.69
0.0058
0.0038
0.046
0.008


2956442



















rf:2789391
0.70
0.0054
0.0119
0.0024
0.65
0.0093
0.52
0.79
0.71
0.62
0.50
0.0081
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0.0039
0.0041
0.024
0.007


3463598



















nb:2458376
0.70
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0.0019
0.0008
0.70
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0.42
0.97
0.93
0.63
0.54
0.0003
0.71
0.0018
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0.138
0.026


3463598



















nb:2789391
0.70
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0.70
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0.70
0.70
0.70
0.70
0.45
0.0020
0.69
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0.0052
0.017
0.004


2512364



















svm:2364325
0.70
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0.0055
0.64
0.0178
0.48
0.79
0.70
0.60
0.04
0.0239
0.72
0.0090
0.0080
0.018
0.005


2956442



















svm:2789391
0.70
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0.0097
0.67
0.0046
0.58
0.76
0.70
0.64
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0.0072
0.66
0.0165
0.0138
0.150
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2512364



















knn:2512364
0.69
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0.76
0.71
0.66
0.50
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0.0041
0.0063
0.122
0.027


2651515



















svm:3139092
0.70
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0.0247
0.0338
0.67
0.0046
0.82
0.52
0.63
0.74
0.01
0.0075
0.72
0.0377
0.0403
0.127
0.024


3463598



















rf:2478155
0.70
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0.0026
0.65
0.0093
0.79
0.52
0.62
0.71
0.38
0.0102
0.69
0.0073
0.0045
0.115
0.009


3066770



















rf:2364325
0.70
0.0059
0.0053
0.0046
0.68
0.0021
0.58
0.79
0.73
0.65
0.54
0.0017
0.73
0.0056
0.0069
0.013
0.005


2956442



















nb:3139092
0.70
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0.0055
0.67
0.0046
0.61
0.73
0.69
0.65
0.46
0.0060
0.71
0.0069
0.0082
0.010
0.007


2461837



















svm:2332285
0.70
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0.67
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0.58
0.76
0.70
0.64
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0.71
0.0018
0.0043
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0.014


2651515



















svm:2789391
0.70
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0.64
0.67
0.66
0.65
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2364325



















knn:2789391
0.70
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0.45
0.82
0.71
0.60
0.51
0.0131
0.64
0.0165
0.0163
0.069
0.010


2651515



















rf:2478155
0.70
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0.0119
0.0029
0.68
0.0021
0.79
0.58
0.65
0.73
0.44
0.0048
0.71
0.0078
0.0051
0.057
0.005


2956442



















rf:2332285
0.70
0.0063
0.0053
0.0039
0.65
0.0093
0.48
0.82
0.73
0.61
0.54
0.0054
0.68
0.0062
0.0063
0.035
0.007


2789391



















rpart:2458376
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0.76
0.58
0.64
0.70
0.48
0.0151
0.66
0.0193
0.0072
0.042
0.004


2332285



















rpart:2458376
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0.76
0.58
0.64
0.70
0.48
0.0151
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0.0193
0.0072
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0.004


2364325



















rpart:2458376
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2478155



















rpart:2458376
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2789391



















rpart:2458376
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0.64
0.70
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3005357



















rpart:2458376
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0.76
0.58
0.64
0.70
0.48
0.0151
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0.0193
0.0072
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3066770



















rpart:2458376
0.67
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0.64
0.70
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3139092



















nb:2332285
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0.72
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0.019


2956442



















rf:3139092
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0.0093
0.73
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0.63
0.68
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3463598



















knn:2458376
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0.0693
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0.014


2461837



















nb:3139092
0.69
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0.75
0.64
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0.69
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2789391



















nb:3326487
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0.1945
0.30
0.82
0.63
0.54
0.47
0.2595
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0.0067
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0.107
0.144


3066770



















svm:2478155
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0.73
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0.68
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0.0132
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3463598



















svm:3326487
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3005357



















knn:2461837
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2512364



















knn:2512364
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3005357



















nb:3414753
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2789391



















nb:3139092
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0.73
0.70
0.67
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3463598



















rf:2364325
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0.76
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0.71
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0.001


3005357



















rpart:2458376
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0.67
0.67
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0.012


2461837



















rpart:2461837
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0.67
0.67
0.67
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0.0079
0.038
0.012


2364325



















rpart:2461837
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0.67
0.67
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0.012


2956442



















rpart:2461837
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0.67
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0.012


3005357



















rpart:2478155
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0.67
0.67
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0.012


2461837



















rpart:2789391
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0.67
0.67
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0.012


2461837



















rpart:3139092
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0.67
0.67
0.67
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0.012


2461837



















rpart:3326487
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0.67
0.67
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0.012


2461837



















rpart:3463598
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0.67
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0.012


2461837



















knn:2332285
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0.73
0.70
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3005357



















rf:3005357
0.69
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0.0075
0.65
0.0093
0.61
0.70
0.67
0.64
0.45
0.0103
0.73
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2651515



















svm:2458376
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0.58
0.67
0.63
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2478155



















knn:2478155
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0.71
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0.0207
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3463598



















knn:2458376
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0.70
0.68
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0.0174
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2332285



















rf:2458376
0.69
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0.0044
0.65
0.0093
0.39
0.91
0.81
0.60
0.55
0.0017
0.70
0.0039
0.0083
0.127
0.031


2651515



















rf:2789391
0.69
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0.0053
0.0031
0.70
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0.67
0.73
0.71
0.69
0.45
0.0019
0.68
0.0056
0.0049
0.027
0.004


2512364



















rf:3326487
0.69
0.0079
0.0255
0.0042
0.58
0.1339
0.27
0.88
0.69
0.55
0.60
0.1299
0.73
0.0028
0.0079
0.030
0.021


2364325



















svm:3414753
0.69
0.0080
0.0247
0.0078
0.65
0.0093
0.55
0.76
0.69
0.63
−0.17
0.0108
0.72
0.0085
0.0115
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0.009


2956442



















knn:2332285
0.69
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0.67
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0.71
0.69
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2364325



















knn:2332285
0.69
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0.64
0.82
0.78
0.69
0.55
0.0002
0.72
0.0051
0.0039
0.135
0.015


2512364



















rf:2956442
0.69
0.0082
0.0053
0.0098
0.64
0.0178
0.64
0.64
0.64
0.64
0.46
0.0233
0.71
0.0135
0.0124
0.004
0.002


3005357



















svm:3326487
0.69
0.0083
0.0505
0.0184
0.58
0.1339
0.39
0.76
0.62
0.56
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0.2183
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0.0141
0.0241
0.121
0.127


2364325



















knn:3414753
0.69
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0.0092
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0.0544
0.67
0.55
0.59
0.62
0.45
0.1123
0.70
0.0156
0.0124
0.198
0.020


2478155



















rpart:3066770
0.67
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0.0255
0.0067
0.64
0.0178
0.67
0.61
0.63
0.65
0.56
0.0238
0.69
0.0093
0.0087
0.001
0.002


3005357



















rf:2458376
0.69
0.0086
0.0511
0.0054
0.67
0.0046
0.64
0.70
0.68
0.66
0.50
0.0122
0.69
0.0154
0.0077
0.045
0.005


2956442



















nb:2364325
0.69
0.0086
0.0048
0.0084
0.67
0.0046
0.55
0.79
0.72
0.63
0.50
0.0051
0.71
0.0106
0.0115
0.020
0.007


2956442



















svm:3414753
0.69
0.0086
0.0113
0.0062
0.68
0.0021
0.70
0.67
0.68
0.69
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0.011


2789391



















rf:2461837
0.69
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0.0053
0.0040
0.65
0.0093
0.64
0.67
0.66
0.65
0.46
0.0114
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0.006
0.002


3005357



















rpart:2332285
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0.0178
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0.91
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0.118
0.048


2651515



















rpart:2364325
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0.91
0.80
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0.118
0.048


2651515



















rpart:2478155
0.64
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0.80
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0.048


2651515



















rpart:2512364
0.64
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0.048


2651515



















rpart:2789391
0.64
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0.118
0.048


2651515



















rpart:2956442
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0.91
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0.118
0.048


2651515



















rpart:3005357
0.64
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0.36
0.91
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0.118
0.048


2651515



















rpart:3066770
0.64
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0.36
0.91
0.80
0.59
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0.118
0.048


2651515



















rpart:3326487
0.64
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0.118
0.048


2651515



















rpart:3414753
0.64
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0.36
0.91
0.80
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0.56
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0.118
0.048


2651515



















rpart:3463598
0.64
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0.36
0.91
0.80
0.59
0.56
0.0018
0.67
0.0029
0.0135
0.118
0.048


2651515



















rf:2478155
0.69
0.0091
0.0053
0.0159
0.59
0.0876
0.70
0.48
0.58
0.62
0.43
0.2117
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0.0253
0.0193
0.379
0.044


2512364



















knn:3414753
0.69
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0.74
0.67
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0.0026
0.73
0.0056
0.0027
0.128
0.009


3463598



















knn:2332285
0.69
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0.71
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0.76
0.73
0.69
0.50
0.0005
0.75
0.0030
0.0024
0.007
0.003


3139092



















rf:2956442
0.69
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0.0255
0.0047
0.62
0.0320
0.30
0.94
0.83
0.57
0.58
0.0085
0.70
0.0036
0.0091
0.127
0.040


2651515



















rf:2478155
0.69
0.0092
0.0255
0.0038
0.67
0.0046
0.61
0.73
0.69
0.65
0.64
0.0098
0.64
0.0114
0.0062
0.075
0.009


2461837



















rf:2458376
0.69
0.0092
0.0255
0.0125
0.61
0.0544
0.48
0.73
0.64
0.59
0.55
0.0825
0.67
0.0291
0.0166
0.297
0.021


3066770



















svm:3463598
0.69
0.0093
0.0048
0.0025
0.71
0.0004
0.58
0.85
0.79
0.67
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0.0004
0.69
0.0013
0.0057
0.027
0.026


3066770



















knn:2364325
0.68
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0.33
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0.85
0.58
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0.0004
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0.0203
0.023
0.035


2651515



















nb:2461837
0.68
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0.64
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0.52
0.76
0.68
0.61
0.48
0.0092
0.68
0.0057
0.0097
0.045
0.026


3066770



















rf:3414753
0.69
0.0098
0.0022
0.0018
0.68
0.0021
0.64
0.73
0.70
0.67
0.52
0.0043
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0.018
0.004


2364325



















knn:2364325
0.68
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0.0255
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0.76
0.69
0.63
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0.0128
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0.0124
0.0098
0.010
0.004


2956442



















knn:3139092
0.68
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0.60
0.70
0.44
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0.0142
0.0169
0.002
0.002


2956442



















knn:3139092
0.68
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0.68
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0.61
0.76
0.71
0.66
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0.0057
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0.009
0.004


2789391



















knn:2789391
0.68
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0.76
0.69
0.63
0.50
0.0097
0.69
0.0091
0.0109
0.037
0.009


2461837



















nb:3326487
0.68
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0.0247
0.0042
0.68
0.0021
0.42
0.94
0.88
0.62
0.49
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0.0033
0.0099
0.169
0.098


2458376



















nb:2789391
0.68
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0.0062
0.64
0.0178
0.52
0.76
0.68
0.61
0.44
0.0136
0.69
0.0050
0.0118
0.084
0.012


2651515



















nb:3326487
0.68
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0.0876
0.45
0.73
0.63
0.57
0.43
0.1452
0.71
0.0060
0.0202
0.030
0.041


3139092



















svm:3326487
0.68
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0.0247
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0.61
0.0544
0.48
0.73
0.64
0.59
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0.1575
0.66
0.0134
0.0092
0.224
0.081


2458376



















rpart:3326487
0.66
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0.0083
0.64
0.0178
0.70
0.58
0.62
0.66
0.41
0.0263
0.69
0.0038
0.0121
0.021
0.007


3139092



















rf:2789391
0.68
0.0115
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0.0098
0.65
0.0093
0.58
0.73
0.68
0.63
0.51
0.0116
0.65
0.0105
0.0128
0.048
0.019


3066770



















nb:3414753
0.68
0.0117
0.0247
0.0100
0.65
0.0093
0.64
0.67
0.66
0.65
0.45
0.0240
0.72
0.0114
0.0135
0.057
0.012


2956442



















svm:2789391
0.68
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0.0113
0.0076
0.68
0.0021
0.58
0.79
0.73
0.65
−0.07
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0.68
0.0089
0.0108
0.045
0.013


3463598



















rf:2789391
0.68
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0.0119
0.0078
0.65
0.0093
0.64
0.67
0.66
0.65
0.47
0.0240
0.65
0.0151
0.0102
0.032
0.008


2461837



















svm:2461837
0.68
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0.71
0.0004
0.70
0.73
0.72
0.71
0.06
0.0007
0.67
0.0136
0.0104
0.017
0.005


3005357



















nb:3463598
0.68
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0.0093
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0.76
0.69
0.63
0.50
0.0103
0.67
0.0120
0.0140
0.074
0.030


2461837



















svm:3463598
0.68
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0.76
0.72
0.68
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2461837



















knn:3463598
0.68
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0.0079
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0.005


2956442



















rf:3414753
0.68
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0.67
0.67
0.67
0.67
0.42
0.0109
0.72
0.0057
0.0046
0.082
0.012


3463598



















rf:3139092
0.68
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0.64
0.0178
0.55
0.73
0.67
0.62
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0.0182
0.0173
0.017
0.003


2789391



















nb:3463598
0.68
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0.85
0.78
0.65
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0.028


3066770



















nb:2478155
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0.70
0.60
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0.0223
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2956442



















nb:2512364
0.67
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0.58
0.76
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0.64
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0.0113
0.033
0.007


2956442



















rpart:3463598
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0.67
0.52
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0.2796
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0.0556
0.0251
0.452
0.164


2956442



















rpart:2332285
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0.70
0.61
0.64
0.67
0.49
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0.0165
0.0151
0.003
0.002


3139092



















rpart:2478155
0.65
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0.70
0.61
0.64
0.67
0.49
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0.0165
0.0151
0.003
0.002


3139092



















rpart:3139092
0.65
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0.70
0.61
0.64
0.67
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0.0134
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0.0165
0.0151
0.003
0.002


2364325



















rpart:3139092
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0.64
0.67
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0.002


2789391



















rpart:3139092
0.65
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0.70
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0.67
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0.0165
0.0151
0.003
0.002


2956442



















rpart:3139092
0.65
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0.64
0.67
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0.0165
0.0151
0.003
0.002


3066770



















nb:2789391
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0.55
0.79
0.72
0.63
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0.67
0.0074
0.0129
0.038
0.015


3463598



















nb:2956442
0.67
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0.55
0.70
0.64
0.61
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0.0460
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0.0165
0.0212
0.140
0.016


2651515



















nb:2956442
0.67
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0.58
0.73
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0.005


3005357



















nb:3139092
0.67
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0.64
0.64
0.64
0.46
0.0385
0.71
0.0242
0.0242
0.014
0.006


2956442



















rf:3139092
0.67
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0.0019
0.67
0.0046
0.67
0.67
0.67
0.67
0.62
0.0043
0.73
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0.001
0.001


3005357



















nb:3139092
0.67
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0.67
0.0046
0.39
0.94
0.87
0.61
0.52
0.0001
0.70
0.0014
0.0063
0.029
0.006


2651515



















svm:2789391
0.67
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0.0093
0.67
0.0046
0.58
0.76
0.70
0.64
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0.0045
0.66
0.0079
0.0146
0.069
0.012


2651515



















svm:2789391
0.67
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0.0074
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0.61
0.79
0.74
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0.0076
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0.015


3066770



















knn:3326487
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0.0201
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2512364



















knn:3414753
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0.67
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0.0352
0.0270
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0.011


3139092



















knn:3463598
0.67
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0.88
0.73
0.57
0.70
0.0478
0.69
0.0193
0.0131
0.066
0.017


2651515



















svm:3139092
0.67
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0.65
0.0093
0.73
0.58
0.63
0.68
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0.0220
0.67
0.0344
0.0228
0.034
0.011


2461837



















svm:3463598
0.67
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0.71
0.0004
0.58
0.85
0.79
0.67
0.01
0.0004
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0.009


2364325



















knn:2478155
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0.45
0.82
0.71
0.60
0.54
0.0097
0.65
0.0293
0.0344
0.053
0.010


2789391



















rf:3414753
0.67
0.0173
0.0119
0.0101
0.68
0.0021
0.64
0.73
0.70
0.67
0.50
0.0043
0.70
0.0172
0.0128
0.045
0.011


2789391



















svm:2332285
0.67
0.0176
0.0965
0.0183
0.64
0.0178
0.45
0.82
0.71
0.60
−0.01
0.0145
0.66
0.0141
0.0226
0.045
0.017


2789391



















knn:3463598
0.67
0.0184
0.0966
0.0144
0.61
0.0544
0.39
0.82
0.68
0.57
0.58
0.0632
0.67
0.0233
0.0185
0.189
0.012


3005357



















rpart:2332285
0.66
0.0186
0.0511
0.0368
0.67
0.0046
0.61
0.73
0.69
0.65
0.59
0.0108
0.62
0.0559
0.0394
0.094
0.031


2461837



















nb:2458376
0.67
0.0189
0.0048
0.0052
0.67
0.0046
0.55
0.79
0.72
0.63
0.46
0.0096
0.68
0.0101
0.0086
0.130
0.024


2956442



















nb:2789391
0.67
0.0189
0.0048
0.0090
0.67
0.0046
0.61
0.73
0.69
0.65
0.44
0.0053
0.68
0.0061
0.0131
0.035
0.021


3066770



















svm:2478155
0.67
0.0189
0.0505
0.0079
0.61
0.0544
0.55
0.67
0.62
0.59
−0.13
0.0894
0.68
0.0048
0.0120
0.017
0.009


2789391



















rf:2364325
0.67
0.0192
0.0966
0.0067
0.64
0.0178
0.36
0.91
0.80
0.59
0.73
0.0018
0.68
0.0036
0.0113
0.163
0.064


2651515



















svm:3326487
0.67
0.0196
0.0113
0.0285
0.56
0.1945
0.36
0.76
0.60
0.54
−0.35
0.3833
0.66
0.0144
0.0364
0.140
0.252


3066770



















svm:3463598
0.67
0.0196
0.0019
0.0040
0.71
0.0004
0.61
0.82
0.77
0.68
0.02
0.0009
0.66
0.0088
0.0064
0.193
0.021


2512364



















rf:3414753
0.67
0.0196
0.0255
0.0047
0.64
0.0178
0.64
0.64
0.64
0.64
0.35
0.0288
0.71
0.0042
0.0075
0.134
0.035


2651515



















knn:2332285
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0.0208
0.0053
0.0166
0.65
0.0093
0.52
0.79
0.71
0.62
0.53
0.0164
0.68
0.0250
0.0197
0.072
0.016


2956442



















rf:3414753
0.67
0.0210
0.0511
0.0122
0.65
0.0093
0.52
0.79
0.71
0.62
0.58
0.0112
0.70
0.0175
0.0150
0.140
0.028


2332285



















svm:2512364
0.66
0.0210
0.0505
0.0122
0.67
0.0046
0.58
0.76
0.70
0.64
0.04
0.0076
0.67
0.0155
0.0153
0.036
0.008


2956442



















knn:3326487
0.66
0.0211
0.0255
0.0347
0.58
0.1339
0.24
0.91
0.73
0.55
0.61
0.0682
0.67
0.0278
0.0406
0.195
0.111


2364325



















rf:3414753
0.67
0.0213
0.0255
0.0161
0.64
0.0178
0.55
0.73
0.67
0.62
0.50
0.0296
0.71
0.0224
0.0193
0.065
0.015


2956442



















rf:3326487
0.66
0.0217
0.0966
0.0086
0.64
0.0178
0.33
0.94
0.85
0.58
0.60
0.0033
0.67
0.0091
0.0134
0.136
0.051


2458376



















knn:2461837
0.66
0.0224
0.1717
0.0361
0.55
0.2693
0.30
0.79
0.59
0.53
0.64
0.4552
0.67
0.0563
0.0414
0.273
0.108


3066770



















svm:3463598
0.66
0.0225
0.0247
0.0099
0.64
0.0178
0.48
0.79
0.70
0.60
0.02
0.0216
0.68
0.0162
0.0131
0.060
0.011


2956442



















rpart:3139092
0.66
0.0226
0.1717
0.0219
0.62
0.0320
0.64
0.61
0.62
0.63
0.45
0.0407
0.70
0.0147
0.0255
0.161
0.032


2651515



















rf:2789391
0.66
0.0228
0.0511
0.0179
0.61
0.0544
0.52
0.70
0.63
0.59
0.48
0.0666
0.65
0.0252
0.0213
0.040
0.011


2956442



















knn:3066770
0.66
0.0233
0.0255
0.0143
0.59
0.0876
0.48
0.70
0.62
0.58
0.49
0.1126
0.69
0.0163
0.0178
0.028
0.008


2956442



















knn:2332285
0.66
0.0234
0.0119
0.0041
0.67
0.0046
0.55
0.79
0.72
0.63
0.52
0.0047
0.71
0.0048
0.0063
0.044
0.014


3066770



















rpart:2458376
0.66
0.0236
0.0255
0.0083
0.62
0.0320
0.61
0.64
0.63
0.62
0.50
0.0760
0.65
0.0227
0.0109
0.441
0.026


2512364



















nb:3326487
0.66
0.0241
0.0505
0.0173
0.58
0.1339
0.24
0.91
0.73
0.55
0.57
0.0682
0.69
0.0078
0.0254
0.123
0.139


3463598



















svm:2478155
0.66
0.0241
0.0505
0.0126
0.59
0.0876
0.42
0.76
0.64
0.57
−0.18
0.1125
0.68
0.0107
0.0177
0.142
0.017


2651515



















rf:2461837
0.66
0.0244
0.0966
0.0244
0.65
0.0093
0.55
0.76
0.69
0.63
0.53
0.0099
0.63
0.0335
0.0282
0.273
0.069


2651515



















rf:2512364
0.66
0.0244
0.0119
0.0152
0.62
0.0320
0.61
0.64
0.63
0.62
0.53
0.0618
0.67
0.0164
0.0185
0.276
0.053


2364325



















svm:2332285
0.66
0.0250
0.0247
0.0927
0.62
0.0320
0.55
0.70
0.64
0.61
−0.14
0.0552
0.65
0.1287
0.1055
0.453
0.253


2478155



















svm:2458376
0.66
0.0250
0.0048
0.0046
0.67
0.0046
0.48
0.85
0.76
0.62
0.15
0.0068
0.64
0.0159
0.0076
0.375
0.036


3463598



















svm:2461837
0.66
0.0250
0.1729
0.0091
0.61
0.0544
0.64
0.58
0.60
0.61
−0.50
0.0681
0.68
0.0067
0.0146
0.117
0.021


2651515



















knn:3326487
0.66
0.0254
0.0255
0.0187
0.65
0.0093
0.55
0.76
0.69
0.63
0.48
0.0115
0.68
0.0171
0.0225
0.024
0.010


3139092



















knn:3414753
0.66
0.0258
0.0255
0.0131
0.64
0.0178
0.55
0.73
0.67
0.62
0.50
0.0245
0.68
0.0176
0.0160
0.041
0.010


2956442



















rpart:2332285
0.64
0.0258
0.1717
0.0242
0.64
0.0178
0.55
0.73
0.67
0.62
0.50
0.0278
0.61
0.0311
0.0266
0.050
0.018


2789391



















rpart:2478155
0.64
0.0258
0.1717
0.0242
0.64
0.0178
0.55
0.73
0.67
0.62
0.50
0.0278
0.61
0.0311
0.0266
0.050
0.018


2789391



















rpart:2789391
0.64
0.0258
0.1717
0.0242
0.64
0.0178
0.55
0.73
0.67
0.62
0.50
0.0278
0.61
0.0311
0.0266
0.050
0.018


2364325



















rpart:2789391
0.64
0.0258
0.1717
0.0242
0.64
0.0178
0.55
0.73
0.67
0.62
0.50
0.0278
0.61
0.0311
0.0266
0.050
0.018


2512364



















rpart:2789391
0.64
0.0258
0.1717
0.0242
0.64
0.0178
0.55
0.73
0.67
0.62
0.50
0.0278
0.61
0.0311
0.0266
0.050
0.018


2956442



















rpart:2789391
0.64
0.0258
0.1717
0.0242
0.64
0.0178
0.55
0.73
0.67
0.62
0.50
0.0278
0.61
0.0311
0.0266
0.050
0.018


3005357



















rpart:2789391
0.64
0.0258
0.1717
0.0242
0.64
0.0178
0.55
0.73
0.67
0.62
0.50
0.0278
0.61
0.0311
0.0266
0.050
0.018


3066770



















rf:2458376
0.66
0.0261
0.0119
0.0128
0.68
0.0021
0.55
0.82
0.75
0.64
0.55
0.0058
0.64
0.0292
0.0167
0.412
0.019


2512364



















rf:3463598
0.66
0.0264
0.0053
0.0011
0.68
0.0021
0.61
0.76
0.71
0.66
0.31
0.0013
0.71
0.0015
0.0028
0.100
0.019


2651515



















nb:3463598
0.66
0.0267
0.0113
0.0049
0.67
0.0046
0.45
0.88
0.79
0.62
0.49
0.0010
0.69
0.0041
0.0094
0.156
0.024


2651515



















svm:2478155
0.66
0.0267
0.0965
0.0258
0.61
0.0544
0.55
0.67
0.62
0.59
0.06
0.1274
0.68
0.0345
0.0291
0.045
0.010


2956441



















svm:2789391
0.66
0.0267
0.0247
0.1214
0.65
0.0093
0.55
0.76
0.69
0.63
−0.28
0.0123
0.64
0.1315
0.1387
0.441
0.099


3005357



















rf:2461837
0.66
0.0274
0.0119
0.0104
0.65
0.0093
0.55
0.76
0.69
0.63
0.57
0.0149
0.64
0.0147
0.0130
0.104
0.023


3066770



















svm:3326487
0.66
0.0276
0.0247
0.0294
0.55
0.2693
0.36
0.73
0.57
0.53
−0.18
0.5564
0.68
0.0207
0.0353
0.147
0.214


341475



















rf:3414753
0.66
0.0278
0.0255
0.0159
0.61
0.0544
0.45
0.76
0.65
0.58
0.57
0.1146
0.72
0.0250
0.0192
0.290
0.038


2512364



















rf:3414753
0.66
0.0283
0.0255
0.0185
0.65
0.0093
0.73
0.58
0.63
0.68
0.52
0.0200
0.68
0.0303
0.0221
0.030
0.007


3139092



















svm:2956442
0.66
0.0286
0.0113
0.0467
0.68
0.0021
0.76
0.61
0.66
0.71
−0.28
0.0043
0.70
0.0538
0.0548
0.194
0.014


3005357



















knn:3463598
0.66
0.0286
0.0511
0.0243
0.62
0.0320
0.45
0.79
0.68
0.59
0.54
0.0390
0.67
0.0255
0.0276
0.073
0.047


2461837



















rf:2478155
0.66
0.0288
0.1717
0.0186
0.61
0.0544
0.36
0.85
0.71
0.57
0.58
0.0258
0.65
0.0135
0.0241
0.303
0.140


2651515



















svm:2364325
0.66
0.0295
0.0965
0.0157
0.64
0.0178
0.36
0.91
0.80
0.59
0.25
0.0100
0.69
0.0169
0.0210
0.120
0.016


2651515



















svm:2461837
0.66
0.0295
0.0019
0.0309
0.70
0.0009
0.64
0.76
0.72
0.68
0.07
0.0007
0.64
0.0336
0.0353
0.038
0.034


2364325



















nb:3326487
0.65
0.0305
0.0965
0.0233
0.58
0.1339
0.33
0.82
0.65
0.55
0.47
0.1435
0.66
0.0106
0.0315
0.083
0.077


2789391



















knn:2512364
0.65
0.0312
0.0119
0.0098
0.67
0.0046
0.55
0.79
0.72
0.63
0.54
0.0068
0.67
0.0152
0.0125
0.048
0.009


2956442



















knn:2789391
0.65
0.0314
0.0511
0.0192
0.67
0.0046
0.52
0.82
0.74
0.63
0.54
0.0028
0.67
0.0230
0.0232
0.087
0.013


3463598



















nb:2789391
0.65
0.0326
0.0048
0.0143
0.70
0.0009
0.70
0.70
0.70
0.70
0.43
0.0023
0.66
0.0127
0.0179
0.032
0.017


2461837



















svm:2461837
0.65
0.0326
0.0505
0.0573
0.61
0.0544
0.48
0.73
0.64
0.59
0.05
0.0837
0.66
0.0578
0.0659
0.187
0.062


3066770



















knn:2332285
0.65
0.0327
0.0053
0.0026
0.68
0.0021
0.52
0.85
0.77
0.64
0.52
0.0026
0.72
0.0035
0.0046
0.065
0.016


2651515



















knn:2461837
0.65
0.0328
0.0255
0.0321
0.59
0.0876
0.48
0.70
0.62
0.58
0.53
0.1057
0.66
0.0366
0.0352
0.063
0.020


2956442



















rpart:2364325
0.65
0.0335
0.0255
0.0254
0.59
0.0876
0.48
0.70
0.62
0.58
0.56
0.0866
0.66
0.0221
0.0282
0.004
0.004


3005357



















nb:3066770
0.65
0.0337
0.0505
0.0257
0.62
0.0320
0.55
0.70
0.64
0.61
0.47
0.0365
0.68
0.0247
0.0298
0.076
0.033


2956442



















svm:2458376
0.65
0.0337
0.0113
0.0092
0.67
0.0046
0.85
0.48
0.62
0.76
0.14
0.0095
0.65
0.0251
0.0137
0.026
0.003


3139092



















svm:3066770
0.65
0.0337
0.0247
0.0078
0.64
0.0178
0.39
0.88
0.76
0.59
−0.10
0.0043
0.64
0.0083
0.0129
0.383
0.039


2651515



















svm:3414753
0.65
0.0348
0.0505
0.0204
0.61
0.0544
0.52
0.70
0.63
0.59
0.03
0.1041
0.68
0.0333
0.0234
0.113
0.020


2364325



















rf:2458376
0.65
0.0360
0.0966
0.0439
0.59
0.0876
0.82
0.36
0.56
0.67
0.41
0.1245
0.62
0.0788
0.0484
0.117
0.019


2461837



















svm:3463598
0.65
0.0372
0.0965
0.0380
0.62
0.0320
0.45
0.79
0.68
0.59
0.16
0.0386
0.68
0.0364
0.0441
0.324
0.023


2651515



















rf:3414753
0.65
0.0383
0.0966
0.0215
0.64
0.0178
0.55
0.73
0.67
0.62
0.55
0.0310
0.68
0.0286
0.0246
0.150
0.040


3066770



















knn:2458376
0.64
0.0388
0.6465
0.0344
0.59
0.0876
0.61
0.58
0.59
0.59
0.50
0.2430
0.59
0.0574
0.0381
0.160
0.056


2478155



















rpart:3066770
0.62
0.0389
0.2868
0.0371
0.62
0.0320
0.45
0.79
0.68
0.59
0.50
0.0296
0.65
0.0334
0.0403
0.042
0.023


2956442



















knn:2332285
0.65
0.0395
0.0119
0.0114
0.70
0.0009
0.64
0.76
0.72
0.68
0.50
0.0021
0.69
0.0133
0.0142
0.071
0.021


2461837



















nb:3326487
0.65
0.0396
0.0505
0.0202
0.65
0.0093
0.61
0.70
0.67
0.64
0.39
0.0251
0.66
0.0110
0.0263
0.090
0.101


2461837



















svm:2458376
0.65
0.0396
0.0965
0.0247
0.61
0.0544
0.42
0.79
0.67
0.58
0.15
0.1476
0.68
0.0605
0.0287
0.141
0.017


2956442



















svm:2461837
0.65
0.0409
0.0505
0.0500
0.65
0.0093
0.55
0.76
0.69
0.63
−0.07
0.0217
0.61
0.0816
0.0539
0.261
0.079


2512364



















svm:3326487
0.65
0.0409
0.0505
0.0354
0.55
0.2693
0.36
0.73
0.57
0.53
−0.32
0.5564
0.66
0.0176
0.0431
0.163
0.291


3463598



















svm:3066770
0.65
0.0422
0.0965
0.0312
0.61
0.0544
0.55
0.67
0.62
0.59
−0.18
0.0700
0.67
0.0292
0.0355
0.068
0.029


2956442



















rpart:2512364
0.64
0.0435
0.4478
0.0595
0.58
0.1339
0.52
0.64
0.59
0.57
0.53
0.2051
0.65
0.0581
0.0616
0.046
0.017


3005357



















rf:2461837
0.64
0.0441
0.0511
0.0243
0.65
0.0093
0.64
0.67
0.66
0.65
0.43
0.0270
0.64
0.0412
0.0272
0.103
0.025


2956442



















nb:3463598
0.64
0.0449
0.0505
0.0297
0.67
0.0046
0.58
0.76
0.70
0.64
0.50
0.0093
0.69
0.0354
0.0337
0.086
0.026


2956442



















rf:3326487
0.64
0.0454
0.0255
0.0086
0.67
0.0046
0.61
0.73
0.69
0.65
0.32
0.0113
0.69
0.0078
0.0127
0.147
0.066


3463598



















rf:3139092
0.64
0.0454
0.0511
0.0445
0.62
0.0320
0.76
0.48
0.60
0.67
0.46
0.0497
0.66
0.0595
0.0482
0.033
0.006


2364325



















rpart:2458376
0.62
0.0463
0.2868
0.0446
0.62
0.0320
0.52
0.73
0.65
0.60
0.52
0.0514
0.66
0.0545
0.0467
0.203
0.046


3414753



















rpart:3414753
0.62
0.0463
0.2868
0.0446
0.62
0.0320
0.52
0.73
0.65
0.60
0.52
0.0514
0.66
0.0545
0.0467
0.203
0.046


2332285



















rpart:3414753
0.62
0.0463
0.2868
0.0446
0.62
0.0320
0.52
0.73
0.65
0.60
0.52
0.0514
0.66
0.0545
0.0467
0.203
0.046


2364325



















rpart:3414753
0.62
0.0463
0.2868
0.0446
0.62
0.0320
0.52
0.73
0.65
0.60
0.52
0.0514
0.66
0.0545
0.0467
0.203
0.046


2478155



















rpart:3414753
0.62
0.0463
0.2868
0.0446
0.62
0.0320
0.52
0.73
0.65
0.60
0.52
0.0514
0.66
0.0545
0.0467
0.203
0.046


2512364



















rpart:3414753
0.62
0.0463
0.2868
0.0446
0.62
0.0320
0.52
0.73
0.65
0.60
0.52
0.0514
0.66
0.0545
0.0467
0.203
0.046


2789391



















rpart:3414753
0.62
0.0463
0.2868
0.0446
0.62
0.0320
0.52
0.73
0.65
0.60
0.52
0.0514
0.66
0.0545
0.0467
0.203
0.046


2956442



















rpart:3414753
0.62
0.0463
0.2868
0.0446
0.62
0.0320
0.52
0.73
0.65
0.60
0.52
0.0514
0.66
0.0545
0.0467
0.203
0.046


3005357



















rpart:3414753
0.62
0.0463
0.286g
0.0446
0.62
0.0320
0.52
0.73
0.65
0.60
0.52
0.0514
0.66
0.0545
0.0467
0.203
0.046


3066770



















rpart:3414753
0.62
0.0463
0.2868
0.0446
0.62
0.0320
0.52
0.73
0.65
0.60
0.52
0.0514
0.66
0.0545
0.0467
0.203
0.046


3139092



















rf:2461837
0.64
0.0475
0.0966
0.0350
0.64
0.0178
0.61
0.67
0.65
0.63
0.49
0.0522
0.63
0.0517
0.0383
0.255
0.043


2512364



















svm:2461837
0.64
0.0478
0.1729
0.0447
0.55
0.2693
0.91
0.18
0.53
0.67
−14.31
0.3448
0.59
0.1062
0.0572
0.255
0.065


2956442



















rpart:2478155
0.64
0.0485
0.0966
0.1060
0.61
0.0544
0.58
0.64
0.61
0.60
0.56
0.1025
0.55
0.1274
0.1054
0.902
0.497


2512364



















rpart:3326487
0.58
0.0487
0.8432
0.0464
0.58
0.1339
0.18
0.97
0.86
0.54
0.57
0.0072
0.59
0.0101
0.0775
0.318
0.319


2332285



















rpart:3326487
0.58
0.0487
0.8432
0.0464
0.58
0.1339
0.18
0.97
0.86
0.54
0.57
0.0072
0.59
0.0101
0.0775
0.318
0.319


2364325



















rpart:3326487
0.58
0.0487
0.8432
0.0464
0.58
0.1339
0.18
0.97
0.86
0.54
0.57
0.0072
0.59
0.0101
0.0775
0.318
0.319


2478155



















rpart:3326487
0.58
0.0487
0.8432
0.0464
0.58
0.1339
0.18
0.97
0.86
0.54
0.57
0.0072
0.59
0.0101
0.0775
0.318
0.319


2512364



















rpart:3326487
0.58
0.0487
0.8432
0.0464
0.58
0.1339
0.18
0.97
0.86
0.54
0.57
0.0072
0.59
0.0101
0.0775
0.318
0.319


2789391



















rpart:3326487
0.58
0.0487
0.8432
0.0464
0.58
0.1339
0.18
0.97
0.86
0.54
0.57
0.0072
0.59
0.0101
0.0775
0.318
0.319


2956442



















rpart:3326487
0.58
0.0487
0.8432
0.0464
0.58
0.1339
0.18
0.97
0.86
0.54
0.57
0.0072
0.59
0.0101
0.0775
0.318
0.319


3005357



















rpart:3326487
0.58
0.0487
0.8432
0.0464
0.58
0.1339
0.18
0.97
0.86
0.54
0.57
0.0072
0.59
0.0101
0.0775
0.318
0.319


3066770



















rpart:3326487
0.58
0.0487
0.8432
0.0464
0.58
0.1339
0.18
0.97
0.86
0.54
0.57
0.0072
0.59
0.0101
0.0775
0.318
0.319


3414753



















rpart:3326487
0.58
0.0487
0.8432
0.0464
0.58
0.1339
0.18
0.97
0.86
0.54
0.57
0.0072
0.59
0.0101
0.0775
0.318
0.319


3463598



















svm:2478155
0.64
0.0493
0.0247
0.0176
0.59
0.0876
0.64
0.55
0.58
0.60
0.32
0.1798
0.66
0.0330
0.0232
0.020
0.004


3139092



















rf:3463598
0.64
0.0497
0.0119
0.0102
0.65
0.0093
0.45
0.85
0.75
0.61
0.60
0.0141
0.68
0.0159
0.0137
0.332
0.035


3066770



















knn:2332285
0.64
0.0498
0.0053
0.0076
0.70
0.0009
0.61
0.79
0.74
0.67
0.51
0.0011
0.68
0.0117
0.0100
0.093
0.012


2478155



















nb:2458376
0.80
0.0000
0.0001
0.0001
0.67
0.0046
0.45
0.88
0.79
0.62
0.50
0.0025
0.78
0.0003
0.0008
0.030
0.005


2478155



















knn:2478155
0.79
0.0000
0.0009
0.0000
0.70
0.0009
0.61
0.79
0.74
0.67
0.53
0.0008
0.77
0.0001
0.0002
0.001
0.001


2364325



















svm:2332285
0.79
0.0000
0.0001
0.0002
0.71
0.0004
0.64
0.79
0.75
0.68
−0.14
0.0007
0.77
0.0006
0.0009
0.009
0.003


3005357



















svm:2458376
0.78
0.0001
0.0007
0.0001
0.73
0.0001
0.67
0.79
0.76
0.70
−0.24
0.0003
0.77
0.0004
0.0005
0.033
0.007


2332285



















svm:2478155
0.78
0.0001
0.0000
0.0000
0.71
0.0004
0.70
0.73
0.72
0.71
0.19
0.0008
0.75
0.0003
0.0002
0.006
0.002


2364325



















nb:2332285
0.78
0.0001
0.0001
0.0006
0.67
0.0046
0.55
0.79
0.72
0.63
0.50
0.0058
0.75
0.0009
0.0019
0.018
0.005


2478155



















svm:2332285
0.78
0.0001
0.0007
0.0002
0.71
0.0004
0.64
0.79
0.75
0.68
−0.12
0.0007
0.77
0.0005
0.0008
0.010
0.004


2512364



















svm:2458376
0.78
0.0001
0.0002
0.0001
0.71
0.0004
0.61
0.82
0.77
0.68
−0.10
0.0005
0.78
0.0005
0.0006
0.027
0.004


2364325



















nb:3414753
0.78
0.0001
0.0002
0.0002
0.68
0.0021
0.61
0.76
0.71
0.66
0.49
0.0029
0.76
0.0002
0.0009
0.008
0.002


2478155



















nb:2458376
0.77
0.0001
0.0002
0.0002
0.70
0.0009
0.61
0.79
0.74
0.67
0.45
0.0017
0.77
0.0005
0.0010
0.031
0.008


2364325



















nb:2478155
0.77
0.0001
0.0007
0.0001
0.71
0.0004
0.73
0.70
0.71
0.72
0.44
0.0006
0.77
0.0001
0.0006
0.000
0.001


3005351



















nb:2458376
0.77
0.0001
0.0007
0.0002
0.67
0.0046
0.52
0.82
0.74
0.63
0.50
0.0098
0.74
0.0007
0.0010
0.059
0.012


2332285









Performance of pairwise combinations of the 15 markers across different metrics for the Recurrence endpoint. All classifiers have an Wilcox P-value <=0.05.



















TABLE 12














UVA
UVA




WILCOX
KS
T-TEST



KM
HR
OR




P-
P-
P-



P-
P-
P-


CLASSIFIER
AUC
VALUE
VALUE
VALUE
PPV
NPV
CUTOFF
VALUE
VALUE
VALUE

























rpart: 3326487 2458376
0.70
0.0172
0.2259
0.0114
0.50
0.82
0.41
0.0264
0.0061
0.0200


nb: 3326487 3414753
0.70
0.0373
0.0330
0.0630
0.42
0.66
0.41
0.5225
0.0124
0.0872


nb: 3326487 2332285
0.70
0.0373
0.0451
0.0412
0.54
0.71
0.37
0.0771
0.0088
0.0617


nb: 3326487 2478155
0.73
0.0166
0.0192
0.0146
0.53
0.73
0.40
0.0456
0.0015
0.0343


knn: 3326487 2478155
0.68
0.0287
0.1722
0.0256
0.56
0.78
0.50
0.0130
0.0197
0.0300


knn: 3326487 3139092
0.69
0.0452
0.0453
0.0354
0.67
0.76
0.48
0.0051
0.0180
0.0448


rpart: 3326487 3139092
0.67
0.0483
0.4356
0.0282
0.50
0.76
0.41
0.0643
0.0099
0.0380


rf: 3326487 2789391
0.69
0.0466
0.0637
0.0266
0.56
0.76
0.33
0.0236
0.0071
0.0389


knn: 3326487 2789391
0.71
0.0251
0.1494
0.0526
0.60
0.67
0.54
0.1140
0.0144
0.0736


svm: 3326487 2789391
0.70
0.0373
0.0861
0.0460
0.50
0.72
−0.44
0.1119
0.0173
0.0582


rpart: 3326487 2461837
0.68
0.0287
0.1722
0.0256
0.56
0.78
0.47
0.0308
0.0405
0.0300


nb: 3326487 2512364
0.70
0.0324
0.0546
0.0306
0.52
0.80
0.38
0.0339
0.0106
0.0444


knn: 3326487 2512364
0.71
0.0233
0.0991
0.0391
0.45
0.67
0.50
0.4034
0.0216
0.0509


nb: 3326487 2364325
0.69
0.0428
0.1781
0.0361
0.50
0.74
0.37
0.0894
0.0060
0.0595


nb: 3326487 3066770
0.69
0.0458
0.0273
0.0729
0.56
0.69
0.41
0.1145
0.0184
0.0979


rpart: 3326487 2651515
0.63
0.0399
0.5592
0.0362
0.71
0.71
0.56
0.0007
0.0025
0.0508


rf: 2458376 3414753
0.75
0.0090
0.0721
0.0058
0.67
0.76
0.58
0.0038
0.0048
0.0114


nb: 2458376 3414753
0.76
0.0055
0.0139
0.0027
0.75
0.73
0.48
0.0084
0.0006
0.0129


svm: 2458376 3414753
0.72
0.0225
0.0652
0.0229
0.44
0.68
0.08
0.3676
0.0152
0.0305


rf: 2458376 2332285
0.78
0.0023
0.0139
0.0025
0.46
0.85
0.30
0.0487
0.0025
0.0081


nb: 2458376 2332285
0.77
0.0035
0.0497
0.0024
0.67
0.76
0.44
0.0039
0.0005
0.0111


knn: 2458376 2332285
0.72
0.0212
0.0721
0.0170
0.56
0.76
0.50
0.0331
0.0097
0.0246


rpart: 2458376 2332285
0.69
0.0216
0.1340
0.0187
0.52
0.83
0.48
0.0167
0.0273
0.0252


svm: 2458376 2332285
0.79
0.0019
0.0243
0.0009
0.64
0.78
−0.40
0.0074
0.0003
0.0058


rf: 2458376 2478155
0.79
0.0024
0.0538
0.0010
0.50
0.87
0.49
0.0222
0.0030
0.0055


nb: 2458376 2478155
0.86
0.0001
0.0002
0.0003
0.71
0.71
0.50
0.0101
0.0001
0.0068


knn: 2458376 2478155
0.76
0.0050
0.0380
0.0024
0.80
0.77
0.83
0.0004
0.0051
0.0063


rpart: 2458376 2478155
0.69
0.0216
0.1340
0.0187
0.52
0.83
0.48
0.0167
0.0273
0.0252


svm: 2458376 2478155
0.80
0.0012
0.0069
0.0011
0.63
0.80
0.30
0.0042
0.0016
0.0043


nb: 2458376 3139092
0.73
0.0166
0.0273
0.0038
0.86
0.74
0.49
0.0021
0.0012
0.0160


rpart: 2458376 3139092
0.69
0.0216
0.1340
0.0187
0.52
0.83
0.48
0.0167
0.0273
0.0252


rf: 2458376 2789391
0.76
0.0063
0.0062
0.0004
0.77
0.82
0.54
0.0001
0.0006
0.0028


nb: 2458376 2789391
0.71
0.0243
0.0032
0.0029
0.70
0.74
0.49
0.0026
0.0006
0.0112


rpart: 2458376 2789391
0.69
0.0216
0.1340
0.0187
0.52
0.83
0.48
0.0167
0.0273
0.0252


rf: 2458376 3463598
0.73
0.0160
0.0317
0.0017
1.00
0.76
0.64
0.0000
0.0011
0.0072


knn: 2458376 3463598
0.76
0.0062
0.0380
0.0004
0.86
0.74
0.53
0.0006
0.0004
0.0058


rpart: 2458376 3463598
0.71
0.0043
0.0721
0.0028
0.73
0.77
0.53
0.0012
0.0032
0.0069


rf: 2458376 2461837
0.70
0.0397
0.1112
0.0359
0.45
0.83
0.42
0.0728
0.0493
0.0454


nb: 2458376 2461837
0.69
0.0489
0.0110
0.0101
0.45
0.74
0.37
0.2061
0.0049
0.0206


knn: 2458376 2461837
0.69
0.0475
0.3486
0.0609
0.45
0.74
0.45
0.2061
0.0650
0.0662


rpart: 2458376 2461837
0.68
0.0287
0.1722
0.0256
0.56
0.78
0.47
0.0308
0.0405
0.0300


nb: 2458376 2512364
0.78
0.0021
0.0032
0.0014
0.75
0.73
0.52
0.0040
0.0008
0.0077


knn: 2458376 2512364
0.74
0.0109
0.1154
0.0035
0.48
0.81
0.46
0.0656
0.0044
0.0100


svm: 2458376 2512364
0.77
0.0031
0.0024
0.0008
0.69
0.79
0.19
0.0011
0.0007
0.0041


rf: 2458376 2364325
0.80
0.0015
0.0076
0.0010
0.69
0.79
0.53
0.0008
0.0013
0.0038


nb: 2458376 2364325
0.78
0.0026
0.0101
0.0020
0.62
0.75
0.45
0.0148
0.0006
0.0087


knn: 2458376 2364325
0.74
0.0130
0.0991
0.0079
0.57
0.74
0.50
0.0377
0.0062
0.0140


rpart: 2458376 2364325
0.69
0.0216
0.1340
0.0187
0.52
0.83
0.48
0.0167
0.0273
0.0252


svm: 2458376 2364325
0.79
0.0017
0.0055
0.0016
0.62
0.75
−0.21
0.0148
0.0012
0.0066


rf: 2458376 3066770
0.73
0.0130
0.0451
0.0131
0.60
0.77
0.53
0.0097
0.0129
0.0210


nb: 2458376 3066770
0.76
0.0046
0.0299
0.0020
0.70
0.74
0.45
0.0066
0.0003
0.0096


knn: 2458376 3066770
0.73
0.0153
0.1494
0.0059
0.60
0.77
0.50
0.0082
0.0065
0.0128


rpart: 2458376 3066770
0.69
0.0216
0.1340
0.0187
0.52
0.83
0.48
0.0167
0.0273
0.0252


svm: 2458376 3066770
0.76
0.0046
0.0299
0.0029
0.64
0.78
0.13
0.0070
0.0056
0.0076


rf: 2458376 2956442
0.70
0.0336
0.0637
0.0179
0.59
0.79
0.51
0.0096
0.0176
0.0245


knn: 2458376 2956442
0.70
0.0326
0.1910
0.0173
0.54
0.71
0.52
0.0974
0.0127
0.0258


rpart: 2458376 2956442
0.76
0.0051
0.0473
0.0131
0.60
0.77
0.50
0.0103
0.0124
0.0185


rf: 2458376 3005357
0.74
0.0127
0.0453
0.0099
0.53
0.77
0.50
0.0300
0.0104
0.0158


nb: 2458376 3005357
0.74
0.0093
0.0714
0.0039
0.75
0.73
0.50
0.0040
0.0015
0.0130


knn: 2458376 3005357
0.74
0.0117
0.0751
0.0073
0.56
0.78
0.47
0.0192
0.0098
0.0125


rpart: 2458376 3005357
0.69
0.0216
0.1340
0.0187
0.52
0.83
0.48
0.0167
0.0273
0.0252


svm: 2458376 3005357
0.75
0.0072
0.0101
0.0053
0.67
0.72
0.11
0.0202
0.0063
0.0123


nb: 2458376 2651515
0.70
0.0348
0.0497
0.0080
0.67
0.76
0.42
0.0030
0.0007
0.0211


knn: 2458376 2651515
0.75
0.0073
0.0076
0.0036
0.41
0.75
0.37
0.2759
0.0013
0.0101


rpart: 2458376 2651515
0.71
0.0161
0.1976
0.0117
0.52
0.80
0.39
0.0291
0.0032
0.0185


svm: 2458376 2651515
0.70
0.0348
0.0714
0.0137
0.59
0.79
−0.29
0.0101
0.0077
0.0207


nb: 3414753 2332285
0.79
0.0017
0.0036
0.0038
0.67
0.76
0.45
0.0039
0.0010
0.0125


svm: 3414753 2332285
0.76
0.0060
0.0299
0.0076
0.69
0.79
−0.01
0.0007
0.0060
0.0128


rf: 3414753 2478155
0.81
0.0013
0.0028
0.0015
0.56
1.00
0.28
0.0008
0.0027
0.0049


nb: 3414753 2478155
0.83
0.0003
0.0005
0.0003
0.59
0.79
0.46
0.0069
0.0001
0.0031


knn: 3414753 2478155
0.72
0.0213
0.1494
0.0200
0.50
0.76
0.45
0.0581
0.0107
0.0276


svm: 3414753 2478155
0.81
0.0006
0.0014
0.0005
0.58
0.82
−0.34
0.0062
0.0002
0.0035


nb: 3414753 3139092
0.73
0.0130
0.0652
0.0055
0.56
0.78
0.43
0.0163
0.0017
0.0133


svm: 3414753 3139092
0.72
0.0194
0.0177
0.0276
0.50
0.76
−0.22
0.0666
0.0211
0.0332


rf: 3414753 2789391
0.71
0.0255
0.0277
0.0161
0.63
0.80
0.50
0.0020
0.0143
0.0217


nb: 3414753 2789391
0.73
0.0166
0.0177
0.0042
0.61
0.83
0.43
0.0039
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0.0114


knn: 3414753 2789391
0.77
0.0034
0.0277
0.0010
0.67
0.81
0.46
0.0007
0.0006
0.0040


svm: 3414753 2789391
0.72
0.0194
0.0177
0.0063
0.55
0.81
−0.31
0.0177
0.0013
0.0143


nb: 3414753 3463598
0.69
0.0428
0.0405
0.0086
0.64
0.78
0.46
0.0035
0.0022
0.0189


knn: 3414753 3463598
0.71
0.0281
0.0453
0.0055
0.67
0.76
0.50
0.0064
0.0067
0.0118


rpart: 3414753 3463598
0.71
0.0043
0.0721
0.0028
0.73
0.77
0.53
0.0012
0.0032
0.0069


svm: 3414753 3463598
0.73
0.0130
0.0139
0.0051
0.63
0.80
−0.14
0.0026
0.0047
0.0096


nb: 3414753 2461837
0.71
0.0302
0.0221
0.0127
0.59
0.79
0.45
0.0141
0.0085
0.0199


rpart: 3414753 2461837
0.72
0.0119
0.0721
0.0041
0.73
0.77
0.57
0.0039
0.0107
0.0083


nb: 3414753 2512364
0.77
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0.0043
0.0013
0.57
0.85
0.44
0.0045
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knn: 3414753 2512364
0.77
0.0045
0.0332
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0.64
0.78
0.51
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svm: 3414753 2512364
0.78
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0.0043
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0.60
0.86
−0.19
0.0018
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rf: 3414753 2364325
0.71
0.0264
0.0164
0.0142
0.63
0.80
0.49
0.0026
0.0123
0.0199


nb: 3414753 2364325
0.78
0.0028
0.0127
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0.58
0.82
0.45
0.0042
0.0010
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knn: 3414753 2364325
0.71
0.0258
0.0847
0.0125
0.60
0.77
0.48
0.0056
0.0063
0.0190


nb: 3414753 3066770
0.74
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0.0101
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0.64
0.73
0.47
0.0135
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knn: 3414753 3066770
0.74
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0.1910
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0.70
0.74
0.54
0.0030
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knn: 3414753 2956442
0.70
0.0310
0.0637
0.0313
0.54
0.71
0.50
0.0667
0.0161
0.0380


svm: 3414753 2956442
0.70
0.0373
0.0451
0.0223
0.53
0.75
−0.30
0.0546
0.0096
0.0304


nb: 3414753 3005357
0.75
0.0086
0.0055
0.0045
0.61
0.83
0.43
0.0026
0.0022
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knn: 3414753 3005357
0.78
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0.0115
0.0072
0.53
0.73
0.51
0.0503
0.0054
0.0127


nb: 3414753 2651515
0.72
0.0179
0.0299
0.0038
0.56
0.76
0.41
0.0220
0.0001
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rpart: 3414753 2651515
0.63
0.0399
0.5592
0.0362
0.71
0.71
0.56
0.0007
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0.0508


rf: 2332285 2478155
0.81
0.0011
0.0199
0.0004
0.48
0.86
0.37
0.0343
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nb: 2332285 2478155
0.85
0.0001
0.0001
0.0008
0.67
0.76
0.47
0.0026
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rpart: 2332285 2478155
0.78
0.0017
0.0141
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0.53
0.77
0.55
0.0434
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rf: 2332285 3139092
0.73
0.0172
0.0062
0.0158
0.48
0.81
0.33
0.0656
0.0114
0.0237


nb: 2332285 3139092
0.76
0.0046
0.0017
0.0034
0.67
0.76
0.48
0.0039
0.0011
0.0109


knn: 2332285 3139092
0.70
0.0315
0.0076
0.0062
0.64
0.78
0.48
0.0025
0.0041
0.0111


svm: 2332285 3139092
0.76
0.0050
0.0006
0.0059
0.52
0.80
−0.26
0.0204
0.0049
0.0110


rf: 2332285 2789391
0.76
0.0065
0.0034
0.0027
0.65
0.83
0.44
0.0010
0.0023
0.0068


nb: 2332285 2789391
0.73
0.0153
0.0043
0.0056
0.67
0.76
0.47
0.0039
0.0014
0.0134


knn: 2332285 2789391
0.78
0.0023
0.0052
0.0082
0.60
0.71
0.55
0.0299
0.0039
0.0147


rpart: 2332285 2789391
0.73
0.0046
0.0332
0.0031
0.61
0.83
0.50
0.0031
0.0073
0.0061


svm: 2332285 2789391
0.75
0.0072
0.0451
0.0056
0.67
0.76
−0.01
0.0039
0.0022
0.0115


rf: 2332285 3463598
0.75
0.0077
0.0134
0.0011
0.71
0.81
0.41
0.0003
0.0009
0.0045


nb: 2332285 3463598
0.73
0.0166
0.0139
0.0051
0.75
0.79
0.47
0.0003
0.0015
0.0141


knn: 2332285 3463598
0.75
0.0068
0.0637
0.0094
0.58
0.82
0.50
0.0087
0.0106
0.0196


rpart: 2332285 3463598
0.71
0.0043
0.0721
0.0028
0.73
0.77
0.53
0.0012
0.0032
0.0069


svm: 2332285 3463598
0.71
0.0243
0.0060
0.0014
0.75
0.79
−0.14
0.0003
0.0018
0.0048


rf: 2332285 2461837
0.73
0.0154
0.0380
0.0448
0.42
0.71
0.26
0.4266
0.0550
0.0511


nb: 2332285 2461837
0.71
0.0261
0.0273
0.0104
0.60
0.77
0.46
0.0163
0.0049
0.0181


rpart: 2332285 2461837
0.69
0.0409
0.1494
0.0578
0.45
0.71
0.38
0.3591
0.1003
0.0627


svm: 2332285 2461837
0.77
0.0042
0.0243
0.0058
0.53
0.77
−0.28
0.0447
0.0136
0.0105


nb: 2332285 2512364
0.79
0.0015
0.0028
0.0021
0.67
0.76
0.51
0.0039
0.0011
0.0070


svm: 2332285 2512364
0.80
0.0010
0.0008
0.0009
0.67
0.76
−0.10
0.0039
0.0005
0.0046


rf: 2332285 2364325
0.75
0.0083
0.0538
0.0042
0.64
0.78
0.49
0.0037
0.0031
0.0095


nb: 2332285 2364325
0.77
0.0031
0.0299
0.0036
0.69
0.79
0.47
0.0005
0.0013
0.0105


rpart: 2332285 2364325
0.69
0.0191
0.1154
0.0163
0.55
0.81
0.51
0.0131
0.0210
0.0212


svm: 2332285 2364325
0.79
0.0017
0.0192
0.0023
0.67
0.76
−0.02
0.0039
0.0014
0.0068


nb: 2332285 3066770
0.75
0.0079
0.0101
0.0034
0.62
0.75
0.44
0.0135
0.0008
0.0117


svm: 2332285 3066770
0.79
0.0019
0.0022
0.0020
0.67
0.76
−0.25
0.0039
0.0011
0.0070


svm: 2332285 2956442
0.76
0.0060
0.0157
0.0060
0.67
0.76
−0.17
0.0039
0.0028
0.0129


rf: 2332285 3005357
0.75
0.0090
0.0290
0.0104
0.48
0.78
0.30
0.0663
0.0056
0.0171


nb: 2332285 3005357
0.76
0.0046
0.0028
0.0051
0.64
0.73
0.49
0.0123
0.0017
0.0131


knn: 2332285 3005357
0.68
0.0493
0.1976
0.1346
0.52
0.80
0.39
0.0184
0.0971
0.1374


rpart: 2332285 3005357
0.69
0.0333
0.3906
0.0381
0.53
0.75
0.50
0.0343
0.0206
0.0427


svm: 2332285 3005357
0.81
0.0006
0.0022
0.0018
0.67
0.76
−0.22
0.0039
0.0010
0.0068


rf: 2332285 2651515
0.73
0.0143
0.0397
0.0052
0.73
0.77
0.44
0.0002
0.0008
0.0120


nb: 2332285 2651515
0.76
0.0050
0.0060
0.0028
0.82
0.80
0.44
0.0000
0.0002
0.0105


rpart: 2332285 2651515
0.63
0.0399
0.5592
0.0362
0.71
0.71
0.56
0.0007
0.0025
0.0508


rf: 2478155 3139092
0.78
0.0030
0.0277
0.0033
0.63
0.80
0.66
0.0011
0.0047
0.0076


nb: 2478155 3139092
0.82
0.0005
0.0017
0.0002
0.61
0.83
0.45
0.0013
0.0001
0.0025


knn: 2478155 3139092
0.78
0.0033
0.0991
0.0025
0.55
0.81
0.48
0.0094
0.0052
0.0069


svm: 2478155 3139092
0.71
0.0261
0.0393
0.0193
0.50
0.92
−0.08
0.0100
0.0245
0.0290


rf: 2478155 2789391
0.83
0.0005
0.0015
0.0003
0.55
0.81
0.47
0.0177
0.0008
0.0022


nb: 2478155 2789391
0.79
0.0019
0.0079
0.0009
0.63
0.80
0.47
0.0020
0.0002
0.0045


knn: 2478155 2789391
0.74
0.0100
0.0453
0.0163
0.69
0.79
0.54
0.0004
0.0067
0.0239


rpart: 2478155 2789391
0.73
0.0046
0.0332
0.0031
0.61
0.83
0.50
0.0031
0.0073
0.0061


svm: 2478155 2789391
0.74
0.0120
0.0060
0.0035
0.55
0.81
−0.23
0.0177
0.0006
0.0097


rf: 2478155 3463598
0.83
0.0006
0.0015
0.0005
0.50
1.00
0.27
0.0050
0.0014
0.0037


nb: 2478155 3463598
0.76
0.0046
0.0367
0.0014
0.62
0.75
0.48
0.0072
0.0004
0.0065


knn: 2478155 3463598
0.73
0.0130
0.0397
0.0103
0.52
0.83
0.44
0.0214
0.0138
0.0176


rpart: 2478155 3463598
0.71
0.0043
0.0721
0.0028
0.73
0.77
0.53
0.0012
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0.0069


svm: 2478155 3463598
0.79
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0.0101
0.0010
0.57
0.85
0.13
0.0088
0.0071
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rf: 2478155 2461837
0.75
0.0094
0.0562
0.0033
0.60
0.77
0.64
0.0244
0.0127
0.0088


nb: 2478155 2461837
0.77
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0.0019
0.58
0.82
0.44
0.0080
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0.0060


knn: 2478155 2461837
0.73
0.0159
0.0141
0.0010
0.54
1.00
0.42
0.0017
0.0068
0.0098


rpart: 2478155 2461837
0.68
0.0287
0.1722
0.0256
0.56
0.78
0.47
0.0308
0.0405
0.0300


svm: 2478155 2461837
0.71
0.0281
0.0221
0.0151
0.52
0.83
−0.02
0.0242
0.0338
0.0221


rf: 2478155 2512364
0.70
0.0359
0.0453
0.0374
0.46
0.80
0.43
0.1188
0.0465
0.0459


nb: 2478155 2512364
0.83
0.0002
0.0014
0.0002
0.55
0.81
0.47
0.0094
0.0002
0.0023


knn: 2478155 2512364
0.75
0.0074
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0.58
0.82
0.50
0.0038
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0.0080


rf: 2478155 2364325
0.86
0.0002
0.0003
0.0001
0.58
1.00
0.43
0.0004
0.0004
0.0018


nb: 2478155 2364325
0.82
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0.0017
0.0002
0.58
0.82
0.46
0.0042
0.0001
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knn: 2478155 2364325
0.83
0.0005
0.0052
0.0001
0.67
0.81
0.53
0.0003
0.0002
0.0012


rpart: 2478155 2364325
0.68
0.0491
0.1199
0.0331
0.44
0.75
0.53
0.2860
0.0645
0.0425


svm: 2478155 2364325
0.84
0.0002
0.0002
0.0002
0.65
0.90
−0.01
0.0001
0.0006
0.0020


rf: 2478155 3066770
0.79
0.0020
0.0080
0.0008
0.54
0.88
0.38
0.0035
0.0024
0.0040


nb: 2478155 3066770
0.83
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0.0043
0.0002
0.65
0.83
0.44
0.0010
0.0000
0.0021


knn: 2478155 3066770
0.79
0.0022
0.0172
0.0010
0.54
1.00
0.45
0.0017
0.0019
0.0059


rpart: 2478155 3066770
0.76
0.0015
0.0141
0.0008
0.56
0.94
0.47
0.0013
0.0127
0.0078


svm: 2478155 3066770
0.75
0.0079
0.0069
0.0097
0.57
0.89
−0.03
0.0039
0.0131
0.0145


rf: 2478155 2956442
0.77
0.0043
0.0172
0.0015
0.55
0.84
0.45
0.0077
0.0022
0.0058


nb: 2478155 2956442
0.72
0.0194
0.0791
0.0097
0.50
0.76
0.43
0.0755
0.0032
0.0168


knn: 2478155 2956442
0.73
0.0139
0.1783
0.0157
0.54
0.71
0.52
0.0697
0.0100
0.0218


rpart: 2478155 2956442
0.76
0.0015
0.0141
0.0008
0.56
0.94
0.47
0.0013
0.0127
0.0078


svm: 2478155 2956442
0.69
0.0428
0.1100
0.0449
0.47
0.73
−0.18
0.1612
0.0257
0.0508


rf: 2478155 3005357
0.77
0.0051
0.0277
0.0018
0.59
0.79
0.66
0.0031
0.0032
0.0057


nb: 2478155 3005357
0.81
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0.0101
0.0006
0.58
0.82
0.44
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0.0036


knn: 2478155 3005357
0.79
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0.0380
0.0025
0.52
0.88
0.41
0.0065
0.0020
0.0081


svm: 2478155 3005357
0.81
0.0009
0.0079
0.0011
0.58
0.82
−0.07
0.0036
0.0013
0.0039


nb: 2478155 2651515
0.80
0.0012
0.0032
0.0005
0.77
0.82
0.45
0.0000
0.0000
0.0048


knn: 2478155 2651515
0.78
0.0035
0.0011
0.0002
0.63
0.80
0.46
0.0008
0.0001
0.0016


rpart: 2478155 2651515
0.63
0.0399
0.5592
0.0362
0.71
0.71
0.56
0.0007
0.0025
0.0508


svm: 2478155 2651515
0.69
0.0400
0.1175
0.0257
0.47
0.69
−0.29
0.2121
0.0045
0.0352


rf: 3139092 2789391
0.71
0.0246
0.0094
0.0141
0.59
0.79
0.53
0.0077
0.0128
0.0205


nb: 3139092 2789391
0.73
0.0166
0.0139
0.0061
0.59
0.79
0.44
0.0077
0.0017
0.0135


knn: 3139092 2789391
0.70
0.0363
0.0277
0.0068
0.63
0.80
0.48
0.0020
0.0045
0.0116


rpart: 3139092 3463598
0.71
0.0043
0.0721
0.0028
0.73
0.77
0.53
0.0012
0.0032
0.0069


nb: 3139092 2461837
0.69
0.0400
0.0221
0.0238
0.61
0.83
0.43
0.0042
0.0200
0.0311


rpart: 3139092 2461837
0.68
0.0287
0.1722
0.0256
0.56
0.78
0.47
0.0308
0.0405
0.0300


svm: 3139092 2461837
0.71
0.0243
0.0595
0.0230
0.53
0.77
0.02
0.0746
0.0377
0.0296


nb: 3139092 2512364
0.75
0.0079
0.0017
0.0034
0.58
0.82
0.47
0.0050
0.0025
0.0085


nb: 3139092 2364325
0.75
0.0072
0.0079
0.0051
0.58
0.82
0.44
0.0042
0.0024
0.0114


knn: 3139092 2364325
0.72
0.0211
0.0637
0.0124
0.59
0.79
0.54
0.0052
0.0126
0.0174


svm: 3139092 2364325
0.75
0.0079
0.0079
0.0070
0.55
0.81
−0.15
0.0103
0.0051
0.0128


nb: 3139092 3066770
0.74
0.0102
0.0101
0.0053
0.64
0.78
0.46
0.0041
0.0019
0.0124


knn: 3139092 3066770
0.72
0.0215
0.0847
0.0105
0.64
0.78
0.51
0.0041
0.0103
0.0104


svm: 3139092 3066770
0.72
0.0209
0.0177
0.0192
0.58
0.82
−0.21
0.0056
0.0161
0.0260


nb: 3139092 2956442
0.70
0.0348
0.0273
0.0432
0.53
0.77
0.43
0.0324
0.0241
0.0506


knn: 3139092 2956442
0.70
0.0348
0.0332
0.0715
0.43
0.77
0.38
0.1932
0.0504
0.0784


svm: 3139092 2956442
0.75
0.0066
0.0017
0.0351
0.50
0.79
−0.04
0.0399
0.0237
0.0435


nb: 3139092 3005357
0.72
0.0225
0.0022
0.0078
0.63
0.80
0.47
0.0022
0.0047
0.0142


knn: 3139092 3005357
0.70
0.0320
0.0751
0.0244
0.52
0.83
0.41
0.0157
0.0155
0.0321


svm: 3139092 3005357
0.72
0.0225
0.0101
0.0151
0.58
0.82
0.12
0.0050
0.0149
0.0220


rf: 2789391 3463598
0.74
0.0104
0.0277
0.0034
0.67
0.81
0.43
0.0008
0.0029
0.0076


nb: 2789391 3463598
0.71
0.0302
0.0194
0.0130
0.50
0.74
0.44
0.0782
0.0032
0.0218


knn: 2789391 3463598
0.74
0.0117
0.0453
0.0062
0.69
0.79
0.54
0.0007
0.0056
0.0124


rpart: 2789391 3463598
0.71
0.0043
0.0721
0.0028
0.73
0.77
0.53
0.0012
0.0032
0.0069


svm: 2789391 3463598
0.71
0.0302
0.0139
0.0130
0.50
0.74
−0.32
0.0782
0.0055
0.0200


rf: 2789391 2461837
0.73
0.0143
0.0637
0.0105
0.56
0.78
0.47
0.0308
0.0166
0.0154


nb: 2789391 2461837
0.69
0.0458
0.0221
0.0202
0.55
0.81
0.40
0.0177
0.0116
0.0273


knn: 2789391 2461837
0.72
0.0192
0.0991
0.0147
0.60
0.77
0.49
0.0106
0.0108
0.0209


rpart: 2789391 2461837
0.68
0.0287
0.1722
0.0256
0.56
0.78
0.47
0.0308
0.0405
0.0300


svm: 2789391 2461837
0.69
0.0400
0.0177
0.0371
0.58
0.82
−0.07
0.0103
0.0377
0.0437


rf: 2789391 2512364
0.74
0.0113
0.0164
0.0030
0.61
0.83
0.48
0.0031
0.0044
0.0067


nb: 2789391 2512364
0.76
0.0050
0.0101
0.0024
0.65
0.83
0.48
0.0013
0.0015
0.0068


rpart: 2789391 2512364
0.73
0.0046
0.0332
0.0031
0.61
0.83
0.50
0.0031
0.0073
0.0061


svm: 2789391 2512364
0.74
0.0093
0.0221
0.0086
0.59
0.79
−0.33
0.0138
0.0104
0.0143


rf: 2789391 2364325
0.77
0.0047
0.0290
0.0038
0.53
0.77
0.45
0.0338
0.0058
0.0081


nb: 2789391 2364325
0.74
0.0102
0.0861
0.0045
0.56
0.78
0.47
0.0187
0.0017
0.0108


knn: 2789391 2364325
0.78
0.0033
0.0847
0.0044
0.64
0.78
0.50
0.0030
0.0035
0.0090


rpart: 2789391 2364325
0.73
0.0046
0.0332
0.0031
0.61
0.83
0.50
0.0031
0.0073
0.0061


svm: 2789391 2364325
0.74
0.0111
0.0595
0.0052
0.53
0.77
−0.26
0.0391
0.0016
0.0123


rf: 2789391 3066770
0.75
0.0089
0.0062
0.0044
0.53
0.77
0.35
0.0338
0.0030
0.0088


nb: 2789391 3066770
0.73
0.0153
0.0079
0.0053
0.56
0.78
0.43
0.0157
0.0010
0.0125


knn: 2789391 3066770
0.78
0.0028
0.0229
0.0007
0.75
0.79
0.47
0.0002
0.0004
0.0039


rpart: 2789391 3066770
0.73
0.0046
0.0332
0.0031
0.61
0.83
0.50
0.0031
0.0073
0.0061


svm: 2789391 3066770
0.73
0.0130
0.0079
0.0048
0.56
0.78
−0.30
0.0157
0.0026
0.0099


rf: 2789391 2956442
0.75
0.0097
0.0473
0.0087
0.58
0.82
0.44
0.0080
0.0087
0.0138


knn: 2789391 2956442
0.74
0.0122
0.1154
0.0109
0.53
0.73
0.50
0.0596
0.0055
0.0172


rpart: 2789391 2956442
0.73
0.0046
0.0332
0.0031
0.61
0.83
0.50
0.0031
0.0073
0.0061


svm: 2789391 2956442
0.70
0.0324
0.0079
0.0151
0.71
0.81
0.08
0.0003
0.0109
0.0218


rf: 2789391 3005357
0.76
0.0074
0.0229
0.0072
0.52
0.80
0.41
0.0200
0.0066
0.0125


nb: 2789391 3005357
0.74
0.0102
0.0330
0.0071
0.53
0.75
0.45
0.0411
0.0027
0.0132


rpart: 2789391 3005357
0.73
0.0046
0.0332
0.0031
0.61
0.83
0.50
0.0031
0.0073
0.0061


svm: 2789391 3005357
0.79
0.0017
0.0001
0.0644
0.68
0.91
−0.28
0.0000
0.0473
0.1003


rf: 2789391 2651515
0.75
0.0097
0.0751
0.0045
0.75
0.73
0.57
0.0005
0.0008
0.0118


nb: 2789391 2651515
0.75
0.0079
0.0101
0.0035
0.63
0.80
0.43
0.0013
0.0001
0.0119


knn: 2789391 2651515
0.76
0.0062
0.0453
0.0032
0.60
0.77
0.45
0.0077
0.0017
0.0076


rpart: 2789391 2651515
0.63
0.0399
0.5592
0.0362
0.71
0.71
0.56
0.0007
0.0025
0.0508


svm: 2789391 2651515
0.74
0.0111
0.0055
0.0072
0.59
0.79
−0.38
0.0044
0.0008
0.0172


rf: 3463598 2461837
0.74
0.0114
0.0277
0.0181
0.55
0.81
0.47
0.0140
0.0275
0.0247


rpart: 3463598 2461837
0.68
0.0287
0.1722
0.0256
0.56
0.78
0.47
0.0308
0.0405
0.0300


rf: 3463598 2512364
0.72
0.0230
0.0637
0.0100
0.75
0.73
0.62
0.0111
0.0124
0.0203


nb: 3463598 2512364
0.75
0.0079
0.0060
0.0056
0.82
0.80
0.53
0.0000
0.0032
0.0122


knn: 3463598 2512364
0.76
0.0061
0.0538
0.0048
0.67
0.69
0.61
0.1293
0.0067
0.0155


rpart: 3463598 2512364
0.71
0.0043
0.0721
0.0028
0.73
0.77
0.53
0.0012
0.0032
0.0069


rf: 3463598 2364325
0.72
0.0179
0.0110
0.0036
0.67
0.76
0.58
0.0056
0.0039
0.0086


nb: 3463598 2364325
0.70
0.0348
0.0299
0.0129
0.60
0.77
0.48
0.0088
0.0059
0.0207


knn: 3463598 2364325
0.73
0.0139
0.0847
0.0052
0.67
0.76
0.53
0.0060
0.0043
0.0103


rpart: 3463598 2364325
0.71
0.0043
0.0721
0.0028
0.73
0.77
0.53
0.0012
0.0032
0.0069


knn: 3463598 3066770
0.75
0.0075
0.0380
0.0014
0.73
0.77
0.48
0.0018
0.0016
0.0063


rpart: 3463598 3066770
0.71
0.0043
0.0721
0.0028
0.73
0.77
0.53
0.0012
0.0032
0.0069


svm: 3463598 3066770
0.69
0.0458
0.0139
0.0077
0.73
0.77
−0.24
0.0018
0.0009
0.0188


rf: 3463598 2956442
0.76
0.0065
0.0164
0.0053
0.55
0.81
0.42
0.0195
0.0109
0.0098


knn: 3463598 2956442
0.70
0.0303
0.1291
0.0129
0.62
0.75
0.51
0.0162
0.0097
0.0195


rpart: 3463598 2956442
0.69
0.0436
0.0991
0.0517
0.48
0.75
0.49
0.1720
0.0707
0.0565


svm: 3463598 2956442
0.69
0.0400
0.1436
0.0239
0.58
0.72
−0.04
0.0495
0.0170
0.0313


rf: 3463598 3005357
0.70
0.0383
0.1722
0.0213
0.48
0.78
0.41
0.0663
0.0185
0.0278


nb: 3463598 3005357
0.72
0.0209
0.0861
0.0148
0.53
0.77
0.44
0.0277
0.0075
0.0228


rpart: 3463598 3005357
0.71
0.0043
0.0721
0.0028
0.73
0.77
0.53
0.0012
0.0032
0.0069


rpart: 3463598 2651515
0.63
0.0399
0.5592
0.0362
0.71
0.71
0.56
0.0007
0.0025
0.0508


nb: 2461837 2512364
0.74
0.0102
0.0221
0.0071
0.61
0.83
0.47
0.0042
0.0082
0.0125


knn: 2461837 2512364
0.73
0.0139
0.0094
0.0155
0.48
0.81
0.48
0.0589
0.0220
0.0224


rf: 2461837 2364325
0.73
0.0178
0.0751
0.0134
0.57
0.74
0.55
0.0511
0.0225
0.0188


nb: 2461837 2364325
0.75
0.0079
0.0127
0.0105
0.56
0.78
0.43
0.0157
0.0082
0.0178


knn: 2461837 2364325
0.74
0.0100
0.0453
0.0078
0.58
0.82
0.50
0.0042
0.0129
0.0138


rpart: 2461837 2364325
0.68
0.0287
0.1722
0.0256
0.56
0.78
0.47
0.0308
0.0405
0.0300


svm: 2461837 2364325
0.73
0.0130
0.0055
0.0264
0.63
0.80
0.07
0.0038
0.0351
0.0341


nb: 2461837 3066770
0.70
0.0373
0.0127
0.0179
0.56
0.76
0.44
0.0264
0.0112
0.0254


svm: 2461837 3066770
0.71
0.0243
0.0367
0.0274
0.54
0.71
0.15
0.1021
0.0236
0.0333


rf: 2461837 2956442
0.70
0.0347
0.0991
0.0439
0.56
0.76
0.47
0.0465
0.0525
0.0494


rpart: 2461837 2956442
0.68
0.0287
0.1722
0.0256
0.56
0.78
0.47
0.0308
0.0405
0.0300


rf: 2461837 3005357
0.69
0.0423
0.0473
0.0446
0.50
0.74
0.46
0.0958
0.0522
0.0495


nb: 2461837 3005357
0.74
0.0102
0.0055
0.0271
0.53
0.73
0.46
0.0651
0.0240
0.0333


knn: 2461837 3005357
0.76
0.0063
0.0094
0.0025
0.60
0.86
0.44
0.0035
0.0068
0.0063


rpart: 2461837 3005357
0.68
0.0287
0.1722
0.0256
0.56
0.78
0.47
0.0308
0.0405
0.0300


svm: 2461837 3005357
0.71
0.0281
0.0127
0.0407
0.61
0.83
0.06
0.0042
0.0476
0.0467


nb: 2461837 2651515
0.72
0.0194
0.0139
0.0117
0.53
0.77
0.41
0.0335
0.0026
0.0219


nb: 2512364 2364325
0.79
0.0019
0.0017
0.0011
0.61
0.83
0.48
0.0015
0.0007
0.0042


knn: 2512364 2364325
0.71
0.0265
0.2825
0.0277
0.60
0.71
0.70
0.0500
0.0377
0.0357


rpart: 2512364 2364325
0.71
0.0117
0.0751
0.0093
0.55
0.84
0.48
0.0100
0.0188
0.0147


svm: 2512364 2364325
0.76
0.0046
0.0017
0.0035
0.58
0.82
−0.30
0.0042
0.0032
0.0082


nb: 2512364 3066770
0.79
0.0017
0.0055
0.0015
0.65
0.83
0.47
0.0006
0.0013
0.0053


knn: 2512364 3066770
0.80
0.0015
0.0241
0.0008
0.64
0.78
0.53
0.0054
0.0015
0.0043


svm: 2512364 3066770
0.77
0.0035
0.0043
0.0041
0.60
0.86
−0.01
0.0016
0.0062
0.0094


nb: 2512364 2956442
0.71
0.0281
0.1100
0.0220
0.53
0.77
0.44
0.0324
0.0138
0.0286


svm: 2512364 2956442
0.69
0.0400
0.1209
0.0289
0.57
0.74
0.05
0.0316
0.0172
0.0356


nb: 2512364 3005357
0.76
0.0046
0.0177
0.0030
0.59
0.79
0.48
0.0049
0.0024
0.0073


knn: 2512364 3005357
0.71
0.0293
0.0380
0.0479
0.42
0.68
0.50
0.4168
0.0312
0.0537


nb: 2512364 2651515
0.77
0.0042
0.0079
0.0018
0.67
0.81
0.45
0.0007
0.0001
0.0092


rpart: 2512364 2651515
0.63
0.0399
0.5592
0.0362
0.71
0.71
0.56
0.0007
0.0025
0.0508


nb: 2364325 3066770
0.78
0.0023
0.0032
0.0019
0.50
0.82
0.40
0.0334
0.0004
0.0079


knn: 2364325 3066770
0.76
0.0064
0.0110
0.0009
0.86
0.74
0.57
0.0001
0.0004
0.0069


rpart: 2364325 3066770
0.69
0.0191
0.1154
0.0163
0.55
0.81
0.51
0.0131
0.0210
0.0212


svm: 2364325 3066770
0.77
0.0031
0.0017
0.0015
0.52
0.83
−0.44
0.0176
0.0011
0.0057


rf: 2364325 2956442
0.72
0.0222
0.0277
0.0214
0.63
0.80
0.48
0.0032
0.0129
0.0279


nb: 2364325 2956442
0.70
0.0324
0.0101
0.0322
0.64
0.78
0.48
0.0031
0.0175
0.0398


knn: 2364325 2956442
0.71
0.0266
0.1154
0.0284
0.57
0.74
0.54
0.0249
0.0235
0.0347


rpart: 2364325 2956442
0.69
0.0191
0.1154
0.0163
0.55
0.81
0.51
0.0131
0.0210
0.0212


svm: 2364325 2956442
0.71
0.0302
0.0101
0.0245
0.62
0.75
−0.09
0.0162
0.0172
0.0308


nb: 2364325 3005357
0.75
0.0079
0.0101
0.0056
0.65
0.83
0.46
0.0007
0.0033
0.0112


knn: 2364325 3005357
0.72
0.0179
0.0277
0.0100
0.61
0.83
0.50
0.0014
0.0076
0.0159


svm: 2364325 3005357
0.74
0.0093
0.0101
0.0068
0.61
0.83
0.03
0.0016
0.0063
0.0124


nb: 2364325 2651515
0.72
0.0225
0.0946
0.0069
0.53
0.75
0.43
0.0550
0.0006
0.0170


knn: 2364325 2651515
0.71
0.0219
0.1783
0.0136
0.83
0.71
0.61
0.0000
0.0023
0.0272


rpart: 2364325 2651515
0.63
0.0399
0.5592
0.0362
0.71
0.71
0.56
0.0007
0.0025
0.0508


knn: 3066770 2956442
0.72
0.0188
0.1663
0.0214
0.50
0.70
0.49
0.1243
0.0129
0.0300


rf: 3066770 3005357
0.72
0.0238
0.0751
0.0161
0.50
0.82
0.33
0.0265
0.0107
0.0227


nb: 3066770 3005357
0.75
0.0072
0.0127
0.0042
0.58
0.72
0.48
0.0264
0.0019
0.0100


knn: 3066770 3005357
0.75
0.0072
0.0164
0.0101
0.58
0.72
0.52
0.0264
0.0069
0.0156


svm: 3066770 3005357
0.75
0.0079
0.0055
0.0069
0.61
0.83
−0.07
0.0026
0.0066
0.0122


nb: 3066770 2651515
0.74
0.0102
0.0079
0.0030
0.50
0.76
0.38
0.0414
0.0001
0.0132


rpart: 3066770 2651515
0.63
0.0399
0.5592
0.0362
0.71
0.71
0.56
0.0007
0.0025
0.0508


svm: 3066770 2651515
0.69
0.0458
0.1436
0.0118
0.53
0.75
−0.63
0.0409
0.0018
0.0225


rf: 2956442 2651515
0.72
0.0185
0.0453
0.0084
0.52
0.80
0.29
0.0163
0.0007
0.0200


nb: 2956442 2651515
0.71
0.0261
0.0055
0.0275
0.50
0.82
0.37
0.0223
0.0040
0.0400


knn: 2956442 2651515
0.77
0.0036
0.0241
0.0136
0.57
0.74
0.47
0.0253
0.0060
0.0216


rpart: 2956442 2651515
0.63
0.0399
0.5592
0.0362
0.71
0.71
0.56
0.0007
0.0025
0.0508


nb: 3005357 2651515
0.73
0.0141
0.0221
0.0049
0.52
0.83
0.38
0.0139
0.0003
0.0134


rpart: 3005357 2651515
0.63
0.0399
0.5592
0.0362
0.71
0.71
0.56
0.0007
0.0025
0.0508


svm: 3005357 2651515
0.69
0.0400
0.1367
0.0381
0.47
0.73
−0.67
0.1165
0.0036
0.0531





Performance of pairwise combinations of the 15 markers across different metrics for the Recurrence endpoint for


LNI negative patients. All classifiers have a Wilcox P-value <= 0.05






Performance of pairwise combinations of the 15 markers across different metrics for the Recurrence endpoint for LNI negative patients. All classifiers have a Wilcox P-value <=0.05



















TABLE 13














UVA
UVA




WILCOX
KS
T-TEST



KM
HR
OR




P-
P-
P-



P-
P-
P-


CLASSIFIER
AUC
VALUE
VALUE
VALUE
PPV
NPV
CUTOFF
VALUE
VALUE
VALUE

























knn: 3326487 2478155
0.81
0.010
0.056
0.005
0.67
0.91
0.50
0.01
0.03
0.02


rf: 3326487 3139092
0.79
0.043
0.128
0.051
0.10
0.40
0.49
0.02
0.05
0.07


rf: 2458376 2512364
0.84
0.014
0.025
0.007
0.43
0.83
0.45
0.31
0.02
0.03


nb: 2458376 2512364
0.78
0.046
0.036
0.021
0.50
0.88
0.41
0.10
0.04
0.05


svm: 2458376 2512364
0.78
0.046
0.025
0.039
0.56
0.82
−0.06
0.08
0.03
0.05


nb: 2458376 2364325
0.79
0.037
0.137
0.047
0.50
0.80
0.42
0.16
0.07
0.06


svm: 2458376 2364325
0.81
0.024
0.073
0.042
0.50
0.80
−0.27
0.16
0.06
0.06


nb: 2458376 3066770
0.79
0.037
0.203
0.033
0.44
0.73
0.39
0.44
0.05
0.05


nb: 3414753 2512364
0.78
0.046
0.137
0.069
0.50
0.80
0.48
0.11
0.08
0.08


rf: 2478155 2461837
0.79
0.043
0.115
0.074
0.43
0.83
0.36
0.30
0.13
0.09


rf: 2478155 2512364
0.93
0.001
0.001
0.003
0.55
0.89
0.45
0.05
0.02
0.04


rpart: 2478155 2512364
0.76
0.049
0.439
0.055
0.75
0.75
0.56
0.04
0.05
0.08


rpart: 3139092 2512364
0.79
0.037
0.050
0.053
0.46
0.86
0.49
0.22
0.09
0.08


rf: 2461837 2512364
0.82
0.019
0.025
0.008
0.56
0.82
0.51
0.15
0.04
0.02


rpart: 2461837 2512364
0.76
0.045
0.115
0.015
0.71
0.85
0.63
0.03
0.06
0.03


svm: 2461837 2512364
0.81
0.024
0.054
0.003
1.00
0.76
0.78
0.03
0.03
0.06


rf: 2512364 2364325
0.78
0.047
0.115
0.044
0.55
0.89
0.44
0.04
0.04
0.06


knn: 2512364 2364325
0.87
0.007
0.026
0.005
0.50
1.00
0.30
0.05
0.01
0.03


svm: 2512364 3066770
0.80
0.030
0.046
0.049
0.57
0.77
0.37
0.08
0.06
0.06


rf: 2512364 2956442
0.79
0.037
0.046
0.031
0.63
0.83
0.56
0.02
0.04
0.06


rf: 2512364 3005357
0.84
0.014
0.025
0.015
0.60
0.90
0.51
0.01
0.02
0.04


knn: 2512364 3005357
0.80
0.034
0.216
0.031
0.50
0.88
0.39
0.07
0.03
0.05


rf: 2512364 2651515
0.85
0.014
0.026
0.014
0.57
0.77
0.65
0.09
0.02
0.03


knn: 2512364 2651515
0.77
0.050
0.050
0.029
0.83
0.86
0.70
0.00
0.01
0.05


svm: 2512364 2651515
0.79
0.037
0.073
0.046
0.71
0.85
0.25
0.00
0.04
0.06


rpart: 3326487 2458376
0.77
0.044
0.238
0.036
0.17
0.38
0.51
0.04
0.05
0.05


3139092












knn: 3326487 2512364
0.78
0.027
0.287
0.017
0.50
1.00
0.17
0.04
0.00
0.07


2651515












rpart: 3326487 2364325
0.21
0.027
0.373
0.081
0.14
0.54
0.40
0.20
0.15
0.11


3066770












nb: 2458376 3414753
0.78
0.046
0.137
0.032
0.55
0.89
0.41
0.05
0.05
0.05


2512364












knn: 2458376 3414753
0.79
0.037
0.262
0.031
0.55
0.89
0.49
0.05
0.05
0.05


2512364












svm: 2458376 3414753
0.79
0.037
0.054
0.030
0.50
0.80
0.25
0.20
0.05
0.05


2512364












hdda: 2458376 3414753
0.78
0.046
0.094
0.035
0.75
0.75
0.53
0.06
0.06
0.06


2364325












nb: 2458376 3414753
0.78
0.046
0.073
0.027
0.71
0.85
0.37
0.01
0.03
0.04


2651515












rf: 2458376 2332285
0.85
0.011
0.012
0.017
0.46
0.86
0.41
0.18
0.03
0.04


2512364












hdda: 2458376 2332285
0.80
0.030
0.036
0.052
0.67
0.79
0.47
0.04
0.05
0.07


2651515












rf: 2458376 2478155
0.78
0.047
0.143
0.033
0.60
0.73
0.59
0.15
0.04
0.06


2789391












svm: 2458376 2478155
0.82
0.019
0.094
0.016
0.56
0.82
−0.04
0.10
0.03
0.04


2789391












rf: 2458376 2478155
0.81
0.029
0.064
0.015
0.58
1.00
0.52
0.01
0.03
0.04


2512364












knn: 2458376 2478155
0.78
0.045
0.115
0.039
0.55
0.89
0.43
0.05
0.07
0.06


3066770












nb: 2458376 2478155
0.78
0.046
0.012
0.058
0.67
0.79
0.39
0.02
0.04
0.08


2651515












knn: 2458376 2478155
0.80
0.030
0.238
0.019
0.63
0.83
0.50
0.05
0.03
0.04


2651515












rf: 2458376 2789391
0.79
0.039
0.115
0.028
0.71
0.85
0.59
0.01
0.04
0.05


2512364












rf: 2458376 3463598
0.80
0.030
0.012
0.025
0.43
0.83
0.39
0.33
0.03
0.08


2512364












svm: 2458376 3463598
0.80
0.030
0.054
0.011
0.63
0.83
−0.26
0.02
0.02
0.04


2512364












rf: 2458376 2461837
0.79
0.039
0.115
0.019
0.71
0.85
0.59
0.02
0.05
0.05


2512364












knn: 2458376 2461837
0.78
0.047
0.128
0.034
0.56
0.82
0.51
0.15
0.07
0.05


2512364












rpart: 2458376 2461837
0.84
0.015
0.128
0.026
0.44
1.00
0.33
0.14
0.07
0.07


2364325












rf: 2458376 2512364
0.84
0.016
0.022
0.010
0.80
0.80
0.68
0.01
0.01
0.03


2364325












nb: 2458376 2512364
0.80
0.030
0.137
0.024
0.63
0.83
0.49
0.03
0.04
0.04


2364325












svm: 2458376 2512364
0.88
0.005
0.017
0.009
0.67
0.79
0.39
0.04
0.02
0.03


2364325












rf: 2458376 2512364
0.89
0.003
0.005
0.009
0.71
0.85
0.56
0.01
0.02
0.04


3066770












nb: 2458376 2512364
0.79
0.037
0.137
0.029
0.50
0.80
0.39
0.13
0.05
0.05


3066770












knn: 2458376 2512364
0.79
0.038
0.262
0.029
0.56
0.82
0.48
0.06
0.04
0.05


3066770












svm: 2458376 2512364
0.82
0.019
0.094
0.011
0.57
0.77
0.28
0.20
0.03
0.03


3066770












rf: 2458376 2512364
0.79
0.037
0.137
0.021
0.67
0.79
0.62
0.01
0.01
0.04


3005357












nb: 2458376 2512364
0.78
0.046
0.169
0.028
0.55
0.89
0.38
0.06
0.05
0.05


3005357












rpart: 2458376 2512364
0.77
0.044
0.439
0.039
0.56
0.82
0.50
0.05
0.05
0.05


3005357












svm: 2458376 2512364
0.78
0.046
0.137
0.029
0.46
0.86
−0.27
0.18
0.04
0.05


3005357












rf: 2458376 2512364
0.82
0.022
0.022
0.019
0.80
0.80
0.66
0.00
0.02
0.04


2651515












knn: 2458376 2512364
0.89
0.003
0.003
0.001
0.67
0.79
0.83
0.01
0.01
0.01


2651515












nb: 2458376 2364325
0.78
0.046
0.137
0.061
0.50
0.80
0.35
0.16
0.03
0.08


2651515












knn: 2458376 2364325
0.81
0.022
0.216
0.038
0.50
0.88
0.50
0.10
0.02
0.08


2651515












nb: 2458376 3066770
0.78
0.046
0.111
0.048
0.57
0.77
0.42
0.14
0.07
0.06


3005357












knn: 2458376 3066770
0.80
0.035
0.216
0.023
0.67
0.79
0.53
0.07
0.04
0.04


3005357












nb: 2458376 3066770
0.80
0.030
0.073
0.021
0.67
0.79
0.37
0.04
0.02
0.04


2651515












svm: 2458376 3066770
0.82
0.019
0.012
0.013
0.67
0.79
1.14
0.07
0.05
0.03


2651515












hdda: 3414753 2478155
0.79
0.037
0.046
0.106
0.44
0.73
0.49
0.39
0.11
0.12


2512364












svm: 3414753 2512364
0.78
0.046
0.073
0.065
0.50
0.80
0.27
0.13
0.05
0.08


2364325












hdda: 3414753 2512364
0.78
0.046
0.111
0.100
0.44
0.73
0.49
0.39
0.11
0.11


3066770












svm: 3414753 2512364
0.79
0.037
0.054
0.040
0.50
0.80
−0.22
0.11
0.04
0.06


3066770












rf: 3414753 2512364
0.79
0.039
0.143
0.065
0.57
0.77
0.66
0.12
0.06
0.08


2956442












knn: 3414753 2512364
0.79
0.038
0.287
0.039
0.57
0.77
0.55
0.14
0.06
0.05


3005357












rpart: 2332285 2478155
0.82
0.019
0.050
0.007
0.71
0.85
0.52
0.01
0.01
0.02


3463598












rf: 2332285 2478155
0.84
0.016
0.022
0.013
0.55
0.89
0.46
0.06
0.03
0.04


2512364












rf: 2332285 2512364
0.79
0.037
0.073
0.040
0.56
0.82
0.48
0.06
0.04
0.06


2364325












rpart: 2332285 2512364
0.79
0.034
0.128
0.064
0.44
1.00
0.53
0.12
0.10
0.15


2364325












rpart: 2332285 2512364
0.81
0.016
0.128
0.011
0.60
0.90
0.58
0.02
0.04
0.03


3066770












rf: 2332285 2512364
0.79
0.039
0.128
0.058
0.56
0.82
0.52
0.06
0.06
0.07


3005357












rf: 2478155 3463598
0.81
0.024
0.054
0.008
0.55
0.89
0.34
0.05
0.01
0.04


2512364












rpart: 2478155 3463598
0.82
0.019
0.050
0.002
0.83
0.86
0.62
0.00
0.01
0.01


2512364












rf: 2478155 2461837
0.86
0.008
0.012
0.012
0.46
0.86
0.36
0.18
0.04
0.04


2512364












rf: 2478155 2512364
0.87
0.006
0.012
0.006
0.67
0.91
0.53
0.01
0.01
0.03


2364325












svm: 2478155 2512364
0.78
0.046
0.111
0.034
0.57
0.77
0.26
0.07
0.02
0.05


2364325












rf: 2478155 2512364
0.86
0.010
0.050
0.005
0.55
0.89
0.42
0.05
0.01
0.03


3066770












rf: 2478155 2512364
0.80
0.030
0.094
0.022
0.60
0.90
0.42
0.02
0.03
0.04


2956442












rf: 2478155 2512364
0.89
0.006
0.050
0.008
0.50
1.00
0.40
0.04
0.04
0.04


3005357












rf: 2478155 2512364
0.84
0.017
0.050
0.023
0.56
0.82
0.50
0.08
0.03
0.04


2651515












svm: 2478155 2364325
0.79
0.037
0.036
0.044
0.57
0.77
0.14
0.12
0.05
0.06


3066770












svm: 2478155 2364325
0.78
0.046
0.046
0.080
0.63
0.83
−0.01
0.02
0.06
0.09


3005357












knn: 2478155 3066770
0.78
0.045
0.287
0.072
0.56
0.82
0.47
0.06
0.08
0.08


3005357












knn: 3139092 2461837
0.85
0.012
0.019
0.013
0.43
0.83
0.36
0.33
0.02
0.04


2651515












rpart: 3139092 2512364
0.78
0.044
0.050
0.037
0.63
0.83
0.56
0.03
0.05
0.05


3005357












rf: 2789391 2461837
0.81
0.024
0.046
0.033
0.50
0.80
0.43
0.24
0.08
0.05


2512364












rf: 2789391 2512364
0.80
0.030
0.017
0.054
0.50
0.71
0.66
0.28
0.06
0.07


2364325












rf: 2789391 2512364
0.79
0.037
0.036
0.068
0.50
0.71
0.64
0.28
0.08
0.08


2956442












svm: 2789391 3066770
0.78
0.046
0.036
0.106
0.60
0.73
0.13
0.07
0.06
0.12


2651515












rf: 3463598 2461837
0.80
0.030
0.054
0.008
0.80
0.80
0.59
0.04
0.03
0.03


2512364












rpart: 3463598 2461837
0.79
0.036
0.238
0.042
0.67
0.79
0.55
0.05
0.07
0.06


2956442












rf: 3463598 2512364
0.79
0.037
0.025
0.023
0.46
0.86
0.33
0.13
0.02
0.06


3005357












rf: 2461837 2512364
0.79
0.039
0.143
0.027
0.55
0.89
0.42
0.06
0.05
0.05


2364325












svm: 2461837 2512364
0.80
0.030
0.094
0.036
0.56
0.82
−0.12
0.12
0.06
0.05


3005357












rf: 2461837 2512364
0.78
0.046
0.012
0.044
0.60
0.90
0.45
0.02
0.05
0.06


2651515












rf: 2512364 2364325
0.80
0.030
0.036
0.036
0.60
0.73
0.67
0.09
0.03
0.05


3066770












rf: 2512364 2364325
0.85
0.014
0.026
0.012
0.71
0.85
0.58
0.01
0.02
0.03


2956442












rf: 2512364 2364325
0.79
0.037
0.073
0.037
0.55
0.89
0.48
0.03
0.03
0.05


3005357












rf: 2512364 3066770
0.79
0.037
0.046
0.055
0.57
0.77
0.58
0.12
0.06
0.07


2956442












knn: 2512364 3066770
0.79
0.040
0.128
0.051
0.63
0.83
0.51
0.03
0.06
0.06


3005357












svm: 2512364 3066770
0.80
0.030
0.111
0.018
0.56
0.82
0.04
0.06
0.03
0.04


3005357












rf: 2512364 2956442
0.79
0.043
0.128
0.112
0.60
0.90
0.35
0.02
0.06
0.13


2651515












rpart: 2512364 2956442
0.89
0.005
0.022
0.002
0.50
1.00
0.33
0.05
0.03
0.03


2651515












svm: 2512364 3005357
0.80
0.030
0.025
0.090
0.41
1.00
−2.69
0.22
0.09
0.13


2651515












knn: 3326487 2458376
0.79
0.038
0.128
0.094
0.57
0.77
0.47
0.14
0.11
0.11


2332285 3005357












rpart: 3326487 3414753
0.21
0.027
0.373
0.081
0.14
0.54
0.40
0.20
0.15
0.11


2478155 3066770












rf: 3326487 2478155
0.78
0.047
0.102
0.065
0.63
0.83
0.41
0.02
0.05
0.08


3463598 2512364












svm: 3326487 2478155
0.78
0.046
0.036
0.209
0.40
0.80
−0.13
0.51
0.27
0.23


3066770 2651515












hdda: 3326487 3463598
0.82
0.019
0.046
0.010
0.23
0.43
0.46
0.10
0.01
0.04


2512364 3066770












svm: 3326487 2512364
0.82
0.019
0.012
0.052
0.67
0.91
−0.14
0.01
0.07
0.07


3066770 2651515












hdda: 2458376 3414753
0.78
0.046
0.094
0.051
0.57
0.77
0.48
0.14
0.08
0.07


2332285 2364325












svm: 2458376 3414753
0.79
0.037
0.094
0.065
0.57
0.77
0.08
0.14
0.09
0.08


2332285 2364325












svm: 2458376 3414753
0.78
0.046
0.203
0.042
0.50
0.80
0.05
0.20
0.06
0.06


2478155 2512364












nb: 2458376 3414753
0.78
0.046
0.046
0.079
0.57
0.77
0.40
0.12
0.08
0.09


2478155 3066770












rpart: 2458376 3414753
0.78
0.043
0.216
0.069
0.55
0.89
0.59
0.06
0.11
0.09


3139092 2512364












hdda: 2458376 3414753
0.78
0.046
0.094
0.031
0.75
0.75
0.53
0.06
0.05
0.06


3463598 2364325












rpart: 2458376 3414753
0.84
0.013
0.056
0.004
0.67
0.91
0.55
0.01
0.04
0.02


2461837 2512364












hdda: 2458376 3414753
0.80
0.030
0.094
0.036
0.75
0.75
0.53
0.06
0.06
0.06


2512364 2364325












nb: 2458376 3414753
0.80
0.030
0.111
0.038
0.63
0.83
0.46
0.03
0.05
0.05


2512364 2364325












svm: 2458376 3414753
0.80
0.030
0.073
0.028
0.56
0.82
0.38
0.06
0.03
0.04


2512364 2364325












svm: 2458376 3414753
0.84
0.014
0.054
0.004
0.54
1.00
−0.29
0.02
0.01
0.03


2512364 3066770












rpart: 2458376 3414753
0.77
0.044
0.439
0.039
0.56
0.82
0.50
0.05
0.05
0.05


2512364 3005357












rf: 2458376 3414753
0.83
0.019
0.115
0.024
0.56
0.82
0.54
0.04
0.03
0.05


2512364 2651515












nb: 2458376 3414753
0.80
0.030
0.073
0.020
0.63
0.83
0.38
0.03
0.03
0.04


2512364 2651515












nb: 2458376 3414753
0.78
0.046
0.094
0.073
0.57
0.77
0.45
0.14
0.08
0.08


2364325 3066770












nb: 2458376 3414753
0.81
0.024
0.046
0.028
0.63
0.83
0.34
0.03
0.04
0.04


3066770 2651515












rf: 2458376 2332285
0.85
0.014
0.008
0.014
0.55
0.89
0.49
0.05
0.03
0.04


2478155 2512364












svm: 2458376 2332285
0.78
0.046
0.094
0.063
0.57
0.77
0.01
0.14
0.09
0.07


2478155 2364325












rpart: 2458376 2332285
0.84
0.015
0.128
0.025
0.41
1.00
0.23
0.20
0.08
0.05


3139092 2461837












rf: 2458376 2332285
0.78
0.046
0.094
0.041
0.57
0.77
0.59
0.14
0.07
0.06


2789391 2512364












rf: 2458376 2332285
0.78
0.046
0.054
0.028
0.46
0.86
0.38
0.20
0.03
0.06


3463598 2512364












hdda: 2458376 2332285
0.78
0.046
0.094
0.057
0.50
0.71
0.47
0.31
0.05
0.08


3463598 2651515












hdda: 2458376 2332285
0.78
0.046
0.036
0.066
0.50
0.88
0.42
0.13
0.06
0.08


2461837 2651515












rf: 2458376 2332285
0.81
0.024
0.036
0.022
0.63
0.83
0.59
0.03
0.04
0.04


2512364 2364325












svm: 2458376 2332285
0.79
0.037
0.111
0.036
0.56
0.82
0.18
0.06
0.05
0.05


2512364 2364325












nb: 2458376 2332285
0.78
0.046
0.094
0.095
0.50
0.75
0.41
0.25
0.12
0.10


2512364 3066770












rf: 2458376 2332285
0.82
0.019
0.025
0.015
0.56
0.82
0.56
0.06
0.03
0.04


2512364 3005357












rf: 2458376 2332285
0.86
0.011
0.022
0.019
0.75
0.92
0.55
0.00
0.03
0.04


2512364 2651515












hdda: 2458376 2332285
0.78
0.046
0.169
0.058
0.50
0.88
0.42
0.13
0.05
0.08


2364325 2651515












svm: 2458376 2332285
0.78
0.046
0.046
0.090
0.50
0.75
−0.29
0.25
0.11
0.10


3066770 3005357












hdda: 2458376 2332285
0.78
0.046
0.073
0.041
0.75
0.75
0.50
0.02
0.04
0.06


2956442 2651515












rf: 2458376 2478155
0.84
0.014
0.036
0.010
0.47
1.00
0.40
0.07
0.02
0.05


2789391 2512364












knn: 2458376 2478155
0.81
0.025
0.022
0.040
0.75
0.92
0.50
0.00
0.07
0.06


2461837 2651515












rf: 2458376 2478155
0.85
0.011
0.012
0.012
0.50
1.00
0.43
0.04
0.02
0.04


2512364 2364325












nb: 2458376 2478155
0.79
0.037
0.073
0.039
0.56
0.82
0.38
0.06
0.04
0.05


2512364 2364325












svm: 2458376 2478155
0.80
0.030
0.111
0.036
0.57
0.77
0.24
0.16
0.06
0.06


2512364 2364325












rf: 2458376 2478155
0.85
0.012
0.056
0.006
0.47
1.00
0.36
0.07
0.01
0.03


2512364 3066770












nb: 2458376 2478155
0.79
0.037
0.137
0.047
0.50
0.75
0.39
0.25
0.05
0.06


2512364 3066770












knn: 2458376 2478155
0.80
0.029
0.056
0.016
0.67
0.91
0.50
0.01
0.05
0.03


2512364 3066770












svm: 2458376 2478155
0.89
0.003
0.017
0.003
0.63
0.83
0.16
0.05
0.02
0.02


2512364 3066770












rf: 2458376 2478155
0.78
0.046
0.137
0.029
0.46
0.86
0.43
0.18
0.04
0.05


2512364 2956442












rf: 2458376 2478155
0.82
0.022
0.056
0.019
0.47
1.00
0.33
0.07
0.02
0.05


2512364 3005357












rf: 2458376 2478155
0.82
0.019
0.036
0.016
0.55
0.89
0.50
0.04
0.03
0.04


2512364 2651515












knn: 2458376 2478155
0.78
0.046
0.262
0.049
0.67
0.79
0.55
0.02
0.04
0.06


2512364 2651515












knn: 2458376 2478155
0.79
0.042
0.238
0.046
0.63
0.83
0.48
0.03
0.03
0.06


2364325 2651515












svm: 2458376 2478155
0.78
0.046
0.073
0.045
0.67
0.79
−0.16
0.04
0.04
0.06


2364325 2651515












nb: 2458376 2478155
0.79
0.037
0.111
0.062
0.50
0.75
0.35
0.25
0.07
0.07


3066770 3005357












knn: 2458376 2478155
0.77
0.049
0.262
0.076
0.50
0.75
0.46
0.25
0.09
0.08


3066770 3005357












knn: 2458376 2478155
0.81
0.026
0.102
0.009
0.67
0.79
0.50
0.04
0.02
0.03


3066770 2651515












rpart: 2458376 3139092
0.77
0.047
0.050
0.122
0.45
0.78
0.52
0.31
0.15
0.13


2512364 2364325












nb: 2458376 3139092
0.78
0.046
0.137
0.058
0.50
0.80
0.37
0.13
0.07
0.07


2512364 3066770












nb: 2458376 3139092
0.78
0.046
0.073
0.028
0.56
0.82
0.39
0.06
0.03
0.05


2512364 2651515












rf: 2458376 2789391
0.84
0.014
0.017
0.022
0.67
0.91
0.53
0.01
0.03
0.05


2512364 2364325












svm: 2458376 2789391
0.79
0.037
0.036
0.026
0.67
0.91
0.45
0.01
0.01
0.07


2512364 2364325












rf: 2458376 2789391
0.81
0.024
0.005
0.022
0.67
0.91
0.52
0.01
0.04
0.05


2512364 3066770












knn: 2458376 2789391
0.77
0.050
0.262
0.067
0.50
0.75
0.49
0.25
0.09
0.08


2512364 3005357












rf: 2458376 2789391
0.84
0.017
0.022
0.031
0.60
0.90
0.52
0.02
0.03
0.06


2512364 2651515












knn: 2458376 2789391
0.81
0.010
0.056
0.005
0.67
0.91
0.50
0.01
0.03
0.02


3066770 2651515












rf: 2458376 3463598
0.81
0.024
0.007
0.032
0.46
0.86
0.43
0.18
0.05
0.07


2461837 2512364












rpart: 2458376 3463598
0.79
0.037
0.216
0.044
0.56
0.82
0.62
0.09
0.08
0.06


2461837 2512364












svm: 2458376 3463598
0.80
0.030
0.111
0.030
0.44
0.73
−0.20
0.44
0.05
0.05


2461837 3005357












hdda: 2458376 3463598
0.78
0.046
0.137
0.034
0.75
0.75
0.53
0.06
0.05
0.06


2512364 2364325












rf: 2458376 3463598
0.80
0.030
0.094
0.018
0.60
0.90
0.52
0.01
0.02
0.06


2512364 2364325












knn: 2458376 3463598
0.77
0.043
0.475
0.035
0.50
0.88
0.50
0.16
0.05
0.06


2512364 2364325












svm: 2458376 3463598
0.82
0.019
0.012
0.024
0.60
0.73
0.06
0.21
0.04
0.05


2512364 2364325












rf: 2458376 3463598
0.81
0.026
0.050
0.020
0.45
0.78
0.44
0.22
0.02
0.08


2512364 3066770












svm: 2458376 3463598
0.88
0.005
0.005
0.003
0.64
1.00
−0.45
0.00
0.01
0.03


2512364 3066770












knn: 2458376 3463598
0.85
0.013
0.026
0.011
0.56
0.82
0.50
0.07
0.03
0.03


2512364 3005357












rf: 2458376 3463598
0.78
0.047
0.056
0.061
0.67
0.91
0.43
0.01
0.04
0.08


2512364 2651515












rf: 2458376 2461837
0.78
0.047
0.216
0.040
0.55
0.89
0.50
0.06
0.07
0.06


2512364 2364325












knn: 2458376 2461837
0.80
0.033
0.287
0.109
0.50
0.75
0.52
0.25
0.12
0.11


2512364 2956442












knn: 2458376 2461837
0.79
0.039
0.102
0.039
0.55
0.89
0.49
0.06
0.07
0.06


2512364 3005357












rf: 2458376 2461837
0.78
0.047
0.115
0.031
0.71
0.85
0.60
0.02
0.07
0.05


2512364 2651515












nb: 2458376 2461837
0.78
0.046
0.073
0.022
0.55
0.89
0.34
0.06
0.04
0.05


2512364 2651515












knn: 2458376 2461837
0.79
0.035
0.128
0.096
0.50
0.88
0.45
0.11
0.10
0.12


2512364 2651515












rf: 2458376 2512364
0.85
0.013
0.022
0.007
0.67
0.91
0.52
0.01
0.01
0.03


2364325 3066770












nb: 2458376 2512364
0.82
0.019
0.046
0.041
0.63
0.83
0.45
0.03
0.05
0.05


2364325 3066770












svm: 2458376 2512364
0.84
0.014
0.025
0.004
0.83
0.86
0.75
0.00
0.01
0.02


2364325 3066770












rf: 2458376 2512364
0.84
0.014
0.073
0.024
0.50
0.88
0.49
0.07
0.02
0.05


2364325 3005357












nb: 2458376 2512364
0.80
0.030
0.169
0.042
0.56
0.82
0.43
0.07
0.06
0.06


2364325 3005357












knn: 2458376 2512364
0.79
0.035
0.511
0.015
0.57
0.77
0.64
0.08
0.01
0.06


2364325 3005357












svm: 2458376 2512364
0.79
0.037
0.073
0.037
0.56
0.82
0.39
0.07
0.06
0.06


2364325 3005357












nb: 2458376 2512364
0.78
0.046
0.169
0.029
0.63
0.83
0.40
0.03
0.03
0.04


2364325 2651515












nb: 2458376 2512364
0.79
0.037
0.137
0.039
0.56
0.82
0.36
0.06
0.06
0.05


3066770 3005357












svm: 2458376 2512364
0.79
0.037
0.137
0.028
0.56
0.82
−0.22
0.06
0.04
0.05


3066770 3005357












rf: 2458376 2512364
0.89
0.003
0.003
0.010
0.75
0.75
0.66
0.03
0.02
0.03


3066770 2651515












nb: 2458376 2512364
0.82
0.019
0.073
0.019
0.56
0.82
0.34
0.06
0.02
0.04


3066770 2651515












rf: 2458376 2512364
0.78
0.046
0.137
0.030
0.55
0.89
0.47
0.03
0.04
0.05


2956442 3005357












rf: 2458376 2512364
0.84
0.014
0.017
0.060
0.57
0.77
0.64
0.07
0.04
0.07


3005357 2651515












nb: 2458376 2512364
0.80
0.030
0.054
0.023
0.63
0.83
0.38
0.03
0.03
0.04


3005357 2651515












nb: 2458376 2364325
0.78
0.046
0.094
0.052
0.57
0.77
0.41
0.08
0.04
0.06


3066770 2651515












hdda: 3414753 2478155
0.78
0.046
0.111
0.122
0.44
0.73
0.48
0.39
0.13
0.13


3463598 2512364












rpart: 3414753 2478155
0.80
0.030
0.050
0.003
0.83
0.86
0.61
0.00
0.01
0.01


3463598 2512364












svm: 3414753 2478155
0.78
0.046
0.111
0.079
0.56
0.82
−0.07
0.06
0.07
0.09


2512364 2364325












rf: 3414753 2478155
0.80
0.036
0.143
0.056
0.50
0.80
0.44
0.11
0.06
0.07


2512364 3066770












knn: 3414753 2478155
0.78
0.046
0.064
0.102
0.50
0.75
0.54
0.25
0.10
0.11


2512364 3066770












svm: 3414753 2478155
0.81
0.024
0.111
0.022
0.57
0.77
0.78
0.09
0.02
0.04


2512364 3066770












svm: 3414753 2478155
0.78
0.046
0.073
0.052
0.63
0.83
−0.09
0.03
0.06
0.07


3066770 2651515












rpart: 3414753 2478155
0.79
0.032
0.262
0.021
0.50
1.00
0.46
0.04
0.04
0.07


2956442 3005357












rpart: 3414753 3139092
0.78
0.043
0.216
0.069
0.55
0.89
0.59
0.06
0.11
0.09


3463598 2512364












rpart: 3414753 3139092
0.78
0.043
0.216
0.069
0.55
0.89
0.59
0.06
0.11
0.09


2512364 3066770












rpart: 3414753 3139092
0.78
0.043
0.216
0.069
0.55
0.89
0.59
0.06
0.11
0.09


2512364 3005357












svm: 3414753 2789391
0.86
0.008
0.025
0.002
0.71
0.85
0.63
0.01
0.01
0.02


2461837 2512364












knn: 3414753 3463598
0.77
0.049
0.262
0.041
0.55
0.89
0.50
0.05
0.08
0.06


2461837 2651515












rpart: 3414753 2461837
0.79
0.029
0.115
0.013
0.71
0.85
0.63
0.03
0.05
0.02


2512364 3066770












rf: 3414753 2461837
0.83
0.019
0.064
0.058
0.50
0.75
0.54
0.25
0.07
0.07


2512364 3005357












rpart: 3414753 2461837
0.79
0.029
0.115
0.013
0.71
0.85
0.63
0.03
0.05
0.02


2512364 3005357












svm: 3414753 2512364
0.78
0.046
0.094
0.082
0.56
0.82
−0.17
0.06
0.08
0.09


2364325 3066770












svm: 3414753 2512364
0.84
0.014
0.046
0.073
0.56
0.82
0.00
0.06
0.08
0.08


3066770 3005357












rf: 3414753 2512364
0.79
0.037
0.169
0.044
0.63
0.83
0.55
0.02
0.05
0.06


2956442 3005357












rpart: 3414753 2512364
0.78
0.045
0.287
0.039
0.56
0.82
0.61
0.10
0.06
0.06


2956442 2651515












svm: 3414753 2512364
0.78
0.046
0.073
0.019
0.71
0.85
0.09
0.01
0.02
0.04


3005357 2651515












rpart: 2332285 2478155
0.81
0.027
0.216
0.061
0.57
0.77
0.43
0.15
0.08
0.07


2789391 3463598












rf: 2332285 2478155
0.84
0.017
0.050
0.016
0.80
0.80
0.52
0.02
0.02
0.05


3463598 2512364












rf: 2332285 2478155
0.82
0.019
0.036
0.015
0.63
0.83
0.51
0.02
0.01
0.03


2512364 2364325












rf: 2332285 2478155
0.81
0.026
0.064
0.030
0.56
0.82
0.46
0.06
0.03
0.06


2512364 3066770












rf: 2332285 2478155
0.79
0.043
0.056
0.028
0.60
0.90
0.46
0.02
0.05
0.05


2512364 2956442












rf: 2332285 2478155
0.79
0.043
0.128
0.030
0.60
0.90
0.49
0.01
0.04
0.05


2512364 3005357












rf: 2332285 3463598
0.79
0.037
0.017
0.074
0.50
0.75
0.49
0.37
0.10
0.09


2956442 3005357












knn: 2332285 3463598
0.82
0.016
0.238
0.009
0.63
0.83
0.50
0.01
0.01
0.03


3005357 2651515












rpart: 2332285 2512364
0.80
0.025
0.128
0.013
0.60
0.90
0.59
0.02
0.04
0.03


2364325 3066770












svm: 2332285 2512364
0.82
0.019
0.073
0.023
0.56
0.82
0.24
0.06
0.03
0.04


2364325 3066770












rf: 2332285 2512364
0.80
0.030
0.046
0.030
0.55
0.89
0.46
0.06
0.04
0.05


2364325 2956442












rf: 2332285 2512364
0.80
0.036
0.115
0.050
0.50
0.80
0.51
0.13
0.05
0.07


2364325 3005357












knn: 2332285 2512364
0.77
0.048
0.439
0.117
0.50
0.75
0.51
0.25
0.13
0.12


2956442 3005357












rpart: 2478155 3139092
0.84
0.014
0.050
0.029
0.55
0.89
0.54
0.07
0.08
0.06


3463598 2512364












svm: 2478155 3139092
0.84
0.014
0.007
0.053
0.35
0.67
−0.76
0.98
0.04
0.08


2461837 2651515












rpart: 2478155 3139092
0.84
0.014
0.050
0.046
0.55
0.89
0.62
0.06
0.10
0.07


2512364 3066770












rf: 2478155 3139092
0.78
0.047
0.022
0.102
0.40
0.80
0.33
0.46
0.12
0.12


2512364 2956442












rpart: 2478155 3139092
0.77
0.049
0.216
0.063
0.50
0.88
0.46
0.11
0.09
0.08


2512364 2956442












rpart: 2478155 2789391
0.79
0.040
0.216
0.035
0.67
0.79
0.48
0.06
0.05
0.05


3463598 2512364












rf: 2478155 2789391
0.78
0.046
0.073
0.048
0.55
0.89
0.43
0.06
0.09
0.06


2461837 2512364












svm: 2478155 2789391
0.78
0.046
0.073
0.028
0.71
0.85
0.47
0.01
0.01
0.08


2461837 2512364












rf: 2478155 2789391
0.82
0.019
0.017
0.018
0.67
0.91
0.49
0.01
0.03
0.04


2512364 2364325












rf: 2478155 2789391
0.79
0.037
0.036
0.030
0.67
0.91
0.42
0.01
0.05
0.05


2512364 3066770












rf: 2478155 3463598
0.82
0.024
0.056
0.028
0.46
0.86
0.42
0.18
0.06
0.05


2461837 2512364












rpart: 2478155 3463598
0.79
0.036
0.115
0.016
0.71
0.85
0.54
0.01
0.05
0.03


2461837 2512364












rf: 2478155 3463598
0.84
0.014
0.046
0.010
0.50
0.71
0.55
0.25
0.01
0.04


2512364 2364325












rpart: 2478155 3463598
0.82
0.019
0.050
0.002
0.83
0.86
0.62
0.00
0.01
0.01


2512364 2364325












rf: 2478155 3463598
0.80
0.030
0.137
0.022
0.56
0.82
0.41
0.09
0.02
0.07


2512364 3066770












rf: 2478155 3463598
0.81
0.026
0.022
0.012
0.60
0.90
0.44
0.03
0.03
0.03


2512364 2956442












rf: 2478155 3463598
0.79
0.043
0.143
0.012
0.67
0.79
0.49
0.06
0.01
0.05


2512364 3005357












rf: 2478155 2461837
0.78
0.046
0.137
0.037
0.43
0.83
0.33
0.30
0.07
0.06


2512364 2364325












rf: 2478155 2461837
0.81
0.026
0.056
0.021
0.55
0.89
0.43
0.05
0.04
0.04


2512364 2956442












rf: 2478155 2512364
0.85
0.014
0.022
0.006
0.67
0.91
0.46
0.01
0.01
0.03


2364325 3066770












svm: 2478155 2512364
0.78
0.046
0.111
0.039
0.44
0.73
0.05
0.47
0.05
0.06


2364325 3066770












rf: 2478155 2512364
0.84
0.014
0.012
0.006
0.67
0.91
0.49
0.01
0.01
0.02


2364325 2956442












rf: 2478155 2512364
0.81
0.024
0.046
0.040
0.60
0.90
0.44
0.02
0.02
0.06


2364325 2651515












rf: 2478155 2512364
0.85
0.011
0.036
0.013
0.50
0.88
0.38
0.10
0.03
0.04


3066770 2956442












rf: 2478155 2512364
0.81
0.024
0.036
0.014
0.63
0.83
0.54
0.02
0.02
0.03


3066770 3005357












svm: 2478155 2512364
0.78
0.046
0.111
0.037
0.56
0.82
0.09
0.06
0.04
0.06


3066770 3005357












rf: 2478155 2512364
0.78
0.047
0.115
0.088
0.60
0.90
0.33
0.02
0.04
0.11


3066770 2651515












svm: 2478155 2512364
0.80
0.030
0.017
0.043
0.60
0.73
−0.01
0.07
0.02
0.06


3066770 2651515












rf: 2478155 2512364
0.82
0.024
0.056
0.008
0.58
1.00
0.43
0.01
0.02
0.03


2956442 3005357












rpart: 2478155 2512364
0.77
0.036
0.262
0.028
0.50
1.00
0.44
0.04
0.16
0.17


2956442 3005357












rf: 2478155 2512364
0.80
0.032
0.128
0.030
0.55
0.89
0.45
0.05
0.04
0.05


2956442 2651515












rpart: 2478155 2512364
0.79
0.034
0.128
0.015
0.60
0.90
0.62
0.02
0.05
0.04


2956442 2651515












svm: 2478155 2512364
0.80
0.030
0.094
0.029
0.56
0.82
−0.08
0.06
0.03
0.04


3005357 2651515












rpart: 3139092 2789391
0.78
0.044
0.050
0.184
0.46
0.86
0.53
0.22
0.24
0.19


3463598 2512364












knn: 3139092 2789391
0.81
0.021
0.050
0.009
0.83
0.86
0.50
0.00
0.01
0.03


2461837 2651515












svm: 3139092 3463598
0.79
0.037
0.036
0.116
0.40
0.80
−0.38
0.46
0.14
0.14


2461837 3005357












knn: 3139092 3463598
0.77
0.025
0.128
0.018
0.60
0.90
0.50
0.03
0.06
0.04


2461837 2651515












svm: 3139092 3463598
0.84
0.014
0.012
0.011
0.55
0.89
−0.08
0.06
0.01
0.05


2461837 2651515












rpart: 3139092 3463598
0.84
0.014
0.022
0.008
0.60
0.90
0.52
0.04
0.04
0.03


2512364 3066770












rpart: 3139092 3463598
0.83
0.016
0.022
0.005
0.75
0.92
0.54
0.00
0.03
0.02


2512364 3005357












knn: 3139092 3463598
0.74
0.045
0.238
0.036
0.63
0.83
0.50
0.05
0.08
0.05


3066770 2651515












knn: 3139092 2512364
0.80
0.034
0.216
0.029
0.67
0.79
0.59
0.05
0.04
0.05


3066770 3005357












rpart: 3139092 2512364
0.78
0.044
0.050
0.037
0.63
0.83
0.56
0.03
0.05
0.05


2956442 3005357












svm: 3139092 2512364
0.78
0.046
0.257
0.056
0.14
0.54
−0.18
0.18
0.07
0.08


2956442 2651515












rf: 2789391 2461837
0.79
0.037
0.046
0.030
0.50
0.80
0.50
0.24
0.06
0.05


2512364 2364325












rf: 2789391 2461837
0.79
0.043
0.128
0.032
0.55
0.89
0.44
0.06
0.08
0.05


2512364 2651515












rf: 2789391 2512364
0.81
0.029
0.026
0.093
0.50
0.71
0.60
0.28
0.09
0.10


2364325 3066770












rf: 2789391 2512364
0.82
0.022
0.026
0.042
0.50
0.71
0.61
0.28
0.05
0.06


2364325 2956442












rf: 3463598 2461837
0.81
0.024
0.046
0.020
0.56
0.82
0.48
0.15
0.03
0.05


2512364 2364325












rf: 3463598 2461837
0.79
0.037
0.073
0.015
0.63
0.83
0.49
0.07
0.04
0.03


2512364 2956442












rf: 3463598 2512364
0.87
0.009
0.026
0.013
0.67
0.71
0.75
0.20
0.02
0.05


2364325 2956442












rf: 3463598 2512364
0.78
0.047
0.056
0.030
0.50
0.88
0.34
0.07
0.02
0.06


3066770 3005357












rf: 3463598 2512364
0.85
0.011
0.017
0.006
0.58
1.00
0.41
0.01
0.02
0.03


2956442 3005357












knn: 3463598 2956442
0.78
0.046
0.238
0.086
0.50
0.71
0.53
0.33
0.08
0.09


3005357 2651515












rf: 2461837 2512364
0.78
0.046
0.203
0.046
0.67
0.79
0.60
0.05
0.06
0.06


2364325 3066770












rf: 2461837 2512364
0.78
0.047
0.128
0.043
0.50
0.75
0.55
0.25
0.06
0.06


2364325 2956442












rf: 2461837 2512364
0.78
0.046
0.025
0.037
0.55
0.89
0.42
0.06
0.05
0.06


2364325 2651515












rf: 2461837 2512364
0.79
0.037
0.094
0.038
0.50
0.75
0.55
0.25
0.06
0.05


2956442 3005357












rf: 2461837 2512364
0.80
0.030
0.005
0.079
0.67
0.91
0.42
0.01
0.10
0.09


3005357 2651515












svm: 2512364 2364325
0.78
0.046
0.036
0.074
0.71
0.85
0.89
0.01
0.09
0.09


3066770 2956442












svm: 2512364 2364325
0.81
0.024
0.036
0.022
0.71
0.85
0.65
0.01
0.02
0.04


3066770 3005357












rf: 2512364 3066770
0.80
0.030
0.036
0.026
0.63
0.83
0.59
0.02
0.03
0.04


2956442 3005357












rf: 2512364 2956442
0.82
0.024
0.026
0.030
0.58
1.00
0.36
0.01
0.03
0.05


3005357 2651515












knn: 2512364 2956442
0.77
0.043
0.439
0.030
0.56
0.82
0.50
0.07
0.05
0.06


3005357 2651515












rpart: 2512364 2956442
0.80
0.031
0.143
0.019
0.63
0.83
0.56
0.03
0.03
0.03


3005357 2651515












svm: 2512364 2956442
0.82
0.019
0.046
0.032
0.71
0.85
0.13
0.01
0.05
0.05


3005357 2651515









Performance of pairwise, threewise and fourwise combinations of the 15 markers across different metrics for the Recurrence endpoint for pT2 patients (organ-confined disease). All classifiers have a Wilcox P-value <=0.05



















TABLE 14














UVA
UVA




WILCOX
KS
T-TEST



KM
HR
OR




P-
P-
P-



P-
P-
P-


CLASSIFIER
AUC
VALUE
VALUE
VALUE
PPV
NPV
CUTOFF
VALUE
VALUE
VALUE

























knn: 2458376
0.80
0.022
0.137
0.030
0.83
0.38
0.53
0.32
0.11
0.05


2364325












rf: 2458376
0.77
0.046
0.051
0.026
0.86
0.45
0.52
0.21
0.15
0.04


3005357












rpart: 2478155
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3005357












rpart: 3139092
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3005357












knn: 2512364
0.77
0.040
0.097
0.066
0.92
0.50
0.50
0.05
0.11
0.08


3005357












rpart: 2512364
0.79
0.026
0.068
0.012
0.91
0.43
0.62
0.11
0.03
0.03


3005357












rpart: 2364325
0.77
0.038
0.097
0.032
0.88
0.63
0.37
0.02
0.07
0.05


3005357












rpart: 3066770
0.81
0.010
0.097
0.006
0.92
0.50
0.56
0.03
0.02
0.02


3005357












rpart: 2956442
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3005357












rf: 3005357
0.80
0.023
0.016
0.015
0.92
0.50
0.45
0.05
0.09
0.03


2651515












knn: 3005357
0.76
0.045
0.137
0.062
0.89
0.38
0.50
0.53
0.37
0.08


2651515












knn: 3326487
0.75
0.046
0.292
0.029
0.87
0.50
0.50
0.20
0.13
0.05


2332285 2512364












rpart: 3326487
0.75
0.049
0.097
0.093
0.88
0.35
0.38
0.08
0.03
0.12


2364325 3005357












rpart: 3326487
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3066770 3005357












rpart: 3326487
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


3005357 2651515












svm: 2458376
0.78
0.034
0.043
0.103
0.84
0.67
−0.28
0.09
0.19
0.11


2332285 3139092












knn: 2458376
0.79
0.028
0.126
0.035
0.81
0.44
0.50
0.45
0.20
0.05


2332285 3005357












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2332285 3005357












svm: 2458376
0.76
0.047
0.046
0.021
0.50
0.13
−0.59
0.05
0.13
0.07


2478155 2461837












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2478155 3005357












knn: 2458376
0.77
0.035
0.089
0.056
0.77
0.67
0.32
0.27
0.15
0.08


3139092 3463598












knn: 2458376
0.78
0.036
0.219
0.029
0.78
0.43
0.48
0.52
0.10
0.05


3139092 3005357












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3139092 3005357












knn: 2458376
0.81
0.017
0.126
0.013
0.92
0.50
0.50
0.09
0.08
0.03


2512364 2956442












rf: 2458376
0.80
0.023
0.016
0.032
0.83
0.32
0.70
0.72
0.14
0.05


2512364 3005357












knn: 2458376
0.80
0.023
0.236
0.016
0.90
0.40
0.61
0.63
0.17
0.04


2512364 3005357












svm: 2458376
0.77
0.041
0.043
0.028
0.87
0.50
−0.05
0.19
0.17
0.04


2512364 3005357












rf: 2458376
0.76
0.047
0.043
0.043
0.92
0.46
0.56
0.18
0.27
0.06


2512364 2651515












knn: 2458376
0.81
0.021
0.097
0.010
0.86
0.45
0.51
0.16
0.08
0.02


2364325 3005357












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2364325 3005357












knn: 2458376
0.80
0.023
0.034
0.026
0.93
0.60
0.50
0.03
0.19
0.04


2364325 2651515












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3066770 3005357












svm: 2458376
0.80
0.021
0.043
0.019
0.92
0.46
1.16
0.37
0.15
0.04


3066770 2651515












rf: 2458376
0.80
0.023
0.051
0.028
0.83
0.32
0.72
0.94
0.29
0.05


3005357 2651515












rpart: 2458376
0.80
0.024
0.068
0.038
0.92
0.46
0.49
0.09
0.13
0.06


3005357 2651515












svm: 3414753
0.78
0.034
0.008
0.105
0.70
0.20
−0.16
0.57
0.09
0.12


2478155 2651515












rf: 3414753
0.76
0.049
0.097
0.043
0.89
0.38
0.62
0.37
0.16
0.06


2512364 3005357












rpart: 3414753
0.80
0.019
0.068
0.017
0.92
0.46
0.44
0.06
0.05
0.04


2512364 3005357












knn: 3414753
0.77
0.035
0.074
0.023
0.85
0.42
0.50
0.42
0.16
0.04


2512364 2651515












rpart: 3414753
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2364325 3005357












rpart: 3414753
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2956442 3005357












rf: 3414753
0.79
0.032
0.025
0.023
0.80
0.30
0.70
0.70
0.24
0.04


3005357 2651515












svm: 2332285
0.76
0.047
0.020
0.039
0.93
0.55
0.16
0.05
0.06
0.06


3139092 2461837












knn: 2332285
0.78
0.029
0.313
0.012
0.89
0.38
0.70
0.23
0.06
0.03


3139092 2512364












rpart: 2332285
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2789391 3005357












knn: 2332285
0.76
0.048
0.292
0.040
0.87
0.50
0.55
0.19
0.26
0.05


2512364 2651515












rpart: 2332285
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3066770 3005357












rpart: 2332285
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


3005357 2651515












svm: 2478155
0.79
0.029
0.014
0.048
0.70
0.20
−0.15
0.48
0.02
0.07


3139092 3005357












svm: 2478155
0.76
0.047
0.068
0.040
0.91
0.43
0.45
0.17
0.10
0.06


2512364 3005357












rpart: 2478155
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2956442 3005357












knn: 2478155
0.81
0.021
0.016
0.034
0.86
0.33
0.56
0.91
0.28
0.06


3005357 2651515












rpart: 2478155
0.76
0.046
0.034
0.016
0.91
0.43
0.60
0.17
0.07
0.04


3005357 2651515












knn: 3139092
0.82
0.013
0.089
0.010
0.83
0.57
0.50
0.10
0.01
0.02


3463598 2956442












rpart: 3139092
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2364325 3005357












rpart: 3139092
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3066770 3005357












rpart: 3139092
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2956442 3005357












rpart: 2789391
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3463598 3005357












rpart: 2789391
0.76
0.027
0.068
0.008
0.93
0.55
0.48
0.01
0.01
0.02


2512364 3005357












svm: 2789391
0.76
0.047
0.005
0.251
0.83
0.38
−0.27
0.32
0.44
0.25


2512364 3005357












rpart: 2789391
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2956442 3005357












rpart: 2789391
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


3005357 2651515












rf: 3463598
0.77
0.046
0.051
0.037
0.89
0.38
0.67
0.22
0.12
0.06


2512364 3005357












svm: 3463598
0.77
0.041
0.026
0.185
0.92
0.46
−0.27
0.15
0.58
0.20


2956442 3005357












rf: 3463598
0.80
0.021
0.014
0.044
0.89
0.38
0.61
0.50
0.28
0.07


3005357 2651515












knn: 3463598
0.76
0.044
0.381
0.026
0.89
0.38
0.70
0.46
0.21
0.05


3005357 2651515












svm: 2461837
0.77
0.041
0.130
0.030
0.80
0.60
−3.54
0.16
0.13
0.05


2512364 3066770












rf: 2461837
0.76
0.047
0.020
0.052
0.88
0.63
0.35
0.05
0.28
0.06


2512364 2651515












svm: 2461837
0.78
0.034
0.111
0.296
0.76
0.50
−4.24
0.31
0.21
0.31


3066770 3005357












rf: 2461837
0.79
0.032
0.074
0.050
0.86
0.45
0.45
0.18
0.22
0.07


3005357 2651515












rpart: 2512364
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2364325 3005357












rpart: 2512364
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2956442 3005357












rf: 2512364
0.81
0.018
0.003
0.017
0.93
0.60
0.37
0.02
0.18
0.04


3005357 2651515












rpart: 2512364
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


3005357 2651515












knn: 2364325
0.77
0.044
0.236
0.059
0.86
0.33
0.61
0.91
0.45
0.08


3005357 2651515












rpart: 3066770
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2956442 3005357












rf: 3066770
0.79
0.032
0.025
0.075
0.88
0.35
0.59
0.73
0.38
0.11


3005357 2651515












rf: 2956442
0.79
0.029
0.020
0.035
0.93
0.60
0.39
0.01
0.16
0.05


3005357 2651515












rpart: 3326487
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2458376 2364325












3005357












rpart: 3326487
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2458376 3066770












3005357












rf: 3326487
0.76
0.049
0.074
0.067
0.88
0.35
0.64
0.50
0.31
0.09


2458376 3005357












2651515












rpart: 3326487
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3414753 3139092












3005357












rpart: 3326487
0.82
0.007
0.068
0.004
0.93
0.55
0.55
0.01
0.01
0.02


3414753 2512364












3005357












rpart: 3326487
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3414753 3066770












3005357












rpart: 3326487
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3414753 2956442












3005357












svm: 3326487
0.80
0.021
0.020
0.050
0.90
0.40
0.53
0.23
0.02
0.06


2332285 3139092












2512364












rf: 3326487
0.79
0.029
0.025
0.117
0.88
0.35
0.59
0.73
0.45
0.14


2478155 3005357












2651515












rpart: 3326487
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3139092 3463598












3005357












rpart: 3326487
0.82
0.007
0.068
0.004
0.93
0.55
0.55
0.01
0.01
0.02


2789391 2512364












3005357












rpart: 3326487
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2789391 3066770












3005357












rf: 3326487
0.78
0.034
0.014
0.112
0.86
0.33
0.65
0.91
0.42
0.13


2789391 3005357












2651515












rf: 3326487
0.76
0.049
0.074
0.129
0.86
0.33
0.62
0.91
0.47
0.15


3463598 3005357












2651515












knn: 3326487
0.73
0.043
0.219
0.036
0.92
0.46
0.50
0.07
0.07
0.06


2461837 3066770












2651515












rpart: 3326487
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2512364 2364325












3005357












rf: 3326487
0.84
0.008
0.001
0.018
0.88
0.35
0.55
0.44
0.14
0.04


2512364 3005357












2651515












rf: 3326487
0.78
0.037
0.025
0.106
0.88
0.35
0.50
0.73
0.43
0.13


2364325 3005357












2651515












rpart: 3326487
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


2364325 3005357












2651515












rf: 3326487
0.77
0.046
0.051
0.101
0.89
0.38
0.54
0.54
0.37
0.12


3066770 3005357












2651515












rpart: 3326487
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


3066770 3005357












2651515












rf: 3326487
0.78
0.037
0.051
0.176
0.80
0.33
0.46
0.99
0.51
0.18


2956442 3005357












2651515












rpart: 3326487
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


2956442 3005357












2651515












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3414753 2332285












3005357












knn: 2458376
0.75
0.048
0.457
0.037
0.55
0.14
0.50
0.10
0.04
0.06


3414753 2478155












2789391












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3414753 3139092












3005357












rf: 2458376
0.76
0.047
0.068
0.041
0.92
0.46
0.54
0.13
0.23
0.06


3414753 2512364












3005357












knn: 2458376
0.76
0.048
0.097
0.031
0.86
0.45
0.53
0.39
0.18
0.05


3414753 2364325












3005357












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3414753 2364325












3005357












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3414753 3066770












3005357












rf: 2458376
0.77
0.040
0.074
0.050
0.86
0.33
0.69
0.91
0.38
0.07


3414753 3005357












2651515












knn: 2458376
0.77
0.041
0.074
0.017
0.82
0.50
0.43
0.36
0.21
0.03


3414753 3005357












2651515












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2332285 2478155












3005357












knn: 2458376
0.84
0.008
0.051
0.007
0.91
0.43
0.64
0.32
0.11
0.03


2332285 3139092












2512364












svm: 2458376
0.77
0.041
0.033
0.024
0.87
0.50
0.04
0.11
0.09
0.04


2332285 3139092












2512364












svm: 2458376
0.76
0.047
0.056
0.048
0.92
0.50
−0.09
0.10
0.24
0.06


2332285 2512364












2956442












rf: 2458376
0.76
0.047
0.043
0.058
0.88
0.56
0.47
0.08
0.31
0.07


2332285 2512364












2651515












knn: 2458376
0.81
0.017
0.174
0.019
0.87
0.50
0.50
0.19
0.15
0.03


2332285 2364325












3005357












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2332285 3066770












3005357












rf: 2458376
0.85
0.008
0.007
0.005
0.93
0.60
0.45
0.02
0.10
0.03


2332285 3005357












2651515












rpart: 2458376
0.79
0.025
0.097
0.044
0.91
0.43
0.56
0.16
0.12
0.06


2332285 3005357












2651515












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2478155 2789391












3005357












rf: 2458376
0.76
0.049
0.051
0.090
0.93
0.55
0.55
0.03
0.28
0.10


2478155 2512364












2651515












knn: 2458376
0.79
0.031
0.051
0.022
0.87
0.50
0.51
0.19
0.11
0.04


2478155 2364325












3005357












knn: 2458376
0.78
0.034
0.051
0.051
0.90
0.40
0.61
0.75
0.47
0.07


2478155 3066770












2651515












rf: 2458376
0.76
0.047
0.095
0.047
0.86
0.33
0.63
0.91
0.37
0.07


2478155 3005357












2651515












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3139092 2789391












3005357












knn: 2458376
0.86
0.005
0.046
0.004
0.88
0.63
0.50
0.06
0.01
0.02


3139092 3463598












2956442












svm: 2458376
0.81
0.017
0.020
0.026
0.93
0.55
0.04
0.04
0.08
0.04


3139092 3463598












2956442












rf: 2458376
0.77
0.043
0.016
0.058
0.90
0.40
0.56
0.17
0.23
0.08


3139092 3463598












2651515












knn: 2458376
0.78
0.035
0.137
0.012
0.91
0.43
0.61
0.15
0.07
0.03


3139092 2512364












3005357












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3139092 2364325












3005357












knn: 2458376
0.80
0.024
0.097
0.024
0.80
0.60
0.35
0.25
0.22
0.04


3139092 2364325












2651515












svm: 2458376
0.76
0.047
0.068
0.066
0.85
0.42
−0.13
0.75
0.48
0.08


3139092 2364325












2651515












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3139092 2956442












3005357












rf: 2458376
0.76
0.047
0.014
0.066
0.85
0.42
0.44
0.58
0.33
0.08


2789391 3005357












2651515












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3463598 2512364












3005357












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3463598 2364325












3005357












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3463598 3066770












3005357












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3463598 2956442












3005357












rf: 2458376
0.81
0.017
0.014
0.019
0.92
0.50
0.51
0.16
0.22
0.04


3463598 3005357












2651515












rf: 2458376
0.77
0.043
0.025
0.033
0.86
0.45
0.50
0.18
0.18
0.05


2461837 3005357












2651515












rf: 2458376
0.80
0.023
0.016
0.030
0.92
0.50
0.49
0.12
0.31
0.05


2512364 2364325












2651515












knn: 2458376
0.79
0.027
0.126
0.019
0.89
0.38
0.64
0.25
0.09
0.04


2512364 3066770












3005357












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2512364 3066770












3005357












knn: 2458376
0.78
0.033
0.025
0.067
0.85
0.42
0.54
0.34
0.22
0.08


2512364 2956442












3005357












rf: 2458376
0.84
0.008
0.001
0.008
0.93
0.55
0.43
0.04
0.09
0.03


2512364 3005357












2651515












knn: 2458376
0.78
0.033
0.051
0.033
0.86
0.45
0.50
0.32
0.26
0.05


2512364 3005357












2651515












knn: 2458376
0.77
0.035
0.126
0.052
0.92
0.50
0.50
0.08
0.34
0.07


2364325 3066770












2651515












knn: 2458376
0.81
0.021
0.174
0.027
0.85
0.42
0.51
0.34
0.11
0.04


2364325 2956442












3005357












rpart: 2458376
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2364325 2956442












3005357












rf: 2458376
0.83
0.012
0.008
0.025
0.86
0.33
0.62
0.91
0.30
0.05


2364325 3005357












2651515












knn: 2458376
0.77
0.045
0.051
0.026
0.88
0.56
0.45
0.13
0.18
0.04


2364325 3005357












2651515












svm: 2458376
0.81
0.017
0.046
0.013
0.87
0.50
−0.04
0.22
0.14
0.03


2364325 3005357












2651515












rf: 2458376
0.80
0.021
0.046
0.039
0.86
0.33
0.68
0.91
0.33
0.06


3066770 3005357












2651515












rf: 2458376
0.79
0.029
0.008
0.038
0.92
0.50
0.45
0.09
0.25
0.06


2956442 3005357












2651515












svm: 3414753
0.78
0.034
0.085
0.053
0.83
0.57
−0.12
0.09
0.03
0.05


2332285 3139092












2512364












knn: 3414753
0.76
0.046
0.219
0.033
0.92
0.46
0.59
0.18
0.17
0.05


2332285 2512364












3005357












knn: 3414753
0.76
0.040
0.219
0.041
0.81
0.44
0.50
0.28
0.10
0.05


2332285 2512364












2651515












rpart: 3414753
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2478155 3463598












3005357












rf: 3414753
0.77
0.040
0.097
0.072
0.88
0.35
0.57
0.73
0.41
0.10


2478155 3005357












2651515












rpart: 3414753
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3139092 2789391












3005357












knn: 3414753
0.78
0.032
0.219
0.056
0.92
0.46
0.61
0.07
0.06
0.08


3139092 2461837












3005357












knn: 3414753
0.76
0.046
0.570
0.019
0.83
0.38
0.59
0.43
0.09
0.04


3139092 2364325












3005357












rf: 3414753
0.79
0.027
0.016
0.015
0.88
0.63
0.43
0.06
0.13
0.03


3139092 3005357












2651515












rf: 3414753
0.76
0.047
0.085
0.064
0.83
0.57
0.36
0.10
0.31
0.08


2789391 2512364












2651515












rf: 3414753
0.79
0.025
0.020
0.040
0.75
0.29
0.82
0.59
0.29
0.06


2512364 3005357












2651515












rpart: 3414753
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2364325 3066770












3005357












rf: 3414753
0.77
0.042
0.025
0.108
0.88
0.35
0.49
0.73
0.48
0.14


2364325 3005357












2651515












rf: 3414753
0.78
0.034
0.033
0.050
0.86
0.33
0.69
0.91
0.32
0.07


3066770 3005357












2651515












knn: 3414753
0.75
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0.021
0.88
0.56
0.50
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3066770 3005357












2651515












rpart: 3414753
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


3066770 3005357












2651515












rpart: 2332285
0.82
0.007
0.068
0.004
0.93
0.55
0.55
0.01
0.01
0.02


2478155 2512364












3005357












knn: 2332285
0.77
0.044
0.292
0.035
0.87
0.50
0.50
0.20
0.15
0.05


3139092 2789391












2512364












rpart: 2332285
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3139092 2789391












3005357












svm: 2332285
0.77
0.041
0.043
0.058
0.89
0.38
0.78
0.22
0.24
0.07


3139092 3463598












2461837












svm: 2332285
0.76
0.047
0.095
0.029
0.82
0.50
0.10
0.22
0.06
0.04


3139092 3463598












2512364












knn: 2332285
0.75
0.050
0.174
0.065
0.90
0.40
0.70
0.13
0.20
0.08


3139092 3463598












2956442












knn: 2332285
0.78
0.035
0.292
0.027
0.82
0.50
0.50
0.24
0.18
0.04


3139092 3463598












3005357












rpart: 2332285
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3139092 3463598












3005357












svm: 2332285
0.78
0.034
0.043
0.021
0.92
0.50
0.20
0.01
0.02
0.05


3139092 2461837












2512364












svm: 2332285
0.79
0.029
0.043
0.043
0.77
0.67
−0.61
0.27
0.14
0.07


3139092 2461837












2651515












knn: 2332285
0.77
0.044
0.097
0.033
0.87
0.50
0.52
0.19
0.21
0.05


3139092 2512364












2364325












svm: 2332285
0.77
0.041
0.130
0.026
0.80
0.60
−0.78
0.18
0.09
0.05


3139092 2512364












2364325












svm: 2332285
0.78
0.034
0.068
0.043
0.83
0.57
0.03
0.09
0.03
0.05


3139092 2512364












3005357












svm: 2332285
0.78
0.034
0.056
0.039
0.86
0.45
−0.14
0.30
0.06
0.05


3139092 2512364












2651515












knn: 2332285
0.77
0.038
0.126
0.041
0.78
0.43
0.44
0.65
0.29
0.06


3139092 2364325












2651515












knn: 2332285
0.77
0.040
0.457
0.029
0.86
0.45
0.50
0.35
0.19
0.05


3139092 2956442












2651515












rpart: 2332285
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2789391 3463598












3005357












svm: 2332285
0.83
0.012
0.020
0.013
0.92
0.46
−0.08
0.15
0.07
0.04


2789391 2512364












2364325












rpart: 2332285
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3463598 2956442












3005357












rf: 2332285
0.78
0.034
0.051
0.031
0.87
0.50
0.44
0.19
0.21
0.05


3463598 3005357












2651515












rpart: 2332285
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2512364 3066770












3005357












rpart: 2332285
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2512364 2956442












3005357












rf: 2332285
0.80
0.023
0.016
0.017
0.93
0.60
0.41
0.02
0.17
0.03


2512364 3005357












2651515












knn: 2332285
0.82
0.008
0.016
0.017
0.94
0.67
0.50
0.00
0.10
0.03


2512364 3005357












2651515












rpart: 2332285
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2364325 3066770












3005357












rpart: 2332285
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


2364325 3005357












2651515












rpart: 2332285
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


2956442 3005357












2651515












rpart: 2478155
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3139092 2789391












3005357












svm: 2478155
0.78
0.034
0.043
0.168
1.00
0.29
5.96
0.00
0.01
0.11


3139092 3463598












2956442












rpart: 2478155
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3139092 3463598












3005357












knn: 2478155
0.80
0.024
0.236
0.009
0.80
0.60
0.44
0.25
0.12
0.03


3139092 2364325












3005357












rpart: 2478155
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2789391 3066770












3005357












rpart: 2478155
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2789391 2956442












3005357












rf: 2478155
0.78
0.034
0.014
0.094
0.88
0.35
0.48
0.73
0.44
0.12


2789391 3005357












2651515












rpart: 2478155
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3463598 2512364












3005357












rpart: 2478155
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3463598 3066770












3005357












rpart: 2478155
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3463598 2956442












3005357












rf: 2478155
0.80
0.023
0.034
0.048
0.89
0.38
0.60
0.32
0.32
0.07


3463598 3005357












2651515












svm: 2478155
0.76
0.047
0.130
0.029
0.89
0.38
0.30
0.26
0.09
0.05


2461837 2512364












3066770












rpart: 2478155
0.77
0.036
0.068
0.072
0.79
0.50
0.43
0.30
0.12
0.08


2512364 2364325












3005357












svm: 2478155
0.78
0.034
0.043
0.056
0.83
0.32
2.30
0.71
0.29
0.08


2512364 2364325












2651515












rpart: 2478155
0.76
0.045
0.068
0.056
0.88
0.35
0.62
0.48
0.21
0.08


2512364 2956442












2651515












rf: 2478155
0.83
0.009
0.001
0.013
0.93
0.55
0.46
0.03
0.14
0.03


2512364 3005357












2651515












knn: 2478155
0.76
0.042
0.068
0.045
0.93
0.55
0.50
0.04
0.08
0.06


2512364 3005357












2651515












rpart: 2478155
0.81
0.018
0.007
0.007
0.93
0.55
0.53
0.06
0.05
0.02


2512364 3005357












2651515












svm: 2478155
0.80
0.021
0.008
0.027
0.92
0.50
0.18
0.10
0.19
0.04


2512364 3005357












2651515












rpart: 2478155
0.81
0.010
0.097
0.006
0.92
0.50
0.56
0.03
0.02
0.02


2364325 3066770












3005357












rpart: 2478155
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2364325 2956442












3005357












rf: 2478155
0.83
0.012
0.014
0.076
0.88
0.35
0.55
0.73
0.41
0.11


2364325 3005357












2651515












svm: 2478155
0.77
0.041
0.008
0.073
0.91
0.43
0.16
0.21
0.56
0.09


2364325 3005357












2651515












rpart: 2478155
0.81
0.010
0.097
0.006
0.92
0.50
0.56
0.03
0.02
0.02


3066770 2956442












3005357












rf: 2478155
0.81
0.021
0.034
0.045
0.86
0.33
0.66
0.91
0.32
0.07


3066770 3005357












2651515












knn: 2478155
0.77
0.038
0.097
0.075
0.88
0.35
0.58
0.73
0.40
0.09


3066770 3005357












2651515












rpart: 2478155
0.77
0.040
0.034
0.011
0.92
0.46
0.61
0.09
0.03
0.03


2956442 3005357












2651515












knn: 3139092
0.77
0.042
0.097
0.038
0.86
0.45
0.50
0.16
0.15
0.05


2789391 2512364












2364325












knn: 3139092
0.78
0.034
0.137
0.028
0.82
0.36
0.54
0.45
0.10
0.05


2789391 2364325












3005357












knn: 3139092
0.75
0.027
0.174
0.021
0.88
0.56
0.50
0.05
0.06
0.03


3463598 2461837












3066770












svm: 3139092
0.76
0.047
0.130
0.043
0.92
0.46
0.21
0.09
0.22
0.06


3463598 2461837












3066770












rpart: 3139092
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3463598 2364325












3005357












svm: 3139092
0.79
0.029
0.056
0.033
0.92
0.46
0.06
0.14
0.17
0.05


3463598 2956442












2651515












svm: 3139092
0.76
0.047
0.174
0.065
0.82
0.36
0.16
0.81
0.29
0.08


2461837 2364325












2651515












svm: 3139092
0.79
0.029
0.008
0.103
0.83
0.32
0.63
0.93
0.50
0.12


2461837 2956442












2651515












knn: 3139092
0.77
0.041
0.292
0.028
0.87
0.50
0.51
0.19
0.11
0.04


2512364 2364325












3005357












svm: 3139092
0.79
0.025
0.012
0.018
1.00
0.50
0.17
0.01
0.04
0.05


2364325 3005357












2651515












rpart: 3139092
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3066770 2956442












3005357












rf: 2789391
0.77
0.041
0.020
0.072
0.91
0.43
0.46
0.29
0.18
0.09


3463598 2512364












3005357












rpart: 2789391
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3463598 3066770












3005357












rf: 2789391
0.79
0.029
0.014
0.036
0.83
0.38
0.50
0.48
0.25
0.06


3463598 3005357












2651515












knn: 2789391
0.79
0.030
0.097
0.026
0.87
0.50
0.41
0.09
0.16
0.04


3463598 3005357












2651515












rf: 2789391
0.81
0.020
0.003
0.012
0.94
0.86
0.26
0.00
0.14
0.03


2512364 3005357












2651515












svm: 2789391
0.77
0.041
0.033
0.023
0.85
0.42
−0.10
0.30
0.18
0.04


2364325 3066770












2651515












rpart: 2789391
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2364325 2956442












3005357












rpart: 2789391
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


2364325 3005357












2651515












svm: 2789391
0.79
0.029
0.005
0.167
0.83
0.32
0.07
0.99
0.65
0.19


2364325 3005357












2651515












rpart: 2789391
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3066770 2956442












3005357












rpart: 2789391
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


3066770 3005357












2651515












rf: 2789391
0.76
0.047
0.014
0.051
0.86
0.33
0.53
0.91
0.32
0.07


2956442 3005357












2651515












rpart: 2789391
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


2956442 3005357












2651515












svm: 3463598
0.82
0.014
0.026
0.049
1.00
0.44
0.41
0.15
0.36
0.07


2461837 2512364












3005357












rpart: 3463598
0.76
0.044
0.126
0.050
0.86
0.45
0.46
0.12
0.08
0.06


2512364 2364325












3005357












rf: 3463598
0.79
0.029
0.008
0.049
0.90
0.40
0.58
0.23
0.25
0.07


2512364 2364325












2651515












rpart: 3463598
0.77
0.042
0.068
0.029
0.87
0.50
0.41
0.05
0.03
0.04


2512364 3066770












3005357












rpart: 3463598
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2512364 2956442












3005357












rf: 3463598
0.83
0.012
0.003
0.016
0.94
0.75
0.41
0.00
0.17
0.03


2512364 3005357












2651515












rpart: 3463598
0.81
0.018
0.007
0.007
0.93
0.55
0.53
0.06
0.05
0.02


2512364 3005357












2651515












rpart: 3463598
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


2364325 2956442












3005357












knn: 3463598
0.78
0.035
0.137
0.028
0.79
0.36
0.50
0.83
0.25
0.04


2364325 2956442












2651515












rf: 3463598
0.78
0.034
0.012
0.054
0.85
0.42
0.44
0.37
0.30
0.07


2364325 3005357












2651515












rpart: 3463598
0.85
0.007
0.025
0.002
0.93
0.60
0.48
0.02
0.04
0.01


2364325 3005357












2651515












rpart: 3463598
0.77
0.011
0.097
0.007
0.88
0.63
0.44
0.02
0.03
0.02


3066770 2956442












3005357












rf: 3463598
0.78
0.034
0.097
0.062
0.85
0.42
0.49
0.34
0.35
0.08


3066770 3005357












2651515












svm: 2461837
0.77
0.041
0.111
0.027
0.80
0.60
−2.92
0.16
0.16
0.04


2512364 3066770












2956442












svm: 2461837
0.76
0.047
0.174
0.052
0.80
0.60
−3.14
0.11
0.13
0.07


2512364 3066770












3005357












svm: 2461837
0.81
0.017
0.043
0.017
0.93
0.55
−0.16
0.02
0.06
0.04


2364325 3066770












2651515












knn: 2461837
0.79
0.021
0.236
0.013
0.87
0.50
0.50
0.11
0.05
0.03


2364325 3005357












2651515












svm: 2461837
0.79
0.025
0.068
0.013
0.85
0.42
0.04
0.08
0.04
0.03


2364325 3005357












2651515












rf: 2512364
0.77
0.041
0.043
0.033
0.92
0.46
0.57
0.13
0.07
0.05


2364325 3066770












3005357












rpart: 2512364
0.77
0.042
0.068
0.029
0.87
0.50
0.41
0.05
0.03
0.04


2364325 3066770












3005357












rf: 2512364
0.76
0.049
0.034
0.070
0.88
0.35
0.62
0.73
0.38
0.09


2364325 3066770












2651515












rf: 2512364
0.83
0.012
0.001
0.007
0.94
0.75
0.36
0.00
0.10
0.02


2364325 3005357












2651515












svm: 2512364
0.79
0.025
0.043
0.023
0.88
0.63
−0.25
0.03
0.13
0.04


2364325 3005357












2651515












rf: 2512364
0.83
0.012
0.003
0.015
0.93
0.60
0.38
0.01
0.13
0.03


2956442 3005357












2651515












knn: 2512364
0.76
0.043
0.357
0.045
0.83
0.32
0.83
0.73
0.20
0.07


2956442 3005357












2651515












rpart: 2512364
0.76
0.045
0.016
0.023
0.91
0.43
0.62
0.29
0.19
0.04


2956442 3005357












2651515












svm: 2512364
0.79
0.025
0.033
0.086
0.92
0.46
0.15
0.06
0.36
0.07


2956442 3005357












2651515












rf: 2364325
0.81
0.021
0.025
0.026
0.88
0.35
0.61
0.73
0.22
0.05


3066770 3005357












2651515












knn: 2364325
0.76
0.043
0.137
0.034
0.86
0.33
0.70
0.66
0.33
0.06


3066770 3005357












2651515












svm: 2364325
0.79
0.029
0.068
0.020
0.83
0.38
0.27
0.71
0.15
0.04


3066770 3005357












2651515












rf: 2364325
0.79
0.027
0.025
0.075
0.88
0.35
0.54
0.73
0.36
0.10


2956442 3005357












2651515












rf: 3066770
0.77
0.043
0.025
0.073
0.86
0.33
0.64
0.91
0.36
0.10


2956442 3005357












2651515









Performance of pairwise, threewise and fourwise combinations of the 15 markers across different metrics for the Recurrence endpoint for LNI positive patients. All classifiers have a Wilcox P-value <=0.05



















TABLE 15







WILCOX
KS
T-TEST



KM P-
UVA HR
UVA OR


CLASSIFIER
AUC
P-VALUE
P-VALUE
P-VALUE
PPV
NPV
CUTOFF
VALUE
P-VALUE
P-VALUE

























rf:3326487
0.70
0.020
0.018
0.013
0.83
0.53
0.55
0.04
0.02
0.02


2458376


nb:3326487
0.72
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3463598


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2461837


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2461837


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2512364


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2512364


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2512364


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2364325


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2364325


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3066770


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3066770


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3066770


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2956442


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2956442


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2956442


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3005357


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3005357


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3005357


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2651515


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2651515


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2651515


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2651515


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2651515


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2461837


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2461837


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2461837


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2461837


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2512364


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2512364


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2512364


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2364325


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2364325


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2364325


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2364325


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3066770


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3066770


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3066770


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3066770


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3066770


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2956442


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2956442


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2956442


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2956442


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3005357


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3005357


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2651515


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2651515


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2651515


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2651515


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2512364


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2364325


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2364325


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2364325


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2364325


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3066770


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3066770


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2956442


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2956442


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2956442


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3005357


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3005357


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3005357


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3005357


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3005357


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2651515


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2651515


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2651515


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2364325


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2364325


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3066770


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3066770


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3066770


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2956442


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2956442


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3005357


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2651515


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2651515


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2651515


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3066770


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2956442


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2956442


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2956442


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2956442


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2651515


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2651515


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2651515


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2651515


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2651515


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2956442


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2956442


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2956442


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2956442


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2651515


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2651515


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3005357


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3005357


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2651515


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2651515


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2651515


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2651515


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2651515


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2651515


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0.67
0.50
0.50
0.35
0.05
0.03


2651515


rpart:3005357
0.66
0.018
0.189
0.015
0.85
0.55
0.56
0.01
0.02
0.03


2651515


svm:3005357
0.71
0.013
0.036
0.026
0.74
0.61
−0.45
0.03
0.06
0.03


2651515









Performance of pairwise, threewise and fourwise combinations of the 15 markers across different metrics for the Recurrence endpoint for the subset of patients that excludes pT2 (organ confined disease) cases. All classifiers have a Wilcox P-value <=0.05


Example 3
A 1,425 Biomarker Library is Prognostic for Muscle Invasive Bladder Cancer Recurrence

In order to define, from the entire set of 1.4 million features available in the array, a comprehensive library of prognostic markers for the recurrence of muscle invasive bladder cancer, features were selected based on the pooled dataset (n=199) presented in Example 1 as follows. Features having an AUC greater or equal than 0.6, a Wilcox p-value less or equal than 0.05 and a MFD greater or equal than 1.25 (or MFD less or equal 0.8) were kept. Features with one or more probes deemed unreliable, unmappable or features having less than 4 probes were removed. After applying these steps, 1,440 markers remained, of which 15 corresponded to the markers already presented in Example 1 (Table 2B). The remaining markers are presented in Table 16. The markers listed in Table 16 were statistically significant for the differential expression between patients with and without bladder cancer recurrence post-cystectomy. Accordingly, Table 16 provides a biomarker library for muscle invasive bladder cancer recurrence. Gene Ontology enrichment assessment of these markers showed that they are highly enriched for multiple biological processes including translation, splicing and cell cycle progression among others processes (Table 17).


Table 18 shows the performance of 1,425 biomarkers of the present invention across various metrics for the recurrence endpoint on the pooled discovery and validation cohort (n=199). Additionally, the good performance of these markers is demonstrated within a clinically relevant set of patients, such as those with negative lymph node involvement (Table 19). Based on the multiple metrics shown in Table 18, these results demonstrate that the library of 1,440 markers of the present invention are useful for prognosing, diagnosing, and predicting the recurrence of muscle invasive bladder cancer.


In addition to the good performance of these markers as univariable predictors, pairwise combinations of the markers (pairwise classifiers) through a machine learning algorithm results in enhanced performance. As shown in Table 20, pairwise classifiers show statistically significant performance when predicting recurrence within the subset of patients with positive lymph node involvement based on Wilcox P-value and a number of other metrics. Each classifier in Table 20 is described by the machine learning algorithm that combines the markers (column ‘classifier’) as well as the probeset ID number of the corresponding markers as provided by Affymetrix (http://www.affymetrix.com/analysis/index.affx; Table 16). These classifiers were trained and tuned in the discover cohort (n=133) and the performance on the positive lymph node involvement patients from the validation set is indicated. When dichotomization is necessary for a performance metric, the classifier scores are dichotomized using unsupervised clustering in the pamr package. The machine learning algorithms used are Naïve Bayes (NB), recursive Partitioning (Rpart), Support Vector Machines (SVMs), Random Forest (RF) and K Nearest Neighbors (KNN). These machine learning algorithms were executed with default parameters using packages rpart 4.1-0, HDclassif 1.2.2, randomForest 4.6-7, caret 5.15-61, cluster 1.14.3, e1071 1.6-1, class 7.3-5 in R. Each classifier generates a score between 0 and 1, except for SVM which generates a score from -09 to +co; in all cases, higher score values indicate higher probability of recurrence.


These results showed that the methods and markers of the present invention are useful for prognosing muscle invasive bladder cancer recurrence. These results further showed that the methods and markers of the present invention are useful for diagnosing, prognosing, determining the progression of cancer, or predicting benefit from therapy in a subject having cancer.
















TABLE 16






AFFYMETRIX









PROBESET


CHRO-


SEQ ID NO
ID
GENES
CATEGORY
MOSOME
START
END
STRAND






















SEQ ID NO. 16
2318654
VAMP3
Non-coding (UTR)
chr1
7841394
7841457
+


SEQ ID NO. 17
2318755
PARK7
Non-coding (UTR)
chr1
8045210
8045305
+


SEQ ID NO. 18
2320062
TARDBP
Coding
chr1
11082181
11082249
+


SEQ ID NO. 19
2321661
TMEM51
Non-coding (UTR)
chr1
15546921
15546958
+


SEQ ID NO. 20
2322383
C1orf144
Non-coding (UTR)
chr1
16722804
16722848
+


SEQ ID NO. 21
2325809
TMEM50A
Non-coding (UTR)
chr1
25687219
25687391
+


SEQ ID NO. 22
2327494
SNHG3
Non-
chr1
28836076
28836118
+





coding (ncTranscript)


SEQ ID NO. 23
2327865
PTPRU
Non-coding (UTR)
chr1
29653253
29653286
+


SEQ ID NO. 24
2328504
KHDRBS1
Non-coding (UTR)
chr1
32509334
32509457
+


SEQ ID NO. 25
2328507
KHDRBS1
Non-
chr1
32510473
32510602
+





coding (Intronic)


SEQ ID NO. 26
2329019
RBBP4
Coding
chr1
33145365
33145408
+


SEQ ID NO. 27
2329798
ZMYM4
Coding
chr1
35858255
35858285
+


SEQ ID NO. 28
2330704
ZC3H12A
Non-coding (UTR)
chr1
37949930
37949963
+


SEQ ID NO. 29
2331419
MACF1
Coding
chr1
39888103
39888203
+


SEQ ID NO. 30
2331842
ZMPSTE24
Non-coding (UTR)
chr1
40759698
40759778
+


SEQ ID NO. 31
2332192
CTPS
Non-coding (UTR)
chr1
41478182
41478210
+


SEQ ID NO. 32
2332740
PPIH
Non-coding (UTR)
chr1
43142355
43142406
+


SEQ ID NO. 33
2334302
UROD
Non-coding (UTR)
chr1
45481172
45481224
+


SEQ ID NO. 34
2336960
TMEM59
Non-coding (Exonic
chr1
54497388
54497746
+





Antisense)


SEQ ID NO. 35
2339310
INADL
Non-coding (UTR)
chr1
62628807
62628976
+


SEQ ID NO. 36
2342617
ACADM
Non-coding (UTR)
chr1
76229076
76229135
+


SEQ ID NO. 37
2345634
PKN2
Coding
chr1
89206755
89206948
+


SEQ ID NO. 38
2345663
PKN2
Non-
chr1
89262619
89262697
+





coding (Intronic)


SEQ ID NO. 39
2345666
PKN2
Coding
chr1
89270538
89270576
+


SEQ ID NO. 40
2346911
RPL5
Coding
chr1
93307350
93307383
+


SEQ ID NO. 41
2346912
RPL5
Non-coding (UTR)
chr1
93307433
93307475
+


SEQ ID NO. 42
2347108
DR1
Non-coding (UTR)
chr1
93826315
93826475
+


SEQ ID NO. 43
2348819
CCDC76
Non-coding (UTR)
chr1
100615958
100616029
+


SEQ ID NO. 44
2350305
PRPF38B
Coding
chr1
109242408
109242557
+


SEQ ID NO. 45
2350371
STXBP3
Coding
chr1
109325090
109325138
+


SEQ ID NO. 46
2352268
CAPZA1
Non-coding (UTR)
chr1
113212895
113214104
+


SEQ ID NO. 47
2353492
ATP1A1
Coding
chr1
116926636
116926663
+


SEQ ID NO. 48
2358275
RPRD2
Coding
chr1
150432735
150432779
+


SEQ ID NO. 49
2358923
PSMB4
Non-coding (UTR)
chr1
151374317
151374387
+


SEQ ID NO. 50
2359857
INTS3
Coding
chr1
153735226
153735307
+


SEQ ID NO. 51
2360078
C1orf43
Non-coding (Exonic
chr1
154179232
154179785
+





Antisense)


SEQ ID NO. 52
2360119
UBAP2L
Coding
chr1
154227635
154227752
+


SEQ ID NO. 53
2360120
UBAP2L
Coding
chr1
154227763
154227790
+


SEQ ID NO. 54
2360340
UBE2Q1
Non-coding (Exonic
chr1
154522576
154522811
+





Antisense)


SEQ ID NO. 55
2360716
SLC50A1
Non-coding (UTR)
chr1
155111252
155111301
+


SEQ ID NO. 56
2360962
ASH1L
Non-coding (Exonic
chr1
155490977
155491324
+





Antisense)


SEQ ID NO. 57
2361031
MSTO1
Non-coding (UTR)
chr1
155584682
155584715
+


SEQ ID NO. 58
2363064
DCAF8
Non-coding (Exonic
chr1
160186563
160186594
+





Antisense)


SEQ ID NO. 59
2363334
F11R
Non-coding (Exonic
chr1
160966066
160966286
+





Antisense)


SEQ ID NO. 60
2363956
ATF6
Coding
chr1
161823014
161823046
+


SEQ ID NO. 61
2365991
MPZL1
Coding
chr1
167757129
167757158
+


SEQ ID NO. 62
2367178
PRRC2C
Coding
chr1
171492580
171492650
+


SEQ ID NO. 63
2367214
PRRC2C
Coding
chr1
171548499
171548532
+


SEQ ID NO. 64
2367236
PRRC2C
Non-
chr1
171457106
171457157
+





coding (Intronic)


SEQ ID NO. 65
2369830
chr1+: 179888850-179889162
Non-
chr1
179888850
179889162
+





coding (Intergenic)


SEQ ID NO. 66
2370014
QSOX1
Non-coding (UTR)
chr1
180167171
180167222
+


SEQ ID NO. 67
2371291
SMG7
Coding
chr1
183511357
183511473
+


SEQ ID NO. 68
2371339
ARPC5
Non-coding (Exonic
chr1
183595532
183595591
+





Antisense)


SEQ ID NO. 69
2371796
IVNS1ABP
Non-coding (Exonic
chr1
185280292
185280436
+





Antisense)


SEQ ID NO. 70
2373002
CDC73
Coding
chr1
193181573
193181606
+


SEQ ID NO. 71
2375035
ELF3
Non-coding (UTR)
chr1
201985159
201985198
+


SEQ ID NO. 72
2375037
ELF3
Non-coding (UTR)
chr1
201986251
201986287
+


SEQ ID NO. 73
2375675
BTG2
Non-coding (UTR)
chr1
203278631
203278704
+


SEQ ID NO. 74
2375780
ATP2B4
Non-coding (UTR)
chr1
203713164
203713195
+


SEQ ID NO. 75
2375850
ZC3H11A
Coding
chr1
203816372
203816525
+


SEQ ID NO. 76
2375890
SNRPE
Non-coding (UTR)
chr1
203839160
203839185
+


SEQ ID NO. 77
2377473
CD46
Non-
chr1
207940689
207940924
+





coding (ncTranscript)


SEQ ID NO. 78
2377508
CD46
Non-coding (UTR)
chr1
207968669
207968799
+


SEQ ID NO. 79
2378615
RCOR3
Coding
chr1
211469018
211469048
+


SEQ ID NO. 80
2379787
SMYD2
Coding
chr1
214498021
214498050
+


SEQ ID NO. 81
2383763
ARF1
Non-coding (UTR)
chr1
228285909
228286156
+


SEQ ID NO. 82
2389076
FAM36A
Non-
chr1
245005918
245006248
+





coding (Intronic)


SEQ ID NO. 83
2389079
FAM36A
Non-coding (UTR)
chr1
245006641
245006814
+


SEQ ID NO. 84
2389084
NCRNA00201
Non-coding (Intronic
chr1
245010244
245010313
+





Antisense)


SEQ ID NO. 85
2389086
NCRNA00201
Non-coding (Intronic
chr1
245010957
245011086
+





Antisense)


SEQ ID NO. 86
2389817
SCCPDH
Non-coding (UTR)
chr1
246930619
246930723
+


SEQ ID NO. 87
2394560
RPL22
Non-coding (UTR)
chr1
6245095
6245147



SEQ ID NO. 88
2395192
ERRF11
Non-
chr1
8077370
8078230






coding (Intronic)


SEQ ID NO. 89
2395195
ERRF11
Non-
chr1
8081604
8082267






coding (Intronic)


SEQ ID NO. 90
2396421
MASP2
Coding
chr1
11086948
11086983



SEQ ID NO. 91
2400180
CAMK2N1
Non-coding (UTR)
chr1
20810077
20810117



SEQ ID NO. 92
2400323
HP1BP3
Non-coding (UTR)
chr1
21069239
21069434



SEQ ID NO. 93
2401277
chr1−: 23614583-23614893
Non-
chr1
23614583
23614893






coding (Intergenic)


SEQ ID NO. 94
2401288
HNRNPR
Non-coding (UTR)
chr1
23636701
23636918



SEQ ID NO. 95
2401350
TCEA3
Non-coding (UTR)
chr1
23707883
23707923



SEQ ID NO. 96
2401368
TCEA3
Coding
chr1
23735157
23735185



SEQ ID NO. 97
2402210
TMEM50A
Non-coding (Exonic
chr1
25687170
25687537






Antisense)


SEQ ID NO. 98
2405379
AK2
Coding
chr1
33478681
33478714



SEQ ID NO. 99
2406094
SFPQ
Coding
chr1
35654644
35654687



SEQ ID NO. 100
2406148
KIAA0319L
Non-coding (UTR)
chr1
35899093
35899130



SEQ ID NO. 101
2407134
MEAF6
Non-coding (UTR)
chr1
37958790
37958867



SEQ ID NO. 102
2408880
FOXJ3
Coding
chr1
42660561
42660688



SEQ ID NO. 103
2410112
MUTYH
Non-coding (UTR)
chr1
45794927
45794963



SEQ ID NO. 104
2410528
POMGNT1
Coding
chr1
46654372
46654408



SEQ ID NO. 105
2412669
TXNDC12
Non-coding (UTR)
chr1
52485854
52485894



SEQ ID NO. 106
2413580
TMEM59
Non-coding (UTR)
chr1
54497716
54497788



SEQ ID NO. 107
2414030
USP24
Coding
chr1
55608416
55608446



SEQ ID NO. 108
2414960
TACSTD2
Non-coding (UTR)
chr1
59041241
59041545



SEQ ID NO. 109
2417788
SRSF11
Non-coding (Exonic
chr1
70717148
70717519






Antisense)


SEQ ID NO. 110
2418028
ZRANB2
Coding
chr1
71542488
71542559



SEQ ID NO. 111
2419242
FUBP1
Non-
chr1
78412683
78413071






coding (ncTranscript)


SEQ ID NO. 112
2419247
FUBP1
Non-
chr1
78413793
78413946






coding (ncTranscript)


SEQ ID NO. 113
2419276
FUBP1
Coding
chr1
78429939
78430038



SEQ ID NO. 114
2420740
SYDE2
Non-coding (UTR)
chr1
85624387
85624416



SEQ ID NO. 115
2420839
DDAH1
Non-coding (UTR)
chr1
85784191
85784259



SEQ ID NO. 116
2421273
RP4-604K5.1
Non-coding (UTR)
chr1
87328509
87329064



SEQ ID NO. 117
2421274
RP4-604K5.1
Coding
chr1
87329188
87329229



SEQ ID NO. 118
2421932
GBP2
Non-coding (UTR)
chr1
89573754
89573847



SEQ ID NO. 119
2422519
ZNF644
Non-coding (UTR)
chr1
91381226
91381289



SEQ ID NO. 120
2423200
RPL5
Non-coding (Exonic
chr1
93303053
93303092






Antisense)


SEQ ID NO. 121
2427009
SORT1
Non-coding (UTR)
chr1
109852227
109852265



SEQ ID NO. 122
2427501
HBXIP
Non-coding (UTR)
chr1
110943961
110944044



SEQ ID NO. 123
2427978
ATP5F1
Non-coding (Exonic
chr1
112003809
112003849






Antisense)


SEQ ID NO. 124
2428394
CAPZA1
Non-coding (Exonic
chr1
113213521
113214105






Antisense)


SEQ ID NO. 125
2429071
TRIM33
Non-coding (UTR)
chr1
114938592
114939061



SEQ ID NO. 126
2429119
TRIM33
Non-
chr1
114969301
114969662






coding (Intronic)


SEQ ID NO. 127
2429168
BCAS2
Coding
chr1
115110821
115110850



SEQ ID NO. 128
2429282
CSDE1
Non-coding (UTR)
chr1
115260444
115260566



SEQ ID NO. 129
2429309
CSDE1
Coding
chr1
115275269
115275381



SEQ ID NO. 130
2429310
CSDE1
Coding
chr1
115276377
115276466



SEQ ID NO. 131
2433376
ACP6
Non-coding (UTR)
chr1
147119193
147119224



SEQ ID NO. 132
2434721
LASS2
Non-coding (UTR)
chr1
150937780
150937854



SEQ ID NO. 133
2435391
S100A10
Non-coding (UTR)
chr1
151955516
151955638



SEQ ID NO. 134
2437095
KRTCAP2
Non-coding (UTR)
chr1
155141888
155141915



SEQ ID NO. 135
2437537
RP11-29H23.5
Non-
chr1
155584631
155584658






coding (ncTranscript)


SEQ ID NO. 136
2437538
RP11-29H23.5
Non-
chr1
155584675
155584710






coding (Intronic)


SEQ ID NO. 137
2437680
GON4L
Coding
chr1
155740950
155740999



SEQ ID NO. 138
2437775
KIAA0907
Coding
chr1
155891652
155891707



SEQ ID NO. 139
2439041
RP11-367J7.4
Non-coding (Exonic
chr1
157678937
157679031






Antisense)


SEQ ID NO. 140
2440149
COPA
Coding
chr1
160259963
160259992



SEQ ID NO. 141
2440513
TSTD1
Non-coding (UTR)
chr1
161007434
161007466



SEQ ID NO. 142
2442702
CREG1
Non-coding (UTR)
chr1
167510554
167511025



SEQ ID NO. 143
2443917
PRRC2C
Non-coding (Exonic
chr1
171492584
171492848






Antisense)


SEQ ID NO. 144
2444488
GAS5
Non-
chr1
173833813
173833842






coding (ncTranscript)


SEQ ID NO. 145
2444489
GAS5, SNORD80
Non-
chr1
173833844
173833968






coding (ncTranscript)


SEQ ID NO. 146
2448289
TPR
Coding
chr1
186316431
186316560



SEQ ID NO. 147
2448313
TPR
Coding
chr1
186340102
186340137



SEQ ID NO. 148
2450669
TMEM9
Non-coding (UTR)
chr1
201103905
201103934



SEQ ID NO. 149
2451314
KDM5B
Non-coding (UTR)
chr1
202697851
202698124



SEQ ID NO. 150
2452652
NUCKS1
Coding
chr1
205693063
205693090



SEQ ID NO. 151
2452655
NUCKS1
Coding
chr1
205698706
205698745



SEQ ID NO. 152
2457626
BROX
Non-coding (Exonic
chr1
222906823
222906871






Antisense)


SEQ ID NO. 153
2458075
PARP1
Non-
chr1
224563524
224563621






coding (Intronic)


SEQ ID NO. 154
2458381
ENAH
Coding
chr1
225700375
225700414



SEQ ID NO. 155
2458503
PARP1
Non-
chr1
225977149
225977173






coding (Intronic)


SEQ ID NO. 156
2459655
RHOU
Non-coding (Exonic
chr1
228882329
228882370






Antisense)


SEQ ID NO. 157
2461827
ARID4B
Coding
chr1
235383150
235383265



SEQ ID NO. 158
2461828
ARID4B
Coding
chr1
235383674
235383841



SEQ ID NO. 159
2462178
NID1
Non-coding (UTR)
chr1
236139156
236139261



SEQ ID NO. 160
2464496
NCRNA00201
Non-
chr1
245010247
245010645






coding (Intronic)


SEQ ID NO. 161
2464505
HNRNPU
Non-coding (UTR)
chr1
245016420
245016449



SEQ ID NO. 162
2464514
HNRNPU, NCRNA00201
Coding
chr1
245017752
245017789



SEQ ID NO. 163
2464537
HNRNPU
Coding
chr1
245022587
245022672



SEQ ID NO. 164
2468935
CPSF3
Coding
chr2
9580633
9580745
+


SEQ ID NO. 165
2469568
ATP6V1C2
Non-coding (UTR)
chr2
10923651
10923817
+


SEQ ID NO. 166
2473241
NCOA1
Coding
chr2
24962301
24962395
+


SEQ ID NO. 167
2473624
RAB10
Non-coding (UTR)
chr2
26358253
26358315
+


SEQ ID NO. 168
2474147
TMEM214
Non-coding (UTR)
chr2
27264519
27264553
+


SEQ ID NO. 169
2474700
GPN1
Coding
chr2
27873018
27873055
+


SEQ ID NO. 170
2474770
MRPL33
Non-coding (UTR)
chr2
28002513
28002557
+


SEQ ID NO. 171
2475647
YPEL5
Non-coding (UTR)
chr2
30383149
30383365
+


SEQ ID NO. 172
2476316
BIRC6
Coding
chr2
32707551
32707640
+


SEQ ID NO. 173
2476408
BIRC6
Non-coding (UTR)
chr2
32843548
32843578
+


SEQ ID NO. 174
2477341
AC007390.5
Coding
chr2
37428785
37428822
+


SEQ ID NO. 175
2478839
EML4
Non-coding (UTR)
chr2
42559443
42559634
+


SEQ ID NO. 176
2479729
SLC3A1
Non-
chr2
44546007
44546621
+





coding (Intronic)


SEQ ID NO. 177
2480989
EPCAM
Non-coding (UTR)
chr2
47614066
47614142
+


SEQ ID NO. 178
2481178
MSH6
Non-coding (UTR)
chr2
48034001
48034074
+


SEQ ID NO. 179
2482593
SPTBN1
Coding
chr2
54882207
54882334
+


SEQ ID NO. 180
2482624
SPTBN1
Non-coding (UTR)
chr2
54896727
54896801
+


SEQ ID NO. 181
2483047
CCDC104
Non-coding (UTR)
chr2
55772160
55772187
+


SEQ ID NO. 182
2484558
AHSA2
Non-coding (UTR)
chr2
61405713
61405771
+


SEQ ID NO. 183
2484807
COMMD1
Non-coding (UTR)
chr2
62363157
62363187
+


SEQ ID NO. 184
2485214
MDH1
Non-coding (UTR)
chr2
63834172
63834310
+


SEQ ID NO. 185
2485276
UGP2
Coding
chr2
64111133
64111216
+


SEQ ID NO. 186
2487216
ANTXR1
Non-coding (UTR)
chr2
69475036
69475067
+


SEQ ID NO. 187
2487645
PCBP1
Non-coding (UTR)
chr2
70315979
70316219
+


SEQ ID NO. 188
2488150
ZNF638
Coding
chr2
71591148
71591240
+


SEQ ID NO. 189
2489030
ACTG2
Non-coding (UTR)
chr2
74146720
74146765
+


SEQ ID NO. 190
2489435
HTRA2
Non-coding (UTR)
chr2
74760238
74760277
+


SEQ ID NO. 191
2491645
MAT2A
Non-coding (UTR)
chr2
85771254
85771283
+


SEQ ID NO. 192
2492101
KDM3A
Coding
chr2
86705731
86705762
+


SEQ ID NO. 193
2492833
THNSL2
Non-coding (UTR)
chr2
88486099
88486137
+


SEQ ID NO. 194
2495140
ACTR1B
Non-coding (Exonic
chr2
98272473
98272513
+





Antisense)


SEQ ID NO. 195
2498988
GCC2
Coding
chr2
109067518
109067567
+


SEQ ID NO. 196
2507241
CCNT2
Non-
chr2
135704085
135704123
+





coding (Intronic)


SEQ ID NO. 197
2507514
UBXN4
Coding
chr2
136519410
136519481
+


SEQ ID NO. 198
2507533
UBXN4
Non-coding (UTR)
chr2
136540632
136540870
+


SEQ ID NO. 199
2512351
MARCH7
Coding
chr2
160604317
160604346
+


SEQ ID NO. 200
2512363
MARCH7
Non-
chr2
160621087
160621136
+





coding (Intronic)


SEQ ID NO. 201
2512959
GCA
Non-coding (UTR)
chr2
163217462
163217604
+


SEQ ID NO. 202
2515085
GORASP2
Coding
chr2
171818173
171818259
+


SEQ ID NO. 203
2517330
HNRNPA3
Non-coding (UTR)
chr2
178085947
178085971
+


SEQ ID NO. 204
2518193
UBE2E3
Non-
chr2
181920652
181920789
+





coding (Intronic)


SEQ ID NO. 205
2518707
NCKAP1
Non-coding (Exonic
chr2
183789642
183790486
+





Antisense)


SEQ ID NO. 206
2525095
CREB1
Non-coding (UTR)
chr2
208462572
208462631
+


SEQ ID NO. 207
2527206
RPL37A
Coding
chr2
217366083
217366127
+


SEQ ID NO. 208
2527635
ARPC2
Non-
chr2
219108586
219108713
+





coding (Intronic)


SEQ ID NO. 209
2532844
ATG16L1
Non-coding (UTR)
chr2
234204250
234204278
+


SEQ ID NO. 210
2534447
LRRFIP1
Coding
chr2
238671957
238672019
+


SEQ ID NO. 211
2537112
SH3YL1
Non-coding (UTR)
chr2
218176
218541



SEQ ID NO. 212
2539775
ITGB1BP1
Non-coding (UTR)
chr2
9546826
9546962



SEQ ID NO. 213
2540221
NOL10
Non-coding (UTR)
chr2
10711789
10711820



SEQ ID NO. 214
2544180
AC008073.5
Non-coding (UTR)
chr2
24290483
24290599



SEQ ID NO. 215
2544185
AC008073.5
Coding
chr2
24296946
24296980



SEQ ID NO. 216
2544295
ITSN2
Coding
chr2
24498610
24498679



SEQ ID NO. 217
2544306
ITSN2
Coding
chr2
24516558
24516637



SEQ ID NO. 218
2546279
SPDYA, PPP1CB
Non-coding (Exonic
chr2
29025630
29025776






Antisense)


SEQ ID NO. 219
2549323
MAP4K3
Coding
chr2
39552666
39552755



SEQ ID NO. 220
2550840
LRPPRC
Coding
chr2
44170831
44170960



SEQ ID NO. 221
2550842
LRPPRC
Coding
chr2
44173258
44173355



SEQ ID NO. 222
2550964
PREPL
Non-coding (UTR)
chr2
44546148
44546608



SEQ ID NO. 223
2552021
EPCAM
Non-coding (Exonic
chr2
47613985
47614122






Antisense)


SEQ ID NO. 224
2553312
PSME4
Coding
chr2
54127114
54127147



SEQ ID NO. 225
2553583
RTN4
Non-coding (UTR)
chr2
55199333
55199382



SEQ ID NO. 226
2553585
RTN4
Non-coding (UTR)
chr2
55199483
55199611



SEQ ID NO. 227
2553595
RTN4
Coding
chr2
55200957
55200996



SEQ ID NO. 228
2553907
CCDC104
Non-coding (Exonic
chr2
55771450
55771480






Antisense)


SEQ ID NO. 229
2554001
PNPT1
Coding
chr2
55899130
55899157



SEQ ID NO. 230
2555279
USP34
Non-coding (UTR)
chr2
61414634
61414669



SEQ ID NO. 231
2555281
USP34
Coding
chr2
61415253
61415312



SEQ ID NO. 232
2555288
USP34
Coding
chr2
61417424
61417531



SEQ ID NO. 233
2555330
USP34
Non-
chr2
61452805
61453037






coding (Intronic)


SEQ ID NO. 234
2555409
USP34
Coding
chr2
61575369
61575420



SEQ ID NO. 235
2555411
USP34
Coding
chr2
61575891
61575998



SEQ ID NO. 236
2555416
USP34
Coding
chr2
61597633
61597690



SEQ ID NO. 237
2555507
XPO1
Coding
chr2
61712955
61713067



SEQ ID NO. 238
2555522
XPO1
Coding
chr2
61725848
61725908



SEQ ID NO. 239
2556229
VPS54
Coding
chr2
64126624
64126660



SEQ ID NO. 240
2558208
AAK1
Coding
chr2
69754363
69754404



SEQ ID NO. 241
2558313
ANXA4
Non-coding (Exonic
chr2
70053082
70053422






Antisense)


SEQ ID NO. 242
2558519
TIA1
Non-coding (UTR)
chr2
70439751
70439835



SEQ ID NO. 243
2559293
EXOC6B
Coding
chr2
72707745
72707845



SEQ ID NO. 244
2562334
MAT2A
Non-coding (Exonic
chr2
85771249
85771273






Antisense)


SEQ ID NO. 245
2565264
SNRNP200
Non-coding (UTR)
chr2
96940504
96940591



SEQ ID NO. 246
2575142
POLR2D
Non-coding (UTR)
chr2
128604260
128604288



SEQ ID NO. 247
2577959
DARS
Non-coding (UTR)
chr2
136664325
136664784



SEQ ID NO. 248
2581588
PRPF40A
Coding
chr2
153535585
153535623



SEQ ID NO. 249
2583054
BAZ2B
Coding
chr2
160255340
160255388



SEQ ID NO. 250
2583056
BAZ2B
Coding
chr2
160257114
160257145



SEQ ID NO. 251
2583249
MARCH7
Non-coding (Exonic
chr2
160624839
160625024






Antisense)


SEQ ID NO. 252
2583609
RBMS1
Non-coding (UTR)
chr2
161129828
161129873



SEQ ID NO. 253
2584845
COBLL1
Coding
chr2
165578935
165578973



SEQ ID NO. 254
2588838
NFE2L2
Coding
chr2
178096686
178096714



SEQ ID NO. 255
2590750
NCKAP1
Non-coding (UTR)
chr2
183789825
183790389



SEQ ID NO. 256
2590802
NCKAP1
Coding
chr2
183867709
183867744



SEQ ID NO. 257
2591635
COL3A1
Non-coding (Exonic
chr2
189873799
189873913






Antisense)


SEQ ID NO. 258
2591638
COL3A1
Non-coding (Exonic
chr2
189876571
189877301






Antisense)


SEQ ID NO. 259
2593447
PGAP1
Coding
chr2
197767344
197767458



SEQ ID NO. 260
2593692
SF3B1
Coding
chr2
198265439
198265473



SEQ ID NO. 261
2593714
SF3B1
Coding
chr2
198283234
198283287



SEQ ID NO. 262
2593758
HSPD1
Coding
chr2
198359404
198359433



SEQ ID NO. 263
2594506
CLK1
Coding
chr2
201719352
201719417



SEQ ID NO. 264
2596691
FAM119A
Non-coding (UTR)
chr2
208446110
208446140



SEQ ID NO. 265
2597013
IDH1
Non-coding (UTR)
chr2
209101126
209101382



SEQ ID NO. 266
2598267
FN1
Non-coding (UTR)
chr2
216226027
216226061



SEQ ID NO. 267
2598289
FN1
Coding
chr2
216237027
216237060



SEQ ID NO. 268
2598781
RPL37A, AC073321.5
Non-coding (Exonic
chr2
217366067
217366101






Antisense)


SEQ ID NO. 269
2599342
ARPC2
Non-coding (Exonic
chr2
219118929
219119040






Antisense)


SEQ ID NO. 270
2599903
C2orf24
Non-coding (UTR)
chr2
220036632
220036691



SEQ ID NO. 271
2606647
MYEOV2
Non-coding (UTR)
chr2
241070273
241070379



SEQ ID NO. 272
2607152
HDLBP
Coding
chr2
242186485
242186548



SEQ ID NO. 273
2607374
DTYMK
Non-coding (UTR)
chr2
242615202
242615297



SEQ ID NO. 274
2609635
SETD5
Non-
chr3
9473392
9473435
+





coding (ncTranscript)


SEQ ID NO. 275
2609657
SETD5
Coding
chr3
9482211
9482361
+


SEQ ID NO. 276
2609668
SETD5
Coding
chr3
9486849
9486982
+


SEQ ID NO. 277
2610353
chr3+: 10195215-10195245
Non-
chr3
10195215
10195245
+





coding (Intergenic)


SEQ ID NO. 278
2611083
PPARG
Non-
chr3
12400965
12401103
+





coding (Intronic)


SEQ ID NO. 279
2614100
UBE2E1
Coding
chr3
23929058
23929154
+


SEQ ID NO. 280
2614135
RPL15
Non-coding (UTR)
chr3
23961672
23961706
+


SEQ ID NO. 281
2614137
RPL15
Non-coding (UTR)
chr3
23962179
23962307
+


SEQ ID NO. 282
2615656
STT3B
Non-coding (UTR)
chr3
31678984
31679087
+


SEQ ID NO. 283
2616071
CNOT10
Non-coding (UTR)
chr3
32815151
32815180
+


SEQ ID NO. 284
2616248
FBXL2
Non-
chr3
33429931
33430929
+





coding (Intronic)


SEQ ID NO. 285
2617578
MYD88
Non-coding (UTR)
chr3
38184424
38184480
+


SEQ ID NO. 286
2618656
RPL14
Non-coding (UTR)
chr3
40503816
40503845
+


SEQ ID NO. 287
2619365
NKTR
Non-
chr3
42666725
42666819
+





coding (Intronic)


SEQ ID NO. 288
2625632
APPL1
Coding
chr3
57290985
57291016
+


SEQ ID NO. 289
2625643
APPL1
Coding
chr3
57301770
57301820
+


SEQ ID NO. 290
2625893
SLMAP
Non-coding (UTR)
chr3
57914855
57914884
+


SEQ ID NO. 291
2627951
RP11-714G12.1
Non-
chr3
65673641
65673667
+





coding (ncTranscript)


SEQ ID NO. 292
2633534
C3orf26
Non-coding (UTR)
chr3
99897391
99897425
+


SEQ ID NO. 293
2633651
NIT2
Non-coding (UTR)
chr3
100074128
100074184
+


SEQ ID NO. 294
2638377
LRRC58
Non-coding (Exonic
chr3
120048985
120049161
+





Antisense)


SEQ ID NO. 295
2638451
NDUFB4
Coding
chr3
120321084
120321117
+


SEQ ID NO. 296
2638452
NDUFB4
Non-coding (UTR)
chr3
120321127
120321167
+


SEQ ID NO. 297
2641575
COPG
Non-coding (UTR)
chr3
128996540
128996609
+


SEQ ID NO. 298
2643579
CEP63
Non-coding (UTR)
chr3
134280433
134280587
+


SEQ ID NO. 299
2645294
SLC25A36
Non-coding (UTR)
chr3
140685221
140685276
+


SEQ ID NO. 300
2646066
U2SURP
Coding
chr3
142741771
142741883
+


SEQ ID NO. 301
2646085
U2SURP
Coding
chr3
142757736
142757777
+


SEQ ID NO. 302
2647361
WWTR1
Non-coding (Exonic
chr3
149235100
149235425
+





Antisense)


SEQ ID NO. 303
2647678
TSC22D2
Non-
chr3
150143909
150143956
+





coding (Intronic)


SEQ ID NO. 304
2647775
EIF2A
Coding
chr3
150293465
150293498
+


SEQ ID NO. 305
2647779
EIF2A
Coding
chr3
15030098
150301017
+


SEQ ID NO. 306
2648202
MBNL1
Coding
chr3
152177060
152177091
+


SEQ ID NO. 307
2651521
MECOM
Non-coding (Intronic
chr3
169048129
169048401
+





Antisense)


SEQ ID NO. 308
2652021
chr3+: 170114495-170114579
Non-
chr3
170114495
170114579
+





coding (Intergenic)


SEQ ID NO. 309
2654335
TTC14
Coding
chr3
180328005
180328126
+


SEQ ID NO. 310
2654874
ATP11B
Coding
chr3
182605374
182605485
+


SEQ ID NO. 311
2654878
ATP11B
Coding
chr3
182614525
182614552
+


SEQ ID NO. 312
2655475
DVL3
Non-coding (UTR)
chr3
183891141
183891343
+


SEQ ID NO. 313
2655509
AP2M1
Non-coding (UTR)
chr3
183901799
183901823
+


SEQ ID NO. 314
2655678
PSMD2
Coding
chr3
184024162
184024203
+


SEQ ID NO. 315
2656791
EIF4A2
Non-coding (UTR)
chr3
186507573
186507657
+


SEQ ID NO. 316
2658354
OPA1
Coding
chr3
193332585
193332691
+


SEQ ID NO. 317
2658632
HES1
Non-coding (UTR)
chr3
193856166
193856286
+


SEQ ID NO. 318
2663553
NUP210
Non-coding (UTR)
chr3
13357767
13357827



SEQ ID NO. 319
2666503
TOP2B
Coding
chr3
25659949
25659979



SEQ ID NO. 320
2666519
TOP2B
Coding
chr3
25668695
25668787



SEQ ID NO. 321
2666524
TOP2B
Coding
chr3
25671534
25671588



SEQ ID NO. 322
2669316
GOLGA4
Non-coding (Exonic
chr3
37365990
37366061






Antisense)


SEQ ID NO. 323
2669571
MYD88
Non-coding (Exonic
chr3
38184382
38184448






Antisense)


SEQ ID NO. 324
2670438
chr3−: 41197321-41197352
Non-
chr3
41197321
41197352






coding (Intergenic)


SEQ ID NO. 325
2672775
C3orf75
Non-coding (UTR)
chr3
47537138
47537165



SEQ ID NO. 326
2674243
RHOA
Non-coding (UTR)
chr3
49396583
49396613



SEQ ID NO. 327
2675269
NPRL2
Non-coding (UTR)
chr3
50384946
50384986



SEQ ID NO. 328
2675802
PCBP4
Non-coding (UTR)
chr3
51991509
51991574



SEQ ID NO. 329
2676931
RP11-884K10.5
Non-coding (UTR)
chr3
53919264
53919310



SEQ ID NO. 330
2677655
C3orf63
Non-coding (UTR)
chr3
56656912
56656956



SEQ ID NO. 331
2677695
C3orf63
Non-
chr3
56702382
56702424






coding (Intronic)


SEQ ID NO. 332
2680511
MAGI1, RP11-
Non-
chr3
65887126
65887154





175F9.3
coding (Intronic)


SEQ ID NO. 333
2682663
PPP4R2
Non-coding (Exonic
chr3
73116009
73116260






Antisense)


SEQ ID NO. 334
2685954
CPOX
Non-coding (UTR)
chr3
98298317
98298425



SEQ ID NO. 335
2691756
GOLGB1
Coding
chr3
121417416
121417547



SEQ ID NO. 336
2692111
DTX3L
Non-coding (Exonic
chr3
122293046
122293265






Antisense)


SEQ ID NO. 337
2694407
RPN1
Coding
chr3
128345595
128345630



SEQ ID NO. 338
2694648
CNBP
Non-coding (UTR)
chr3
128888336
128888400



SEQ ID NO. 339
2694649
CNBP
Non-coding (UTR)
chr3
128888471
128888731



SEQ ID NO. 340
2695413
MRPL3
Non-coding (UTR)
chr3
131181258
131181354



SEQ ID NO. 341
2700507
COMMD2
Coding
chr3
149468465
149468497



SEQ ID NO. 342
2700829
SIAH2
Non-coding (UTR)
chr3
150458934
150458997



SEQ ID NO. 343
2701289
MBNL1
Non-coding (Intronic
chr3
152046480
152046743






Antisense)


SEQ ID NO. 344
2702329
CCNL1
Non-coding (UTR)
chr3
156865649
156865775



SEQ ID NO. 345
2703240
KPNA4
Coding
chr3
160225956
160225986



SEQ ID NO. 346
2704511
MECOM
Non-
chr3
169031880
169032002






coding (Intronic)


SEQ ID NO. 347
2704898
PHC3
Non-
chr3
169808000
169808215






coding (Intronic)


SEQ ID NO. 348
2704935
PHC3
Coding
chr3
169889168
169889237



SEQ ID NO. 349
2705001
chr3−: 170112099-170112278
Non-
chr3
170112099
170112278






coding (Intergenic)


SEQ ID NO. 350
2706322
TBL1XR1
Non-coding (UTR)
chr3
176739787
176740276



SEQ ID NO. 351
2706324
TBL1XR1
Non-coding (UTR)
chr3
176741134
176741226



SEQ ID NO. 352
2707780
DCUN1D1
Coding
chr3
182665046
182665074



SEQ ID NO. 353
2708798
RP11-110C15.4
Non-
chr3
185135627
185135657






coding (ncTranscript)


SEQ ID NO. 354
2709489
RFC4
Coding
chr3
186507758
186507817



SEQ ID NO. 355
2710214
LPP
Non-coding (Exonic
chr3
188595052
188595263






Antisense)


SEQ ID NO. 356
2710217
LPP
Non-coding (Exonic
chr3
188596212
188596304






Antisense)


SEQ ID NO. 357
2711689
ATP13A3
Coding
chr3
194169199
194169357



SEQ ID NO. 358
2712424
TNK2
Non-coding (UTR)
chr3
195590243
195590284



SEQ ID NO. 359
2713075
NCBP2
Non-coding (UTR)
chr3
196662298
196662359



SEQ ID NO. 360
2713262
DLG1
Coding
chr3
196865154
196865258



SEQ ID NO. 361
2713269
DLG1
Coding
chr3
196876625
196876656



SEQ ID NO. 362
2714106
PIGG
Non-coding (UTR)
chr4
533179
533289
+


SEQ ID NO. 363
2715470
RNF4
Non-coding (UTR)
chr4
2517539
2517569
+


SEQ ID NO. 364
2715717
ADD1
Non-coding (UTR)
chr4
2931743
2931773
+


SEQ ID NO. 365
2720693
SLIT2
Non-coding (UTR)
chr4
20622128
20622155
+


SEQ ID NO. 366
2724050
KLF3
Non-coding (UTR)
chr4
38700710
38702100
+


SEQ ID NO. 367
2724565
PABPC1P1
Non-
chr4
39975424
39975454
+





coding (ncTranscript)


SEQ ID NO. 368
2726514
OCIAD1
Coding
chr4
48859230
48859373
+


SEQ ID NO. 369
2727970
EXOC1
Non-coding (UTR)
chr4
56771127
56771164
+


SEQ ID NO. 370
2730701
MOBKL1A
Coding
chr4
71844873
71844981
+


SEQ ID NO. 371
2731872
USO1
Coding
chr4
76722241
76722353
+


SEQ ID NO. 372
2732403
CCNG2
Coding
chr4
78081887
78082066
+


SEQ ID NO. 373
2735017
SPARCL1
Non-coding (Exonic
chr4
88394536
88394668
+





Antisense)


SEQ ID NO. 374
2736295
SMARCAD1
Coding
chr4
95198175
95198297
+


SEQ ID NO. 375
2738963
OSTC
Non-coding (UTR)
chr4
109588601
109588723
+


SEQ ID NO. 376
2743194
PGRMC2
Non-coding (Exonic
chr4
129191337
129192099
+





Antisense)


SEQ ID NO. 377
2744632
NAA15
Coding
chr4
140282939
140283030
+


SEQ ID NO. 378
2745687
SMARCA5
Coding
chr4
144465026
144465105
+


SEQ ID NO. 379
2754300
IRF2
Non-coding (Exonic
chr4
185308983
185309251
+





Antisense)


SEQ ID NO. 380
2757037
CTBP1
Non-coding (UTR)
chr4
1205264
1205300



SEQ ID NO. 381
2763813
DHX15
Non-coding (UTR)
chr4
24529196
24529350



SEQ ID NO. 382
2766634
PDS5A
Coding
chr4
39878690
39878768



SEQ ID NO. 383
2770195
AASDH
Non-coding (UTR)
chr4
57204490
57204521



SEQ ID NO. 384
2770473
IGFBP7, RP11-
Non-coding (UTR)
chr4
57897402
57897479





738E22.2


SEQ ID NO. 385
2771759
UBA6
Coding
chr4
68506869
68506938



SEQ ID NO. 386
2773129
ANKRD17
Non-
chr4
74079054
74079088






coding (Intronic)


SEQ ID NO. 387
2774054
SCARB2
Non-coding (UTR)
chr4
77081059
77081265



SEQ ID NO. 388
2775592
HNRPDL
Coding
chr4
83350409
83350477



SEQ ID NO. 389
2775758
SEC31A
Non-coding (UTR)
chr4
83739819
83739846



SEQ ID NO. 390
2776094
FAM175A
Coding
chr4
84383985
84384015



SEQ ID NO. 391
2777492
FAM13A
Non-coding (UTR)
chr4
89647632
89647659



SEQ ID NO. 392
2779488
H2AFZ
Non-coding (UTR)
chr4
100869259
100869283



SEQ ID NO. 393
2779639
PPP3CA
Non-coding (UTR)
chr4
101944595
101944629



SEQ ID NO. 394
2779995
UBE2D3
Non-coding (UTR)
chr4
103717151
103717282



SEQ ID NO. 395
2780545
PPA2
Non-coding (UTR)
chr4
106290788
106290854



SEQ ID NO. 396
2783475
C4orf3
Non-coding (UTR)
chr4
120218228
120218288



SEQ ID NO. 397
2789554
SH3D19
Non-coding (UTR)
chr4
152096727
152096784



SEQ ID NO. 398
2790573
PLRG1
Non-coding (UTR)
chr4
155457687
155457728



SEQ ID NO. 399
2797449
FAT1
Coding
chr4
187560891
187560927



SEQ ID NO. 400
2801338
CTD-2001E22.2
Non-
chr5
9550353
9550381
+





coding (ncTranscript)


SEQ ID NO. 401
2801556
CCT5
Non-coding (UTR)
chr5
10265042
10265108
+


SEQ ID NO. 402
2801679
MARCH6
Coding
chr5
10433706
10433796
+


SEQ ID NO. 403
2802506
TRIO
Coding
chr5
14358400
14358435
+


SEQ ID NO. 404
2805739
RP11-36C20.1
Non-
chr5
33162531
33162567
+





coding (ncTranscript)


SEQ ID NO. 405
2806859
NIPBL
Coding
chr5
36984905
36985298
+


SEQ ID NO. 406
2806912
NIPBL
Coding
chr5
37045613
37045670
+


SEQ ID NO. 407
2807658
AC008810.1
Non-coding (Exonic
chr5
40761189
40761495
+





Antisense)


SEQ ID NO. 408
2809146
PELO
Non-coding (UTR)
chr5
52097805
52097849
+


SEQ ID NO. 409
2810487
GPBP1
Coding
chr5
56531793
56531821
+


SEQ ID NO. 410
2812307
PPWD1
Non-coding (UTR)
chr5
64883290
64883318
+


SEQ ID NO. 411
2812500
ERBB2IP
Coding
chr5
65374321
65374358
+


SEQ ID NO. 412
2812573
SREK1
Coding
chr5
65460623
65460704
+


SEQ ID NO. 413
2817404
PAPD4
Coding
chr5
78919159
78919265
+


SEQ ID NO. 414
2817457
PAPD4
Non-coding (UTR)
chr5
78982421
78982452
+


SEQ ID NO. 415
2818271
RPS23
Non-coding (Exonic
chr5
81573522
81573652
+





Antisense)


SEQ ID NO. 416
2818964
COX7C
Non-coding (UTR)
chr5
85916491
85916564
+


SEQ ID NO. 417
2822274
PAM
Non-coding (UTR)
chr5
102365342
102365372
+


SEQ ID NO. 418
2823066
EFNA5
Non-coding (Intronic
chr5
106974955
106974985
+





Antisense)


SEQ ID NO. 419
2823854
WDR36
Coding
chr5
110456789
110456839
+


SEQ ID NO. 420
2824899
AP3S1
Non-coding (UTR)
chr5
115249432
115249610
+


SEQ ID NO. 421
2828112
HINT1
Non-coding (Exonic
chr5
130495072
130495104
+





Antisense)


SEQ ID NO. 422
2828637
RAD50
Coding
chr5
131939052
131939156
+


SEQ ID NO. 423
2828642
RAD50
Coding
chr5
131945000
131945077
+


SEQ ID NO. 424
2829255
SKP1, PPP2CA
Non-coding (Exonic
chr5
133533062
133533258
+





Antisense)


SEQ ID NO. 425
2829555
C5orf24
Non-coding (UTR)
chr5
134195299
134195382
+


SEQ ID NO. 426
2829679
CTC-203F4.1
Non-
chr5
134670206
134670393
+





coding (Intronic)


SEQ ID NO. 427
2831231
PAIP2
Non-coding (UTR)
chr5
138704988
138705329
+


SEQ ID NO. 428
2831557
C5orf32
Non-coding (UTR)
chr5
139623334
139623371
+


SEQ ID NO. 429
2836687
SAP30L
Non-coding (UTR)
chr5
153835600
153835667
+


SEQ ID NO. 430
2840638
NPM1
Coding
chr5
170832306
170832330
+


SEQ ID NO. 431
2843280
TMED9
Non-coding (UTR)
chr5
177023035
177023099
+


SEQ ID NO. 432
2844248
CANX
Non-coding (UTR)
chr5
179157573
179157623
+


SEQ ID NO. 433
2844250
CANX
Non-coding (UTR)
chr5
179157864
179157894
+


SEQ ID NO. 434
2848258
CCT5
Non-coding (Exonic
chr5
10264858
10265070






Antisense)


SEQ ID NO. 435
2848472
DAP
Non-coding (UTR)
chr5
10679387
10679458



SEQ ID NO. 436
2851973
DROSHA
Coding
chr5
31401461
31401522



SEQ ID NO. 437
2854808
RPL37
Coding
chr5
40834283
40834312



SEQ ID NO. 438
2854809
RPL37
Coding
chr5
40834313
40834356



SEQ ID NO. 439
2855289
SEPP1
Non-coding (UTR)
chr5
42800001
42800083



SEQ ID NO. 440
2855291
SEPP1
Non-coding (UTR)
chr5
42800241
42800298



SEQ ID NO. 441
2855292
SEPP1
Non-coding (UTR)
chr5
42800506
42800717



SEQ ID NO. 442
2857172
DHX29
Coding
chr5
54589903
54589952



SEQ ID NO. 443
2862162
TNPO1
Non-coding (Exonic
chr5
72161442
72161545






Antisense)


SEQ ID NO. 444
2862377
BTF3
Non-coding (Exonic
chr5
72801222
72801281






Antisense)


SEQ ID NO. 445
2865063
RPS23
Non-coding (UTR)
chr5
81571901
81571927



SEQ ID NO. 446
2868141
ERAP1
Non-coding (UTR)
chr5
96110219
96110633



SEQ ID NO. 447
2877518
HSPA9
Coding
chr5
137893091
137893176



SEQ ID NO. 448
2878261
PFDN1
Coding
chr5
139661064
139661115



SEQ ID NO. 449
2882121
SPARC
Non-coding (UTR)
chr5
151042046
151042264



SEQ ID NO. 450
2888344
RNF44
Non-coding (UTR)
chr5
175953724
175953810



SEQ ID NO. 451
2893822
DSP
Coding
chr6
7578699
7578774
+


SEQ ID NO. 452
2893942
TXNDC5, MUTED
Non-coding (Exonic
chr6
7881819
7881943
+





Antisense)


SEQ ID NO. 453
2896978
FAM8A1
Non-coding (UTR)
chr6
17611895
17611944
+


SEQ ID NO. 454
2898531
ALDH5A1
Non-coding (UTR)
chr6
24537390
24537418
+


SEQ ID NO. 455
2902010
DDR1
Non-coding (UTR)
chr6
30867773
30867802
+


SEQ ID NO. 456
2902011
DDR1
Coding
chr6
30867849
30867902
+


SEQ ID NO. 457
2905137
SRSF3
Non-coding (UTR)
chr6
36570141
36570256
+


SEQ ID NO. 458
2906968
PRICKLE4, TOMM6
Non-coding (UTR)
chr6
41757493
41757600
+


SEQ ID NO. 459
2908048
TJAP1
Non-coding (UTR)
chr6
43474171
43474248
+


SEQ ID NO. 460
2909471
CD2AP
Coding
chr6
47580215
47580271
+


SEQ ID NO. 461
2910489
FBXO9
Coding
chr6
52938339
52938411
+


SEQ ID NO. 462
2914002
SENP6
Non-
chr6
76345055
76345281
+





coding (Intronic)


SEQ ID NO. 463
2914107
MYO6
Coding
chr6
76576694
76576822
+


SEQ ID NO. 464
2916383
SLC35A1
Non-coding (UTR)
chr6
88222005
88222043
+


SEQ ID NO. 465
2916976
CASP8AP2
Coding
chr6
90565189
90565242
+


SEQ ID NO. 466
2918543
SFRS18
Non-coding (Exonic
chr6
99846655
99846962
+





Antisense)


SEQ ID NO. 467
2918547
SFRS18
Non-coding (Exonic
chr6
99848935
99849230
+





Antisense)


SEQ ID NO. 468
2922232
MARCKS
Non-coding (UTR)
chr6
114183054
114183145
+


SEQ ID NO. 469
2922235
MARCKS
Non-coding (UTR)
chr6
114184550
114184627
+


SEQ ID NO. 470
2926222
RPS12
Coding
chr6
133138646
133138675
+


SEQ ID NO. 471
2929946
STXBP5
Non-
chr6
147669278
147669305
+





coding (Intronic)


SEQ ID NO. 472
2930652
TAB2
Non-coding (UTR)
chr6
149732661
149732705
+


SEQ ID NO. 473
2932399
SCAF8
Coding
chr6
155126504
155126588
+


SEQ ID NO. 474
2932428
SCAF8
Non-coding (UTR)
chr6
155155164
155155191
+


SEQ ID NO. 475
2933660
TMEM181
Coding
chr6
159001973
159002010
+


SEQ ID NO. 476
2936963
MLLT4
Coding
chr6
168370531
168370582
+


SEQ ID NO. 477
2940827
TXNDC5, MUTED
Non-coding (UTR)
chr6
7881828
7882072



SEQ ID NO. 478
2942512
RANBP9
Coding
chr6
13625915
13625996



SEQ ID NO. 479
2944070
DEK
Non-coding (UTR)
chr6
18224463
18224675



SEQ ID NO. 480
2944963
SOX4
Non-coding (Exonic
chr6
21598569
21598785






Antisense)


SEQ ID NO. 481
2946479
HMGN4
Non-coding (Exonic
chr6
26546937
26547116






Antisense)


SEQ ID NO. 482
2947592
TRIM27
Coding
chr6
28876750
28876789



SEQ ID NO. 483
2948592
TUBB
Non-coding (Exonic
chr6
30691418
30691448






Antisense)


SEQ ID NO. 484
2948596
FLOT1
Non-coding (UTR)
chr6
30695520
30695552



SEQ ID NO. 485
2949053
DDX39B
Non-
chr6
31500977
31501368






coding (ncTranscript)


SEQ ID NO. 486
2949061
XXbac-
Coding
chr6
31504283
31504313





BPG296P20.16.DDX39B


SEQ ID NO. 487
2951060
C6orf1
Non-coding (UTR)
chr6
34214199
34214278



SEQ ID NO. 488
2956077
TNFRSF21
Coding
chr6
47252104
47252155



SEQ ID NO. 489
2958402
DST
Coding
chr6
56394805
56394917



SEQ ID NO. 490
2961302
COX7A2
Coding
chr6
75947554
75947636



SEQ ID NO. 491
2966293
SFRS18
Non-coding (UTR)
chr6
99864226
99864304



SEQ ID NO. 492
2966378
CCNC
Non-coding (UTR)
chr6
99990291
99990460



SEQ ID NO. 493
2967164
HACE1
Non-coding (UTR)
chr6
105176560
105176777



SEQ ID NO. 494
2967323
PREP
Non-coding (UTR)
chr6
105725610
105725643



SEQ ID NO. 495
2968257
SNX3
Coding
chr6
108581964
108581997



SEQ ID NO. 496
2968653
SESN1
Non-coding (UTR)
chr6
109307670
109307727



SEQ ID NO. 497
2974195
MED23
Coding
chr6
131907897
131907950



SEQ ID NO. 498
2974332
CTGF
Non-coding (UTR)
chr6
132269390
132269425



SEQ ID NO. 499
2975686
BCLAF1
Non-coding (UTR)
chr6
136580814
136581178



SEQ ID NO. 500
2975709
BCLAF1
Coding
chr6
136594260
136594296



SEQ ID NO. 501
2976368
PERP
Non-coding (UTR)
chr6
138412032
138412084



SEQ ID NO. 502
2977521
FUCA2
Non-coding (UTR)
chr6
143816625
143816660



SEQ ID NO. 503
2981918
EZR
Non-coding (UTR)
chr6
159187437
159187559



SEQ ID NO. 504
2982323
SOD2
Non-coding (UTR)
chr6
160100449
160100520



SEQ ID NO. 505
2982385
TCP1
Coding
chr6
160200252
160200282



SEQ ID NO. 506
2984576
SFT2D1
Non-coding (UTR)
chr6
166733526
166733682



SEQ ID NO. 507
2985813
THBS2
Non-coding (UTR)
chr6
169617449
169617654



SEQ ID NO. 508
2985965
WDR27
Non-coding (UTR)
chr6
169857317
169857350



SEQ ID NO. 509
2988895
AIMP2
Non-coding (UTR)
chr7
6063363
6063418
+


SEQ ID NO. 510
2988896
AIMP2
Non-coding (UTR)
chr7
6063425
6063456
+


SEQ ID NO. 511
2989720
AC007128.1, AC007009.1
Non-
chr7
8302393
8302437
+





coding (ncTranscript)


SEQ ID NO. 512
2991248
AHR
Coding
chr7
17373588
17373738
+


SEQ ID NO. 513
2991263
AHR
Non-coding (UTR)
chr7
17382754
17383243
+


SEQ ID NO. 514
2991264
AHR
Non-coding (UTR)
chr7
17383478
17384186
+


SEQ ID NO. 515
2993622
HNRNPA2B1
Non-coding (Exonic
chr7
26230040
26230071
+





Antisense)


SEQ ID NO. 516
2993644
CBX3
Non-coding (UTR)
chr7
26242591
26242618
+


SEQ ID NO. 517
2993659
CBX3
Non-coding (UTR)
chr7
26252158
26252837
+


SEQ ID NO. 518
2994371
TAX1BP1
Non-
chr7
27841295
27841322
+





coding (Intronic)


SEQ ID NO. 519
2995598
AQP1
Non-coding (UTR)
chr7
30965061
30965090
+


SEQ ID NO. 520
2997143
SEPT7
Coding
chr7
35930330
35930354
+


SEQ ID NO. 521
3002667
EGFR
Non-
chr7
55111601
55111721
+





coding (ncTranscript)


SEQ ID NO. 522
3003180
GBAS
Non-coding (UTR)
chr7
56067815
56067843
+


SEQ ID NO. 523
3004652
chr7+: 64171405-64171435
Non-
chr7
64171405
64171435
+





coding (Intergenic)


SEQ ID NO. 524
3011652
EEF1A1P28
Non-
chr7
88269706
88269736
+





coding (ncTranscript)


SEQ ID NO. 525
3011846
STEAP1
Non-coding (UTR)
chr7
89794089
89794119
+


SEQ ID NO. 526
3012405
AKAP9
Coding
chr7
91624943
91625038
+


SEQ ID NO. 527
3012428
AKAP9
Coding
chr7
91670017
91670138
+


SEQ ID NO. 528
3012438
AKAP9
Coding
chr7
91682056
91682090
+


SEQ ID NO. 529
3012452
AKAP9
Coding
chr7
91700231
91700287
+


SEQ ID NO. 530
3012453
AKAP9
Coding
chr7
91700288
91700319
+


SEQ ID NO. 531
3013190
CASD1
Coding
chr7
94147516
94147581
+


SEQ ID NO. 532
3013468
PON2
Non-coding (Intronic
chr7
95042749
95042946
+





Antisense)


SEQ ID NO. 533
3013685
SLC25A13
Non-coding (Exonic
chr7
95749570
95749793
+





Antisense)


SEQ ID NO. 534
3014422
TRRAP
Coding
chr7
98493399
98493443
+


SEQ ID NO. 535
3015985
SRRT
Coding
chr7
100486179
100486273
+


SEQ ID NO. 536
3017629
MLL5
Coding
chr7
104746413
104746442
+


SEQ ID NO. 537
3017826
RINT1
Non-coding (UTR)
chr7
105208082
105208113
+


SEQ ID NO. 538
3021760
WASL
Non-coding (Exonic
chr7
123324045
123324364
+





Antisense)


SEQ ID NO. 539
3022682
SND1
Non-coding (UTR)
chr7
127732585
127732630
+


SEQ ID NO. 540
3027555
NDUFB2
Non-coding (UTR)
chr7
140406369
140406414
+


SEQ ID NO. 541
3027926
SSBP1
Coding
chr7
141443718
141443782
+


SEQ ID NO. 542
3027936
SSBP1
Non-coding (UTR)
chr7
141450185
141450241
+


SEQ ID NO. 543
3037391
KDELR2
Non-coding (UTR)
chr7
6502522
6502596



SEQ ID NO. 544
3037406
KDELR2
Coding
chr7
6513851
6513887



SEQ ID NO. 545
3037950
RPA3
Non-coding (UTR)
chr7
7676584
7676627



SEQ ID NO. 546
3039980
AHR
Non-coding (Exonic
chr7
17382756
17383093






Antisense)


SEQ ID NO. 547
3039983
AHR
Non-coding (Exonic
chr7
17384068
17384200






Antisense)


SEQ ID NO. 548
3040116
SNX13
Coding
chr7
17915324
17915397



SEQ ID NO. 549
3041262
TOMM7
Non-coding (UTR)
chr7
22852644
22852678



SEQ ID NO. 550
3042004
CYCS
Non-coding (UTR)
chr7
25162509
25162708



SEQ ID NO. 551
3042424
HNRNPA2B1
Non-coding (UTR)
chr7
26229786
26229921



SEQ ID NO. 552
3042426
HNRNPA2B1
Non-coding (UTR)
chr7
26230047
26230074



SEQ ID NO. 553
3042429
HNRNPA2B1
Non-coding (UTR)
chr7
26230678
26230737



SEQ ID NO. 554
3042430
HNRNPA2B1
Non-coding (UTR)
chr7
26230767
26230996



SEQ ID NO. 555
3042437
HNRNPA2B1
Non-coding (UTR)
chr7
26231796
26231958



SEQ ID NO. 556
3042453
HNRNPA2B1
Coding
chr7
26236208
26236278



SEQ ID NO. 557
3048780
TMED4
Non-coding (UTR)
chr7
44617913
44617943



SEQ ID NO. 558
3048870
H2AFV
Non-coding (UTR)
chr7
44866413
44866768



SEQ ID NO. 559
3053384
chr7−: 64435274-64435303
Non-
chr7
64435274
64435303






coding (Intergenic)


SEQ ID NO. 560
3056395
EIF4H
Non-coding (Exonic
chr7
73611210
73611234






Antisense)


SEQ ID NO. 561
3060052
DMTF1
Non-coding (Exonic
chr7
86824937
86825415






Antisense)


SEQ ID NO. 562
3061054
AC000120.7, KRIT1
Non-coding (UTR)
chr7
91829356
91829670



SEQ ID NO. 563
3061144
ANKIB1
Non-coding (Exonic
chr7
92029299
92029375






Antisense)


SEQ ID NO. 564
3061758
COL1A2
Non-coding (Exonic
chr7
94058608
94058723






Antisense)


SEQ ID NO. 565
3062023
PON2
Non-
chr7
95041837
95042319






coding (ncTranscript)


SEQ ID NO. 566
3064354
SRRT
Non-coding (Exonic
chr7
100486138
100486258






Antisense)


SEQ ID NO. 567
3075645
chr7−: 138912234-138912268
Non-
chr7
138912234
138912268






coding (Intergenic)


SEQ ID NO. 568
3076355
NDUFB2
Non-coding (Intronic
chr7
140419154
140419193






Antisense)


SEQ ID NO. 569
3076393
BRAF
Coding
chr7
140501240
140501268



SEQ ID NO. 570
3076490
MRPS33
Non-coding (UTR)
chr7
140705974
140706021



SEQ ID NO. 571
3081625
LMBR1
Non-coding (UTR)
chr7
156475639
156475683



SEQ ID NO. 572
3087828
PCM1
Coding
chr8
17810521
17810685
+


SEQ ID NO. 573
3087930
ASAH1
Non-coding (Exonic
chr8
17924332
17924610
+





Antisense)


SEQ ID NO. 574
3088570
ATP6V1B2
Non-coding (UTR)
chr8
20079154
20079183
+


SEQ ID NO. 575
3092505
RBPMS
Non-coding (UTR)
chr8
30404975
30405013
+


SEQ ID NO. 576
3094309
PROSC
Non-coding (UTR)
chr8
37637241
37637268
+


SEQ ID NO. 577
3096162
IKBKB
Non-coding (UTR)
chr8
42189466
42189790
+


SEQ ID NO. 578
3096409
HOOK3
Coding
chr8
42862996
42863063
+


SEQ ID NO. 579
3096979
KIAA0146
Coding
chr8
48309034
48309125
+


SEQ ID NO. 580
3099780
SDCBP
Non-coding (UTR)
chr8
59495253
59495349
+


SEQ ID NO. 581
3100230
RAB2A
Non-coding (UTR)
chr8
61533537
61533612
+


SEQ ID NO. 582
3107638
DPY19L4
Coding
chr8
95795948
95795975
+


SEQ ID NO. 583
3108472
MTDH
Coding
chr8
98731359
98731417
+


SEQ ID NO. 584
3108501
LAPTM4B
Coding
chr8
98828334
98828363
+


SEQ ID NO. 585
3108938
VPS13B
Coding
chr8
100160128
100160223
+


SEQ ID NO. 586
3111090
AC090579.1
Coding
chr8
107719006
107719178
+


SEQ ID NO. 587
3111116
AC090579.1
Non-coding (UTR)
chr8
107764863
107764893
+


SEQ ID NO. 588
3112517
EIF3H
Non-coding (Exonic
chr8
117657108
117657268
+





Antisense)


SEQ ID NO. 589
3114370
FAM91A1
Coding
chr8
124792239
124792277
+


SEQ ID NO. 590
3114664
NDUFB9
Non-coding (UTR)
chr8
125562138
125562181
+


SEQ ID NO. 591
3124536
FDFT1
Non-coding (Exonic
chr8
11696124
11696400






Antisense)


SEQ ID NO. 592
3126094
ASAH1
Non-coding (UTR)
chr8
17913971
17914068



SEQ ID NO. 593
3128680
SDADIP1
Non-
chr8
26238141
26238174






coding (ncTranscript)


SEQ ID NO. 594
3129955
TMEM66
Coding
chr8
29923504
29923543



SEQ ID NO. 595
3131973
WHSC1L1
Coding
chr8
38205449
38205479



SEQ ID NO. 596
3132336
TM2D2
Non-coding (UTR)
chr8
38848290
38848319



SEQ ID NO. 597
3133528
RP11-
Non-coding (Exonic
chr8
42882619
42882650





598P20.5, HOOK3
Antisense)


SEQ ID NO. 598
3134184
PRKDC
Coding
chr8
48852116
48852256



SEQ ID NO. 599
3136352
RP11-17A4.1
Non-coding (Exonic
chr8
57501108
57501163






Antisense)


SEQ ID NO. 600
3137586
ASPH
Non-coding (UTR)
chr8
62537157
62537642



SEQ ID NO. 601
3138886
SNHG6
Non-
chr8
67834852
67834955






coding (ncTranscript)


SEQ ID NO. 602
3138980
COPS5
Non-coding (UTR)
chr8
67955322
67955454



SEQ ID NO. 603
3139053
ARFGEF1
Coding
chr8
68112673
68112748



SEQ ID NO. 604
3139926
TRAM1
Coding
chr8
71510160
71510244



SEQ ID NO. 605
3141863
TPD52
Non-coding (UTR)
chr8
80948831
80948859



SEQ ID NO. 606
3145023
KIAA1429
Non-coding (UTR)
chr8
95500766
95500848



SEQ ID NO. 607
3145956
RPL30
Coding
chr8
99054030
99054078



SEQ ID NO. 608
3145966
RPL30
Coding
chr8
99057186
99057310



SEQ ID NO. 609
3146538
POLR2K
Non-coding (Exonic
chr8
101166096
101166165






Antisense)


SEQ ID NO. 610
3146566
RNF19A
Non-coding (UTR)
chr8
101269317
101269521



SEQ ID NO. 611
3146788
PABPC1
Non-coding (UTR)
chr8
101715241
101715454



SEQ ID NO. 612
3146799
PABPC1
Coding
chr8
101721421
101721445



SEQ ID NO. 613
3147328
UBR5
Coding
chr8
103269860
103269932



SEQ ID NO. 614
3148628
EIF3E
Coding
chr8
109240515
109240544



SEQ ID NO. 615
3149768
EIF3H
Non-coding (UTR)
chr8
117657087
117657221



SEQ ID NO. 616
3149773
EIF3H
Coding
chr8
117661058
117661159



SEQ ID NO. 617
3149864
RAD21
Coding
chr8
117868898
117868928



SEQ ID NO. 618
3151480
C8orf76
Non-coding (UTR)
chr8
124232257
124232285



SEQ ID NO. 619
3152560
FAM84B
Non-coding (UTR)
chr8
127564856
127565021



SEQ ID NO. 620
3153532
ASAP1
Coding
chr8
131199487
131199516



SEQ ID NO. 621
3157388
TOP1MT
Non-coding (UTR)
chr8
144391539
144391610



SEQ ID NO. 622
3157461
ZC3H3
Non-coding (UTR)
chr8
144519831
144519864



SEQ ID NO. 623
3157723
FAM83H
Non-coding (UTR)
chr8
144806118
144806196



SEQ ID NO. 624
3157847
NRBP2
Non-coding (UTR)
chr8
144915923
144916015



SEQ ID NO. 625
3164299
DENND4C
Non-coding (UTR)
chr9
19373469
19374005
+


SEQ ID NO. 626
3165138
RP11-370B11.1
Non-
chr9
22748070
22748104
+





coding (ncTranscript)


SEQ ID NO. 627
3165799
IFT74
Coding
chr9
27018647
27018685
+


SEQ ID NO. 628
3166029
chr9+: 27943648-27943678
Non-
chr9
27943648
27943678
+





coding (Intergenic)


SEQ ID NO. 629
3166735
DNAJA1
Coding
chr9
33038903
33038998
+


SEQ ID NO. 630
3167990
RP11-156G14.6
Non-
chr9
35592905
35592943
+





coding (ncTranscript)


SEQ ID NO. 631
3168127
GBA2
Non-coding (Exonic
chr9
35738843
35738870
+





Antisense)


SEQ ID NO. 632
3169011
FRMPD1
Coding
chr9
37735573
37735720
+


SEQ ID NO. 633
3174268
SMC5
Coding
chr9
72967152
72967246
+


SEQ ID NO. 634
3174441
C9orf85
Non-coding (UTR)
chr9
74588315
74588354
+


SEQ ID NO. 635
3175632
VPS13A
Coding
chr9
79895103
79895154
+


SEQ ID NO. 636
3175657
VPS13A
Coding
chr9
79936422
79936637
+


SEQ ID NO. 637
3178635
SECISBP2
Coding
chr9
91949555
91949616
+


SEQ ID NO. 638
3183178
SLC44A1
Non-coding (UTR)
chr9
108152027
108152059
+


SEQ ID NO. 639
3190449
CERCAM, AL359091.1
Coding
chr9
131199594
131199623
+


SEQ ID NO. 640
3192674
GTF3C5
Coding
chr9
135929237
135929328
+


SEQ ID NO. 641
3197644
ERMP1
Non-coding (UTR)
chr9
5784578
5784615



SEQ ID NO. 642
3199457
ZDHHC21
Non-coding (UTR)
chr9
14617270
14617297



SEQ ID NO. 643
3199485
ZDHHC21, AL390732.1
Non-
chr9
14679025
14679408






coding (Intronic)


SEQ ID NO. 644
3200638
HAUS6
Coding
chr9
19087118
19087151



SEQ ID NO. 645
3200711
DENND4C
Non-coding (Exonic
chr9
19373580
19373641






Antisense)


SEQ ID NO. 646
3200718
RPS6
Coding
chr9
19376535
19376564



SEQ ID NO. 647
3200725
RPS6
Coding
chr9
19378719
19378755



SEQ ID NO. 648
3203822
UBAP2
Coding
chr9
33996241
33996307



SEQ ID NO. 649
3205039
RP11-327L3.5
Non-
chr9
35971885
35971912






coding (ncTranscript)


SEQ ID NO. 650
3205424
ZCCHC7
Non-coding (Intronic
chr9
37193836
37193865






Antisense)


SEQ ID NO. 651
3212146
UBQLN1
Non-coding (UTR)
chr9
86275826
86276211



SEQ ID NO. 652
3212163
UBQLN1
Coding
chr9
86294773
86294919



SEQ ID NO. 653
3214671
IARS
Coding
chr9
94973097
94973125



SEQ ID NO. 654
3214699
IARS
Coding
chr9
95012528
95012559



SEQ ID NO. 655
3219683
C9orf5
Non-coding (UTR)
chr9
111777496
111777531



SEQ ID NO. 656
3219711
C9orf5
Coding
chr9
111822639
111822721



SEQ ID NO. 657
3219891
PTPN3
Non-coding (UTR)
chr9
112140545
112140610



SEQ ID NO. 658
3220159
TXN
Non-coding (UTR)
chr9
113006334
113006361



SEQ ID NO. 659
3222054
ATP6V1G1
Non-coding (Exonic
chr9
117360479
117360624






Antisense)


SEQ ID NO. 660
3222984
RP11-442A13.1
Non-
chr9
120845349
120845391






coding (ncTranscript)


SEQ ID NO. 661
3223876
RAB14
Non-coding (UTR)
chr9
123943110
123943464



SEQ ID NO. 662
3225580
PBX3
Non-coding (Intronic
chr9
128526259
128526303






Antisense)


SEQ ID NO. 663
3226470
GOLGA2
Coding
chr9
131028567
131028595



SEQ ID NO. 664
3227646
UCK1
Non-coding (UTR)
chr9
134399202
134399229



SEQ ID NO. 665
3233387
C10orf18
Non-coding (UTR)
chr10
5805626
5805670
+


SEQ ID NO. 666
3234175
ATP5C1
Non-coding (UTR)
chr10
7849648
7849732
+


SEQ ID NO. 667
3235500
CDC123
Coding
chr10
12292460
12292553
+


SEQ ID NO. 668
3237000
VIM
Non-coding (UTR)
chr10
17279281
17279308
+


SEQ ID NO. 669
3237001
VIM
Non-coding (UTR)
chr10
17279361
17279398
+


SEQ ID NO. 670
3239927
ABI1
Non-coding (Exonic
chr10
27036907
27037562
+





Antisense)


SEQ ID NO. 671
3239982
YME1L1
Non-coding (Exonic
chr10
27399495
27399646
+





Antisense)


SEQ ID NO. 672
3240135
RAB18
Non-coding (UTR)
chr10
27828060
27828089
+


SEQ ID NO. 673
3240409
WAC
Coding
chr10
28899657
28899737
+


SEQ ID NO. 674
3240425
WAC
Non-coding (UTR)
chr10
28909409
28909439
+


SEQ ID NO. 675
3241499
KIF5B
Non-coding (Exonic
chr10
32299937
32300224
+





Antisense)


SEQ ID NO. 676
3241506
KIF5B
Non-coding (Exonic
chr10
32321635
32321697
+





Antisense)


SEQ ID NO. 677
3243292
HSD17B7P2
Non-
chr10
38667320
38667344
+





coding (ncTranscript)


SEQ ID NO. 678
3250201
VPS26A
Non-coding (UTR)
chr10
70932578
70932609
+


SEQ ID NO. 679
3251409
DDIT4
Non-coding (UTR)
chr10
74035646
74035717
+


SEQ ID NO. 680
3252608
VDAC2
Non-coding (UTR)
chr10
76990904
76990928
+


SEQ ID NO. 681
3253445
RPS24
Coding
chr10
79795283
79795370
+


SEQ ID NO. 682
3253863
ZMIZ1
Non-coding (UTR)
chr10
81076140
81076245
+


SEQ ID NO. 683
3255269
GHITM
Non-coding (UTR)
chr10
85912224
85912254
+


SEQ ID NO. 684
3257404
KIF20B
Non-coding (UTR)
chr10
91534618
91534656
+


SEQ ID NO. 685
3258021
BTAF1
Non-coding (UTR)
chr10
93790008
93790053
+


SEQ ID NO. 686
3259678
LCOR
Non-coding (UTR)
chr10
98719067
98719119
+


SEQ ID NO. 687
3261550
GBF1
Coding
chr10
104019825
104019856
+


SEQ ID NO. 688
3262470
SLK
Coding
chr10
105778558
105778664
+


SEQ ID NO. 689
3263804
SMC3
Coding
chr10
112342321
112342395
+


SEQ ID NO. 690
3264697
TCF7L2
Coding
chr10
114911484
114911512
+


SEQ ID NO. 691
3264726
TCF7L2
Non-coding (UTR)
chr10
114927386
114927419
+


SEQ ID NO. 692
3275175
GDI2
Coding
chr10
5842593
5842621



SEQ ID NO. 693
3276455
KIN
Coding
chr10
7822227
7822261



SEQ ID NO. 694
3277709
UPF2
Coding
chr10
12041905
12041992



SEQ ID NO. 695
3279906
VIM
Non-coding (Exonic
chr10
17279228
17279424






Antisense)


SEQ ID NO. 696
3280961
DNAJC1
Non-
chr10
22268411
22268452






coding (Intronic)


SEQ ID NO. 697
3282022
AB11
Non-coding (UTR)
chr10
27037123
27037168



SEQ ID NO. 698
3282170
ANKRD26
Coding
chr10
27342283
27342313



SEQ ID NO. 699
3282215
YME1L1
Non-coding (UTR)
chr10
27399405
27399460



SEQ ID NO. 700
3282220
YME1L1
Non-coding (UTR)
chr10
27400692
27400769



SEQ ID NO. 701
3282254
YME1L1
Coding
chr10
27434387
27434415



SEQ ID NO. 702
3284025
KIF5B
Coding
chr10
32326449
32326532



SEQ ID NO. 703
3284217
ITGB1
Coding
chr10
33218756
33218953



SEQ ID NO. 704
3284603
PARD3
Non-coding (UTR)
chr10
34400052
34400096



SEQ ID NO. 705
3284665
PARD3
Non-coding (UTR)
chr10
34601224
34601273



SEQ ID NO. 706
3294341
DNAJC9, MRPS16
Non-coding (UTR)
chr10
75008616
75008693



SEQ ID NO. 707
3294501
PPP3CB
Non-coding (UTR)
chr10
75196574
75196612



SEQ ID NO. 708
3298980
GLUD1
Non-coding (UTR)
chr10
88810786
88810903



SEQ ID NO. 709
3301222
PDLIM1
Non-coding (UTR)
chr10
96997343
96997375



SEQ ID NO. 710
3301703
ZNF518A
Non-coding (Exonic
chr10
97919238
97919382






Antisense)


SEQ ID NO. 711
3301858
TM9SF3
Non-coding (UTR)
chr10
98277891
98277925



SEQ ID NO. 712
3301863
TM9SF3
Non-coding (UTR)
chr10
98281306
98281546



SEQ ID NO. 713
3302047
LCOR
Non-coding (Exonic
chr10
98723611
98724126






Antisense)


SEQ ID NO. 714
3304013
MGEA5
Non-coding (UTR)
chr10
103544229
103544292



SEQ ID NO. 715
3304626
NT5C2
Non-coding (UTR)
chr10
104847820
104847904



SEQ ID NO. 716
3304652
NT5C2
Coding
chr10
104860992
104861082



SEQ ID NO. 717
3307940
ABLIM1
Non-coding (UTR)
chr10
116190884
116190918



SEQ ID NO. 718
3308532
KIAA1598
Coding
chr10
118700019
118700070



SEQ ID NO. 719
3309267
EIF3A
Coding
chr10
120816451
120816552



SEQ ID NO. 720
3311304
FAM53B
Non-
chr10
126370080
126370121






coding (Intronic)


SEQ ID NO. 721
3317557
AC131971.3
Non-
chr11
2965724
2965773
+





coding (ncTranscript)


SEQ ID NO. 722
3325714
EIF3M
Coding
chr11
32623308
32623345
+


SEQ ID NO. 723
3325963
HIPK3
Non-coding (UTR)
chr11
33378433
33378548
+


SEQ ID NO. 724
3326246
CAPRIN1
Non-coding (UTR)
chr11
34122068
34122389
+


SEQ ID NO. 725
3326465
EHF
Non-
chr11
34644499
34644527
+





coding (Intronic)


SEQ ID NO. 726
3329941
FNBP4
Non-coding (Exonic
chr11
47738349
47738675
+





Antisense)


SEQ ID NO. 727
3331532
CTNND1, RP11-
Non-
chr11
57530665
57530828
+




691N7.7, RP11-
coding (Intronic)




691N7.6


SEQ ID NO. 728
3331573
CTNND1
Coding
chr11
57577586
57577659
+


SEQ ID NO. 729
3331613
C11orf31, RP11-
Non-coding (UTR)
chr11
57510340
57510456
+




691N7.6


SEQ ID NO. 730
3331614
C11orf31
Non-coding (UTR)
chr11
57510457
57510487
+


SEQ ID NO. 731
3333687
NXF1
Non-coding (Exonic
chr11
62559649
62559673
+





Antisense)


SEQ ID NO. 732
3334162
OTUB1
Non-coding (UTR)
chr11
63765054
63765087
+


SEQ ID NO. 733
3334515
PRDX5
Non-coding (UTR)
chr11
64089219
64089254
+


SEQ ID NO. 734
3335173
MALAT1
Non-
chr11
65268541
65268772
+





coding (ncTranscript)


SEQ ID NO. 735
3335176
MALAT1
Non-
chr11
65269878
65270060
+





coding (ncTranscript)


SEQ ID NO. 736
3335178
MALAT1
Non-
chr11
65270566
65270941
+





coding (ncTranscript)


SEQ ID NO. 737
3335179
MALAT1
Non-
chr11
65271104
65271134
+





coding (ncTranscript)


SEQ ID NO. 738
3335181
MALAT1
Non-
chr11
65271308
65271537
+





coding (ncTranscript)


SEQ ID NO. 739
3335182
MALAT1
Non-
chr11
65271622
65271671
+





coding (ncTranscript)


SEQ ID NO. 740
3335187
MALAT1
Non-
chr11
65272277
65272473
+





coding (ncTranscript)


SEQ ID NO. 741
3335188
MALAT1
Non-
chr11
65272569
65272745
+





coding (ncTranscript)


SEQ ID NO. 742
3335189
MALAT1
Non-
chr11
65272758
65272932
+





coding (ncTranscript)


SEQ ID NO. 743
3335191
MALAT1
Non-
chr11
65273073
65273133
+





coding (ncTranscript)


SEQ ID NO. 744
3335231
NEAT1
Non-
chr11
65198362
65198453
+





coding (ncTranscript)


SEQ ID NO. 745
3337724
PPP6R3
Non-coding (UTR)
chr11
68380696
68382033
+


SEQ ID NO. 746
3338618
CTTN
Non-coding (UTR)
chr11
70282540
70282638
+


SEQ ID NO. 747
3341466
C11orf67
Non-coding (UTR)
chr11
77583362
77583395
+


SEQ ID NO. 748
3341504
NDUFC2
Non-coding (Exonic
chr11
77780928
77781047
+





Antisense)


SEQ ID NO. 749
3344853
KIAA1731
Non-coding (UTR)
chr11
93463465
93463495
+


SEQ ID NO. 750
3344889
C11orf54
Non-coding (UTR)
chr11
93496161
93496200
+


SEQ ID NO. 751
3345453
ENDOD1
Non-coding (UTR)
chr11
94865773
94865801
+


SEQ ID NO. 752
3347691
ATM
Coding
chr11
108138023
108138050
+


SEQ ID NO. 753
3352533
ARHGEF12
Coding
chr11
120278450
120278520
+


SEQ ID NO. 754
3352561
ARHGEF12
Coding
chr11
120316131
120316173
+


SEQ ID NO. 755
3352585
ARHGEF12
Coding
chr11
120335995
120336070
+


SEQ ID NO. 756
3352925
SC5DL
Coding
chr11
121178187
121178220
+


SEQ ID NO. 757
3354966
NAPIL1P1
Non-
chr11
125938163
125938203
+





coding (ncTranscript)


SEQ ID NO. 758
3356173
APLP2
Non-coding (UTR)
chr11
130013877
130014133
+


SEQ ID NO. 759
3358364
PDDC1
Coding
chr11
767235
767266



SEQ ID NO. 760
3359382
KCNQ1
Non-coding (Intronic
chr11
2717173
2717259






Antisense)


SEQ ID NO. 761
3362739
EIF4G2
Coding
chr11
10821117
10821149



SEQ ID NO. 762
3362742
EIF4G2
Coding
chr11
10821676
10821713



SEQ ID NO. 763
3362745
EIF4G2
Coding
chr11
10821991
10822194



SEQ ID NO. 764
3362763
EIF4G2
Non-
chr11
10825209
10825432






coding (ncTranscript)


SEQ ID NO. 765
3362773
EIF4G2
Non-
chr11
10828449
10828622






coding (ncTranscript)


SEQ ID NO. 766
3362943
ZBED5
Non-coding (UTR)
chr11
10874366
10874401



SEQ ID NO. 767
3363519
TEAD1
Non-coding (Exonic
chr11
12965256
12965362






Antisense)


SEQ ID NO. 768
3363981
PSMA1
Non-coding (UTR)
chr11
14526493
14526586



SEQ ID NO. 769
3364729
RPS13
Coding
chr11
17096711
17096738



SEQ ID NO. 770
3364770
PIK3C2A
Coding
chr11
17112883
17112975



SEQ ID NO. 771
3364800
PIK3C2A
Non-
chr11
17150520
17150651






coding (Intronic)


SEQ ID NO. 772
3368920
CAPRIN1
Non-coding (Exonic
chr11
34121109
34121645






Antisense)


SEQ ID NO. 773
3371737
CKAP5
Coding
chr11
46780476
46780582



SEQ ID NO. 774
3372461
FNBP4
Non-coding (UTR)
chr11
47738082
47738123



SEQ ID NO. 775
3375309
CYBASC3
Non-coding (UTR)
chr11
61116287
61116314



SEQ ID NO. 776
3375752
AHNAK
Coding
chr11
62288763
62288870



SEQ ID NO. 777
3375863
MTA2
Non-coding (UTR)
chr11
62360703
62360739



SEQ ID NO. 778
3376090
RP11-
Coding
chr11
62482992
62483073





831H9.16, HNRNP




UL2


SEQ ID NO. 779
3376775
STIP1
Non-coding (Exonic
chr11
63971039
63971068






Antisense)


SEQ ID NO. 780
3377457
ZNHIT2
Non-coding (UTR)
chr11
64883876
64883909



SEQ ID NO. 781
3377464
FAU
Non-coding (UTR)
chr11
64888125
64888152



SEQ ID NO. 782
3377621
NEAT1
Non-coding (Exonic
chr11
65197863
65198674






Antisense)


SEQ ID NO. 783
3377623
NEAT1
Non-coding (Exonic
chr11
65199459
65199866






Antisense)


SEQ ID NO. 784
3377625
NEAT1
Non-coding (Exonic
chr11
65200367
65201041






Antisense)


SEQ ID NO. 785
3377632
NEAT1
Non-coding (Exonic
chr11
65204836
65204978






Antisense)


SEQ ID NO. 786
3377633
NEAT1
Non-coding (Exonic
chr11
65205053
65205164






Antisense)


SEQ ID NO. 787
3377659
MALAT1
Non-coding (Exonic
chr11
65271852
65272483






Antisense)


SEQ ID NO. 788
3377660
MALAT1
Non-coding (Exonic
chr11
65272684
65273443






Antisense)


SEQ ID NO. 789
3379122
RPL37P2
Non-
chr11
67450210
67450359






coding (ncTranscript)


SEQ ID NO. 790
3379574
PPP6R3
Non-coding (Exonic
chr11
68382665
68382760






Antisense)


SEQ ID NO. 791
3382981
RSF1
Coding
chr11
77383104
77383245



SEQ ID NO. 792
3382984
RSF1
Coding
chr11
77387892
77388043



SEQ ID NO. 793
3383148
NDUFC2
Coding
chr11
77780919
77780950



SEQ ID NO. 794
3383149
NDUFC2
Coding
chr11
77780951
77781016



SEQ ID NO. 795
3384489
CCDC90B
Coding
chr11
82984696
82984729



SEQ ID NO. 796
3384495
CCDC90B
Coding
chr11
82985729
82985759



SEQ ID NO. 797
3385045
SYTL2
Non-coding (UTR)
chr11
85406077
85406206



SEQ ID NO. 798
3385178
chr11−: 85668255-85668284
Non-
chr11
85668255
85668284






coding (Intergenic)


SEQ ID NO. 799
3386816
TAF1D
Non-coding (UTR)
chr11
93463398
93463437



SEQ ID NO. 800
3387176
CWC15
Non-
chr11
94696550
94696588






coding (ncTranscript)


SEQ ID NO. 801
3387436
FAM76B
Non-
chr11
95512328
95512401






coding (ncTranscript)


SEQ ID NO. 802
3388633
TMEM123
Non-coding (UTR)
chr11
102268975
102269230



SEQ ID NO. 803
3393789
RP11-770J1.5
Non-
chr11
118269809
118269884






coding (Intronic)


SEQ ID NO. 804
3394076
RPS25
Coding
chr11
118888186
118888210



SEQ ID NO. 805
3394529
PVRL1
Non-
chr11
119561120
119561157






coding (Intronic)


SEQ ID NO. 806
3395420
HSPA8
Non-coding (UTR)
chr11
122928373
122928441



SEQ ID NO. 807
3395427
HSPA8
Coding
chr11
122929366
122929425



SEQ ID NO. 808
3400152
WNK1
Non-
chr12
997620
997790
+





coding (Intronic)


SEQ ID NO. 809
3402624
NCAPD2
Non-coding (UTR)
chr12
6640984
6641092
+


SEQ ID NO. 810
3402667
CHD4
Non-coding (Exonic
chr12
6679340
6679405
+





Antisense)


SEQ ID NO. 811
3402720
COPS7A
Non-coding (UTR)
chr12
6840982
6841012
+


SEQ ID NO. 812
3406062
ATF7IP
Coding
chr12
14578178
14578407
+


SEQ ID NO. 813
3407177
PLEKHA5
Non-
chr12
19462808
19462891
+





coding (Intronic)


SEQ ID NO. 814
3407275
AEBP2
Non-coding (UTR)
chr12
19673066
19673136
+


SEQ ID NO. 815
3409292
PPFIBP1
Coding
chr12
27845759
27845805
+


SEQ ID NO. 816
3412651
ANO6
Coding
chr12
45822918
45822963
+


SEQ ID NO. 817
3414226
TMBIM6
Non-coding (UTR)
chr12
50158602
50158686
+


SEQ ID NO. 818
3416068
PCBP2
Coding
chr12
53862564
53862605
+


SEQ ID NO. 819
3416501
HNRNPA1
Non-coding (UTR)
chr12
54678679
54679003
+


SEQ ID NO. 820
3417160
CDK2
Non-coding (UTR)
chr12
56366537
56366564
+


SEQ ID NO. 821
3417666
ATP5B
Non-coding (Exonic
chr12
57032010
57032118
+





Antisense)


SEQ ID NO. 822
3418209
MARS
Non-coding (UTR)
chr12
57910381
57910412
+


SEQ ID NO. 823
3419262
MON2
Coding
chr12
62895382
62895464
+


SEQ ID NO. 824
3419622
RP11-415112.6
Non-
chr12
64216729
64216755
+





coding (ncTranscript)


SEQ ID NO. 825
3421154
RAP1B
Non-coding (UTR)
chr12
69054240
69054272
+


SEQ ID NO. 826
3421223
NUP107
Non-coding (UTR)
chr12
69136358
69136416
+


SEQ ID NO. 827
3421350
MDM2
Non-coding (UTR)
chr12
69237819
69237941
+


SEQ ID NO. 828
3421492
CPSF6
Non-coding (UTR)
chr12
69663759
69663896
+


SEQ ID NO. 829
3421652
CCT2
Coding
chr12
69986764
69986823
+


SEQ ID NO. 830
3421668
CCT2
Non-coding (UTR)
chr12
69995199
69995277
+


SEQ ID NO. 831
3427811
TMPO
Non-coding (UTR)
chr12
98944024
98944069
+


SEQ ID NO. 832
3427812
TMPO
Non-coding (UTR)
chr12
98944093
98944124
+


SEQ ID NO. 833
3428711
CHPT1
Non-coding (UTR)
chr12
102122724
102122790
+


SEQ ID NO. 834
3428712
CHPT1
Non-coding (UTR)
chr12
102122801
102122832
+


SEQ ID NO. 835
3429794
KIAA1033
Coding
chr12
105538106
105538233
+


SEQ ID NO. 836
3430575
PWP1
Non-coding (UTR)
chr12
108106058
108106208
+


SEQ ID NO. 837
3431352
TCHP
Non-coding (UTR)
chr12
110355835
110355871
+


SEQ ID NO. 838
3431686
PPP1CC
Non-coding (Exonic
chr12
111157751
111158527
+





Antisense)


SEQ ID NO. 839
3432171
MAPKAPK5
Non-coding (UTR)
chr12
112331155
112331227
+


SEQ ID NO. 840
3432352
PTPN11
Coding
chr12
112915472
112915526
+


SEQ ID NO. 841
3435860
TMED2
Coding
chr12
124074920
124074969
+


SEQ ID NO. 842
3435864
TMED2
Non-coding (UTR)
chr12
124081749
124082527
+


SEQ ID NO. 843
3436017
TCTN2
Non-coding (UTR)
chr12
124192827
124192906
+


SEQ ID NO. 844
3436264
ZNF664
Non-coding (UTR)
chr12
124499930
124499958
+


SEQ ID NO. 845
3438044
RAN
Non-coding (UTR)
chr12
131360699
131360737
+


SEQ ID NO. 846
3445545
PLBD1
Non-coding (UTR)
chr12
14656642
14656700



SEQ ID NO. 847
3445674
WBPI1
Non-coding (UTR)
chr12
14939813
14939844



SEQ ID NO. 848
3445750
MGP
Coding
chr12
15035935
15035980



SEQ ID NO. 849
3446488
RP11-841C19.6
Non-
chr12
19610131
19610161






coding (ncTranscript)


SEQ ID NO. 850
3446869
LDHB
Non-coding (UTR)
chr12
21788309
21788372



SEQ ID NO. 851
3446885
LDHB
Coding
chr12
21796891
21796927



SEQ ID NO. 852
3452256
SLC38A1
Coding
chr12
46594896
46594950



SEQ ID NO. 853
3452262
SLC38A1
Coding
chr12
46598093
46598153



SEQ ID NO. 854
3452324
SLC38A2
Non-coding (UTR)
chr12
46752021
46752132



SEQ ID NO. 855
3452349
SLC38A2
Non-
chr12
46759827
46760034






coding (Intronic)


SEQ ID NO. 856
3454729
DAZAP2
Non-coding (Exonic
chr12
51637043
51637499






Antisense)


SEQ ID NO. 857
3456599
SMUG1
Non-coding (UTR)
chr12
54575266
54575301



SEQ ID NO. 858
3457550
ANKRD52
Non-coding (UTR)
chr12
56631625
56631704



SEQ ID NO. 859
3458494
R3HDM2
Coding
chr12
57690242
57690331



SEQ ID NO. 860
3461302
RAP1B
Non-coding (Exonic
chr12
69054237
69054275






Antisense)


SEQ ID NO. 861
3461431
CPSF6
Non-coding (Intronic
chr12
69660063
69660148






Antisense)


SEQ ID NO. 862
3462710
KRR1
Coding
chr12
75895562
75895592



SEQ ID NO. 863
3462846
NAP1L1
Non-coding (UTR)
chr12
76440105
76440134



SEQ ID NO. 864
3462861
NAP1L1
Coding
chr12
76443241
76443271



SEQ ID NO. 865
3462867
NAP1L1
Coding
chr12
76447550
76447578



SEQ ID NO. 866
3462868
NAP1L1
Coding
chr12
76447613
76447637



SEQ ID NO. 867
3462884
NAP1L1
Coding
chr12
76462692
76462753



SEQ ID NO. 868
3462988
OSBPL8
Coding
chr12
76796488
76796545



SEQ ID NO. 869
3463596
PPP1R12A
Coding
chr12
80189429
80189478



SEQ ID NO. 870
3463603
PPP1R12A
Coding
chr12
80192274
80192363



SEQ ID NO. 871
3464009
CCDC59
Non-coding (UTR)
chr12
82746826
82746850



SEQ ID NO. 872
3465251
LUM
Non-coding (UTR)
chr12
91497423
91497674



SEQ ID NO. 873
3465252
LUM
Non-coding (UTR)
chr12
91497768
91497898



SEQ ID NO. 874
3465278
DCN
Non-coding (UTR)
chr12
91539375
91539470



SEQ ID NO. 875
3466861
CDK17
Coding
chr12
96692676
96692724



SEQ ID NO. 876
3467642
UHRF1BP1L
Non-coding (UTR)
chr12
100430873
100430903



SEQ ID NO. 877
3468015
ARL1
Coding
chr12
101789418
101789448



SEQ ID NO. 878
3469369
APPL2
Coding
chr12
105601936
105601968



SEQ ID NO. 879
3471177
ATP2A2
Non-coding (Exonic
chr12
110760804
110760877






Antisense)


SEQ ID NO. 880
3471377
PPP1CC
Coding
chr12
111157748
111158008



SEQ ID NO. 881
3471379
PPP1CC
Non-coding (UTR)
chr12
111158304
111158805



SEQ ID NO. 882
3472092
RPL6
Coding
chr12
112843756
112843788



SEQ ID NO. 883
3473482
FBXO21
Non-coding (UTR)
chr12
117581623
117581716



SEQ ID NO. 884
3474494
COX6A1
Non-coding (Exonic
chr12
120878384
120878408






Antisense)


SEQ ID NO. 885
3474937
ANAPC5
Non-coding (UTR)
chr12
121746187
121746219



SEQ ID NO. 886
3475623
CLIP1
Coding
chr12
122812874
122812960



SEQ ID NO. 887
3475737
RSRC2
Coding
chr12
123003467
123003552



SEQ ID NO. 888
3476294
RP11-338K17.8
Non-
chr12
124192881
124192911






coding (ncTranscript)


SEQ ID NO. 889
3480098
PSPC1
Non-coding (Intronic
chr13
20288513
20288582
+





Antisense)


SEQ ID NO. 890
3480100
PSPC1
Non-coding (Intronic
chr13
20289439
20289587
+





Antisense)


SEQ ID NO. 891
3480173
ZMYM2
Coding
chr13
20625705
20625738
+


SEQ ID NO. 892
3480201
ZMYM2
Coding
chr13
20660015
20660105
+


SEQ ID NO. 893
3480203
ZMYM2
Non-coding (UTR)
chr13
20660684
20660800
+


SEQ ID NO. 894
3480685
MRP63
Non-coding (UTR)
chr13
21751366
21751479
+


SEQ ID NO. 895
3480856
RP11-149B7.3
Non-
chr13
21949514
21949608
+





coding (Intronic)


SEQ ID NO. 896
3481480
MIPEP
Non-coding (Exonic
chr13
24304376
24304486
+





Antisense)


SEQ ID NO. 897
3482124
PABPC3
Coding
chr13
25671061
25671086
+


SEQ ID NO. 898
3482915
GTF3A
Non-coding (UTR)
chr13
28009740
28009770
+


SEQ ID NO. 899
3482916
GTF3A
Non-coding (UTR)
chr13
28009783
28009821
+


SEQ ID NO. 900
3483215
EEF1A1P3
Non-
chr13
28790004
28790032
+





coding (ncTranscript)


SEQ ID NO. 901
3484743
N4BP2L2
Non-coding (Exonic
chr13
33091777
33091983
+





Antisense)


SEQ ID NO. 902
3484750
N4BP2L2
Non-coding (Intronic
chr13
33100404
33100549
+





Antisense)


SEQ ID NO. 903
3484756
N4BP2L2
Non-coding (Intronic
chr13
33108310
33108639
+





Antisense)


SEQ ID NO. 904
3484762
N4BP2L2
Non-coding (Exonic
chr13
33110810
33111128
+





Antisense)


SEQ ID NO. 905
3485891
EXOSC8
Non-coding (UTR)
chr13
37583482
37583513
+


SEQ ID NO. 906
3489010
ITM2B
Non-coding (UTR)
chr13
48835362
48835441
+


SEQ ID NO. 907
3489011
ITM2B
Non-coding (UTR)
chr13
48835461
48835490
+


SEQ ID NO. 908
3494193
LMO7
Coding
chr13
76378428
76378461
+


SEQ ID NO. 909
3497656
MBNL2
Coding
chr13
98043613
98043670
+


SEQ ID NO. 910
3497658
MBNL2
Non-coding (UTR)
chr13
98046231
98046350
+


SEQ ID NO. 911
3497823
IPO5
Coding
chr13
98658384
98658526
+


SEQ ID NO. 912
3498048
FARP1
Non-coding (UTR)
chr13
99101993
99102022
+


SEQ ID NO. 913
3498445
UBAC2
Non-coding (UTR)
chr13
100038537
100038628
+


SEQ ID NO. 914
3498523
TM9SF2
Coding
chr13
100181729
100181759
+


SEQ ID NO. 915
3498537
TM9SF2
Coding
chr13
100193828
100193859
+


SEQ ID NO. 916
3498977
PCCA
Non-coding (UTR)
chr13
101182613
101182666
+


SEQ ID NO. 917
3499545
TPP2
Coding
chr13
103328647
103328727
+


SEQ ID NO. 918
3500408
ARGLU1
Non-coding (Exonic
chr13
107210889
107211226
+





Antisense)


SEQ ID NO. 919
3501216
COL4A1
Non-coding (Exonic
chr13
110801366
110802521
+





Antisense)


SEQ ID NO. 920
3501217
COL4A1
Non-coding (Exonic
chr13
110802557
110802622
+





Antisense)


SEQ ID NO. 921
3501555
ANKRD10, RP11-
Non-coding (Intronic
chr13
111550126
111550263
+




120J20.2
Antisense)


SEQ ID NO. 922
3503211
CDC16
Non-coding (UTR)
chr13
115038049
115038141
+


SEQ ID NO. 923
3505453
MIPEP
Non-coding (UTR)
chr13
24304376
24304406



SEQ ID NO. 924
3506941
GTF3A
Non-coding (Exonic
chr13
28009271
28009319






Antisense)


SEQ ID NO. 925
3508731
N4BP2L2
Non-coding (UTR)
chr13
33091139
33091739



SEQ ID NO. 926
3508732
N4BP2L2
Non-coding (UTR)
chr13
33091797
33091904



SEQ ID NO. 927
3508761
N4BP2L2
Non-coding (UTR)
chr13
33112755
33112784



SEQ ID NO. 928
3509912
FAM48A
Non-coding (UTR)
chr13
37583472
37583574



SEQ ID NO. 929
3509913
FAM48A
Non-coding (UTR)
chr13
37583672
37583718



SEQ ID NO. 930
3510070
POSTN
Coding
chr13
38137470
38137505



SEQ ID NO. 931
3510382
C13orf23
Coding
chr13
39591637
39591681



SEQ ID NO. 932
3512558
TPT1
Coding
chr13
45914196
45914249



SEQ ID NO. 933
3513710
FNDC3A
Non-coding (Intronic
chr13
49743307
49743495






Antisense)


SEQ ID NO. 934
3517677
KLF5
Non-coding (Intronic
chr13
73639022
73639125






Antisense)


SEQ ID NO. 935
3517683
KLF5
Non-coding (Exonic
chr13
73651458
73651592






Antisense)


SEQ ID NO. 936
3518501
MYCBP2
Non-coding (UTR)
chr13
77618823
77618901



SEQ ID NO. 937
3519136
RBM26
Coding
chr13
79908511
79908559



SEQ ID NO. 938
3521962
MBNL2
Non-coding (Exonic
chr13
98046114
98046289






Antisense)


SEQ ID NO. 939
3524627
ARGLU1
Coding
chr13
107209416
107209478



SEQ ID NO. 940
3524630
ARGLU1
Non-
chr13
107209980
107210978






coding (ncTranscript)


SEQ ID NO. 941
3524631
ARGLU1
Non-
chr13
107211047
107211103






coding (Intronic)


SEQ ID NO. 942
3525314
COL4A1
Non-coding (UTR)
chr13
110801323
110801391



SEQ ID NO. 943
3525317
COL4A1
Non-coding (UTR)
chr13
110802009
110802049



SEQ ID NO. 944
3525320
COL4A1
Non-coding (UTR)
chr13
110802659
110802703



SEQ ID NO. 945
3525547
CARS2
Non-coding (UTR)
chr13
111293770
111293801



SEQ ID NO. 946
3525702
ANKRD10
Coding
chr13
111546459
111546509



SEQ ID NO. 947
3525704
ANKRD10
Non-
chr13
111546562
111546615






coding (Intronic)


SEQ ID NO. 948
3525710
ANKRD10, RP11-
Non-
chr13
111550458
111550798





120J20.2
coding (Intronic)


SEQ ID NO. 949
3526383
PCID2
Non-coding (UTR)
chr13
113832145
113832173



SEQ ID NO. 950
3527530
PNP
Non-coding (UTR)
chr14
20945198
20945234
+


SEQ ID NO. 951
3528208
chr14+: 22219841-22219898
Non-
chr14
22219841
22219898
+





coding (Intergenic)


SEQ ID NO. 952
3529094
PABPN1
Coding
chr14
23793174
23793252
+


SEQ ID NO. 953
3531094
SCFD1
Non-coding (UTR)
chr14
31204908
31204938
+


SEQ ID NO. 954
3531491
ARHGAP5
Non-coding (UTR)
chr14
32559824
32559857
+


SEQ ID NO. 955
3533452
PNN
Coding
chr14
39649881
39650067
+


SEQ ID NO. 956
3534950
KLHDC2
Non-coding (UTR)
chr14
50249686
50249814
+


SEQ ID NO. 957
3535917
PSMC6
Non-coding (UTR)
chr14
53194359
53194390
+


SEQ ID NO. 958
3536669
MAPK11P1L
Non-
chr14
55521391
55521561
+





coding (Intronic)


SEQ ID NO. 959
3536745
LGALS3
Non-coding (UTR)
chr14
55612028
55612094
+


SEQ ID NO. 960
3536931
KTN1
Coding
chr14
56079043
56079161
+


SEQ ID NO. 961
3536934
KTN1
Coding
chr14
56084718
56084852
+


SEQ ID NO. 962
3536938
KTN1
Coding
chr14
56094637
56094745
+


SEQ ID NO. 963
3536943
KTN1
Coding
chr14
56103204
56103241
+


SEQ ID NO. 964
3536948
KTN1
Coding
chr14
56107121
56107158
+


SEQ ID NO. 965
3536949
KTN1
Coding
chr14
56107654
56107685
+


SEQ ID NO. 966
3536951
KTN1
Coding
chr14
56108443
56108473
+


SEQ ID NO. 967
3536992
KTN1
Coding
chr14
56138319
56138348
+


SEQ ID NO. 968
3536994
KTN1
Coding
chr14
56138552
56138592
+


SEQ ID NO. 969
3537787
PSMA3
Non-
chr14
58736530
58737088
+





coding (Intronic)


SEQ ID NO. 970
3537795
PSMA3
Non-coding (UTR)
chr14
58738645
58738676
+


SEQ ID NO. 971
3537796
PSMA3
Non-coding (UTR)
chr14
58738678
58738711
+


SEQ ID NO. 972
3539104
HIF1A
Non-coding (UTR)
chr14
62213835
62214927
+


SEQ ID NO. 973
3539877
SYNE2
Coding
chr14
64608087
64608217
+


SEQ ID NO. 974
3543929
ZNF410
Non-coding (UTR)
chr14
74398925
74398960
+


SEQ ID NO. 975
3544473
TMED10
Non-coding (Exonic
chr14
75600819
75601043
+





Antisense)


SEQ ID NO. 976
3544890
C14orf179
Non-coding (UTR)
chr14
76549980
76550008
+


SEQ ID NO. 977
3545534
C14orf156
Coding
chr14
78183857
78183893
+


SEQ ID NO. 978
3549043
GOLGA5
Coding
chr14
93273192
93273296
+


SEQ ID NO. 979
3550451
PAPOLA
Non-coding (UTR)
chr14
97031464
97031570
+


SEQ ID NO. 980
3550453
PAPOLA
Non-coding (UTR)
chr14
97032230
97033320
+


SEQ ID NO. 981
3550455
PAPOLA
Non-coding (UTR)
chr14
97033359
97033402
+


SEQ ID NO. 982
3552937
DYNC1H1
Coding
chr14
102500662
102500721
+


SEQ ID NO. 983
3552938
DYNC1H1
Coding
chr14
102500737
102500788
+


SEQ ID NO. 984
3556198
HNRNPC
Non-
chr14
21711637
21711681






coding (Intronic)


SEQ ID NO. 985
3556224
HNRNPC
Non-
chr14
21715371
21715455






coding (Intronic)


SEQ ID NO. 986
3556278
HNRNPC
Non-
chr14
21724188
21724274






coding (Intronic)


SEQ ID NO. 987
3556420
METTL3
Non-coding (UTR)
chr14
21966312
21966385



SEQ ID NO. 988
3558292
SDR39U1
Non-coding (UTR)
chr14
24909005
24909035



SEQ ID NO. 989
3559519
STRN3
Coding
chr14
31388179
31388221



SEQ ID NO. 990
3559556
STRN3
Non-
chr14
31494313
31494364






coding (Intronic)


SEQ ID NO. 991
3562436
chr14−: 43624685-43624788
Non-
chr14
43624685
43624788






coding (Intergenic)


SEQ ID NO. 992
3563349
KLHDC2
Non-coding (Exonic
chr14
50249079
50249817






Antisense)


SEQ ID NO. 993
3563970
MAP4K5
Coding
chr14
50930810
50930847



SEQ ID NO. 994
3566596
C14orf37
Non-
chr14
58732098
58732170






coding (Intronic)


SEQ ID NO. 995
3566603
C14orf37
Non-
chr14
58738232
58738695






coding (Intronic)


SEQ ID NO. 996
3566648
C14orf37
Non-
chr14
58745642
58745917






coding (Intronic)


SEQ ID NO. 997
3566657
TIMM9
Non-coding (UTR)
chr14
58875404
58875448



SEQ ID NO. 998
3566993
JKAMP
Non-coding (Exonic
chr14
59971339
59971383






Antisense)


SEQ ID NO. 999
3569346
PIGH
Non-coding (UTR)
chr14
68056048
68056249



SEQ ID NO. 1000
3569757
ZFP36L1
Non-coding (UTR)
chr14
69254887
69255185



SEQ ID NO. 1001
3569759
ZFP36L1
Non-coding (UTR)
chr14
69255920
69256161



SEQ ID NO. 1002
3569819
ACTN1
Non-coding (UTR)
chr14
69341254
69341307



SEQ ID NO. 1003
3570456
COX16
Non-coding (UTR)
chr14
70792813
70792939



SEQ ID NO. 1004
3573155
SPTLC2
Non-coding (UTR)
chr14
77978379
77978415



SEQ ID NO. 1005
3576551
SMEK1
Non-coding (UTR)
chr14
91924009
91924055



SEQ ID NO. 1006
3576567
SMEK1
Coding
chr14
91929149
91929176



SEQ ID NO. 1007
3576712
TC2N
Non-coding (UTR)
chr14
92248983
92249066



SEQ ID NO. 1008
3576730
TC2N
Coding
chr14
92278706
92278866



SEQ ID NO. 1009
3576939
NDUFB1
Non-coding (UTR)
chr14
92582506
92582534



SEQ ID NO. 1010
3576940
NDUFB1
Coding
chr14
92582542
92582573



SEQ ID NO. 1011
3577874
DICER1
Non-coding (UTR)
chr14
95556680
95556725



SEQ ID NO. 1012
3577898
DICER1
Coding
chr14
95573945
95574043



SEQ ID NO. 1013
3577911
DICER1
Coding
chr14
95583981
95584063



SEQ ID NO. 1014
3578431
PAPOLA
Non-coding (Exonic
chr14
97032931
97033315






Antisense)


SEQ ID NO. 1015
3580188
HSP90AA1
Coding
chr14
102549575
102549608



SEQ ID NO. 1016
3580204
HSP90AA1
Coding
chr14
102552344
102552461



SEQ ID NO. 1017
3580587
CDC42BPB
Coding
chr14
103478471
103478503



SEQ ID NO. 1018
3580953
C14orf2
Non-coding (UTR)
chr14
104378874
104378902



SEQ ID NO. 1019
3589660
SRP14
Non-coding (Exonic
chr15
40327993
40328048
+





Antisense)


SEQ ID NO. 1020
3590159
ZFYVE19
Non-coding (UTR)
chr15
41106724
41106757
+


SEQ ID NO. 1021
3590352
AC012652.1
Coding
chr15
41554969
41555013
+


SEQ ID NO. 1022
3591851
CASC4
Coding
chr15
44615169
44615209
+


SEQ ID NO. 1023
3591858
CASC4
Coding
chr15
44624186
44624269
+


SEQ ID NO. 1024
3591985
EIF3J
Non-coding (UTR)
chr15
44853865
44853895
+


SEQ ID NO. 1025
3592046
B2M
Non-coding (UTR)
chr15
45010076
45010140
+


SEQ ID NO. 1026
3592047
B2M
Non-coding (UTR)
chr15
45010149
45010306
+


SEQ ID NO. 1027
3592395
SPATA5L1
Non-coding (UTR)
chr15
45713540
45713570
+


SEQ ID NO. 1028
3593171
DUT
Non-coding (UTR)
chr15
48634495
48634524
+


SEQ ID NO. 1029
3594101
TMOD3
Non-coding (UTR)
chr15
52203518
52204078
+


SEQ ID NO. 1030
3595811
ADAM10
Non-coding (Exonic
chr15
58936101
58936173
+





Antisense)


SEQ ID NO. 1031
3595872
FAM63B
Coding
chr15
59146705
59146747
+


SEQ ID NO. 1032
3596235
RPS3AP6
Non-
chr15
60061048
60061073
+





coding (ncTranscript)


SEQ ID NO. 1033
3597406
TPM1
Coding
chr15
63363335
63363371
+


SEQ ID NO. 1034
3597468
RPS27L
Non-coding (Exonic
chr15
63448685
63448718
+





Antisense)


SEQ ID NO. 1035
3597671
USP3
Non-
chr15
63863224
63863330
+





coding (Intronic)


SEQ ID NO. 1036
3598717
RPL4
Non-coding (Exonic
chr15
66792495
66792526
+





Antisense)


SEQ ID NO. 1037
3599449
FEM1B
Non-coding (UTR)
chr15
68588065
68588154
+


SEQ ID NO. 1038
3602509
UBE2Q2
Coding
chr15
76165783
76165852
+


SEQ ID NO. 1039
3605249
BTBD1
Non-coding (Exonic
chr15
83685253
83685989
+





Antisense)


SEQ ID NO. 1040
3606117
PDE8A
Coding
chr15
85660888
85661024
+


SEQ ID NO. 1041
3606409
AKAP13
Coding
chr15
86228040
86228071
+


SEQ ID NO. 1042
3608201
IQGAP1
Non-coding (UTR)
chr15
91043485
91044457
+


SEQ ID NO. 1043
3609166
chr15+: 93441269-93441296
Non-
chr15
93441269
93441296
+





coding (Intergenic)


SEQ ID NO. 1044
3615597
TJP1
Coding
chr15
29993813
29993887



SEQ ID NO. 1045
3615604
TJP1
Coding
chr15
30000769
30001056



SEQ ID NO. 1046
3615659
TJP1
Coding
chr15
30064323
30064365



SEQ ID NO. 1047
3615989
MTMR10
Non-coding (UTR)
chr15
31231241
31231375



SEQ ID NO. 1048
3621014
RP11-473C18.1
Non-
chr15
43408169
43408193






coding (ncTranscript)


SEQ ID NO. 1049
3623329
SECISBP2L
Non-coding (UTR)
chr15
49280903
49280978



SEQ ID NO. 1050
3624199
DMXL2
Coding
chr15
51828398
51828822



SEQ ID NO. 1051
3624533
MYO5C
Coding
chr15
52511971
52512014



SEQ ID NO. 1052
3624702
ARPP19
Non-coding (UTR)
chr15
52842989
52843020



SEQ ID NO. 1053
3625565
NEDD4
Coding
chr15
56144633
56144664



SEQ ID NO. 1054
3626570
ADAM10
Coding
chr15
58889656
58889693



SEQ ID NO. 1055
3626585
ADAM10
Coding
chr15
58913702
58913746



SEQ ID NO. 1056
3626730
SLTM
Coding
chr15
59186138
59186165



SEQ ID NO. 1057
3627045
GTF2A2
Non-coding (UTR)
chr15
59931155
59931320



SEQ ID NO. 1058
3628011
VPS13C
Coding
chr15
62223290
62223365



SEQ ID NO. 1059
3628052
VPS13C
Coding
chr15
62277071
62277198



SEQ ID NO. 1060
3628057
VPS13C
Coding
chr15
62299573
62299653



SEQ ID NO. 1061
3628471
RPS27L
Non-coding (UTR)
chr15
63446088
63446161



SEQ ID NO. 1062
3628924
FAM96A
Non-coding (UTR)
chr15
64364822
64365114



SEQ ID NO. 1063
3630191
RPL4
Coding
chr15
66793304
66793342



SEQ ID NO. 1064
3631414
UACA
Coding
chr15
70963386
70963413



SEQ ID NO. 1065
3632170
HEXA
Non-coding (UTR)
chr15
72636242
72636274



SEQ ID NO. 1066
3633110
ULK3
Non-coding (UTR)
chr15
75128476
75128503



SEQ ID NO. 1067
3633223
COX5A
Non-coding (UTR)
chr15
75212727
75212760



SEQ ID NO. 1068
3633226
COX5A
Coding
chr15
75219110
75219150



SEQ ID NO. 1069
3634074
TSPAN3
Non-coding (UTR)
chr15
77338406
77338505



SEQ ID NO. 1070
3643958
IFT140
Non-coding (Intronic
chr16
1605465
1605543
+





Antisense)


SEQ ID NO. 1071
3645267
SRRM2
Coding
chr16
2809141
2809173
+


SEQ ID NO. 1072
3645314
SRRM2
Coding
chr16
2821320
2821352
+


SEQ ID NO. 1073
3645591
AC108134.1
Non-coding (UTR)
chr16
3082688
3082721
+


SEQ ID NO. 1074
3647535
PMM2
Non-coding (UTR)
chr16
8943097
8943149
+


SEQ ID NO. 1075
3648373
GSPT1
Non-coding (Exonic
chr16
11965914
11966088
+





Antisense)


SEQ ID NO. 1076
3651472
THUMPD1
Non-coding (Exonic
chr16
20745035
20745197
+





Antisense)


SEQ ID NO. 1077
3653349
RBBP6
Coding
chr16
24572962
24573036
+


SEQ ID NO. 1078
3653673
LCMT1
Non-coding (UTR)
chr16
25189503
25189534
+


SEQ ID NO. 1079
3655101
ATP2A1
Coding
chr16
28915742
28915771
+


SEQ ID NO. 1080
3658610
chr16+: 34329397-34329426
Non-
chr16
34329397
34329426
+





coding (Intergenic)


SEQ ID NO. 1081
3659201
PHKB
Coding
chr16
47674954
47674997
+


SEQ ID NO. 1082
3659319
LONP2
Coding
chr16
48295347
48295482
+


SEQ ID NO. 1083
3660917
CHD9
Coding
chr16
53256556
53256653
+


SEQ ID NO. 1084
3660927
CHD9
Coding
chr16
53269097
53269212
+


SEQ ID NO. 1085
3665635
CTCF
Non-coding (UTR)
chr16
67673041
67673073
+


SEQ ID NO. 1086
3666111
NFATC3
Non-coding (UTR)
chr16
68262372
68262449
+


SEQ ID NO. 1087
3666869
NFAT5
Non-coding (UTR)
chr16
69738402
69738519
+


SEQ ID NO. 1088
3668992
CFDP1
Non-coding (Exonic
chr16
75445798
75445831
+





Antisense)


SEQ ID NO. 1089
3671113
HSD17B2
Non-coding (UTR)
chr16
82132049
82132091
+


SEQ ID NO. 1090
3677863
CREBBP
Coding
chr16
3832776
3832921



SEQ ID NO. 1091
3679601
USP7
Coding
chr16
9002201
9002297



SEQ ID NO. 1092
3683054
SMG1
Non-coding (UTR)
chr16
18816225
18816252



SEQ ID NO. 1093
3685080
USP31
Coding
chr16
23113641
23113757



SEQ ID NO. 1094
3687262
CDIPT
Non-coding (UTR)
chr16
29869699
29869726



SEQ ID NO. 1095
3687792
DCTPP1
Non-coding (UTR)
chr16
30435055
30435119



SEQ ID NO. 1096
3690089
DNAJA2
Non-coding (UTR)
chr16
46990519
46990548



SEQ ID NO. 1097
3692857
AMFR
Non-coding (UTR)
chr16
56395400
56395436



SEQ ID NO. 1098
3693546
CSNK2A2
Non-
chr16
58197918
58197957






coding (Intronic)


SEQ ID NO. 1099
3693711
CNOT1
Coding
chr16
58580290
58580397



SEQ ID NO. 1100
3693737
CNOT1
Coding
chr16
58612675
58612766



SEQ ID NO. 1101
3693746
CNOT1
Coding
chr16
58621684
58621741



SEQ ID NO. 1102
3696670
NFAT5
Non-coding (Exonic
chr16
69735142
69735208






Antisense)


SEQ ID NO. 1103
3697925
KIAA0174
Non-coding (Intronic
chr16
71956876
71957154






Antisense)


SEQ ID NO. 1104
3699559
CFDP1
Coding
chr16
75445743
75445831



SEQ ID NO. 1105
3701588
chr16−: 81422942-81422986
Non-
chr16
81422942
81422986






coding (Intergenic)


SEQ ID NO. 1106
3705531
GLOD4
Non-coding (Exonic
chr17
662604
662642
+





Antisense)


SEQ ID NO. 1107
3707211
PSMB6
Non-coding (UTR)
chr17
4701718
4701745
+


SEQ ID NO. 1108
3708006
TXNDC17
Non-coding (UTR)
chr17
6546346
6546406
+


SEQ ID NO. 1109
3709275
CHD3
Coding
chr17
7801317
7801402
+


SEQ ID NO. 1110
3710735
MAP2K4
Non-coding (UTR)
chr17
12044587
12044730
+


SEQ ID NO. 1111
3714102
ALDH3A2
Non-coding (UTR)
chr17
19578985
19579015
+


SEQ ID NO. 1112
3715142
WSB1
Non-coding (UTR)
chr17
25639650
25640711
+


SEQ ID NO. 1113
3715434
NLK
Non-coding (UTR)
chr17
26523346
26523402
+


SEQ ID NO. 1114
3716021
NUFIP2
Non-coding (Exonic
chr17
27584395
27585068
+





Antisense)


SEQ ID NO. 1115
3716674
SUZ12P
Non-
chr17
29061929
29061961
+





coding (ncTranscript)


SEQ ID NO. 1116
3716757
CRLF3
Non-coding (Exonic
chr17
29109181
29110227
+





Antisense)


SEQ ID NO. 1117
3717647
ZNF207
Coding
chr17
30688498
30688534
+


SEQ ID NO. 1118
3717681
ZNF207
Non-coding (UTR)
chr17
30703222
30704388
+


SEQ ID NO. 1119
3717684
ZNF207
Non-coding (UTR)
chr17
30707067
30707332
+


SEQ ID NO. 1120
3718837
TAF15
Non-coding (UTR)
chr17
34174149
34174181
+


SEQ ID NO. 1121
3719123
ZNHIT3
Non-coding (UTR)
chr17
34851541
34851568
+


SEQ ID NO. 1122
3720778
MSL1
Non-coding (UTR)
chr17
38292930
38292996
+


SEQ ID NO. 1123
3720990
TOP2A
Non-coding (Exonic
chr17
38551732
38551789
+





Antisense)


SEQ ID NO. 1124
3722990
GPATCH8
Non-coding (Exonic
chr17
42544382
42544480
+





Antisense)


SEQ ID NO. 1125
3723305
NMT1
Non-coding (UTR)
chr17
43183284
43183313
+


SEQ ID NO. 1126
3726811
LUC7L3
Non-coding (UTR)
chr17
48829837
48829910
+


SEQ ID NO. 1127
3728316
chr17+: 55758561-55758676
Non-
chr17
55758561
55758676
+





coding (Intergenic)


SEQ ID NO. 1128
3729194
CLTC
Coding
chr17
57743467
57743600
+


SEQ ID NO. 1129
3729227
CLTC
Non-coding (UTR)
chr17
57771220
57771523
+


SEQ ID NO. 1130
3732475
BPTF
Coding
chr17
65905772
65905867
+


SEQ ID NO. 1131
3732477
BPTF
Coding
chr17
65906998
65907253
+


SEQ ID NO. 1132
3732479
BPTF
Coding
chr17
65908073
65908103
+


SEQ ID NO. 1133
3732480
BPTF
Coding
chr17
65908105
65908152
+


SEQ ID NO. 1134
3734754
NUP85
Non-coding (UTR)
chr17
73231775
73231813
+


SEQ ID NO. 1135
3734863
KIAA0195
Non-coding (UTR)
chr17
73496070
73496097
+


SEQ ID NO. 1136
3737304
RNF213
Coding
chr17
78286838
78286959
+


SEQ ID NO. 1137
3737985
ACTG1
Non-coding (Exonic
chr17
79477609
79477714
+





Antisense)


SEQ ID NO. 1138
3738300
ANAPC11
Non-coding (UTR)
chr17
79858058
79858126
+


SEQ ID NO. 1139
3739125
FN3KRP
Non-coding (UTR)
chr17
80685795
80685853
+


SEQ ID NO. 1140
3739523
RPH3AL
Non-coding (UTR)
chr17
62308
62338



SEQ ID NO. 1141
3740129
YWHAE
Non-coding (UTR)
chr17
1247864
1247932



SEQ ID NO. 1142
3740130
YWHAE
Non-coding (UTR)
chr17
1247937
1247962



SEQ ID NO. 1143
3744423
RPL26
Coding
chr17
8280885
8280918



SEQ ID NO. 1144
3746953
NCOR1
Coding
chr17
16041478
16041507



SEQ ID NO. 1145
3746967
NCOR1
Coding
chr17
16055260
16055312



SEQ ID NO. 1146
3747223
UBB, AC093484.6
Non-coding (Exonic
chr17
16285909
16285939






Antisense)


SEQ ID NO. 1147
3748953
ALDH3A2
Non-coding (Exonic
chr17
19578961
19579027






Antisense)


SEQ ID NO. 1148
3750786
SPAG5
Non-coding (UTR)
chr17
26904610
26904639



SEQ ID NO. 1149
3752711
MYO1D
Non-coding (UTR)
chr17
30819629
30819657



SEQ ID NO. 1150
3754530
ACACA
Coding
chr17
35538144
35538267



SEQ ID NO. 1151
3754741
DDX52
Non-coding (UTR)
chr17
35974190
35974305



SEQ ID NO. 1152
3756204
TOP2A
Coding
chr17
38552572
38552698



SEQ ID NO. 1153
3759590
PLCD3
Non-coding (UTR)
chr17
43189041
43189118



SEQ ID NO. 1154
3760197
KIAA1267
Non-
chr17
44229099
44229138






coding (Intronic)


SEQ ID NO. 1155
3761752
ZNF652
Non-
chr17
47371242
47371658






coding (Intronic)


SEQ ID NO. 1156
3762575
SPAG9
Coding
chr17
49098531
49098605



SEQ ID NO. 1157
3764121
SRSF1
Non-coding (UTR)
chr17
56080881
56081053



SEQ ID NO. 1158
3764125
SRSF1
Non-coding (UTR)
chr17
56082334
56082402



SEQ ID NO. 1159
3764127
SRSF1
Non-coding (UTR)
chr17
56082659
56082766



SEQ ID NO. 1160
3764884
PTRH2
Non-coding (UTR)
chr17
57774692
57774781



SEQ ID NO. 1161
3764921
TMEM49
Non-coding (Intronic
chr17
57916786
57917067






Antisense)


SEQ ID NO. 1162
3765738
MED13
Coding
chr17
60072562
60072692



SEQ ID NO. 1163
3765761
MED13
Coding
chr17
60112841
60112917



SEQ ID NO. 1164
3765767
MED13
Coding
chr17
60129924
60130040



SEQ ID NO. 1165
3766896
DDX5
Coding
chr17
62496067
62496341



SEQ ID NO. 1166
3768039
HELZ
Coding
chr17
65110458
65110513



SEQ ID NO. 1167
3768121
PSMD12
Coding
chr17
65343474
65343574



SEQ ID NO. 1168
3768258
BPTF
Non-coding (Exonic
chr17
65900527
65900955






Antisense)


SEQ ID NO. 1169
3769780
SLC39A11
Non-coding (UTR)
chr17
70642090
70642140



SEQ ID NO. 1170
3770244
RPL38
Non-coding (Exonic
chr17
72205375
72205399






Antisense)


SEQ ID NO. 1171
3770564
ATP5H
Non-coding (UTR)
chr17
73034985
73035011



SEQ ID NO. 1172
3770565
ATP5H
Coding
chr17
73035028
73035125



SEQ ID NO. 1173
3770746
AC011933.1, GRB2
Non-coding (UTR)
chr17
73314175
73314221



SEQ ID NO. 1174
3771039
WBP2
Non-coding (UTR)
chr17
73841911
73841967



SEQ ID NO. 1175
3771094
TRIM65
Non-coding (UTR)
chr17
73885066
73885127



SEQ ID NO. 1176
3771337
EXOC7
Non-coding (UTR)
chr17
74077120
74077149



SEQ ID NO. 1177
3776189
SMCHD1
Coding
chr18
2694604
2694691
+


SEQ ID NO. 1178
3776219
SMCHD1
Coding
chr18
2729285
2729399
+


SEQ ID NO. 1179
3776236
SMCHD1
Coding
chr18
2760668
2760737
+


SEQ ID NO. 1180
3776446
MYL12A
Non-coding (UTR)
chr18
3256140
3256174
+


SEQ ID NO. 1181
3776461
MYL12B
Non-coding (UTR)
chr18
3277954
3277997
+


SEQ ID NO. 1182
3778266
ANKRD12
Coding
chr18
9208709
9208785
+


SEQ ID NO. 1183
3778629
VAPA
Non-coding (UTR)
chr18
9954382
9954461
+


SEQ ID NO. 1184
3778630
VAPA
Non-coding (UTR)
chr18
9954599
9954786
+


SEQ ID NO. 1185
3779850
CEP192
Coding
chr18
13042229
13042330
+


SEQ ID NO. 1186
3781686
RIOK3
Coding
chr18
21043933
21043978
+


SEQ ID NO. 1187
3781689
RIOK3
Coding
chr18
21044236
21044277
+


SEQ ID NO. 1188
3783364
DSC2
Non-coding (Exonic
chr18
28645981
28646054
+





Antisense)


SEQ ID NO. 1189
3787934
ACAA2
Non-coding (Exonic
chr18
47309906
47309967
+





Antisense)


SEQ ID NO. 1190
3789817
NARS
Non-coding (Exonic
chr18
55267984
55268652
+





Antisense)


SEQ ID NO. 1191
3795442
HSBP1L1
Non-
chr18
77726702
77726744
+





coding (Intronic)


SEQ ID NO. 1192
3796554
MYL12A
Non-coding (Exonic
chr18
3253291
3253318






Antisense)


SEQ ID NO. 1193
3798470
VAPA
Non-coding (Exonic
chr18
9954382
9954673






Antisense)


SEQ ID NO. 1194
3800623
ROCK1
Non-coding (UTR)
chr18
18529985
18530009



SEQ ID NO. 1195
3804170
RPRD1A
Coding
chr18
33605587
33605638



SEQ ID NO. 1196
3804202
SLC39A6
Non-coding (UTR)
chr18
33689334
33689516



SEQ ID NO. 1197
3806255
ATP5A1
Non-coding (UTR)
chr18
43664158
43664210



SEQ ID NO. 1198
3806256
ATP5A1
Coding
chr18
43664262
43664314



SEQ ID NO. 1199
3807476
C18orf32
Non-coding (UTR)
chr18
47008582
47008661



SEQ ID NO. 1200
3807570
ACAA2
Non-coding (UTR)
chr18
47310009
47310100



SEQ ID NO. 1201
3807629
MYO5B
Coding
chr18
47405315
47405362



SEQ ID NO. 1202
3808602
MBD2
Non-coding (UTR)
chr18
51681249
51681283



SEQ ID NO. 1203
3809343
TXNL1
Non-coding (UTR)
chr18
54270079
54270117



SEQ ID NO. 1204
3809673
NARS
Non-coding (UTR)
chr18
55267919
55268047



SEQ ID NO. 1205
3809834
ATP8B1
Coding
chr18
55319275
55319401



SEQ ID NO. 1206
3813298
CYB5A
Non-coding (UTR)
chr18
71920626
71920814



SEQ ID NO. 1207
3813299
CYB5A
Coding
chr18
71920819
71920861



SEQ ID NO. 1208
3815669
CIRBP
Non-coding (UTR)
chr19
1273068
1273101
+


SEQ ID NO. 1209
3816402
OAZ1
Non-coding (UTR)
chr19
2273334
2273365
+


SEQ ID NO. 1210
3820658
SLC44A2
Non-coding (UTR)
chr19
10755194
10755225
+


SEQ ID NO. 1211
3820705
ILF3
Non-coding (UTR)
chr19
10796289
10796443
+


SEQ ID NO. 1212
3820721
ILF3
Non-coding (UTR)
chr19
10803046
10803074
+


SEQ ID NO. 1213
3820752
QTRT1
Non-coding (UTR)
chr19
10823990
10824021
+


SEQ ID NO. 1214
3822055
CALR
Coding
chr19
13050910
13050952
+


SEQ ID NO. 1215
3825428
UPF1
Non-coding (UTR)
chr19
18978996
18979030
+


SEQ ID NO. 1216
3829039
PDCD5
Coding
chr19
33078171
33078199
+


SEQ ID NO. 1217
3829810
UBA2
Non-coding (UTR)
chr19
34960742
34960773
+


SEQ ID NO. 1218
3831128
WDR62
Non-coding (UTR)
chr19
36595963
36596001
+


SEQ ID NO. 1219
3831280
ZNF146
Non-coding (UTR)
chr19
36729581
36729635
+


SEQ ID NO. 1220
3835412
AC084219.1
Non-coding (Intronic
chr19
44593725
44593755
+





Antisense)


SEQ ID NO. 1221
3837493
GLTSCR2
Coding
chr19
48259945
48259974
+


SEQ ID NO. 1222
3838612
RPS11
Coding
chr19
50000777
50000849
+


SEQ ID NO. 1223
3838790
SCAF1
Coding
chr19
50161065
50161099
+


SEQ ID NO. 1224
3840344
ZNF808
Coding
chr19
53056690
53056733
+


SEQ ID NO. 1225
3841271
CNOT3
Coding
chr19
54647403
54647485
+


SEQ ID NO. 1226
3843668
ZNF587
Non-coding (UTR)
chr19
58375789
58375813
+


SEQ ID NO. 1227
3845710
AP3D1
Non-coding (UTR)
chr19
2100996
2101030



SEQ ID NO. 1228
3846115
AES
Non-coding (UTR)
chr19
3052943
3053123



SEQ ID NO. 1229
3846291
C19orf29
Coding
chr19
3610671
3610894



SEQ ID NO. 1230
3846561
EEF2
Coding
chr19
3981383
3981450



SEQ ID NO. 1231
3846784
UBXN6
Non-coding (UTR)
chr19
4445025
4445062



SEQ ID NO. 1232
3847357
LONP1
Non-coding (UTR)
chr19
5691860
5691889



SEQ ID NO. 1233
3849774
chr19−: 9671051-9671089
Non-
chr19
9671051
9671089






coding (Intergenic)


SEQ ID NO. 1234
3849776
chr19−: 9671562-9671894
Non-
chr19
9671562
9671894






coding (Intergenic)


SEQ ID NO. 1235
3850502
AC011475.2
Non-coding (UTR)
chr19
10762558
10762816



SEQ ID NO. 1236
3851604
DHPS
Non-coding (UTR)
chr19
12786536
12786648



SEQ ID NO. 1237
3851902
CALR
Non-coding (Exonic
chr19
13050901
13050963






Antisense)


SEQ ID NO. 1238
3854371
MRPL34
Non-coding (Exonic
chr19
17417528
17417592






Antisense)


SEQ ID NO. 1239
3855101
C19orf50
Non-coding (Exonic
chr19
18680064
18680145






Antisense)


SEQ ID NO. 1240
3856046
chr19−: 19900909-19901230
Non-
chr19
19900909
19901230






coding (Intergenic)


SEQ ID NO. 1241
3857120
ZNF91
Coding
chr19
23545201
23545314



SEQ ID NO. 1242
3857884
CTC-448F2.1
Non-
chr19
30447703
30447769






coding (ncTranscript)


SEQ ID NO. 1243
3862168
FBL
Non-coding (UTR)
chr19
40325111
40325177



SEQ ID NO. 1244
3862473
AKT2
Non-coding (UTR)
chr19
40737024
40737088



SEQ ID NO. 1245
3867099
KDELR1
Coding
chr19
48887509
48887616



SEQ ID NO. 1246
3869659
ZNF83
Coding
chr19
53117048
53117096



SEQ ID NO. 1247
3869971
ZNF320
Non-
chr19
53428386
53428415






coding (Intronic)


SEQ ID NO. 1248
3870593
TSEN34
Non-coding (Exonic
chr19
54697315
54697498






Antisense)


SEQ ID NO. 1249
3872197
chr19−: 57806251-57806283
Non-
chr19
57806251
57806283






coding (Intergenic)


SEQ ID NO. 1250
3872208
chr19−: 57815574-57815765
Non-
chr19
57815574
57815765






coding (Intergenic)


SEQ ID NO. 1251
3874114
PTPRA
Coding
chr20
2967446
2967484
+


SEQ ID NO. 1252
3874280
ITPA
Non-coding (UTR)
chr20
3204423
3204497
+


SEQ ID NO. 1253
3875278
CRLS1
Non-coding (UTR)
chr20
6018636
6018682
+


SEQ ID NO. 1254
3878051
DSTN
Non-coding (UTR)
chr20
17587973
17588000
+


SEQ ID NO. 1255
3878053
DSTN
Non-coding (UTR)
chr20
17588715
17588815
+


SEQ ID NO. 1256
3879490
XRN2
Coding
chr20
21314576
21314607
+


SEQ ID NO. 1257
3881731
TM9SF4
Non-coding (UTR)
chr20
30755023
30755057
+


SEQ ID NO. 1258
3881914
ASXL1
Coding
chr20
31025076
31025127
+


SEQ ID NO. 1259
3882710
CHMP4B
Non-coding (UTR)
chr20
32442082
32442156
+


SEQ ID NO. 1260
3882867
ITCH
Coding
chr20
32996498
32996582
+


SEQ ID NO. 1261
3883424
ERGIC3
Coding
chr20
34144991
34145020
+


SEQ ID NO. 1262
3883533
RBM39
Non-coding (Exonic
chr20
34326915
34327120
+





Antisense)


SEQ ID NO. 1263
3883537
RBM39
Non-coding (Exonic
chr20
34328294
34328562
+





Antisense)


SEQ ID NO. 1264
3883987
C20orf24
Non-coding (UTR)
chr20
35240820
35240910
+


SEQ ID NO. 1265
3884147
RPN2
Non-coding (UTR)
chr20
35869831
35869970
+


SEQ ID NO. 1266
3884334
CTNNBL1
Non-
chr20
36345727
36345755
+





coding (Intronic)


SEQ ID NO. 1267
3884673
RALGAPB
Coding
chr20
37153421
37153451
+


SEQ ID NO. 1268
3884709
RALGAPB
Non-
chr20
37196054
37196487
+





coding (Intronic)


SEQ ID NO. 1269
3885711
LPIN3
Non-coding (UTR)
chr20
39989186
39989218
+


SEQ ID NO. 1270
3886656
YWHAB
Non-coding (UTR)
chr20
43535667
43535846
+


SEQ ID NO. 1271
3886907
PIGT
Coding
chr20
44049169
44049270
+


SEQ ID NO. 1272
3887661
NCOA3
Coding
chr20
46251022
46251063
+


SEQ ID NO. 1273
3888081
ARFGEF2
Coding
chr20
47587735
47587844
+


SEQ ID NO. 1274
3888182
CSE1L
Non-coding (UTR)
chr20
47713056
47713100
+


SEQ ID NO. 1275
3888253
DDX27
Non-coding (UTR)
chr20
47860499
47860571
+


SEQ ID NO. 1276
3888289
NCRNA00275
Non-
chr20
47905708
47905750
+





coding (ncTranscript)


SEQ ID NO. 1277
3888494
RNF114
Coding
chr20
48568679
48568737
+


SEQ ID NO. 1278
3888936
DPM1
Non-coding (Exonic
chr20
49551434
49551628
+





Antisense)


SEQ ID NO. 1279
3889140
ATP9A
Non-coding (Exonic
chr20
50213352
50214559
+





Antisense)


SEQ ID NO. 1280
3889782
PFDN4
Non-coding (UTR)
chr20
52835863
52835936
+


SEQ ID NO. 1281
3891221
GNAS
Coding
chr20
57470705
57470737
+


SEQ ID NO. 1282
3891257
GNAS
Non-coding (UTR)
chr20
57485961
57486084
+


SEQ ID NO. 1283
3892672
RPS21
Coding
chr20
60962934
60962970
+


SEQ ID NO. 1284
3894074
PCMTD2
Non-coding (UTR)
chr20
62907409
62907536
+


SEQ ID NO. 1285
3894508
RP4-
Non-coding (Exonic
chr20
1147867
1148150





545L17.7, PSMF1
Antisense)


SEQ ID NO. 1286
3894602
FKBP1A
Non-coding (UTR)
chr20
1349656
1349683



SEQ ID NO. 1287
3895000
SNRPB
Non-coding (UTR)
chr20
2442340
2442373



SEQ ID NO. 1288
3896202
PCNA
Non-coding (UTR)
chr20
5095649
5095739



SEQ ID NO. 1289
3898306
SEL1L2
Non-
chr20
13908674
13908801






coding (ncTranscript)


SEQ ID NO. 1290
3901666
C20orf3
Non-coding (UTR)
chr20
24943603
24943644



SEQ ID NO. 1291
3902984
CDK5RAP1
Non-coding (UTR)
chr20
31946673
31946723



SEQ ID NO. 1292
3903290
EIF2S2
Non-coding (UTR)
chr20
32677392
32677416



SEQ ID NO. 1293
3904028
chr20−: 34146096-34146124
Non-
chr20
34146096
34146124






coding (Intergenic)


SEQ ID NO. 1294
3904029
FER1L4, AL389875.1
Non-coding (UTR)
chr20
34146544
34146635



SEQ ID NO. 1295
3904255
RBM39
Coding
chr20
34317239
34317283



SEQ ID NO. 1296
3904257
RBM39
Coding
chr20
34317385
34317431



SEQ ID NO. 1297
3904276
RBM39
Non-
chr20
34327102
34327246






coding (ncTranscript)


SEQ ID NO. 1298
3904281
RBM39
Non-
chr20
34328529
34328635






coding (ncTranscript)


SEQ ID NO. 1299
3906196
CHD6
Coding
chr20
40083276
40083334



SEQ ID NO. 1300
3907788
SLC35C2
Non-coding (UTR)
chr20
44978376
44978406



SEQ ID NO. 1301
3908789
STAU1
Non-coding (UTR)
chr20
47729881
47730036



SEQ ID NO. 1302
3909376
ADNP
Non-
chr20
49531572
49531914






coding (Intronic)


SEQ ID NO. 1303
3911474
VAPB
Non-coding (Exonic
chr20
57020464
57020567






Antisense)


SEQ ID NO. 1304
3911564
STX16, RP11-
Non-coding (Exonic
chr20
57252189
57252339





261P9.5
Antisense)


SEQ ID NO. 1305
3911706
GNAS
Non-coding (Exonic
chr20
57470704
57470737






Antisense)


SEQ ID NO. 1306
3911738
GNAS
Non-coding (Exonic
chr20
57485755
57485993






Antisense)


SEQ ID NO. 1307
3911801
ATP5E
Coding
chr20
57605376
57605455



SEQ ID NO. 1308
3911815
SLMO2
Non-coding (UTR)
chr20
57608287
57608462



SEQ ID NO. 1309
3913564
DIDO1
Coding
chr20
61536907
61536953



SEQ ID NO. 1310
3915125
USP25
Coding
chr21
17202860
17202896
+


SEQ ID NO. 1311
3917896
SOD1
Non-coding (UTR)
chr21
33041107
33041153
+


SEQ ID NO. 1312
3918586
IFNAR1
Coding
chr21
34715912
34715982
+


SEQ ID NO. 1313
3918651
IFNGR2
Non-
chr21
34804818
34804850
+





coding (Intronic)


SEQ ID NO. 1314
3918723
SON
Coding
chr21
34927046
34927291
+


SEQ ID NO. 1315
3918734
SON
Coding
chr21
34931543
34931653
+


SEQ ID NO. 1316
3919024
MRPS6
Non-coding (UTR)
chr21
35515288
35515318
+


SEQ ID NO. 1317
3920401
TTC3
Coding
chr21
38466361
38466389
+


SEQ ID NO. 1318
3920456
TTC3
Coding
chr21
38555078
38555116
+


SEQ ID NO. 1319
3920487
TTC3
Non-coding (UTR)
chr21
38574158
38575271
+


SEQ ID NO. 1320
3922023
FAM3B
Coding
chr21
42717624
42717654
+


SEQ ID NO. 1321
3922993
PKNOX1
Coding
chr21
44445014
44445052
+


SEQ ID NO. 1322
3924758
DIP2A
Non-coding (UTR)
chr21
47989552
47989586
+


SEQ ID NO. 1323
3925641
NRIP1
Non-coding (UTR)
chr21
16333709
16333966



SEQ ID NO. 1324
3926090
CXADR
Non-coding (Exonic
chr21
18940282
18940430






Antisense)


SEQ ID NO. 1325
3927180
ATP5J
Non-coding (UTR)
chr21
27096864
27096895



SEQ ID NO. 1326
3927228
APP
Non-coding (UTR)
chr21
27253137
27253203



SEQ ID NO. 1327
3927229
APP
Non-coding (UTR)
chr21
27253256
27253928



SEQ ID NO. 1328
3928670
TIAM1
Coding
chr21
32490760
32490873



SEQ ID NO. 1329
3929943
ATP5O, AP000304.12
Coding
chr21
35279673
35279756



SEQ ID NO. 1330
3934699
PTTG1IP
Coding
chr21
46271504
46271534



SEQ ID NO. 1331
3935246
LSS, AP001468.2
Non-coding (UTR)
chr21
47609049
47609184



SEQ ID NO. 1332
3935301
MCM3AP
Non-coding (UTR)
chr21
47655078
47655109



SEQ ID NO. 1333
3936897
MRPL40
Non-coding (UTR)
chr22
19423556
19423583
+


SEQ ID NO. 1334
3939407
SMARCB1
Non-coding (UTR)
chr22
24176665
24176692
+


SEQ ID NO. 1335
3942668
TUG1
Non-
chr22
31372108
31372178
+





coding (ncTranscript)


SEQ ID NO. 1336
3945331
DDX17
Non-coding (Exonic
chr22
38881930
38881962
+





Antisense)


SEQ ID NO. 1337
3945370
CBY1
Non-coding (UTR)
chr22
39069809
39069840
+


SEQ ID NO. 1338
3946374
ADSL, RP5-
Coding
chr22
40762454
40762500
+




1042K10.13


SEQ ID NO. 1339
3946589
XPNPEP3, RBX1
Non-coding (UTR)
chr22
41368540
41368588
+


SEQ ID NO. 1340
3946677
EP300
Coding
chr22
41566534
41566575
+


SEQ ID NO. 1341
3953804
PI4KA
Coding
chr22
21161651
21161735



SEQ ID NO. 1342
3956591
XBP1
Non-coding (UTR)
chr22
29190562
29190620



SEQ ID NO. 1343
3957262
SF3A1
Non-coding (UTR)
chr22
30730186
30730263



SEQ ID NO. 1344
3959259
RBFOX2
Non-
chr22
36334548
36334674






coding (Intronic)


SEQ ID NO. 1345
3959453
MYH9
Non-coding (UTR)
chr22
36677371
36677403



SEQ ID NO. 1346
3960634
DDX17
Non-coding (UTR)
chr22
38880599
38880760



SEQ ID NO. 1347
3961482
ADSL, RP5-
Non-coding (Exonic
chr22
40762473
40762565





1042K10.13
Antisense)


SEQ ID NO. 1348
3962268
NDUFA6
Non-coding (UTR)
chr22
42482152
42482181



SEQ ID NO. 1349
3962596
AL049757.3
Non-
chr22
43172653
43172678






coding (ncTranscript)


SEQ ID NO. 1350
3969510
OFD1
Coding
chrX
13787185
13787222
+


SEQ ID NO. 1351
3969511
OFD1
Non-coding (UTR)
chrX
13787252
13787317
+


SEQ ID NO. 1352
3970894
PDHA1
Coding
chrX
19377802
19377939
+


SEQ ID NO. 1353
3974757
USP9X
Coding
chrX
41043776
41043927
+


SEQ ID NO. 1354
3974789
USP9X
Coding
chrX
41082579
41082644
+


SEQ ID NO. 1355
3981154
OGT
Coding
chrX
70783211
70783337
+


SEQ ID NO. 1356
3981752
NCRNA00183
Non-
chrX
73219683
73219763
+





coding (ncTranscript)


SEQ ID NO. 1357
3981906
MIR374AHG
Non-coding (Intronic
chrX
73491128
73491377
+





Antisense)


SEQ ID NO. 1358
3982421
COX7B
Non-coding (UTR)
chrX
77160796
77160836
+


SEQ ID NO. 1359
3985558
NGFRAP1
Non-coding (UTR)
chrX
102632930
102632968
+


SEQ ID NO. 1360
3985635
TCEAL4
Non-coding (UTR)
chrX
102842274
102842422
+


SEQ ID NO. 1361
3986857
COL4A5
Non-coding (UTR)
chrX
107939988
107940724
+


SEQ ID NO. 1362
3987532
ALG13
Non-coding (UTR)
chrX
111003747
111003854
+


SEQ ID NO. 1363
3988214
RPI1-27G9.1
Non-
chrX
116097423
116097474
+





coding (ncTranscript)


SEQ ID NO. 1364
3989205
MCTS1
Non-coding (UTR)
chrX
119746133
119746224
+


SEQ ID NO. 1365
3989770
STAG2
Coding
chrX
123196985
123197053
+


SEQ ID NO. 1366
3991722
HPRT1
Non-coding (UTR)
chrX
133634517
133634660
+


SEQ ID NO. 1367
3993347
CDR1
Non-coding (Exonic
chrX
139865845
139865911
+





Antisense)


SEQ ID NO. 1368
3993349
CDR1
Non-coding (Exonic
chrX
139866456
139866504
+





Antisense)


SEQ ID NO. 1369
4004822
DYNLT3
Non-coding (UTR)
chrX
37698478
37698663



SEQ ID NO. 1370
4007593
SLC35A2
Non-coding (UTR)
chrX
48760908
48760940



SEQ ID NO. 1371
4009318
HUWE1
Non-coding (UTR)
chrX
53559796
53559831



SEQ ID NO. 1372
4009451
HUWE1
Coding
chrX
53654361
53654464



SEQ ID NO. 1373
4011604
IGBP1
Non-coding (Exonic
chrX
69385996
69386136






Antisense)


SEQ ID NO. 1374
4011967
OGT
Non-coding (Exonic
chrX
70765919
70766276






Antisense)


SEQ ID NO. 1375
4012169
RPS4X
Coding
chrX
71495419
71495459



SEQ ID NO. 1376
4012627
MIR374AHG
Non-
chrX
73473183
73473384






coding (Intronic)


SEQ ID NO. 1377
4012632
MIR374AHG
Non-
chrX
73477308
73477534






coding (Intronic)


SEQ ID NO. 1378
4012759
chrX−: 73429697-73429730
Non-
chrX
73429697
73429730






coding (Intergenic)


SEQ ID NO. 1379
4013274
ATRX
Coding
chrX
76937974
76938071



SEQ ID NO. 1380
4013282
ATRX
Coding
chrX
76939315
76939355



SEQ ID NO. 1381
4015535
HNRNPA1P27
Non-
chrX
100143214
100143253






coding (ncTranscript)


SEQ ID NO. 1382
4016549
TCEAL4
Non-coding (Exonic
chrX
102842274
102842394






Antisense)


SEQ ID NO. 1383
4016573
MORF4L2
Non-coding (UTR)
chrX
102930491
102930528



SEQ ID NO. 1384
4019367
PGRMC1
Non-coding (Exonic
chrX
118377548
118378125






Antisense)


SEQ ID NO. 1385
4019418
CXorf56
Non-coding (UTR)
chrX
118672165
118672189



SEQ ID NO. 1386
4019610
NDUFA1
Non-coding (Exonic
chrX
119010525
119010608






Antisense)


SEQ ID NO. 1387
4020462
THOC2
Non-
chrX
122752083
122752388






coding (Intronic)


SEQ ID NO. 1388
4024375
CDR1
Non-coding (UTR)
chrX
139865543
139865573



SEQ ID NO. 1389
4024376
CDR1
Non-coding (UTR)
chrX
139865644
139865739



SEQ ID NO. 1390
4024377
CDR1
Coding
chrX
139865828
139865852



SEQ ID NO. 1391
4024378
CDR1
Coding
chrX
139865883
139865921



SEQ ID NO. 1392
4024379
CDR1
Coding
chrX
139865939
139865971



SEQ ID NO. 1393
4030986
NCRNA00185
Non-coding (Intronic
chrY
21152685
21153560
+





Antisense)


SEQ ID NO. 1394
4034997
DDX3Y
Non-coding (Exonic
chrY
15030062
15030179






Antisense)


SEQ ID NO. 1395
4035834
NCRNA00185
Non-
chrY
21152548
21152618






coding (Intronic)


SEQ ID NO. 1396
4035835
NCRNA00185
Non-
chrY
21152684
21152813






coding (Intronic)


SEQ ID NO. 1397
4035838
NCRNA00185
Non-
chrY
21154041
21154065






coding (Intronic)


SEQ ID NO. 1398
4035839
CD24P4
Non-
chrY
21154244
21154350






coding (ncTranscript)


SEQ ID NO. 1399
4040526
ANAPCI1
Non-coding (UTR)
chr17
79858058
79858126
+


SEQ ID NO. 1400
4041367
P4HB
Coding
chr17
79813023
79813113



SEQ ID NO. 1401
4041822
DVL1
Non-coding (Exonic
chr1
1270724
1270751
+





Antisense)


SEQ ID NO. 1402
4043125
MIA3
Non-coding (UTR)
chr1
222839167
222839194
+


SEQ ID NO. 1403
4044199
MRPL20
Non-coding (UTR)
chr1
1337315
1337437



SEQ ID NO. 1404
4044413
PNRC2
Non-coding (Exonic
chr1
24289858
24289900






Antisense)


SEQ ID NO. 1405
4047577
RNF4
Non-coding (UTR)
chr4
2517539
2517569
+


SEQ ID NO. 1406
4052399
SNRNP35
Non-
chr12
123956765
123956890
+





coding (ncTranscript)


SEQ ID NO. 1407
4055295
ATRX
Coding
chrX
76939261
76939355



SEQ ID NO. 1408
4055302
ATRX
Coding
chrX
76937669
76938071



SEQ ID NO. 1409
2720180
LAP3
Non-coding (UTR)
chr4
17609540
17609571
+


SEQ ID NO. 1410
2347642
SLC44A3
Coding
chr1
95294064
95294116
+


SEQ ID NO. 1411
2395344
RERE
Non-
chr1
8626188
8626254






coding (Intronic)


SEQ ID NO. 1412
2397069
DHRS3
Non-
chr1
12675869
12676175






coding (Intronic)


SEQ ID NO. 1413
2430377
AL122007.1
Non-coding (Exonic
chr1
118406131
118406652






Antisense)


SEQ ID NO. 1414
2448270
TPR
Coding
chr1
186302264
186302484



SEQ ID NO. 1415
2553581
EML6
Non-coding (Exonic
chr2
55198361
55198412






Antisense)


SEQ ID NO. 1416
2600700
EPHA4
Non-coding (UTR)
chr2
222290193
222290664



SEQ ID NO. 1417
2624519
CACNA1D
Coding
chr3
53839020
53839140
+


SEQ ID NO. 1418
2651846
GPR160
Non-
chr3
169760241
169760280
+





coding (Intronic)


SEQ ID NO. 1419
2682441
RYBP
Coding
chr3
72428191
72428278



SEQ ID NO. 1420
2704512
MECOM
Non-
chr3
169039906
169040029






coding (Intronic)


SEQ ID NO. 1421
2704702
MECOM
Non-
chr3
169245434
169245479






coding (Intronic)


SEQ ID NO. 1422
2902832
C2, XXbac-
Coding
chr6
31912504
31912533
+




BPG116M5.17, CFB


SEQ ID NO. 1423
2918558
RP11-98I9.4
Non-
chr6
99874240
99874405
+





coding (Intronic)


SEQ ID NO. 1424
3031661
ABP1
Non-
chr7
150548944
150549009
+





coding (Intronic)


SEQ ID NO. 1425
3212761
AGTPBP1
Non-
chr9
88262440
88262595






coding (Intronic)


SEQ ID NO. 1426
3268183
TACC2
Non-
chr10
123995651
123995692
+





coding (Intronic)


SEQ ID NO. 1427
3472753
chr12−: 115105073-115105114
Non-
chr12
115105073
115105114






coding (Intergenic)


SEQ ID NO. 1428
3501557
ANKRD10
Non-coding (Intronic
chr13
111551671
111552005
+





Antisense)


SEQ ID NO. 1429
3543621
NUMB
Non-coding (Intronic
chr14
73924866
73924936
+





Antisense)


SEQ ID NO. 1430
3551833
YY1
Non-
chr14
100731828
100732634
+





coding (Intronic)


SEQ ID NO. 1431
3562041
PNN
Non-coding (Exonic
chr14
39650300
39650740






Antisense)


SEQ ID NO. 1432
3661099
RBL2
Coding
chr16
53514479
53514525
+


SEQ ID NO. 1433
3667907
DHX38
Coding
chr16
72131593
72131680
+


SEQ ID NO. 1434
3701840
MPHOSPH6
Non-coding (UTR)
chr16
82182086
82182335



SEQ ID NO. 1435
3840609
ZNF347
Non-coding (Intronic
chr19
53653851
53653898
+





Antisense)


SEQ ID NO. 1436
3889144
ATP9A
Non-coding (Exonic
chr20
50217042
50217277
+





Antisense)


SEQ ID NO. 1437
3889625
TSHZ2, AL354993.1
Coding
chr20
52105591
52105740
+


SEQ ID NO. 1438
3897081
PLCB1
Non-coding (Intronic
chr20
8419858
8419910






Antisense)


SEQ ID NO. 1439
3902441
DEFB121
Coding
chr20
29993912
29993949



SEQ ID NO. 1440
4026042
GABRE
Non-
chrX
151140414
151140607






coding (ncTranscript)









1,425 prognostic markers for MIBC recurrence. For each marker, the Affymetrix Probeset ID, associated gene, category and chromosomal location based on hg19 human genome version is indicated.












TABLE 17








Benjamini



Term
P-value



















GO: 0016071~mRNA metabolic process
0.000000



GO: 0006396~RNA processing
0.000000



GO: 0006412~translation
0.000000



GO: 0006397~mRNA processing
0.000000



GO: 0046907~intracellular transport
0.000000



GO: 0008380~RNA splicing
0.000000



GO: 0006414~translational elongation
0.000000



GO: 0015031~protein transport
0.000004



GO: 0045184~establishment of protein
0.000006



localization



GO: 0006403~RNA localization
0.00005



GO: 0051168~nuclear export
0.00007



GO: 0000377~RNA splicing, via
0.00007



transesterification reactions with bulged



adenosine as nucleophile



GO: 0000375~RNA splicing, via
0.00007



transesterification reactions



GO: 0000398~nuclear mRNA splicing, via
0.00007



spliceosome



GO: 0008104~protein localization
0.00007



GO: 0006913~nucleocytoplasmic transport
0.00009



GO: 0051236~establishment of RNA
0.00009



localization



GO: 0050657~nucleic acid transport
0.00009



GO: 0050658~RNA transport
0.00009



GO: 0007049~cell cycle
0.00009



GO: 0051169~nuclear transport
0.0001



GO: 0006405~RNA export from nucleus
0.0001



GO: 0006886~intracellular protein
0.0003



transport



GO: 0044265~cellular macromolecule
0.0004



catabolic process



GO: 0070727~cellular macromolecule
0.0007



localization



GO: 0015931~nucleobase, nucleoside,
0.0007



nucleotide and nucleic acid transport



GO: 0009057~macromolecule catabolic
0.001



process



GO: 0034613~cellular protein localization
0.001



GO: 0022402~cell cycle process
0.001



GO: 0000278~mitotic cell cycle
0.002



GO: 0051028~mRNA transport
0.004



GO: 0009141~nucleoside triphosphate
0.005



metabolic process



GO: 0006605~protein targeting
0.01



GO: 0022613~ribonucleoprotein complex
0.01



biogenesis



GO: 0009142~nucleoside triphosphate
0.01



biosynthetic process



GO: 0043933~macromolecular complex
0.01



subunit organization



GO: 0065003~macromolecular complex
0.01



assembly



GO: 0006259~DNA metabolic process
0.01



GO: 0051276~chromosome organization
0.01



GO: 0009201~ribonucleoside triphosphate
0.01



biosynthetic process



GO: 0006754~ATP biosynthetic process
0.01



GO: 0006406~mRNA export from nucleus
0.02



GO: 0046034~ATP metabolic process
0.02



GO: 0006325~chromatin organization
0.02



GO: 0006511~ubiquitin-dependent protein
0.02



catabolic process



GO: 0009199~ribonucleoside triphosphate
0.03



metabolic process



GO: 0043631~RNA polyadenylation
0.03



GO: 0016568~chromatin modification
0.03



GO:0006119~oxidative phosphorylation
0.03



GO: 0009206~purine ribonucleoside
0.03



triphosphate biosynthetic process



GO: 0006974~response to DNA damage
0.03



stimulus



GO: 0010605~negative regulation of
0.03



macromolecule metabolic process



GO:0009144~purine nucleoside
0.03



triphosphate metabolic process



GO: 0033554~cellular response to stress
0.03



GO: 0009145~purine nucleoside
0.03



triphosphate biosynthetic process



GO: 0070647~protein modification by
0.03



small protein conjugation or removal



GO: 0051603~proteolysis involved in
0.03



cellular protein catabolic process



GO: 0009260~ribonucleotide biosynthetic
0.03



process



GO: 0006892~post-Golgi vesicle-mediated
0.04



transport



GO: 0030518~steroid hormone receptor
0.04



signaling pathway



GO: 0044257~cellular protein catabolic
0.04



process



GO: 0022618~ribonucleoprotein complex
0.04



assembly



GO: 0034220~ion transmembrane transport
0.04



GO: 0030163~protein catabolic process
0.04



GO: 0015985~energy coupled proton
0.04



transport, down electrochemical gradient



GO: 0015986~ATP synthesis coupled
0.04



proton transport



GO: 0006457~protein folding
0.04



GO: 0006091~generation of precursor
0.04



metabolites and energy



GO: 0022403~cell cycle phase
0.04



GO: 0006461~protein complex assembly
0.04



GO: 0070271~protein complex biogenesis
0.04



GO: 0009152~purine ribonucleotide
0.04



biosynthetic process



GO: 0009205~purine ribonucleoside
0.04



triphosphate metabolic process










Gene Ontology enrichment of the prognostic markers selected. P-values shown are after correction for multiple testing using Benjamini-Hochberg method.
























TABLE 18





Affymetrix

















Probeset

WILCOX


ACCURACY





KM
UVA HR
UVA OR
MVA HR
MVA OR


ID
AUC
P-VALUE
MFD
ACCURACY
P-VALUE
SENSITIVITY
SPECIFICITY
PPV
NPV
CUTOFF
P-VALUE
P-VALUE
P-VALUE
P-VALUE
P-VALUE






























2318654
0.61
0.0104
1.28
0.61
0.0028
0.64
0.57
0.61
0.61
7.84
0.0046
0.0149
0.0103
0.2
0.022


2318755
0.62
0.0034
1.53
0.64
0.0001
0.6
0.68
0.66
0.63
5.42
0.0001
0.0027
0.0029
0.02
0.006


2320062
0.62
0.003
1.26
0.62
0.0011
0.62
0.61
0.62
0.61
4.99
0.0006
0.0029
0.0045
0.02
0.008


2321661
0.62
0.0034
1.34
0.62
0.0007
0.65
0.59
0.62
0.62
6.56
0.0021
0.0045
0.0025
0.05
0.006


2322383
0.61
0.0074
1.35
0.6
0.0042
0.6
0.6
0.61
0.6
5.28
0.0032
0.0095
0.009
0.05
0.019


2325809
0.61
0.0052
1.29
0.62
0.0011
0.63
0.6
0.62
0.61
6.05
0.001
0.0064
0.0056
0.15
0.046


2327494
0.62
0.0039
1.35
0.62
0.0011
0.63
0.6
0.62
0.61
6.48
0.0017
0.0027
0.0022
0.06
0.005


2327865
0.63
0.002
1.43
0.61
0.0018
0.65
0.57
0.61
0.62
5.32
0.0011
0.0014
0.0016
0.08
0.013


2328504
0.63
0.0019
1.31
0.63
0.0002
0.64
0.62
0.64
0.63
6.57
0.0006
0.0032
0.0013
0.04
0.003


2328507
0.64
0.0009
1.29
0.59
0.0138
0.46
0.72
0.63
0.56
5.28
0.009
0.004
0.0027
0.21
0.025


2329019
0.61
0.0089
1.29
0.61
0.0018
0.61
0.61
0.62
0.61
6.44
0.0011
0.0074
0.0071
0.11
0.014


2329798
0.62
0.004
1.45
0.6
0.0042
0.55
0.65
0.62
0.59
4.91
0.0066
0.0086
0.0065
0.1
0.053


2330704
0.6
0.0122
1.32
0.58
0.0276
0.59
0.56
0.58
0.57
5.04
0.0429
0.0159
0.0114
0.13
0.022


2331419
0.62
0.0043
1.28
0.58
0.0197
0.49
0.68
0.61
0.56
4.59
0.0151
0.012
0.0062
0.87
0.12


2331842
0.61
0.0103
1.32
0.6
0.0042
0.54
0.66
0.63
0.59
6
0.0052
0.009
0.0077
0.22
0.065


2332192
0.65
0.0004
1.6
0.61
0.0018
0.57
0.65
0.63
0.6
4.91
0.0009
0.0005
0.0005
0.06
0.011


2332740
0.64
0.0006
1.31
0.61
0.0018
0.5
0.72
0.65
0.59
3.65
0.001
0.0007
0.0014
0.02
0.004


2334302
0.62
0.0044
1.31
0.62
0.0011
0.62
0.61
0.62
0.61
6.23
0.0023
0.0051
0.0035
0.12
0.008


2336960
0.64
0.0005
1.26
0.62
0.0007
0.61
0.63
0.63
0.61
6.56
0.0005
0.0009
0.0006
0.08
0.009


2339310
0.61
0.0055
1.35
0.61
0.0018
0.53
0.69
0.64
0.59
4.5
0.0017
0.0071
0.0062
0.15
0.028


2342617
0.62
0.0034
1.27
0.58
0.0276
0.45
0.71
0.62
0.56
4.65
0.0382
0.0211
0.0088
0.15
0.012


2345634
0.64
0.0006
1.36
0.6
0.0064
0.62
0.57
0.6
0.6
4.71
0.0046
0.0003
0.0005
0.02
0.002


2345663
0.67
0
1.25
0.64
0.0001
0.68
0.59
0.63
0.64
4.43
0.0006
0
0
0.03
0.001


2345666
0.61
0.0092
1.33
0.6
0.0064
0.53
0.66
0.62
0.58
4.06
0.0021
0.0116
0.0152
0.16
0.101


2346911
0.62
0.0041
1.34
0.62
0.0011
0.55
0.68
0.64
0.6
7.34
0.0011
0.0042
0.0043
0.51
0.118


2346912
0.63
0.0017
1.34
0.56
0.0681
0.41
0.72
0.6
0.54
3.86
0.1027
0.0139
0.0051
0.23
0.032


2347108
0.62
0.004
1.33
0.6
0.0064
0.51
0.68
0.63
0.58
5.73
0.0064
0.0068
0.0049
0.13
0.036


2348819
0.63
0.0014
1.33
0.63
0.0002
0.63
0.63
0.64
0.63
5.92
0.0002
0.0019
0.0013
0.14
0.011


2350305
0.62
0.0032
1.31
0.63
0.0004
0.63
0.62
0.63
0.62
5.19
0.0005
0.0026
0.0025
0.26
0.085


2350371
0.67
0.0001
1.28
0.61
0.0028
0.47
0.76
0.66
0.58
4.38
0.0012
0.0002
0.0001
0.05
0.016


2352268
0.63
0.0015
1.27
0.61
0.0028
0.57
0.64
0.62
0.59
6.23
0.0028
0.0026
0.0032
0.06
0.01


2353492
0.6
0.0139
1.25
0.59
0.0095
0.61
0.57
0.6
0.59
5.83
0.0151
0.0102
0.0144
0.11
0.025


2358275
0.64
0.0009
1.25
0.62
0.0011
0.56
0.67
0.64
0.6
4.26
0.0009
0.001
0.0018
0.06
0.067


2358923
0.61
0.0058
1.39
0.65
0
0.69
0.6
0.64
0.66
6.94
0
0.0052
0.0046
0.07
0.009


2359857
0.65
0.0003
1.32
0.63
0.0004
0.6
0.65
0.64
0.62
4.36
0.0006
0.0009
0.0005
0.03
0.008


2360078
0.65
0.0003
1.29
0.61
0.0018
0.54
0.68
0.64
0.59
7.33
0.0018
0.0003
0.0005
0.03
0.002


2360119
0.64
0.0006
1.26
0.65
0
0.64
0.65
0.66
0.64
7.33
0.0001
0.0005
0.0005
0.02
0.004


2360120
0.65
0.0002
1.25
0.61
0.0018
0.61
0.61
0.62
0.61
7.06
0.001
0.0001
0.0002
0.01
0.001


2360340
0.64
0.0004
1.26
0.65
0
0.57
0.72
0.68
0.62
5.7
0
0.0004
0.0006
0.02
0.012


2360716
0.61
0.0054
1.26
0.62
0.0011
0.7
0.53
0.61
0.63
7.26
0.0018
0.0082
0.0061
0.12
0.016


2360962
0.64
0.0005
1.34
0.64
0.0001
0.61
0.66
0.65
0.63
5.34
0.0001
0.0004
0.0005
0.02
0.003


2361031
0.61
0.0082
1.27
0.59
0.0138
0.51
0.66
0.61
0.57
3.26
0.0065
0.0304
0.025
0.12
0.06


2363064
0.64
0.0006
1.27
0.62
0.0011
0.62
0.61
0.62
0.61
6.56
0.0014
0.0006
0.0005
0.04
0.003


2363334
0.6
0.0138
1.25
0.56
0.0681
0.54
0.58
0.57
0.55
5.05
0.0524
0.0144
0.0146
0.43
0.19


2363956
0.63
0.0012
1.26
0.61
0.0018
0.51
0.71
0.65
0.59
4.39
0.0046
0.0069
0.0039
0.27
0.052


2365991
0.61
0.0091
1.48
0.59
0.0138
0.55
0.62
0.6
0.58
4.71
0.0136
0.0237
0.0154
0.16
0.044


2367178
0.65
0.0002
1.41
0.64
0.0001
0.61
0.66
0.65
0.63
5.15
0.0001
0.0006
0.0004
0.06
0.005


2367214
0.61
0.0062
1.42
0.6
0.0064
0.61
0.58
0.6
0.59
4.86
0.0052
0.0079
0.0065
0.1
0.017


2367236
0.6
0.0119
1.3
0.61
0.0028
0.6
0.61
0.62
0.6
5.7
0.0027
0.0067
0.0095
0.37
0.135


2369830
0.65
0.0002
1.41
0.59
0.0138
0.54
0.63
0.6
0.57
4.65
0.0121
0.0008
0.0008
0.07
0.021


2370014
0.63
0.0022
1.27
0.6
0.0064
0.57
0.62
0.61
0.59
4.41
0.0047
0.001
0.0021
0.13
0.058


2371291
0.66
0.0001
1.27
0.6
0.0042
0.5
0.7
0.64
0.58
5.49
0.0025
0.0001
0.0003
0.04
0.018


2371339
0.63
0.0021
1.34
0.6
0.0064
0.54
0.65
0.62
0.58
4.45
0.0045
0.012
0.0094
0.1
0.026


2371796
0.65
0.0002
1.31
0.59
0.0095
0.5
0.68
0.62
0.57
5.76
0.004
0.0003
0.0005
0.02
0.005


2373002
0.62
0.0042
1.38
0.6
0.0042
0.51
0.69
0.63
0.58
4.06
0.0014
0.02
0.019
0.05
0.025


2375035
0.65
0.0002
1.41
0.62
0.0007
0.51
0.73
0.67
0.6
4.75
0.0002
0.0001
0.0001
0.02
0.002


2375037
0.65
0.0002
1.25
0.62
0.0007
0.59
0.65
0.64
0.61
6.97
0.0013
0.0003
0.0002
0.05
0.003


2375675
0.63
0.0014
1.37
0.62
0.0011
0.59
0.64
0.63
0.61
5.35
0.0024
0.0035
0.0013
0.18
0.014


2375780
0.61
0.0102
1.36
0.58
0.0197
0.53
0.63
0.6
0.57
6.05
0.0192
0.0159
0.012
0.15
0.013


2375850
0.64
0.0006
1.26
0.64
0.0001
0.65
0.63
0.65
0.64
6.63
0.0001
0.0008
0.0009
0.09
0.014


2375890
0.61
0.0058
1.28
0.6
0.0042
0.67
0.53
0.6
0.61
6.77
0.0035
0.0059
0.0046
0.11
0.009


2377473
0.65
0.0004
1.34
0.6
0.0064
0.5
0.69
0.63
0.58
5.02
0.0034
0.0007
0.0008
0.05
0.003


2377508
0.64
0.0005
1.52
0.63
0.0002
0.68
0.58
0.63
0.64
5.81
0.0001
0.0003
0.0005
0.01
0.002


2378615
0.61
0.0057
1.29
0.57
0.0513
0.47
0.67
0.59
0.55
3.72
0.0199
0.0089
0.0238
0.03
0.072


2379787
0.62
0.0024
1.3
0.62
0.0007
0.71
0.53
0.61
0.64
4.58
0.0012
0.0041
0.003
0.2
0.038


2383763
0.62
0.0045
1.3
0.6
0.0064
0.59
0.6
0.61
0.59
6.42
0.0072
0.0039
0.0049
0.06
0.013


2389076
0.62
0.0028
1.34
0.61
0.0018
0.53
0.69
0.64
0.59
4.92
0.0007
0.0025
0.0032
0.18
0.014


2389079
0.64
0.0006
1.29
0.6
0.0064
0.5
0.7
0.63
0.58
4.6
0.0082
0.001
0.0011
0.05
0.01


2389084
0.61
0.0105
1.27
0.62
0.0011
0.48
0.77
0.68
0.59
5.19
0.0002
0.0033
0.0064
0.05
0.031


2389086
0.64
0.0004
1.27
0.6
0.0064
0.54
0.65
0.62
0.58
5.44
0.0037
0.0005
0.0007
0.03
0.02


2389817
0.65
0.0002
1.3
0.61
0.0018
0.55
0.67
0.64
0.59
7.1
0.0021
0.0008
0.0007
0.05
0.004


2394560
0.61
0.0062
1.62
0.61
0.0028
0.63
0.58
0.61
0.61
5.1
0.002
0.0071
0.0053
0.07
0.01


2395192
0.62
0.0035
1.35
0.61
0.0018
0.53
0.69
0.64
0.59
6.14
0.0007
0.0013
0.0023
0.01
0.005


2395195
0.64
0.0006
1.26
0.62
0.0007
0.52
0.72
0.66
0.6
5.43
0.0002
0.001
0.0015
0.01
0.004


2396421
0.63
0.0019
1.27
0.61
0.0018
0.6
0.62
0.62
0.6
4.26
0.0007
0.0024
0.0032
0
0.003


2400180
0.63
0.0016
1.29
0.61
0.0018
0.5
0.72
0.65
0.59
6.32
0.0014
0.0008
0.0012
0.07
0.022


2400323
0.63
0.0011
1.3
0.58
0.0276
0.43
0.73
0.62
0.55
4.31
0.0167
0.0015
0.0025
0.1
0.041


2401277
0.65
0.0002
1.26
0.62
0.0007
0.52
0.72
0.66
0.6
2.91
0.0004
0.0002
0.0005
0.01
0


2401288
0.64
0.0005
1.26
0.63
0.0004
0.69
0.56
0.62
0.64
5.91
0.0002
0.0005
0.0007
0.01
0.002


2401350
0.65
0.0004
1.37
0.63
0.0002
0.63
0.63
0.64
0.63
5.21
0.0001
0.0005
0.0005
0.02
0.002


2401368
0.65
0.0002
1.38
0.65
0
0.59
0.71
0.68
0.63
4.69
0
0
0.0001
0.02
0.021


2402210
0.64
0.0004
1.25
0.62
0.0007
0.57
0.67
0.64
0.61
5.89
0.0004
0.0012
0.0012
0.04
0.006


2405379
0.63
0.0013
1.35
0.61
0.0028
0.58
0.63
0.62
0.6
5.61
0.0026
0.0017
0.0016
0.03
0.008


2406094
0.63
0.0018
1.43
0.62
0.0007
0.6
0.64
0.64
0.61
6.24
0.0003
0.0014
0.0019
0.08
0.015


2406148
0.6
0.0136
1.36
0.63
0.0004
0.71
0.54
0.62
0.65
5.88
0.0009
0.0208
0.0132
0.22
0.034


2407134
0.61
0.0063
1.35
0.61
0.0028
0.56
0.65
0.63
0.59
4.55
0.0013
0.0034
0.0046
0.08
0.027


2408880
0.61
0.0062
1.26
0.58
0.0276
0.49
0.67
0.6
0.56
4.83
0.0153
0.0024
0.0069
0.02
0.024


2410112
0.63
0.0015
1.38
0.6
0.0042
0.66
0.54
0.6
0.61
5.4
0.0056
0.0016
0.001
0.02
0.002


2410528
0.62
0.0043
1.29
0.62
0.0007
0.72
0.52
0.61
0.65
6.06
0.0004
0.0046
0.0058
0.05
0.011


2412669
0.62
0.0038
1.35
0.59
0.0095
0.53
0.65
0.61
0.58
4.74
0.0137
0.0096
0.0064
0.1
0.019


2413580
0.63
0.0015
1.27
0.6
0.0042
0.53
0.67
0.63
0.58
5.1
0.0023
0.0068
0.0044
0.12
0.021


2414030
0.63
0.0015
1.43
0.61
0.0028
0.55
0.66
0.63
0.59
4.8
0.0039
0.0031
0.002
0.04
0.007


2414960
0.64
0.001
1.4
0.59
0.0138
0.54
0.63
0.6
0.57
4.87
0.0112
0.0005
0.0014
0.02
0.012


2417788
0.61
0.0067
1.29
0.6
0.0042
0.54
0.66
0.63
0.59
4.95
0.0017
0.0071
0.0069
0.19
0.047


2418028
0.62
0.0035
1.28
0.64
0.0001
0.6
0.68
0.66
0.63
5.64
0.0001
0.0028
0.0029
0.08
0.017


2419242
0.65
0.0002
1.35
0.6
0.0042
0.46
0.76
0.66
0.57
4.58
0.002
0.0006
0.0004
0.1
0.008


2419247
0.61
0.0076
1.3
0.6
0.0042
0.52
0.68
0.63
0.58
5.26
0.0031
0.0063
0.0047
0.54
0.073


2419276
0.65
0.0002
1.29
0.62
0.0007
0.64
0.6
0.63
0.62
5.81
0.0009
0.0004
0.0003
0.06
0.004


2420740
0.61
0.0086
1.39
0.57
0.038
0.52
0.62
0.59
0.56
4.21
0.0444
0.0104
0.0087
0.34
0.078


2420839
0.6
0.0113
1.3
0.62
0.0011
0.5
0.74
0.67
0.59
4.79
0.0006
0.0042
0.0044
0.18
0.079


2421273
0.64
0.0009
1.28
0.62
0.0007
0.54
0.7
0.65
0.6
6.21
0.0004
0.0009
0.0009
0.08
0.007


2421274
0.63
0.0013
1.32
0.63
0.0002
0.51
0.76
0.68
0.6
4.85
0.0001
0.0014
0.0015
0.25
0.034


2421932
0.61
0.006
1.27
0.61
0.0018
0.69
0.53
0.6
0.63
6.69
0.0041
0.0152
0.0062
0.27
0.014


2422519
0.62
0.0039
1.32
0.63
0.0004
0.57
0.68
0.65
0.61
4.68
0.0005
0.0052
0.004
0.18
0.02


2423200
0.65
0.0003
1.35
0.62
0.0007
0.62
0.62
0.63
0.62
7.02
0.0009
0.0003
0.0003
0.09
0.005


2427009
0.6
0.0108
1.45
0.59
0.0138
0.54
0.63
0.6
0.57
3.93
0.0112
0.0106
0.0105
0.04
0.01


2427501
0.64
0.001
1.48
0.6
0.0064
0.57
0.62
0.61
0.59
4.97
0.0075
0.0015
0.0015
0.11
0.013


2427978
0.63
0.0022
1.29
0.63
0.0004
0.62
0.63
0.64
0.62
6.01
0.0005
0.0032
0.0022
0.03
0.009


2428394
0.65
0.0003
1.31
0.65
0
0.59
0.7
0.67
0.63
6.29
0
0.0005
0.0003
0.05
0.004


2429071
0.62
0.0028
1.25
0.57
0.038
0.5
0.64
0.59
0.56
4.26
0.0596
0.0113
0.0054
0.05
0.006


2429119
0.65
0.0003
1.33
0.62
0.0011
0.57
0.66
0.64
0.6
5.45
0.0025
0.0008
0.0005
0.05
0.001


2429168
0.61
0.0075
1.39
0.57
0.0513
0.51
0.62
0.58
0.55
3.73
0.047
0.0176
0.0208
0.34
0.201


2429282
0.66
0.0001
1.32
0.62
0.0007
0.53
0.71
0.66
0.6
5
0.0005
0.0002
0.0002
0.04
0.007


2429309
0.63
0.0015
1.28
0.62
0.0011
0.62
0.61
0.62
0.61
6.71
0.0015
0.0011
0.001
0.11
0.009


2429310
0.64
0.0005
1.56
0.63
0.0004
0.65
0.6
0.63
0.63
5.66
0.0005
0.0005
0.0005
0.05
0.006


2433376
0.61
0.0063
1.29
0.64
0.0001
0.63
0.64
0.65
0.63
4.93
0.0001
0.0174
0.0114
0.08
0.013


2434721
0.63
0.001
1.26
0.6
0.0064
0.53
0.66
0.62
0.58
5.68
0.007
0.0015
0.0013
0.17
0.046


2435391
0.62
0.0031
1.27
0.61
0.0018
0.53
0.69
0.64
0.59
6.45
0.0006
0.0025
0.0049
0.01
0.01


2437095
0.61
0.0074
1.3
0.6
0.0042
0.65
0.55
0.6
0.61
6.32
0.005
0.0125
0.008
0.13
0.02


2437537
0.62
0.0027
1.37
0.6
0.0042
0.53
0.67
0.63
0.58
5.11
0.0031
0.0049
0.0035
0.49
0.153


2437538
0.65
0.0004
1.4
0.62
0.0007
0.71
0.53
0.61
0.64
6.07
0.0007
0.0006
0.0003
0.03
0.001


2437680
0.65
0.0004
1.3
0.61
0.0028
0.55
0.66
0.63
0.59
4.57
0.002
0.002
0.0015
0.08
0.037


2437775
0.62
0.0023
1.34
0.59
0.0095
0.48
0.71
0.63
0.57
4.27
0.0094
0.0051
0.0042
0.43
0.119


2439041
0.64
0.0009
1.27
0.62
0.0007
0.57
0.67
0.64
0.61
4.7
0.0005
0.0019
0.0014
0.18
0.071


2440149
0.6
0.0128
1.26
0.58
0.0197
0.53
0.63
0.6
0.57
4.89
0.0115
0.0112
0.0172
0.12
0.075


2440513
0.63
0.0015
1.27
0.61
0.0018
0.73
0.49
0.6
0.64
8
0.0021
0.0024
0.0023
0.06
0.005


2442702
0.63
0.0011
1.34
0.62
0.0011
0.53
0.7
0.65
0.59
5.39
0.0007
0.0022
0.002
0.03
0.006


2443917
0.63
0.0021
1.31
0.61
0.0028
0.53
0.68
0.64
0.59
4.6
0.0037
0.0035
0.0023
0.36
0.05


2444488
0.6
0.0142
1.3
0.6
0.0064
0.49
0.71
0.64
0.57
3.88
0.0038
0.0109
0.0118
0.27
0.055


2444489
0.62
0.0042
1.3
0.56
0.0681
0.41
0.72
0.6
0.54
4.28
0.0584
0.01
0.0111
0.29
0.075


2448289
0.64
0.0007
1.31
0.65
0
0.63
0.67
0.67
0.64
3.57
0.0001
0.0072
0.0037
0.12
0.026


2448313
0.63
0.0019
1.41
0.59
0.0095
0.5
0.68
0.62
0.57
4.02
0.0037
0.0022
0.0035
0.04
0.014


2450669
0.63
0.0019
1.41
0.6
0.0042
0.64
0.56
0.6
0.6
4.96
0.0033
0.0014
0.0012
0.02
0.003


2451314
0.61
0.0073
1.34
0.59
0.0095
0.54
0.64
0.61
0.58
4.6
0.0095
0.0029
0.0048
0.06
0.013


2452652
0.65
0.0002
1.4
0.65
0
0.69
0.6
0.64
0.66
6.12
0.0001
0.0002
0.0001
0.01
0.001


2452655
0.61
0.0053
1.41
0.61
0.0018
0.52
0.7
0.65
0.59
4.82
0.0005
0.002
0.0064
0.04
0.049


2457626
0.65
0.0003
1.28
0.64
0.0001
0.59
0.69
0.67
0.62
5.46
0
0.0012
0.0007
0.23
0.043


2458075
0.62
0.0033
1.46
0.59
0.0095
0.53
0.65
0.61
0.58
5.43
0.0052
0.0036
0.0043
0.05
0.016


2458381
0.62
0.0035
1.26
0.57
0.038
0.51
0.63
0.59
0.56
5.01
0.0397
0.003
0.0038
0.17
0.039


2458503
0.64
0.0005
1.3
0.62
0.0007
0.63
0.61
0.63
0.62
5.95
0.0007
0.0006
0.0005
0.04
0.004


2459655
0.63
0.0011
1.3
0.61
0.0028
0.56
0.65
0.63
0.59
6.21
0.0011
0.001
0.0011
0.08
0.013


2461827
0.66
0.0001
1.33
0.65
0
0.61
0.69
0.67
0.64
5.1
0
0.0004
0.0004
0.03
0.003


2461828
0.63
0.0011
1.26
0.6
0.0042
0.56
0.64
0.62
0.59
5.38
0.0039
0.0014
0.0012
0.06
0.005


2462178
0.61
0.0099
1.3
0.57
0.0513
0.5
0.63
0.59
0.55
4.63
0.0735
0.005
0.0071
0.09
0.018


2464496
0.65
0.0003
1.55
0.64
0.0001
0.58
0.69
0.66
0.62
5.59
0.0001
0.0001
0.0003
0.01
0.001


2464505
0.64
0.0006
1.28
0.61
0.0018
0.58
0.64
0.63
0.6
6.37
0.0019
0.0007
0.0007
0.04
0.005


2464514
0.63
0.002
1.28
0.62
0.0011
0.6
0.63
0.63
0.61
5.79
0.001
0.0023
0.0018
0.07
0.012


2464537
0.62
0.0042
1.34
0.65
0
0.62
0.68
0.67
0.64
5.63
0
0.003
0.0032
0.15
0.011


2468935
0.6
0.0107
1.27
0.58
0.0197
0.56
0.6
0.59
0.57
4.61
0.0509
0.0299
0.01
0.29
0.034


2469568
0.64
0.0006
1.29
0.61
0.0028
0.49
0.73
0.65
0.58
4.39
0.0014
0.0039
0.0036
0.09
0.031


2473241
0.67
0.0001
1.25
0.63
0.0002
0.56
0.7
0.66
0.61
4.78
0.0003
0.0002
0.0002
0.07
0.013


2473624
0.64
0.0009
1.57
0.63
0.0002
0.62
0.64
0.64
0.62
5.03
0.0003
0.0011
0.0007
0.01
0.001


2474147
0.61
0.0063
1.28
0.6
0.0064
0.67
0.52
0.59
0.61
6.87
0.0067
0.0054
0.0067
0.08
0.042


2474700
0.65
0.0003
1.34
0.64
0.0001
0.69
0.59
0.64
0.65
5.15
0.0001
0.0006
0.0004
0.05
0.005


2474770
0.64
0.0006
1.29
0.64
0.0001
0.64
0.64
0.65
0.64
6.1
0.0001
0.0011
0.0005
0.02
0.002


2475647
0.61
0.0101
1.28
0.58
0.0276
0.48
0.68
0.61
0.56
5.08
0.0463
0.0278
0.0158
0.29
0.094


2476316
0.66
0.0001
1.25
0.64
0.0001
0.57
0.7
0.67
0.62
4.91
0.0001
0.0004
0.0004
0.09
0.007


2476408
0.63
0.0022
1.53
0.63
0.0004
0.61
0.64
0.64
0.62
4.89
0.0003
0.0013
0.0017
0.02
0.006


2477341
0.6
0.0128
1.26
0.6
0.0042
0.61
0.59
0.61
0.6
5.26
0.0028
0.0224
0.0138
0.3
0.047


2478839
0.62
0.005
1.25
0.62
0.0007
0.61
0.63
0.63
0.61
6.44
0.001
0.008
0.0045
0.09
0.006


2479729
0.64
0.0004
1.3
0.61
0.0028
0.66
0.55
0.6
0.61
5.19
0.0021
0.0006
0.0005
0.02
0.002


2480989
0.63
0.0011
1.31
0.57
0.038
0.45
0.7
0.61
0.55
4.89
0.0197
0.0019
0.0016
0.03
0.003


2481178
0.64
0.0007
1.44
0.63
0.0002
0.6
0.66
0.65
0.62
4.99
0.0003
0.001
0.0008
0.02
0.002


2482593
0.63
0.0012
1.33
0.61
0.0018
0.56
0.66
0.63
0.6
5.41
0.0011
0.0023
0.002
0.03
0.005


2482624
0.63
0.0014
1.25
0.63
0.0002
0.72
0.54
0.62
0.65
6.89
0.0003
0.0019
0.0015
0.03
0.003


2483047
0.61
0.0058
1.34
0.59
0.0095
0.57
0.61
0.6
0.58
4.92
0.0052
0.01
0.0104
0.06
0.013


2484558
0.65
0.0003
1.42
0.64
0.0001
0.49
0.8
0.71
0.6
4.17
0
0.0002
0.0003
0.03
0.002


2484807
0.62
0.0035
1.25
0.6
0.0042
0.71
0.49
0.59
0.62
6.47
0.0057
0.0048
0.0023
0.01
0.001


2485214
0.6
0.0136
1.3
0.58
0.0276
0.54
0.61
0.59
0.57
5.47
0.0351
0.0224
0.0135
0.08
0.009


2485276
0.61
0.0085
1.29
0.59
0.0138
0.54
0.63
0.6
0.57
4.36
0.0166
0.0417
0.0294
0.31
0.1


2487216
0.61
0.0063
1.39
0.58
0.0276
0.51
0.64
0.6
0.56
5.37
0.0365
0.0035
0.0042
0.13
0.024


2487645
0.63
0.0015
1.27
0.63
0.0004
0.57
0.68
0.65
0.61
5.9
0.0005
0.0034
0.0019
0.09
0.011


2488150
0.65
0.0002
1.27
0.62
0.0011
0.61
0.62
0.63
0.61
5.02
0.0012
0.0001
0.0002
0.02
0.007


2489030
0.62
0.0043
1.28
0.59
0.0138
0.53
0.64
0.61
0.57
5.84
0.0133
0.0086
0.0042
0.29
0.035


2489435
0.63
0.0019
1.25
0.63
0.0002
0.65
0.61
0.63
0.63
6.02
0.0002
0.0021
0.0016
0.01
0.003


2491645
0.64
0.0006
1.27
0.62
0.0007
0.62
0.62
0.63
0.62
6.38
0.0005
0.0009
0.0007
0.04
0.007


2492101
0.63
0.0013
1.25
0.6
0.0064
0.5
0.69
0.63
0.58
3.78
0.0078
0.0014
0.003
0.04
0.01


2492833
0.61
0.0066
1.34
0.59
0.0138
0.55
0.62
0.6
0.58
5.88
0.0047
0.0018
0.0054
0.04
0.089


2495140
0.63
0.0015
1.43
0.62
0.0011
0.65
0.58
0.62
0.62
4.83
0.0013
0.002
0.0016
0.08
0.006


2498988
0.61
0.006
1.3
0.58
0.0197
0.48
0.69
0.62
0.56
4.48
0.0246
0.0105
0.011
0.13
0.028


2507241
0.66
0.0001
1.4
0.61
0.0028
0.51
0.7
0.64
0.58
5.19
0.0019
0.0004
0.0004
0.05
0.005


2507514
0.62
0.0031
1.25
0.58
0.0197
0.53
0.63
0.6
0.57
6.15
0.0392
0.0044
0.0034
0.02
0.003


2507533
0.64
0.0005
1.25
0.64
0.0001
0.64
0.64
0.65
0.64
6.62
0.0001
0.0005
0.0004
0.04
0.003


2512351
0.62
0.0024
1.29
0.62
0.0007
0.56
0.68
0.65
0.6
4.68
0.0009
0.0053
0.0049
0.08
0.02


2512363
0.62
0.0044
1.3
0.57
0.038
0.5
0.64
0.59
0.56
3.74
0.0309
0.0093
0.0079
0.05
0.01


2512959
0.63
0.0013
1.26
0.6
0.0064
0.56
0.63
0.61
0.58
3.93
0.0045
0.0039
0.0033
0.04
0.013


2515085
0.63
0.0017
1.27
0.63
0.0004
0.63
0.62
0.63
0.62
7.13
0.0003
0.001
0.0016
0.03
0.017


2517330
0.64
0.0009
1.31
0.6
0.0042
0.45
0.77
0.66
0.57
4.33
0.0023
0.0035
0.0028
0.13
0.025


2518193
0.63
0.0013
1.27
0.63
0.0004
0.71
0.54
0.62
0.65
5.44
0.0005
0.0029
0.0024
0.15
0.008


2518707
0.63
0.0018
1.29
0.59
0.0138
0.54
0.63
0.6
0.57
5.24
0.0072
0.0009
0.0024
0.03
0.034


2525095
0.65
0.0003
1.29
0.62
0.0007
0.58
0.66
0.64
0.61
5.56
0.001
0.0014
0.001
0.09
0.004


2527206
0.63
0.0016
1.29
0.6
0.0042
0.69
0.51
0.59
0.62
8.09
0.0037
0.0025
0.0023
0.09
0.008


2527635
0.62
0.0033
1.25
0.58
0.0197
0.52
0.64
0.6
0.57
4.94
0.0205
0.0046
0.0041
0.06
0.007


2532844
0.62
0.0051
1.26
0.59
0.0138
0.5
0.68
0.62
0.57
4.66
0.017
0.0122
0.009
0.26
0.059


2534447
0.63
0.0014
1.29
0.62
0.0011
0.51
0.72
0.66
0.59
5.77
0.001
0.0027
0.0018
0.06
0.009


2537112
0.64
0.0007
1.35
0.63
0.0002
0.65
0.61
0.63
0.63
6.32
0.0002
0.0006
0.0009
0.03
0.011


2539775
0.63
0.0011
1.33
0.61
0.0028
0.5
0.72
0.65
0.58
4.61
0.0023
0.0024
0.0016
0.09
0.011


2540221
0.62
0.0038
1.32
0.63
0.0004
0.67
0.58
0.62
0.63
6.24
0.0008
0.0033
0.0023
0.05
0.007


2544180
0.62
0.0041
1.27
0.62
0.0007
0.62
0.62
0.63
0.62
6.55
0.0006
0.0047
0.0028
0.04
0.003


2544185
0.6
0.0107
1.27
0.55
0.1438
0.35
0.76
0.59
0.53
4.72
0.0545
0.0234
0.0369
0.14
0.11


2544295
0.61
0.0059
1.43
0.59
0.0138
0.54
0.63
0.6
0.57
4.66
0.0201
0.011
0.0081
0.39
0.11


2544306
0.62
0.0045
1.25
0.59
0.0138
0.43
0.76
0.64
0.56
5.45
0.015
0.014
0.0103
0.49
0.177


2546279
0.62
0.0029
1.49
0.62
0.0007
0.64
0.6
0.63
0.62
5.03
0.0014
0.0063
0.003
0.11
0.009


2549323
0.62
0.0032
1.34
0.59
0.0095
0.52
0.66
0.62
0.58
4.74
0.0102
0.0024
0.0049
0.03
0.015


2550840
0.62
0.0035
1.27
0.63
0.0004
0.54
0.71
0.66
0.6
4.91
0.0001
0.0043
0.006
0.1
0.022


2550842
0.62
0.0034
1.33
0.59
0.0138
0.5
0.67
0.61
0.57
3.67
0.0178
0.0125
0.0106
0.09
0.023


2550964
0.67
0
1.27
0.64
0.0001
0.61
0.67
0.66
0.63
5.74
0.0001
0.0001
0.0001
0.02
0.001


2552021
0.63
0.0017
1.5
0.61
0.0018
0.53
0.69
0.64
0.59
4.86
0.0011
0.0028
0.002
0.06
0.006


2553312
0.63
0.002
1.27
0.63
0.0004
0.63
0.62
0.63
0.62
5.72
0.0004
0.0023
0.0021
0.12
0.015


2553583
0.63
0.0012
1.27
0.6
0.0042
0.71
0.49
0.59
0.62
7.2
0.0063
0.0019
0.0014
0.05
0.004


2553585
0.63
0.0013
1.71
0.61
0.0018
0.52
0.7
0.65
0.59
5.48
0.0006
0.0006
0.001
0.04
0.011


2553595
0.62
0.0031
1.38
0.6
0.0042
0.57
0.63
0.62
0.59
5.43
0.0024
0.0023
0.0029
0.07
0.015


2553907
0.63
0.0012
1.31
0.59
0.0095
0.47
0.72
0.64
0.57
4.28
0.0043
0.0028
0.0039
0.19
0.052


2554001
0.63
0.0018
1.42
0.6
0.0042
0.5
0.71
0.64
0.58
3.88
0.0009
0.0015
0.0025
0.06
0.037


2555279
0.62
0.004
1.36
0.6
0.0064
0.56
0.63
0.61
0.58
5.6
0.0113
0.0095
0.0048
0.2
0.024


2555281
0.64
0.0006
1.29
0.58
0.0197
0.45
0.72
0.63
0.56
4.35
0.0033
0.0021
0.0029
0.01
0.007


2555288
0.62
0.0028
1.29
0.6
0.0064
0.5
0.69
0.63
0.58
4.4
0.0026
0.0029
0.0052
0.11
0.052


2555330
0.65
0.0004
1.28
0.6
0.0042
0.45
0.77
0.66
0.57
4.24
0.0025
0.0011
0.0012
0.21
0.039


2555409
0.62
0.0046
1.31
0.61
0.0028
0.52
0.69
0.64
0.59
4.36
0.0011
0.0022
0.0053
0.05
0.013


2555411
0.64
0.0008
1.46
0.62
0.0007
0.62
0.62
0.63
0.62
5.58
0.0008
0.0008
0.0007
0.15
0.016


2555416
0.64
0.0004
1.27
0.62
0.0007
0.53
0.71
0.66
0.6
5.26
0.0006
0.0007
0.0008
0.2
0.039


2555507
0.61
0.0068
1.25
0.53
0.2618
0.3
0.78
0.58
0.52
4.25
0.2445
0.0242
0.0249
0.19
0.039


2555522
0.62
0.0026
1.26
0.62
0.0007
0.69
0.55
0.61
0.64
5.18
0.0018
0.0044
0.004
0.07
0.03


2556229
0.62
0.0024
1.39
0.6
0.0064
0.52
0.67
0.62
0.58
4.22
0.0064
0.0048
0.0049
0.17
0.037


2558208
0.62
0.003
1.26
0.6
0.0064
0.5
0.7
0.63
0.58
4.27
0.0027
0.0032
0.0055
0.01
0.021


2558313
0.65
0.0003
1.28
0.63
0.0004
0.55
0.7
0.66
0.61
5.59
0.0003
0.0003
0.0003
0.01
0.002


2558519
0.63
0.002
1.35
0.64
0.0001
0.61
0.66
0.65
0.63
5.68
0.0001
0.0015
0.0015
0.21
0.018


2559293
0.65
0.0004
1.27
0.63
0.0004
0.52
0.73
0.67
0.6
5.19
0.0002
0.0004
0.0008
0.03
0.02


2562334
0.65
0.0004
1.3
0.65
0
0.66
0.63
0.65
0.65
6.84
0
0.0003
0.0003
0.02
0.004


2565264
0.64
0.0006
1.33
0.64
0.0001
0.68
0.6
0.64
0.65
7.48
0.0001
0.0005
0.0003
0.02
0.001


2575142
0.6
0.0129
1.32
0.58
0.0197
0.5
0.66
0.61
0.57
4.65
0.0195
0.0287
0.019
0.06
0.016


2577959
0.64
0.0009
1.27
0.59
0.0138
0.48
0.7
0.62
0.57
3.97
0.0115
0.0024
0.0026
0.06
0.022


2581588
0.61
0.0061
1.28
0.57
0.038
0.54
0.6
0.59
0.56
4.26
0.0358
0.0105
0.0101
0.06
0.027


2583054
0.64
0.0009
1.28
0.62
0.0011
0.65
0.58
0.62
0.62
6.29
0.0018
0.0014
0.0009
0.03
0.003


2583056
0.65
0.0003
1.35
0.65
0
0.62
0.67
0.66
0.63
4.37
0.0001
0.0016
0.0006
0.12
0.009


2583249
0.61
0.0102
1.31
0.59
0.0138
0.5
0.67
0.61
0.57
4.69
0.0143
0.009
0.0093
0.06
0.017


2583609
0.6
0.012
1.32
0.59
0.0138
0.54
0.63
0.6
0.57
5.38
0.0137
0.0112
0.0102
0.1
0.025


2584845
0.64
0.001
1.3
0.63
0.0004
0.63
0.62
0.63
0.62
6
0.0002
0.0006
0.0013
0.01
0.004


2588838
0.61
0.0058
1.27
0.57
0.038
0.51
0.63
0.59
0.56
5.09
0.0173
0.0064
0.0114
0.18
0.11


2590750
0.64
0.0008
1.42
0.64
0.0001
0.59
0.68
0.66
0.62
5.38
0
0.0011
0.0014
0.02
0.014


2590802
0.62
0.0046
1.51
0.65
0
0.6
0.69
0.67
0.63
7
0
0.0023
0.0027
0.07
0.011


2591635
0.6
0.0145
1.25
0.6
0.0042
0.6
0.6
0.61
0.6
6.9
0.0046
0.0107
0.017
0.18
0.053


2591638
0.61
0.0052
1.36
0.62
0.0011
0.53
0.7
0.65
0.59
6.82
0.0005
0.0027
0.0054
0.09
0.016


2593447
0.61
0.0059
1.32
0.58
0.0197
0.5
0.67
0.61
0.56
4.62
0.0131
0.0105
0.0139
0.11
0.031


2593692
0.61
0.0064
1.35
0.58
0.0197
0.54
0.62
0.6
0.57
5.2
0.0159
0.006
0.0044
0.02
0.002


2593714
0.61
0.0093
1.31
0.59
0.0095
0.51
0.67
0.62
0.57
4.97
0.0075
0.0075
0.0121
0.11
0.03


2593758
0.61
0.0063
1.53
0.63
0.0004
0.66
0.59
0.63
0.63
4.96
0.0002
0.0023
0.004
0.07
0.029


2594506
0.61
0.0077
1.31
0.61
0.0018
0.51
0.71
0.65
0.59
4.28
0.0016
0.0292
0.0191
0.33
0.084


2596691
0.63
0.0017
1.28
0.63
0.0004
0.69
0.56
0.62
0.64
4.81
0.0007
0.0048
0.0028
0.03
0.005


2597013
0.64
0.0009
1.28
0.61
0.0028
0.56
0.65
0.63
0.59
4.94
0.0039
0.0014
0.001
0.02
0.003


2598267
0.6
0.0108
1.25
0.6
0.0042
0.61
0.59
0.61
0.6
6.26
0.0053
0.0044
0.0126
0.07
0.026


2598289
0.63
0.002
1.29
0.58
0.0197
0.47
0.7
0.62
0.56
5.73
0.0298
0.0015
0.0035
0.02
0.004


2598781
0.63
0.0021
1.26
0.64
0.0001
0.68
0.59
0.63
0.64
8.61
0.0002
0.0027
0.0024
0.09
0.007


2599342
0.61
0.0055
1.4
0.6
0.0042
0.51
0.69
0.63
0.58
5.58
0.005
0.0074
0.0064
0.05
0.01


2599903
0.61
0.0085
1.37
0.59
0.0138
0.51
0.66
0.61
0.57
4.45
0.0279
0.0131
0.0066
0.17
0.017


2606647
0.6
0.0122
1.25
0.58
0.0276
0.61
0.54
0.58
0.58
6.59
0.0576
0.0127
0.0076
0.18
0.019


2607152
0.62
0.0037
1.3
0.61
0.0018
0.58
0.64
0.63
0.6
6.07
0.0039
0.0044
0.004
0.14
0.024


2607374
0.6
0.012
1.34
0.56
0.0889
0.42
0.7
0.59
0.54
5.08
0.0849
0.026
0.0232
0.06
0.042


2609635
0.62
0.003
1.3
0.61
0.0028
0.63
0.58
0.61
0.61
4.58
0.003
0.0027
0.0032
0.08
0.019


2609657
0.63
0.0021
1.36
0.63
0.0004
0.53
0.72
0.67
0.6
5.28
0.0002
0.0012
0.0018
0.06
0.023


2609668
0.61
0.0055
1.25
0.61
0.0028
0.62
0.59
0.61
0.6
5.62
0.0024
0.0041
0.0082
0.12
0.038


2610353
0.6
0.0138
1.33
0.6
0.0064
0.6
0.59
0.6
0.59
5.54
0.0054
0.0091
0.012
0.2
0.055


2611083
0.62
0.0037
1.26
0.6
0.0064
0.42
0.79
0.67
0.57
5.68
0.0019
0.002
0.0032
0.25
0.04


2614100
0.61
0.0051
1.33
0.62
0.0007
0.53
0.71
0.66
0.6
5.7
0.0002
0.0025
0.0052
0.02
0.01


2614135
0.65
0.0003
1.33
0.61
0.0028
0.53
0.68
0.64
0.59
5.24
0.0038
0.0006
0.0006
0.05
0.002


2614137
0.61
0.0082
1.32
0.6
0.0064
0.53
0.66
0.62
0.58
5.83
0.0051
0.007
0.006
0.14
0.036


2615656
0.63
0.0013
1.33
0.6
0.0064
0.53
0.66
0.62
0.58
5.53
0.0034
0.0032
0.003
0.07
0.024


2616071
0.63
0.0019
1.46
0.62
0.0011
0.53
0.7
0.65
0.59
4.56
0.0005
0.0018
0.0024
0.05
0.018


2616248
0.62
0.0026
1.32
0.6
0.0064
0.52
0.67
0.62
0.58
4.93
0.0108
0.0114
0.0044
0.48
0.04


2617578
0.61
0.0057
1.33
0.59
0.0095
0.68
0.5
0.58
0.6
5.79
0.018
0.011
0.0056
0.16
0.012


2618656
0.63
0.0014
1.36
0.61
0.0018
0.68
0.54
0.61
0.62
5.73
0.0025
0.0022
0.0013
0.02
0.002


2619365
0.63
0.0011
1.34
0.62
0.0011
0.58
0.65
0.63
0.6
4.86
0.0012
0.0023
0.0025
0.13
0.03


2625632
0.65
0.0004
1.3
0.6
0.0042
0.59
0.61
0.61
0.59
4.15
0.0049
0.0009
0.0006
0.04
0.004


2625643
0.65
0.0002
1.33
0.62
0.0007
0.58
0.66
0.64
0.61
5.84
0.0008
0.0004
0.0003
0.06
0.005


2625893
0.64
0.0007
1.37
0.58
0.0276
0.44
0.72
0.62
0.55
3.76
0.0209
0.0035
0.003
0.02
0.01


2627951
0.67
0
1.33
0.63
0.0002
0.5
0.77
0.69
0.6
4.23
0.0001
0.0002
0.0002
0.01
0.001


2633534
0.63
0.0014
1.25
0.57
0.038
0.43
0.72
0.61
0.55
4.54
0.0237
0.0035
0.003
0.01
0.004


2633651
0.63
0.0021
1.27
0.62
0.0011
0.55
0.68
0.64
0.6
5.83
0.0011
0.0034
0.0027
0.03
0.004


2638377
0.63
0.0018
1.26
0.58
0.0276
0.48
0.68
0.61
0.56
4.37
0.015
0.0052
0.0046
0.05
0.014


2638451
0.62
0.0048
1.29
0.62
0.0011
0.62
0.61
0.62
0.61
7.12
0.0011
0.0033
0.0028
0.1
0.013


2638452
0.61
0.0067
1.32
0.6
0.0064
0.67
0.52
0.59
0.61
6.87
0.0087
0.005
0.0036
0.03
0.006


2641575
0.61
0.0097
1.28
0.6
0.0064
0.56
0.63
0.61
0.58
5.25
0.0063
0.0196
0.0121
0.16
0.047


2643579
0.62
0.0045
1.28
0.6
0.0064
0.53
0.66
0.62
0.58
4.81
0.0052
0.0038
0.0044
0.23
0.093


2645294
0.65
0.0002
1.46
0.66
0
0.6
0.71
0.69
0.64
5.72
0
0.0001
0.0001
0.03
0.003


2646066
0.61
0.0088
1.25
0.62
0.0007
0.65
0.59
0.62
0.62
5.06
0.0009
0.0173
0.0143
0.08
0.023


2646085
0.64
0.0007
1.51
0.63
0.0004
0.67
0.58
0.62
0.63
5.34
0.0005
0.0005
0.0005
0.05
0.004


2647361
0.63
0.0011
1.36
0.63
0.0004
0.54
0.71
0.66
0.6
5.39
0.0003
0.002
0.0016
0.29
0.087


2647678
0.65
0.0003
1.3
0.64
0.0001
0.54
0.73
0.68
0.61
4.48
0
0.0003
0.0007
0
0.003


2647775
0.6
0.0125
1.32
0.6
0.0042
0.52
0.68
0.63
0.58
5.37
0.0011
0.0055
0.0089
0.4
0.074


2647779
0.62
0.0042
1.3
0.6
0.0042
0.55
0.65
0.62
0.59
4.39
0.0024
0.0018
0.0045
0
0.002


2648202
0.62
0.0028
1.27
0.63
0.0004
0.65
0.6
0.63
0.63
4.61
0.0004
0.0084
0.0074
0.15
0.054


2651521
0.66
0.0001
1.31
0.64
0.0001
0.56
0.71
0.67
0.61
4.58
0
0.0001
0.0002
0.06
0.005


2652021
0.65
0.0004
1.47
0.63
0.0004
0.54
0.71
0.66
0.6
5.18
0.0004
0.0004
0.0006
0.06
0.008


2654335
0.66
0.0002
1.41
0.61
0.0018
0.51
0.71
0.65
0.59
5.41
0.0005
0.0002
0.0002
0.04
0.003


2654874
0.64
0.0008
1.3
0.65
0
0.63
0.67
0.67
0.64
5.77
0
0.0021
0.001
0.11
0.012


2654878
0.61
0.0102
1.25
0.55
0.1438
0.42
0.68
0.58
0.53
4.05
0.1136
0.0115
0.0178
0.12
0.042


2655475
0.66
0.0001
1.34
0.63
0.0004
0.59
0.66
0.65
0.61
5.11
0.0002
0.0001
0.0001
0.02
0.002


2655509
0.64
0.0008
1.27
0.61
0.0028
0.63
0.58
0.61
0.61
8.77
0.0046
0.0008
0.0008
0.02
0.002


2655678
0.61
0.0062
1.26
0.61
0.0028
0.59
0.62
0.62
0.6
5.74
0.0011
0.003
0.0057
0.05
0.018


2656791
0.64
0.001
1.25
0.61
0.0018
0.65
0.57
0.61
0.62
7.16
0.0018
0.0013
0.0009
0.06
0.005


2658354
0.64
0.0009
1.26
0.66
0
0.63
0.68
0.67
0.64
5.21
0
0.0019
0.0013
0.23
0.039


2658632
0.66
0.0001
1.33
0.65
0
0.66
0.64
0.66
0.65
4.88
0
0
0.0001
0.02
0.002


2663553
0.61
0.0056
1.4
0.61
0.0018
0.5
0.73
0.66
0.59
4.84
0.0002
0.0024
0.0065
0.08
0.092


2666503
0.61
0.0086
1.34
0.63
0.0002
0.58
0.68
0.66
0.61
5.98
0.0002
0.0068
0.0069
0.45
0.125


2666519
0.62
0.0027
1.26
0.62
0.0007
0.52
0.72
0.66
0.6
6.48
0.0007
0.003
0.0025
0.28
0.053


2666524
0.62
0.003
1.42
0.6
0.0064
0.54
0.65
0.62
0.58
4.57
0.0053
0.0014
0.0021
0.21
0.036


2669316
0.6
0.0107
1.45
0.61
0.0028
0.55
0.66
0.63
0.59
4.88
0.0028
0.008
0.0072
0.34
0.119


2669571
0.64
0.001
1.33
0.63
0.0004
0.59
0.66
0.65
0.61
5.12
0.0011
0.0057
0.0023
0.07
0.012


2670438
0.62
0.0034
0.79
0.37
1
0.43
0.32
0.39
0.35
4.25
0.0015
0.0286
0.0075
0.28
0.004


2672775
0.61
0.0088
1.43
0.59
0.0095
0.63
0.55
0.59
0.59
4.95
0.0084
0.0064
0.0081
0.11
0.022


2674243
0.6
0.0141
1.33
0.62
0.0007
0.71
0.53
0.61
0.64
5.72
0.0008
0.0118
0.009
0.08
0.008


2675269
0.62
0.0041
1.39
0.58
0.0276
0.48
0.68
0.61
0.56
4.13
0.017
0.0135
0.0141
0.2
0.045


2675802
0.62
0.0039
1.34
0.61
0.0018
0.58
0.64
0.63
0.6
5.78
0.0016
0.0034
0.0028
0.13
0.032


2676931
0.6
0.0124
1.33
0.6
0.0042
0.59
0.61
0.61
0.59
6.33
0.0046
0.0174
0.0107
0.28
0.029


2677655
0.63
0.0015
1.31
0.65
0
0.66
0.64
0.66
0.65
5.9
0
0.0031
0.0013
0.14
0.006


2677695
0.68
0
1.37
0.61
0.0028
0.48
0.74
0.66
0.58
4.48
0.0007
0
0.0001
0
0


2680511
0.62
0.0024
1.26
0.63
0.0004
0.6
0.65
0.64
0.62
3.39
0.0001
0.0064
0.0067
0.03
0.018


2682663
0.63
0.0021
1.29
0.65
0
0.58
0.72
0.69
0.63
6.34
0
0.0023
0.0018
0.14
0.011


2685954
0.6
0.0132
1.25
0.57
0.0513
0.44
0.7
0.6
0.55
3.66
0.031
0.0321
0.0608
0.15
0.125


2691756
0.64
0.0007
1.27
0.62
0.0007
0.6
0.64
0.64
0.61
4.72
0.0003
0.0011
0.0011
0
0.001


2692111
0.64
0.0004
1.51
0.64
0.0001
0.59
0.68
0.66
0.62
5.09
0.0001
0.0009
0.0006
0.03
0.009


2694407
0.65
0.0004
1.28
0.59
0.0138
0.54
0.63
0.6
0.57
4
0.0096
0.0005
0.001
0.02
0.008


2694648
0.62
0.0049
1.33
0.6
0.0042
0.64
0.56
0.6
0.6
5.51
0.0049
0.0047
0.0042
0.05
0.011


2694649
0.64
0.0009
1.44
0.61
0.0018
0.61
0.61
0.62
0.61
5.62
0.0025
0.0013
0.0012
0.1
0.015


2695413
0.66
0.0001
1.25
0.62
0.0011
0.53
0.7
0.65
0.59
5.99
0.0007
0.0004
0.0002
0.07
0.005


2700507
0.62
0.0026
1.29
0.56
0.0681
0.46
0.67
0.59
0.55
5.39
0.0471
0.002
0.0035
0.13
0.146


2700829
0.64
0.0009
1.35
0.59
0.0095
0.53
0.65
0.61
0.58
5.18
0.0112
0.0027
0.0026
0.03
0.004


2701289
0.62
0.0026
1.26
0.63
0.0004
0.61
0.64
0.64
0.62
5.43
0.0004
0.0061
0.0033
0.2
0.026


2702329
0.61
0.0058
1.37
0.6
0.0042
0.57
0.63
0.62
0.59
4.76
0.0026
0.0048
0.0058
0.31
0.103


2703240
0.63
0.002
1.55
0.6
0.0064
0.47
0.73
0.64
0.57
4.57
0.0025
0.0021
0.0033
0.06
0.02


2704511
0.67
0
1.26
0.65
0
0.56
0.73
0.69
0.62
3.5
0
0
0
0.02
0.001


2704898
0.64
0.0006
1.36
0.59
0.0095
0.51
0.67
0.62
0.57
4.15
0.0071
0.0009
0.0009
0.12
0.01


2704935
0.63
0.002
1.25
0.63
0.0004
0.62
0.63
0.64
0.62
7.15
0.0003
0.0006
0.0011
0.03
0.015


2705001
0.66
0.0001
1.48
0.63
0.0002
0.58
0.68
0.66
0.61
6.26
0.0002
0
0.0001
0.01
0.001


2706322
0.61
0.0062
1.34
0.62
0.0011
0.59
0.64
0.63
0.61
5.01
0.0005
0.0044
0.0053
0.24
0.057


2706324
0.61
0.0103
1.29
0.61
0.0028
0.58
0.63
0.62
0.6
6.1
0.0029
0.0068
0.0076
0.09
0.014


2707780
0.62
0.0029
1.35
0.59
0.0095
0.55
0.63
0.61
0.58
5.34
0.0181
0.003
0.003
0.21
0.033


2708798
0.64
0.0007
1.33
0.62
0.0007
0.65
0.59
0.62
0.62
7.58
0.0012
0.0015
0.0017
0.07
0.007


2709489
0.64
0.0006
1.33
0.62
0.0007
0.54
0.7
0.65
0.6
5.65
0.0001
0.0012
0.0013
0.03
0.011


2710214
0.62
0.0049
1.26
0.59
0.0095
0.52
0.66
0.62
0.58
4.4
0.0132
0.0067
0.0045
0.59
0.087


2710217
0.67
0
1.37
0.64
0.0001
0.49
0.81
0.72
0.6
5.18
0
0
0
0.06
0.002


2711689
0.62
0.0029
1.26
0.6
0.0064
0.5
0.69
0.63
0.58
4.5
0.0032
0.0015
0.0042
0.06
0.035


2712424
0.62
0.0041
1.29
0.62
0.0011
0.64
0.59
0.62
0.62
6.2
0.0015
0.0033
0.003
0.11
0.012


2713075
0.61
0.0078
1.36
0.61
0.0028
0.64
0.57
0.61
0.61
6.22
0.0019
0.0061
0.0057
0.11
0.017


2713262
0.64
0.0007
1.31
0.64
0.0001
0.58
0.69
0.66
0.62
4.43
0.0001
0.0008
0.0014
0.05
0.011


2713269
0.66
0.0001
1.35
0.62
0.0007
0.54
0.7
0.65
0.6
5.51
0.0003
0.0002
0.0002
0.07
0.005


2714106
0.61
0.0082
1.32
0.59
0.0095
0.54
0.64
0.61
0.58
4.38
0.0105
0.0303
0.017
0.32
0.039


2715470
0.61
0.0068
1.41
0.6
0.0064
0.66
0.53
0.59
0.6
5.57
0.0084
0.006
0.005
0.07
0.009


2715717
0.62
0.0027
1.58
0.61
0.0028
0.67
0.54
0.6
0.62
5.55
0.003
0.0036
0.0026
0.06
0.007


2720693
0.63
0.0014
1.37
0.59
0.0138
0.43
0.76
0.64
0.56
4.6
0.0053
0.0039
0.0035
0.12
0.065


2724050
0.64
0.0008
1.28
0.61
0.0028
0.5
0.71
0.65
0.58
5.76
0.0009
0.001
0.0012
0.05
0.012


2724565
0.66
0.0001
1.29
0.62
0.0011
0.65
0.58
0.62
0.62
8.25
0.0011
0.0001
0.0001
0.02
0.003


2726514
0.64
0.0005
1.34
0.61
0.0028
0.55
0.66
0.63
0.59
4.4
0.0022
0.0026
0.0013
0.05
0.006


2727970
0.62
0.0039
1.49
0.63
0.0004
0.63
0.62
0.63
0.62
5.1
0.0004
0.0037
0.0023
0.11
0.02


2730701
0.63
0.0014
1.27
0.58
0.0276
0.5
0.66
0.6
0.56
4.34
0.0546
0.0052
0.0028
0.16
0.025


2731872
0.61
0.0067
1.31
0.58
0.0197
0.44
0.73
0.63
0.56
4.68
0.0137
0.0064
0.006
0.15
0.039


2732403
0.62
0.0029
1.34
0.6
0.0064
0.59
0.6
0.61
0.59
4.85
0.0092
0.0024
0.0043
0.07
0.037


2735017
0.64
0.0005
1.37
0.59
0.0095
0.47
0.72
0.64
0.57
5.03
0.0071
0.0023
0.0012
0.41
0.085


2736295
0.63
0.0015
1.26
0.57
0.038
0.47
0.68
0.6
0.55
4.72
0.0306
0.0028
0.0034
0.16
0.058


2738963
0.62
0.0029
1.27
0.6
0.0042
0.54
0.66
0.63
0.59
5.3
0.0058
0.0042
0.0039
0.05
0.01


2743194
0.67
0
1.29
0.65
0
0.66
0.63
0.65
0.65
6.83
0.0001
0
0.0001
0.01
0.001


2744632
0.6
0.0148
1.25
0.6
0.0042
0.49
0.72
0.64
0.58
4.28
0.0023
0.0143
0.0221
0.19
0.352


2745687
0.61
0.0063
1.28
0.6
0.0064
0.54
0.65
0.62
0.58
5.03
0.0098
0.0112
0.008
0.22
0.035


2754300
0.64
0.0009
1.3
0.61
0.0018
0.52
0.7
0.65
0.59
4.52
0.0033
0.0064
0.0023
0.45
0.075


2757037
0.62
0.0027
1.29
0.62
0.0011
0.7
0.53
0.61
0.63
7.15
0.0011
0.0031
0.0035
0.04
0.005


2763813
0.6
0.0108
1.35
0.58
0.0197
0.45
0.72
0.63
0.56
4.04
0.0062
0.0072
0.0128
0.18
0.15


2766634
0.64
0.0006
1.31
0.63
0.0002
0.65
0.61
0.63
0.63
4.74
0.0004
0.0013
0.0013
0.08
0.014


2770195
0.6
0.0144
1.25
0.54
0.2178
0.45
0.63
0.56
0.53
3.41
0.3483
0.0313
0.0237
0.19
0.027


2770473
0.63
0.0012
1.29
0.62
0.0007
0.57
0.67
0.64
0.61
6.83
0.0008
0.0014
0.0009
0.21
0.02


2771759
0.63
0.0022
1.27
0.6
0.0042
0.52
0.68
0.63
0.58
5.04
0.0084
0.0049
0.0025
0.04
0.005


2773129
0.63
0.0011
1.34
0.59
0.0138
0.62
0.55
0.59
0.59
4.18
0.0179
0.0023
0.0014
0.12
0.027


2774054
0.62
0.0048
1.33
0.6
0.0042
0.49
0.72
0.64
0.58
4.26
0.0032
0.0173
0.0105
0.17
0.023


2775592
0.62
0.0034
1.26
0.6
0.0042
0.59
0.61
0.61
0.59
5.07
0.0035
0.0017
0.0031
0.12
0.046


2775758
0.61
0.007
1.32
0.62
0.0011
0.7
0.53
0.61
0.63
6.83
0.0015
0.0111
0.0091
0.13
0.015


2776094
0.61
0.0083
1.27
0.6
0.0064
0.51
0.68
0.63
0.58
4.3
0.0137
0.0369
0.0113
0.2
0.01


2777492
0.6
0.0141
1.27
0.56
0.0889
0.39
0.73
0.6
0.54
4.01
0.0641
0.0153
0.0223
0.22
0.077


2779488
0.63
0.0012
1.25
0.63
0.0004
0.61
0.64
0.64
0.62
6.49
0.0003
0.0009
0.0011
0.04
0.006


2779639
0.63
0.0014
1.45
0.61
0.0018
0.63
0.59
0.62
0.61
5.62
0.0018
0.0019
0.0012
0.05
0.005


2779995
0.61
0.0056
1.26
0.61
0.0028
0.56
0.65
0.63
0.59
5.44
0.0037
0.005
0.0035
0.12
0.014


2780545
0.62
0.0033
1.4
0.61
0.0028
0.55
0.66
0.63
0.59
4.57
0.0035
0.0062
0.0052
0.17
0.037


2783475
0.64
0.0006
1.32
0.64
0.0001
0.73
0.54
0.62
0.66
6.56
0.0003
0.0012
0.0005
0.05
0.001


2789554
0.61
0.0079
1.27
0.59
0.0095
0.5
0.69
0.63
0.57
5.86
0.0085
0.0066
0.0081
0.1
0.072


2790573
0.61
0.0069
1.28
0.61
0.0018
0.65
0.57
0.61
0.62
6.28
0.0029
0.0076
0.0037
0.04
0.004


2797449
0.64
0.0007
1.28
0.62
0.0007
0.55
0.69
0.65
0.6
6.42
0.0004
0.0011
0.0009
0.07
0.013


2801338
0.62
0.0034
1.43
0.61
0.0028
0.52
0.69
0.64
0.59
4.71
0.0012
0.0021
0.0032
0.12
0.045


2801556
0.63
0.0022
1.3
0.61
0.0028
0.64
0.57
0.61
0.61
6.84
0.0027
0.0014
0.0016
0.01
0.004


2801679
0.63
0.0014
1.32
0.61
0.0028
0.61
0.6
0.61
0.6
6.25
0.0027
0.0007
0.0014
0.01
0.005


2802506
0.64
0.0004
1.3
0.63
0.0004
0.62
0.63
0.64
0.62
4.57
0.0001
0.0002
0.001
0.01
0.017


2805739
0.62
0.004
1.28
0.59
0.0095
0.5
0.68
0.62
0.57
4.4
0.0082
0.006
0.0061
0.09
0.024


2806859
0.66
0.0001
1.28
0.62
0.0007
0.54
0.7
0.65
0.6
6.23
0.0004
0.0001
0.0001
0.01
0.002


2806912
0.62
0.0032
1.3
0.6
0.0042
0.53
0.67
0.63
0.58
6.08
0.0043
0.0037
0.003
0.14
0.019


2807658
0.64
0.0005
1.27
0.6
0.0064
0.5
0.69
0.63
0.58
5.22
0.0033
0.0007
0.0008
0.07
0.008


2809146
0.61
0.0071
1.43
0.62
0.0011
0.61
0.62
0.63
0.61
5.52
0.0018
0.0083
0.0055
0.14
0.037


2810487
0.6
0.0114
1.26
0.61
0.0028
0.55
0.66
0.63
0.59
4.07
0.0007
0.0066
0.0152
0.3
0.315


2812307
0.61
0.0075
1.37
0.59
0.0138
0.5
0.67
0.61
0.57
4.53
0.0223
0.0159
0.0104
0.13
0.02


2812500
0.63
0.0017
1.33
0.57
0.038
0.46
0.69
0.61
0.55
3.64
0.0507
0.0039
0.0034
0.17
0.023


2812573
0.63
0.0013
1.25
0.6
0.0064
0.6
0.59
0.6
0.59
7.18
0.0067
0.0014
0.0011
0.07
0.006


2817404
0.61
0.0067
1.49
0.61
0.0028
0.53
0.68
0.64
0.59
4.52
0.0034
0.009
0.007
0.29
0.036


2817457
0.64
0.0007
1.5
0.6
0.0064
0.51
0.68
0.63
0.58
5.07
0.0037
0.0015
0.0011
0.03
0.007


2818271
0.6
0.0132
1.25
0.63
0.0002
0.57
0.69
0.66
0.61
6.77
0.0002
0.022
0.0269
0.47
0.07


2818964
0.63
0.0019
1.37
0.63
0.0002
0.71
0.55
0.62
0.65
6.65
0.0002
0.0025
0.002
0.06
0.006


2822274
0.6
0.0113
1.43
0.58
0.0276
0.5
0.66
0.6
0.56
5.18
0.0299
0.0195
0.0143
0.15
0.035


2823066
0.64
0.0007
1.33
0.61
0.0028
0.44
0.79
0.68
0.57
3.93
0.0011
0.0034
0.0021
0.24
0.062


2823854
0.61
0.0066
1.43
0.6
0.0042
0.62
0.58
0.61
0.6
6.28
0.003
0.0028
0.0036
0.09
0.026


2824899
0.63
0.0021
1.31
0.61
0.0028
0.52
0.69
0.64
0.59
4.62
0.0015
0.0025
0.0045
0.1
0.034


2828112
0.63
0.002
1.54
0.62
0.0007
0.66
0.58
0.62
0.63
5.66
0.0006
0.0016
0.0019
0.04
0.007


2828637
0.6
0.0123
1.3
0.61
0.0018
0.55
0.67
0.64
0.59
5.38
0.0004
0.0021
0.007
0.13
0.068


2828642
0.63
0.0019
1.42
0.59
0.0095
0.53
0.65
0.61
0.58
4.58
0.0105
0.002
0.0024
0.13
0.023


2829255
0.64
0.0008
1.28
0.62
0.0011
0.47
0.78
0.68
0.58
5.09
0.0007
0.0012
0.0011
0.09
0.024


2829555
0.61
0.0076
1.26
0.59
0.0095
0.48
0.71
0.63
0.57
5.17
0.0037
0.0043
0.0066
0.12
0.058


2829679
0.62
0.0037
1.26
0.61
0.0028
0.58
0.63
0.62
0.6
5.77
0.0035
0.0021
0.0024
0.05
0.007


2831231
0.62
0.0034
1.25
0.58
0.0276
0.52
0.63
0.6
0.56
6.06
0.0213
0.004
0.0045
0.1
0.034


2831557
0.63
0.0011
1.38
0.61
0.0028
0.61
0.6
0.61
0.6
6.54
0.0037
0.0009
0.0006
0.02
0.001


2836687
0.61
0.0085
1.29
0.6
0.0064
0.63
0.56
0.6
0.6
4.96
0.006
0.0061
0.0074
0.03
0.015


2840638
0.61
0.0057
1.33
0.61
0.0028
0.6
0.61
0.62
0.6
4.59
0.0023
0.0053
0.0072
0.2
0.032


2843280
0.61
0.0099
1.37
0.61
0.0028
0.64
0.57
0.61
0.61
5.82
0.0017
0.0084
0.0073
0.03
0.009


2844248
0.61
0.0103
1.38
0.62
0.0011
0.64
0.59
0.62
0.62
5.94
0.0022
0.008
0.0046
0.09
0.01


2844250
0.61
0.0063
1.36
0.59
0.0095
0.65
0.53
0.59
0.6
5.71
0.0115
0.0052
0.0043
0.1
0.014


2848258
0.62
0.0027
1.32
0.56
0.0889
0.44
0.68
0.59
0.54
5.15
0.0478
0.0024
0.0038
0.07
0.039


2848472
0.62
0.0042
1.6
0.65
0
0.63
0.66
0.66
0.64
5.69
0
0.0017
0.0018
0.03
0.009


2851973
0.64
0.0006
1.29
0.61
0.0028
0.56
0.65
0.63
0.59
4.78
0.002
0.0007
0.001
0.01
0.004


2854808
0.64
0.0009
1.58
0.63
0.0002
0.66
0.6
0.63
0.63
6.05
0.0003
0.0006
0.0008
0.05
0.007


2854809
0.63
0.0011
1.27
0.63
0.0004
0.61
0.64
0.64
0.62
8.1
0.0003
0.0006
0.0009
0.06
0.008


2855289
0.62
0.0024
1.29
0.58
0.0276
0.48
0.68
0.61
0.56
5.6
0.0568
0.0088
0.0057
0.05
0.006


2855291
0.63
0.0011
1.41
0.62
0.0011
0.53
0.7
0.65
0.59
4.74
0.0015
0.0034
0.0021
0.06
0.009


2855292
0.62
0.0044
1.27
0.62
0.0007
0.57
0.67
0.64
0.61
5.57
0.0013
0.009
0.006
0.08
0.011


2857172
0.62
0.0041
1.4
0.6
0.0064
0.58
0.61
0.61
0.59
5.05
0.0067
0.0035
0.0032
0.2
0.037


2862162
0.61
0.0079
1.28
0.62
0.0007
0.62
0.62
0.63
0.62
4.45
0.0004
0.0172
0.0192
0.16
0.049


2862377
0.61
0.0068
1.3
0.64
0.0001
0.66
0.61
0.64
0.64
7.95
0.0003
0.0059
0.0047
0.1
0.009


2865063
0.62
0.003
1.34
0.62
0.0011
0.65
0.58
0.62
0.62
6.34
0.0018
0.0028
0.0027
0.09
0.008


2868141
0.62
0.0029
1.28
0.63
0.0004
0.59
0.66
0.65
0.61
5.75
0.0002
0.0021
0.0033
0.04
0.006


2877518
0.61
0.0092
1.28
0.6
0.0042
0.62
0.58
0.61
0.6
5.41
0.0057
0.0083
0.0089
0.16
0.042


2878261
0.62
0.0029
1.29
0.63
0.0002
0.63
0.63
0.64
0.63
5.98
0.0001
0.0011
0.0025
0.05
0.015


2882121
0.63
0.001
1.26
0.6
0.0042
0.57
0.63
0.62
0.59
7.76
0.0045
0.0009
0.0015
0.04
0.004


2888344
0.6
0.0148
1.3
0.57
0.038
0.51
0.63
0.59
0.56
4.55
0.05
0.0191
0.0135
0.2
0.072


2893822
0.61
0.0089
1.26
0.59
0.0095
0.45
0.74
0.64
0.57
4.91
0.0028
0.01
0.0211
0.08
0.045


2893942
0.61
0.0078
1.31
0.58
0.0276
0.53
0.62
0.59
0.56
6.54
0.0371
0.0132
0.0084
0.14
0.019


2896978
0.62
0.0027
1.36
0.59
0.0138
0.48
0.7
0.62
0.57
4.8
0.0165
0.0112
0.0042
0.2
0.011


2898531
0.63
0.001
1.28
0.58
0.0276
0.67
0.48
0.57
0.59
5.33
0.0173
0.0012
0.0016
0.05
0.009


2902010
0.65
0.0003
1.26
0.63
0.0002
0.58
0.68
0.66
0.61
6.44
0.0002
0.0002
0.0003
0.05
0.005


2902011
0.62
0.0024
1.45
0.63
0.0004
0.68
0.57
0.62
0.64
5.66
0.0007
0.0014
0.0013
0.07
0.01


2905137
0.63
0.0022
1.31
0.6
0.0042
0.47
0.74
0.65
0.57
4.98
0.002
0.0011
0.0016
0.01
0.002


2906968
0.61
0.0101
1.28
0.6
0.0064
0.57
0.62
0.61
0.59
5.8
0.0118
0.0121
0.0081
0.15
0.011


2908048
0.62
0.0041
1.27
0.62
0.0011
0.7
0.53
0.61
0.63
4.51
0.0008
0.005
0.0058
0.07
0.031


2909471
0.6
0.014
1.26
0.58
0.0276
0.55
0.6
0.59
0.57
5
0.0413
0.0243
0.019
0.28
0.07


2910489
0.63
0.0015
1.25
0.61
0.0028
0.6
0.61
0.62
0.6
5.4
0.0045
0.0036
0.0026
0.05
0.008


2914002
0.64
0.0008
1.31
0.59
0.0095
0.47
0.72
0.64
0.57
4.56
0.0045
0.0015
0.0016
0.02
0.003


2914107
0.67
0
1.26
0.65
0
0.54
0.76
0.7
0.62
4.52
0.0001
0.0006
0.0006
0.06
0.009


2916383
0.61
0.0088
1.26
0.58
0.0197
0.62
0.54
0.58
0.58
5.79
0.0218
0.0129
0.0103
0.37
0.063


2916976
0.61
0.0055
1.26
0.59
0.0095
0.48
0.71
0.63
0.57
4.23
0.003
0.007
0.0089
0.16
0.036


2918543
0.63
0.0012
1.3
0.62
0.0007
0.6
0.64
0.64
0.61
4.74
0.0004
0.0036
0.0022
0.09
0.012


2918547
0.64
0.0006
1.38
0.61
0.0018
0.58
0.64
0.63
0.6
6.5
0.0013
0.0005
0.0005
0.04
0.003


2922232
0.63
0.0014
1.27
0.6
0.0042
0.5
0.71
0.64
0.58
5.15
0.003
0.0058
0.003
0.42
0.047


2922235
0.61
0.0052
1.27
0.59
0.0095
0.49
0.7
0.63
0.57
4.54
0.0118
0.0449
0.0191
0.14
0.024


2926222
0.64
0.0005
1.42
0.62
0.0007
0.65
0.59
0.62
0.62
7.41
0.0007
0.0005
0.0004
0.03
0.002


2929946
0.63
0.0021
1.28
0.61
0.0028
0.5
0.71
0.65
0.58
5.67
0.0008
0.0018
0.0024
0.11
0.034


2930652
0.64
0.0009
1.3
0.61
0.0018
0.6
0.62
0.62
0.6
6.46
0.0023
0.0023
0.001
0.17
0.016


2932399
0.63
0.0022
1.25
0.6
0.0064
0.51
0.68
0.63
0.58
4.77
0.0094
0.0045
0.0023
0.22
0.047


2932428
0.61
0.0057
1.37
0.58
0.0276
0.48
0.68
0.61
0.56
4.49
0.0327
0.0118
0.0092
0.14
0.043


2933660
0.64
0.0005
1.26
0.66
0
0.65
0.66
0.67
0.65
5.65
0
0.0009
0.0009
0.17
0.023


2936963
0.6
0.0118
1.31
0.57
0.0513
0.44
0.7
0.6
0.55
3.91
0.0437
0.0364
0.0354
0.56
0.204


2940827
0.62
0.0039
1.3
0.6
0.0064
0.57
0.62
0.61
0.59
5.47
0.0054
0.0081
0.0057
0.1
0.013


2942512
0.63
0.0014
1.26
0.58
0.0197
0.5
0.67
0.61
0.56
6.1
0.0094
0.0033
0.0028
0.09
0.032


2944070
0.63
0.0014
1.54
0.61
0.0018
0.6
0.62
0.62
0.6
5.64
0.0011
0.0019
0.0016
0.16
0.033


2944963
0.66
0.0001
1.27
0.62
0.0007
0.57
0.67
0.64
0.61
7.12
0.0008
0.0003
0.0003
0.02
0.002


2946479
0.63
0.0012
1.28
0.6
0.0042
0.5
0.7
0.64
0.58
4.37
0.0049
0.0062
0.0046
0.2
0.041


2947592
0.64
0.0005
1.33
0.63
0.0004
0.59
0.66
0.65
0.61
4.54
0.0003
0.0003
0.0005
0
0.001


2948592
0.63
0.0013
1.3
0.61
0.0028
0.63
0.58
0.61
0.61
5.64
0.0019
0.0013
0.0012
0.06
0.008


2948596
0.6
0.0126
1.25
0.59
0.0138
0.61
0.56
0.59
0.59
4.34
0.0226
0.0211
0.0164
0.07
0.018


2949053
0.63
0.0023
1.4
0.63
0.0004
0.62
0.63
0.64
0.62
4.81
0.0002
0.0014
0.0023
0.05
0.01


2949061
0.61
0.0103
1.36
0.61
0.0028
0.56
0.65
0.63
0.59
4.82
0.0016
0.0056
0.0094
0.22
0.129


2951060
0.61
0.0083
1.26
0.6
0.0042
0.65
0.55
0.6
0.61
6.61
0.0083
0.008
0.0046
0.09
0.006


2956077
0.63
0.0022
1.28
0.6
0.0042
0.5
0.7
0.64
0.58
5.37
0.0038
0.001
0.0026
0.05
0.039


2958402
0.65
0.0002
1.32
0.61
0.0018
0.52
0.7
0.65
0.59
5.05
0.0005
0.0009
0.0016
0.04
0.026


2961302
0.61
0.0086
1.32
0.63
0.0004
0.7
0.55
0.62
0.64
5.56
0.0007
0.0083
0.0078
0.09
0.025


2966293
0.63
0.002
1.33
0.62
0.0011
0.55
0.68
0.64
0.6
4.26
0.0006
0.0023
0.0019
0.17
0.013


2966378
0.62
0.0045
1.28
0.6
0.0042
0.62
0.58
0.61
0.6
5.81
0.0052
0.008
0.0048
0.2
0.039


2967164
0.62
0.0029
1.27
0.62
0.0007
0.53
0.71
0.66
0.6
4.09
0.0005
0.0074
0.0048
0.6
0.095


2967323
0.61
0.0085
1.33
0.57
0.038
0.49
0.66
0.6
0.56
4.67
0.0674
0.0113
0.0083
0.05
0.008


2968257
0.63
0.0011
1.28
0.62
0.0007
0.62
0.62
0.63
0.62
5.01
0.0003
0.0018
0.0016
0.03
0.014


2968653
0.61
0.0055
1.33
0.6
0.0042
0.56
0.64
0.62
0.59
5.14
0.0024
0.006
0.0053
0.21
0.025


2974195
0.61
0.0079
1.26
0.62
0.0011
0.7
0.53
0.61
0.63
6.73
0.0012
0.0135
0.0134
0.1
0.016


2974332
0.61
0.0066
1.53
0.6
0.0042
0.59
0.61
0.61
0.59
4.95
0.0103
0.0105
0.0062
0.07
0.011


2975686
0.63
0.0017
1.28
0.63
0.0004
0.63
0.62
0.63
0.62
5.93
0.0008
0.0034
0.0016
0.12
0.004


2975709
0.61
0.0069
1.28
0.57
0.0513
0.5
0.63
0.59
0.55
4.81
0.0755
0.014
0.0119
0.16
0.023


2976368
0.61
0.0066
1.38
0.62
0.0007
0.55
0.69
0.65
0.6
5.16
0.0003
0.011
0.0111
0.26
0.088


2977521
0.61
0.0096
1.28
0.61
0.0018
0.7
0.52
0.6
0.63
6.52
0.0025
0.0156
0.0105
0.11
0.01


2981918
0.61
0.0091
1.4
0.59
0.0095
0.5
0.68
0.62
0.57
5.26
0.0096
0.0156
0.0111
0.05
0.018


2982323
0.61
0.0076
1.33
0.6
0.0042
0.61
0.59
0.61
0.6
6.64
0.0043
0.0078
0.0077
0.18
0.028


2982385
0.63
0.0011
1.45
0.61
0.0028
0.59
0.62
0.62
0.6
4.39
0.0093
0.0032
0.0011
0.19
0.005


2984576
0.61
0.0075
1.32
0.58
0.0197
0.51
0.65
0.6
0.57
4.1
0.0341
0.0075
0.0049
0.32
0.069


2985813
0.62
0.0044
1.43
0.6
0.0042
0.47
0.74
0.65
0.57
4.6
0.0017
0.0139
0.0132
0.45
0.127


2985965
0.65
0.0002
1.27
0.63
0.0004
0.55
0.7
0.66
0.61
6.33
0.0003
0.0004
0.0003
0.03
0.001


2988895
0.65
0.0003
1.28
0.6
0.0064
0.51
0.68
0.63
0.58
4.59
0.0042
0.0012
0.0014
0.03
0.01


2988896
0.62
0.0035
1.26
0.59
0.0138
0.73
0.44
0.57
0.61
7.15
0.0195
0.0055
0.0033
0.11
0.008


2989720
0.65
0.0004
1.33
0.61
0.0028
0.59
0.62
0.62
0.6
4.81
0.0026
0.001
0.0005
0.17
0.018


2991248
0.6
0.0125
1.26
0.59
0.0095
0.55
0.63
0.61
0.58
7.21
0.0102
0.0105
0.0087
0.61
0.119


2991263
0.66
0.0001
1.3
0.64
0.0001
0.59
0.69
0.67
0.62
7.03
0.0001
0.0004
0.0003
0.21
0.012


2991264
0.64
0.0009
1.44
0.61
0.0018
0.53
0.69
0.64
0.59
5.75
0.0016
0.0023
0.0012
0.4
0.039


2993622
0.63
0.0019
1.27
0.61
0.0028
0.64
0.57
0.61
0.61
5.13
0.0047
0.0024
0.0023
0.06
0.01


2993644
0.62
0.0038
1.34
0.62
0.0007
0.69
0.55
0.61
0.64
4.61
0.0006
0.0025
0.0037
0.03
0.013


2993659
0.67
0
1.42
0.64
0.0001
0.61
0.67
0.66
0.63
5.71
0.0001
0.0001
0.0001
0.01
0.001


2994371
0.6
0.013
1.3
0.59
0.0138
0.51
0.66
0.61
0.57
3.82
0.0373
0.0501
0.0192
0.87
0.102


2995598
0.6
0.0117
1.27
0.59
0.0138
0.53
0.64
0.61
0.57
5.35
0.0202
0.0287
0.011
0.15
0.03


2997143
0.64
0.0008
1.27
0.59
0.0138
0.49
0.69
0.62
0.57
4.85
0.0092
0.0019
0.0028
0.14
0.035


3002667
0.61
0.0053
1.27
0.61
0.0028
0.56
0.65
0.63
0.59
6.14
0.0026
0.0052
0.008
0.14
0.067


3003180
0.61
0.0068
1.29
0.57
0.038
0.5
0.65
0.6
0.56
4.11
0.0332
0.0094
0.0068
0.42
0.07


3004652
0.65
0.0002
1.41
0.6
0.0064
0.5
0.69
0.63
0.58
4.86
0.0052
0.0014
0.0007
0.08
0.006


3011652
0.61
0.0057
1.25
0.6
0.0064
0.54
0.65
0.62
0.58
6.99
0.005
0.0031
0.0033
0.07
0.01


3011846
0.6
0.0118
1.26
0.59
0.0138
0.48
0.7
0.62
0.57
4.59
0.01
0.0056
0.0081
0.18
0.093


3012405
0.66
0.0001
1.28
0.65
0
0.61
0.68
0.67
0.63
6.96
0.0001
0.0001
0.0001
0.04
0.003


3012428
0.67
0
1.29
0.64
0.0001
0.59
0.68
0.66
0.62
5.6
0.0001
0
0.0001
0.02
0.003


3012438
0.62
0.0046
1.3
0.57
0.038
0.46
0.69
0.61
0.55
4.08
0.0341
0.0025
0.0029
0.11
0.047


3012452
0.63
0.0014
1.4
0.59
0.0095
0.5
0.68
0.62
0.57
4.98
0.0071
0.0009
0.0012
0.09
0.015


3012453
0.64
0.001
1.31
0.64
0.0001
0.59
0.69
0.67
0.62
6.58
0
0.0006
0.001
0.07
0.007


3013190
0.62
0.0039
1.28
0.61
0.0018
0.5
0.73
0.66
0.59
4.85
0.0014
0.0075
0.0059
0.16
0.045


3013468
0.66
0.0001
1.4
0.63
0.0004
0.59
0.66
0.65
0.61
5.57
0.0003
0.0002
0.0001
0.05
0.006


3013685
0.62
0.0033
1.26
0.61
0.0028
0.53
0.68
0.64
0.59
5.07
0.0021
0.0046
0.0027
0.04
0.008


3014422
0.62
0.0036
1.37
0.63
0.0004
0.53
0.72
0.67
0.6
3.79
0.0002
0.0033
0.0096
0.12
0.104


3015985
0.61
0.0063
1.25
0.61
0.0028
0.64
0.57
0.61
0.61
6.89
0.0034
0.0081
0.0084
0.09
0.015


3017629
0.6
0.0114
1.28
0.55
0.1438
0.37
0.73
0.59
0.53
3.64
0.1043
0.0347
0.0366
0.22
0.076


3017826
0.6
0.0122
1.36
0.6
0.0064
0.58
0.61
0.61
0.59
5.59
0.007
0.0129
0.0081
0.05
0.006


3021760
0.66
0.0001
1.33
0.64
0.0001
0.53
0.76
0.69
0.61
4.96
0
0.0001
0.0002
0
0.002


3022682
0.62
0.0024
1.3
0.62
0.0011
0.59
0.64
0.63
0.61
6.47
0.0007
0.0035
0.0022
0.02
0.002


3027555
0.63
0.0017
1.55
0.63
0.0004
0.7
0.55
0.62
0.64
6.41
0.0004
0.001
0.0009
0.02
0.002


3027926
0.63
0.0018
1.31
0.62
0.0007
0.56
0.68
0.65
0.6
5.93
0.0005
0.0013
0.0017
0.06
0.016


3027936
0.62
0.0049
1.34
0.61
0.0018
0.72
0.5
0.6
0.64
6.19
0.0027
0.0043
0.0024
0.11
0.013


3037391
0.63
0.0019
1.36
0.59
0.0095
0.47
0.72
0.64
0.57
4.16
0.0082
0.0159
0.0093
0.23
0.036


3037406
0.63
0.0022
1.3
0.63
0.0002
0.71
0.55
0.62
0.65
7.23
0.0004
0.0017
0.0021
0.02
0.004


3037950
0.61
0.0088
1.45
0.59
0.0138
0.53
0.64
0.61
0.57
3.82
0.0091
0.0095
0.0132
0.03
0.016


3039980
0.63
0.0011
1.37
0.64
0.0001
0.62
0.65
0.65
0.63
6.37
0.0001
0.0007
0.0009
0.15
0.016


3039983
0.6
0.0108
1.39
0.59
0.0138
0.58
0.59
0.6
0.58
5.64
0.0152
0.0074
0.006
0.44
0.07


3040116
0.64
0.001
1.43
0.64
0.0001
0.56
0.72
0.68
0.62
4.91
0
0.0011
0.0009
0.32
0.033


3041262
0.65
0.0004
1.43
0.63
0.0004
0.62
0.63
0.64
0.62
6.49
0.0003
0.0003
0.0003
0.06
0.003


3042004
0.62
0.005
1.35
0.62
0.0007
0.6
0.64
0.64
0.61
5.41
0.0007
0.0084
0.0067
0.29
0.039


3042424
0.63
0.0015
1.63
0.63
0.0002
0.63
0.63
0.64
0.63
5.85
0.0002
0.0012
0.001
0.06
0.004


3042426
0.62
0.0048
1.28
0.62
0.0011
0.61
0.62
0.63
0.61
6.11
0.0011
0.0035
0.0035
0.09
0.008


3042429
0.63
0.0017
1.27
0.59
0.0095
0.5
0.68
0.62
0.57
4.85
0.0061
0.0038
0.0043
0.32
0.123


3042430
0.64
0.0007
1.55
0.61
0.0028
0.62
0.59
0.61
0.6
5.62
0.0028
0.0009
0.0006
0.1
0.008


3042437
0.67
0.0001
1.35
0.66
0
0.64
0.67
0.67
0.65
6.81
0
0.0001
0.0001
0.01
0


3042453
0.64
0.0008
1.29
0.6
0.0064
0.49
0.71
0.64
0.57
3.84
0.0035
0.0021
0.0037
0.05
0.059


3048780
0.63
0.002
1.51
0.61
0.0018
0.62
0.6
0.62
0.61
4.61
0.0014
0.0025
0.0024
0.06
0.012


3048870
0.66
0.0001
1.36
0.62
0.0007
0.53
0.71
0.66
0.6
5.06
0.0003
0.0004
0.0002
0.01
0.002


3053384
0.68
0
1.58
0.64
0.0001
0.54
0.74
0.69
0.61
3.95
0
0
0
0.03
0.005


3056395
0.64
0.0005
1.27
0.64
0.0001
0.64
0.63
0.64
0.63
7.15
0.0001
0.0005
0.0006
0.05
0.011


3060052
0.64
0.0006
1.29
0.58
0.0276
0.44
0.72
0.62
0.55
3.77
0.0132
0.0022
0.0025
0.12
0.02


3061054
0.64
0.0007
1.26
0.62
0.0011
0.51
0.72
0.66
0.59
4.72
0.0005
0.0024
0.0014
0.14
0.011


3061144
0.62
0.0037
1.41
0.61
0.0028
0.52
0.69
0.64
0.59
4.89
0.002
0.0053
0.0065
0.07
0.027


3061758
0.64
0.0006
1.3
0.63
0.0002
0.58
0.68
0.66
0.61
5.26
0.0001
0.0011
0.0032
0.05
0.029


3062023
0.64
0.0006
1.26
0.64
0.0001
0.55
0.73
0.68
0.62
5.86
0
0.0002
0.0005
0.01
0.002


3064354
0.62
0.0028
1.3
0.63
0.0004
0.67
0.58
0.62
0.63
5.88
0.0005
0.003
0.002
0.07
0.006


3075645
0.62
0.0049
1.37
0.61
0.0028
0.64
0.57
0.61
0.61
5.92
0.0025
0.0062
0.006
0.16
0.027


3076355
0.67
0
1.49
0.61
0.0018
0.57
0.65
0.63
0.6
5.8
0.0019
0.0001
0
0.02
0.001


3076393
0.63
0.001
1.34
0.62
0.0007
0.54
0.7
0.65
0.6
4.19
0
0.0001
0.0009
0.01
0.038


3076490
0.63
0.0023
1.3
0.63
0.0004
0.61
0.64
0.64
0.62
6.59
0.0006
0.0037
0.0015
0.03
0.002


3081625
0.61
0.0064
1.26
0.59
0.0095
0.53
0.65
0.61
0.58
4.98
0.0063
0.0072
0.006
0.34
0.057


3087828
0.64
0.001
1.26
0.6
0.0064
0.5
0.69
0.63
0.58
5.49
0.0048
0.0012
0.0014
0.07
0.005


3087930
0.63
0.0022
1.36
0.62
0.0011
0.55
0.68
0.64
0.6
5.84
0.0022
0.0047
0.0026
0.09
0.014


3088570
0.6
0.0133
1.27
0.6
0.0064
0.63
0.56
0.6
0.6
5.28
0.0096
0.022
0.0139
0.1
0.013


3092505
0.61
0.0051
1.39
0.62
0.0007
0.65
0.59
0.62
0.62
5.8
0.0008
0.0048
0.0039
0.15
0.035


3094309
0.62
0.0029
1.57
0.58
0.0197
0.58
0.58
0.59
0.58
4.85
0.03
0.0054
0.0035
0.12
0.012


3096162
0.64
0.0005
1.31
0.62
0.0011
0.54
0.69
0.65
0.6
5.09
0.0022
0.0015
0.0008
0.04
0.005


3096409
0.63
0.0012
1.47
0.64
0.0001
0.5
0.79
0.71
0.61
4.9
0
0.0013
0.0016
0.01
0.003


3096979
0.66
0.0001
1.31
0.64
0.0001
0.6
0.68
0.66
0.63
5.57
0.0001
0.0002
0.0001
0.13
0.01


3099780
0.62
0.005
1.31
0.6
0.0042
0.6
0.6
0.61
0.6
5.8
0.0072
0.0074
0.0052
0.08
0.021


3100230
0.65
0.0004
1.35
0.63
0.0004
0.6
0.65
0.64
0.62
5.98
0.0006
0.0009
0.0007
0.05
0.009


3107638
0.61
0.0092
1.26
0.57
0.038
0.44
0.71
0.61
0.55
4.45
0.0104
0.0052
0.0122
0.24
0.085


3108472
0.65
0.0003
1.29
0.63
0.0004
0.59
0.66
0.65
0.61
6.54
0.0004
0.0004
0.0004
0.02
0.003


3108501
0.65
0.0003
1.27
0.61
0.0028
0.5
0.71
0.65
0.58
4.39
0.0047
0.0031
0.0017
0.19
0.031


3108938
0.61
0.0062
1.26
0.59
0.0138
0.55
0.62
0.6
0.58
4.59
0.0103
0.0101
0.0126
0.33
0.117


3111090
0.64
0.0008
1.28
0.64
0.0001
0.57
0.71
0.67
0.62
5.61
0
0.0003
0.0008
0.06
0.016


3111116
0.61
0.0073
1.37
0.61
0.0018
0.57
0.65
0.63
0.6
5.39
0.0008
0.0037
0.0051
0.22
0.042


3112517
0.63
0.0011
1.37
0.61
0.0018
0.58
0.64
0.63
0.6
6.28
0.0018
0.0009
0.0009
0.05
0.004


3114370
0.61
0.0054
1.27
0.58
0.0276
0.45
0.71
0.62
0.56
4.57
0.0231
0.0084
0.0093
0.46
0.124


3114664
0.6
0.0106
1.28
0.58
0.0197
0.53
0.63
0.6
0.57
5.06
0.0149
0.0158
0.0109
0.12
0.036


3124536
0.63
0.0021
1.28
0.63
0.0002
0.64
0.62
0.64
0.63
6.2
0.0004
0.0027
0.0023
0.01
0.002


3126094
0.63
0.002
1.31
0.64
0.0001
0.71
0.56
0.63
0.65
7.39
0.0002
0.0023
0.0012
0.06
0.006


3128680
0.61
0.008
1.35
0.57
0.038
0.54
0.6
0.59
0.56
5.38
0.0588
0.0095
0.0093
0.31
0.101


3129955
0.64
0.0007
1.3
0.62
0.0011
0.58
0.65
0.63
0.6
5.98
0.001
0.0015
0.0013
0.06
0.006


3131973
0.65
0.0003
1.31
0.64
0.0001
0.56
0.71
0.67
0.61
6.31
0.0001
0.0008
0.0006
0.07
0.006


3132336
0.61
0.0066
1.37
0.61
0.0018
0.53
0.69
0.64
0.59
4.42
0.0017
0.0249
0.0137
0.03
0.003


3133528
0.63
0.0014
1.3
0.62
0.0011
0.5
0.74
0.67
0.59
4.39
0.0004
0.001
0.0018
0.03
0.006


3134184
0.62
0.0035
1.27
0.57
0.038
0.39
0.77
0.63
0.55
3.84
0.0303
0.0046
0.0058
0.72
0.365


3136352
0.64
0.0009
1.31
0.62
0.0011
0.56
0.67
0.64
0.6
7.14
0.0007
0.0008
0.0013
0.03
0.006


3137586
0.63
0.0016
1.27
0.61
0.0028
0.62
0.59
0.61
0.6
6.36
0.0059
0.0023
0.0015
0.1
0.011


3138886
0.62
0.0028
1.25
0.58
0.0276
0.52
0.63
0.6
0.56
5.47
0.0263
0.0025
0.0028
0.14
0.023


3138980
0.6
0.0114
1.27
0.61
0.0028
0.6
0.61
0.62
0.6
5.6
0.0026
0.0142
0.0085
0.15
0.023


3139053
0.6
0.0142
1.28
0.62
0.0011
0.54
0.69
0.65
0.6
5.19
0.0009
0.0174
0.0166
0.44
0.07


3139926
0.66
0.0001
1.36
0.64
0.0001
0.56
0.72
0.68
0.62
5.9
0
0.0001
0.0002
0.03
0.014


3141863
0.62
0.0029
1.62
0.6
0.0042
0.54
0.66
0.63
0.59
3.89
0.0051
0.0093
0.0067
0.1
0.014


3145023
0.61
0.007
1.25
0.59
0.0095
0.52
0.66
0.62
0.58
5.1
0.0132
0.0084
0.0063
0.34
0.117


3145956
0.63
0.0021
1.27
0.63
0.0002
0.68
0.58
0.63
0.64
8.34
0.0004
0.0061
0.0046
0.15
0.011


3145966
0.63
0.001
1.26
0.63
0.0004
0.6
0.65
0.64
0.62
5.71
0.0006
0.0014
0.0012
0.13
0.012


3146538
0.61
0.0052
1.25
0.58
0.0197
0.47
0.7
0.62
0.56
4.01
0.0178
0.0178
0.0184
0.13
0.03


3146566
0.62
0.0027
1.35
0.61
0.0028
0.5
0.71
0.65
0.58
5.22
0.0012
0.0022
0.0033
0.05
0.014


3146788
0.62
0.0027
1.29
0.62
0.0007
0.6
0.64
0.64
0.61
7.65
0.0006
0.0018
0.0019
0.2
0.036


3146799
0.64
0.0005
1.25
0.63
0.0002
0.68
0.58
0.63
0.64
8.6
0.0004
0.0006
0.0007
0.09
0.011


3147328
0.62
0.0042
1.34
0.61
0.0028
0.56
0.65
0.63
0.59
5.1
0.0013
0.0018
0.0041
0.05
0.019


3148628
0.62
0.0031
1.38
0.6
0.0042
0.49
0.72
0.64
0.58
4.19
0.0029
0.0055
0.006
0.14
0.024


3149768
0.61
0.0076
1.39
0.62
0.0011
0.6
0.63
0.63
0.61
6.2
0.0016
0.0083
0.0058
0.16
0.018


3149773
0.65
0.0004
1.35
0.62
0.0007
0.58
0.66
0.64
0.61
4.81
0.001
0.0006
0.0005
0.15
0.009


3149864
0.65
0.0004
1.51
0.65
0
0.66
0.63
0.65
0.65
5.25
0
0.0003
0.0003
0.04
0.006


3151480
0.63
0.0014
1.75
0.62
0.0007
0.55
0.69
0.65
0.6
5.21
0.0004
0.0007
0.0006
0.04
0.005


3152560
0.61
0.0077
1.26
0.6
0.0064
0.53
0.66
0.62
0.58
4.5
0.0084
0.0181
0.0075
0.64
0.1


3153532
0.6
0.012
1.32
0.6
0.0042
0.53
0.67
0.63
0.58
4.96
0.0059
0.0179
0.0145
0.15
0.045


3157388
0.61
0.0102
1.43
0.6
0.0042
0.63
0.57
0.6
0.6
6.08
0.0055
0.0093
0.0074
0.18
0.024


3157461
0.61
0.0058
1.46
0.61
0.0028
0.66
0.55
0.6
0.61
5.23
0.0022
0.0053
0.0047
0.04
0.008


3157723
0.62
0.0037
1.34
0.62
0.0007
0.65
0.59
0.62
0.62
5.9
0.0006
0.0025
0.0025
0.1
0.028


3157847
0.63
0.0011
1.4
0.6
0.0042
0.53
0.67
0.63
0.58
5.48
0.0085
0.0016
0.0009
0.19
0.021


3164299
0.63
0.0019
1.3
0.63
0.0004
0.55
0.7
0.66
0.61
4.81
0.0002
0.0028
0.0036
0.18
0.061


3165138
0.64
0.0006
1.41
0.63
0.0004
0.59
0.66
0.65
0.61
4.24
0.0001
0.0013
0.0015
0.03
0.015


3165799
0.65
0.0004
1.44
0.61
0.0028
0.52
0.69
0.64
0.59
5.26
0.0015
0.0005
0.0004
0.03
0.002


3166029
0.63
0.0011
0.79
0.39
0.9996
0.41
0.38
0.4
0.38
4.13
0.0029
0.0021
0.0016
0.01
0.007


3166735
0.63
0.0015
1.47
0.62
0.0011
0.63
0.6
0.62
0.61
5.52
0.0011
0.0037
0.0025
0.07
0.013


3167990
0.64
0.0008
1.5
0.62
0.0011
0.54
0.69
0.65
0.6
6.06
0.0016
0.0009
0.0007
0.1
0.012


3168127
0.61
0.0096
1.25
0.6
0.0064
0.48
0.72
0.64
0.57
3.78
0.0076
0.0273
0.0127
0.65
0.149


3169011
0.71
0
0.79
0.35
1
0.24
0.47
0.32
0.37
3.13
0
0
0
0
0


3174268
0.67
0.0001
1.26
0.59
0.0095
0.47
0.72
0.64
0.57
5.25
0.0034
0.0001
0.0002
0.01
0.003


3174441
0.62
0.0043
1.29
0.59
0.0095
0.5
0.68
0.62
0.57
5.43
0.0199
0.0101
0.0054
0.34
0.023


3175632
0.65
0.0004
1.47
0.62
0.0011
0.64
0.59
0.62
0.62
5.06
0.0011
0.0003
0.0005
0.05
0.01


3175657
0.61
0.0094
1.28
0.58
0.0276
0.52
0.63
0.6
0.56
5.56
0.0345
0.0166
0.0136
0.56
0.149


3178635
0.63
0.001
1.43
0.59
0.0095
0.5
0.68
0.62
0.57
4.19
0.0078
0.0027
0.0032
0.06
0.019


3183178
0.6
0.0107
1.41
0.59
0.0095
0.53
0.65
0.61
0.58
4.45
0.0073
0.0055
0.0089
0.03
0.013


3190449
0.62
0.0043
1.32
0.59
0.0138
0.58
0.59
0.6
0.58
6.01
0.0129
0.0034
0.0056
0.09
0.038


3192674
0.6
0.0111
1.28
0.59
0.0138
0.52
0.65
0.61
0.57
4.88
0.0094
0.0146
0.0198
0.13
0.081


3197644
0.63
0.0013
1.39
0.58
0.0276
0.62
0.53
0.58
0.58
5.72
0.0406
0.0017
0.0014
0.03
0.006


3199457
0.63
0.0017
1.47
0.62
0.0007
0.55
0.69
0.65
0.6
4.76
0.0011
0.0025
0.0016
0.11
0.012


3199485
0.61
0.0069
1.29
0.61
0.0018
0.48
0.76
0.67
0.58
4.41
0.0008
0.0045
0.0045
0.18
0.048


3200638
0.62
0.0039
1.44
0.6
0.0042
0.56
0.64
0.62
0.59
4.43
0.004
0.0037
0.0028
0.76
0.074


3200711
0.61
0.0066
1.25
0.6
0.0064
0.51
0.68
0.63
0.58
5.69
0.0046
0.0081
0.0054
0.35
0.043


3200718
0.65
0.0004
1.28
0.59
0.0138
0.51
0.66
0.61
0.57
6.59
0.017
0.0004
0.0005
0.03
0.001


3200725
0.65
0.0002
1.35
0.62
0.0007
0.55
0.69
0.65
0.6
7.06
0.0007
0.0001
0.0002
0.04
0.004


3203822
0.62
0.0043
1.31
0.6
0.0042
0.61
0.59
0.61
0.6
4.86
0.0039
0.0058
0.0048
0.12
0.02


3205039
0.65
0.0004
1.26
0.63
0.0004
0.58
0.67
0.65
0.61
5.83
0.0004
0.0006
0.0007
0.02
0.004


3205424
0.62
0.0031
1.34
0.62
0.0011
0.52
0.71
0.65
0.59
4.24
0.0007
0.0068
0.0044
0.19
0.041


3212146
0.61
0.0078
1.36
0.62
0.0007
0.57
0.67
0.64
0.61
5.88
0.0007
0.0063
0.005
0.12
0.012


3212163
0.62
0.0032
1.38
0.62
0.0011
0.59
0.64
0.63
0.61
4.68
0.0009
0.0016
0.0024
0.02
0.008


3214671
0.63
0.0011
1.32
0.63
0.0004
0.63
0.62
0.63
0.62
4.48
0.0007
0.0013
0.0018
0.04
0.01


3214699
0.63
0.0015
1.31
0.63
0.0002
0.54
0.72
0.67
0.61
4.42
0.0001
0.003
0.0055
0.02
0.017


3219683
0.62
0.0032
1.33
0.6
0.0042
0.54
0.66
0.63
0.59
4.95
0.0036
0.0051
0.0057
0.25
0.056


3219711
0.67
0
1.55
0.6
0.0042
0.47
0.74
0.65
0.57
3.71
0.0008
0
0.0001
0
0


3219891
0.63
0.0016
1.53
0.61
0.0028
0.58
0.63
0.62
0.6
5.22
0.0021
0.0012
0.0017
0.03
0.007


3220159
0.62
0.0041
1.32
0.61
0.0018
0.64
0.58
0.61
0.61
7.14
0.0025
0.0055
0.0033
0.07
0.006


3222054
0.64
0.0008
1.3
0.62
0.0011
0.49
0.76
0.67
0.59
5.58
0.0004
0.0009
0.001
0.04
0.013


3222984
0.61
0.0078
1.26
0.54
0.2178
0.38
0.7
0.57
0.52
4.6
0.2985
0.0144
0.0113
0.32
0.046


3223876
0.63
0.0021
1.29
0.62
0.0007
0.57
0.67
0.64
0.61
5
0.0003
0.0015
0.0018
0.02
0.003


3225580
0.62
0.0045
1.26
0.58
0.0276
0.47
0.69
0.61
0.56
3.59
0.0542
0.0619
0.0186
0.25
0.029


3226470
0.63
0.0013
1.33
0.61
0.0028
0.51
0.7
0.64
0.58
3.52
0.0009
0.001
0.0024
0.01
0.004


3227646
0.63
0.0016
1.29
0.6
0.0042
0.59
0.61
0.61
0.59
5.96
0.0031
0.0022
0.0017
0.02
0.005


3233387
0.64
0.0005
1.56
0.65
0
0.66
0.64
0.66
0.65
5.55
0
0.0008
0.0003
0.07
0.004


3234175
0.61
0.007
1.33
0.61
0.0018
0.66
0.56
0.61
0.62
6.78
0.0022
0.0055
0.0052
0.1
0.021


3235500
0.63
0.0019
1.27
0.6
0.0042
0.55
0.65
0.62
0.59
4.55
0.0084
0.0074
0.0038
0.09
0.007


3237000
0.61
0.0092
1.34
0.59
0.0095
0.63
0.55
0.59
0.59
6.38
0.0102
0.015
0.01
0.3
0.041


3237001
0.61
0.0052
1.32
0.6
0.0042
0.65
0.55
0.6
0.61
7.77
0.0072
0.0096
0.0077
0.23
0.021


3239927
0.61
0.0054
1.25
0.6
0.0064
0.58
0.61
0.61
0.59
4.62
0.0068
0.0067
0.0058
0.06
0.017


3239982
0.64
0.0007
1.28
0.6
0.0042
0.51
0.69
0.63
0.58
6.06
0.0028
0.0016
0.0012
0.07
0.006


3240135
0.63
0.0018
1.28
0.59
0.0095
0.47
0.72
0.64
0.57
4.18
0.004
0.0057
0.005
0.08
0.022


3240409
0.66
0.0001
1.27
0.64
0.0001
0.57
0.71
0.67
0.62
7.78
0.0001
0.0002
0.0002
0.02
0.001


3240425
0.64
0.0005
1.29
0.61
0.0018
0.68
0.54
0.61
0.62
6.52
0.0018
0.0017
0.0011
0.06
0.006


3241499
0.63
0.0021
1.29
0.59
0.0095
0.5
0.69
0.63
0.57
4.32
0.0037
0.0026
0.0036
0.03
0.008


3241506
0.63
0.0011
1.3
0.62
0.0007
0.55
0.69
0.65
0.6
5.12
0.0003
0.0012
0.0012
0.09
0.029


3243292
0.65
0.0003
1.4
0.63
0.0004
0.57
0.68
0.65
0.61
5.85
0.0003
0.0003
0.0002
0.01
0.001


3250201
0.6
0.0125
1.57
0.59
0.0095
0.57
0.61
0.6
0.58
4.58
0.009
0.0224
0.0123
0.37
0.035


3251409
0.62
0.0042
1.28
0.62
0.0007
0.51
0.73
0.67
0.6
5.7
0.0003
0.001
0.0025
0.04
0.005


3252608
0.62
0.0037
1.29
0.61
0.0018
0.56
0.66
0.63
0.6
4.94
0.0012
0.0025
0.0036
0.12
0.094


3253445
0.65
0.0002
1.32
0.63
0.0002
0.65
0.61
0.63
0.63
7.12
0.0003
0.0003
0.0003
0.11
0.015


3253863
0.62
0.0043
1.28
0.59
0.0138
0.51
0.66
0.61
0.57
5.05
0.0232
0.0042
0.0032
0.14
0.02


3255269
0.61
0.0092
1.27
0.62
0.0007
0.57
0.67
0.64
0.61
6.42
0.0005
0.0081
0.007
0.25
0.021


3257404
0.6
0.0115
1.33
0.54
0.2178
0.38
0.7
0.57
0.52
4.85
0.2778
0.133
0.0798
0.19
0.03


3258021
0.65
0.0002
1.45
0.65
0
0.65
0.65
0.66
0.65
5.48
0
0.0005
0.0003
0.06
0.005


3259678
0.61
0.0092
1.35
0.59
0.0138
0.49
0.69
0.62
0.57
5.5
0.0074
0.0044
0.0071
0.1
0.029


3261550
0.62
0.0026
1.39
0.61
0.0028
0.5
0.71
0.65
0.58
4.53
0.0018
0.0046
0.0044
0.13
0.038


3262470
0.64
0.0006
1.27
0.59
0.0095
0.54
0.64
0.61
0.58
5.26
0.0133
0.0011
0.0012
0.11
0.028


3263804
0.63
0.0012
1.27
0.6
0.0064
0.55
0.64
0.62
0.58
5.78
0.0024
0.0014
0.0018
0.04
0.005


3264697
0.64
0.0007
1.31
0.62
0.0011
0.52
0.71
0.65
0.59
5.76
0.0009
0.0014
0.001
0.07
0.009


3264726
0.62
0.0024
1.59
0.59
0.0138
0.58
0.59
0.6
0.58
5.41
0.0154
0.0029
0.0019
0.15
0.017


3275175
0.63
0.0016
1.29
0.61
0.0028
0.54
0.67
0.63
0.59
5.15
0.0039
0.0025
0.002
0.12
0.013


3276455
0.62
0.0049
1.26
0.56
0.0681
0.43
0.7
0.6
0.54
3.84
0.0363
0.0135
0.0157
0.07
0.079


3277709
0.66
0.0001
1.33
0.66
0
0.58
0.73
0.69
0.63
4.68
0
0.0005
0.0004
0.06
0.009


3279906
0.62
0.0026
1.26
0.57
0.038
0.59
0.55
0.58
0.57
7.48
0.0556
0.0034
0.0028
0.08
0.009


3280961
0.62
0.0042
1.35
0.59
0.0138
0.48
0.7
0.62
0.57
4.37
0.0237
0.0174
0.0068
0.22
0.042


3282022
0.61
0.0058
1.4
0.58
0.0197
0.55
0.61
0.6
0.57
4.5
0.0225
0.0106
0.0065
0.34
0.048


3282170
0.63
0.0015
1.28
0.62
0.0011
0.57
0.66
0.64
0.6
3.58
0.0004
0.0032
0.0047
0.04
0.013


3282215
0.61
0.0067
1.49
0.59
0.0138
0.54
0.63
0.6
0.57
4.73
0.0203
0.0096
0.0069
0.07
0.006


3282220
0.63
0.0013
1.51
0.63
0.0002
0.59
0.67
0.65
0.62
5.09
0.0002
0.0016
0.001
0.03
0.003


3282254
0.62
0.0034
1.3
0.61
0.0028
0.6
0.61
0.62
0.6
5.13
0.0035
0.0036
0.0034
0.05
0.01


3284025
0.64
0.0009
1.33
0.63
0.0004
0.48
0.79
0.7
0.59
5.03
0.0001
0.0013
0.0011
0.05
0.01


3284217
0.64
0.0009
1.27
0.63
0.0002
0.69
0.57
0.63
0.64
6.48
0.0005
0.0008
0.0009
0.01
0.002


3284603
0.61
0.006
1.28
0.58
0.0197
0.53
0.63
0.6
0.57
5.47
0.0264
0.0095
0.007
0.15
0.026


3284665
0.62
0.0039
1.33
0.58
0.0276
0.54
0.61
0.59
0.57
5.97
0.0194
0.0033
0.0044
0.25
0.072


3294341
0.6
0.0107
1.39
0.6
0.0064
0.53
0.66
0.62
0.58
4.2
0.0055
0.0118
0.0091
0.08
0.012


3294501
0.63
0.0017
1.32
0.63
0.0002
0.61
0.65
0.65
0.62
4.97
0.0002
0.0032
0.0027
0.07
0.022


3298980
0.61
0.0095
1.34
0.62
0.0011
0.52
0.71
0.65
0.59
4.05
0.0018
0.03
0.0241
0.35
0.153


3301222
0.6
0.0138
1.33
0.6
0.0042
0.68
0.52
0.59
0.61
6.14
0.0063
0.0187
0.0112
0.29
0.034


3301703
0.6
0.014
1.34
0.61
0.0028
0.49
0.73
0.65
0.58
3.72
0.0038
0.0107
0.0074
0.32
0.041


3301858
0.6
0.0134
1.28
0.58
0.0276
0.39
0.78
0.64
0.55
4.07
0.0142
0.0254
0.0172
0.16
0.033


3301863
0.62
0.0033
1.36
0.63
0.0004
0.63
0.62
0.63
0.62
7.19
0.0008
0.0056
0.0027
0.22
0.012


3302047
0.67
0.0001
1.35
0.62
0.0011
0.53
0.7
0.65
0.59
5.12
0.0006
0.0001
0.0002
0.03
0.003


3304013
0.62
0.0031
1.29
0.61
0.0028
0.64
0.57
0.61
0.61
6.38
0.0046
0.0037
0.0025
0.1
0.005


3304626
0.61
0.0076
1.25
0.6
0.0042
0.5
0.7
0.64
0.58
5.73
0.0021
0.0052
0.0043
0.17
0.031


3304652
0.65
0.0003
1.38
0.6
0.0064
0.49
0.71
0.64
0.57
4.91
0.0031
0.0002
0.0004
0.09
0.011


3307940
0.61
0.0096
1.28
0.58
0.0276
0.5
0.65
0.6
0.56
3.98
0.0357
0.0117
0.009
0.15
0.03


3308532
0.62
0.0038
1.26
0.56
0.0889
0.4
0.72
0.6
0.54
5.32
0.033
0.0273
0.0286
0.23
0.05


3309267
0.6
0.0121
1.32
0.59
0.0138
0.57
0.6
0.6
0.58
5.15
0.006
0.0079
0.0119
0.12
0.043


3311304
0.65
0.0002
1.3
0.61
0.0028
0.45
0.78
0.67
0.58
3.87
0.0022
0.0017
0.0007
0.07
0.003


3317557
0.65
0.0002
1.35
0.57
0.0513
0.43
0.71
0.61
0.55
3.97
0.0488
0.0074
0.0035
0
0.001


3325714
0.61
0.0053
1.29
0.58
0.0197
0.47
0.7
0.62
0.56
4.46
0.0169
0.007
0.0057
0.27
0.036


3325963
0.64
0.0006
1.43
0.63
0.0004
0.65
0.6
0.63
0.63
5.49
0.0006
0.0017
0.0006
0.05
0.004


3326246
0.63
0.0022
1.26
0.59
0.0138
0.42
0.77
0.65
0.56
4.09
0.0088
0.0082
0.0071
0.08
0.035


3326465
0.66
0.0001
1.43
0.61
0.0028
0.54
0.67
0.63
0.59
3.43
0.0021
0.0001
0.0002
0.06
0.004


3329941
0.64
0.0008
1.3
0.62
0.0011
0.57
0.66
0.64
0.6
4.95
0.0005
0.0002
0.0008
0.03
0.013


3331532
0.66
0.0001
1.29
0.64
0.0001
0.6
0.68
0.66
0.63
6.28
0.0001
0.0001
0.0001
0.01
0


3331573
0.62
0.0025
1.43
0.63
0.0002
0.63
0.63
0.64
0.63
5.1
0.0002
0.0008
0.001
0.09
0.016


3331613
0.65
0.0002
1.26
0.63
0.0004
0.55
0.7
0.66
0.61
6.82
0.0004
0.0003
0.0002
0.01
0.001


3331614
0.64
0.0006
1.36
0.63
0.0004
0.72
0.53
0.61
0.65
6.9
0.0006
0.0014
0.0008
0.03
0.002


3333687
0.6
0.0109
1.29
0.59
0.0138
0.58
0.59
0.6
0.58
5.39
0.021
0.0263
0.0172
0.22
0.06


3334162
0.64
0.0007
1.31
0.61
0.0028
0.5
0.72
0.65
0.58
5.02
0.0008
0.0003
0.001
0.05
0.066


3334515
0.62
0.003
1.26
0.6
0.0042
0.67
0.53
0.6
0.61
7.13
0.0057
0.0025
0.0022
0.02
0.002


3335173
0.66
0.0001
1.47
0.62
0.0007
0.67
0.57
0.62
0.63
6.87
0.0011
0.0001
0.0001
0.02
0.002


3335176
0.65
0.0003
1.38
0.61
0.0028
0.6
0.61
0.62
0.6
6.73
0.0032
0.0003
0.0003
0.02
0.002


3335178
0.65
0.0003
1.31
0.62
0.0007
0.62
0.62
0.63
0.62
7
0.0004
0.0002
0.0003
0.01
0.002


3335179
0.65
0.0002
1.46
0.63
0.0002
0.6
0.66
0.65
0.62
5.84
0.0002
0.0002
0.0002
0.01
0.002


3335181
0.65
0.0002
1.29
0.61
0.0018
0.69
0.53
0.6
0.63
8.16
0.0027
0.0008
0.0008
0.03
0.003


3335182
0.64
0.0004
1.29
0.62
0.0007
0.67
0.57
0.62
0.63
8.91
0.001
0.0008
0.0009
0.03
0.003


3335187
0.65
0.0002
1.38
0.64
0.0001
0.69
0.59
0.64
0.65
8.55
0.0001
0.0004
0.0005
0.03
0.002


3335188
0.65
0.0003
1.27
0.63
0.0002
0.7
0.56
0.62
0.65
9.15
0.0004
0.0007
0.0005
0.03
0.003


3335189
0.62
0.0037
1.29
0.59
0.0138
0.59
0.58
0.59
0.58
5.87
0.0145
0.0018
0.0036
0.05
0.023


3335191
0.65
0.0004
1.32
0.62
0.0011
0.65
0.58
0.62
0.62
8.92
0.0014
0.0007
0.0012
0.04
0.005


3335231
0.64
0.0006
1.27
0.63
0.0004
0.75
0.5
0.61
0.66
7.56
0.0005
0.0008
0.0006
0.03
0.004


3337724
0.64
0.0006
1.26
0.64
0.0001
0.64
0.64
0.65
0.64
7.12
0.0001
0.0012
0.0005
0.09
0.003


3338618
0.65
0.0002
1.36
0.65
0
0.62
0.67
0.66
0.63
7.42
0
0.0003
0.0003
0.02
0.003


3341466
0.63
0.0017
1.25
0.63
0.0002
0.68
0.58
0.63
0.64
5.33
0.0002
0.0021
0.0027
0.09
0.033


3341504
0.64
0.0009
1.5
0.6
0.0042
0.58
0.62
0.61
0.59
5.8
0.0053
0.0011
0.0009
0.05
0.005


3344853
0.62
0.005
1.6
0.6
0.0042
0.63
0.57
0.6
0.6
4.8
0.0033
0.0048
0.0032
0.07
0.009


3344889
0.62
0.0049
1.34
0.59
0.0138
0.49
0.69
0.62
0.57
3.99
0.0097
0.0046
0.0044
0.11
0.017


3345453
0.61
0.0074
1.57
0.6
0.0064
0.55
0.64
0.62
0.58
5.32
0.0054
0.0092
0.0078
0.11
0.047


3347691
0.61
0.0072
1.26
0.59
0.0138
0.55
0.62
0.6
0.58
6.2
0.0155
0.0116
0.0059
0.14
0.02


3352533
0.67
0
1.25
0.63
0.0002
0.69
0.57
0.63
0.64
5.45
0.0005
0.0001
0.0001
0.02
0.001


3352561
0.62
0.0051
1.32
0.62
0.0007
0.6
0.64
0.64
0.61
4.61
0.0012
0.0063
0.005
0.15
0.027


3352585
0.61
0.0063
1.34
0.62
0.0011
0.7
0.53
0.61
0.63
5.69
0.0011
0.0066
0.0071
0.08
0.019


3352925
0.62
0.0027
1.32
0.62
0.0011
0.57
0.66
0.64
0.6
3.22
0.0009
0.0009
0.0012
0.04
0.004


3354966
0.62
0.003
1.29
0.62
0.0011
0.61
0.62
0.63
0.61
7.42
0.0013
0.0043
0.0041
0.1
0.013


3356173
0.62
0.0045
1.3
0.6
0.0042
0.56
0.64
0.62
0.59
4.84
0.0026
0.0039
0.0045
0.02
0.011


3358364
0.64
0.0004
1.4
0.63
0.0004
0.71
0.54
0.62
0.65
5.9
0.0004
0.0005
0.0003
0.02
0.002


3359382
0.64
0.0006
1.35
0.6
0.0042
0.49
0.72
0.64
0.58
4.53
0.0026
0.0004
0.0008
0.12
0.013


3362739
0.62
0.0023
1.42
0.6
0.0064
0.52
0.67
0.62
0.58
4.72
0.0043
0.0022
0.0026
0.01
0.01


3362742
0.65
0.0002
1.56
0.64
0.0001
0.66
0.62
0.64
0.64
5.09
0.0001
0.0003
0.0004
0.02
0.009


3362745
0.61
0.007
1.39
0.6
0.0042
0.56
0.64
0.62
0.59
5.36
0.0023
0.0051
0.0054
0.08
0.024


3362763
0.67
0
1.25
0.62
0.0007
0.54
0.7
0.65
0.6
5.41
0.0006
0.0002
0.0001
0.01
0.001


3362773
0.64
0.001
1.28
0.61
0.0018
0.55
0.67
0.64
0.59
7.19
0.0012
0.0013
0.0008
0.06
0.003


3362943
0.62
0.0049
1.47
0.61
0.0018
0.58
0.64
0.63
0.6
5.08
0.0014
0.0056
0.004
0.1
0.01


3363519
0.61
0.0099
1.31
0.63
0.0004
0.6
0.65
0.64
0.62
4.57
0
0.0093
0.017
0.03
0.065


3363981
0.6
0.0113
1.29
0.58
0.0276
0.47
0.69
0.61
0.56
3.66
0.0122
0.0376
0.043
0.14
0.055


3364729
0.61
0.0056
1.36
0.56
0.0681
0.49
0.64
0.58
0.55
4.73
0.0521
0.0049
0.0071
0.14
0.118


3364770
0.64
0.0006
1.28
0.6
0.0064
0.52
0.67
0.62
0.58
4.25
0.0074
0.0011
0.0008
0.06
0.012


3364800
0.64
0.0006
1.32
0.64
0.0001
0.58
0.69
0.66
0.62
3.64
0.0001
0.002
0.001
0.08
0.017


3368920
0.6
0.011
1.34
0.6
0.0064
0.55
0.64
0.62
0.58
5.71
0.0113
0.0142
0.0091
0.13
0.018


3371737
0.61
0.0063
1.25
0.61
0.0028
0.57
0.64
0.62
0.59
6.25
0.0034
0.0073
0.0052
0.13
0.018


3372461
0.61
0.0093
1.39
0.57
0.0513
0.47
0.67
0.59
0.55
3.62
0.0298
0.0243
0.0231
0.05
0.019


3375309
0.6
0.0134
1.54
0.6
0.0064
0.62
0.57
0.6
0.6
4.78
0.0149
0.0179
0.0088
0.18
0.018


3375752
0.66
0.0001
1.3
0.61
0.0018
0.6
0.62
0.62
0.6
5.1
0.0026
0.0006
0.0004
0.02
0.003


3375863
0.63
0.0016
1.3
0.61
0.0018
0.58
0.64
0.63
0.6
4.63
0.0048
0.0035
0.0017
0.04
0.005


3376090
0.64
0.0005
1.42
0.62
0.0007
0.64
0.6
0.63
0.62
5.66
0.0009
0.0004
0.0004
0.07
0.009


3376775
0.62
0.0036
1.25
0.59
0.0095
0.62
0.56
0.59
0.59
5.6
0.0068
0.0043
0.0049
0.09
0.021


3377457
0.61
0.0057
1.58
0.62
0.0007
0.62
0.62
0.63
0.62
4.79
0.0002
0.0042
0.0044
0.04
0.008


3377464
0.62
0.004
1.36
0.63
0.0004
0.65
0.6
0.63
0.63
6.05
0.0004
0.0034
0.0024
0.09
0.013


3377621
0.64
0.0005
1.42
0.62
0.0011
0.68
0.55
0.61
0.63
6.62
0.0015
0.0003
0.0004
0.03
0.007


3377623
0.63
0.0016
1.37
0.6
0.0064
0.64
0.55
0.6
0.6
6.65
0.0059
0.0009
0.0011
0.04
0.008


3377625
0.63
0.0017
1.31
0.61
0.0028
0.73
0.48
0.59
0.64
6.78
0.0033
0.0021
0.0019
0.1
0.01


3377632
0.64
0.001
1.37
0.59
0.0095
0.66
0.52
0.59
0.6
6.13
0.0099
0.0008
0.0009
0.03
0.004


3377633
0.61
0.0054
1.26
0.59
0.0095
0.53
0.65
0.61
0.58
6.83
0.0047
0.0024
0.005
0.08
0.038


3377659
0.65
0.0004
1.29
0.61
0.0018
0.65
0.57
0.61
0.62
9.15
0.0022
0.0009
0.0011
0.04
0.003


3377660
0.64
0.0006
1.29
0.63
0.0004
0.66
0.59
0.63
0.63
7.82
0.0004
0.0011
0.0013
0.04
0.004


3379122
0.62
0.0028
1.44
0.61
0.0018
0.67
0.55
0.61
0.62
6.31
0.0018
0.0035
0.0029
0.07
0.007


3379574
0.61
0.0069
1.36
0.6
0.0042
0.55
0.65
0.62
0.59
4.73
0.0024
0.0056
0.0057
0.13
0.019


3382981
0.66
0.0001
1.29
0.62
0.0011
0.6
0.63
0.63
0.61
5.13
0.0008
0.0002
0.0002
0.01
0.003


3382984
0.64
0.0004
1.32
0.6
0.0042
0.57
0.63
0.62
0.59
5.6
0.0036
0.0006
0.0007
0.05
0.011


3383148
0.63
0.0011
1.39
0.62
0.0007
0.69
0.55
0.61
0.64
6.75
0.0009
0.0017
0.0012
0.02
0.002


3383149
0.61
0.0056
1.47
0.58
0.0197
0.59
0.57
0.59
0.58
5.88
0.0217
0.0051
0.0047
0.09
0.013


3384489
0.64
0.0008
1.41
0.61
0.0018
0.57
0.65
0.63
0.6
5.19
0.0022
0.0009
0.0009
0.02
0.002


3384495
0.62
0.0035
1.35
0.63
0.0004
0.64
0.61
0.63
0.63
4.38
0.0011
0.0121
0.0058
0.41
0.051


3385045
0.65
0.0002
1.27
0.6
0.0042
0.43
0.79
0.67
0.57
3.72
0.0004
0.0002
0.0008
0.01
0.004


3385178
0.6
0.0107
1.34
0.6
0.0064
0.53
0.66
0.62
0.58
4.08
0.0055
0.0123
0.011
0.23
0.067


3386816
0.64
0.0009
1.33
0.61
0.0018
0.56
0.66
0.63
0.6
7.1
0.0036
0.0021
0.0009
0.06
0.003


3387176
0.61
0.009
1.26
0.59
0.0095
0.48
0.71
0.63
0.57
4.06
0.0173
0.0177
0.0116
0.48
0.068


3387436
0.64
0.0004
1.29
0.61
0.0028
0.54
0.67
0.63
0.59
5.92
0.0032
0.0011
0.0004
0.02
0.002


3388633
0.64
0.0005
1.31
0.65
0
0.58
0.72
0.69
0.63
5.36
0
0.0006
0.0005
0.03
0.006


3393789
0.62
0.0033
1.38
0.63
0.0004
0.61
0.64
0.64
0.62
5.27
0.0008
0.0028
0.0022
0.08
0.006


3394076
0.65
0.0002
1.28
0.64
0.0001
0.59
0.69
0.67
0.62
7.04
0.0001
0.0002
0.0003
0.04
0.003


3394529
0.6
0.0109
1.35
0.59
0.0138
0.53
0.64
0.61
0.57
4.77
0.0115
0.0238
0.0278
0.58
0.288


3395420
0.61
0.0057
1.37
0.61
0.0018
0.64
0.58
0.61
0.61
6.13
0.0033
0.0052
0.0057
0.11
0.016


3395427
0.62
0.0026
1.29
0.62
0.0007
0.59
0.65
0.64
0.61
5.82
0.0004
0.0026
0.0032
0.05
0.015


3400152
0.62
0.0024
1.26
0.6
0.0042
0.58
0.62
0.61
0.59
4.91
0.0069
0.0035
0.0021
0.16
0.022


3402624
0.61
0.0103
1.25
0.58
0.0276
0.51
0.64
0.6
0.56
5.13
0.0325
0.0107
0.0113
0.04
0.018


3402667
0.63
0.0021
1.25
0.59
0.0095
0.6
0.58
0.6
0.59
5.61
0.0058
0.0017
0.002
0.01
0.003


3402720
0.63
0.0012
1.4
0.61
0.0018
0.58
0.64
0.63
0.6
5.64
0.0021
0.0023
0.0015
0.04
0.004


3406062
0.63
0.0018
1.29
0.64
0.0001
0.57
0.7
0.67
0.62
4.22
0.0002
0.0021
0.002
0.06
0.005


3407177
0.64
0.0005
1.25
0.54
0.2178
0.34
0.74
0.58
0.52
3.85
0.1199
0.0007
0.0022
0.08
0.029


3407275
0.61
0.0068
1.28
0.56
0.0681
0.46
0.67
0.59
0.55
5.5
0.0872
0.0085
0.0089
0.38
0.1


3409292
0.61
0.0081
1.31
0.63
0.0002
0.59
0.67
0.65
0.62
5.99
0.0002
0.0054
0.0088
0.25
0.06


3412651
0.63
0.0015
1.31
0.6
0.0042
0.48
0.73
0.65
0.58
5.63
0.0043
0.0023
0.0018
0.03
0.005


3414226
0.64
0.0007
1.4
0.65
0
0.67
0.62
0.65
0.65
6.01
0
0.0006
0.0004
0.01
0.001


3416068
0.65
0.0003
1.34
0.62
0.0011
0.63
0.6
0.62
0.61
5.69
0.001
0.0002
0.0004
0.01
0.005


3416501
0.6
0.0141
1.26
0.6
0.0064
0.49
0.71
0.64
0.57
4.91
0.0061
0.025
0.02
0.24
0.076


3417160
0.64
0.0004
1.38
0.62
0.0011
0.61
0.62
0.63
0.61
6.47
0.0013
0.0004
0.0005
0.01
0.002


3417666
0.64
0.0005
1.31
0.58
0.0276
0.55
0.6
0.59
0.57
6.07
0.0331
0.0008
0.0006
0.02
0.003


3418209
0.62
0.0041
1.34
0.6
0.0064
0.55
0.64
0.62
0.58
4.18
0.006
0.0085
0.0083
0.06
0.018


3419262
0.63
0.0021
1.29
0.62
0.0007
0.54
0.7
0.65
0.6
5.76
0.0005
0.0031
0.0026
0.06
0.011


3419622
0.64
0.0009
1.35
0.62
0.0011
0.6
0.63
0.63
0.61
4.99
0.0005
0.0004
0.0007
0.04
0.024


3421154
0.62
0.0037
1.42
0.59
0.0095
0.65
0.53
0.59
0.6
5.74
0.0115
0.0039
0.0032
0.07
0.007


3421223
0.61
0.0062
1.58
0.61
0.0018
0.56
0.66
0.63
0.6
4.69
0.0017
0.0054
0.0035
0.09
0.015


3421350
0.63
0.0014
1.39
0.6
0.0064
0.57
0.62
0.61
0.59
5.56
0.0042
0.001
0.0009
0.04
0.009


3421492
0.61
0.006
1.25
0.6
0.0064
0.48
0.72
0.64
0.57
4.45
0.0054
0.0103
0.005
0.13
0.024


3421652
0.61
0.0085
1.31
0.61
0.0028
0.62
0.59
0.61
0.6
6.32
0.0035
0.0138
0.0078
0.2
0.016


3421668
0.64
0.001
1.3
0.58
0.0276
0.42
0.74
0.63
0.55
4.63
0.0331
0.0093
0.0031
0.04
0.017


3427811
0.61
0.0086
1.3
0.61
0.0018
0.54
0.68
0.64
0.59
3.76
0.0018
0.0186
0.0167
0.04
0.01


3427812
0.65
0.0002
1.51
0.6
0.0042
0.6
0.6
0.61
0.6
5.2
0.0055
0.0004
0.0003
0
0


3428711
0.66
0.0002
1.34
0.62
0.0011
0.46
0.79
0.69
0.58
4.49
0.0002
0.0011
0.0009
0.01
0.004


3428712
0.62
0.0025
1.31
0.58
0.0276
0.45
0.71
0.62
0.56
4.48
0.0242
0.0169
0.0072
0.18
0.028


3429794
0.62
0.003
1.26
0.62
0.0007
0.59
0.65
0.64
0.61
5.44
0.0006
0.0053
0.006
0.1
0.023


3430575
0.62
0.0025
1.26
0.61
0.0018
0.54
0.68
0.64
0.59
6.53
0.0021
0.0033
0.0034
0.07
0.02


3431352
0.6
0.0111
1.31
0.6
0.0042
0.58
0.62
0.61
0.59
5.54
0.0047
0.0188
0.0099
0.13
0.011


3431686
0.64
0.0007
1.27
0.64
0.0001
0.55
0.72
0.67
0.61
5.54
0.0002
0.0014
0.0008
0.05
0.004


3432171
0.64
0.0006
1.42
0.64
0.0001
0.63
0.64
0.65
0.63
5.86
0.0002
0.0005
0.0003
0.04
0.002


3432352
0.62
0.0049
1.26
0.58
0.0197
0.52
0.64
0.6
0.57
5.27
0.0135
0.0039
0.0068
0.06
0.018


3435860
0.64
0.0008
1.4
0.64
0.0001
0.67
0.6
0.64
0.64
4.87
0.0001
0.0008
0.001
0.03
0.006


3435864
0.64
0.0006
1.28
0.59
0.0138
0.5
0.67
0.61
0.57
6.2
0.0067
0.0005
0.0009
0.01
0.009


3436017
0.62
0.0025
1.25
0.59
0.0138
0.56
0.61
0.6
0.58
5.68
0.0145
0.004
0.0035
0.02
0.008


3436264
0.62
0.0031
1.48
0.6
0.0064
0.56
0.63
0.61
0.58
4.23
0.0064
0.0047
0.0035
0.03
0.003


3438044
0.61
0.0098
1.38
0.59
0.0095
0.48
0.71
0.63
0.57
4.94
0.0063
0.0105
0.0116
0.2
0.105


3445545
0.61
0.0065
1.27
0.59
0.0095
0.54
0.64
0.61
0.58
5.51
0.0066
0.0105
0.0078
0.12
0.02


3445674
0.64
0.0008
1.36
0.6
0.0064
0.47
0.73
0.64
0.57
3.86
0.0016
0.0034
0.0036
0.01
0.007


3445750
0.64
0.0009
1.3
0.6
0.0064
0.43
0.78
0.66
0.57
4.94
0.003
0.001
0.0008
0.47
0.142


3446488
0.61
0.0055
1.34
0.58
0.0197
0.58
0.58
0.59
0.58
5.85
0.0292
0.0049
0.0051
0.34
0.056


3446869
0.61
0.0097
1.25
0.6
0.0064
0.61
0.58
0.6
0.59
7.86
0.0106
0.0086
0.007
0.05
0.006


3446885
0.61
0.006
1.26
0.57
0.0513
0.48
0.66
0.59
0.55
4.75
0.0338
0.0069
0.0077
0.02
0.02


3452256
0.63
0.0022
1.34
0.62
0.0007
0.65
0.59
0.62
0.62
5.46
0.0014
0.0028
0.0021
0.05
0.017


3452262
0.63
0.0011
1.41
0.61
0.0028
0.56
0.65
0.63
0.59
4.74
0.0035
0.0018
0.0018
0.08
0.034


3452324
0.62
0.0036
1.31
0.61
0.0018
0.56
0.66
0.63
0.6
5.71
0.001
0.0029
0.0046
0.15
0.046


3452349
0.67
0
1.25
0.62
0.0007
0.51
0.73
0.67
0.6
6.28
0.0004
0.0001
0.0001
0.12
0.011


3454729
0.62
0.0024
1.26
0.61
0.0018
0.58
0.64
0.63
0.6
7.12
0.0011
0.0022
0.0025
0.08
0.01


3456599
0.63
0.0015
1.4
0.62
0.0011
0.59
0.64
0.63
0.61
4.31
0.0007
0.0019
0.0024
0.04
0.015


3457550
0.64
0.0008
1.27
0.64
0.0001
0.57
0.7
0.67
0.62
6.92
0.0002
0.0008
0.0006
0.05
0.008


3458494
0.63
0.0011
1.28
0.62
0.0011
0.56
0.67
0.64
0.6
5.36
0.0004
0.0003
0.0007
0
0.002


3461302
0.63
0.0021
1.4
0.6
0.0042
0.59
0.61
0.61
0.59
6.08
0.0057
0.0033
0.0023
0.05
0.003


3461431
0.68
0
1.28
0.66
0
0.6
0.71
0.69
0.64
4.02
0
0
0
0
0.001


3462710
0.61
0.0055
1.28
0.59
0.0095
0.54
0.64
0.61
0.58
6.36
0.0099
0.01
0.0079
0.1
0.025


3462846
0.62
0.0037
1.34
0.57
0.0513
0.52
0.61
0.58
0.56
4.1
0.0946
0.0243
0.0079
0.21
0.016


3462861
0.6
0.0107
1.26
0.56
0.0681
0.51
0.61
0.58
0.55
5.04
0.0861
0.017
0.0147
0.14
0.022


3462867
0.65
0.0003
1.31
0.62
0.0007
0.68
0.56
0.62
0.63
7.41
0.0009
0.0006
0.0005
0.02
0.001


3462868
0.63
0.0011
1.26
0.58
0.0197
0.46
0.71
0.62
0.56
4.64
0.0393
0.007
0.0029
0.21
0.024


3462884
0.65
0.0002
1.3
0.62
0.0007
0.5
0.74
0.67
0.59
5.57
0.0004
0.0008
0.0004
0.05
0.002


3462988
0.64
0.0005
1.34
0.62
0.0007
0.69
0.55
0.61
0.64
5.34
0.0008
0.0007
0.0005
0.01
0.003


3463596
0.68
0
1.29
0.64
0.0001
0.52
0.76
0.69
0.61
6.46
0.0001
0
0
0.01
0


3463603
0.67
0
1.27
0.63
0.0002
0.56
0.7
0.66
0.61
4.05
0.0001
0.0003
0.0006
0.01
0.002


3464009
0.61
0.0058
1.27
0.63
0.0004
0.66
0.59
0.63
0.63
4.22
0.001
0.0295
0.0147
0.47
0.096


3465251
0.63
0.0021
1.36
0.6
0.0042
0.5
0.7
0.64
0.58
5.2
0.0027
0.0046
0.0045
0.12
0.023


3465252
0.61
0.007
1.47
0.62
0.0011
0.61
0.62
0.63
0.61
6.33
0.0022
0.0053
0.0044
0.15
0.018


3465278
0.63
0.002
1.29
0.53
0.31
0.31
0.76
0.56
0.51
5.11
0.3312
0.0161
0.0179
0.3
0.166


3466861
0.62
0.0027
1.27
0.6
0.0042
0.46
0.76
0.66
0.57
4.55
0.0009
0.0015
0.0034
0.13
0.04


3467642
0.63
0.002
1.36
0.61
0.0028
0.59
0.62
0.62
0.6
5.79
0.0024
0.0056
0.0029
0.1
0.015


3468015
0.63
0.0018
1.39
0.62
0.0011
0.52
0.71
0.65
0.59
4.88
0.0003
0.0019
0.0029
0.04
0.009


3469369
0.65
0.0004
1.27
0.6
0.0042
0.48
0.73
0.65
0.58
3.12
0.0033
0.0013
0.0016
0.01
0.012


3471177
0.6
0.0141
1.26
0.59
0.0138
0.5
0.67
0.61
0.57
4.52
0.008
0.0075
0.0107
0.23
0.184


3471377
0.64
0.0008
1.45
0.64
0.0001
0.6
0.68
0.66
0.63
6.02
0.0001
0.0003
0.0004
0.05
0.003


3471379
0.62
0.0035
1.27
0.58
0.0197
0.49
0.68
0.61
0.56
4.35
0.0131
0.0067
0.0081
0.51
0.146


3472092
0.62
0.0043
1.29
0.61
0.0018
0.65
0.57
0.61
0.62
7.95
0.0025
0.0042
0.0034
0.12
0.009


3473482
0.62
0.0043
1.3
0.57
0.038
0.46
0.69
0.61
0.55
4.38
0.0518
0.0078
0.0068
0.11
0.02


3474494
0.65
0.0004
1.33
0.62
0.0007
0.65
0.59
0.62
0.62
6.29
0.0019
0.0008
0.0005
0.04
0.004


3474937
0.61
0.0079
1.26
0.58
0.0276
0.52
0.63
0.6
0.56
5.34
0.0197
0.0188
0.0152
0.06
0.009


3475623
0.61
0.0058
1.26
0.57
0.038
0.46
0.69
0.61
0.55
4.6
0.0285
0.0095
0.0102
0.1
0.017


3475737
0.62
0.004
1.25
0.64
0.0001
0.55
0.72
0.67
0.61
4.86
0.0001
0.0043
0.0066
0.07
0.046


3476294
0.62
0.0029
1.38
0.61
0.0028
0.61
0.6
0.61
0.6
5.71
0.0039
0.0046
0.0034
0.06
0.004


3480098
0.66
0.0002
1.45
0.6
0.0064
0.55
0.64
0.62
0.58
4.26
0.0031
0.0001
0.0002
0.06
0.007


3480100
0.63
0.0016
1.25
0.58
0.0276
0.48
0.68
0.61
0.56
3.35
0.016
0.0014
0.002
0.02
0.01


3480173
0.63
0.0014
1.25
0.6
0.0042
0.51
0.69
0.63
0.58
5.38
0.002
0.0014
0.0018
0.07
0.01


3480201
0.65
0.0003
1.37
0.62
0.0007
0.62
0.62
0.63
0.62
5.14
0.0006
0.0003
0.0004
0.09
0.009


3480203
0.62
0.003
1.27
0.59
0.0138
0.59
0.58
0.59
0.58
5.88
0.0211
0.007
0.004
0.18
0.008


3480685
0.63
0.002
1.3
0.63
0.0002
0.66
0.6
0.63
0.63
7
0.0002
0.0025
0.0022
0.03
0.005


3480856
0.67
0.0001
1.29
0.61
0.0018
0.58
0.64
0.63
0.6
6.68
0.0039
0.0002
0.0001
0.02
0.003


3481480
0.64
0.0008
1.35
0.61
0.0018
0.59
0.63
0.63
0.6
4.71
0.0028
0.0042
0.0017
0.05
0.001


3482124
0.61
0.0063
1.28
0.59
0.0138
0.51
0.66
0.61
0.57
5.98
0.0166
0.0035
0.0051
0.36
0.126


3482915
0.62
0.0047
1.43
0.62
0.0007
0.53
0.71
0.66
0.6
4.94
0.0002
0.007
0.0076
0.03
0.004


3482916
0.61
0.0061
1.56
0.63
0.0004
0.63
0.62
0.63
0.62
4.71
0.0004
0.0041
0.0031
0.1
0.014


3483215
0.64
0.0006
1.27
0.62
0.0007
0.62
0.62
0.63
0.62
7.97
0.0005
0.0006
0.0008
0.03
0.003


3484743
0.65
0.0004
1.32
0.66
0
0.63
0.68
0.67
0.64
6.65
0
0.0004
0.0003
0.02
0.001


3484750
0.65
0.0002
1.48
0.64
0.0001
0.6
0.68
0.66
0.63
5.16
0.0001
0.0004
0.0003
0.01
0.002


3484756
0.64
0.0009
1.27
0.62
0.0011
0.55
0.68
0.64
0.6
5.07
0.0005
0.0007
0.0008
0.1
0.018


3484762
0.66
0.0001
1.33
0.64
0.0001
0.58
0.7
0.67
0.62
6.04
0
0.0001
0.0001
0.01
0.001


3485891
0.61
0.0092
1.54
0.59
0.0095
0.56
0.62
0.61
0.58
4.59
0.0142
0.0118
0.0077
0.16
0.012


3489010
0.62
0.0034
1.38
0.58
0.0276
0.56
0.59
0.59
0.57
5.21
0.0421
0.0074
0.0052
0.07
0.019


3489011
0.62
0.0026
1.33
0.61
0.0018
0.7
0.52
0.6
0.63
7.21
0.0034
0.0043
0.0025
0.11
0.007


3494193
0.61
0.0096
1.39
0.61
0.0018
0.62
0.6
0.62
0.61
5.2
0.001
0.0067
0.01
0.06
0.028


3497656
0.6
0.0148
1.36
0.6
0.0064
0.53
0.66
0.62
0.58
3.74
0.0131
0.0094
0.0103
0.12
0.051


3497658
0.64
0.0009
1.27
0.64
0.0001
0.59
0.68
0.66
0.62
6.46
0.0001
0.001
0.001
0.02
0.001


3497823
0.65
0.0003
1.31
0.61
0.0018
0.55
0.67
0.64
0.59
4.76
0.0017
0.0009
0.0007
0.02
0.003


3498048
0.63
0.0014
1.36
0.59
0.0138
0.45
0.73
0.63
0.56
4.52
0.0084
0.0006
0.0008
0.04
0.002


3498445
0.64
0.0007
1.31
0.63
0.0004
0.62
0.63
0.64
0.62
5.36
0.0006
0.0006
0.0008
0.05
0.007


3498523
0.66
0.0001
1.67
0.65
0
0.65
0.64
0.65
0.64
5.42
0.0001
0.0004
0.0002
0.02
0.002


3498537
0.62
0.0033
1.26
0.59
0.0138
0.51
0.66
0.61
0.57
5.14
0.0083
0.0041
0.0041
0.13
0.025


3498977
0.64
0.0008
1.34
0.59
0.0095
0.61
0.57
0.6
0.59
5.28
0.013
0.001
0.0006
0.02
0.001


3499545
0.62
0.0024
1.29
0.63
0.0002
0.62
0.64
0.64
0.62
5.41
0.0003
0.0029
0.0029
0.06
0.006


3500408
0.61
0.0076
1.3
0.59
0.0095
0.53
0.65
0.61
0.58
5.14
0.0086
0.0039
0.006
0.1
0.013


3501216
0.64
0.0009
1.29
0.59
0.0095
0.55
0.63
0.61
0.58
6.18
0.0181
0.001
0.0017
0.04
0.006


3501217
0.65
0.0002
1.34
0.61
0.0028
0.63
0.58
0.61
0.61
6.24
0.0049
0.0002
0.0003
0.01
0.002


3501555
0.68
0
1.51
0.63
0.0002
0.57
0.69
0.66
0.61
5.52
0.0002
0.0001
0
0.01
0


3503211
0.65
0.0002
1.27
0.62
0.0007
0.56
0.68
0.65
0.6
6.53
0.0006
0.0003
0.0003
0.02
0.003


3505453
0.61
0.0073
1.56
0.6
0.0042
0.55
0.65
0.62
0.59
4.72
0.0119
0.01
0.0045
0.12
0.008


3506941
0.62
0.0043
1.38
0.61
0.0028
0.56
0.65
0.63
0.59
4.83
0.0038
0.0043
0.0049
0.13
0.027


3508731
0.65
0.0002
1.35
0.58
0.0197
0.33
0.85
0.69
0.55
4.44
0.0019
0.0006
0.0009
0.03
0.006


3508732
0.61
0.0077
1.28
0.62
0.0011
0.54
0.69
0.65
0.6
5.69
0.0006
0.0062
0.0072
0.15
0.043


3508761
0.65
0.0002
1.31
0.63
0.0004
0.61
0.64
0.64
0.62
6.68
0.0003
0.0002
0.0004
0.02
0.006


3509912
0.64
0.0008
1.48
0.61
0.0018
0.61
0.61
0.62
0.61
3.92
0.0015
0.0034
0.0022
0.04
0.004


3509913
0.61
0.0085
1.32
0.6
0.0064
0.5
0.69
0.63
0.58
4.02
0.0082
0.0161
0.0134
0.16
0.035


3510070
0.61
0.0082
1.25
0.61
0.0018
0.5
0.72
0.65
0.59
7.05
0.0005
0.0024
0.0073
0.07
0.017


3510382
0.64
0.0005
1.37
0.61
0.0028
0.56
0.65
0.63
0.59
5.76
0.0032
0.0005
0.0007
0.01
0.002


3512558
0.64
0.001
1.28
0.59
0.0095
0.65
0.53
0.59
0.6
7.23
0.0117
0.001
0.001
0.07
0.005


3513710
0.62
0.0028
1.29
0.59
0.0138
0.5
0.68
0.62
0.57
4.27
0.0154
0.0068
0.0034
0.09
0.013


3517677
0.65
0.0002
1.45
0.61
0.0018
0.37
0.87
0.74
0.57
4.15
0.0001
0.0001
0.0002
0.03
0.003


3517683
0.67
0
1.25
0.64
0.0001
0.53
0.76
0.69
0.61
5.6
0
0.0001
0.0003
0.01
0.003


3518501
0.62
0.0038
1.35
0.59
0.0138
0.49
0.69
0.62
0.57
4.62
0.0038
0.013
0.0114
0.03
0.01


3519136
0.63
0.001
1.35
0.63
0.0004
0.53
0.72
0.67
0.6
4.81
0.0003
0.0022
0.0017
0.13
0.012


3521962
0.61
0.0059
1.27
0.61
0.0028
0.49
0.73
0.65
0.58
5.22
0.0007
0.003
0.0042
0.29
0.079


3524627
0.62
0.0044
1.26
0.6
0.0042
0.54
0.66
0.63
0.59
5.82
0.0032
0.0044
0.0055
0.07
0.013


3524630
0.6
0.0141
1.31
0.6
0.0064
0.53
0.66
0.62
0.58
4.61
0.0078
0.02
0.0214
0.45
0.127


3524631
0.64
0.0007
1.39
0.61
0.0018
0.58
0.64
0.63
0.6
4.94
0.0015
0.0007
0.0005
0.08
0.005


3525314
0.65
0.0003
1.37
0.62
0.0007
0.61
0.63
0.63
0.61
6.22
0.0007
0.0004
0.0004
0.02
0.001


3525317
0.65
0.0002
1.47
0.59
0.0095
0.55
0.63
0.61
0.58
5.43
0.0188
0.0002
0.0002
0.01
0


3525320
0.63
0.0016
1.38
0.6
0.0042
0.56
0.64
0.62
0.59
5.97
0.0074
0.0009
0.0012
0.1
0.019


3525547
0.61
0.0079
1.26
0.6
0.0042
0.67
0.53
0.6
0.61
5.66
0.0108
0.0083
0.0065
0.07
0.007


3525702
0.62
0.0024
1.37
0.62
0.0011
0.54
0.69
0.65
0.6
5.08
0.001
0.0037
0.002
0.11
0.011


3525704
0.65
0.0002
1.32
0.61
0.0018
0.67
0.55
0.61
0.62
4.82
0.0019
0.0004
0.0003
0.03
0.006


3525710
0.64
0.0005
1.29
0.64
0.0001
0.62
0.65
0.65
0.63
8.03
0.0002
0.0006
0.0004
0.03
0.001


3526383
0.63
0.0019
1.25
0.59
0.0095
0.46
0.73
0.64
0.57
3.04
0.0052
0.0499
0.0366
0.13
0.027


3527530
0.62
0.0034
1.33
0.6
0.0064
0.6
0.59
0.6
0.59
4.61
0.0063
0.0049
0.0036
0.01
0.002


3528208
0.6
0.0135
1.35
0.6
0.0064
0.56
0.63
0.61
0.58
4.77
0.0043
0.0318
0.0225
0.46
0.13


3529094
0.62
0.0039
1.28
0.62
0.0011
0.62
0.61
0.62
0.61
4.74
0.002
0.0044
0.0045
0.14
0.031


3531094
0.63
0.0013
1.33
0.57
0.038
0.5
0.64
0.59
0.56
5.34
0.0448
0.0041
0.0028
0.21
0.032


3531491
0.65
0.0003
1.47
0.63
0.0002
0.54
0.72
0.67
0.61
4.11
0.0001
0.0003
0.0003
0.1
0.007


3533452
0.64
0.0009
1.37
0.62
0.0007
0.64
0.6
0.63
0.62
6.32
0.001
0.0009
0.0009
0.03
0.002


3534950
0.68
0
1.41
0.65
0
0.61
0.68
0.67
0.63
6.12
0
0
0
0.01
0.001


3535917
0.61
0.0084
1.25
0.59
0.0138
0.5
0.67
0.61
0.57
4.79
0.0108
0.0196
0.0119
0.09
0.016


3536669
0.64
0.0006
1.26
0.65
0
0.52
0.79
0.72
0.62
6.07
0
0.0005
0.0005
0.01
0.001


3536745
0.64
0.0004
1.41
0.59
0.0095
0.5
0.68
0.62
0.57
4.96
0.0209
0.0025
0.0011
0.04
0.008


3536931
0.63
0.0021
1.29
0.59
0.0095
0.56
0.62
0.61
0.58
7.39
0.009
0.0024
0.0027
0.12
0.021


3536934
0.61
0.0084
1.29
0.62
0.0007
0.6
0.64
0.64
0.61
4.7
0.0008
0.0072
0.0078
0.08
0.019


3536938
0.61
0.0072
1.32
0.6
0.0042
0.57
0.63
0.62
0.59
5.98
0.007
0.0051
0.0062
0.12
0.039


3536943
0.66
0.0001
1.31
0.63
0.0002
0.6
0.66
0.65
0.62
5.91
0.0001
0
0.0001
0.01
0.001


3536948
0.64
0.0006
1.26
0.6
0.0064
0.53
0.66
0.62
0.58
6.2
0.0065
0.0005
0.0009
0.04
0.013


3536949
0.61
0.0058
1.52
0.6
0.0042
0.6
0.6
0.61
0.6
5.83
0.0056
0.003
0.0036
0.03
0.007


3536951
0.62
0.0038
1.49
0.59
0.0095
0.55
0.63
0.61
0.58
4.41
0.011
0.004
0.0045
0.04
0.014


3536992
0.61
0.0055
1.32
0.58
0.0276
0.48
0.68
0.61
0.56
3.98
0.0599
0.006
0.004
0.21
0.026


3536994
0.64
0.0007
1.32
0.62
0.0007
0.57
0.67
0.64
0.61
6.35
0.0012
0.001
0.0007
0.05
0.003


3537787
0.65
0.0004
1.29
0.65
0
0.55
0.74
0.69
0.62
5.2
0
0.0004
0.0003
0.1
0.008


3537795
0.6
0.0107
1.61
0.61
0.0028
0.63
0.58
0.61
0.61
5.36
0.0027
0.0086
0.0055
0.06
0.008


3537796
0.62
0.0047
1.5
0.59
0.0095
0.63
0.55
0.59
0.59
4.67
0.0113
0.0098
0.0057
0.03
0.004


3539104
0.63
0.0019
1.25
0.58
0.0197
0.52
0.64
0.6
0.57
6.42
0.0328
0.002
0.002
0.04
0.005


3539877
0.63
0.0014
1.34
0.6
0.0064
0.52
0.67
0.62
0.58
4.21
0.0136
0.0089
0.0043
0.07
0.018


3543929
0.64
0.0004
1.31
0.6
0.0064
0.66
0.53
0.59
0.6
6.37
0.0111
0.0007
0.0003
0.03
0.002


3544473
0.62
0.0024
1.3
0.61
0.0018
0.57
0.65
0.63
0.6
6.47
0.0017
0.0036
0.0026
0.03
0.003


3544890
0.61
0.0079
1.41
0.58
0.0197
0.53
0.63
0.6
0.57
4.49
0.0381
0.0078
0.0065
0.55
0.132


3545534
0.61
0.0052
1.37
0.61
0.0018
0.62
0.6
0.62
0.61
6.34
0.0022
0.0048
0.0038
0.04
0.005


3549043
0.61
0.0101
1.29
0.58
0.0276
0.51
0.64
0.6
0.56
5.29
0.0412
0.0149
0.0115
0.34
0.072


3550451
0.62
0.0044
1.37
0.63
0.0004
0.62
0.63
0.64
0.62
5.63
0.0003
0.0025
0.004
0.05
0.009


3550453
0.64
0.0009
1.26
0.63
0.0002
0.58
0.68
0.66
0.61
5.12
0.0002
0.0008
0.0013
0.06
0.038


3550455
0.61
0.0055
1.25
0.57
0.0513
0.42
0.72
0.61
0.55
3.91
0.0535
0.0147
0.0106
0.41
0.12


3552937
0.61
0.01
1.3
0.58
0.0197
0.56
0.6
0.59
0.57
4.66
0.0167
0.008
0.0155
0.22
0.153


3552938
0.61
0.0065
1.31
0.57
0.038
0.51
0.63
0.59
0.56
5.16
0.0371
0.0054
0.0083
0.04
0.02


3556198
0.64
0.0004
1.26
0.61
0.0018
0.56
0.66
0.63
0.6
7.24
0.001
0.0007
0.0005
0.05
0.007


3556224
0.65
0.0003
1.28
0.62
0.0007
0.62
0.62
0.63
0.62
5.68
0.0011
0.0009
0.0005
0.06
0.002


3556278
0.63
0.0019
1.34
0.61
0.0018
0.45
0.79
0.68
0.58
4.31
0.0008
0.002
0.0015
0.05
0.008


3556420
0.61
0.0066
1.35
0.61
0.0028
0.57
0.64
0.62
0.59
4.26
0.003
0.0071
0.0058
0.19
0.024


3558292
0.64
0.0008
1.32
0.62
0.0007
0.69
0.55
0.61
0.64
6.56
0.0009
0.0015
0.0011
0.03
0.003


3559519
0.64
0.0007
1.31
0.59
0.0138
0.42
0.77
0.65
0.56
4.33
0.0104
0.0009
0.0007
0.18
0.005


3559556
0.6
0.0117
1.25
0.58
0.0276
0.48
0.68
0.61
0.56
4.19
0.0242
0.0098
0.014
0.12
0.011


3562436
0.7
0
1.31
0.64
0.0001
0.49
0.81
0.72
0.6
3.49
0
0
0.0001
0.05
0.002


3563349
0.65
0.0004
1.26
0.63
0.0004
0.53
0.72
0.67
0.6
4.98
0.0001
0.0005
0.0007
0.04
0.009


3563970
0.62
0.0038
1.27
0.57
0.0513
0.46
0.68
0.6
0.55
4.02
0.0384
0.0049
0.0049
0.13
0.029


3566596
0.63
0.0019
1.39
0.62
0.0007
0.63
0.61
0.63
0.62
6.08
0.0005
0.0017
0.0015
0.02
0.002


3566603
0.6
0.0136
1.34
0.59
0.0138
0.64
0.53
0.59
0.59
5.5
0.0183
0.0177
0.0122
0.09
0.012


3566648
0.61
0.0076
1.26
0.58
0.0276
0.46
0.7
0.61
0.56
4.37
0.028
0.0061
0.0076
0.12
0.015


3566657
0.62
0.0033
1.32
0.6
0.0064
0.48
0.72
0.64
0.57
4.58
0.0013
0.0018
0.0042
0.01
0.012


3566993
0.61
0.007
1.29
0.58
0.0276
0.55
0.6
0.59
0.57
5.09
0.0416
0.0098
0.0087
0.08
0.022


3569346
0.65
0.0003
1.39
0.62
0.0007
0.52
0.72
0.66
0.6
4.98
0.0007
0.0003
0.0004
0.04
0.007


3569757
0.65
0.0002
1.32
0.61
0.0018
0.54
0.68
0.64
0.59
6.32
0.0019
0.0006
0.0003
0.02
0.001


3569759
0.65
0.0003
1.25
0.61
0.0018
0.57
0.65
0.63
0.6
5.88
0.0018
0.0003
0.0004
0.01
0.004


3569819
0.64
0.0006
1.31
0.61
0.0018
0.56
0.66
0.63
0.6
5.21
0.003
0.0022
0.0017
0.18
0.027


3570456
0.61
0.0066
1.25
0.61
0.0028
0.64
0.57
0.61
0.61
5.71
0.0039
0.0099
0.0077
0.06
0.009


3573155
0.6
0.0135
1.26
0.57
0.0513
0.53
0.6
0.58
0.56
4.88
0.058
0.0281
0.0173
0.22
0.031


3576551
0.61
0.0053
1.29
0.59
0.0095
0.65
0.53
0.59
0.6
5.7
0.0219
0.0069
0.0042
0.08
0.009


3576567
0.65
0.0003
1.43
0.62
0.0007
0.51
0.73
0.67
0.6
4.66
0.0001
0.0003
0.0006
0.01
0.004


3576712
0.62
0.0027
1.44
0.6
0.0064
0.51
0.68
0.63
0.58
4.77
0.0039
0.0016
0.0019
0.09
0.046


3576730
0.62
0.0031
1.38
0.6
0.0064
0.56
0.63
0.61
0.58
5.46
0.0092
0.0027
0.0025
0.11
0.066


3576939
0.63
0.0022
1.4
0.61
0.0028
0.68
0.53
0.6
0.62
5.89
0.003
0.0023
0.001
0.06
0.002


3576940
0.64
0.001
1.32
0.61
0.0028
0.56
0.65
0.63
0.59
5.96
0.0033
0.0018
0.0012
0.07
0.008


3577874
0.66
0.0001
1.42
0.62
0.0011
0.59
0.64
0.63
0.61
4.39
0.0022
0.0004
0.0002
0
0


3577898
0.63
0.0022
1.33
0.63
0.0002
0.63
0.63
0.64
0.63
5.37
0.0002
0.0017
0.0015
0.04
0.007


3577911
0.65
0.0002
1.29
0.64
0.0001
0.56
0.72
0.68
0.62
5.09
0
0.0002
0.0006
0.02
0.006


3578431
0.64
0.0005
1.3
0.63
0.0004
0.55
0.7
0.66
0.61
4.99
0.0004
0.0008
0.0007
0.06
0.004


3580188
0.61
0.0066
1.29
0.58
0.0276
0.52
0.63
0.6
0.56
5.28
0.027
0.0034
0.0083
0.04
0.038


3580204
0.61
0.0096
1.27
0.61
0.0018
0.55
0.67
0.64
0.59
6.72
0.0008
0.0056
0.006
0.05
0.013


3580587
0.62
0.0024
1.32
0.59
0.0095
0.52
0.66
0.62
0.58
3.5
0.0054
0.0029
0.0049
0.29
0.226


3580953
0.63
0.0015
1.27
0.58
0.0197
0.71
0.45
0.57
0.6
7.14
0.0262
0.006
0.005
0.09
0.008


3589660
0.61
0.0093
1.29
0.58
0.0276
0.46
0.7
0.61
0.56
4.64
0.0305
0.0167
0.0135
0.52
0.111


3590159
0.62
0.0042
1.29
0.6
0.0064
0.62
0.57
0.6
0.6
5.62
0.0063
0.0034
0.004
0.01
0.002


3590352
0.62
0.003
1.27
0.57
0.0513
0.51
0.62
0.58
0.55
5.27
0.0812
0.0043
0.0045
0.21
0.11


3591851
0.63
0.0014
1.28
0.6
0.0042
0.59
0.61
0.61
0.59
4.89
0.0054
0.001
0.0013
0.13
0.021


3591858
0.68
0
1.28
0.62
0.0011
0.58
0.65
0.63
0.6
7.39
0.0017
0.0001
0
0.02
0


3591985
0.6
0.0128
1.25
0.6
0.0042
0.59
0.61
0.61
0.59
5.29
0.0034
0.0101
0.0121
0.07
0.026


3592046
0.61
0.0056
1.37
0.62
0.0007
0.64
0.6
0.63
0.62
5.82
0.0021
0.01
0.0046
0.2
0.027


3592047
0.63
0.0015
1.29
0.63
0.0002
0.7
0.56
0.62
0.65
6.69
0.0003
0.004
0.0012
0.05
0.004


3592395
0.61
0.0101
1.27
0.55
0.1438
0.42
0.68
0.58
0.53
4.01
0.1404
0.0068
0.0123
0.05
0.011


3593171
0.62
0.0029
1.64
0.62
0.0007
0.61
0.63
0.63
0.61
5.39
0.0009
0.0019
0.0013
0.07
0.011


3594101
0.61
0.0059
1.28
0.6
0.0042
0.46
0.76
0.66
0.57
4.57
0.0026
0.026
0.0227
0.1
0.043


3595811
0.63
0.0023
1.26
0.61
0.0028
0.61
0.6
0.61
0.6
4.89
0.0018
0.0015
0.0027
0.38
0.146


3595872
0.62
0.0041
1.42
0.61
0.0028
0.6
0.61
0.62
0.6
5.13
0.0011
0.0028
0.0033
0.04
0.011


3596235
0.68
0
1.28
0.63
0.0002
0.6
0.66
0.65
0.62
3.58
0.0001
0
0.0001
0.01
0.002


3597406
0.61
0.0059
1.29
0.6
0.0064
0.6
0.59
0.6
0.59
6.28
0.0055
0.0033
0.0053
0.22
0.069


3597468
0.61
0.0067
1.25
0.58
0.0276
0.59
0.56
0.58
0.57
6.2
0.0178
0.0033
0.0069
0.06
0.029


3597671
0.66
0.0001
1.32
0.6
0.0042
0.58
0.62
0.61
0.59
5.41
0.0041
0
0.0001
0.05
0.009


3598717
0.63
0.0016
1.36
0.61
0.0028
0.64
0.57
0.61
0.61
6.44
0.0032
0.0032
0.0024
0.1
0.007


3599449
0.61
0.009
1.32
0.61
0.0018
0.54
0.68
0.64
0.59
4.41
0.0019
0.0148
0.009
0.58
0.1


3602509
0.65
0.0002
1.3
0.63
0.0002
0.67
0.59
0.63
0.64
5.42
0.0003
0.0004
0.0003
0.01
0.003


3605249
0.63
0.0014
1.3
0.61
0.0028
0.65
0.56
0.61
0.61
5.41
0.0036
0.001
0.0011
0.02
0.011


3606117
0.61
0.0075
1.25
0.61
0.0018
0.5
0.73
0.66
0.59
4.63
0.0008
0.0037
0.0055
0.09
0.101


3606409
0.66
0.0001
1.43
0.63
0.0002
0.63
0.63
0.64
0.63
5.58
0.0001
0.0001
0.0001
0.02
0.002


3608201
0.62
0.0046
1.25
0.6
0.0042
0.54
0.66
0.63
0.59
5.04
0.0027
0.0027
0.0042
0.04
0.026


3609166
0.63
0.0011
1.35
0.62
0.0011
0.59
0.64
0.63
0.61
5.15
0.0006
0.0015
0.0011
0.04
0.004


3615597
0.63
0.0016
1.26
0.62
0.0011
0.56
0.67
0.64
0.6
4.92
0.0003
0.0023
0.0031
0.01
0.012


3615604
0.63
0.0012
1.26
0.62
0.0007
0.5
0.74
0.67
0.59
6.26
0.0004
0.0024
0.0012
0.04
0.011


3615659
0.62
0.0038
1.29
0.62
0.0011
0.58
0.65
0.63
0.6
4.57
0.0012
0.0047
0.0039
0.05
0.023


3615989
0.61
0.0062
1.26
0.59
0.0138
0.55
0.62
0.6
0.58
4.52
0.0284
0.0038
0.0033
0.02
0.005


3621014
0.66
0.0001
1.44
0.63
0.0004
0.52
0.73
0.67
0.6
5.45
0.0001
0.0001
0.0001
0.02
0.003


3623329
0.64
0.001
1.38
0.63
0.0004
0.53
0.72
0.67
0.6
5.71
0.0002
0.0005
0.0007
0.02
0.007


3624199
0.64
0.0005
1.25
0.61
0.0018
0.54
0.68
0.64
0.59
6.12
0.0038
0.0012
0.0009
0.02
0.006


3624533
0.66
0.0001
1.33
0.63
0.0002
0.57
0.69
0.66
0.61
4.65
0.0001
0
0.0001
0
0.002


3624702
0.61
0.0078
1.33
0.58
0.0197
0.52
0.64
0.6
0.57
3.93
0.0249
0.0115
0.0083
0.08
0.014


3625565
0.62
0.0026
1.32
0.59
0.0095
0.44
0.76
0.65
0.56
3.93
0.0036
0.0079
0.0143
0.28
0.258


3626570
0.63
0.0016
1.29
0.61
0.0018
0.53
0.69
0.64
0.59
4.56
0.0007
0.0009
0.0014
0.09
0.009


3626585
0.63
0.0011
1.25
0.61
0.0018
0.58
0.64
0.63
0.6
5.82
0.0029
0.0008
0.0009
0.05
0.005


3626730
0.63
0.0016
1.44
0.62
0.0007
0.57
0.67
0.64
0.61
5.14
0.0006
0.0014
0.0015
0.06
0.01


3627045
0.64
0.0008
1.25
0.6
0.0064
0.49
0.71
0.64
0.57
5.25
0.001
0.0014
0.0018
0.01
0.011


3628011
0.61
0.0101
1.25
0.58
0.0197
0.47
0.7
0.62
0.56
4.75
0.0188
0.0111
0.0146
0.21
0.09


3628052
0.61
0.0059
1.25
0.59
0.0138
0.5
0.67
0.61
0.57
5.4
0.0128
0.006
0.0068
0.23
0.053


3628057
0.64
0.0006
1.26
0.62
0.0007
0.48
0.78
0.69
0.59
5.07
0.0002
0.0014
0.0008
0.05
0.007


3628471
0.64
0.0005
1.45
0.61
0.0018
0.6
0.62
0.62
0.6
6.06
0.0036
0.0008
0.0005
0.02
0.002


3628924
0.64
0.0007
1.31
0.58
0.0276
0.48
0.68
0.61
0.56
4.63
0.0344
0.0026
0.002
0.02
0.006


3630191
0.64
0.0006
1.38
0.64
0.0001
0.61
0.67
0.66
0.63
6.32
0.0001
0.0003
0.0005
0.02
0.002


3631414
0.65
0.0004
1.27
0.63
0.0002
0.45
0.83
0.73
0.59
4.2
0
0.0001
0.0005
0
0.002


3632170
0.6
0.0111
1.41
0.6
0.0064
0.63
0.56
0.6
0.6
6.09
0.0067
0.0096
0.0083
0.04
0.007


3633110
0.63
0.0012
1.37
0.58
0.0276
0.53
0.62
0.59
0.56
4.04
0.0305
0.0037
0.003
0.05
0.012


3633223
0.61
0.006
1.27
0.6
0.0042
0.66
0.54
0.6
0.61
6.33
0.0043
0.0053
0.0044
0.09
0.016


3633226
0.62
0.0024
1.41
0.6
0.0064
0.51
0.68
0.63
0.58
4.11
0.0033
0.0009
0.0018
0.01
0.009


3634074
0.62
0.0027
1.42
0.62
0.0011
0.64
0.59
0.62
0.62
5.31
0.0012
0.0034
0.0022
0.17
0.014


3643958
0.61
0.0075
1.32
0.59
0.0138
0.55
0.62
0.6
0.58
5.77
0.0187
0.0111
0.0076
0.22
0.024


3645267
0.64
0.0004
1.3
0.61
0.0018
0.65
0.57
0.61
0.62
7.04
0.0013
0.0004
0.0004
0.01
0.001


3645314
0.63
0.0022
1.34
0.61
0.0028
0.7
0.51
0.6
0.63
5.55
0.0041
0.0019
0.0017
0.02
0.005


3645591
0.63
0.0013
1.28
0.59
0.0095
0.59
0.59
0.6
0.59
4.87
0.0096
0.0049
0.0036
0.15
0.032


3647535
0.62
0.0031
1.31
0.61
0.0028
0.58
0.63
0.62
0.6
5.33
0.0025
0.0039
0.0041
0.1
0.02


3648373
0.62
0.0032
1.26
0.58
0.0276
0.5
0.65
0.6
0.56
4.62
0.0323
0.0045
0.0067
0.12
0.02


3651472
0.64
0.0008
1.26
0.61
0.0018
0.55
0.67
0.64
0.59
5.07
0.0009
0.0015
0.0015
0.03
0.005


3653349
0.63
0.0018
1.29
0.6
0.0042
0.55
0.65
0.62
0.59
4.92
0.002
0.0025
0.0042
0.1
0.068


3653673
0.63
0.0012
1.37
0.64
0.0001
0.65
0.62
0.64
0.64
6.32
0.0001
0.0011
0.0008
0.01
0.001


3655101
0.61
0.0092
1.56
0.61
0.0028
0.55
0.66
0.63
0.59
4.47
0.0037
0.0034
0.0039
0.09
0.026


3658610
0.66
0.0001
1.31
0.63
0.0004
0.54
0.71
0.66
0.6
5.67
0.0002
0
0.0001
0.01
0.001


3659201
0.6
0.0133
1.35
0.58
0.0276
0.51
0.64
0.6
0.56
5.34
0.0158
0.0172
0.0231
0.23
0.038


3659319
0.66
0.0001
1.46
0.64
0.0001
0.58
0.69
0.66
0.62
5.09
0.0002
0.0003
0.0002
0.03
0.003


3660917
0.62
0.005
1.26
0.59
0.0095
0.55
0.63
0.61
0.58
3.05
0.013
0.0215
0.0106
0.28
0.04


3660927
0.6
0.0107
1.26
0.57
0.0513
0.43
0.71
0.61
0.55
4.12
0.0105
0.0094
0.0164
0.13
0.091


3665635
0.61
0.0057
1.41
0.59
0.0138
0.61
0.56
0.59
0.59
5.24
0.0062
0.0036
0.0042
0.05
0.009


3666111
0.64
0.0006
1.27
0.63
0.0002
0.49
0.79
0.7
0.6
4.28
0.0001
0.0011
0.0009
0.02
0.004


3666869
0.64
0.0006
1.64
0.64
0.0001
0.56
0.71
0.67
0.61
4.89
0.0001
0.0004
0.0004
0.08
0.014


3668992
0.61
0.0051
1.3
0.6
0.0064
0.53
0.66
0.62
0.58
4.44
0.0017
0.0021
0.0043
0.1
0.046


3671113
0.62
0.004
1.28
0.57
0.0513
0.41
0.73
0.61
0.55
4.96
0.029
0.0021
0.0071
0.02
0.016


3677863
0.64
0.0005
1.27
0.61
0.0028
0.52
0.69
0.64
0.59
5.25
0.0045
0.0033
0.0019
0.08
0.016


3679601
0.62
0.0027
1.28
0.58
0.0276
0.5
0.66
0.6
0.56
4.47
0.0241
0.0027
0.0045
0.06
0.023


3683054
0.62
0.0028
1.53
0.63
0.0004
0.68
0.57
0.62
0.64
5.14
0.0004
0.0014
0.0014
0.11
0.01


3685080
0.61
0.0075
1.29
0.58
0.0276
0.49
0.67
0.6
0.56
3.73
0.0218
0.0017
0.0044
0.1
0.05


3687262
0.63
0.0014
1.27
0.63
0.0004
0.71
0.54
0.62
0.65
8.12
0.0006
0.0018
0.0013
0.09
0.008


3687792
0.62
0.0033
1.5
0.6
0.0042
0.57
0.63
0.62
0.59
5.65
0.0075
0.0026
0.0022
0.1
0.012


3690089
0.62
0.0026
1.41
0.58
0.0197
0.55
0.61
0.6
0.57
5.33
0.0218
0.0042
0.0027
0.1
0.006


3692857
0.61
0.0071
1.28
0.59
0.0138
0.54
0.63
0.6
0.57
5.34
0.0126
0.0105
0.007
0.38
0.066


3693546
0.62
0.005
1.31
0.57
0.038
0.58
0.56
0.58
0.57
5.36
0.0226
0.0063
0.0072
0.11
0.053


3693711
0.62
0.0025
1.35
0.59
0.0138
0.52
0.65
0.61
0.57
4.97
0.0113
0.003
0.0038
0.07
0.015


3693737
0.62
0.0031
1.26
0.65
0
0.65
0.64
0.65
0.64
7.19
0.0001
0.004
0.0026
0.18
0.038


3693746
0.64
0.0009
1.29
0.56
0.0889
0.36
0.77
0.61
0.54
5.2
0.0493
0.0037
0.0064
0.18
0.113


3696670
0.62
0.005
1.35
0.62
0.0007
0.55
0.69
0.65
0.6
5.01
0.0007
0.0069
0.0065
0.17
0.028


3697925
0.63
0.0021
1.27
0.59
0.0095
0.52
0.66
0.62
0.58
4.75
0.0147
0.0013
0.0017
0.21
0.033


3699559
0.64
0.0008
1.26
0.62
0.0011
0.56
0.67
0.64
0.6
4.82
0.0006
0.0008
0.0011
0.03
0.009


3701588
0.64
0.0008
1.26
0.6
0.0064
0.59
0.6
0.61
0.59
5.75
0.0205
0.0051
0.0014
0.09
0.006


3705531
0.61
0.0094
1.37
0.57
0.038
0.42
0.73
0.62
0.55
4.01
0.0426
0.0248
0.02
0.18
0.017


3707211
0.62
0.0046
1.43
0.6
0.0064
0.56
0.63
0.61
0.58
5.42
0.0079
0.0084
0.0048
0.07
0.009


3708006
0.6
0.0126
1.37
0.62
0.0011
0.66
0.57
0.61
0.62
6.34
0.0019
0.0052
0.0044
0.09
0.014


3709275
0.62
0.0033
1.29
0.59
0.0138
0.52
0.65
0.61
0.57
5.13
0.0077
0.0019
0.0031
0.09
0.023


3710735
0.65
0.0004
1.29
0.63
0.0002
0.66
0.6
0.63
0.63
4.04
0.0006
0.0016
0.0008
0.14
0.021


3714102
0.62
0.0038
1.28
0.58
0.0197
0.57
0.59
0.59
0.57
5
0.0398
0.0065
0.0033
0.18
0.011


3715142
0.66
0.0002
1.37
0.63
0.0004
0.61
0.64
0.64
0.62
5.39
0.0006
0.0001
0.0002
0.09
0.012


3715434
0.61
0.0101
1.26
0.59
0.0138
0.54
0.63
0.6
0.57
4.69
0.0183
0.0153
0.0116
0.2
0.07


3716021
0.63
0.0022
1.36
0.61
0.0018
0.61
0.61
0.62
0.61
4.77
0.002
0.0014
0.002
0.13
0.022


3716674
0.6
0.0113
1.26
0.59
0.0138
0.56
0.61
0.6
0.58
5.17
0.0244
0.022
0.0142
0.41
0.084


3716757
0.64
0.0009
1.28
0.65
0
0.62
0.68
0.67
0.64
5.39
0
0.0016
0.0019
0.03
0.004


3717647
0.67
0
1.27
0.65
0
0.54
0.76
0.7
0.62
5.34
0
0.0003
0.0002
0.07
0.004


3717681
0.62
0.0038
1.31
0.62
0.0007
0.55
0.69
0.65
0.6
5.48
0.0008
0.0033
0.0033
0.31
0.099


3717684
0.63
0.001
1.28
0.64
0.0001
0.6
0.68
0.66
0.63
6.96
0.0001
0.0019
0.001
0.13
0.008


3718837
0.63
0.0014
1.26
0.6
0.0042
0.78
0.42
0.58
0.65
6.39
0.0051
0.0033
0.0026
0.06
0.004


3719123
0.61
0.0091
1.68
0.59
0.0138
0.5
0.67
0.61
0.57
4.59
0.0069
0.007
0.0075
0.19
0.028


3720778
0.62
0.0033
1.33
0.63
0.0002
0.57
0.69
0.66
0.61
5.66
0.0002
0.0041
0.0028
0.23
0.034


3720990
0.63
0.0011
1.27
0.6
0.0042
0.54
0.66
0.63
0.59
7
0.0022
0.0013
0.0024
0.04
0.008


3722990
0.63
0.0013
1.27
0.61
0.0018
0.51
0.71
0.65
0.59
4
0.0018
0.0025
0.002
0.03
0.003


3723305
0.62
0.0029
1.39
0.59
0.0138
0.61
0.56
0.59
0.59
5.33
0.0215
0.0039
0.0029
0.07
0.014


3726811
0.63
0.0016
1.46
0.59
0.0138
0.52
0.65
0.61
0.57
4.63
0.0154
0.0035
0.0028
0.26
0.038


3728316
0.64
0.0005
1.26
0.62
0.0007
0.58
0.66
0.64
0.61
5.83
0.0016
0.0017
0.0005
0.26
0.009


3729194
0.62
0.003
1.33
0.59
0.0095
0.54
0.64
0.61
0.58
4.39
0.0188
0.0049
0.0046
0.08
0.016


3729227
0.63
0.0023
1.35
0.62
0.0011
0.58
0.65
0.63
0.6
6.23
0.0018
0.003
0.0022
0.03
0.005


3732475
0.65
0.0002
1.39
0.63
0.0004
0.56
0.69
0.66
0.61
5.12
0.0003
0.0004
0.0003
0.03
0.003


3732477
0.62
0.0024
1.27
0.62
0.0007
0.55
0.69
0.65
0.6
4.33
0.0002
0.0017
0.004
0.07
0.024


3732479
0.63
0.0019
1.27
0.61
0.0028
0.53
0.68
0.64
0.59
6.12
0.0033
0.0027
0.002
0.22
0.023


3732480
0.67
0
1.35
0.61
0.0018
0.51
0.71
0.65
0.59
3.5
0.0014
0.0002
0.0002
0.03
0.001


3734754
0.63
0.0016
1.62
0.6
0.0042
0.64
0.56
0.6
0.6
5.01
0.0037
0.0015
0.001
0.01
0.002


3734863
0.61
0.0056
1.38
0.58
0.0276
0.55
0.6
0.59
0.57
5.95
0.021
0.0037
0.0053
0.04
0.016


3737304
0.63
0.002
1.3
0.63
0.0004
0.54
0.71
0.66
0.6
5.7
0.0003
0.0059
0.0043
0.13
0.013


3737985
0.61
0.0053
1.28
0.62
0.0011
0.64
0.59
0.62
0.62
6.8
0.0015
0.0049
0.0044
0.08
0.014


3738300
0.61
0.0064
1.29
0.62
0.0011
0.68
0.55
0.61
0.63
6.91
0.0018
0.0069
0.004
0.06
0.007


3739125
0.63
0.0012
1.56
0.61
0.0028
0.55
0.66
0.63
0.59
4.25
0.0031
0.0042
0.0026
0.07
0.016


3739523
0.63
0.0014
1.39
0.6
0.0064
0.5
0.7
0.63
0.58
5.3
0.0048
0.0024
0.0017
0.26
0.064


3740129
0.64
0.0008
1.46
0.63
0.0004
0.65
0.6
0.63
0.63
5.47
0.0004
0.0007
0.0006
0
0.001


3740130
0.63
0.002
1.58
0.61
0.0028
0.57
0.64
0.62
0.59
5.15
0.002
0.0026
0.0024
0.03
0.007


3744423
0.61
0.0064
1.3
0.63
0.0002
0.67
0.59
0.63
0.64
7.58
0.0002
0.0092
0.0084
0.23
0.029


3746953
0.61
0.006
1.27
0.57
0.038
0.45
0.7
0.61
0.55
4.11
0.0237
0.0041
0.0099
0.12
0.047


3746967
0.6
0.0135
1.3
0.59
0.0095
0.48
0.71
0.63
0.57
5.09
0.0068
0.0232
0.0125
0.08
0.016


3747223
0.64
0.0006
1.38
0.66
0
0.6
0.71
0.69
0.64
6.51
0
0.0006
0.0005
0.03
0.002


3748953
0.6
0.0133
1.32
0.58
0.0276
0.56
0.59
0.59
0.57
4.8
0.0439
0.0129
0.0097
0.11
0.019


3750786
0.61
0.0093
1.35
0.62
0.0011
0.68
0.55
0.61
0.63
5.19
0.001
0.0102
0.007
0.11
0.011


3752711
0.6
0.0111
1.34
0.61
0.0028
0.7
0.51
0.6
0.63
5.53
0.0019
0.0084
0.0089
0.04
0.009


3754530
0.64
0.0005
1.32
0.62
0.0011
0.59
0.64
0.63
0.61
4.86
0.0006
0.0003
0.0006
0.01
0.003


3754741
0.6
0.0117
1.29
0.6
0.0064
0.56
0.63
0.61
0.58
4.08
0.0102
0.0456
0.0305
0.13
0.023


3756204
0.61
0.0078
1.25
0.6
0.0064
0.54
0.65
0.62
0.58
6.24
0.0028
0.006
0.0078
0.05
0.013


3759590
0.62
0.0027
1.29
0.59
0.0138
0.52
0.65
0.61
0.57
4.14
0.0165
0.0052
0.0048
0.12
0.032


3760197
0.62
0.0029
1.32
0.57
0.0513
0.6
0.53
0.57
0.57
4.46
0.0636
0.0068
0.004
0.21
0.022


3761752
0.63
0.002
1.26
0.6
0.0064
0.54
0.65
0.62
0.58
4.7
0.0225
0.0101
0.0028
0.48
0.041


3762575
0.64
0.0006
1.42
0.58
0.0197
0.55
0.61
0.6
0.57
5.23
0.0256
0.0013
0.001
0.06
0.015


3764121
0.63
0.0014
1.32
0.61
0.0028
0.64
0.57
0.61
0.61
6.19
0.0044
0.0018
0.0014
0.04
0.004


3764125
0.63
0.0019
1.26
0.62
0.0007
0.62
0.62
0.63
0.62
5.95
0.0005
0.0012
0.0012
0.03
0.004


3764127
0.62
0.0032
1.27
0.62
0.0011
0.55
0.68
0.64
0.6
4.63
0.0011
0.012
0.0069
0.29
0.106


3764884
0.61
0.0064
1.32
0.61
0.0028
0.61
0.6
0.61
0.6
5.36
0.0015
0.0062
0.0052
0.1
0.028


3764921
0.64
0.0007
1.4
0.6
0.0064
0.56
0.63
0.61
0.58
6.37
0.0159
0.0011
0.0008
0.04
0.005


3765738
0.61
0.0062
1.34
0.62
0.0011
0.53
0.7
0.65
0.59
4.6
0.0005
0.0068
0.0086
0.07
0.045


3765761
0.62
0.0042
1.25
0.61
0.0028
0.6
0.61
0.62
0.6
5.63
0.0021
0.0031
0.0039
0.25
0.083


3765767
0.61
0.008
1.31
0.58
0.0197
0.5
0.66
0.61
0.57
4
0.0195
0.0193
0.0184
0.2
0.141


3766896
0.61
0.0083
1.29
0.58
0.0276
0.5
0.66
0.6
0.56
4.94
0.0307
0.0178
0.0118
0.16
0.063


3768039
0.65
0.0003
1.35
0.62
0.0007
0.5
0.76
0.68
0.59
4.62
0.0001
0.001
0.0015
0.03
0.019


3768121
0.63
0.0014
1.25
0.6
0.0042
0.52
0.68
0.63
0.58
4.98
0.0029
0.0047
0.0035
0.07
0.031


3768258
0.63
0.0012
1.29
0.61
0.0018
0.59
0.63
0.63
0.6
4.37
0.0012
0.0029
0.002
0.16
0.029


3769780
0.63
0.0022
1.26
0.63
0.0004
0.59
0.66
0.65
0.61
6.27
0.0003
0.0029
0.002
0.11
0.015


3770244
0.62
0.0032
1.25
0.62
0.0007
0.53
0.71
0.66
0.6
8.23
0.0003
0.0023
0.0025
0.14
0.02


3770564
0.62
0.0028
1.36
0.62
0.0011
0.66
0.57
0.61
0.62
6.2
0.0008
0.0027
0.0023
0.06
0.015


3770565
0.6
0.0114
1.31
0.59
0.0095
0.56
0.62
0.61
0.58
6.42
0.006
0.0092
0.0084
0.17
0.041


3770746
0.62
0.0051
1.35
0.59
0.0095
0.57
0.61
0.6
0.58
6.91
0.0092
0.009
0.0056
0.11
0.019


3771039
0.61
0.0076
1.28
0.6
0.0064
0.48
0.72
0.64
0.57
5.11
0.0024
0.0074
0.0087
0.16
0.057


3771094
0.63
0.0022
1.43
0.6
0.0042
0.52
0.68
0.63
0.58
4.09
0.0056
0.0064
0.0027
0.12
0.015


3771337
0.61
0.0057
1.64
0.61
0.0018
0.59
0.63
0.63
0.6
4.64
0.0025
0.0081
0.0041
0.15
0.015


3776189
0.65
0.0002
1.36
0.63
0.0002
0.56
0.7
0.66
0.61
6.15
0.0001
0.0007
0.0004
0.01
0.002


3776219
0.6
0.0133
1.25
0.6
0.0064
0.49
0.71
0.64
0.57
4.26
0.0042
0.0223
0.0174
0.1
0.045


3776236
0.63
0.0014
1.29
0.58
0.0276
0.39
0.78
0.64
0.55
3.87
0.0368
0.0045
0.0024
0.04
0.014


3776446
0.61
0.0062
1.49
0.59
0.0138
0.53
0.64
0.61
0.57
4.89
0.0141
0.0091
0.0076
0.08
0.014


3776461
0.62
0.0027
1.25
0.6
0.0064
0.58
0.61
0.61
0.59
6.29
0.0082
0.0052
0.0035
0.03
0.005


3778266
0.66
0.0001
1.29
0.61
0.0018
0.57
0.65
0.63
0.6
6.28
0.0024
0.0004
0.0002
0.03
0.003


3778629
0.65
0.0003
1.41
0.64
0.0001
0.58
0.7
0.67
0.62
6.43
0.0001
0.0003
0.0003
0.04
0.003


3778630
0.63
0.0011
1.34
0.59
0.0138
0.63
0.54
0.59
0.59
6.04
0.0224
0.002
0.0011
0.09
0.012


3779850
0.62
0.0026
1.27
0.55
0.114
0.39
0.72
0.59
0.53
4.22
0.1004
0.007
0.007
0.1
0.04


3781686
0.6
0.0122
1.26
0.55
0.1438
0.42
0.68
0.58
0.53
3.38
0.0685
0.0308
0.0676
0.06
0.07


3781689
0.63
0.0012
1.29
0.59
0.0138
0.53
0.64
0.61
0.57
5.5
0.0105
0.0012
0.0018
0.01
0.003


3783364
0.61
0.0058
1.26
0.58
0.0197
0.56
0.6
0.59
0.57
6.36
0.0142
0.0052
0.0072
0.02
0.008


3787934
0.66
0.0001
1.31
0.64
0.0001
0.57
0.7
0.67
0.62
6.26
0.0001
0
0
0
0.001


3789817
0.62
0.004
1.34
0.59
0.0095
0.5
0.68
0.62
0.57
5.3
0.0081
0.0079
0.0062
0.12
0.012


3795442
0.64
0.0007
1.27
0.58
0.0197
0.49
0.68
0.61
0.56
4.08
0.0088
0.0003
0.0014
0.02
0.046


3796554
0.61
0.0067
1.3
0.57
0.038
0.44
0.71
0.61
0.55
4.53
0.0236
0.019
0.0175
0.18
0.093


3798470
0.67
0.0001
1.42
0.63
0.0004
0.58
0.67
0.65
0.61
5.95
0.0004
0.0001
0.0001
0.01
0.001


3800623
0.61
0.0083
1.25
0.59
0.0138
0.56
0.61
0.6
0.58
4.9
0.0186
0.0126
0.0094
0.5
0.12


3804170
0.64
0.0005
1.3
0.58
0.0197
0.54
0.62
0.6
0.57
4.46
0.0214
0.0009
0.0008
0.03
0.002


3804202
0.63
0.0012
1.3
0.62
0.0011
0.56
0.67
0.64
0.6
4.59
0.001
0.0036
0.0023
0.05
0.018


3806255
0.64
0.0006
1.31
0.62
0.0007
0.64
0.6
0.63
0.62
6.72
0.0012
0.001
0.0007
0.06
0.005


3806256
0.61
0.0078
1.27
0.59
0.0138
0.48
0.7
0.62
0.57
4.44
0.021
0.0108
0.0129
0.05
0.019


3807476
0.61
0.0059
1.29
0.61
0.0018
0.52
0.7
0.65
0.59
4.95
0.0012
0.0046
0.0056
0.15
0.039


3807570
0.63
0.0013
1.34
0.62
0.0007
0.52
0.72
0.66
0.6
4.16
0.0002
0.0001
0.0005
0.1
0.054


3807629
0.65
0.0002
1.36
0.62
0.0007
0.5
0.76
0.68
0.59
4.56
0.0001
0
0.0002
0.01
0.011


3808602
0.64
0.0007
1.39
0.63
0.0004
0.63
0.62
0.63
0.62
7.24
0.0006
0.001
0.0006
0.02
0.001


3809343
0.62
0.003
1.36
0.61
0.0028
0.65
0.56
0.61
0.61
5.43
0.003
0.0024
0.0022
0.04
0.008


3809673
0.64
0.0008
1.36
0.62
0.0007
0.65
0.59
0.62
0.62
6.29
0.0006
0.0012
0.0009
0.03
0.004


3809834
0.67
0.0001
1.26
0.62
0.0011
0.5
0.73
0.66
0.59
5.07
0.0026
0.0004
0.0002
0.01
0.002


3813298
0.65
0.0003
1.3
0.59
0.0095
0.52
0.66
0.62
0.58
5.9
0.0084
0.0003
0.0005
0.06
0.009


3813299
0.62
0.0024
1.27
0.57
0.0513
0.44
0.7
0.6
0.55
4.8
0.0317
0.0022
0.0051
0.23
0.094


3815669
0.61
0.0079
1.35
0.58
0.0197
0.56
0.6
0.59
0.57
4.76
0.0292
0.0071
0.0064
0.08
0.016


3816402
0.6
0.0146
1.38
0.61
0.0028
0.57
0.64
0.62
0.59
4.49
0.0023
0.0122
0.0123
0.06
0.022


3820658
0.62
0.0024
1.29
0.61
0.0018
0.73
0.49
0.6
0.64
6.03
0.0031
0.0037
0.0027
0.07
0.012


3820705
0.61
0.0061
1.25
0.58
0.0197
0.6
0.56
0.59
0.58
6.12
0.0264
0.0065
0.007
0.25
0.049


3820721
0.62
0.0034
1.27
0.6
0.0064
0.69
0.5
0.59
0.61
5.6
0.0088
0.0056
0.0055
0.15
0.028


3820752
0.61
0.007
1.3
0.59
0.0095
0.56
0.62
0.61
0.58
4.68
0.0118
0.0133
0.0064
0.11
0.014


3822055
0.62
0.0039
1.38
0.61
0.0028
0.57
0.64
0.62
0.59
5.92
0.0011
0.0019
0.0037
0.01
0.01


3825428
0.62
0.0049
1.39
0.58
0.0197
0.59
0.57
0.59
0.58
5.49
0.014
0.0069
0.0048
0.05
0.005


3829039
0.63
0.0021
1.35
0.6
0.0064
0.56
0.63
0.61
0.58
4.81
0.0068
0.0039
0.0028
0.06
0.007


3829810
0.64
0.0004
1.56
0.62
0.0011
0.65
0.58
0.62
0.62
5.69
0.0008
0.0007
0.0005
0.01
0


3831128
0.61
0.0067
1.65
0.62
0.0011
0.61
0.62
0.63
0.61
4.89
0.0009
0.0049
0.0041
0.04
0.006


3831280
0.62
0.0035
1.26
0.61
0.0018
0.6
0.62
0.62
0.6
7.53
0.0019
0.0036
0.0027
0.06
0.007


3835412
0.64
0.0005
1.59
0.61
0.0028
0.52
0.69
0.64
0.59
3.94
0.0027
0.0042
0.0035
0.08
0.016


3837493
0.64
0.0009
1.32
0.59
0.0138
0.54
0.63
0.6
0.57
5.56
0.0188
0.0012
0.001
0.12
0.024


3838612
0.61
0.0087
1.27
0.62
0.0007
0.54
0.7
0.65
0.6
5.73
0.001
0.008
0.0069
0.26
0.037


3838790
0.63
0.0014
1.28
0.61
0.0018
0.53
0.69
0.64
0.59
4.65
0.0008
0.0027
0.0021
0.04
0.004


3840344
0.65
0.0004
1.25
0.6
0.0042
0.55
0.65
0.62
0.59
5.88
0.0055
0.0004
0.0004
0.14
0.021


3841271
0.63
0.0012
1.32
0.62
0.0007
0.54
0.7
0.65
0.6
4.78
0.0003
0.0027
0.0029
0.07
0.022


3843668
0.66
0.0001
1.36
0.64
0.0001
0.54
0.74
0.69
0.61
4.86
0
0.0002
0.0002
0.05
0.006


3845710
0.63
0.0018
1.29
0.61
0.0028
0.73
0.48
0.59
0.64
6.23
0.0038
0.0025
0.0014
0.07
0.006


3846115
0.62
0.0043
1.3
0.62
0.0011
0.57
0.66
0.64
0.6
5.13
0.0009
0.0033
0.0039
0.09
0.032


3846291
0.61
0.0063
1.26
0.59
0.0138
0.55
0.62
0.6
0.58
4.67
0.0263
0.015
0.0083
0.16
0.055


3846561
0.63
0.0015
1.26
0.61
0.0028
0.67
0.54
0.6
0.62
7.21
0.0022
0.0027
0.0028
0.15
0.012


3846784
0.62
0.0043
1.4
0.61
0.0018
0.65
0.57
0.61
0.62
6.04
0.0023
0.0028
0.0026
0.04
0.006


3847357
0.62
0.0047
1.32
0.62
0.0007
0.71
0.53
0.61
0.64
6.54
0.0008
0.0051
0.0039
0.03
0.003


3849774
0.61
0.0106
1.27
0.59
0.0095
0.56
0.62
0.61
0.58
5.84
0.0138
0.0185
0.0112
0.29
0.051


3849776
0.63
0.0019
1.26
0.62
0.0011
0.5
0.73
0.66
0.59
5.51
0.0006
0.0016
0.0018
0.2
0.02


3850502
0.64
0.0009
1.37
0.62
0.0007
0.64
0.6
0.63
0.62
5.57
0.0006
0.0013
0.0009
0.02
0.001


3851604
0.6
0.0138
1.27
0.63
0.0004
0.69
0.56
0.62
0.64
6.74
0.0003
0.0134
0.0108
0.2
0.017


3851902
0.62
0.004
1.44
0.61
0.0028
0.57
0.64
0.62
0.59
5.47
0.0015
0.0018
0.0044
0.03
0.02


3854371
0.63
0.0019
1.48
0.62
0.0007
0.52
0.72
0.66
0.6
3.6
0.0002
0.004
0.0045
0.02
0.012


3855101
0.61
0.0056
1.27
0.6
0.0064
0.57
0.62
0.61
0.59
6.36
0.0085
0.0061
0.0059
0.04
0.006


3856046
0.62
0.0035
1.27
0.57
0.038
0.45
0.7
0.61
0.55
4.39
0.0496
0.0083
0.0058
0.4
0.053


3857120
0.62
0.0028
1.3
0.61
0.0028
0.5
0.71
0.65
0.58
4.45
0.0015
0.0019
0.0024
0.19
0.066


3857884
0.67
0
1.3
0.65
0
0.57
0.73
0.69
0.63
5.25
0
0.0001
0.0001
0.02
0.001


3862168
0.63
0.0019
1.29
0.61
0.0018
0.67
0.55
0.61
0.62
8.4
0.0033
0.0022
0.0013
0.05
0.004


3862473
0.63
0.0013
1.27
0.59
0.0095
0.6
0.58
0.6
0.59
6.39
0.0079
0.0022
0.001
0.08
0.006


3867099
0.6
0.0112
1.27
0.62
0.0011
0.56
0.67
0.64
0.6
5.68
0.0015
0.0098
0.008
0.36
0.097


3869659
0.62
0.0045
1.27
0.57
0.038
0.51
0.63
0.59
0.56
4.47
0.0826
0.0092
0.0061
0.36
0.128


3869971
0.64
0.0009
1.37
0.59
0.0095
0.47
0.72
0.64
0.57
5.08
0.0112
0.0011
0.0009
0.09
0.004


3870593
0.64
0.0005
1.27
0.64
0.0001
0.63
0.65
0.65
0.63
6.4
0.0002
0.0008
0.0004
0.02
0.001


3872197
0.62
0.0024
1.73
0.62
0.0007
0.58
0.66
0.64
0.61
5.31
0.0008
0.0029
0.0018
0.22
0.015


3872208
0.62
0.0049
1.26
0.6
0.0042
0.57
0.63
0.62
0.59
5.65
0.0066
0.006
0.0044
0.19
0.024


3874114
0.65
0.0003
1.29
0.62
0.0007
0.55
0.69
0.65
0.6
3.09
0.0008
0.0022
0.0016
0.12
0.015


3874280
0.63
0.002
1.3
0.62
0.0007
0.7
0.54
0.61
0.64
7.41
0.0005
0.0036
0.0027
0.05
0.003


3875278
0.6
0.0148
1.34
0.57
0.038
0.53
0.61
0.59
0.56
4.97
0.0509
0.0203
0.0126
0.64
0.09


3878051
0.61
0.0066
1.45
0.59
0.0095
0.57
0.61
0.6
0.58
4.6
0.0096
0.0081
0.0047
0.13
0.027


3878053
0.65
0.0003
1.37
0.64
0.0001
0.64
0.64
0.65
0.64
7.19
0.0001
0.0004
0.0003
0.03
0.003


3879490
0.62
0.0037
1.27
0.54
0.1784
0.45
0.64
0.56
0.53
3.33
0.2201
0.0103
0.0098
0.27
0.09


3881731
0.64
0.0009
1.56
0.6
0.0064
0.63
0.56
0.6
0.6
4.8
0.0063
0.0015
0.001
0.02
0.003


3881914
0.63
0.0016
1.27
0.61
0.0028
0.54
0.67
0.63
0.59
6.52
0.0015
0.0014
0.0027
0.05
0.019


3882710
0.62
0.0037
1.4
0.61
0.0018
0.64
0.58
0.61
0.61
6.49
0.0015
0.0028
0.0028
0.07
0.025


3882867
0.64
0.0009
1.46
0.62
0.0007
0.57
0.67
0.64
0.61
5.07
0.0005
0.0014
0.0016
0.09
0.037


3883424
0.68
0
1.3
0.64
0.0001
0.62
0.65
0.65
0.63
7.1
0.0001
0
0
0.01
0.001


3883533
0.64
0.0009
1.26
0.65
0
0.6
0.7
0.68
0.63
6.41
0
0.0011
0.0009
0.06
0.005


3883537
0.63
0.0015
1.31
0.62
0.0007
0.55
0.69
0.65
0.6
6.1
0.0003
0.0016
0.0015
0.1
0.012


3883987
0.65
0.0003
1.28
0.63
0.0004
0.62
0.63
0.64
0.62
5.89
0.0018
0.0006
0.0003
0.02
0.001


3884147
0.62
0.0026
1.34
0.6
0.0042
0.57
0.63
0.62
0.59
5.86
0.0055
0.0031
0.0032
0.06
0.006


3884334
0.65
0.0004
1.27
0.63
0.0002
0.57
0.69
0.66
0.61
3.63
0.0001
0.0033
0.0013
0.01
0.001


3884673
0.63
0.0017
1.31
0.62
0.0011
0.51
0.72
0.66
0.59
3.9
0.0002
0.0006
0.0019
0.04
0.009


3884709
0.65
0.0002
1.28
0.62
0.0007
0.53
0.71
0.66
0.6
5.2
0.0005
0.0003
0.0002
0.18
0.014


3885711
0.62
0.0035
1.27
0.62
0.0011
0.6
0.63
0.63
0.61
6.49
0.0008
0.0035
0.0045
0.02
0.004


3886656
0.61
0.006
1.33
0.61
0.0018
0.5
0.72
0.65
0.59
5.12
0.0015
0.0096
0.0062
0.42
0.045


3886907
0.62
0.0037
1.27
0.63
0.0002
0.54
0.72
0.67
0.61
6.13
0.0001
0.004
0.0055
0.08
0.011


3887661
0.61
0.0054
1.25
0.59
0.0095
0.46
0.73
0.64
0.57
3.99
0.0092
0.0063
0.0049
0.35
0.057


3888081
0.64
0.0007
1.28
0.61
0.0018
0.51
0.71
0.65
0.59
5.18
0.0008
0.0003
0.001
0.05
0.023


3888182
0.61
0.0071
1.35
0.62
0.0011
0.71
0.52
0.61
0.64
6.72
0.0013
0.0087
0.0045
0.12
0.009


3888253
0.64
0.0004
1.35
0.62
0.0011
0.56
0.67
0.64
0.6
6.09
0.0006
0.0006
0.0004
0.01
0.001


3888289
0.63
0.0019
1.45
0.61
0.0018
0.64
0.58
0.61
0.61
5.85
0.003
0.0014
0.0015
0.05
0.005


3888494
0.6
0.0106
1.27
0.59
0.0095
0.56
0.62
0.61
0.58
6.07
0.0145
0.0143
0.0089
0.09
0.012


3888936
0.63
0.0013
1.3
0.59
0.0138
0.54
0.63
0.6
0.57
5.44
0.0348
0.0048
0.0019
0.13
0.016


3889140
0.66
0.0001
1.25
0.64
0.0001
0.55
0.72
0.67
0.61
6.4
0
0
0.0001
0.03
0.012


3889782
0.62
0.0043
1.34
0.59
0.0138
0.46
0.72
0.63
0.56
4
0.0055
0.0063
0.0073
0.03
0.012


3891221
0.6
0.0125
1.36
0.62
0.0011
0.6
0.63
0.63
0.61
4.76
0.0015
0.0088
0.0108
0.2
0.03


3891257
0.66
0.0002
1.28
0.61
0.0018
0.6
0.62
0.62
0.6
7.82
0.003
0.0003
0.0003
0.03
0.001


3892672
0.64
0.0007
1.28
0.64
0.0001
0.6
0.67
0.66
0.62
8.08
0.0001
0.0005
0.0009
0.09
0.012


3894074
0.61
0.0066
1.25
0.58
0.0276
0.5
0.66
0.6
0.56
3.6
0.0363
0.0046
0.0073
0.08
0.01


3894508
0.63
0.0013
1.49
0.62
0.0011
0.59
0.64
0.63
0.61
5.67
0.0011
0.0014
0.0008
0.03
0.001


3894602
0.61
0.0089
1.4
0.6
0.0042
0.63
0.57
0.6
0.6
5.52
0.0046
0.008
0.0058
0.09
0.012


3895000
0.61
0.0069
1.31
0.63
0.0004
0.65
0.6
0.63
0.63
6.22
0.0008
0.0065
0.0048
0.06
0.012


3896202
0.6
0.0144
1.39
0.57
0.038
0.52
0.62
0.59
0.56
5.28
0.04
0.0192
0.0162
0.08
0.019


3898306
0.6
0.0122
1.29
0.58
0.0276
0.53
0.62
0.59
0.56
3.04
0.0448
0.0531
0.0268
0.49
0.237


3901666
0.6
0.0115
1.35
0.6
0.0064
0.65
0.54
0.59
0.6
6.28
0.0079
0.0126
0.0109
0.07
0.011


3902984
0.64
0.0009
1.34
0.59
0.0095
0.54
0.64
0.61
0.58
5.5
0.0097
0.0015
0.0015
0.03
0.014


3903290
0.65
0.0004
1.32
0.64
0.0001
0.62
0.65
0.65
0.63
6.67
0.0002
0.0004
0.0002
0.04
0.005


3904028
0.64
0.0004
1.39
0.54
0.1784
0.3
0.8
0.6
0.52
4.37
0.1663
0.0014
0.0027
0.44
0.225


3904029
0.64
0.0005
1.25
0.63
0.0004
0.58
0.67
0.65
0.61
8.51
0.0008
0.0002
0.0004
0.04
0.006


3904255
0.64
0.0006
1.27
0.63
0.0002
0.58
0.68
0.66
0.61
5.76
0.0004
0.0015
0.0011
0.08
0.013


3904257
0.64
0.0005
1.34
0.64
0.0001
0.69
0.59
0.64
0.65
6.17
0.0001
0.0007
0.0005
0.1
0.014


3904276
0.64
0.0005
1.28
0.61
0.0018
0.57
0.65
0.63
0.6
4.36
0.0014
0.0012
0.0019
0.03
0.023


3904281
0.61
0.0081
1.27
0.61
0.0028
0.47
0.76
0.66
0.58
5.04
0.0004
0.0023
0.0035
0.19
0.034


3906196
0.61
0.008
1.31
0.59
0.0095
0.58
0.6
0.6
0.58
4.26
0.0182
0.009
0.0083
0.61
0.127


3907788
0.61
0.007
1.45
0.62
0.0007
0.62
0.62
0.63
0.62
5.04
0.0003
0.0049
0.005
0.04
0.012


3908789
0.62
0.0024
1.34
0.63
0.0002
0.62
0.64
0.64
0.62
7.29
0.0004
0.0015
0.001
0.14
0.009


3909376
0.61
0.0077
1.25
0.58
0.0276
0.5
0.66
0.6
0.56
3.83
0.0184
0.0035
0.0033
0.3
0.032


3911474
0.64
0.0007
1.36
0.62
0.0007
0.62
0.62
0.63
0.62
6.7
0.0013
0.0011
0.0005
0.07
0.003


3911564
0.65
0.0002
1.37
0.67
0
0.63
0.7
0.69
0.65
6.02
0
0.0002
0.0002
0.04
0.003


3911706
0.64
0.0006
1.31
0.63
0.0002
0.61
0.65
0.65
0.62
5.56
0.0004
0.0008
0.0007
0.03
0.002


3911738
0.66
0.0001
1.3
0.63
0.0004
0.65
0.6
0.63
0.63
7.3
0.0015
0.0003
0.0002
0.02
0.001


3911801
0.63
0.0016
1.44
0.63
0.0002
0.65
0.61
0.63
0.63
5.91
0.0003
0.0007
0.0007
0.02
0.002


3911815
0.62
0.004
1.48
0.61
0.0018
0.55
0.67
0.64
0.59
5.48
0.003
0.003
0.0028
0.13
0.019


3913564
0.62
0.0029
1.31
0.57
0.038
0.55
0.59
0.58
0.56
4.58
0.0329
0.0065
0.004
0.19
0.068


3915125
0.64
0.0006
1.35
0.57
0.0513
0.38
0.77
0.62
0.54
4.05
0.0575
0.0031
0.0023
0.03
0.004


3917896
0.65
0.0003
1.38
0.62
0.0007
0.6
0.64
0.64
0.61
5.35
0.0006
0.0012
0.0007
0.03
0.003


3918586
0.62
0.0031
1.37
0.61
0.0028
0.45
0.78
0.67
0.58
4.15
0.0018
0.0015
0.0016
0.09
0.017


3918651
0.61
0.0095
1.27
0.59
0.0138
0.54
0.63
0.6
0.57
4.24
0.0113
0.0074
0.0075
0.13
0.032


3918723
0.64
0.0007
1.32
0.64
0.0001
0.61
0.67
0.66
0.63
6.09
0.0001
0.0007
0.0011
0.09
0.012


3918734
0.63
0.0016
1.31
0.62
0.0011
0.56
0.67
0.64
0.6
4.43
0.0003
0.0011
0.0021
0.28
0.102


3919024
0.63
0.0012
1.4
0.65
0
0.76
0.54
0.63
0.69
6.04
0.0001
0.0007
0.0004
0.02
0.001


3920401
0.63
0.0012
1.38
0.6
0.0042
0.5
0.71
0.64
0.58
4.26
0.0031
0.0037
0.0031
0.25
0.033


3920456
0.64
0.0008
1.26
0.62
0.0011
0.63
0.6
0.62
0.61
6.62
0.0009
0.001
0.0009
0.15
0.01


3920487
0.66
0.0001
1.28
0.61
0.0028
0.54
0.67
0.63
0.59
5.06
0.0025
0.0002
0.0003
0.07
0.015


3922023
0.61
0.0053
1.29
0.55
0.114
0.32
0.8
0.62
0.53
4.57
0.0529
0.0052
0.011
0.06
0.059


3922993
0.63
0.0021
1.36
0.61
0.0018
0.59
0.63
0.63
0.6
4.28
0.0014
0.0026
0.0057
0.22
0.128


3924758
0.61
0.008
1.27
0.55
0.1438
0.4
0.7
0.58
0.53
4.56
0.2256
0.0594
0.0262
0.99
0.182


3925641
0.66
0.0001
1.29
0.59
0.0138
0.43
0.76
0.64
0.56
5.51
0.0025
0.0009
0.0009
0.15
0.072


3926090
0.63
0.001
1.28
0.62
0.0011
0.48
0.77
0.68
0.59
4.4
0.0002
0.0008
0.001
0.15
0.027


3927180
0.6
0.0122
1.49
0.59
0.0095
0.54
0.64
0.61
0.58
4.11
0.0143
0.016
0.0108
0.29
0.049


3927228
0.62
0.0029
1.26
0.6
0.0042
0.76
0.44
0.58
0.64
6.24
0.0048
0.0042
0.0027
0.06
0.008


3927229
0.64
0.0009
1.42
0.62
0.0011
0.66
0.57
0.61
0.62
5.6
0.0025
0.0015
0.0009
0.06
0.009


3928670
0.63
0.0011
1.31
0.6
0.0064
0.59
0.6
0.61
0.59
5.2
0.008
0.0011
0.0015
0.07
0.022


3929943
0.63
0.0018
1.36
0.59
0.0095
0.59
0.59
0.6
0.59
6.67
0.008
0.0008
0.0013
0.1
0.018


3934699
0.6
0.0124
1.4
0.61
0.0028
0.6
0.61
0.62
0.6
4.71
0.0037
0.0141
0.0112
0.34
0.081


3935246
0.61
0.0089
1.41
0.63
0.0004
0.63
0.62
0.63
0.62
4.97
0.0002
0.0101
0.0106
0.04
0.024


3935301
0.61
0.007
1.26
0.63
0.0004
0.65
0.6
0.63
0.63
7.03
0.0005
0.009
0.0075
0.12
0.014


3936897
0.62
0.0029
1.36
0.6
0.0064
0.51
0.68
0.63
0.58
4.69
0.0095
0.0085
0.0039
0.31
0.019


3939407
0.61
0.0069
1.27
0.63
0.0004
0.69
0.56
0.62
0.64
6.85
0.0008
0.0078
0.0044
0.09
0.005


3942668
0.62
0.0029
1.27
0.62
0.0011
0.62
0.61
0.62
0.61
7.02
0.0021
0.0038
0.0022
0.13
0.005


3945331
0.62
0.0026
1.42
0.62
0.0011
0.67
0.56
0.61
0.63
4.9
0.0018
0.0031
0.0019
0.08
0.008


3945370
0.63
0.0017
1.38
0.61
0.0018
0.5
0.72
0.65
0.59
5.23
0.0007
0.0038
0.0023
0.16
0.036


3946374
0.61
0.008
1.27
0.59
0.0138
0.44
0.74
0.64
0.56
4.93
0.0071
0.0068
0.0074
0.03
0.004


3946589
0.6
0.0116
1.29
0.57
0.038
0.51
0.63
0.59
0.56
5.2
0.0496
0.0169
0.0147
0.18
0.084


3946677
0.61
0.0071
1.31
0.58
0.0197
0.5
0.67
0.61
0.56
4.18
0.0159
0.0107
0.0124
0.24
0.132


3953804
0.63
0.0019
1.28
0.62
0.0011
0.65
0.58
0.62
0.62
4.64
0.0018
0.0023
0.0028
0.08
0.013


3956591
0.62
0.0049
1.28
0.61
0.0028
0.66
0.55
0.6
0.61
7.26
0.0092
0.0106
0.0034
0.14
0.019


3957262
0.63
0.0011
1.47
0.61
0.0028
0.51
0.7
0.64
0.58
5.05
0.0034
0.0026
0.0015
0.09
0.016


3959259
0.63
0.0015
1.25
0.61
0.0018
0.62
0.6
0.62
0.61
5.32
0.0004
0.0005
0.002
0.06
0.023


3959453
0.62
0.004
1.34
0.59
0.0095
0.61
0.57
0.6
0.59
6.98
0.0147
0.0054
0.0038
0.08
0.008


3960634
0.66
0.0001
1.52
0.62
0.0007
0.64
0.6
0.63
0.62
5.96
0.0006
0.0002
0.0002
0.03
0.002


3961482
0.62
0.004
1.26
0.6
0.0064
0.6
0.59
0.6
0.59
5.66
0.0059
0.0037
0.0029
0.11
0.01


3962268
0.64
0.0007
1.65
0.62
0.0007
0.66
0.58
0.62
0.63
5.98
0.0009
0.0004
0.0004
0.02
0.002


3962596
0.65
0.0002
1.42
0.61
0.0028
0.6
0.61
0.62
0.6
5.63
0.0024
0.0002
0.0002
0.07
0.005


3969510
0.62
0.0041
1.32
0.62
0.0011
0.48
0.77
0.68
0.59
4.12
0.0003
0.0049
0.0061
0.13
0.05


3969511
0.64
0.0008
1.65
0.64
0.0001
0.64
0.64
0.65
0.64
5.23
0.0001
0.0003
0.0003
0.02
0.004


3970894
0.66
0.0001
1.32
0.63
0.0004
0.64
0.61
0.63
0.63
7.89
0.0006
0.0002
0.0002
0.01
0


3974757
0.61
0.0063
1.29
0.55
0.114
0.5
0.6
0.57
0.54
4.69
0.079
0.0048
0.0121
0.04
0.052


3974789
0.63
0.0017
1.43
0.62
0.0007
0.59
0.65
0.64
0.61
5.33
0.0008
0.0017
0.0013
0.09
0.01


3981154
0.63
0.0014
1.42
0.62
0.0011
0.55
0.68
0.64
0.6
4.28
0.0011
0.0013
0.0015
0.25
0.027


3981752
0.62
0.0038
1.32
0.58
0.0276
0.51
0.64
0.6
0.56
5.23
0.0256
0.0037
0.0035
0.84
0.17


3981906
0.63
0.0011
1.34
0.62
0.0011
0.58
0.65
0.63
0.6
6.58
0.0007
0.0011
0.0012
0.06
0.008


3982421
0.6
0.012
1.38
0.62
0.0007
0.61
0.63
0.63
0.61
5.83
0.0013
0.0116
0.0095
0.15
0.024


3985558
0.63
0.0011
1.31
0.63
0.0004
0.64
0.61
0.63
0.63
7.57
0.0005
0.0009
0.0009
0.01
0.001


3985635
0.66
0.0001
1.51
0.61
0.0018
0.58
0.64
0.63
0.6
4.97
0.0019
0.0006
0.0003
0.1
0.004


3986857
0.62
0.0031
1.31
0.57
0.038
0.46
0.69
0.61
0.55
5.54
0.0584
0.0041
0.0035
0.06
0.003


3987532
0.6
0.0126
1.45
0.57
0.038
0.52
0.62
0.59
0.56
4.8
0.0561
0.0214
0.0129
0.31
0.051


3988214
0.61
0.0053
1.32
0.62
0.0011
0.56
0.67
0.64
0.6
5.55
0.001
0.0153
0.0097
0.16
0.027


3989205
0.63
0.0019
1.27
0.61
0.0018
0.67
0.55
0.61
0.62
6.95
0.0029
0.0012
0.0009
0.01
0.002


3989770
0.62
0.0048
1.29
0.6
0.0064
0.46
0.74
0.65
0.57
3.76
0.0068
0.0071
0.0049
0.27
0.017


3991722
0.61
0.0083
1.44
0.61
0.0028
0.51
0.7
0.64
0.58
4.63
0.002
0.0173
0.0135
0.04
0.005


3993347
0.61
0.0081
1.27
0.59
0.0138
0.54
0.63
0.6
0.57
7.42
0.0204
0.0062
0.007
0.09
0.024


3993349
0.63
0.002
1.35
0.62
0.0007
0.66
0.58
0.62
0.63
7.12
0.0007
0.002
0.0021
0.05
0.014


4004822
0.63
0.0013
1.26
0.66
0
0.6
0.71
0.69
0.64
5.18
0
0.0026
0.0021
0.07
0.023


4007593
0.62
0.0049
1.44
0.59
0.0095
0.57
0.61
0.6
0.58
5.78
0.0124
0.0081
0.0045
0.16
0.023


4009318
0.62
0.0024
1.31
0.63
0.0002
0.71
0.55
0.62
0.65
7.98
0.0003
0.0028
0.002
0.08
0.008


4009451
0.63
0.0018
1.26
0.61
0.0018
0.55
0.67
0.64
0.59
4.75
0.0007
0.0031
0.0045
0.08
0.038


4011604
0.61
0.0051
1.3
0.6
0.0064
0.64
0.55
0.6
0.6
5.92
0.0062
0.0047
0.0047
0.08
0.012


4011967
0.62
0.0029
1.26
0.6
0.0042
0.55
0.65
0.62
0.59
6.66
0.0034
0.0017
0.0026
0.05
0.011


4012169
0.63
0.0016
1.29
0.63
0.0002
0.55
0.71
0.67
0.61
6.31
0.0003
0.0026
0.0022
0.12
0.008


4012627
0.64
0.0006
1.3
0.63
0.0002
0.56
0.7
0.66
0.61
6.17
0.0003
0.0009
0.0007
0.08
0.005


4012632
0.63
0.0022
1.27
0.61
0.0018
0.52
0.7
0.65
0.59
4.67
0.001
0.0024
0.0025
0.16
0.04


4012759
0.63
0.0011
1.46
0.6
0.0064
0.52
0.67
0.62
0.58
4.18
0.0062
0.0023
0.0022
0.15
0.017


4013274
0.64
0.0005
1.29
0.62
0.0011
0.53
0.7
0.65
0.59
4.28
0.001
0.002
0.0017
0.1
0.014


4013282
0.65
0.0002
1.43
0.6
0.0042
0.58
0.62
0.61
0.59
5.8
0.004
0.0002
0.0002
0.05
0.009


4015535
0.65
0.0003
1.29
0.64
0.0001
0.65
0.63
0.65
0.64
5.1
0.0001
0.0001
0.0004
0
0.001


4016549
0.65
0.0002
1.48
0.63
0.0002
0.52
0.74
0.68
0.6
5.33
0.0001
0.0003
0.0003
0.05
0.006


4016573
0.63
0.001
1.29
0.61
0.0018
0.6
0.62
0.62
0.6
7.57
0.0029
0.0007
0.0005
0.04
0.004


4019367
0.62
0.0035
1.25
0.62
0.0011
0.58
0.65
0.63
0.6
5.61
0.0008
0.0017
0.0027
0.08
0.02


4019418
0.65
0.0003
1.26
0.65
0
0.67
0.63
0.65
0.65
5.4
0.0001
0.003
0.0011
0.08
0.011


4019610
0.63
0.0016
1.3
0.62
0.0011
0.65
0.58
0.62
0.62
6.07
0.002
0.0027
0.0014
0.13
0.012


4020462
0.64
0.0005
1.26
0.58
0.0197
0.43
0.74
0.63
0.56
4.86
0.0209
0.0031
0.0015
0.06
0.002


4024375
0.62
0.0026
1.44
0.62
0.0011
0.64
0.59
0.62
0.62
5.55
0.0011
0.0022
0.0028
0.05
0.01


4024376
0.62
0.0026
1.41
0.62
0.0011
0.55
0.68
0.64
0.6
5.48
0.0007
0.0031
0.0043
0.06
0.022


4024377
0.61
0.0082
1.29
0.59
0.0095
0.61
0.57
0.6
0.59
6.83
0.0111
0.0085
0.0086
0.2
0.055


4024378
0.62
0.0032
1.53
0.6
0.0064
0.55
0.64
0.62
0.58
5.34
0.0059
0.0024
0.0038
0.05
0.036


4024379
0.64
0.0005
1.46
0.61
0.0018
0.59
0.63
0.63
0.6
6.42
0.0017
0.0004
0.0005
0.01
0.002


4030986
0.66
0.0001
1.42
0.63
0.0004
0.52
0.73
0.67
0.6
5.64
0.0002
0.0001
0.0001
0.03
0.003


4034997
0.64
0.0005
1.33
0.62
0.0011
0.55
0.68
0.64
0.6
4.38
0.0008
0.0008
0.0014
0.04
0.014


4035834
0.62
0.0043
1.28
0.57
0.038
0.64
0.5
0.57
0.58
6.53
0.0797
0.0152
0.0075
0.35
0.053


4035835
0.67
0
1.35
0.65
0
0.55
0.76
0.7
0.62
4.43
0
0
0.0001
0.04
0.009


4035838
0.63
0.0013
1.28
0.62
0.0011
0.53
0.7
0.65
0.59
6.9
0.0013
0.0023
0.0016
0.13
0.031


4035839
0.63
0.0015
1.27
0.61
0.0018
0.58
0.64
0.63
0.6
6.89
0.0023
0.0017
0.0012
0.12
0.039


4040526
0.64
0.0007
1.31
0.61
0.0018
0.67
0.55
0.61
0.62
7.04
0.0017
0.001
0.0006
0.01
0.002


4041367
0.61
0.0088
1.27
0.57
0.0513
0.51
0.62
0.58
0.55
4.39
0.0584
0.0126
0.0127
0.03
0.011


4041822
0.63
0.0016
1.31
0.6
0.0042
0.73
0.47
0.59
0.63
5.7
0.0031
0.0016
0.0018
0.05
0.01


4043125
0.61
0.0071
1.28
0.58
0.0276
0.53
0.62
0.59
0.56
4.38
0.0533
0.0202
0.0115
0.58
0.054


4044199
0.62
0.0039
1.26
0.62
0.0011
0.57
0.66
0.64
0.6
6.34
0.0007
0.0053
0.0065
0.2
0.082


4044413
0.62
0.003
1.28
0.63
0.0004
0.55
0.7
0.66
0.61
4.54
0.0006
0.0095
0.0041
0.27
0.054


4047577
0.61
0.0085
1.42
0.63
0.0004
0.67
0.58
0.62
0.63
6.05
0.0006
0.0089
0.0043
0.18
0.014


4052399
0.65
0.0002
1.42
0.65
0
0.57
0.72
0.68
0.62
5.66
0
0.0005
0.0004
0.07
0.006


4055295
0.65
0.0002
1.4
0.6
0.0042
0.55
0.65
0.62
0.59
6.06
0.0033
0.0003
0.0002
0.11
0.016


4055302
0.66
0.0001
1.27
0.61
0.0028
0.54
0.67
0.63
0.59
5.2
0.0022
0.0003
0.0003
0.01
0.003


2720180
0.58
0.0585
1.53
0.57
0.038
0.56
0.58
0.58
0.56
5.14
0.0794
0.1125
0.0625
0.41
0.046


2347642
0.69
0
1.12
0.62
0.0011
0.42
0.83
0.71
0.58
6.34
0.0001
0
0.0001
0
0.002


2395344
0.68
0
1.17
0.65
0
0.75
0.55
0.63
0.68
4.74
0
0
0
0.01
0


2397069
0.69
0
1.12
0.65
0
0.57
0.72
0.68
0.62
6.12
0
0
0
0
0.003


2430377
0.69
0
1.09
0.63
0.0004
0.59
0.66
0.65
0.61
5.44
0.0007
0.0001
0
0
0.001


2448270
0.68
0
1.08
0.63
0.0004
0.61
0.64
0.64
0.62
6.84
0.001
0.0001
0
0.01
0


2553581
0.7
0
1.15
0.63
0.0004
0.58
0.67
0.65
0.61
5.17
0.0003
0
0
0
0.001


2600700
0.69
0
1.14
0.63
0.0002
0.66
0.6
0.63
0.63
4.66
0.0005
0
0
0
0


2624519
0.68
0
1.08
0.62
0.0007
0.74
0.5
0.6
0.65
4.49
0.0014
0.0004
0.0001
0.02
0


2651846
0.68
0
1.17
0.64
0.0001
0.68
0.6
0.64
0.65
2.99
0.0001
0
0
0
0.002


2682441
0.68
0
1.14
0.65
0
0.57
0.73
0.69
0.63
6.35
0
0
0
0.01
0.001


2704512
0.69
0
1.11
0.6
0.0042
0.53
0.67
0.63
0.58
4.5
0.0047
0
0
0
0


2704702
0.68
0
1.11
0.65
0
0.68
0.61
0.64
0.65
7.75
0.0001
0
0.0001
0.04
0.004


2902832
0.68
0
0.97
0.39
0.9996
0.5
0.28
0.42
0.35
6.72
0.001
0
0.0001
0.01
0.001


2918558
0.68
0
1.17
0.61
0.0018
0.4
0.84
0.71
0.57
4.99
0.0004
0.0001
0
0.01
0


3031661
0.69
0
0.95
0.35
1
0.55
0.14
0.4
0.24
6.09
0
0.0001
0
0.01
0


3212761
0.68
0
1.18
0.63
0.0002
0.58
0.68
0.66
0.61
4.32
0.0002
0
0.0001
0
0


3268183
0.68
0
1.04
0.63
0.0004
0.46
0.81
0.71
0.59
6.98
0.0001
0
0
0
0.001


3472753
0.69
0
0.96
0.37
1
0.42
0.32
0.39
0.34
7.01
0.0006
0.0001
0.0001
0
0


3501557
0.68
0
1.23
0.64
0.0001
0.58
0.69
0.66
0.62
4.53
0.0003
0.0001
0
0.01
0


3543621
0.69
0
0.91
0.37
1
0.51
0.21
0.4
0.3
4.9
0.0001
0.0001
0
0.04
0.002


3551833
0.69
0
1.13
0.65
0
0.58
0.72
0.69
0.63
6.09
0
0
0
0
0


3562041
0.69
0
1.24
0.64
0.0001
0.57
0.71
0.67
0.62
6.37
0
0
0
0
0


3661099
0.69
0
1.09
0.63
0.0004
0.51
0.74
0.68
0.6
6.7
0.0003
0
0.0001
0.1
0.013


3667907
0.69
0
1.05
0.64
0.0001
0.56
0.72
0.68
0.62
8.01
0
0
0
0
0


3701840
0.68
0
1.09
0.61
0.0018
0.49
0.74
0.66
0.58
5.5
0.0009
0
0
0
0.001


3840609
0.69
0
1.21
0.63
0.0004
0.45
0.82
0.71
0.59
3.09
0.0001
0
0
0.02
0.004


3889144
0.7
0
1.13
0.64
0.0001
0.6
0.67
0.66
0.62
5.77
0
0
0
0
0


3889625
0.69
0
1.15
0.63
0.0002
0.58
0.68
0.66
0.61
5.32
0.0002
0
0
0
0


3897081
0.69
0
1.11
0.66
0
0.5
0.83
0.75
0.62
5.73
0
0
0
0.1
0.002


3902441
0.68
0
0.95
0.38
0.9999
0.47
0.3
0.41
0.35
6.22
0.0007
0.0001
0.0001
0.01
0.001


4026042
0.69
0
1.15
0.64
0.0001
0.61
0.66
0.65
0.63
7.8
0.0001
0
0
0.01
0.001









Performance of the 1,425 detected biomarkers across different metrics for the recurrence endpoint on the pooled discovery and validation cohort (n=199). See Example 2 for explanation of metrics.






















TABLE 19










ACCU-










Affymetrix

WILCOX


RACY





KM
UVA HR
UVA OR


Probeset

P-

ACCU-
P-
SENSI-
SPECIF-


CUT
P-
P-
P-


ID
AUC
VALUE
MFD
RACY
VALUE
TIVITY
ICITY
PPV
NPV
OFF
VALUE
VALUE
VALUE




























2318654
0.65
0.0052
1.33
0.64
0.5397
0.7
0.6
0.5
0.78
7.85
0.001
0.0038
0.0052


2318755
0.63
0.0113
1.66
0.67
0.2627
0.6
0.71
0.54
0.75
5.57
0.0005
0.0043
0.007


2320062
0.65
0.0054
1.26
0.64
0.4669
0.6
0.67
0.51
0.74
5.23
0.0014
0.0043
0.0091


2321661
0.65
0.006
1.43
0.64
0.5397
0.72
0.59
0.5
0.79
6.52
0.0012
0.0042
0.0049


2322383
0.63
0.012
1.47
0.63
0.611
0.66
0.61
0.49
0.76
5.18
0.0017
0.0078
0.0127


2325809
0.62
0.0233
1.38
0.61
0.7405
0.62
0.61
0.48
0.74
6.06
0.0111
0.0139
0.019


2327494
0.63
0.0164
1.38
0.63
0.611
0.68
0.6
0.49
0.77
6.31
0.0023
0.0069
0.0185


2327865
0.64
0.0082
1.46
0.61
0.7405
0.66
0.59
0.48
0.75
5.34
0.0037
0.0031
0.0059


2328504
0.67
0.0013
1.4
0.67
0.2627
0.7
0.65
0.53
0.79
6.54
0.0002
0.0013
0.0012


2328507
0.68
0.0005
1.34
0.66
0.3262
0.47
0.77
0.54
0.72
5.36
0.0045
0.0019
0.0022


2329019
0.65
0.004
1.3
0.64
0.5397
0.64
0.63
0.5
0.75
6.44
0.0016
0.0042
0.0052


2329798
0.65
0.0049
1.53
0.64
0.5397
0.62
0.65
0.5
0.75
4.79
0.0055
0.0085
0.0079


2330704
0.62
0.023
1.35
0.6
0.8429
0.64
0.57
0.46
0.73
4.95
0.0143
0.0153
0.0189


2331419
0.65
0.0043
1.32
0.62
0.6786
0.47
0.71
0.48
0.7
4.58
0.0358
0.0118
0.0099


2331842
0.61
0.0405
1.33
0.64
0.5397
0.6
0.66
0.5
0.74
5.92
0.0044
0.0215
0.0302


2332192
0.67
0.0012
1.61
0.64
0.5397
0.51
0.71
0.5
0.72
5.14
0.0079
0.0023
0.0031


2332740
0.66
0.002
1.48
0.67
0.206
0.57
0.73
0.55
0.75
3.69
0.0004
0.001
0.0026


2334302
0.66
0.0028
1.33
0.67
0.2627
0.72
0.63
0.53
0.8
6.17
0.0001
0.0016
0.0021


2336960
0.66
0.003
1.31
0.64
0.4669
0.62
0.66
0.51
0.75
6.62
0.0011
0.0018
0.0028


2339310
0.64
0.0065
1.43
0.67
0.2627
0.55
0.73
0.54
0.74
4.64
0.0014
0.0039
0.0054


2342617
0.64
0.0104
1.3
0.61
0.7405
0.51
0.67
0.47
0.71
4.46
0.0632
0.0188
0.0159


2345634
0.66
0.0024
1.44
0.6
0.8429
0.64
0.57
0.46
0.73
4.69
0.0111
0.0009
0.0021


2345663
0.7
0.0001
1.29
0.64
0.4669
0.74
0.59
0.51
0.8
4.44
0.0009
0.0001
0.0003


2345666
0.6
0.0676
1.36
0.63
0.611
0.51
0.7
0.49
0.71
4.25
0.0106
0.0392
0.0587


2346911
0.63
0.0141
1.27
0.64
0.4669
0.55
0.7
0.51
0.73
7.17
0.0048
0.0092
0.0129


2346912
0.62
0.0189
1.37
0.61
0.7405
0.4
0.73
0.46
0.68
3.88
0.1237
0.0236
0.0198


2347108
0.64
0.0096
1.34
0.63
0.611
0.45
0.73
0.49
0.7
6.04
0.0286
0.0121
0.0141


2348819
0.66
0.0029
1.37
0.65
0.3949
0.64
0.66
0.52
0.76
5.97
0.0009
0.0031
0.0035


2350305
0.62
0.0292
1.34
0.64
0.5397
0.62
0.65
0.5
0.75
5.19
0.0029
0.0131
0.0214


2350371
0.65
0.0043
1.25
0.62
0.6786
0.38
0.76
0.47
0.68
4.47
0.0896
0.0057
0.0056


2352268
0.69
0.0004
1.34
0.66
0.3262
0.64
0.67
0.53
0.76
6.24
0.0004
0.0005
0.001


2353492
0.63
0.017
1.27
0.64
0.5397
0.62
0.65
0.5
0.75
6.15
0.0021
0.0093
0.0192


2358275
0.59
0.0819
1.25
0.63
0.611
0.53
0.68
0.49
0.72
4.26
0.0187
0.0715
0.0886


2358923
0.64
0.0096
1.44
0.65
0.3949
0.7
0.62
0.52
0.78
6.94
0.0005
0.007
0.0096


2359857
0.67
0.0017
1.33
0.66
0.3262
0.66
0.66
0.53
0.77
4.36
0.0006
0.005
0.0044


2360078
0.66
0.0022
1.29
0.64
0.4669
0.55
0.7
0.51
0.73
7.34
0.0024
0.0011
0.0033


2360119
0.66
0.0024
1.32
0.67
0.206
0.68
0.67
0.54
0.79
7.4
0.0001
0.0021
0.0027


2360120
0.66
0.0021
1.25
0.62
0.6786
0.62
0.62
0.48
0.74
7.06
0.0072
0.0009
0.0016


2360340
0.63
0.0115
1.28
0.67
0.206
0.55
0.74
0.55
0.74
5.72
0.0007
0.0066
0.009


2360716
0.63
0.0141
1.28
0.61
0.7405
0.77
0.52
0.48
0.8
7.12
0.0016
0.0166
0.0204


2360962
0.68
0.001
1.36
0.65
0.3949
0.6
0.68
0.52
0.75
5.51
0.0008
0.0006
0.0013


2361031
0.58
0.1168
1.15
0.61
0.7405
0.45
0.71
0.47
0.69
3.33
0.06
0.1638
0.1501


2363064
0.67
0.0012
1.29
0.61
0.7405
0.66
0.59
0.48
0.75
6.45
0.0075
0.001
0.0012


2363334
0.62
0.0233
1.29
0.57
0.9388
0.53
0.6
0.43
0.69
5.01
0.0894
0.0173
0.0279


2363956
0.68
0.0006
1.28
0.67
0.206
0.51
0.77
0.56
0.73
4.57
0.0017
0.0055
0.0064


2365991
0.62
0.0187
1.61
0.61
0.7405
0.6
0.62
0.47
0.73
4.56
0.0113
0.0352
0.0361


2367178
0.67
0.0016
1.6
0.64
0.4669
0.68
0.62
0.51
0.77
4.92
0.0008
0.0019
0.0025


2367214
0.64
0.0094
1.46
0.61
0.7405
0.66
0.59
0.48
0.75
4.86
0.0047
0.0077
0.0097


2367236
0.63
0.0177
1.32
0.63
0.611
0.66
0.61
0.49
0.76
5.6
0.0024
0.0109
0.0171


2369830
0.68
0.0009
1.47
0.66
0.3262
0.66
0.66
0.53
0.77
4.54
0.0004
0.0012
0.0018


2370014
0.65
0.0038
1.26
0.61
0.7405
0.62
0.61
0.48
0.74
4.18
0.0105
0.001
0.004


2371291
0.66
0.0026
1.37
0.63
0.611
0.55
0.67
0.49
0.72
5.26
0.0078
0.0022
0.0059


2371339
0.64
0.0078
1.36
0.63
0.611
0.55
0.67
0.49
0.72
4.45
0.0111
0.0198
0.0222


2371796
0.67
0.0016
1.31
0.63
0.611
0.51
0.7
0.49
0.71
5.7
0.0134
0.0023
0.0036


2373002
0.64
0.0076
1.46
0.66
0.3262
0.57
0.71
0.53
0.74
4.06
0.0005
0.0133
0.016


2375035
0.66
0.002
1.4
0.65
0.3949
0.53
0.72
0.52
0.73
4.75
0.0033
0.002
0.0027


2375037
0.69
0.0004
1.27
0.67
0.2627
0.66
0.67
0.53
0.77
6.88
0.0002
0.0004
0.0006


2375675
0.65
0.0056
1.35
0.62
0.6786
0.7
0.57
0.49
0.77
4.68
0.003
0.0091
0.0072


2375780
0.64
0.0079
1.44
0.62
0.6786
0.62
0.62
0.48
0.74
5.94
0.006
0.006
0.008


2375850
0.68
0.0009
1.27
0.67
0.206
0.66
0.68
0.54
0.78
6.85
0.0001
0.0005
0.001


2375890
0.65
0.0053
1.41
0.6
0.7956
0.68
0.56
0.47
0.75
6.85
0.0055
0.0038
0.0047


2377473
0.7
0.0002
1.43
0.6
0.7956
0.66
0.57
0.47
0.75
4.47
0.0072
0.0002
0.0005


2377508
0.68
0.0009
1.63
0.63
0.611
0.68
0.6
0.49
0.77
5.88
0.0016
0.0005
0.0011


2378615
0.61
0.0303
1.35
0.61
0.7405
0.51
0.67
0.47
0.71
3.71
0.0266
0.0335
0.0664


2379787
0.67
0.0017
1.36
0.61
0.7405
0.77
0.52
0.48
0.8
4.65
0.0021
0.0015
0.0019


2383763
0.64
0.0069
1.3
0.63
0.611
0.66
0.61
0.49
0.76
6.36
0.0026
0.0055
0.0087


2389076
0.66
0.0026
1.38
0.65
0.3949
0.57
0.7
0.52
0.74
4.92
0.0014
0.0017
0.0032


2389079
0.68
0.0006
1.36
0.67
0.206
0.49
0.78
0.56
0.73
4.81
0.0007
0.0007
0.0012


2389084
0.63
0.0185
1.34
0.67
0.2627
0.49
0.77
0.55
0.72
5.29
0.0014
0.0051
0.0095


2389086
0.64
0.0066
1.29
0.64
0.5397
0.55
0.68
0.5
0.73
5.34
0.0075
0.0083
0.0102


2389817
0.68
0.0007
1.33
0.66
0.3262
0.57
0.71
0.53
0.74
7.11
0.0016
0.0012
0.0018


2394560
0.64
0.0094
1.73
0.6
0.8479
0.62
0.59
0.46
0.73
5.1
0.0164
0.0088
0.0103


2395192
0.66
0.0025
1.49
0.67
0.2627
0.55
0.73
0.54
0.74
6.47
0.0004
0.0005
0.0016


2395195
0.67
0.0016
1.26
0.61
0.7405
0.62
0.61
0.48
0.74
5.06
0.0119
0.0019
0.0033


2396421
0.63
0.0112
1.33
0.61
0.7405
0.57
0.63
0.47
0.72
4.36
0.0155
0.0106
0.0129


2400180
0.64
0.0086
1.32
0.6
0.8429
0.57
0.61
0.46
0.71
5.75
0.0214
0.0027
0.0075


2400323
0.63
0.013
1.3
0.6
0.8429
0.45
0.68
0.45
0.68
3.94
0.1368
0.0079
0.0162


2401277
0.73
0
1.39
0.7
0.0837
0.62
0.74
0.58
0.77
2.96
0
0
0.0002


2401288
0.69
0.0005
1.27
0.63
0.611
0.72
0.57
0.49
0.78
5.94
0.0008
0.0003
0.0005


2401350
0.69
0.0005
1.52
0.64
0.5397
0.66
0.62
0.5
0.76
5.08
0.0009
0.0004
0.0007


2401368
0.64
0.0106
1.31
0.69
0.1164
0.43
0.84
0.61
0.72
5.17
0.0005
0.0018
0.0038


2402210
0.66
0.003
1.22
0.64
0.4669
0.7
0.61
0.51
0.78
5.56
0.0006
0.0046
0.0073


2405379
0.65
0.0037
1.4
0.64
0.4669
0.64
0.65
0.51
0.76
5.51
0.0013
0.0037
0.0051


2406094
0.64
0.0064
1.43
0.65
0.3949
0.64
0.66
0.52
0.76
6.24
0.0005
0.0041
0.0073


2406148
0.65
0.0059
1.44
0.64
0.4669
0.74
0.59
0.51
0.8
6.23
0.0003
0.0047
0.0048


2407134
0.63
0.0177
1.36
0.64
0.4669
0.57
0.68
0.51
0.74
4.7
0.0021
0.0096
0.0161


2408880
0.62
0.0205
1.33
0.6
0.8429
0.53
0.63
0.45
0.7
4.7
0.0531
0.0151
0.0246


2410112
0.65
0.0042
1.35
0.63
0.611
0.72
0.57
0.49
0.78
5.4
0.0013
0.003
0.0027


2410528
0.63
0.0126
1.26
0.6
0.7956
0.79
0.5
0.47
0.8
6.06
0.001
0.0094
0.0138


2412669
0.64
0.0092
1.32
0.63
0.611
0.55
0.67
0.49
0.72
4.75
0.0104
0.0112
0.0112


2413580
0.64
0.008
1.3
0.64
0.4669
0.57
0.68
0.51
0.74
5.02
0.0023
0.0102
0.0125


2414030
0.68
0.001
1.52
0.64
0.4669
0.62
0.66
0.51
0.75
4.78
0.0079
0.002
0.0019


2414960
0.62
0.0194
1.36
0.6
0.8429
0.6
0.6
0.46
0.72
4.59
0.0172
0.0064
0.0202


2417788
0.64
0.0075
1.42
0.64
0.4669
0.62
0.66
0.51
0.75
4.86
0.0005
0.0063
0.0107


2418028
0.66
0.002
1.29
0.68
0.1571
0.62
0.72
0.56
0.77
5.81
0.0002
0.0024
0.0028


2419242
0.69
0.0005
1.34
0.63
0.611
0.43
0.74
0.49
0.69
4.65
0.0341
0.0014
0.0018


2419247
0.6
0.0698
1.25
0.64
0.5397
0.49
0.72
0.5
0.71
5.37
0.0119
0.0363
0.0436


2419276
0.67
0.0016
1.31
0.64
0.4669
0.7
0.61
0.51
0.78
5.71
0.0004
0.0013
0.0024


2420740
0.65
0.0048
1.54
0.6
0.7956
0.53
0.65
0.46
0.71
3.96
0.0525
0.0024
0.0031


2420839
0.65
0.0036
1.34
0.66
0.3262
0.47
0.77
0.54
0.72
4.98
0.0043
0.0014
0.0027


2421273
0.67
0.0012
1.33
0.69
0.1164
0.64
0.72
0.57
0.78
6.06
0
0.0009
0.0014


2421274
0.64
0.0068
1.31
0.65
0.3949
0.6
0.68
0.52
0.75
4.52
0.0016
0.0095
0.0146


2421932
0.64
0.0072
1.31
0.61
0.7405
0.74
0.54
0.48
0.79
6.5
0.0028
0.011
0.0083


2422519
0.65
0.0044
1.41
0.64
0.4669
0.57
0.68
0.51
0.74
4.8
0.0038
0.0041
0.0064


2423200
0.65
0.0062
1.37
0.65
0.3949
0.68
0.63
0.52
0.78
6.89
0.0005
0.0027
0.0042


2427009
0.6
0.05
1.51
0.6
0.7956
0.53
0.65
0.46
0.71
4.01
0.0398
0.0192
0.0271


2427501
0.65
0.0046
1.65
0.65
0.3949
0.68
0.63
0.52
0.78
4.76
0.0006
0.0024
0.0045


2427978
0.66
0.0021
1.43
0.66
0.3262
0.64
0.67
0.53
0.76
6.15
0.0007
0.0014
0.0016


2428394
0.68
0.0007
1.36
0.71
0.0583
0.68
0.72
0.58
0.8
6.19
0
0.0007
0.0009


2429071
0.67
0.0016
1.26
0.62
0.6786
0.45
0.72
0.48
0.69
4.47
0.0691
0.0068
0.0059


2429119
0.69
0.0003
1.39
0.67
0.206
0.68
0.67
0.54
0.79
5.43
0.0001
0.0004
0.0006


2439168
0.63
0.0134
1.43
0.57
0.9388
0.47
0.63
0.42
0.68
3.82
0.2306
0.03
0.0506


2429282
0.69
0.0004
1.38
0.67
0.206
0.57
0.73
0.55
0.75
4.96
0.0003
0.0008
0.001


2429309
0.67
0.0015
1.37
0.64
0.5397
0.68
0.61
0.5
0.77
6.53
0.0012
0.0008
0.0016


2429310
0.66
0.0022
1.66
0.62
0.6786
0.68
0.59
0.48
0.76
5.42
0.003
0.0012
0.0021


2433376
0.63
0.0149
1.33
0.64
0.4669
0.64
0.65
0.51
0.76
4.99
0.0012
0.0188
0.0224


2434721
0.63
0.0121
1.34
0.58
0.914
0.53
0.61
0.44
0.69
5.46
0.1464
0.016
0.0175


2435391
0.65
0.0049
1.36
0.64
0.4669
0.53
0.71
0.51
0.73
6.56
0.0035
0.0041
0.0079


2437095
0.63
0.0139
1.32
0.58
0.914
0.64
0.55
0.45
0.73
6.33
0.0342
0.0142
0.0147


2437537
0.6
0.0541
1.3
0.61
0.7405
0.45
0.71
0.47
0.69
5.24
0.0806
0.0959
0.0881


2437538
0.68
0.0008
1.51
0.62
0.6786
0.72
0.56
0.49
0.78
6.29
0.0019
0.0011
0.0009


2437680
0.65
0.0062
1.37
0.65
0.3949
0.62
0.67
0.52
0.75
4.52
0.0011
0.0171
0.0171


2437775
0.62
0.0261
1.31
0.64
0.5397
0.49
0.72
0.5
0.71
4.15
0.0219
0.0254
0.0273


2439041
0.6
0.0511
1.28
0.61
0.7405
0.55
0.65
0.47
0.72
4.52
0.0389
0.0635
0.0547


2440149
0.64
0.0082
1.32
0.61
0.7405
0.55
0.65
0.47
0.72
4.93
0.0155
0.0091
0.0159


2440513
0.67
0.001
1.33
0.62
0.6786
0.74
0.55
0.49
0.79
8.24
0.0009
0.0019
0.0026


2442702
0.62
0.0233
1.3
0.64
0.4669
0.51
0.72
0.51
0.72
5.53
0.0042
0.0145
0.0234


2443917
0.66
0.0024
1.34
0.65
0.3949
0.55
0.71
0.52
0.73
4.71
0.003
0.0026
0.0034


2444488
0.62
0.0236
1.32
0.65
0.3949
0.49
0.74
0.52
0.72
3.92
0.0049
0.0118
0.0235


2444489
0.62
0.0197
1.32
0.6
0.7956
0.36
0.74
0.45
0.67
4.42
0.1867
0.0227
0.0376


2448289
0.61
0.0391
1.28
0.64
0.5397
0.43
0.76
0.5
0.7
4.08
0.0437
0.0535
0.051


2448313
0.66
0.0032
1.47
0.64
0.5397
0.53
0.7
0.5
0.72
4.09
0.0079
0.0034
0.0061


2450669
0.64
0.0072
1.49
0.6
0.8429
0.6
0.6
0.46
0.72
5.06
0.0236
0.0053
0.0068


2451314
0.63
0.0137
1.36
0.63
0.611
0.6
0.65
0.49
0.74
4.55
0.0069
0.0025
0.0074


2452652
0.67
0.0011
1.43
0.66
0.3262
0.72
0.6
0.52
0.8
6.12
0.0001
0.001
0.0012


2452655
0.63
0.0121
1.5
0.65
0.3949
0.55
0.71
0.52
0.73
4.93
0.0018
0.007
0.0169


2457626
0.68
0.0005
1.3
0.67
0.2627
0.51
0.76
0.55
0.73
5.73
0.0015
0.0011
0.0013


2458075
0.62
0.0219
1.51
0.64
0.5397
0.57
0.67
0.5
0.73
5.28
0.0031
0.0125
0.0211


2458381
0.62
0.0292
1.2
0.58
0.914
0.47
0.65
0.43
0.68
4.9
0.2056
0.0113
0.0215


2458503
0.66
0.0026
1.33
0.64
0.5397
0.68
0.61
0.5
0.77
5.73
0.0014
0.0015
0.0023


2459655
0.65
0.0053
1.23
0.62
0.6786
0.47
0.71
0.48
0.7
6.48
0.0268
0.0041
0.0067


2461827
0.67
0.0015
1.32
0.67
0.2627
0.6
0.71
0.54
0.75
5.09
0.0004
0.002
0.003


2461828
0.67
0.0018
1.35
0.64
0.4669
0.66
0.63
0.51
0.76
5.29
0.0014
0.0024
0.0028


2462178
0.64
0.0074
1.34
0.58
0.914
0.55
0.6
0.44
0.7
4.45
0.0924
0.0027
0.0068


2464496
0.69
0.0005
1.58
0.67
0.2627
0.68
0.66
0.53
0.78
5.38
0.0002
0.0004
0.0008


2464505
0.68
0.001
1.35
0.67
0.206
0.68
0.67
0.54
0.79
6.3
0.0001
0.0007
0.0011


2464514
0.66
0.0025
1.32
0.64
0.4669
0.66
0.63
0.51
0.76
5.72
0.001
0.0024
0.0028


2464537
0.66
0.0024
1.41
0.67
0.206
0.62
0.71
0.55
0.76
5.7
0.0001
0.0012
0.0021


2468935
0.62
0.0271
1.24
0.6
0.8429
0.47
0.67
0.45
0.69
4.85
0.1455
0.0219
0.0241


2469568
0.7
0.0002
1.37
0.69
0.1164
0.62
0.73
0.57
0.77
4.27
0.0001
0.0005
0.001


2473241
0.68
0.0005
1.25
0.64
0.4669
0.53
0.71
0.51
0.73
4.8
0.008
0.0015
0.0023


2473624
0.66
0.002
1.66
0.64
0.5397
0.66
0.62
0.5
0.76
4.93
0.0018
0.0013
0.0019


2474147
0.61
0.0369
1.36
0.58
0.914
0.66
0.54
0.45
0.73
6.87
0.0257
0.0254
0.0377


2474700
0.67
0.0016
1.36
0.64
0.5397
0.72
0.59
0.5
0.79
5.15
0.0005
0.0018
0.0023


2474770
0.69
0.0004
1.42
0.68
0.1571
0.7
0.67
0.55
0.8
6.05
0
0.0004
0.0005


2475647
0.6
0.0529
1.33
0.61
0.7405
0.49
0.68
0.47
0.7
4.98
0.0592
0.0594
0.0558


2476316
0.7
0.0002
1.26
0.65
0.3949
0.64
0.66
0.52
0.76
4.67
0.001
0.0007
0.0013


2476408
0.65
0.0039
1.53
0.64
0.5397
0.6
0.66
0.5
0.74
5.02
0.0034
0.002
0.0036


2477341
0.64
0.0097
1.43
0.6
0.7956
0.6
0.61
0.47
0.72
5.4
0.019
0.0104
0.0102


2478839
0.65
0.0049
1.32
0.65
0.3949
0.66
0.65
0.52
0.77
6.62
0.0008
0.0028
0.0033


2479729
0.67
0.0016
1.38
0.61
0.7405
0.72
0.55
0.48
0.78
5.13
0.003
0.0011
0.0012


2480989
0.69
0.0004
1.36
0.64
0.4669
0.47
0.74
0.51
0.71
4.92
0.0068
0.0002
0.0006


2481178
0.66
0.0032
1.43
0.67
0.2627
0.64
0.68
0.54
0.77
5.04
0.0005
0.0024
0.0026


2482593
0.66
0.0033
1.32
0.63
0.611
0.53
0.68
0.49
0.72
5.54
0.0104
0.0035
0.0051


2482624
0.67
0.0011
1.28
0.62
0.6786
0.72
0.56
0.49
0.78
7.06
0.0017
0.0009
0.0012


2483047
0.65
0.0057
1.51
0.59
0.8822
0.53
0.62
0.45
0.7
5.04
0.0678
0.0075
0.011


2484558
0.67
0.0013
1.39
0.67
0.206
0.49
0.78
0.56
0.73
4.17
0.0011
0.0069
0.0071


2484807
0.67
0.0014
1.32
0.59
0.8822
0.77
0.49
0.46
0.78
6.35
0.0048
0.0017
0.0016


2485214
0.64
0.008
1.39
0.62
0.6786
0.6
0.63
0.48
0.73
5.47
0.0091
0.0079
0.0085


2485276
0.63
0.0121
1.25
0.6
0.8429
0.49
0.66
0.45
0.69
4.49
0.0798
0.0433
0.0454


2487216
0.63
0.0113
1.49
0.63
0.611
0.6
0.65
0.49
0.74
5.06
0.0075
0.0064
0.0112


2487645
0.67
0.0015
1.34
0.67
0.206
0.62
0.71
0.55
0.76
5.91
0.0001
0.0018
0.0024


2488150
0.65
0.0058
1.21
0.61
0.7405
0.6
0.62
0.47
0.73
5.01
0.0208
0.0063
0.0102


2489030
0.64
0.0071
1.43
0.64
0.5397
0.6
0.66
0.5
0.74
5.64
0.004
0.0099
0.0075


2489435
0.67
0.0014
1.32
0.63
0.611
0.64
0.62
0.49
0.75
6.14
0.0036
0.002
0.0019


2491645
0.65
0.0046
1.3
0.64
0.5397
0.66
0.62
0.5
0.76
6.43
0.0014
0.0042
0.0048


2492101
0.65
0.0057
1.24
0.61
0.7405
0.62
0.61
0.48
0.74
3.51
0.0114
0.0024
0.0087


2492833
0.61
0.0415
1.38
0.6
0.7956
0.53
0.65
0.46
0.71
5.89
0.0251
0.0207
0.0408


2495140
0.66
0.002
1.53
0.64
0.5397
0.68
0.61
0.5
0.77
4.83
0.0015
0.0015
0.0021


2498988
0.66
0.003
1.46
0.65
0.3949
0.53
0.72
0.52
0.73
4.54
0.0042
0.0041
0.0073


2507241
0.68
0.0008
1.5
0.67
0.2627
0.57
0.72
0.54
0.75
5.06
0.0008
0.0013
0.0017


2507514
0.66
0.0035
1.37
0.64
0.4669
0.66
0.63
0.51
0.76
6.06
0.0016
0.0032
0.0051


2507533
0.67
0.0017
1.38
0.66
0.3262
0.68
0.65
0.52
0.78
6.67
0.0002
0.001
0.0016


2512351
0.65
0.0042
1.31
0.65
0.3949
0.66
0.65
0.52
0.77
4.43
0.0009
0.01
0.0116


2512363
0.64
0.0068
1.55
0.63
0.611
0.57
0.66
0.49
0.73
3.74
0.0081
0.0036
0.0051


2512959
0.64
0.009
1.26
0.59
0.8822
0.55
0.61
0.45
0.7
3.88
0.0675
0.0218
0.0201


2515085
0.64
0.0098
1.33
0.64
0.4669
0.66
0.63
0.51
0.76
6.98
0.0009
0.0051
0.0081


2517330
0.66
0.003
1.41
0.67
0.206
0.45
0.8
0.57
0.72
4.39
0.0013
0.0051
0.0069


2518193
0.68
0.0007
1.27
0.62
0.6786
0.77
0.54
0.49
0.8
5.52
0.001
0.0005
0.0009


2518707
0.64
0.0083
1.47
0.6
0.7956
0.57
0.62
0.47
0.72
5.24
0.0156
0.0031
0.0087


2525095
0.69
0.0004
1.37
0.67
0.206
0.6
0.72
0.55
0.76
5.7
0.0002
0.0005
0.0012


2527206
0.67
0.0015
1.32
0.6
0.8429
0.72
0.52
0.47
0.77
8.07
0.0048
0.0016
0.002


2527635
0.68
0.0005
1.36
0.61
0.7405
0.53
0.66
0.47
0.71
5.16
0.0273
0.0008
0.0011


2532844
0.63
0.0153
1.25
0.64
0.5397
0.49
0.72
0.5
0.71
4.77
0.0142
0.0131
0.0184


2534447
0.67
0.0013
1.42
0.69
0.1164
0.55
0.77
0.58
0.75
5.8
0.0001
0.0021
0.0025


2537112
0.64
0.0064
1.36
0.64
0.5397
0.66
0.62
0.5
0.76
6.32
0.0013
0.0042
0.0081


2539775
0.68
0.0008
1.46
0.67
0.206
0.51
0.77
0.56
0.73
4.74
0.0007
0.0011
0.002


2540221
0.64
0.01
1.48
0.63
0.611
0.66
0.61
0.49
0.76
6.42
0.0035
0.0057
0.007


2544180
0.66
0.0031
1.37
0.64
0.4669
0.66
0.63
0.51
0.76
6.73
0.001
0.0024
0.0026


2544185
0.6
0.0573
1.27
0.6
0.8429
0.32
0.76
0.43
0.66
4.66
0.2278
0.0756
0.1259


2544295
0.65
0.0044
1.56
0.64
0.4669
0.6
0.67
0.51
0.74
4.64
0.003
0.0075
0.0078


2544306
0.64
0.0078
1.36
0.63
0.611
0.49
0.71
0.49
0.71
5.25
0.0202
0.0174
0.0194


2546279
0.67
0.0019
1.58
0.67
0.2627
0.66
0.67
0.53
0.77
5.37
0.0003
0.0023
0.0021


2549323
0.62
0.0261
1.29
0.61
0.7405
0.53
0.66
0.47
0.71
4.71
0.0268
0.0109
0.0253


2550840
0.64
0.0107
1.25
0.66
0.3262
0.57
0.71
0.53
0.74
4.88
0.0006
0.0104
0.0193


2550842
0.63
0.012
1.34
0.6
0.8429
0.43
0.7
0.44
0.68
3.89
0.1429
0.0194
0.0269


2550964
0.7
0.0002
1.39
0.68
0.1571
0.62
0.72
0.56
0.77
5.94
0.0001
0.0002
0.0003


2552021
0.65
0.0057
1.53
0.65
0.3949
0.51
0.73
0.52
0.72
5.1
0.0037
0.0024
0.0035


2553312
0.65
0.0056
1.29
0.63
0.611
0.64
0.62
0.49
0.75
5.71
0.0039
0.0066
0.0065


2553583
0.67
0.0017
1.33
0.59
0.8822
0.74
0.5
0.46
0.77
7.07
0.009
0.002
0.0023


2553585
0.63
0.0128
1.75
0.66
0.3262
0.57
0.71
0.53
0.74
5.35
0.0009
0.0045
0.0077


2553595
0.66
0.0031
1.43
0.63
0.611
0.6
0.65
0.49
0.74
5.33
0.0044
0.0019
0.0033


2553907
0.66
0.0024
1.3
0.64
0.4669
0.45
0.76
0.51
0.7
4.47
0.008
0.002
0.0055


2554001
0.63
0.013
1.7
0.65
0.3949
0.53
0.72
0.52
0.73
3.88
0.0027
0.0089
0.0105


2555279
0.64
0.0084
1.42
0.62
0.6786
0.57
0.65
0.48
0.73
5.58
0.019
0.0103
0.0088


2555281
0.68
0.0005
1.51
0.66
0.3262
0.53
0.73
0.53
0.73
4.3
0.0012
0.0006
0.0011


2555288
0.65
0.0049
1.34
0.65
0.3949
0.6
0.68
0.52
0.75
4.22
0.0017
0.0059
0.0101


2555330
0.64
0.01
1.2
0.64
0.4669
0.38
0.79
0.51
0.69
4.29
0.0305
0.0048
0.0087


2555409
0.65
0.0056
1.39
0.68
0.1571
0.57
0.74
0.56
0.75
4.38
0.0001
0.0021
0.007


2555411
0.66
0.0022
1.51
0.63
0.611
0.68
0.6
0.49
0.77
5.34
0.0025
0.0013
0.0019


2555416
0.67
0.0014
1.36
0.66
0.3262
0.55
0.72
0.53
0.74
5.26
0.0015
0.0017
0.0034


2555507
0.63
0.0115
1.27
0.63
0.611
0.34
0.79
0.48
0.68
4.25
0.0667
0.0178
0.0274


2555522
0.65
0.0061
1.26
0.63
0.611
0.77
0.55
0.49
0.8
5.16
0.0011
0.0088
0.0087


2556229
0.65
0.0039
1.41
0.62
0.6786
0.55
0.66
0.48
0.72
4.17
0.0168
0.0085
0.0089


2558208
0.64
0.0092
1.28
0.67
0.2627
0.49
0.77
0.55
0.72
4.49
0.0011
0.0037
0.0087


2558313
0.64
0.0071
1.29
0.64
0.5397
0.64
0.63
0.5
0.75
5.23
0.0026
0.0029
0.0044


2558519
0.68
0.0005
1.39
0.68
0.1571
0.62
0.72
0.56
0.77
5.82
0.0001
0.0004
0.0007


2559293
0.61
0.0467
1.15
0.65
0.3949
0.47
0.76
0.52
0.71
5.3
0.0041
0.0244
0.0409


2562334
0.68
0.0007
1.33
0.66
0.3262
0.72
0.62
0.52
0.8
6.74
0.0002
0.0005
0.0008


2565264
0.67
0.0011
1.36
0.66
0.3262
0.72
0.62
0.52
0.8
7.58
0.0001
0.0008
0.0011


2575142
0.64
0.0084
1.49
0.65
0.3949
0.6
0.68
0.52
0.75
4.58
0.0017
0.0069
0.0074


2577959
0.65
0.006
1.32
0.67
0.206
0.47
0.79
0.56
0.72
4.14
0.0015
0.0085
0.0103


2581588
0.64
0.0106
1.32
0.58
0.914
0.55
0.6
0.44
0.7
4.27
0.0751
0.0171
0.0237


2583054
0.66
0.0032
1.33
0.64
0.5397
0.7
0.6
0.5
0.78
6.28
0.0012
0.0021
0.0029


2583056
0.67
0.0016
1.44
0.69
0.1164
0.7
0.68
0.56
0.8
4.41
0
0.0026
0.0027


2583249
0.63
0.0164
1.45
0.64
0.5397
0.55
0.68
0.5
0.73
4.69
0.0068
0.0125
0.0171


2583609
0.61
0.0382
1.33
0.6
0.7956
0.6
0.61
0.47
0.72
5.26
0.0229
0.0228
0.0302


2584845
0.68
0.0007
1.41
0.65
0.3949
0.66
0.65
0.52
0.77
6.12
0.0005
0.0006
0.0012


2588838
0.65
0.0058
1.3
0.67
0.2627
0.55
0.73
0.54
0.74
5.31
0.0003
0.0105
0.0173


2590750
0.64
0.0093
1.46
0.67
0.2627
0.62
0.7
0.54
0.76
5.42
0.0002
0.0062
0.0111


2590802
0.65
0.0055
1.6
0.67
0.2627
0.62
0.7
0.54
0.76
6.66
0.0002
0.002
0.0036


2591635
0.61
0.0472
1.31
0.6
0.8429
0.66
0.56
0.46
0.74
6.53
0.0108
0.0229
0.0396


2591638
0.64
0.0097
1.44
0.66
0.3262
0.64
0.67
0.53
0.76
6.56
0.0002
0.0034
0.0094


2593447
0.65
0.0044
1.37
0.63
0.611
0.55
0.67
0.49
0.72
4.58
0.0108
0.0066
0.0118


2593692
0.65
0.0052
1.56
0.62
0.6786
0.57
0.65
0.48
0.73
5.33
0.012
0.0033
0.0041


2593714
0.62
0.0236
1.31
0.61
0.7405
0.47
0.7
0.47
0.7
5.08
0.0502
0.0143
0.0259


2593758
0.61
0.0323
1.63
0.62
0.6786
0.66
0.6
0.48
0.75
4.96
0.0031
0.0086
0.0156


2594506
0.65
0.006
1.4
0.64
0.5397
0.57
0.67
0.5
0.73
4.18
0.007
0.0149
0.0127


2596691
0.65
0.0043
1.3
0.63
0.611
0.72
0.57
0.49
0.78
4.81
0.0017
0.007
0.0057


2597013
0.65
0.0043
1.32
0.59
0.8822
0.64
0.56
0.45
0.73
4.47
0.0208
0.0019
0.0039


2598267
0.64
0.0084
1.35
0.64
0.5397
0.68
0.61
0.5
0.77
6.26
0.0015
0.0032
0.0099


2598289
0.67
0.0014
1.46
0.67
0.2627
0.6
0.71
0.54
0.75
5.61
0.001
0.0008
0.0029


2598781
0.66
0.0031
1.3
0.64
0.4669
0.72
0.6
0.51
0.79
8.69
0.0005
0.0021
0.0028


2599342
0.66
0.0024
1.5
0.66
0.3262
0.57
0.71
0.53
0.74
5.64
0.0018
0.0033
0.0041


2599903
0.63
0.0155
1.47
0.63
0.611
0.57
0.66
0.49
0.73
4.36
0.0141
0.0094
0.0095


2606647
0.63
0.0151
1.36
0.6
0.8429
0.66
0.56
0.46
0.74
6.61
0.0171
0.0096
0.0108


2607152
0.64
0.0066
1.31
0.65
0.3949
0.66
0.65
0.52
0.77
6.02
0.0008
0.0046
0.0075


2607374
0.64
0.0086
1.37
0.62
0.6786
0.45
0.72
0.48
0.69
5.08
0.0487
0.0072
0.0108


2609635
0.65
0.0051
1.34
0.64
0.5397
0.68
0.61
0.5
0.77
4.55
0.0012
0.0052
0.0063


2609657
0.68
0.001
1.41
0.69
0.1164
0.64
0.72
0.57
0.78
5.09
0.0001
0.0006
0.0013


2609668
0.64
0.0074
1.29
0.63
0.611
0.68
0.6
0.49
0.77
5.61
0.0015
0.0077
0.0179


2610353
0.63
0.0177
1.37
0.6
0.8429
0.66
0.56
0.46
0.74
5.45
0.012
0.0113
0.0179


2611083
0.64
0.0093
1.27
0.64
0.4669
0.38
0.79
0.51
0.69
5.77
0.0163
0.0037
0.0079


2614100
0.65
0.0041
1.36
0.67
0.206
0.57
0.73
0.55
0.75
5.7
0.0003
0.0075
0.0056


2614135
0.64
0.0101
1.27
0.61
0.7405
0.51
0.67
0.47
0.71
5.24
0.0455
0.0078
0.0121


2614137
0.63
0.0118
1.44
0.65
0.3949
0.64
0.66
0.52
0.76
5.64
0.0012
0.0057
0.0055


2615656
0.62
0.03
1.25
0.58
0.914
0.51
0.62
0.44
0.69
5.34
0.1141
0.0366
0.0484


2616071
0.62
0.0194
1.47
0.64
0.4669
0.51
0.72
0.51
0.72
4.56
0.0043
0.0077
0.0167


2616248
0.65
0.0055
1.36
0.64
0.5397
0.53
0.7
0.5
0.72
5.09
0.0112
0.0054
0.0055


2617578
0.64
0.007
1.41
0.58
0.914
0.74
0.49
0.45
0.77
5.27
0.0116
0.0066
0.0071


2618656
0.67
0.0013
1.49
0.61
0.7405
0.7
0.56
0.48
0.77
5.76
0.0049
0.0015
0.0014


2619365
0.64
0.0078
1.38
0.64
0.4669
0.57
0.68
0.51
0.74
4.8
0.003
0.011
0.0141


2625632
0.62
0.0242
1.2
0.58
0.914
0.66
0.54
0.45
0.73
3.76
0.0335
0.0467
0.0408


2625643
0.7
0.0002
1.35
0.66
0.3262
0.53
0.73
0.53
0.73
6.21
0.0026
0.0005
0.0006


2625893
0.67
0.0017
1.41
0.63
0.611
0.45
0.73
0.49
0.7
3.81
0.0318
0.0037
0.0042


2627951
0.7
0.0002
1.37
0.69
0.1164
0.66
0.71
0.56
0.78
3.94
0
0.0005
0.0009


2633534
0.67
0.0015
1.3
0.63
0.611
0.45
0.73
0.49
0.7
4.58
0.0355
0.0017
0.0024


2633651
0.64
0.0069
1.4
0.66
0.3262
0.62
0.68
0.53
0.76
5.81
0.0004
0.0033
0.0053


2638377
0.65
0.0046
1.28
0.62
0.6786
0.49
0.7
0.48
0.7
4.39
0.0182
0.0047
0.0075


2638451
0.64
0.073
1.29
0.64
0.5397
0.64
0.63
0.5
0.75
7.12
0.0018
0.0036
0.0057


2638452
0.64
0.0101
1.37
0.6
0.7956
0.72
0.54
0.47
0.77
6.85
0.0049
0.0069
0.0076


2641575
0.63
0.011
1.34
0.62
0.6786
0.57
0.65
0.48
0.73
5.27
0.0126
0.0137
0.0133


2643579
0.62
0.0194
1.29
0.65
0.3949
0.55
0.71
0.52
0.73
4.93
0.001
0.0136
0.0179


2645294
0.67
0.0017
1.63
0.68
0.1571
0.6
0.73
0.56
0.76
5.95
0.0001
0.0006
0.0011


2646066
0.64
0.01
1.3
0.66
0.3262
0.7
0.63
0.52
0.79
5.12
0.0003
0.0124
0.0148


2646085
0.66
0.0026
1.54
0.62
0.6786
0.7
0.57
0.49
0.77
5.23
0.0029
0.0013
0.0022


2647361
0.64
0.007
1.46
0.66
0.3262
0.62
0.68
0.53
0.76
5.11
0.0005
0.0077
0.0102


2647678
0.65
0.0044
1.31
0.67
0.2627
0.55
0.73
0.54
0.74
4.46
0.0004
0.0031
0.0062


2647775
0.66
0.0028
1.39
0.66
0.3262
0.57
0.71
0.53
0.74
5.37
0.0006
0.0014
0.003


2647779
0.64
0.0107
1.32
0.6
0.7956
0.57
0.62
0.47
0.72
4.28
0.0257
0.0028
0.0081


2648202
0.62
0.0213
1.25
0.65
0.3949
0.47
0.76
0.52
0.71
5.46
0.0116
0.0259
0.0292


2651521
0.68
0.0006
1.35
0.7
0.0837
0.64
0.73
0.58
0.78
4.48
0
0.0003
0.0011


2652021
0.67
0.0016
1.51
0.67
0.2627
0.57
0.72
0.54
0.75
5.14
0.0005
0.001
0.0023


2654335
0.68
0.0007
1.38
0.64
0.4669
0.47
0.74
0.51
0.71
5.6
0.0075
0.0009
1.0011


2654874
0.67
0.001
1.34
0.68
0.1571
0.64
0.71
0.56
0.77
5.87
0.0001
0.0011
0.0014


2654878
0.67
0.0017
1.29
0.66
0.3262
0.45
0.78
0.54
0.71
4.18
0.0021
0.0006
0.0026


2655475
0.68
0.0008
1.39
0.67
0.206
0.57
0.73
0.55
0.75
5.38
0.0002
0.0007
0.0011


2655509
0.66
0.0023
1.3
0.63
0.611
0.7
0.59
0.49
0.77
8.77
0.0016
0.0012
0.0021


2655678
0.64
0.0097
1.31
0.62
0.6786
0.62
0.62
0.48
0.74
5.74
0.0036
0.004
0.01


2656791
0.66
0.0024
1.31
0.62
0.6786
0.72
0.56
0.49
0.78
6.96
0.0024
0.0025
0.0033


2658354
0.66
0.0032
1.23
0.67
0.2627
0.6
0.71
0.54
0.75
5.34
0.001
0.0033
0.0037


2658632
0.72
0
1.39
0.69
0.1164
0.64
0.72
0.57
0.78
5.01
0
0
0.0001


2663553
0.61
0.043
1.32
0.64
0.4669
0.47
0.74
0.51
0.71
4.81
0.0087
0.011
0.0206


2666503
0.61
0.0456
1.39
0.67
0.2627
0.57
0.72
0.54
0.75
6.15
0.0005
0.0167
0.027


2666519
0.64
0.0096
1.2
0.64
0.4669
0.45
0.76
0.51
0.7
6.7
0.0174
0.0067
0.0104


2666524
0.66
0.0031
1.47
0.63
0.611
0.53
0.68
0.49
0.72
4.57
0.0072
0.0013
0.0035


2669316
0.62
0.0271
1.55
0.64
0.5397
0.53
0.7
0.5
0.72
4.86
0.0115
0.0177
0.0154


2669571
0.67
0.0014
1.41
0.66
0.3262
0.64
0.67
0.53
0.76
5.11
0.001
0.0034
0.0029


2670438
0.68
0.0008
0.71
0.36
1
0.36
0.37
0.25
0.5
4.35
0.0086
0.0035
0.0013


2672775
0.63
0.0121
1.5
0.59
0.8822
0.6
0.59
0.45
0.72
4.97
0.0351
0.007
0.0121


2674243
0.63
0.0113
1.4
0.6
0.7956
0.7
0.55
0.47
0.76
5.96
0.0056
0.011
0.0127


2675269
0.61
0.0339
1.2
0.6
0.8429
0.45
0.68
0.45
0.68
4.13
0.1106
0.0587
0.0831


2675802
0.61
0.0315
1.34
0.63
0.611
0.55
0.67
0.49
0.72
5.9
0.0157
0.0202
0.0209


2676931
0.65
0.0051
1.37
0.64
0.5397
0.62
0.65
0.5
0.75
6.46
0.0021
0.0049
0.0057


2677655
0.63
0.0141
1.33
0.64
0.4669
0.64
0.65
0.51
0.76
5.91
0.002
0.0134
0.0126


2677695
0.69
0.0004
1.32
0.64
0.5397
0.49
0.72
0.5
0.71
4.41
0.0088
0.0003
0.0009


2680511
0.65
0.0036
1.33
0.69
0.1164
0.64
0.72
0.57
0.78
3.39
0
0.0021
0.0034


2682663
0.66
0.0024
1.34
0.68
0.1571
0.53
0.77
0.57
0.74
6.54
0.0011
0.0023
0.0036


2685954
0.62
0.0252
1.26
0.61
0.7405
0.38
0.74
0.46
0.68
3.8
0.072
0.0329
0.0816


2691756
0.67
0.001
1.31
0.64
0.4669
0.64
0.65
0.51
0.76
4.83
0.0011
0.0014
0.0018


2692111
0.67
0.0012
1.57
0.69
0.1164
0.66
0.71
0.56
0.78
5.09
0.0001
0.0022
0.0018


2694407
0.69
0.0005
1.32
0.64
0.5397
0.6
0.66
0.5
0.74
3.99
0.0032
0.0006
0.0021


2694648
0.64
0.0101
1.44
0.6
0.8429
0.62
0.59
0.46
0.73
5.7
0.024
0.0089
0.0113


2694649
0.65
0.004
1.45
0.61
0.7405
0.64
0.6
0.48
0.74
5.44
0.0085
0.0042
0.0064


2695413
0.66
0.0031
1.39
0.66
0.3262
0.53
0.73
0.53
0.73
6.08
0.001
0.0014
0.0026


2700507
0.63
0.0159
1.27
0.6
0.7956
0.43
0.71
0.45
0.68
5.32
0.0742
0.0166
0.0338


2700829
0.66
0.0023
1.39
0.61
0.7405
0.47
0.7
0.47
0.7
5.51
0.0397
0.003
0.0055


2701289
0.65
0.0045
1.31
0.65
0.3949
0.64
0.66
0.52
0.76
5.43
0.0009
0.0062
0.0058


2702329
0.61
0.0303
1.33
0.63
0.611
0.6
0.65
0.49
0.74
4.59
0.0064
0.0177
0.0298


2703240
0.65
0.0054
1.52
0.64
0.4669
0.47
0.74
0.51
0.71
4.59
0.0064
0.0037
0.0075


2704511
0.66
0.0023
1.23
0.67
0.206
0.55
0.74
0.55
0.74
3.46
0.0008
0.0006
0.0009


2704898
0.66
0.0026
1.37
0.62
0.6786
0.51
0.68
0.48
0.71
4.15
0.0193
0.0013
0.0029


2704935
0.64
0.0094
1.29
0.65
0.3949
0.66
0.65
0.52
0.77
7.15
0.0005
0.0039
0.0085


2705001
0.69
0.0004
1.54
0.67
0.206
0.64
0.7
0.55
0.77
6.2
0.0001
0.0001
0.0003


2706322
0.65
0.0049
1.36
0.66
0.3262
0.55
0.72
0.53
0.74
5.24
0.0006
0.0025
0.005


2706324
0.63
0.0132
1.36
0.66
0.3262
0.64
0.67
0.53
0.76
6.14
0.0005
0.0064
0.0107


2707780
0.66
0.0031
1.38
0.63
0.611
0.57
0.66
0.49
0.73
5.34
0.0092
0.0022
0.0048


2708798
0.67
0.0011
1.36
0.64
0.4669
0.7
0.61
0.51
0.78
7.58
0.0007
0.0012
0.0017


2709489
0.61
0.0382
1.25
0.64
0.5397
0.53
0.7
0.5
0.72
5.65
0.0044
0.0378
0.0499


2710214
0.65
0.0041
1.31
0.62
0.6786
0.45
0.72
0.48
0.69
4.56
0.0535
0.0046
0.0057


2710217
0.71
0.0001
1.4
0.69
0.1164
0.55
0.77
0.58
0.75
4.85
0.0002
0.0002
0.0003


2711689
0.63
0.0173
1.32
0.61
0.7405
0.57
0.63
0.47
0.72
4.1
0.0134
0.0191
0.0379


2712424
0.65
0.0052
1.44
0.64
0.4669
0.68
0.62
0.51
0.77
6.13
0.0013
0.0031
0.0037


2713075
0.64
0.0104
1.46
0.6
0.8429
0.6
0.6
0.46
0.72
6.49
0.0219
0.0063
0.0084


2713262
0.66
0.0024
1.34
0.67
0.206
0.62
0.71
0.55
0.76
4.38
0.0001
0.0037
0.001


2713269
0.68
0.0005
1.35
0.64
0.4669
0.55
0.7
0.51
0.73
5.43
0.0032
0.0005
0.0009


2714106
0.64
0.007
1.29
0.58
0.914
0.34
0.72
0.41
0.66
4.95
0.4954
0.02
0.0209


2715470
0.63
0.0173
1.41
0.59
0.8822
0.72
0.51
0.46
0.76
5.36
0.0088
0.0119
0.0146


2715717
0.65
0.0038
1.77
0.6
0.7956
0.68
0.56
0.47
0.75
5.55
0.0062
0.0036
0.0045


2720693
0.66
0.0031
1.38
0.64
0.4669
0.47
0.74
0.51
0.71
4.42
0.0093
0.0129
0.0129


2724050
0.67
0.001
1.36
0.66
0.3262
0.57
0.71
0.53
0.74
5.65
0.0004
0.0004
0.0013


2724565
0.67
0.0017
1.35
0.64
0.5397
0.7
0.6
0.5
0.8
8.11
0.0011
0.0004
0.001


2726514
0.65
0.0051
1.34
0.62
0.6786
0.53
0.67
0.48
0.71
4.49
0.0198
0.0088
0.01


2727970
0.64
0.0101
1.48
0.63
0.611
0.64
0.62
0.49
0.75
5.17
0.004
0.0077
0.0084


2730701
0.64
0.0096
1.31
0.6
0.7956
0.45
0.7
0.46
0.69
4.41
0.0935
0.0163
0.0202


2731872
0.67
0.0015
1.49
0.65
0.3949
0.45
0.77
0.53
0.71
4.78
0.0066
0.0033
0.0041


2732403
0.63
0.0115
1.38
0.62
0.6786
0.64
0.61
0.48
0.75
4.77
0.0058
0.0054
0.0135


2735017
0.63
0.0118
1.36
0.63
0.611
0.43
0.74
0.49
0.69
4.91
0.0495
0.0377
0.0262


2736295
0.63
0.0153
1.41
0.64
0.5397
0.53
0.7
0.5
0.72
4.58
0.0078
0.011
0.0193


2738963
0.65
0.0052
1.4
0.64
0.4669
0.62
0.66
0.51
0.75
5.13
0.0033
0.0048
0.0064


2743194
0.68
0.0006
1.3
0.64
0.4669
0.68
0.62
0.51
0.77
6.67
0.0008
0.0001
0.0005


2744632
0.58
0.1112
1.25
0.62
0.6786
0.47
0.71
0.48
0.7
4.28
0.042
0.1095
0.147


2745687
0.65
0.0041
1.32
0.64
0.5397
0.57
0.67
0.5
0.73
5.03
0.0056
0.0086
0.0125


2754300
0.65
0.0045
1.29
0.64
0.4669
0.47
0.74
0.51
0.71
4.77
0.0171
0.0106
0.0088


2757037
0.66
0.003
1.35
0.61
0.7405
0.74
0.54
0.48
0.79
7.13
0.0017
0.005
0.0068


2763813
0.62
0.0282
1.34
0.61
0.7405
0.47
0.7
0.47
0.7
3.84
0.0581
0.0175
0.0303


2766634
0.66
0.0019
1.33
0.65
0.3949
0.7
0.62
0.52
0.78
4.74
0.0006
0.0022
0.0042


2770195
0.63
0.0121
1.29
0.64
0.5397
0.4
0.77
0.5
0.69
3.7
0.0313
0.0114
0.0156


2770473
0.66
0.0025
1.4
0.66
0.3262
0.64
0.67
0.53
0.76
6.63
0.0006
0.002
0.0023


2771759
0.68
0.0006
1.43
0.69
0.1164
0.55
0.77
0.58
0.75
5.36
0.0002
0.0003
0.0004


2773129
0.62
0.0221
1.32
0.59
0.8822
0.64
0.56
0.45
0.73
4.12
0.0343
0.0262
0.0211


2774054
0.64
0.0078
1.38
0.64
0.5397
0.43
0.76
0.5
0.7
4.42
0.037
0.0161
0.0109


2775592
0.6
0.0547
1.23
0.58
0.914
0.6
0.57
0.44
0.71
4.96
0.0661
0.023
0.0372


2775758
0.65
0.0055
1.41
0.61
0.7405
0.72
0.55
0.48
0.78
6.87
0.0025
0.0071
0.0101


2776094
0.64
0.0077
1.38
0.66
0.3262
0.62
0.68
0.53
0.76
4.13
0.0016
0.0434
0.0197


2777492
0.61
0.0327
1.31
0.64
0.5397
0.43
0.76
0.5
0.7
4
0.0178
0.009
0.0225


2779488
0.67
0.0011
1.39
0.67
0.206
0.64
0.7
0.55
0.77
6.72
0.0001
0.0004
0.001


2779639
0.66
0.0029
1.48
0.62
0.6786
0.64
0.61
0.48
0.75
5.71
0.0043
0.0028
0.003


2779995
0.63
0.0149
1.34
0.63
0.611
0.55
0.67
0.49
0.72
5.44
0.0121
0.0076
0.0095


2780545
0.67
0.0011
1.44
0.67
0.206
0.62
0.71
0.55
0.76
4.57
0.0002
0.0012
0.0022


2783475
0.67
0.0016
1.39
0.64
0.4669
0.72
0.6
0.51
0.79
6.7
0.0005
0.0013
0.0015


2789554
0.62
0.0227
1.17
0.61
0.7405
0.49
0.68
0.47
0.7
5.7
0.0366
0.0162
0.0293


2790573
0.63
0.0128
1.32
0.63
0.611
0.74
0.56
0.49
0.79
6.09
0.0012
0.0137
0.0111


2797449
0.65
0.0042
1.33
0.63
0.611
0.53
0.68
0.49
0.72
6.3
0.0131
0.005
0.0068


2801338
0.62
0.02
1.47
0.64
0.5397
0.51
0.71
0.5
0.72
4.65
0.0066
0.0168
0.0265


2801556
0.65
0.0044
1.34
0.6
0.7956
0.68
0.56
0.47
0.75
6.7
0.0063
0.0023
0.0036


2801679
0.66
0.0029
1.33
0.64
0.5397
0.66
0.62
0.5
0.76
6.36
0.002
0.0013
0.0026


2802506
0.69
0.0003
1.33
0.64
0.4669
0.74
0.59
0.51
0.8
4.36
0.0002
0.0003
0.0013


2805739
0.61
0.0356
1.21
0.6
0.7956
0.47
0.68
0.46
0.69
4.4
0.0679
0.0264
0.0409


2806859
0.68
0.0007
1.29
0.67
0.2627
0.64
0.68
0.54
0.77
6.08
0.0003
0.0003
0.0006


2806912
0.64
0.0109
1.34
0.63
0.611
0.57
0.66
0.49
0.73
5.86
0.0079
0.0078
0.012


2807658
0.69
0.0004
1.34
0.67
0.2627
0.57
0.72
0.54
0.75
5.22
0.0003
0.0002
0.0006


2809146
0.61
0.0303
1.43
0.62
0.6786
0.64
0.61
0.48
0.75
5.49
0.0056
0.0171
0.0207


2810487
0.61
0.0477
1.25
0.61
0.7405
0.47
0.7
0.47
0.7
4.2
0.0389
0.0321
0.0581


2812307
0.65
0.0046
1.46
0.64
0.5397
0.53
0.7
0.5
0.72
4.52
0.0133
0.015
0.0115


2812500
0.64
0.0078
1.6
0.64
0.4669
0.53
0.71
0.51
0.73
3.58
0.0058
0.0023
0.0051


2812573
0.64
0.0092
1.28
0.62
0.6786
0.68
0.59
0.48
0.76
7
0.0034
0.0044
0.0073


2817404
0.67
0.0019
1.66
0.67
0.206
0.57
0.73
0.55
0.75
4.65
0.0007
0.0042
0.0046


2817457
0.66
0.0031
1.66
0.64
0.5397
0.57
0.67
0.5
0.73
4.85
0.0067
0.0034
0.0035


2818271
0.63
0.0118
1.25
0.67
0.206
0.64
0.7
0.55
0.77
6.67
0.0001
0.0085
0.017


2818964
0.67
0.0014
1.4
0.63
0.611
0.72
0.57
0.49
0.78
6.77
0.0011
0.0018
0.002


2822274
0.61
0.0315
1.7
0.64
0.5397
0.6
0.66
0.5
0.74
5.01
0.0025
0.0132
0.0191


2823066
0.68
0.001
1.36
0.67
0.2627
0.43
0.8
0.56
0.71
4.03
0.003
0.0041
0.0047


2823854
0.63
0.0135
1.44
0.59
0.8822
0.64
0.56
0.45
0.73
6.26
0.0217
0.0078
0.0118


2824899
0.62
0.0265
1.26
0.63
0.611
0.49
0.71
0.49
0.71
4.63
0.0104
0.0181
0.0374


2828112
0.67
0.0015
1.61
0.66
0.3262
0.72
0.62
0.52
0.8
5.64
0.0001
0.001
0.0014


2828637
0.64
0.0103
1.26
0.63
0.611
0.53
0.68
0.49
0.72
5.51
0.0074
0.0022
0.0082


2828642
0.65
0.0056
1.52
0.62
0.6786
0.57
0.65
0.48
0.73
4.5
0.0113
0.0054
0.0087


2829255
0.65
0.0036
1.34
0.63
0.611
0.66
0.61
0.49
0.76
4.35
0.0048
0.0043
0.0056


2829555
0.57
0.1609
1.24
0.63
0.611
0.49
0.71
0.49
0.71
5.03
0.0191
0.0538
0.0889


2829679
0.65
0.006
1.33
0.64
0.5397
0.55
0.68
0.5
0.73
6.03
0.0078
0.0027
0.0045


2831231
0.64
0.0082
1.36
0.64
0.5397
0.57
0.67
0.5
0.73
6.17
0.0035
0.0071
0.0109


2831557
0.64
0.0076
1.4
0.6
0.7956
0.6
0.61
0.47
0.72
6.57
0.0219
0.0039
0.0047


2836687
0.63
0.0149
1.32
0.57
0.9388
0.66
0.52
0.44
0.73
4.88
0.0462
0.0081
0.0117


2840638
0.64
0.0094
1.31
0.61
0.7405
0.6
0.62
0.47
0.73
4.59
0.0129
0.0058
0.012


2843280
0.61
0.0373
1.33
0.57
0.9388
0.55
0.59
0.43
0.7
6.04
0.0824
0.028
0.0329


2844248
0.62
0.0187
1.52
0.64
0.4669
0.66
0.63
0.51
0.76
6.16
0.0012
0.0078
0.0093


2844250
0.64
0.0079
1.45
0.6
0.7956
0.66
0.57
0.47
0.75
5.75
0.0115
0.0063
0.005


2848258
0.65
0.0039
1.35
0.6
0.8429
0.47
0.67
0.45
0.69
4.95
0.0619
0.003
0.0062


2848472
0.62
0.0278
1.67
0.64
0.5397
0.57
0.67
0.5
0.73
6.16
0.003
0.0097
0.014


2851973
0.66
0.0027
1.32
0.64
0.4669
0.62
0.66
0.51
0.75
4.77
0.0017
0.0024
0.0039


2854808
0.65
0.0036
1.65
0.64
0.5397
0.68
0.61
0.5
0.77
5.98
0.0013
0.0017
0.0029


2854809
0.67
0.0019
1.29
0.66
0.3262
0.66
0.66
0.53
0.77
8.1
0.0002
0.0007
0.0016


2855289
0.65
0.0043
1.55
0.64
0.4669
0.62
0.66
0.51
0.75
5.36
0.0037
0.0058
0.0065


2855291
0.66
0.0024
1.49
0.66
0.3262
0.6
0.7
0.53
0.75
4.63
0.0016
0.0023
0.0029


2855292
0.64
0.0083
1.33
0.67
0.2627
0.64
0.68
0.54
0.77
5.55
0.0004
0.0029
0.0047


2857172
0.65
0.0054
1.58
0.64
0.4669
0.64
0.65
0.51
0.76
4.95
0.001
0.0029
0.0057


2862162
0.63
0.0166
1.26
0.64
0.4669
0.62
0.66
0.51
0.75
4.52
0.0014
0.0174
0.0248


2862377
0.64
0.0101
1.32
0.66
0.3262
0.7
0.63
0.52
0.79
7.96
0.0003
0.0059
0.007


2865063
0.64
0.0065
1.48
0.64
0.5397
0.7
0.6
0.5
0.78
6.19
0.001
0.0039
0.0059


2868141
0.64
0.0107
1.32
0.64
0.4669
0.62
0.66
0.51
0.75
5.73
0.0014
0.0056
0.0098


2877518
0.62
0.0245
1.31
0.64
0.5397
0.57
0.67
0.5
0.73
5.76
0.0045
0.0137
0.0243


2878261
0.65
0.004
1.3
0.62
0.6786
0.68
0.59
0.48
0.76
5.74
0.0012
0.0014
0.004


2882121
0.65
0.0039
1.36
0.64
0.5397
0.66
0.62
0.5
0.76
7.59
0.0011
0.0017
0.0038


2883344
0.61
0.0351
1.26
0.58
0.914
0.47
0.65
0.43
0.68
4.55
0.2339
0.0421
0.0391


2893822
0.61
0.0451
1.22
0.6
0.8429
0.36
0.73
0.44
0.67
5.07
0.175
0.0408
0.0892


2893942
0.63
0.0173
1.37
0.63
0.611
0.64
0.62
0.49
0.75
6.32
0.0041
0.017
0.0172


2896978
0.66
0.0035
1.37
0.64
0.5397
0.49
0.72
0.5
0.71
4.84
0.0241
0.0057
0.0038


2898531
0.63
0.018
1.32
0.53
0.9955
0.6
0.49
0.4
0.68
5.35
0.2482
0.009
0.0177


2902010
0.65
0.0062
1.28
0.65
0.3949
0.6
0.68
0.52
0.75
6.35
0.0015
0.0032
0.0052


2902011
0.63
0.018
1.49
0.63
0.611
0.68
0.6
0.49
0.77
5.59
0.0034
0.0066
0.0099


2905137
0.67
0.0013
1.39
0.69
0.1164
0.55
0.77
0.58
0.75
4.9
0.0001
0.0001
0.0007


2906968
0.64
0.0077
1.4
0.64
0.5397
0.66
0.62
0.5
0.76
5.69
0.0025
0.0046
0.0059


2908048
0.61
0.0378
1.33
0.57
0.9577
0.62
0.54
0.43
0.71
4.61
0.0579
0.0322
0.0492


2909471
0.63
0.0121
1.41
0.61
0.7405
0.6
0.62
0.47
0.73
5
0.0179
0.0165
0.0182


2910489
0.65
0.0062
1.26
0.6
0.8429
0.7
0.54
0.46
0.76
5.05
0.0087
0.0081
0.0108


2914002
0.65
0.0063
1.33
0.64
0.4669
0.49
0.73
0.51
0.71
4.56
0.0061
0.0033
0.005


2914107
0.71
0.0001
1.28
0.68
0.1571
0.74
0.65
0.55
0.82
4.16
0
0.0011
0.0018


2916383
0.62
0.0221
1.24
0.58
0.914
0.64
0.55
0.45
0.73
5.73
0.0307
0.018
0.0257


2916976
0.68
0.0007
1.44
0.68
0.1571
0.57
0.74
0.56
0.75
4.23
0
0.0008
0.0013


2918543
0.64
0.0075
1.33
0.64
0.5397
0.66
0.62
0.5
0.76
4.64
0.002
0.0096
0.0077


2918547
0.66
0.0021
1.46
0.63
0.611
0.62
0.63
0.49
0.74
6.45
0.0042
0.002
0.0028


2922232
0.63
0.0137
1.27
0.62
0.6786
0.45
0.72
0.48
0.69
5.15
0.0405
0.024
0.0242


2922235
0.66
0.003
1.4
0.64
0.4669
0.51
0.77
0.51
0.72
4.63
0.008
0.0105
0.0083


2926222
0.67
0.0012
1.46
0.65
0.3949
0.7
0.62
0.52
0.78
7.58
0.0005
0.001
0.0012


2929946
0.65
0.0048
1.29
0.64
0.4669
0.53
0.71
0.51
0.73
5.67
0.003
0.0044
0.0065


3930652
0.65
0.0052
1.44
0.63
0.611
0.62
0.63
0.49
0.74
6.5
0.005
0.0045
0.0055


2932399
0.6
0.0612
1.24
0.62
0.6786
0.51
0.68
0.48
0.71
4.8
0.0367
0.0637
0.0539


2932428
0.65
0.0059
1.52
0.65
0.3949
0.53
0.72
0.52
0.73
4.44
0.0035
0.0056
0.007


2933660
0.66
0.002
1.27
0.67
0.206
0.7
0.66
0.54
0.79
5.57
0.0001
0.002
0.004


2936963
0.64
0.01
1.37
0.6
0.7956
0.4
0.72
0.45
0.68
3.97
0.1336
0.0447
0.057


2940827
0.65
0.0039
1.41
0.63
0.611
0.6
0.65
0.49
0.74
5.39
0.0044
0.0069
0.0076


2942512
0.62
0.0268
1.23
0.6
0.8429
0.49
0.66
0.45
0.69
5.96
0.056
0.0433
0.045


2944070
0.65
0.0059
1.47
0.63
0.611
0.6
0.65
0.49
0.74
5.68
0.0043
0.006
0.0075


2944963
0.68
0.0006
1.3
0.65
0.3949
0.62
0.67
0.52
0.75
7.11
0.0013
0.0004
0.0007


2946479
0.64
0.0071
1.4
0.64
0.4669
0.53
0.71
0.51
0.73
4.29
0.0076
0.0283
0.0289


2947592
0.66
0.0024
1.46
0.64
0.4669
0.6
0.67
0.51
0.74
4.7
0.0015
0.0005
0.0018


2948592
0.66
0.0031
1.33
0.6
0.8429
0.6
0.6
0.46
0.72
5.71
0.0251
0.0031
0.0039


2948596
0.65
0.0036
1.32
0.61
0.7405
0.68
0.57
0.48
0.76
4.3
0.0067
0.0052
0.0061


2949053
0.63
0.0173
1.41
0.63
0.611
0.6
0.65
0.49
0.74
4.92
0.0032
0.0108
0.0184


2949061
0.58
0.1101
1.27
0.6
0.8429
0.49
0.66
0.45
0.69
4.84
0.0833
0.0877
0.1248


2951060
0.63
0.0123
1.28
0.61
0.7405
0.7
0.56
0.48
0.77
6.58
0.0039
0.0073
0.0069


2956077
0.65
0.0046
1.3
0.64
0.4669
0.49
0.73
0.51
0.71
5.43
0.0069
0.0034
0.0085


2958402
0.65
0.0056
1.32
0.66
0.3262
0.55
0.72
0.53
0.74
5.07
0.0007
0.0143
0.0251


2961302
0.63
0.0149
1.4
0.62
0.6786
0.72
0.56
0.49
0.78
5.63
0.0018
0.0082
0.0107


2966293
0.63
0.0157
1.37
0.64
0.5397
0.55
0.68
0.5
0.73
4.28
0.0062
0.0149
0.0183


2966378
0.62
0.021
1.31
0.63
0.611
0.66
0.61
0.49
0.76
5.86
0.0035
0.0172
0.0181


2967164
0.63
0.0115
1.26
0.63
0.611
0.57
0.66
0.49
0.73
3.89
0.0053
0.0101
0.022


2967323
0.62
0.0258
1.43
0.64
0.4669
0.62
0.66
0.51
0.75
4.4
0.0038
0.0082
0.0127


2968257
0.61
0.0401
1.23
0.6
0.8429
0.57
0.61
0.46
0.71
5.01
0.0256
0.0424
0.0552


2968653
0.64
0.0103
1.37
0.63
0.611
0.57
0.66
0.49
0.73
5.14
0.0066
0.0094
0.0116


2974195
0.64
0.0094
1.25
0.6
0.7956
0.77
0.51
0.47
0.79
6.75
0.002
0.0091
0.0118


2974332
0.65
0.0041
1.67
0.64
0.5397
0.66
0.62
0.5
0.76
4.95
0.0036
0.0065
0.0052


2975686
0.67
0.0019
1.34
0.66
0.3262
0.68
0.65
0.52
0.78
5.93
0.0006
0.0017
0.0014


2975709
0.63
0.0166
1.27
0.62
0.6786
0.4
0.74
0.48
0.69
5.29
0.0671
0.0242
0.0287


2976368
0.63
0.0162
1.35
0.64
0.5397
0.47
0.73
0.5
0.71
5.49
0.012
0.0214
0.0372


2977521
0.64
0.0068
1.31
0.58
0.914
0.74
0.49
0.45
0.77
6.32
0.0093
0.0064
0.0074


2981918
0.63
0.0116
1.39
0.62
0.6786
0.51
0.68
0.48
0.71
5.26
0.0269
0.0118
0.0142


2982323
0.64
0.0098
1.39
0.63
0.611
0.68
0.6
0.49
0.77
6.6
0.0014
0.0067
0.008


2982385
0.68
0.001
1.48
0.63
0.611
0.6
0.65
0.49
0.74
4.49
0.0141
0.0011
0.0013


2984576
0.61
0.0303
1.39
0.61
0.7405
0.53
0.66
0.47
0.71
4.1
0.0315
0.0123
0.0164


2985813
0.64
0.0071
1.51
0.64
0.4669
0.55
0.7
0.51
0.73
4.14
0.0044
0.0268
0.0347


2985965
0.68
0.0006
1.28
0.66
0.3262
0.6
0.7
0.53
0.75
6.32
0.0007
0.0006
0.0007


2988895
0.66
0.0028
1.26
0.66
0.3262
0.68
0.65
0.52
0.78
4.25
0.0004
0.0048
0.0074


2988896
0.65
0.0039
1.31
0.58
0.914
0.74
0.49
0.45
0.77
7.44
0.0123
0.0049
0.005


2989720
0.66
0.0031
1.31
0.61
0.7405
0.47
0.7
0.47
0.7
5.09
0.0541
0.0021
0.0029


2991248
0.61
0.0307
0.26
0.62
0.6786
0.64
0.61
0.48
0.75
6.93
0.0056
0.0169
0.0238


2991263
0.68
0.0007
1.32
0.66
0.3262
0.68
0.65
0.52
0.78
6.56
0.0002
0.001
0.0017


2991264
0.65
0.0041
1.52
0.67
0.206
0.64
0.7
0.55
0.77
5.46
0.0001
0.0029
0.0046


2903622
0.64
0.007
1.32
0.6
0.8429
0.66
0.56
0.46
0.74
4.94
0.0201
0.0064
0.008


2993644
0.65
0.0054
1.32
0.6
0.8429
0.68
0.55
0.46
0.75
4.71
0.009
0.0037
0.0064


2993659
0.68
0.0007
1.48
0.67
0.2627
0.64
0.68
0.54
0.77
5.68
0.0004
0.0006
0.0009


2994371
0.62
0.0255
1.24
0.64
0.5397
0.49
0.72
0.5
0.71
3.95
0.0273
0.0382
0.0314


2995598
0.62
0.0242
1.25
0.6
0.8429
0.51
0.65
0.45
0.7
5.45
0.1016
0.0497
0.0309


2997143
0.67
0.0018
1.39
0.63
0.611
0.51
0.7
0.49
0.71
4.86
0.0105
0.0035
0.0077


3002667
0.64
0.0082
1.33
0.66
0.3262
0.64
0.67
0.53
0.76
6.08
0.0009
0.0073
0.0119


3003180
0.62
0.023
1.41
0.61
0.7405
0.51
0.67
0.47
0.71
4.09
0.0402
0.0098
0.013


3004652
0.68
0.0007
1.36
0.6
0.8429
0.38
0.72
0.44
0.67
5.1
0.2088
0.0054
0.0055


3011652
0.62
0.0213
1.28
0.65
0.3949
0.62
0.67
0.52
0.75
6.93
0.0014
0.0109
0.0145


3011846
0.62
0.0278
1.34
0.63
0.611
0.49
0.71
0.49
0.71
4.56
0.025
0.0101
0.0183


3012405
0.67
0.0011
1.25
0.67
0.206
0.66
0.68
0.54
0.78
6.88
0.0001
0.0008
0.0014


3012428
0.69
0.0003
1.24
0.62
0.6786
0.47
0.71
0.48
0.7
5.68
0.0424
0.0004
0.0015


3012438
0.61
0.0307
1.3
0.59
0.8822
0.45
0.67
0.44
0.68
4.06
0.2198
0.0154
0.02


3012452
0.64
0.0078
1.4
0.64
0.5397
0.51
0.71
0.5
0.72
4.94
0.0076
0.0029
0.0066


3012453
0.66
0.0024
1.33
0.67
0.206
0.62
0.71
0.55
0.76
6.58
0.0001
0.001
0.0025


3013190
0.63
0.0162
1.22
0.64
0.5397
0.47
0.73
0.5
0.71
4.93
0.0182
0.0196
0.0231


3013468
0.67
0.0019
1.46
0.64
0.5397
0.62
0.65
0.5
0.75
5.44
0.0023
0.0013
0.0022


3013685
0.61
0.0351
1.29
0.62
0.6786
0.51
0.68
0.48
0.71
5.2
0.0298
0.032
0.0298


3014422
0.6
0.0573
1.12
0.64
0.4669
0.43
0.77
0.51
0.7
4.18
0.0118
0.018
0.0587


3015985
0.64
0.0072
1.29
0.64
0.4669
0.64
0.65
0.51
0.76
7.05
0.001
0.0053
0.0069


3017629
0.63
0.0153
1.36
0.61
0.7405
0.36
0.76
0.46
0.67
3.67
0.1401
0.0342
0.0398


3017826
0.63
0.0159
1.43
0.62
0.6786
0.62
0.62
0.48
0.74
5.59
0.0059
0.0127
0.0135


3021760
0.69
0.0003
1.4
0.71
0.0394
0.62
0.77
0.6
0.78
4.95
0
0.0001
0.0005


3022682
0.65
0.0057
1.29
0.65
0.3949
0.66
0.65
0.52
0.77
6.44
0.0005
0.0043
0.0048


3027555
0.66
0.0025
1.57
0.62
0.6786
0.74
0.55
0.49
0.79
6.4
0.0011
0.0016
0.0021


3027926
0.65
0.0039
1.32
0.64
0.5397
0.57
0.67
0.5
0.73
5.95
0.0062
0.0033
0.005


3027936
0.64
0.0104
1.11
0.6
0.7956
0.74
0.52
0.47
0.78
6.19
0.0039
0.0071
0.0078


3037391
0.67
0.0018
1.41
0.63
0.611
0.49
0.71
0.49
0.71
4
0.0191
0.0109
0.011


3037406
0.64
0.0085
1.34
0.63
0.611
0.72
0.57
0.49
0.78
7.3
0.0014
0.0052
0.0096


3037950
0.63
0.0145
1.35
0.63
0.611
0.47
0.72
0.49
0.7
4.07
0.018
0.0129
0.0227


3039980
0.65
0.0062
1.41
0.67
0.2627
0.64
0.68
0.54
0.77
6.48
0.0001
0.0022
0.0055


3039983
0.62
0.0221
1.49
0.6
0.7956
0.62
0.6
0.47
0.73
5.59
0.0126
0.0115
0.0157


3040116
0.64
0.0088
1.49
0.66
0.3262
0.51
0.74
0.53
0.73
4.93
0.0022
0.0076
0.012


3041262
0.67
0.0011
1.53
0.64
0.5397
0.62
0.65
0.5
0.75
6.49
0.0024
0.0007
0.0012


3042004
0.64
0.007
1.41
0.67
0.2627
0.68
0.66
0.53
0.78
5.3
0.0001
0.0062
0.009


3042421
0.66
0.0026
1.71
0.66
0.3262
0.66
0.66
0.53
0.77
5.87
0.0005
0.0017
0.0018


3042426
0.65
0.0048
1.39
0.66
0.3262
0.7
0.63
0.52
0.79
5.98
0.0003
0.0026
0.0037


3042429
0.62
0.0213
1.27
0.61
0.7405
0.51
0.67
0.47
0.71
4.72
0.0405
0.0366
0.0432


3042430
0.65
0.004
1.65
0.63
0.611
0..68
0.6
0.49
0.77
5.36
0.002
0.0026
0.0026


3042437
0.71
0.0001
1.4
0.68
0.1571
0.68
0.68
0.55
0.79
6.83
0.0001
0.0001
0.0001


3042453
0.64
0.0085
1.35
0.64
0.4669
0.53
0.71
0.51
0.73
3.9
0.0064
0.0108
0.0159


3048780
0.65
0.0052
1.51
0.6
0.7956
0.6
0.61
0.47
0.72
4.61
0.0194
0.0044
0.0067


3048870
0.66
0.0022
1.36
0.65
0.3949
0.55
0.71
0.5
0.73
5.03
0.0027
0.0027
0.0028


3053384
0.64
0.009
1.44
0.64
0.5397
0.47
0.73
0.5
0.71
3.82
0.0193
0.0009
0.0025


3056395
0.65
0.0044
1.38
0.64
0.4669
0.66
0.63
0.51
0.76
7.19
0.0008
0.0028
0.0047


3060052
0.68
0.0008
1.21
0.64
0.5397
0.47
0.73
0.5
0.71
3.77
0.0123
0.0019
0.0037


3061054
0.68
0.0009
1.28
0.66
0.3262
0.51
0.74
0.53
0.73
4.74
0.0019
0.0014
0.0015


3061144
0.62
0.0242
1.42
0.65
0.3949
0.55
0.71
0.52
0.73
4.87
0.0031
0.0241
0.0325


3061758
0.66
0.0032
1.34
0.64
0.4669
0.6
0.67
0.51
0.74
5.24
0.0014
0.0081
0.0219


3062023
0.68
0.0009
1.29
0.68
0.1571
0.57
0.74
0.56
0.75
5.88
0.0002
0.0002
0.0007


3064354
0.65
0.0055
1.32
0.62
0.6786
0.66
0.6
0.48
0.75
5.87
0.0046
0.0043
0.0049


3075645
0.61
0.0461
1.39
0.6
0.7956
0.64
0.59
0.47
0.74
5.92
0.0083
0.0323
0.043


3076355
0.71
0.0001
1.56
0.65
0.3949
0.57
0.7
0.52
0.74
5.9
0.0017
0.0001
0.0001


3076393
0.61
0.0477
1.25
0.64
0.4669
0.51
0.72
0.51
0.72
4.07
0.0035
0.006
0.024


3076490
0.66
0.0031
1.31
0.65
0.3949
0.64
0.66
0.52
0.76
6.63
0.0011
0.0029
0.0027


3081625
0.62
0.0197
1.21
0.61
0.7405
0.49
0.68
0.47
0.7
5.04
0.0337
0.0079
0.0115


3087828
0.68
0.0008
1.42
0.65
0.3949
0.6
0.68
0.52
0.75
5.2
0.0012
0.0004
0.0009


3087930
0.65
0.0039
1.47
0.66
0.3262
0.6
0.7
0.53
0.75
5.85
0.0015
0.005
0.0046


3088570
0.64
0.0079
1.41
0.62
0.6786
0.66
0.6
0.48
0.75
5.46
0.0049
0.0097
0.0089


3092505
0.63
0.0112
1.44
0.6
0.8429
0.66
0.56
0.46
0.74
5.61
0.0182
0.0088
0.0101


3094309
0.66
0.003
1.7
0.6
0.8429
0.57
0.61
0.46
0.71
4.94
0.0336
0.002
0.0029


3096162
0.66
0.0028
1.41
0.69
0.1164
0.68
0.7
0.56
0.79
4.95
0.0001
0.0029
0.003


3096409
0.68
0.0009
1.55
0.7
0.0837
0.53
0.79
0.6
0.75
4.94
0.0001
0.0008
0.0016


3096979
0.68
0.0008
1.38
0.67
0.206
0.64
0.7
0.55
0.77
5.5
0.0001
0.0008
0.0015


3099780
0.65
0.0046
1.44
0.63
0.611
0.64
0.62
0.49
0.75
5.78
0.0064
0.0041
0.0034


3100230
0.65
0.0048
1.31
0.64
0.5397
0.62
0.65
0.5
0.75
5.87
0.0036
0.0034
0.0049


3107638
0.65
0.0049
1.32
0.64
0.5397
0.45
0.74
0.5
0.7
4.51
0.005
0.0014
0.0068


3108472
0.69
0.0003
1.35
0.67
0.2627
0.66
0.67
0.53
0.77
6.54
0.0002
0.0003
0.0007


3108501
0.69
0.0002
1.35
0.66
0.3262
0.6
0.7
0.53
0.75
4.16
0.0017
0.0005
0.0009


3108938
0.62
0.0216
1.28
0.63
0.611
0.62
0.63
0.49
0.74
4.56
0.003
0.0125
0.0266


3111090
0.64
0.009
1.28
0.66
0.3262
0.55
0.72
0.53
0.74
5.59
0.0012
0.0054
0.0113


3111116
0.6
0.0489
1.42
0.63
0.611
0.62
0.63
0.49
0.74
5.08
0.003
0.0154
0.0273


3112517
0.68
0.0008
1.42
0.64
0.4669
0.6
0.67
0.51
0.74
6.38
0.0016
0.0003
0.0007


3114370
0.62
0.0194
1.3
0.64
0.4669
0.51
0.72
0.51
0.72
4.48
0.0061
0.0088
0.0157


3114664
0.63
0.0162
1.29
0.62
0.6786
0.53
0.67
0.48
0.71
5.21
0.0142
0.0089
0.0132


3124536
0.65
0.0044
1.28
0.64
0.4669
0.62
0.66
0.51
0.75
6.5
0.0033
0.0049
0.0055


3126094
0.66
0.0024
1.44
0.63
0.611
0.77
0.55
0.49
0.8
7.1
0.0008
0.0019
0.0019


3128680
0.6
0.0145
1.32
0.58
0.914
0.53
0.61
0.44
0.69
5.38
0.1137
0.019
0.0232


3129955
0.66
0.0028
1.36
0.64
0.4669
0.62
0.66
0.51
0.75
5.98
0.0015
0.0023
0.0044


3131973
0.67
0.001
1.36
0.69
0.1164
0.6
0.74
0.57
0.76
6.31
0.0001
0.0009
0.0014


3132336
0.64
0.0088
1.48
0.66
0.3262
0.57
0.71
0.53
0.74
4.37
0.001
0.0078
0.011


3133528
0.71
0.0001
1.48
0.69
0.1164
0.55
0.77
0.58
0.75
4.42
0.0001
0
0.0002


3134184
0.58
0.1565
1.14
0.6
0.7956
0.3
0.78
0.44
0.66
3.84
0.2446
0.0721
0.1183


3136352
0.65
0.0046
1.3
0.6
0.8429
0.62
0.59
0.46
0.73
6.73
0.0216
0.0027
0.0052


3137586
0.68
0.0006
1.39
0.62
0.6786
0.68
0.59
0.48
0.76
6.25
0.0032
0.0007
0.001


3138886
0.63
0.0135
1.31
0.6
0.8429
0.57
0.61
0.46
0.71
5.27
0.0363
0.013
0.0198


3138980
0.64
0.0076
1.36
0.65
0.3949
0.64
0.66
0.52
0.76
5.71
0.0007
0.0066
0.0076


3139053
0.66
0.0026
1.34
0.67
0.2627
0.55
0.73
0.54
0.74
5.25
0.0009
0.0048
0.0066


3139926
0.66
0.0021
1.35
0.65
0.3949
0.53
0.72
0.52
0.73
5.76
0.0026
0.0026
0.0041


3141863
0.66
0.0019
1.69
0.66
0.3262
0.62
0.68
0.53
0.76
3.82
0.0005
0.002
0.003


3145023
0.62
0.02
1.34
0.64
0.5397
0.53
0.7
0.5
0.72
5.2
0.0102
0.014
0.0172


3145956
0.66
0.002
1.33
0.64
0.4669
0.72
0.6
0.51
0.79
8.36
0.0006
0.0039
0.0057


3145966
0.65
0.0046
1.25
0.64
0.4669
0.64
0.65
0.51
0.76
5.71
0.0012
0.0033
0.006


3146538
0.65
0.006
1.33
0.62
0.6786
0.49
0.7
0.48
0.7
3.95
0.0239
0.0116
0.0213


3146566
0.64
0.0075
1.48
0.69
0.1164
0.57
0.76
0.57
0.76
5.22
0.0001
0.0037
0.0074


3146788
0.62
0.0194
1.34
0.61
0.7405
0.64
0.6
0.48
0.74
7.33
0.0099
0.0095
0.0151


3146799
0.67
0.0014
1.3
0.64
0.5397
0.72
0.59
0.5
0.79
8.32
0.0009
0.0011
0.0013


3147328
0.63
0.0121
1.34
0.62
0.6786
0.62
0.62
0.48
0.74
4.93
0.0058
0.0062
0.0144


3148628
0.63
0.012
1.53
0.66
0.3262
0.51
0.74
0.53
0.73
4.22
0.0014
0.0064
0.0118


3149768
0.64
0.0092
1.46
0.65
0.3949
0.64
0.66
0.52
0.76
6.19
0.0008
0.0019
0.0065


3149773
0.68
0.0009
1.45
0.65
0.3949
0.64
0.66
0.52
0.76
4.72
0.001
0.0004
0.0011


3149864
0.67
0.0016
1.53
0.67
0.2627
0.72
0.63
0.53
0.8
5.14
0.0001
0.0011
0.0019


3151480
0.66
0.0031
1.84
0.65
0.3949
0.6
0.68
0.52
0.75
5.11
0.0013
0.0008
0.0016


3152560
0.61
0.0378
1.31
0.64
0.4669
0.55
0.7
0.51
0.73
4.37
0.0049
0.0181
0.0211


3153532
0.62
0.0285
1.32
0.64
0.5397
0.55
0.68
0.5
0.73
5.02
0.0088
0.0236
0.0297


3157388
0.64
0.0067
1.49
0.61
0.7405
0.66
0.59
0.48
0.75
6.08
0.007
0.0058
0.0066


3157461
0.64
0.01
1.61
0.6
0.7956
0.64
0.59
0.47
0.74
5.37
0.0123
0.0074
0.01


3157723
0.64
0.0084
1.4
0.64
0.5397
0.66
0.62
0.5
0.76
5.9
0.0017
0.0043
0.0068


3157847
0.66
0.0029
1.39
0.63
0.611
0.53
0.68
0.49
0.72
5.48
0.0188
0.0036
0.0035


3164299
0.64
0.0066
1.31
0.65
0.3949
0.43
0.78
0.53
0.7
5.08
0.0065
0.0123
0.0189


3165138
0.64
0.0068
1.44
0.6
0.8429
0.66
0.56
0.46
0.74
3.75
0.0136
0.0063
0.0097


3165799
0.69
0.0005
1.48
0.66
0.3262
0.6
0.7
0.53
0.75
5.16
0.0009
0.0005
0.0007


3166029
0.65
0.0052
0.81
0.4
1
0.4
0.39
0.28
0.53
4.13
0.0174
0.0086
0.01


3166735
0.66
0.0032
1.54
0.63
0.611
0.64
0.62
0.49
0.75
5.57
0.0039
0.0053
0.0066


3167990
0.69
0.0004
1.58
0.67
0.206
0.55
0.74
0.55
0.74
6.17
0.0007
0.0004
0.0006


3168127
0.6
0.0698
1.27
0.64
0.4669
0.49
0.73
0.51
0.71
3.79
0.0102
0.0707
0.0664


3169011
0.69
0.0004
0.83
0.41
1
0.23
0.51
0.22
0.54
3.15
0.0077
0.0004
0.0006


3174268
0.7
0.0002
1.28
0.67
0.2627
0.51
0.76
0.55
0.73
5.23
0.0007
0.0002
0.0007


3174441
0.65
0.0036
1.4
0.64
0.4669
0.57
0.68
0.51
0.74
5.29
0.0035
0.007
0.0081


3175632
0.66
0.0021
1.48
0.61
0.7405
0.7
0.56
0.48
0.77
4.82
0.0038
0.0021
0.0034


3175657
0.61
0.0331
1.17
0.6
0.7956
0.49
0.67
0.46
0.7
5.56
0.0853
0.0589
0.0601


3178635
0.66
0.0034
1.52
0.64
0.4669
0.57
0.68
0.51
0.74
4.07
0.0034
0.0076
0.011


3183178
0.62
0.0205
1.52
0.61
0.7405
0.53
0.66
0.47
0.71
4.5
0.0269
0.0077
0.0146


3190449
0.61
0.0369
1.38
0.6
0.8429
0.57
0.61
0.46
0.71
6.01
0.0237
0.0196
0.0375


3192674
0.62
0.0202
1.27
0.6
0.7956
0.4
0.72
0.45
0.68
5.28
0.0966
0.0252
0.039


3197644
0.64
0.0098
1.48
0.58
0.914
0.64
0.55
0.45
0.73
5.54
0.0283
0.0057
0.0086


3199457
0.65
0.0057
1.49
0.65
0.3949
0.6
0.68
0.52
0.75
4.81
0.0031
0.0032
0.004


3199485
0.63
0.0126
1.19
0.64
0.5397
0.43
0.76
0.5
0.7
4.52
0.0271
0.0073
0.0117


3200638
0.66
0.0032
1.68
0.64
0.4669
0.62
0.66
0.51
0.75
4.31
0.0008
0.0014
0.0031


3200711
0.62
0.0208
1.25
0.63
0.611
0.53
0.68
0.49
0.72
5.61
0.0125
0.0213
0.0227


3200718
0.66
0.0026
1.25
0.62
0.6786
0.62
0.62
0.48
0.74
6.15
0.0095
0.0019
0.0035


3200725
0.66
0.002
1.34
0.62
0.6786
0.68
0.59
0.48
0.76
6.37
0.0035
0.0013
0.0023


3203822
0.66
0.0032
1.31
0.61
0.7405
0.66
0.59
0.48
0.75
4.83
0.0072
0.0045
0.0063


3205039
0.63
0.0112
1.23
0.64
0.4669
0.6
0.67
0.51
0.74
5.79
0.0019
0.0132
0.0184


3205424
0.64
0.0064
1.38
0.65
0.3949
0.57
0.7
0.52
0.74
4.05
0.003
0.0104
0.009


3212146
0.66
0.0026
1.55
0.68
0.1571
0.64
0.71
0.56
0.77
5.88
0.0001
0.0008
0.0015


3212163
0.61
0.0315
1.4
0.63
0.611
0.6
0.65
0.49
0.74
4.68
0.0069
0.0117
0.0215


3214671
0.67
0.0016
1.33
0.64
0.5397
0.68
0.61
0.5
0.77
4.47
0.0021
0.0019
0.004


3214699
0.64
0.0076
1.29
0.67
0.2627
0.55
0.73
0.54
0.74
4.43
0.0007
0.0142
0.0278


3219683
0.64
0.008
1.34
0.61
0.7405
0.57
0.63
0.47
0.72
4.71
0.0234
0.0105
0.0178


3219711
0.66
0.0021
1.54
0.65
0.3949
0.51
0.73
0.52
0.72
3.71
0.0077
0.0011
0.004


3219891
0.67
0.0012
1.74
0.62
0.6786
0.6
0.63
0.48
0.73
5.21
0.0084
0.0012
0.0026


3220159
0.65
0.0062
1.42
0.62
0.6786
0.68
0.59
0.48
0.76
7.05
0.0028
0.006
0.0071


3222054
0.66
0.0027
1.42
0.67
0.206
0.51
0.77
0.56
0.73
5.59
0.0009
0.0016
0.0026


3222984
0.64
0.0075
1.3
0.61
0.7405
0.43
0.72
0.47
0.69
4.5
0.0689
0.0069
0.0103


3223876
0.65
0.0043
1.26
0.64
0.5397
0.57
0.67
0.5
0.73
5
0.0045
0.0042
0.0071


3225580
0.63
0.0128
1.26
0.61
0.7405
0.36
0.76
0.46
0.67
3.76
0.2566
0.0745
0.0409


3226470
0.63
0.0153
1.29
0.64
0.4669
0.57
0.68
0.51
0.74
3.35
0.0021
0.0092
0.0247


3227646
0.64
0.0097
1.4
0.62
0.6786
0.55
0.66
0.48
0.72
6.22
0.0143
0.0083
0.009


3233387
0.66
0.0022
1.67
0.66
0.3262
0.66
0.66
0.53
0.77
5.74
0.0004
0.0016
0.0014


3234175
0.63
0.0141
1.34
0.64
0.5397
0.7
0.6
0.5
0.78
6.78
0.0009
0.0075
0.0112


3235500
0.65
0.0052
1.32
0.64
0.5397
0.6
0.66
0.5
0.74
4.55
0.0052
0.0067
0.0072


3237000
0.63
0.0155
1.42
0.61
0.7405
0.68
0.57
0.48
0.76
6.47
0.0066
0.013
0.0135


3237001
0.66
0.0032
1.37
0.62
0.6786
0.7
0.57
0.49
0.77
7.62
0.0021
0.003
0.0041


3239927
0.6
0.05
1.16
0.59
0.8822
0.6
0.59
0.45
0.72
4.55
0.0439
0.0275
0.0453


3239982
0.64
0.0064
1.35
0.66
0.3262
0.6
0.7
0.53
0.75
5.78
0.0005
0.0045
0.0072


3240135
0.65
0.0041
1.38
0.64
0.5397
0.49
0.72
0.5
0.71
4.11
0.0108
0.0053
0.0075


3240409
0.7
0.0002
1.31
0.71
0.0583
0.68
0.72
0.58
0.8
7.67
0
0.0001
0.0002


3240425
0.67
0.0015
1.45
0.61
0.7405
0.7
0.56
0.48
0.77
6.55
0.0031
0.0028
0.0037


3241499
0.65
0.0063
1.46
0.64
0.5397
0.53
0.7
0.5
0.72
4.32
0.0036
0.004
0.0086


3241506
0.67
0.0017
1.32
0.6
0.7956
0.66
0.57
0.47
0.75
4.59
0.0085
0.0023
0.0038


3243292
0.65
0.004
1.46
0.67
0.2627
0.6
0.71
0.54
0.75
5.81
0.0003
0.0018
0.0029


3250201
0.63
0.012
1.62
0.62
0.6786
0.57
0.65
0.48
0.73
4.64
0.0073
0.0066
0.0083


3251409
0.68
0.0008
1.39
0.67
0.206
0.53
0.76
0.56
0.74
5.94
0.0003
0.0002
0.0011


3252608
0.63
0.0173
1.26
0.64
0.5397
0.55
0.68
0.5
0.73
4.94
0.0057
0.0122
0.0165


3253445
0.67
0.0016
1.32
0.64
0.5397
0.77
0.56
0.5
0.81
6.69
0.0007
0.0013
0.0022


3253863
0.65
0.0059
1.41
0.64
0.4669
0.55
0.7
0.51
0.73
5.07
0.0071
0.0015
0.0026


3255269
0.65
0.0037
1.35
0.67
0.2627
0.6
0.71
0.54
0.75
6.58
0.0005
0.0015
0.0025


3257404
0.64
0.0104
1.47
0.61
0.7405
0.47
0.7
0.47
0.7
4.78
0.0455
0.0629
0.0592


3258021
0.67
0.0011
1.5
0.65
0.3949
0.6
0.68
0.52
0.75
5.61
0.0019
0.0015
0.0017


3259678
0.61
0.0378
1.34
0.61
0.7405
0.45
0.71
0.47
0.69
5.5
0.0718
0.023
0.0354


3361550
0.58
0.1179
1.38
0.63
0.611
0.51
0.7
0.49
0.71
4.45
0.0181
0.1173
0.1286


3262470
0.63
0.0166
1.23
0.6
0.8429
0.55
0.62
0.46
0.71
5.11
0.0448
0.0149
0.0211


3263804
0.67
0.0017
1.25
0.64
0.4669
0.57
0.68
0.51
0.74
5.79
0.001
0.0013
0.0029


3264697
0.66
0.0033
1.37
0.67
0.2627
0.53
0.74
0.54
0.73
5.83
0.0009
0.0031
0.0046


3264726
0.63
0.0143
1.52
0.58
0.914
0.62
0.56
0.45
0.72
5.14
0.0323
0.01
0.0139


3275175
0.66
0.0035
1.37
0.64
0.4669
0.57
0.68
0.51
0.74
5.13
0.0045
0.0022
0.0035


3276455
0.63
0.0168
1.26
0.61
0.7405
0.43
0.72
0.47
0.69
3.86
0.0883
0.0323
0.0325


3277709
0.69
0.0003
1.36
0.71
0.0583
0.66
0.73
0.58
0.79
4.6
0
0.001
0.0018


3279936
0.65
0.0049
1.31
0.6
0.7956
0.72
0.54
0.47
0.77
7.18
0.0043
0.0036
0.0048


3280961
0.64
0.0076
1.37
0.63
0.611
0.49
0.71
0.49
0.71
4.34
0.0322
0.016
0.0113


3282022
0.61
0.0391
1.43
0.62
0.6786
0.62
0.62
0.48
0.74
4.4
0.0063
0.0275
0.037


3282170
0.64
0.0073
1.28
0.64
0.5397
0.55
0.68
0.5
0.73
3.64
0.0035
0.0091
0.0169


3282215
0.66
0.0021
1.64
0.64
0.5397
0.62
0.65
0.5
0.75
4.71
0.0032
0.0019
0.0026


3282220
0.69
0.0004
1.66
0.68
0.1571
0.6
0.73
0.56
0.76
5.4
0.0001
0.0003
0.0005


3282254
0.65
0.0052
1.32
0.64
0.5397
0.64
0.63
0.5
0.75
5.13
0.002
0.0035
0.0058


3284025
0.64
0.008
1.29
0.67
0.206
0.45
0.8
0.57
0.72
5.09
0.0011
0.0055
0.0091


3284217
0.67
0.0015
1.39
0.66
0.3262
0.74
0.61
0.52
0.81
6.6
0.0001
0.0006
0.0011


3284603
0.64
0.0096
1.31
0.63
0.611
0.57
0.66
0.49
0.73
5.47
0.008
0.0048
0.0083


3284665
0.65
0.0043
1.44
0.62
0.6786
0.57
0.65
0.48
0.73
5.98
0.005
0.0021
0.0049


3294341
0.64
0.0107
1.39
0.63
0.611
0.49
0.71
0.49
0.71
4.54
0.016
0.0053
0.007


3294501
0.63
0.0126
1.35
0.64
0.5397
0.55
0.68
0.5
0.73
4.92
0.0073
0.0084
0.0116


3298980
0.62
0.0278
1.32
0.66
0.3262
0.55
0.72
0.53
0.74
4.08
0.0028
0.0389
0.0492


3301222
0.61
0.0387
1.34
0.61
0.7405
0.72
0.55
0.48
0.78
6.14
0.0021
0.0264
0.078


3301703
0.65
0.0052
1.4
0.68
0.1571
0.49
0.79
0.58
0.73
3.9
0.0005
0.0028
0.0045


3301858
0.62
0.0213
1.32
0.64
0.4669
0.36
0.8
0.52
0.69
4.2
0.0276
0.027
0.0287


3301863
0.65
0.0059
1.43
0.67
0.2627
0.72
0.63
0.53
0.8
7.07
0.0001
0.0041
0.0042


3302047
0.67
0.0014
1.37
0.64
0.5397
0.66
0.62
0.5
0.76
4.62
0.003
0.0024
0.0045


3304013
0.64
0.0101
1.31
0.62
0.6786
0.68
0.59
0.48
0.76
6.32
0.0039
0.0079
0.0103


3304626
0.62
0.0271
1.18
0.61
0.7405
0.47
0.7
0.47
0.7
5.7
0.0312
0.0162
0.024


3304652
0.67
0.0016
1.37
0.64
0.5397
0.47
0.73
0.5
0.71
4.89
0.0119
0.0012
0.0034


3307940
0.64
0.0096
1.32
0.61
0.7405
0.51
0.67
0.4
0.71
3.94
0.0428
0.0066
0.0098


3308532
0.63
0.0175
1.24
0.6
0.8429
0.34
0.74
0.43
0.66
5.37
0.187
0.1171
0.1202


3309267
0.62
0.0189
1.35
0.6
0.8429
0.64
0.57
0.46
0.73
4.83
0.0118
0.01
0.0202


3311304
0.68
0.0009
1.38
0.66
0.3262
0.47
0.77
0.54
0.72
3.87
0.0086
0.0027
0.0029


3317557
0.68
0.0007
1.35
0.63
0.611
0.45
0.73
0.49
0.7
3.97
0.0466
0.0078
0.0066


3325714
0.63
0.0155
1.25
0.6
0.7956
0.49
0.67
0.46
0.7
4.26
0.0761
0.012
0.0164


3325963
0.64
0.0078
1.48
0.64
0.5397
0.68
0.61
0.5
0.77
5.56
0.0015
0.0087
0.0072


3326246
0.62
0.0224
1.33
0.63
0.611
0.4
0.76
0.49
0.69
4.11
0.055
0.0349
0.0402


3326465
0.7
0.0001
1.43
0.65
0.3949
0.55
0.71
0.52
0.73
3.43
0.0027
1
0.0001


3329941
0.64
0.0067
1.3
0.65
0.3949
0.6
0.68
0.52
0.75
5
0.0017
0.0066
0.0127


3331532
0.7
0.0002
1.36
0.65
0.3949
0.66
0.65
0.52
0.77
6.06
0.001
0.0003
0.0003


3331573
0.61
0.041
1.32
0.64
0.5397
0.64
0.63
0.5
0.75
5.05
0.0021
0.0152
0.0247


3331613
0.69
0.0005
1.4
0.66
0.3262
0.62
0.68
0.53
0.76
6.7
0.000
0.0005
0.0007


3331614
0.67
0.0018
1.44
0.63
0.611
0.77
0.55
0.49
0.8
6.86
0.0006
0.002
0.0023


3333687
0.62
0.0205
1.34
0.62
0.6786
0.6
0.63
0.48
0.73
5.33
0.0128
0.0251
0.0227


3334162
0.63
0.0164
1.32
0.64
0.5397
0.49
0.72
0.5
0.71
5.02
0.0131
0.0201
0.0302


3334515
0.66
0.0027
1.33
0.6
0.7956
0.72
0.54
0.47
0.77
7.19
0.0036
0.0021
0.0032


3335173
0.66
0.0022
1.61
0.64
0.5397
0.74
0.57
0.5
0.8
6.66
0.0005
0.0011
0.0012


3335176
0.64
0.0069
1.38
0.61
0.7405
0.64
0.6
0.48
0.74
6.61
0.0111
0.0053
0.0053


3335178
0.68
0.0006
1.38
0.64
0.4669
0.68
0.62
0.51
0.77
6.69
0.0005
0.0004
0.0006


3335179
0.67
0.0012
1.5
0.66
0.3262
0.66
0.66
0.53
0.77
5.65
0.0005
0.0009
0.0011


3335181
0.67
0.0014
1.34
0.6
0.8429
0.72
0.52
0.47
0.77
8.05
0.0062
0.0023
0.003


3335182
0.67
0.0014
1.31
0.64
0.5397
0.74
0.57
0.5
0.8
8.91
0.0006
0.0015
0.0023


3335187
0.67
0.0012
1.39
0.64
0.4669
0.72
0.6
0.51
0.79
8.46
0.0003
0.0013
0.0019


3335188
0.67
0.0015
1.29
0.64
0.4669
0.77
0.57
0.51
0.81
9.17
0.0003
0.0015
0.0019


3335189
0.63
0.0123
1.29
0.58
0.914
0.68
0.52
0.45
0.74
5.49
0.0282
0.0086
0.0146


3335191
0.66
0.0021
1.33
0.62
0.6786
0.7
0.57
0.49
0.77
8.73
0.0019
0.0013
0.0024


3335231
0.66
0.0027
1.45
0.61
0.7405
0.77
0.52
0.48
0.8
7.5
0.0017
0.0027
0.0031


3337724
0.68
0.0007
1.29
0.67
0.206
0.68
0.67
0.54
0.79
7.12
0.0001
0.0008
0.0009


3338618
0.67
0.0014
1.36
0.67
0.206
0.66
0.68
0.54
0.78
7.3
0.0001
0.001
0.0017


3341466
0.62
0.0275
1.23
0.61
0.7405
0.68
0.57
0.48
0.76
5.31
0.0056
0.0256
0.0366


3341504
0.67
0.0016
1.56
0.64
0.4669
0.66
0.63
0.51
0.76
5.61
0.0015
0.0008
0.0013


3344853
0.65
0.0044
1.68
0.63
0.611
0.62
0.63
0.49
0.74
5
0.0049
0.0031
0.0031


3344889
0.63
0.0162
1.44
0.62
0.6786
0.49
0.7
0.48
0.7
3.97
0.0201
0.0071
0.0143


3345453
0.6
0.0586
1.73
0.61
0.7405
0.55
0.65
0.47
0.72
5
0.0209
0.0264
0.0332


3347691
0.62
0.0255
1.31
0.6
0.7956
0.64
0.59
0.47
0.74
6
0.0102
0.0264
0.0231


3352533
0.68
0.0005
1.25
0.62
0.6786
0.7
0.57
0.49
0.77
5.44
0.0029
0.0006
0.0011


3352561
0.6
0.0292
1.25
0.64
0.5397
0.62
0.65
0.5
0.75
4.52
0.0069
0.0438
0.0471


3352585
0.63
0.0137
1.33
0.6
0.7956
0.74
0.52
0.47
0.78
5.69
0.0024
0.0081
0.0126


3352925
0.63
0.0147
1.33
0.64
0.5397
0.6
0.66
0.5
0.74
3.22
0.0034
0.0033
0.0069


3354966
0.65
0.0039
1.31
0.64
0.5397
0.68
0.61
0.5
0.77
7.27
0.0012
0.0031
0.004


3356173
0.63
0.0135
1.38
0.63
0.611
0.6
0.65
0.49
0.74
4.81
0.0066
0.0132
0.0137


3358364
0.66
0.0034
1.41
0.6
0.8429
0.72
0.52
0.47
0.77
5.54
0.0099
0.0036
0.0041


3359382
0.66
0.0029
1.4
0.66
0.3262
0.51
0.74
0.53
0.73
4.41
0.0012
0.0005
0.0021


3362739
0.65
0.0044
1.54
0.64
0.5397
0.6
0.66
0.5
0.74
4.54
0.0037
0.0028
0.0037


3362742
0.67
0.0014
1.61
0.64
0.5397
0.62
0.65
0.5
0.75
5.27
0.0029
0.0013
0.0021


3362745
0.62
0.0233
1.39
0.62
0.6786
0.6
0.63
0.48
0.73
5.25
0.005
0.0105
0.0174


3362763
0.66
0.0027
1.24
0.63
0.611
0.53
0.68
0.49
0.72
5.42
0.0192
0.0045
0.0045


3362773
0.67
0.0014
1.36
0.65
0.3949
0.62
0.67
0.52
0.75
7.19
0.001
0.0011
0.0012


3362943
0.65
0.0035
1.66
0.64
0.4669
0.62
0.66
0.51
0.75
4.96
0.0015
0.0023
0.003


3363519
0.62
0.0216
1.31
0.57
0.9388
0.62
0.55
0.44
0.71
4.13
0.0545
0.0285
0.0343


3363981
0.63
0.0113
1.31
0.64
0.4669
0.62
0.66
0.51
0.75
3.46
0.0023
0.0399
0.0533


3364729
0.6
0.0506
1.36
0.6
0.8429
0.53
0.63
0.45
0.7
4.33
0.0626
0.0548
0.0644


3364770
0.65
0.0036
1.41
0.64
0.5397
0.57
0.67
0.5
0.73
4.17
0.0077
0.0058
0.0055


3364800
0.63
0.0121
1.34
0.66
0.3262
0.57
0.71
0.53
0.74
3.63
0.0047
0.026
0.0109


3368920
0.65
0.0049
1.42
0.64
0.4669
0.62
0.66
0.51
0.75
5.77
0.0022
0.0049
0.0053


3371737
0.63
0.0113
1.28
0.64
0.5397
0.62
0.65
0.5
0.75
6.21
0.0021
0.0143
0.0175


3372461
0.66
0.0027
1.67
0.64
0.5397
0.51
0.71
0.5
0.72
3.75
0.0086
0.0055
0.0064


3375309
0.61
0.042
1.51
0.6
0.7956
0.64
0.59
0.47
0.74
4.89
0.0196
0.0433
0.0396


3375752
0.67
0.0019
1.32
0.64
0.5397
0.66
0.62
0.5
0.76
5.07
0.0017
0.0019
0.0029


3375863
0.65
0.0038
1.33
0.64
0.4669
0.57
0.68
0.51
0.74
4.77
0.0072
0.0039
0.0039


3376090
0.65
0.0036
1.39
0.64
0.4669
0.66
0.63
0.51
0.76
5.73
0.0012
0.0028
0.0039


3376775
0.65
0.004
1.26
0.58
0.914
0.68
0.52
0.45
0.74
5.44
0.0148
0.0042
0.0074


3377457
0.65
0.0044
1.7
0.64
0.5397
0.62
0.65
0.5
0.75
5.07
0.0025
0.0029
0.0042


3377464
0.65
0.0063
1.49
0.64
0.5397
0.64
0.63
0.5
0.75
6.16
0.0023
0.0035
0.0043


3377621
0.64
0.0064
1.64
0.61
0.7405
0.7
0.56
0.48
0.77
6.49
0.003
0.0037
0.0059


3377623
0.64
0.0103
1.48
0.6
0.8429
0.66
0.56
0.46
0.74
6.38
0.0113
0.0064
0.0097


3377625
0.65
0.0053
1.37
0.58
0.914
0.74
0.49
0.45
0.77
6.68
0.0104
0.0035
0.0045


3377632
0.64
0.0092
1.36
0.58
0.914
0.68
0.52
0.45
0.74
6.13
0.0192
0.0067
0.0092


3377633
0.61
0.0311
1.25
0.61
0.7405
0.53
0.66
0.47
0.71
6.84
0.0153
0.0164
0.0315


3377659
0.67
0.0013
1.3
0.63
0.611
0.7
0.59
0.49
0.77
9.07
0.0013
0.0008
0.001


3377660
0.66
0.0028
1.32
0.64
0.5397
0.7
0.6
0.5
0.78
7.75
0.0007
0.0022
0.0032


3379122
0.67
0.0013
1.52
0.63
0.611
0.72
0.57
0.49
0.78
6.2
0.0012
0.0013
0.0016


3379574
0.64
0.0079
1.44
0.65
0.3949
0.62
0.67
0.52
0.75
4.64
0.0006
0.0042
0.0073


3382981
0.65
0.0035
1.29
0.62
0.6786
0.62
0.62
0.48
0.74
5.05
0.0104
0.0046
0.006


3382984
0.67
0.0011
1.36
0.63
0.611
0.64
0.62
0.49
0.75
5.38
0.0025
0.001
0.0018


3383148
0.67
0.0011
1.47
0.63
0.611
0.72
0.57
0.49
0.78
6.79
0.0012
0.0015
0.0019


3383149
0.65
0.0046
1.57
0.62
0.6786
0.7
0.57
0.49
0.77
5.64
0.002
0.0022
0.0038


3384489
0.64
0.0064
1.53
0.64
0.4669
0.62
0.66
0.51
0.75
5.16
0.0021
0.0022
0.0038


3384495
0.65
0.0056
1.37
0.6
0.7956
0.72
0.54
0.47
0.77
4.1
0.0066
0.01
0.0102


3385045
0.65
0.0036
1.23
0.65
0.3949
0.45
0.77
0.53
0.71
3.67
0.0035
0.0018
0.0082


3385178
0.58
0.1362
1.29
0.6
0.7956
0.49
0.67
0.46
0.7
4.14
0.0565
0.1056
0.1188


3386816
0.65
0.0036
1.32
0.64
0.5397
0.55
0.68
0.5
0.73
7.23
0.0105
0.0051
0.0041


3387176
0.64
0.0104
1.29
0.64
0.5397
0.55
0.68
0.5
0.73
3.78
0.0099
0.0152
0.0211


3387136
0.66
0.0019
1.4
0.64
0.4669
0.62
0.66
0.51
0.75
5.79
0.0047
0.0057
0.0023


3388633
0.67
0.0015
1.37
0.67
0.206
0.64
0.7
0.55
0.77
5.23
0.0001
0.0018
0.002


3393789
0.67
0.0017
1.41
0.67
0.2627
0.62
0.7
0.54
0.76
5.4
0.0005
0.0019
0.0023


3394076
0.68
0.0008
1.31
0.69
0.1164
0.66
0.71
0.56
0.78
6.9
0
0.0007
0.0011


3394529
0.61
0.0323
1.32
0.63
0.611
0.6
0.65
0.49
0.74
4.77
0.0059
0.0226
0.032


3395420
0.65
0.0036
1.4
0.62
0.6786
0.68
0.59
0.48
0.76
6.13
0.0035
0.0025
0.0041


3395427
0.61
0.0323
1.25
0.64
0.5397
0.62
0.65
0.5
0.75
5.78
0.0021
0.0212
0.0335


3400152
0.64
0.0082
1.29
0.6
0.7956
0.6
0.61
0.47
0.72
4.87
0.0243
0.0097
0.0105


3402624
0.61
0.0323
1.25
0.61
0.7405
0.51
0.67
0.47
0.71
5.33
0.0387
0.03
0.0371


3402667
0.65
0.0059
1.25
0.6
0.7956
0.64
0.59
0.47
0.74
5.61
0.0086
0.0029
0.0051


3402720
0.64
0.0064
1.52
0.65
0.3949
0.64
0.66
0.52
0.76
5.58
0.0008
0.0034
0.0047


3406062
0.68
0.0007
1.35
0.71
0.0583
0.66
0.73
0.58
0.79
4.22
0
0.0008
0.0014


3407177
0.65
0.0061
1.27
0.61
0.7405
0.45
0.71
0.47
0.69
3.45
0.0396
0.003
0.0091


3407275
0.61
0.0445
1.28
0.57
0.9388
0.49
0.62
0.43
0.68
5.04
0.1771
0.0394
0.0555


3409292
0.63
0.0132
1.79
0.63
0.611
0.64
0.62
0.49
0.75
5.69
0.0028
0.0072
0.0183


3412651
0.65
0.0052
1.38
0.64
0.5397
0.55
0.68
0.5
0.73
5.41
0.0083
0.0059
0.0065


3414226
0.66
0.0027
1.47
0.68
0.1571
0.7
0.67
0.55
0.8
6.15
0
0.0011
0.0015


3416068
0.65
0.0049
1.28
0.62
0.6786
0.68
0.59
0.48
0.76
5.61
0.0025
0.0025
0.006


3416501
0.6
0.0668
1.26
0.64
0.5397
0.49
0.72
0.5
0.71
4.89
0.0185
0.0567
0.069


3417160
0.69
0.0004
1.49
0.64
0.4669
0.62
0.66
0.51
0.75
6.56
0.0023
0.0004
0.0006


3417666
0.69
0.0005
1.35
0.62
0.6786
0.62
0.62
0.48
0.74
5.97
0.0071
0.0007
0.0009


3418209
0.64
0.0066
1.4
0.62
0.6786
0.66
0.6
0.48
0.75
3.86
0.004
0.0086
0.0101


3419262
0.64
0.0066
1.3
0.64
0.4669
0.53
0.71
0.51
0.73
5.78
0.0052
0.0064
0.0087


3419622
0.61
0.0347
1.35
0.6
0.8429
0.6
0.6
0.46
0.72
4.81
0.0319
0.019
0.0313


3421154
0.64
0.009
1.42
0.59
0.8822
0.68
0.54
0.46
0.75
5.72
0.0154
0.0067
0.0081


3421223
0.64
0.0073
1.72
0.67
0.2627
0.55
0.73
0.54
0.74
5.06
0.001
0.0048
0.0044


3421350
1.65
0.006
1.42
0.61
0.7405
0.57
0.63
0.47
0.72
5.56
0.012
0.0031
0.0042


3421492
0.63
0.0182
1.31
0.66
0.3262
0.51
0.74
0.53
0.73
4.54
0.0027
0.0156
0.0146


3421652
0.64
0.0096
1.29
0.6
0.7956
0.53
0.65
0.46
0.71
6.73
0.027
0.0057
0.0071


3421668
0.67
0.0012
1.33
0.66
0.3262
0.47
0.77
0.54
0.77
4.65
0.0056
0.003
0.0027


3427811
0.63
0.0141
1.37
0.65
0.3949
0.53
0.72
0.52
0.73
3.88
0.0036
0.0185
0.0194


3427812
0.67
0.001
1.57
0.6
0.7956
0.62
0.6
0.47
0.73
5.18
0.0197
0.001
0.0013


3428711
0.66
0.0024
1.37
0.66
0.3262
0.45
0.78
0.54
0.71
4.49
0.0058
0.0029
0.004


3428712
0.65
0.0063
1.4
0.65
0.3949
0.47
0.76
0.52
0.71
4.45
0.0126
0.0096
0.0066


3429794
0.63
0.012
1.26
0.63
0.611
0.6
0.65
0.49
0.74
5.19
0.0079
0.0164
0.0221


3430575
0.62
0.0197
1.27
0.64
0.5397
0.57
0.67
0.5
0.73
6.41
0.0063
0.0155
0.0217


3431352
0.62
0.0205
1.32
0.62
0.6786
0.6
0.63
0.48
0.73
5.55
0.0128
0.0226
0.0185


3431686
0.66
0.0021
1.33
0.69
0.1164
0.62
0.73
0.57
0.77
5.51
0.0001
0.0029
0.003


3432171
0.66
0.0031
1.16
0.66
0.3262
0.66
0.66
0.53
0.77
5.85
0.0007
0.0016
0.0016


3432352
0.62
0.0282
1.29
0.6
0.7956
0.57
0.62
0.47
0.72
5.1
0.0177
0.018
0.0328


3435860
0.67
0.0011
1.51
0.64
0.4669
0.66
0.63
0.51
0.76
4.96
0.0007
0.0013
0.0025


3435864
0.66
0.0025
1.31
0.64
0.5397
0.7
0.6
0.5
0.78
5.62
0.0011
0.0011
0.0027


3436017
0.65
0.0036
1.33
0.64
0.5397
0.7
0.6
0.5
0.78
5.3
0.0015
0.0046
0.0056


3436264
0.66
0.0033
1.71
0.64
0.5397
0.64
0.63
0.5
0.75
3.99
0.0025
0.0022
0.003


3438044
0.63
0.0132
1.38
0.64
0.4669
0.49
0.73
0.51
0.71
4.94
0.0102
0.0134
0.0192


3445545
0.61
0.0319
1.31
0.64
0.5397
0.57
0.67
0.5
0.73
5.56
0.0025
0.0164
0.0259


3445674
0.67
0.0012
1.37
0.66
0.3262
0.45
0.78
0.54
0.71
4.05
0.0037
0.0133
0.0115


3445750
0.63
0.0126
1.34
0.65
0.3949
0.64
0.66
0.52
0.76
4.13
0.0012
0.0051
0.0066


3446488
0.64
0.0098
1.41
0.61
0.7405
0.64
0.6
0.48
0.74
5.7
0.007
0.0049
0.0083


3446869
0.66
0.0035
1.31
0.62
0.6786
0.7
0.57
0.49
0.77
7.73
0.0021
0.0021
0.0026


3446885
0.63
0.0112
1.3
0.6
0.8429
0.51
0.65
0.45
0.7
4.66
0.1091
0.0106
0.0108


3452256
0.64
0.0086
1.29
0.62
0.6786
0.68
0.59
0.48
0.76
5.45
0.0047
0.0083
0.0076


3452262
0.65
0.0039
1.49
0.64
0.4669
0.57
0.68
0.51
0.74
4.64
0.0051
0.0039
0.0044


3452324
0.63
0.0128
1.35
0.64
0.5397
0.6
0.66
0.5
0.74
5.58
0.0024
0.0102
0.0204


3452349
0.66
0.0028
1.18
0.64
0.4669
0.49
0.73
0.51
0.71
6.07
0.0064
0.0042
0.007


3454729
0.66
0.0032
1.29
0.64
0.5397
0.62
0.65
0.5
0.75
7.03
0.002
0.0019
0.0033


3456599
0.67
0.0017
1.52
0.63
0.611
0.55
0.67
0.49
0.72
4.38
0.0106
0.0011
0.0024


3457550
0.67
0.001
1.31
0.67
0.2627
0.57
0.72
0.54
0.75
7.1
0.0004
0.0006
0.001


3458494
0.65
0.0036
1.34
0.66
0.3262
0.62
0.68
0.53
0.76
5.37
0.0006
0.0016
0.0029


3461302
0.65
0.0036
1.44
0.63
0.611
0.64
0.62
0.49
0.75
6.12
0.0039
0.0042
0.0044


3461431
0.68
0.001
1.3
0.67
0.2627
0.66
0.67
0.53
0.77
3.87
0.0003
0.0002
0.0007


3462710
0.64
0.0109
1.31
0.63
0.611
0.6
0.65
0.49
0.74
6.28
0.0048
0.0092
0.0124


3462846
0.63
0.0115
1.35
0.61
0.7405
0.62
0.61
0.48
0.74
3.98
0.015
0.0156
0.0133


3462861
0.64
0.0065
1.33
0.63
0.611
0.68
0.6
0.49
0.77
4.84
0.0024
0.0101
0.0108


3462867
0.69
0.0004
1.35
0.62
0.6786
0.77
0.54
0.49
0.8
7.16
0.0011
0.0007
0.0008


3462868
0.67
0.0017
1.31
0.66
0.3262
0.51
0.74
0.53
0.73
4.64
0.0047
0.0059
0.0049


3462884
0.66
0.0031
1.32
0.66
0.3262
0.6
0.7
0.53
0.75
5.34
0.0008
0.0026
0.0031


3462988
0.67
0.0014
1.48
0.6
0.8429
0.66
0.56
0.46
0.74
5.48
0.0164
0.0015
0.0017


3463596
0.68
0.0008
1.29
0.67
0.206
0.51
0.77
0.56
0.73
6.43
0.0005
0.0006
0.0009


3463603
0.72
0
1.28
0.67
0.2627
0.36
0.84
0.57
0.7
4.81
0.0041
0.0001
0.0005


3464009
0.61
0.0405
1.33
0.62
0.6786
0.64
0.61
0.48
0.75
4.21
0.0069
0.0776
0.0787


3465251
0.66
0.0022
1.53
0.68
0.1571
0.66
0.7
0.55
0.78
4.84
0.0001
0.0045
0.0061


3465252
0.62
0.0261
1.62
0.65
0.3949
0.68
0.63
0.52
0.78
6.2
0.0006
0.0064
0.0095


3465278
0.63
0.0139
1.26
0.57
0.9388
0.26
0.76
0.38
0.64
5.12
0.7659
0.0836
0.1065


3466861
0.64
0.0109
1.34
0.65
0.3949
0.51
0.73
0.52
0.72
4.4
0.0021
0.0058
0.0164


3467642
0.64
0.0065
1.49
0.62
0.6786
0.62
0.62
0.48
0.74
5.63
0.0052
0.0061
0.0065


3468015
0.64
0.007
1.4
0.63
0.611
0.57
0.66
0.49
0.73
4.68
0.0087
0.0058
0.0106


3469369
0.64
0.0083
1.26
0.64
0.4669
0.4
0.78
0.51
0.7
3.35
0.042
0.0095
0.0114


3471177
0.64
0.0071
1.31
0.62
0.6786
0.49
0.7
0.48
0.7
4.56
0.0334
0.0041
0.0072


3471377
0.69
0.0004
1.69
0.69
0.1164
0.7
0.68
0.56
0.8
5.99
0
0.0001
0.0002


3471379
0.63
0.0182
1.31
0.61
0.7405
0.45
0.71
0.47
0.69
4.4
0.0397
0.0156
0.0335


3472092
0.64
0.0092
1.34
0.63
0.611
0.7
0.59
0.49
0.77
7.77
0.002
0.0052
0.0073


3473482
0.65
0.0045
1.33
0.63
0.611
0.49
0.71
0.49
0.71
4.29
0.0228
0.0043
0.0064


3474494
0.68
0.0008
1.36
0.66
0.3262
0.72
0.62
0.52
0.8
6.28
0.0003
0.0009
0.0012


3474937
0.62
0.0197
1.4
0.61
0.7405
0.55
0.65
0.47
0.72
5.34
0.0175
0.0218
0.0268


3475623
0.65
0.0059
1.29
0.64
0.4669
0.57
0.68
0.51
0.74
4.37
0.0023
0.0099
0.0158


3475737
0.64
0.0101
1.3
0.68
0.1571
0.57
0.74
0.56
0.75
4.9
0.0001
0.008
0.0139


3476294
0.65
0.0044
1.53
0.64
0.4669
0.68
0.62
0.51
0.77
5.56
0.0006
0.0026
0.0038


3480098
0.67
0.0017
1.57
0.64
0.5397
0.57
0.67
0.5
0.73
4.3
0.0023
0.0006
0.0014


3480100
0.67
0.0016
1.28
0.62
0.6786
0.49
0.7
0.48
0.7
3.34
0.0204
0.001
0.0033


3480173
0.66
0.0024
1.25
0.64
0.4669
0.47
0.74
0.51
0.71
5.63
0.0059
0.0029
0.0049


3480201
0.67
0.0014
1.4
0.64
0.4669
0.7
0.61
0.51
0.78
5.06
0.0005
0.0009
0.0018


3480203
0.65
0.0037
1.31
0.61
0.7405
0.66
0.59
0.48
0.75
5.79
0.0084
0.0036
0.0044


3480685
0.65
0.0042
1.3
0.64
0.4669
0.7
0.61
0.51
0.78
7.01
0.0005
0.0034
0.0054


3480856
0.7
0.0002
1.34
0.65
0.3949
0.6
0.68
0.52
0.75
6.74
0.0025
0.0002
0.0003


3481480
0.68
0.0005
1.37
0.66
0.3262
0.7
0.63
0.52
0.79
4.65
0.0003
0.0012
0.001


3482124
0.6
0.0729
1.32
0.6
0.7956
0.51
0.66
0.46
0.7
5.82
0.0443
0.0289
0.0537


3482915
0.65
0.0053
1.18
0.66
0.3262
0.55
0.72
0.53
0.74
4.94
0.0009
0.0086
0.0118


3482916
0.64
0.0073
1.62
0.68
0.1571
0.66
0.7
0.55
0.78
5.01
0
0.0021
0.0035


3483215
0.67
0.0015
1.28
0.65
0.3949
0.68
0.63
0.52
0.78
7.97
0.0003
0.0014
0.0022


3484743
0.67
0.0013
1.33
0.69
0.1164
0.68
0.7
0.56
0.79
6.76
0
0.0009
0.0015


3484750
0.66
0.0035
1.52
0.68
0.1571
0.7
0.67
0.55
0.8
4.99
0
0.002
0.0021


3484756
0.62
0.0248
1.32
0.61
0.7405
0.55
0.65
0.47
0.72
4.84
0.0186
0.0147
0.0182


3484762
0.68
0.0007
1.36
0.67
0.2627
0.62
0.7
0.54
0.76
5.98
0.0003
0.0008
0.0011


3485891
0.65
0.006
1.85
0.64
0.5397
0.6
0.66
0.5
0.74
4.72
0.0051
0.0036
0.0049


3489010
0.61
0.0331
1.43
0.59
0.8822
0.57
0.6
0.45
0.71
5.16
0.0525
0.0301
0.0337


3489011
0.66
0.0024
1.47
0.62
0.6786
0.77
0.54
0.49
0.8
7.21
0.001
0.0025
0.0028


3494193
0.63
0.017
1.45
0.61
0.7405
0.64
0.6
0.43
0.74
5.1
0.0042
0.0094
0.0158


3497656
0.59
0.0881
1.2
0.59
0.8822
0.49
0.65
0.44
0.69
3.62
0.1954
0.0862
0.0967


3497658
0.67
0.001
1.3
0.67
0.2627
0.66
0.67
0.53
0.77
6.29
0.0002
0.0011
0.0015


3497823
0.67
0.001
1.36
0.64
0.5397
0.6
0.66
0.5
0.74
4.65
0.0042
0.0028
0.0035


3498048
0.66
0.0019
1.4
0.61
0.7405
0.47
0.7
0.47
0.7
4.26
0.0419
0.0006
0.0016


3498445
0.61
0.0069
1.39
0.64
0.4669
0.64
0.65
0.51
0.76
5.51
0.0019
0.0031
0.0061


3498523
0.68
0.0007
1.74
0.66
0.3262
0.7
0.63
0.52
0.79
5.3
0.004
0.0009
0.0008


3498537
0.65
0.0039
1.33
0.64
0.4669
0.55
0.7
0.51
0.73
5.07
0.0031
0.0031
0.0051


3498977
0.67
0.0015
1.56
0.58
0.914
0.64
0.55
0.45
0.73
5.18
0.0316
0.0015
0.0018


3499545
0.65
0.0042
1.28
0.64
0.4669
0.62
0.66
0.51
0.75
5.43
0.0024
0.0036
0.0052


3500408
0.62
0.02
1.37
0.64
0.5397
0.57
0.67
0.5
0.73
5.1
0.0036
0.0089
0.0195


3501216
0.66
0.0022
1.32
0.64
0.5397
0.64
0.63
0.5
0.75
5.99
0.0024
0.0019
0.0039


3501217
0.67
0.0012
1.36
0.62
0.6786
0.7
0.57
0.49
0.77
6.19
0.0024
0.0011
0.0023


3501555
0.72
0
1.55
0.67
0.206
0.66
0.68
0.54
0.78
5.52
0.0001
0.0001
0.0001


3503211
0.66
0.0027
1.33
0.65
0.3949
0.6
0.68
0.52
0.75
6.44
0.001
0.0012
0.0024


3505453
0.63
0.0137
1.59
0.63
0.611
0.6
0.65
0.49
0.74
4.58
0.0162
0.0158
0.0132


3506941
0.63
0.0166
1.46
0.64
0.4669
0.62
0.66
0.51
0.75
4.86
0.0017
0.0083
0.0156


3508731
0.66
0.0024
1.39
0.66
0.3262
0.34
0.84
0.55
0.69
4.35
0.011
0.0067
0.0093


3508732
0.64
0.0084
1.3
0.67
0.206
0.64
0.7
0.55
0.77
5.5
0.0001
0.0057
0.0103


3508761
0.64
0.0106
1.28
0.62
0.6786
0.68
0.59
0.48
0.76
6.3
0.0033
0.0061
0.0115


3509912
0.66
0.0024
1.65
0.66
0.3262
0.6
0.7
0.53
0.75
4.21
0.0007
0.0032
0.0047


3509913
0.63
0.0126
1.35
0.64
0.4669
0.53
0.71
0.51
0.73
4
0.0057
0.0109
0.0169


3510070
0.64
0.0107
1.27
0.63
0.611
0.55
0.67
0.49
0.72
6.7
0.005
0.0039
0.0138


3510382
0.66
0.0028
1.43
0.63
0.611
0.62
0.63
0.49
0.74
5.54
0.0067
0.0024
0.0031


3512558
0.67
0.0018
1.36
0.6
0.8429
0.7
0.54
0.46
0.76
7.03
0.0064
0.0012
0.002


3513710
0.64
0.0086
1.51
0.64
0.5397
0.55
0.68
0.5
0.73
4.27
0.0066
0.0133
0.0103


3517677
0.68
0.0008
1.53
0.71
0.0583
0.4
0.88
0.66
0.72
4.2
0.0001
0.0001
0.0006


3517683
0.69
0.0005
1.28
0.7
0.0837
0.6
0.76
0.58
0.77
5.37
0.0001
0.0008
0.0025


3518501
0.64
0.0066
1.34
0.64
0.5397
0.49
0.72
0.5
0.71
4.95
0.0085
0.011
0.0121


3519136
0.66
0.0031
1.29
0.64
0.4669
0.49
0.73
0.51
0.71
4.81
0.0103
0.0083
0.0112


3521962
0.62
0.0236
1.39
0.67
0.2627
0.51
0.76
0.55
0.73
5.23
0.0005
0.0157
0.0241


3524677
0.66
0.0033
1.32
0.62
0.6786
0.66
0.6
0.48
0.75
5.38
0.0027
0.0041
0.0065


3524630
0.61
0.0369
1.46
0.64
0.5397
0.53
0.7
0.5
0.72
4.55
0.008
0.0212
0.0347


3524631
0.63
0.0112
1.39
0.6
0.7956
0.64
0.59
0.47
0.74
4.7
0.0066
0.0065
0.0108


3525314
0.68
0.0008
1.47
0.64
0.5397
0.64
0.63
0.5
0.75
6.24
0.002
0.0007
0.0012


3525317
0.69
0.0003
1.62
0.64
0.4669
0.62
0.66
0.51
0.75
5.31
0.0025
0.0002
0.0004


3525320
0.67
0.0013
1.48
0.62
0.6786
0.64
0.61
0.48
0.75
5.79
0.0045
0.0008
0.0019


3525547
0.66
0.003
1.35
0.61
0.7405
0.74
0.54
0.48
0.79
5.55
0.0032
0.0028
0.0032


3525702
0.65
0.0036
1.35
0.65
0.3949
0.53
0.72
0.52
0.73
5.08
0.0037
0.0038
0.0041


3525704
0.66
0.0028
1.42
0.59
0.8822
0.66
0.55
0.46
0.74
4.7
0.0253
0.0025
0.0031


3525710
0.68
0.001
1.32
0.66
0.3262
0.68
0.65
0.52
0.78
7.86
0.0002
0.0005
0.0007


3526383
0.68
0.0005
1.35
0.67
0.2627
0.49
0.77
0.55
0.72
3.05
0.0011
0.004
0.0086


3527530
0.67
0.0011
1.46
0.64
0.5397
0.68
0.61
0.5
0.77
4.61
0.0018
0.0011
0.0014


3528208
0.63
0.0145
1.52
0.64
0.4669
0.6
0.67
0.51
0.74
4.78
0.0028
0.0168
0.0138


3529094
0.63
0.0166
1.29
0.61
0.7405
0.64
0.6
0.48
0.74
4.76
0.0114
0.0186
0.0247


3531094
0.65
0.0063
1.45
0.6
0.7956
0.53
0.65
0.46
0.71
5.15
0.0372
0.0062
0.0107


3531491
0.72
0
1.61
0.69
0.1164
0.53
0.78
0.58
0.74
4.24
0.0001
0
0


3533452
0.68
0.0009
1.43
0.65
0.3949
0.74
0.6
0.51
0.8
6.12
0.0002
0.0007
0.0011


3534950
0.67
0.0011
1.4
0.68
0.1571
0.64
0.71
0.56
0.77
6.09
0.0001
0.0004
0.0011


3535917
0.66
0.0032
1.36
0.63
0.611
0.53
0.68
0.49
0.72
4.82
0.013
0.0044
0.0046


3536669
0.7
0.0001
1.28
0.71
0.0394
0.55
0.8
0.62
0.76
6.23
0
0.0001
0.0003


3536745
0.65
0.0056
1.46
0.64
0.5397
0.53
0.7
0.5
0.72
4.96
0.0138
0.0079
0.0077


3536931
0.65
0.006
1.34
0.63
0.611
0.64
0.62
0.49
0.75
7.03
0.003
0.0022
0.043


3536934
0.65
0.0036
1.33
0.64
0.5397
0.6
0.66
0.5
0.74
4.85
0.0026
0.0037
0.0064


3536938
0.61
0.0445
1.42
0.61
0.7405
0.6
0.62
0.47
0.73
5.85
0.0138
0.0162
0.0338


3536943
0.68
0.0005
1.33
0.65
0.3949
0.64
0.66
0.52
0.76
5.95
0.0005
0.0002
0.0006


3536948
0.64
0.0074
1.29
0.64
0.5397
0.62
0.65
0.5
0.75
5.94
0.0027
0.0033
0.0087


3536949
0.63
0.0151
1.57
0.62
0.6786
0.64
0.61
0.48
0.75
5.86
0.0063
0.0045
0.0082


3536951
0.65
0.0044
1.78
0.65
0.3949
0.66
0.65
0.52
0.77
4.39
0.0008
0.0022
0.0042


3536992
0.64
0.0074
1.39
0.64
0.5397
0.6
0.66
0.5
0.74
3.75
0.0062
0.0051
0.009


3536994
0.67
0.0013
1.37
0.64
0.5397
0.7
0.6
0.5
0.78
5.98
0.0015
0.0007
0.0012


3537787
0.67
0.0012
1.39
0.69
0.1164
0.55
0.77
0.58
0.75
5.2
0.0001
0.0005
0.0012


3537795
0.63
0.0159
1.68
0.63
0.611
0.64
0.62
0.49
0.75
5.68
0.0041
0.0085
0.0098


3537796
0.65
0.0054
1.94
0.6
0.8429
0.64
0.57
0.46
0.73
4.78
0.0173
0.0058
0.005


3539104
0.65
0.0061
1.35
0.61
0.7405
0.57
0.63
0.47
0.72
6.36
0.0133
0.0029
0.0051


3539877
0.06
0.0029
1.39
0.64
0.4669
0.53
0.71
0.51
0.73
4.25
0.0135
0.0097
0.0071


3543929
0.67
0.0017
1.36
0.6
0.7956
0.74
0.52
0.47
0.78
6.03
0.004
0.0017
0.0019


3544473
0.67
0.0014
1.4
0.65
0.3949
0.66
0.65
0.52
0.77
6.41
0.0005
0.0009
0.0015


3544890
0.62
0.0192
1.55
0.62
0.6786
0.45
0.72
0.48
0.69
4.77
0.0404
0.0098
0.0177


3545534
0.63
0.0115
1.4
0.64
0.5397
0.68
0.61
0.5
0.77
6.28
0.0015
0.0067
0.0096


3549043
0.63
0.0175
1.31
0.61
0.7405
0.55
0.65
0.47
0.72
5.16
0.0193
0.0161
0.0244


3550451
0.65
0.0045
1.43
0.63
0.611
0.62
0.63
0.49
0.74
5.73
0.0037
0.0017
0.0043


3550453
0.64
0.0094
1.29
0.65
0.3949
0.62
0.67
0.52
0.75
5.01
0.0018
0.0057
0.0108


3550455
0.63
0.0166
1.3
0.63
0.611
0.43
0.74
0.49
0.69
3.85
0.0424
0.0145
0.0172


3552937
0.63
0.0157
1.32
0.59
0.8822
0.53
0.62
0.45
0.7
4.68
0.0633
0.0091
0.0235


3552938
0.62
0.0236
1.39
0.58
0.914
0.53
0.61
0.44
0.69
5.07
0.0903
0.0166
0.0315


3556198
0.66
0.0032
1.33
0.65
0.3949
0.62
0.67
0.52
0.75
6.91
0.0007
0.002
0.0027


3556224
0.71
0.0001
1.35
0.66
0.3262
0.68
0.65
0.52
0.78
5.81
0.0004
0.0002
0.0002


3556278
0.68
0.0006
1.5
0.7
0.0837
0.53
0.79
0.6
0.75
4.27
0.0001
0.0002
0.0005


3556420
0.65
0.0044
1.44
0.65
0.3949
0.62
0.67
0.52
0.75
4.13
0.0013
0.0039
0.0049


3558292
0.65
0.006
1.37
0.62
0.6786
0.68
0.59
0.48
0.76
6.74
0.0039
0.0079
0.0089


3559519
0.67
0.0017
1.43
0.66
0.3262
0.45
0.78
0.54
0.71
4.32
0.0031
0.0009
0.0024


3559556
0.64
0.0097
1.38
0.61
0.5397
0.51
0.71
0.5
0.72
4.2
0.0092
0.0063
0.016


3562436
0.74
0
1.31
0.71
0.0583
0.47
0.84
0.63
0.73
3.52
1
0
0.0003


3563349
0.67
0.0014
1.27
0.67
0.206
0.6
0.72
0.55
0.76
4.86
0.0001
0.0024
0.0057


3563970
0.67
0.0015
1.52
0.64
0.4669
0.51
0.72
0.51
0.72
3.97
0.0056
0.001
0.002


3566596
0.65
0.0041
1.51
0.65
0.3949
0.68
0.63
0.52
0.78
6.11
0.0005
0.0017
0.0022


3566603
0.62
0.0197
1.43
0.61
0.7405
0.68
0.57
0.48
0.76
5.61
0.0052
0.0159
0.0172


3566648
0.64
0.0088
1.26
0.64
0.5397
0.47
0.73
0.5
0.71
4.44
0.0169
0.0083
0.0154


3566657
0.63
0.0137
1.18
0.64
0.4669
0.45
0.76
0.51
0.7
4.83
0.0054
0.0052
0.0162


3566993
0.63
0.0159
1.29
0.57
0.9388
0.66
0.52
0.44
0.73
4.8
0.0436
0.014
0.022


3569346
0.7
0.0001
1.38
0.67
0.206
0.51
0.77
0.56
0.73
5.02
0.0006
0.0002
0.0006


3169757
0.69
0.0003
1.46
0.68
0.1571
0.64
0.71
0.56
0.77
6.3
0.0001
0.0004
0.0005


3569759
0.66
0.0035
1.33
0.64
0.4669
0.64
0.65
0.51
0.76
5.73
0.0017
0.0027
0.0045


3569819
0.68
0.001
1.4
0.64
0.5397
0.66
0.62
0.5
0.76
4.92
0.0072
0.0025
0.0041


3570456
0.63
0.0145
1.32
0.58
0.914
0.66
0.54
0.45
0.73
5.49
0.0306
0.011
0.0165


3573155
0.63
0.0164
1.22
0.61
0.7405
0.47
0.7
0.47
0.7
5.19
0.0588
0.0201
0.0213


3576551
0.64
0.0096
1.31
0.6
0.8429
0.7
0.54
0.46
0.76
5.7
0.012
0.009
0.0098


3576567
0.67
0.0017
1.65
0.66
0.3262
0.55
0.72
0.53
0.74
4.59
0.0005
0.0006
0.0018


3576712
0.61
0.0445
1.31
0.6
0.7956
0.47
0.68
0.46
0.69
4.85
0.0503
0.0279
0.043


3576730
0.61
0.0364
1.55
0.64
0.5397
0.57
0.67
0.5
0.73
5.54
0.005
0.0107
0.0157


3576939
0.67
0.0018
1.51
0.61
0.7405
0.74
0.54
0.48
0.79
5.89
0.0016
0.0011
0.0012


3576940
0.67
0.0018
1.45
0.63
0.611
0.66
0.61
0.49
0.76
5.57
0.0032
0.0019
0.0028


3577874
0.69
0.0004
1.49
0.63
0.611
0.62
0.63
0.49
0.74
4.35
0.0064
0.0006
0.0007


3577898
0.64
0.01
1.43
0.66
0.3262
0.68
0.65
0.52
0.78
5.31
0.0003
0.0046
0.0062


3577911
0.69
0.0003
1.35
0.7
0.0837
0.62
0.74
0.58
0.77
5.07
0
0.0003
0.0013


3578431
0.68
0.0009
1.29
0.66
0.3262
0.49
0.76
0.53
0.72
5.19
0.0039
0.0016
0.0028


3580188
0.61
0.0335
1.25
0.62
0.6786
0.6
0.63
0.48
0.73
5.04
0.0065
0.0225
0.043


3580204
0.64
0.008
1.33
0.67
0.2627
0.6
0.71
0f1
0.75
6.87
0.0002
0.0045
0.0068


3580587
0.6
0.0535
1.22
0.63
0.611
0.45
0.73
0.49
0.7
3.6
0.0213
0.0342
0.0667


3580953
0.67
0.0017
1.3
0.57
0.9388
0.74
0.48
0.45
0.76
7.37
0.0157
0.0046
0.0061


3589660
0.63
0.0162
1.48
0.64
0.5397
0.55
0.68
0.5
0.73
4.41
0.0073
0.0165
0.0266


3590159
0.63
0.013
1.21
0.58
0.914
0.57
0.59
0.44
0.71
5.72
0.0615
0.0099
0.014


3590352
0.6
0.0729
1.26
0.57
0.9577
0.45
0.63
0.41
0.67
5.22
0.4343
0.1028
0.118


3591851
0.66
0.002
1.31
0.64
0.5397
0.62
0.65
0.5
0.75
4.89
0.0035
0.0008
0.0021


3591858
0.7
0.0001
1.31
0.65
0.3949
0.68
0.63
0.52
0.78
7.12
0.0004
0.0001
0.0002


3591985
0.64
0.007
1.38
0.65
0.3949
0.66
0.65
0.52
0.77
5.29
0.0005
0.0064
0.0105


3592046
0.62
0.0245
1.38
0.64
0.5397
0.66
0.62
0.5
0.76
5.86
0.0025
0.0244
0.0217


3592047
0.66
0.0026
1.34
0.63
0.611
0.7
0.59
0.49
0.77
6.72
0.0117
0.0047
0.003


3592395
0.66
0.0033
1.34
0.6
0.7956
0.43
0.71
0.45
0.68
4.01
0.0895
0.0047
0.0109


3593171
0.63
0.0182
1.76
0.64
0.5397
0.62
0.65
0.5
0.75
5.31
0.0025
0.0067
0.0081


3594101
0.63
0.0164
1.38
0.67
0.206
0.53
0.76
0.56
0.74
4.51
0.0005
0.0316
0.0396


3595811
0.61
0.0307
1.26
0.61
0.7405
0.64
0.6
0.48
0.74
4.86
0.003
0.0156
0.0357


3595872
0.64
0.0094
1.5
0.61
0.7405
0.64
0.6
0.48
0.74
5.15
0.0047
0.0058
0.0088


3596235
0.67
0.0012
1.27
0.66
0.3262
0.68
0.65
0.52
0.78
3.4
0.0003
0.0026
0.0052


3597406
0.64
0.0098
1.34
0.63
0.611
0.66
0.61
0.49
0.76
6.07
0.0025
0.0037
0.0067


3597468
0.63
0.0118
1.29
0.6
0.7956
0.7
0.55
0.47
0.76
5.92
0.0027
0.0057
0.0115


3597671
0.67
0.0018
1.29
0.6
0.7956
0.55
0.63
0.46
0.71
5.39
0.0257
0.0006
0.0016


3598717
0.65
0.0054
1.37
0.6
0.7956
0.68
0.56
0.47
0.75
6.37
0.0085
0.0035
0.0043


3599449
0.64
0.0078
1.24
0.61
0.7405
0.45
0.71
0.47
0.69
4.69
0.0736
0.0165
0.0195


3602509
0.67
0.0012
1.32
0.61
0.7405
0.68
0.57
0.48
0.76
5.32
0.0057
0.0012
0.0022


3605249
0.65
0.0046
1.32
0.62
0.6786
0.7
0.57
0.49
0.77
5.35
0.0032
0.0048
0.005


3606117
0.55
0.3487
1.1
0.64
0.5397
0.45
0.74
0.5
0.7
4.66
0.0257
0.1812
0.2086


3606409
0.68
0.0008
1.67
0.67
0.206
0.72
0.65
0.54
0.8
5.41
0
0.0005
0.0009


3608201
0.63
0.0121
1.29
0.63
0.611
0.57
0.66
0.49
0.73
4.98
0.0065
0.012
0.0187


3609166
0.65
0.0054
1.43
0.64
0.4669
0.66
0.63
0.51
0.76
4.97
0.0009
0.0042
0.0054


3615597
0.63
0.0132
1.22
0.64
0.4669
0.6
0.67
0.51
0.74
4.79
0.0036
0.0201
0.0207


3615604
0.64
0.0096
1.26
0.67
0.2627
0.51
0.76
0.55
0.73
6.32
0.0019
0.0139
0.0115


3615659
0.64
0.0085
1.24
0.62
0.6786
0.57
0.65
0.48
0.73
4.57
0.0171
0.0098
0.0126


3615989
0.67
0.0017
1.33
0.66
0.3262
0.64
0.67
0.53
0.76
4.74
0.0007
0.0006
0.0013


3621014
0.61
0.0082
1.35
0.66
0.3262
0.49
0.76
0.53
0.72
5.5
0.0024
0.0039
0.0073


3623329
0.63
0.0145
1.44
0.67
0.206
0.6
0.72
0.55
0.76
5.65
0.0002
0.0028
0.0062


3624199
0.67
0.0017
1.26
0.64
0.5397
0.6
0.66
0.5
0.74
6
0.0079
0.006
0.0048


3624533
0.65
0.0043
1.34
0.66
0.3262
0.57
0.71
0.53
0.74
4.7
0.0013
0.002
0.0055


3624702
0.63
0.0112
1.41
0.64
0.4669
0.55
0.7
0.51
0.73
4.04
0.0038
0.0102
0.0119


3625565
0.59
0.0819
1.31
0.63
0.611
0.38
0.77
0.49
0.68
3.93
0.0315
0.1383
0.236


3626570
0.66
0.0024
1.42
0.64
0.4669
0.57
0.68
0.51
0.74
4.45
0.0014
0.0012
0.0035


5626585
0.64
0.0079
1.26
0.64
0.5397
0.62
0.65
0.5
0.75
5.84
0.0038
0.0044
0.0072


3626730
0.66
0.0031
1.48
0.65
0.3949
0.6
0.68
0.52
0.75
5.01
0.0014
0.0015
0.0026


3627045
0.65
0.0063
1.24
0.61
0.7405
0.45
0.71
0.47
0.69
5.25
0.0386
0.006
0.0096


3628011
0.65
0.0035
1.34
0.65
0.3949
0.64
0.66
0.52
0.76
4.38
0.001
0.0069
0.009


3628052
0.65
0.0049
1.33
0.66
0.3262
0.53
0.73
0.53
0.73
5.43
0.0016
0.0006
0.0109


3628057
0.67
0.0011
1.27
0.66
0.3262
0.47
0.77
0.54
0.72
5.14
0.0044
0.0029
0.0026


3628471
0.67
0.0017
1.57
0.65
0.3949
0.66
0.65
0.52
0.77
6.06
0.0012
0.0019
0.0018


3628924
0.66
0.0032
1.49
0.65
0.3949
0.53
0.72
0.52
0.73
4.6
0.0034
0.0059
0.0059


3630191
0.67
0.0013
1.44
0.67
0.206
0.68
0.67
0.54
0.79
6.28
0.0001
0.0005
0.0011


3631414
0.67
0.0012
1.27
0.7
0.0837
0.47
0.83
0.61
0.73
4.2
0.0011
0.0009
0.0028


3632170
0.64
0.0069
1.48
0.6
0.7956
0.72
0.54
0.47
0.77
5.68
0.004
0.0049
0.0059


3633110
0.64
0.0076
1.38
0.62
0.6786
0.6
0.63
0.48
0.73
3.97
0.0181
0.0128
0.0112


3633223
0.62
0.0265
1.27
0.6
0.8429
0.68
0.55
0.46
0.75
6.34
0.0105
0.0166
0.0227


3633226
0.63
0.018
1.53
0.63
0.611
0.55
0.67
0.49
0.72
3.92
0.0118
0.0061
0.0099


3634074
0.64
0.0094
1.51
0.62
0.6786
0.62
0.62
0.48
0.74
5.42
0.0068
0.0066
0.0094


3643958
0.64
0.0089
1.36
0.62
0.6786
0.62
0.62
0.48
0.74
5.59
0.0059
0.0115
0.013


3645267
0.63
0.0116
1.25
0.6
0.7956
0.74
0.52
0.47
0.78
6.59
0.0032
0.0073
0.0097


3645314
0.64
0.0079
1.36
0.58
0.914
0.7
0.51
0.45
0.75
5.52
0.0194
0.0077
0.0085


3645591
0.61
0.0477
1.17
0.57
0.9388
0.57
0.57
0.44
0.7
4.87
0.0798
0.0571
0.0696


3647535
0.63
0.0141
1.39
0.63
0.611
0.57
0.66
0.49
0.73
5.33
0.0054
0.0127
0.0195


3648373
0.62
0.0192
1.3
0.6
0.7956
0.51
0.66
0.46
0.7
4.56
0.0461
0.0213
0.0307


3651472
0.63
0.0125
1.31
0.63
0.611
0.55
0.67
0.49
0.72
5.07
0.0087
0.0118
0.0152


3653349
0.63
0.0134
1.29
0.64
0.4669
0.57
0.68
0.51
0.74
4.92
0.0024
0.0178
0.0289


3653673
0.66
0.0026
1.39
0.64
0.4669
0.72
0.6
0.51
0.79
6.18
0.0003
0.0019
0.0024


3655101
0.61
0.0373
1.62
0.64
0.5397
0.57
0.67
0.5
0.73
4.38
0.0052
0.0095
0.0167


3658610
0.68
0.0005
1.35
0.68
0.1571
0.6
0.73
0.56
0.76
5.67
0.0001
0.0001
0.0006


3659201
0.62
0.0224
1.38
0.63
0.611
0.55
0.67
0.49
0.72
5.26
0.0072
0.0173
0.0306


3659319
0.7
0.0002
1.51
0.68
0.1571
0.62
0.72
0.56
0.77
5.12
0.0002
0.0005
0.0007


3660917
0.66
0.0025
1.43
0.65
0.3949
0.68
0.63
0.52
0.78
2.94
0.0004
0.0073
0.0079


3660927
0.6
0.0506
1.23
0.6
0.7956
0.4
0.72
0.45
0.68
4.1
0.0736
0.0422
0.0706


3665635
0.66
0.0033
1.7
0.58
0.914
0.57
0.59
0.44
0.71
5.46
0.0453
0.0033
0.0052


3656111
0.68
0.0009
1.34
0.68
0.1571
0.55
0.76
0.57
0.75
4.13
0.0004
0.0007
0.0014


3666869
0.67
0.0013
1.75
0.68
0.1571
0.6
0.73
0.56
0.76
4.84
0.0002
0.0012
0.0015


3668992
0.61
0.0405
1.32
0.63
0.611
0.51
0.7
0.49
0.71
4.51
0.0096
0.0199
0.0326


3671113
0.59
0.0777
1.09
0.57
0.9577
0.38
0.67
0.4
0.65
4.65
0.5046
0.0513
0.0935


3677863
0.65
0.0042
1.33
0.65
0.3949
0.57
0.7
0.52
0.74
5.13
0.0038
0.0079
0.0075


3679601
0.62
0.02
1.24
0.59
0.8822
0.49
0.65
0.44
0.69
4.34
0.0902
0.0218
0.034


3683054
0.67
0.0019
1.65
0.64
0.5397
0.7
0.6
0.5
0.78
5.14
0.0011
0.0009
0.0015


3685080
0.6
0.05
1.31
0.62
0.6786
0.53
0.67
0.48
0.71
3.73
0.0116
0.0222
0.0435


3687262
0.66
0.0028
1.31
0.63
0.611
0.74
0.56
0.49
0.79
8.06
0.0009
0.0017
0.0019


3687792
0.62
0.0289
1.59
0.64
0.4669
0.66
0.63
0.51
0.76
5.54
0.0014
0.0098
0.0137


3690089
0.65
0.0037
1.4
0.62
0.6786
0.7
0.57
0.49
0.77
4.87
0.0027
0.0026
0.0037


3692857
0.64
0.0074
1.44
0.63
0.611
0.57
0.66
0.49
0.73
5.27
0.0051
0.0088
0.011


3693546
0.67
0.0016
1.42
0.62
0.6786
0.64
0.61
0.48
0.75
5.36
0.0037
0.0012
0.0023


3693711
0.66
0.0032
1.59
0.65
0.3949
0.72
0.61
0.52
0.79
4.56
0.0001
0.002
0.0038


3693737
0.65
0.0049
1.32
0.67
0.206
0.66
0.68
0.54
0.78
7.29
0.0002
0.0034
0.004


3693746
0.63
0.0116
1.38
0.64
0.4669
0.51
0.72
0.51
0.72
4.52
0.007
0.0136
0.0283


3696670
0.65
0.0049
1.36
0.67
0.2627
0.57
0.72
0.54
0.75
5.19
0.0007
0.0108
0.0113


3697925
0.67
0.0012
1.28
0.65
0.3949
0.55
0.71
0.52
0.73
4.78
0.0059
0.0016
0.0025


3699559
0.66
0.0021
1.28
0.62
0.6786
0.53
0.67
0.48
0.71
4.94
0.0137
0.0019
0.0032


3701588
0.65
0.0042
1.25
0.6
0.7956
0.57
0.62
0.47
0.72
5.79
0.0464
0.0105
0.0084


3705531
0.63
0.0155
1.5
0.65
0.3949
0.45
0.77
0.53
0.71
4.03
0.0055
0.007
0.0163


3707211
0.64
0.0089
1.5
0.64
0.4669
0.6
0.67
0.51
0.74
5.44
0.0026
0.0078
0.0077


3708006
0.64
0.0104
1.58
0.63
0.611
0.7
0.59
0.49
0.77
6.36
0.0013
0.0032
0.005


3709275
0.6
0.0517
1.31
0.6
0.8429
0.51
0.65
0.45
0.7
5.13
0.0444
0.0247
0.052


3710735
0.65
0.004
1.28
0.65
0.3949
0.7
0.67
0.52
0.78
3.96
0.0007
0.0101
0.0101


3714102
0.67
0.0018
1.4
0.62
0.6786
0.6
0.63
0.48
0.73
5.18
0.0103
0.0017
0.0022


3715142
0.67
0.0018
1.42
0.67
0.2627
0.68
0.66
0.53
0.78
5.36
0.0002
0.0009
0.0019


3715434
0.6
0.0586
1.23
0.6
0.8429
0.47
0.67
0.45
0.69
4.94
0.0832
0.0439
0.0499


3716021
0.65
0.0036
1.39
0.61
0.7405
0.68
0.57
0.48
0.76
4.6
0.0032
0.0022
0.0051


3716674
0.61
0.036
1.29
0.6
0.8429
0.62
0.59
0.46
0.73
5.02
0.0279
0.0424
0.043


3716757
0.66
0.0033
1.26
0.68
0.1571
0.57
0.74
0.56
0.75
5.68
0.0002
0.0027
0.0044


3717647
0.65
0.0038
1.3
0.68
0.1571
0.6
0.73
0.56
0.76
5.16
0.0001
0.0097
0.0109


3717681
0.61
0.0401
1.39
0.66
0.3262
0.57
0.71
0.53
0.74
5.44
0.0021
0.0178
0.0223


3717684
0.63
0.0157
1.36
0.67
0.206
0.64
0.7
0.55
0.77
7.02
0.0001
0.0087
0.0103


3718837
0.66
0.0025
1.31
0.57
0.9388
0.83
0.43
0.45
0.81
6.39
0.0049
0.0032
0.004


3719123
0.62
0.0192
1.63
0.63
0.611
0.49
0.71
0.49
0.71
4.59
0.0096
0.0043
0.01


3720778
0.64
0.0083
1..43
0.67
0.2627
0.6
0.71
0.54
0.75
5.65
0.0004
0.0037
0.0059


3720990
0.66
0.0031
1.28
0.64
0.5397
0.62
0.65
0.5
0.75
6.82
0.0019
0.0016
0.0042


3722990
0.65
0.0053
1.3
0.64
0.4669
0.55
0.7
0.51
0.73
3.96
0.0066
0.004
0.0049


3723305
0.66
0.0027
1.54
0.6
0.8429
0.64
0.57
0.46
0.73
5.32
0.0222
0.0034
0.0037


3726811
0.63
0.011
1.39
0.6
0.7956
0.47
0.68
0.46
0.69
4.59
0.095
0.0156
0.0193


3728316
0.66
0.0026
1.28
0.64
0.4669
0.6
0.67
0.51
0.74
5.72
0.004
0.0148
0.004


3729194
0.63
0.012
1.37
0.64
0.4669
0.6
0.67
0.51
0.74
4.31
0.0047
0.0118
0.015


3729227
0.65
0.0035
1.38
0.64
0.4669
0.66
0.63
0.51
0.76
6.03
0.0013
0.0027
0.0037


3732475
0.67
0.0019
1.42
0.69
0.1164
0.66
0.71
0.56
0.78
5.02
0
0.0006
0.0012


3732477
0.61
0.0382
1.27
0.65
0.3949
0.55
0.71
0.52
0.73
4.32
0.0012
0.0183
0.0408


3732479
0.64
0.0078
1.2
0.62
0.6786
0.57
0.65
0.48
0.73
6
0.0147
0.0057
0.0084


3732480
0.71
0.0001
1.49
0.67
0.2627
0.51
0.76
0.55
0.73
3.67
0.0008
0.0001
0.0003


3734754
0.65
0.0044
1.63
0.6
0.7956
0.68
0.56
0.47
0.75
4.84
0.0055
0.0031
0.0043


3734863
0.62
0.0227
1.4
0.58
0.914
0.57
0.59
0.44
0.71
5.91
0.0653
0.0115
0.0184


3737304
0.66
0.0026
1.32
0.66
0.3262
0.55
0.72
0.53
0.74
5.76
0.0017
0.0058
0.0062


3737985
0.64
0.0107
1.29
0.64
0.5397
0.57
0.67
0.5
0.73
7.3
0.006
0.0076
0.0105


3738300
0.65
0.0052
1.35
0.62
0.6786
0.72
0.56
0.49
0.78
7
0.0018
0.0041
0.0043


3739125
0.64
0.0075
1.68
0.64
0.5397
0.55
0.68
0.5
0.73
4.35
0.0074
0.009
0.0091


3739523
0.64
0.0064
1.39
0.63
0.611
0.49
0.71
0.49
0.71
5.32
0.0265
0.0046
0.0054


3740129
0.68
0.0009
1.51
0.65
0.3949
0.68
0.63
0.52
0.78
5.48
0.0005
0.0008
0.0011


3740130
0.66
0.0033
1.74
0.64
0.5397
0.6
0.66
0.5
0.74
5.11
0.0032
0.0031
0.004


3744423
0.62
0.0205
1.34
0.62
0.6786
0.68
0.59
0.48
0.76
7.41
0.0033
0.0187
0.0252


3746953
0.66
0.0035
1.49
0.63
0.611
0.55
0.67
0.49
0.72
3.92
0.0055
0.0024
0.0074


3746967
0.62
0.021
1.3
0.63
0.611
0.49
0.71
0.49
0.71
5.09
0.0174
0.0226
0.0226


3747223
0.66
0.0025
1.46
0.71
0.0394
0.68
0.73
0.59
0.8
6.51
0
0.0018
0.0026


3748953
0.65
0.0046
1.5
0.63
0.611
0.66
0.61
0.49
0.76
4.76
0.0036
0.0026
0.0032


3750786
0.64
0.0106
1.39
0.62
0.6786
0.68
0.59
0.48
0.76
5.19
0.0022
0.0074
0.0096


3752711
0.62
0.0208
1.43
0.58
0.914
0.7
0.51
0.45
0.75
5.53
0.0183
0.0168
0.0209


3754530
0.67
0.0013
1.41
0.67
0.206
0.68
0.67
0.54
0.79
4.81
0.0001
0.0012
0.0022


3754741
0.65
0.0052
1.32
0.62
0.6786
0.55
0.66
0.48
0.72
4.2
0.0157
0.0205
0.0226


3756204
0.65
0.0036
1.29
0.62
0.6786
0.55
0.66
0.48
0.72
6.43
0.0107
0.0024
0.0045


3759590
0.64
0.0077
1.26
0.6
0.7956
0.51
0.66
0.46
0.7
4.12
0.063
0.0076
0.0139


3760197
0.64
0.0084
1.36
0.57
0.9577
0.62
0.54
0.43
0.71
4.29
0.103
0.0105
0.0095


3761752
0.64
0.0082
1.34
0.64
0.5397
0.57
0.67
0.5
0.73
4.64
0.0083
0.0121
0.009


3762575
0.66
0.0024
1.36
0.6
0.7956
0.55
0.63
0.46
0.71
5.25
0.0315
0.0031
0.0044


3764121
0.65
0.004
1.38
0.6
0.7956
0.7
0.55
0.47
0.76
6.01
0.0048
0.0032
0.0045


3764125
0.65
0.0043
1.26
0.64
0.4669
0.68
0.62
0.51
0.77
5.95
0.0004
0.0022
0.0042


3764127
0.61
0.0396
1.27
0.62
0.6786
0.51
0.68
0.48
0.71
4.58
0.0399
0.0823
0.0646


3764884
0.62
0.0219
1.45
0.61
0.7405
0.62
0.61
0.48
0.74
5.24
0.0056
0.0094
0.0145


3764921
0.67
0.0011
1.45
0.64
0.5397
0.6
0.66
0.5
0.74
6.37
0.0063
0.001
0.0014


3765738
0.62
0.0285
1.26
0.64
0.5397
0.53
0.7
0.5
0.72
4.53
0.0067
0.0121
0.025


3765761
0.63
0.0177
1.33
0.61
0.7405
0.64
0.6
0.48
0.74
5.54
0.007
0.01
0.0168


3765767
0.6
0.0523
1.34
0.63
0.611
0.53
0.68
0.49
0.72
3.88
0.0161
0.0448
0.0597


3766896
0.63
0.0116
1.42
0.63
0.611
0.55
0.67
0.49
0.72
4.97
0.0094
0.0132
0.0153


3768039
0.65
0.0053
1.33
0.65
0.3949
0.45
0.77
0.53
0.71
4.65
0.0056
0.0125
0.0177


3768121
0.61
0.0387
1.2
0.64
0.5397
0.55
0.68
0.5
0.73
4.85
0.0059
0.0523
0.0601


3758258
0.68
0.0008
1.31
0.64
0.5397
0.6
0.66
0.5
0.74
4.37
0.0036
0.0021
0.0025


3769780
0.63
0.0153
1.28
0.63
0.611
0.62
0.63
0.49
0.74
6.1
0.003
0.01
0.014


3770244
0.64
0.0077
1.27
0.64
0.4669
0.6
0.67
0.51
0.74
7.96
0.0021
0.0042
0.0065


3770564
0.62
0.0248
1.39
0.59
0.8822
0.68
0.54
0.46
0.75
5.86
0.0126
0.0163
0.0233


3770565
0.61
0.0445
1.31
0.59
0.8822
0.64
0.56
0.45
0.73
6.17
0.0204
0.0246
0.0375


3770746
0.64
0.0079
1.38
0.63
0.611
0.62
0.63
0.49
0.74
6.91
0.0041
0.005
0.0051


3771059
0.58
0.1262
1.17
0.61
0.7405
0.45
0.71
0.47
0.69
4.99
0.0524
0.1338
0.1718


3771094
0.65
0.0061
1.54
0.63
0.611
0.51
0.7
0.49
0.71
4.22
0.0283
0.006
0.0058


3771337
0.63
0.0118
1.62
0.62
0.6786
0.57
0.65
0.48
0.73
4.57
0.014
0.0105
0.0118


3776189
0.67
0.0017
1.42
0.64
0.4669
0.7
0.61
0.51
0.78
5.63
0.0005
0.002
0.0023


3776219
0.61
0.0303
1.34
0.61
0.7405
0.51
0.67
0.47
0.71
4.14
0.0576
0.0301
0.029


3776236
0.62
0.0216
1.3
0.64
0.5397
0.38
0.78
0.5
0.69
3.83
0.0895
0.0201
0.0168


3776446
0.65
0.0063
1.83
0.61
0.7405
0.6
0.62
0.47
0.73
4.65
0.011
0.0043
0.0067


3776461
0.66
0.0035
1.38
0.61
0.7405
0.57
0.63
0.47
0.72
6.35
0.0166
0.0032
0.0038


3778266
0.69
0.0004
1.3
0.66
0.3262
0.62
0.68
0.53
0.76
6.28
0.0007
0.0007
0.0008


3778629
0.68
0.0006
1.5
0.67
0.2627
0.68
0.66
0.53
0.78
6.12
0.0002
0.0005
0.001


3778630
0.67
0.0016
1.42
0.59
0.8822
0.64
0.56
0.45
0.73
6.07
0.0233
0.0015
0.0022


3779850
0.65
0.0059
1.27
0.61
0.7405
0.3
0.79
0.45
0.66
4.46
0.2066
0.0216
0.0261


3781686
0.58
0.1481
1.2
0.5
0.9388
0.26
0.76
0.38
0.64
3.81
0.7859
0.2517
0.3776


3781689
0.65
0.0035
1.33
0.62
0.6786
0.55
0.66
0.48
0.72
5.5
0.0144
0.0028
0.0054


3783364
0.65
0.004
1.29
0.59
0.8822
0.57
0.6
0.45
0.71
6.36
0.0381
0.0027
0.0053


3787934
0.67
0.0013
1.31
0.67
0.2627
0.6
0.71
0.54
0.75
6.23
0.0006
0.0003
0.0008


3789817
0.65
0.0035
1.47
0.64
0.4669
0.6
0.67
0.51
0.74
5.01
0.002
0.0033
0.0053


3795442
0.63
0.0153
1.26
0.6
0.8429
0.43
0.7
0.44
0.68
4.16
0.1521
0.0254
0.0278


3796554
0.6
0.0529
1.21
0.57
0.9577
0.53
0.59
0.42
0.69
3.93
0.1323
0.0387
0.0638


3798470
0.67
0.0014
1.43
0.65
0.3949
0.55
0.71
0.52
0.73
6.12
0.0023
0.001
0.002


3800623
0.6
0.0619
1.27
0.59
0.8822
0.55
0.61
0.45
0.7
4.69
0.0615
0.0437
0.0506


3804170
0.6
0.004
1.33
0.61
0.7405
0.62
0.61
0.48
0.74
4.18
0.013
0.0044
0.0062


3804202
0.61
0.0356
1.29
0.62
0.6786
0.53
0.67
0.48
0.71
4.53
0.0156
0.0195
0.0308


3806255
0.66
0.0029
1.4
0.64
0.5397
0.68
0.61
0.5
0.77
6.51
0.0011
0.0018
0.0026


3806256
0.62
0.0197
1.3
0.62
0.6786
0.57
0.65
0.48
0.73
4.27
0.0173
0.0134
0.0211


3807476
0.64
0.0101
1.46
0.65
0.3949
0.57
0.7
0.52
0.74
4.79
0.0012
0.0045
0.0093


3807570
0.61
0.0369
1.14
0.63
0.611
0.36
0.78
0.49
0.68
4.41
0.0377
0.0102
0.0292


3807629
0.62
0.0189
1.2
0.64
0.5397
0.43
0.76
0.5
0.7
4.45
0.0242
0.004
0.0124


3808602
0.67
0.001
1.41
0.64
0.4669
0.7
0.61
0.51
0.78
7.12
0.0005
0.0009
0.0011


3809343
0.65
0.0062
1.42
0.59
0.8822
0.66
0.55
0.46
0.74
5.22
0.0186
0.0045
0.0064


3809673
0.64
0.0076
1.36
0.62
0.6786
0.68
0.59
0.48
0.76
6.13
0.0028
0.0056
0.0077


3809834
0.67
0.0012
1.27
0.66
0.3262
0.51
0.74
0.53
0.73
5.06
0.0065
0.0012
0.0017


3813298
0.66
0.0027
1.35
0.64
0.5397
0.51
0.71
0.5
0.72
5.9
0.01
0.0007
0.0025


3813299
0.6
0.05
1.17
0.6
0.7956
0.45
0.7
0.46
0.69
4.53
0.058
0.0182
0.0544


3815669
0.62
0.0224
1.42
0.58
0.914
0.64
0.55
0.45
0.73
4.46
0.0381
0.0168
0.0211


3816402
0.63
0.012
1.41
0.62
0.6786
0.6
0.63
0.48
0.73
4.6
0.0104
0.0143
0.0182


3820658
0.63
0.0147
1.29
0.57
0.9577
0.74
0.46
0.44
0.76
5.83
0.0247
0.0158
0.0184


3820705
0.63
0.0177
1.23
0.6
0.8429
0.62
0.59
0.46
0.73
6.02
0.0203
0.0154
0.0197


3820721
0.63
0.0132
1.3
0.58
0.914
0.7
0.51
0.45
0.75
5.6
0.0253
0.0141
0.0153


3820752
0.62
0.0285
1.22
0.6
0.8429
0.55
0.62
0.46
0.71
4.6
0.0444
0.038
0.0291


3822055
0.62
0.0296
1.37
0.61
0.7405
0.6
0.62
0.47
0.73
5.94
0.0089
0.0203
0.0324


3825428
0.65
0.0046
1.55
0.61
0.7405
0.64
0.6
0.48
0.74
5.55
0.006
0.0035
0.0041


3829039
0.65
0.0043
1.47
0.63
0.611
0.53
0.68
0.49
0.72
5.01
0.0099
0.0038
0.006


3829810
0.66
0.0027
1.52
0.6
0.7956
0.66
0.57
0.47
0.75
5.69
0.0069
0.0026
0.0037


3831128
0.63
0.0147
1.71
0.64
0.4669
0.66
0.63
0.51
0.76
4.79
0.0007
0.0056
0.0076


3831280
0.64
0.0073
1.28
0.62
0.6786
0.62
0.62
0.48
0.74
7.53
0.0063
0.0038
0.0054


3835412
0.64
0.007
1.57
0.62
0.6786
0.51
0.68
0.48
0.71
3.89
0.026
0.0194
0.0239


3837493
0.63
0.0145
1.29
0.59
0.8822
0.53
0.62
0.45
0.7
5.53
0.081
0.015
0.0197


3838612
0.63
0.017
1.31
0.64
0.4669
0.57
0.68
0.51
0.74
5.57
0.0031
0.0112
0.0165


3838790
0.64
0.0073
1.23
0.63
0.611
0.45
0.73
0.49
0.7
4.89
0.0206
0.0103
0.0144


3840344
0.67
0.0014
1.39
0.61
0.7405
0.57
0.63
0.47
0.72
5.71
0.023
0.0007
0.0014


3841271
0.61
0.0307
1.24
0.63
0.611
0.47
0.72
0.49
0.7
4.87
0.0209
0.0269
0.0454


3843668
0.67
0.0013
1.32
0.66
0.3262
0.51
0.74
0.53
0.73
4.81
0.0019
0.0024
0.0037


3845710
0.66
0.0032
1.4
0.6
0.8129
0.74
0.51
0.47
0.78
6.23
0.0063
0.0046
0.0045


3846115
0.61
0.0477
1.36
0.65
0.3949
0.6
0.68
0.52
0.75
5.06
0.0019
0.035
0.043


3846291
0.61
0.0327
1.26
0.61
0.7405
0.57
0.63
0.47
0.72
4.48
0.0218
0.044
0.0396


3846561
0.64
0.008
1.29
0.6
0.8429
0.68
0.55
0.46
0.75
7.21
0.0082
0.0079
0.0119


3846784
0.63
0.0113
1.53
0.6
0.7956
0.7
0.55
0.47
0.76
5.8
0.0061
0.0049
0.0068


3847357
0.65
0.0041
1.41
0.62
0.6786
0.72
0.56
0.49
0.78
6.78
0.0021
0.0048
0.0053


3849774
0.61
0.0327
1.33
0.62
0.6786
0.51
0.68
0.48
0.71
6.01
0.0264
0.0369
0.0358


3849776
0.67
0.0019
1.32
0.66
0.3262
0.55
0.72
0.53
0.74
5.29
0.0016
0.0025
0.0039


3850502
0.67
0.0016
1.36
0.64
0.4669
0.7
0.61
0.51
0.78
5.58
0.0006
0.0018
0.0015


3851604
0.63
0.0141
1.29
0.63
0.611
0.68
0.6
0.49
0.77
6.87
0.0023
0.0116
0.0134


3851902
0.64
0.0089
1.45
0.64
0.4669
0.66
0.63
0.51
0.76
5.42
0.0008
0.0065
0.0118


3854371
0.65
0.0062
1.46
0.65
0.3949
0.47
0.76
0.52
0.71
3.76
0.006
0.0124
0.0185


3855101
0.65
0.0045
1.28
0.64
0.5397
0.66
0.62
0.5
0.76
6.28
0.0013
0.0035
0.0061


3856046
0.61
0.0364
1.3
0.61
0.7405
0.36
0.76
0.46
0.67
4.68
0.1657
0.0462
0.0432


3857120
0.6
0.0511
1.22
0.63
0.611
0.49
0.71
0.49
0.71
4.3
0.02
0.0261
0.0385


3857884
0.69
0.0003
1.32
0.69
0.1164
0.68
0.7
0.56
0.79
5.03
0
0.0003
0.0007


3862168
0.65
0.0048
1.3
0.62
0.6786
0.72
0.56
0.49
0.78
8.35
0.0018
0.0049
0.0058


3862473
0.64
0.0107
1.27
0.58
0.914
0.62
0.56
0.45
0.72
6.29
0.0381
0.0067
0.0061


3867099
0.61
0.0335
1.35
0.66
0.3262
0.6
0.7
0.53
0.75
5.64
0.0012
0.0235
0.0307


3869659
0.6
0.0676
1.33
0.6
0.7956
0.53
0.65
0.46
0.71
4.49
0.0612
0.064
0.0637


3869971
0.66
0.0027
1.45
0.65
0.3949
0.51
0.73
0.52
0.72
4.79
0.0054
0.0015
0.0027


3870593
0.67
0.0013
1.32
0.69
0.1164
0.7
0.68
0.56
0.8
6.4
0
0.0012
0.0015


3872197
0.66
0.0021
1.77
0.7
0.0837
0.7
0.7
0.57
0.8
5.29
0
0.0009
0.0011


3872208
0.64
0.0093
1.26
0.63
0.611
0.62
0.63
0.49
0.74
5.59
0.0056
0.0083
0.0088


3874114
0.62
0.0239
1.26
0.64
0.5397
0.53
0.7
0.5
0.72
3.09
0.0103
0.0407
0.0433


3874280
0.66
0.0033
1.36
0.62
0.6786
0.72
0.56
0.49
0.78
7.63
0.0019
0.0027
0.0032


3875278
0.61
0.0351
1.34
0.6
0.7956
0.6
0.61
0.47
0.72
4.85
0.0204
0.0204
0.0283


3878051
0.62
0.0216
1.56
0.64
0.5397
0.57
0.67
0.5
0.73
4.85
0.0043
0.0109
0.0122


3878053
0.68
0.0009
1.38
0.67
0.2627
0.7
0.65
0.53
0.79
7.19
0.0001
0.0006
0.0009


3879490
0.62
0.0194
1.31
0.61
0.7405
0.51
0.67
0.47
0.71
3.19
0.0306
0.0149
0.0286


3881731
0.66
0.0032
1.61
0.6
0.7956
0.66
0.57
0.47
0.75
4.79
0.0098
0.003
0.0032


3881914
0.62
0.0221
0.28
0.59
0.8822
0.6
0.59
0.45
0.72
6.02
0.0309
0.0181
0.0348


3882710
0.63
0.0143
1.48
0.61
0.7405
0.62
0.61
0.48
0.74
6.5
0.0107
0.01
0.0129


3882867
0.65
0.0042
1.48
0.65
0.3949
0.55
0.71
0.52
0.73
5.07
0.0034
0.0064
0.0082


3883424
0.69
0.0003
1.3
0.64
0.4669
0.66
0.63
0.51
0.76
6.99
0.0011
0.0003
0.0007


3883533
0.67
0.0016
1.31
0.7
0.0837
0.7
0.7
0.57
0.8
6.28
0
0.0012
0.0017


3883537
0.63
0.0126
1.35
0.64
0.4669
0.55
0.7
0.51
0.73
6.1
0.0035
0.0079
0.0117


3883987
0.69
0.0003
1.3
0.6
0.7956
0.81
0.49
0.48
0.82
5.1
0.001
0.0005
0.0006


3884147
0.66
0.0026
1.36
0.64
0.4669
0.66
0.63
0.51
0.76
5.72
0.0007
0.0034
0.0057


3884334
0.69
0.0004
1.33
0.64
0.5397
0.38
0.78
0.5
0.69
4.08
0.0538
0.0053
0.0029


3884673
0.61
0.0339
1.26
0.64
0.4669
0.45
0.76
0.51
0.7
4.09
0.0145
0.0108
0.0227


3884709
0.68
0.0006
1.26
0.68
0.1571
0.55
0.76
0.57
0.75
5.2
0.0002
0.0005
0.0008


3885711
0.62
0.0205
1.26
0.64
0.5397
0.72
0.59
0.5
0.79
6.2
0.0006
0.0116
0.0164


3886656
0.66
0.0027
1.42
0.65
0.3949
0.51
0.73
0.52
0.72
5.21
0.0059
0.005
0.006


3886907
0.67
0.0011
1.34
0.71
0.0583
0.62
0.76
0.59
0.78
6.13
0
0.0009
0.0025


3887661
0.64
0.0076
1.25
0.65
0.3949
0.47
0.76
0.52
0.71
3.9
0.0078
0.0067
0.011


3888081
0.65
0.0039
1.34
0.67
0.2627
0.57
0.72
0.54
0.75
5.12
0.0004
0.002
0.0055


3888182
0.65
0.0055
1.35
0.6
0.7956
0.74
0.52
0.47
0.78
6.68
0.003
0.006
0.0055


3888253
0.67
0.0016
1.34
0.66
0.3262
0.62
0.68
0.53
0.76
5.99
0.0005
0.0015
0.002


3888289
0.65
0.0044
1.52
0.63
0.611
0.7
0.59
0.49
0.77
5.77
0.002
0.0022
0.0035


3888494
0.63
0.0137
1.3
0.63
0.611
0.62
0.63
0.49
0.74
6.08
0.0054
0.0136
0.0152


3888936
0.63
0.0118
1.28
0.61
0.7405
0.55
0.65
0.47
0.72
5.35
0.0332
0.0155
0.014


3889140
0.68
0.0009
1.29
0.64
0.5397
0.62
0.65
0.5
0.75
6.04
0.0016
0.0001
0.0011


3889782
0.66
0.0031
1.5
0.63
0.611
0.53
0.68
0.49
0.72
3.77
0.0084
0.0023
0.0043


3891221
0.62
0.0197
1.39
0.62
0.6786
0.6
0.63
0.48
0.73
4.77
0.0144
0.0114
0.0191


3891257
0.69
0.0003
1.34
0.67
0.2627
0.7
0.65
0.53
0.79
7.71
0.0001
0.0002
0.0005


3892672
0.67
0.0015
1.27
0.66
0.3262
0.66
0.66
0.53
0.77
7.8
0.0003
0.0013
0.0033


3894074
0.62
0.0258
1.31
0.61
0.7405
0.53
0.66
0.41
0.71
3.6
0.0323
0.0068
0.0165


3894508
0.67
0.0011
1.54
0.66
0.3262
0.64
0.67
0.53
0.76
5.69
0.0005
0.0006
0.0008


3894602
0.63
0.011
1.47
0.62
0.6786
0.64
0.61
0.48
0.75
5.61
0.0054
0.0069
0.0081


3895000
0.64
0.0098
1.4
0.66
0.3262
0.66
0.66
0.53
0.77
6.34
0.0004
0.007
0.0085


3896202
0.61
0.0311
1.33
0.59
0.8822
0.51
0.63
0.44
0.69
5.28
0.0961
0.026
0.033


3898306
0.59
0.0845
1.27
0.6
0.8429
0.51
0.65
0.45
0.7
3.14
0.1419
0.3259
0.2322


3901666
0.63
0.0155
1.39
0.6
0.8429
0.68
0.55
0.46
0.75
6.28
0.0099
0.0147
0.0219


3902984
0.66
0.0031
1.41
0.61
0.7405
0.55
0.65
0.47
0.72
5.3
0.023
0.0045
0.0054


3903290
0.67
0.0016
1.36
0.66
0.3262
0.66
0.66
0.53
0.77
6.63
0.0004
0.0012
0.0012


3904028
0.63
0.0121
1.35
0.6
0.7956
0.26
0.8
0.43
0.65
4.19
0.4545
0.0146
0.0257


3904029
0.67
0.0017
1.31
0.68
0.1571
0.64
0.71
0.56
0.77
8.48
0.0002
0.0004
0.0012


3904255
0.66
0.0026
1.28
0.61
0.7405
0.66
0.59
0.48
0.75
5.33
0.0098
0.0063
0.0058


3904257
0.66
0.0025
1.33
0.64
0.4669
0.77
0.57
0.51
0.81
6.08
0.0002
0.0021
0.002


3904276
0.64
0.0074
1.25
0.61
0.7405
0.53
0.66
0.47
0.71
4.43
0.04
0.0169
0.0186


3904281
0.61
0.0311
1.23
0.64
0.4669
0.45
0.76
0.51
0.7
5.01
0.0066
0.0115
0.018


3906196
0.65
0.005
1.35
0.64
0.4669
0.64
0.65
0.51
0.76
4.26
0.0013
0.0033
0.0065


3907788
0.62
0.0197
1.49
0.63
0.611
0.68
0.6
0.49
0.77
4.76
0.0018
0.0149
0.0156


3908789
0.65
0.0037
1.33
0.67
0.2627
0.68
0.66
0.53
0.78
7.31
0.0002
0.0015
0.0018


3909376
0.61
0.0351
1.28
0.61
0.7405
0.49
0.68
0.47
0.7
3.78
0.0202
0.0082
0.0186


3911474
0.67
0.001
1.47
0.64
0.5397
0.68
0.61
0.5
0.77
6.61
0.0012
0.0006
0.0009


3911564
0.69
0.0004
1.46
0.72
0.0257
0.7
0.73
0.6
0.81
5.98
0
0.0001
0.0003


3911706
0.66
0.0028
1.33
0.67
0.206
0.64
0.7
0.55
0.77
5.67
0.0003
0.002
0.0035


3911738
0.69
0.0004
1.34
0.64
0.5397
0.74
0.57
0.5
0.8
7.01
0.0008
0.0005
0.0007


3911801
0.66
0.0032
1.5
0.64
0.4669
0.66
0.63
0.51
0.76
5.97
0.0009
0.0013
0.0025


3911815
0.63
0.0147
1.61
0.64
0.4669
0.64
0.65
0.51
0.76
5.17
0.0017
0.0056
0.0084


3913564
0.62
0.021
1.33
0.58
0.914
0.6
0.57
0.44
0.7
4.54
0.0681
0.0283
0.0207


3915125
0.68
0.0007
1.5
0.65
0.3949
0.45
0.77
0.53
0.71
3.94
0.0104
0.0006
0.0011


3917896
0.67
0.0013
1.51
0.64
0.4669
0.66
0.63
0.51
0.76
5.34
0.001
0.0018
0.0021


3918586
0.66
0.0029
1.54
0.69
0.1164
0.53
0.78
0.58
0.74
3.89
0.0002
0.0015
0.0026


3918651
0.6
0.0729
1.27
0.6
0.8429
0.55
0.62
0.46
0.71
4.26
0.0417
0.0294
0.047


3918723
0.67
0.0016
1.36
0.66
0.3262
0.7
0.63
0.52
0.79
5.83
0.0002
0.0011
0.0024


3918734
0.65
0.0045
1.42
0.64
0.4669
0.6
0.67
0.51
0.74
4.32
0.0012
0.0022
0.0053


3919024
0.66
0.0033
1.4
0.65
0.3949
0.81
0.56
0.51
0.84
6.04
0.0001
0.0017
0.0017


3920401
0.65
0.0051
1.49
0.65
0.3949
0.55
0.71
0.52
0.73
4.13
0.0024
0.0094
0.0119


3920456
0.65
0.0036
1.28
0.62
0.6786
0.7
0.57
0.49
0.77
6.29
0.0018
0.002
0.0031


3920487
0.65
0.004
1.33
0.64
0.4669
0.62
0.66
0.51
0.75
4.86
0.0025
0.0027
0.0048


3922023
0.63
0.0151
1.41
0.64
0.5397
0.34
0.8
0.5
0.68
4.47
0.0392
0.0078
0.0196


3922993
0.66
0.0023
1.4
0.66
0.3262
0.7
0.63
0.52
0.79
4.05
0.0002
0.0047
0.0096


3924758
0.66
0.0021
1.41
0.63
0.611
0.51
0.7
0.49
0.71
4.23
0.0233
0.0111
0.0087


3925641
0.66
0.0024
1.32
0.67
0.2627
0.45
0.79
0.55
0.71
5.47
0.0014
0.0037
0.0061


3926090
0.62
0.023
1.3
0.66
0.3262
0.47
0.77
0.54
0.72
4.34
0.003
0.0047
0.0076


3927180
0.62
0.0202
1.49
0.61
0.7405
0.55
0.65
0.47
0.72
4.11
0.0286
0.0124
0.0136


3927228
0.64
0.0068
1.32
0.58
0.914
0.79
0.46
0.46
0.79
6.3
0.0064
0.0086
0.0088


3927229
0.65
0.0049
1.42
0.63
0.611
0.74
0.56
0.49
0.79
5.47
0.001
0.0042
0.0039


3928670
0.65
0.0039
1.4
0.64
0.5397
0.66
0.62
0.5
0.76
5.02
0.0021
0.0024
0.0044


3929943
0.63
0.0128
1.38
0.6
0.7956
0.64
0.59
0.47
0.74
6.55
0.0101
0.004
0.0092


3934699
0.6
0.0511
1.4
0.62
0.6786
0.62
0.62
0.48
0.74
4.85
0.0096
0.0353
0.0411


3935246
0.6
0.0633
1.36
0.64
0.5397
0.64
0.63
0.5
0.7
4.96
0.0017
0.0527
0.0596


3935301
0.64
0.0103
1.34
0.64
0.4669
0.66
0.63
0.51
0.76
7.04
0.001
0.0068
0.0082


3936897
0.66
0.0022
1.63
0.65
0.3949
0.55
0.71
0.52
0.73
4.74
0.0033
0.0032
0.0033


3939407
0.66
0.0029
1.35
0.64
0.5397
0.72
0.59
0.5
0.79
6.88
0.0009
0.0024
0.0025


3942668
0.67
0.0015
1.35
0.64
0.4669
0.66
0.63
0.51
0.76
7.03
0.0015
0.0007
0.0011


3945331
0.65
0.0037
1.5
0.61
0.7405
0.62
0.61
0.48
0.74
5.07
0.0167
0.0063
0.0057


3945370
0.61
0.0477
1.38
0.65
0.3949
0.53
0.72
0.52
0.73
5.14
0.0021
0.0318
0.0333


3946374
0.66
0.0024
1.34
0.64
0.4669
0.45
0.76
0.51
0.7
4.9
0.0121
0.0033
0.005


3946589
0.61
0.0477
1.34
0.61
0.7405
0.57
0.63
0.47
0.72
5.01
0.0211
0.0465
0.0531


3946677
0.6
0.0517
1.3
0.61
0.7405
0.47
0.7
0.47
0.7
4.18
0.06
0.0388
0.0527


3953804
0.72
0
1.35
0.69
0.1164
0.7
0.68
0.56
0.8
4.78
0
0.0001
0.0003


3956591
0.63
0.0128
1.34
0.6
0.7956
0.66
0.57
0.47
0.75
7.26
0.0177
0.0148
0.0097


3957262
0.62
0.0197
1.44
0.64
0.5397
0.51
0.71
0.5
0.72
4.97
0.0151
0.0191
0.0191


3959259
0.63
0.0153
1.24
0.6
0.7956
0.6
0.61
0.47
0.72
5.24
0.0095
0.0044
0.0176


3959453
0.64
0.0075
1.41
0.6
0.7956
0.62
0.6
0.47
0.73
6.95
0.0154
0.0054
0.0077


3960634
0.69
0.0005
1.63
0.65
0.3949
0.68
0.63
0.52
0.78
5.83
0.0003
0.0004
0.0006


3961482
0.66
0.0026
1.4
0.61
0.7405
0.6
0.62
0.47
0.73
5.74
0.0085
0.0017
0.0028


3962268
0.66
0.0024
1.7
0.63
0.611
0.68
0.6
0.49
0.77
6.13
0.0022
0.0012
0.0019


3962596
0.68
0.0007
1.44
0.59
0.8822
0.62
0.57
0.45
0.72
5.26
0.0335
0.0009
0.0017


3969510
0.6
0.0592
1.18
0.63
0.611
0.38
0.77
0.49
0.68
4.28
0.0539
0.0442
0.062


3969511
0.62
0.0292
1.69
0.65
0.3949
0.62
0.67
0.52
0.75
5.24
0.0011
0.0074
0.0095


3970894
0.7
0.0002
1.38
0.67
0.2627
0.74
0.62
0.53
0.81
7.84
0.0001
0.0002
0.0003


3974757
0.63
0.018
1.25
0.57
0.9388
0.53
0.6
0.43
0.69
4.61
0.1211
0.0158
0.0363


3974789
0.65
0.0052
1.48
0.65
0.3949
0.64
0.66
0.52
0.76
5.33
0.0007
0.0037
0.0049


3981154
0.65
0.0044
1.57
0.64
0.4669
0.55
0.7
0.51
0.73
4.29
0.0038
0.0024
0.0047


3981752
0.61
0.0425
1.2
0.6
0.8429
0.49
0.66
0.45
0.69
5.23
0.0726
0.0207
0.0322


3981906
0.66
0.0028
1.38
0.67
0.2627
0.66
0.67
0.53
0.77
6.5
0.0002
0.0017
0.0024


3982421
0.62
0.0239
1.42
0.66
0.3262
0.66
0.66
0.53
0.77
5.88
0.0006
0.0114
0.0152


3985558
0.65
0.0056
1.35
0.65
0.3949
0.68
0.63
0.52
0.78
7.64
0.0003
0.0039
0.0055


3985635
0.69
0.0004
1.66
0.67
0.2627
0.68
0.66
0.53
0.78
4.81
0.0002
0.0007
0.0009


3986857
0.7
0.0002
1.48
0.66
0.3262
0.55
0.72
0.53
0.74
5.55
0.0029
0.0002
0.0004


3987532
0.62
0.0252
1.57
0.63
0.611
0.62
0.63
0.49
0.74
4.64
0.0043
0.0175
0.019


3988214
0.63
0.011
1.35
0.6
0.8429
0.62
0.59
0.46
0.73
5.28
0.0238
0.0204
0.0239


3989205
0.64
0.0069
1.36
0.64
0.5397
0.74
0.57
0.5
0.8
6.93
0.0005
0.0029
0.0042


3989770
0.69
0.0003
1.41
0.69
0.1164
0.6
0.74
0.57
0.76
3.58
0.0001
0.0006
0.001


3991722
0.68
0.0009
1.65
0.69
0.1164
0.64
0.72
0.57
0.78
4.63
0
0.0019
0.0021


3993347
0.64
0.0064
1.33
0.63
0.611
0.66
0.61
0.49
0.76
7.08
0.0023
0.0058
0.008


3993349
0.65
0.0058
1.34
0.6
0.7956
0.72
0.54
0.47
0.77
6.93
0.0038
0.0039
0.007


4004822
0.69
0.0003
1.29
0.65
0.3949
0.68
0.63
0.52
0.78
4.9
0.0005
0.0005
0.0009


4007593
0.62
0.0245
1.39
0.6
0.8429
0.55
0.62
0.46
0.71
5.8
0.0372
0.0264
0.0282


4009318
0.64
0.0064
1.33
0.63
0.611
0.77
0.55
0.49
0.8
7.87
0.0008
0.0037
0.0039


4009451
0.62
0.0265
1.28
0.64
0.4669
0.62
0.66
0.51
0.75
4.69
0.0012
0.0174
0.0331


4011604
0.63
0.0141
1.35
0.6
0.8429
0.68
0.55
0.46
0.75
5.87
0.0106
0.0075
0.0114


4011967
0.63
0.0151
1.27
0.64
0.4669
0.64
0.65
0.51
0.76
6.49
0.001
0.0109
0.0171


4012169
0.64
0.0073
1.29
0.67
0.206
0.6
0.72
0.55
0.76
6.4
0.0004
0.0052
0.0081


4012627
0.68
0.0008
1.39
0.68
0.1571
0.64
0.71
0.56
0.77
6.08
0.0001
0.0006
0.0009


4012632
0.61
0.0391
1.33
0.63
0.611
0.51
0.7
0.49
0.71
4.5
0.0112
0.0213
0.0316


4012759
0.64
0.007
1.56
0.64
0.5397
0.57
0.67
0.5
0.73
4.05
0.0056
0.0127
0.0139


4013274
0.65
0.0041
1.4
0.66
0.3262
0.57
0.71
0.53
0.74
4.21
0.0009
0.0074
0.0108


4013282
0.69
0.0004
1.52
0.65
0.3949
0.7
0.62
0.52
0.78
5.6
0.0004
0.0003
0.0005


4015535
0.64
0.0076
1.29
0.65
0.3949
0.6
0.68
0.52
0.75
5.28
0.0011
0.0035
0.0091


4016549
0.66
0.0031
1.48
0.67
0.2627
0.62
0.7
0.54
0.76
4.89
0.0004
0.0045
0.0074


4016573
0.66
0.0032
1.32
0.64
0.4669
0.64
0.65
0.51
0.76
7.61
0.0019
0.0023
0.0031


4019367
0.64
0.008
1.33
0.64
0.5397
0.66
0.62
0.5
0.76
5.5
0.0012
0.0038
0.0084


4019418
0.66
0.0024
1.26
0.64
0.5397
0.57
0.67
0.5
0.73
5.56
0.0056
0.0078
0.0058


4019610
0.64
0.0078
1.37
0.62
0.6786
0.74
0.55
0.49
0.79
5.86
0.0016
0.0072
0.0077


4020462
0.67
0.0012
1.26
0.63
0.611
0.36
0.78
0.49
0.68
5
0.0833
0.0045
0.0047


4024375
0.65
0.0051
1.48
0.62
0.6786
0.68
0.59
0.48
0.76
5.36
0.0037
0.0039
0.0058


4024376
0.64
0.0109
1.54
0.64
0.4669
0.6
0.67
0.51
0.74
5.29
0.0018
0.0106
0.0159


4024377
0.63
0.0141
1.31
0.6
0.8429
0.64
0.57
0.46
0.73
6.91
0.0175
0.0103
0.0137


4024378
0.62
0.0208
1.61
0.61
0.7405
0.57
0.63
0.47
0.72
5.3
0.0198
0.0133
0.0213


4024379
0.65
0.0039
1.49
0.64
0.4669
0.68
0.62
0.51
0.77
6.23
0.0008
0.0025
0.0038


4030986
0.7
0.0002
1.48
0.69
0.1164
0.6
0.74
0.57
0.76
5.29
0.0001
0.002
0.0004


4034997
0.65
0.0056
1.39
0.66
0.3262
0.55
0.72
0.53
0.74
4.44
0.0019
0.0082
0.0113


4035834
0.64
0.0097
1.3
0.54
0.9881
0.66
0.48
0.42
0.71
6.32
0.1411
0.0154
0.016


4035835
0.67
0.0012
1.4
0.67
0.206
0.6
0.72
0.55
0.76
4.21
0.0003
0.0001
0.0007


4035838
0.63
0.0166
1.27
0.61
0.4669
0.51
0.72
0.51
0.72
7.03
0.0099
0.011
0.014


4035839
0.65
0.0058
1.31
0.63
0.611
0.57
0.66
0.49
0.73
6.89
0.0109
0.0056
0.0068


4040526
0.67
0.0013
1.37
0.62
0.6786
0.7
0.57
0.49
0.77
7.07
0.002
0.0013
0.0015


4041367
0.63
0.0147
1.28
0.58
0.914
0.51
0.62
0.44
0.69
4.36
0.151
0.0166
0.0219


4041822
0.65
0.0044
1.29
0.58
0.914
0.77
0.48
0.46
0.78
5.7
0.0066
0.0037
0.0051


4043125
0.65
0.0051
1.29
0.61
0.7405
0.55
0.65
0.47
0.72
4.38
0.0262
0.0108
0.0129


4044199
0.65
0.0056
1.22
0.64
0.4669
0.55
0.7
0.51
0.73
6.37
0.0034
0.0044
0.0069


4044413
0.63
0.0121
1.24
0.63
0.611
0.47
0.72
0.49
0.7
4.71
0.0241
0.0129
0.0129


4047577
0.63
0.0121
1.4
0.64
0.5397
0.74
0.57
0.5
0.8
5.82
0.0006
0.0086
0.0074


4052399
0.69
0.0003
1.46
0.69
0.1164
0.6
0.74
0.57
0.76
5.7
0.0001
0.0005
0.0008


4055295
0.7
0.0001
1.45
0.64
0.5397
0.62
0.65
0.5
0.75
5.94
0.0031
0.0002
0.0002


4055302
0.69
0.0004
1.29
0.69
0.1164
0.74
0.66
0.56
0.82
4.81
0
0.0005
0.001


2720180
0.61
0.0307
1.74
0.61
0.7405
0.66
0.59
0.48
0.75
4.96
0.0116
0.0244
0.0176


2347642
0.71
0.0001
1.11
0.69
0.1164
0.45
0.83
0.6
0.72
6.16
0.0001
0
0.0007


2395344
0.73
0
1.2
0.66
0.3262
0.83
0.56
0.52
0.85
4.69
0
0
0.0001


2397069
0.7
0.0002
1.15
0.69
0.1164
0.64
0.72
0.57
0.78
6.11
0
0
0.0002


2430377
0.63
0.0151
1.07
0.61
0.7405
0.53
0.66
0.4
0.71
5.43
0.034
0.0319
0.0413


2448270
0.68
0.0007
1.08
0.61
0.5397
0.62
0.65
0.5
0.75
6.9
0.005
0.0017
0.0021


2553581
0.67
0.0012
1.14
0.62
0.6786
0.66
0.6
0.48
0.75
4.92
0.0057
0.0005
0.0017


2600700
0.74
0
1.16
0.65
0.3949
0.72
0.61
0.52
0.79
4.7
0.0006
0
0.0001


2624519
0.7
0.0002
1.12
0.61
0.7405
0.72
0.55
0.48
0.78
4.56
0.003
0.0005
0.0007


2651846
0.67
0.0011
1.16
0.64
0.5397
0.66
0.62
0.5
0.76
3.02
0.001
0.0009
0.0024


2682441
0.69
0.0004
1.14
0.62
0.6786
0.74
0.55
0.49
0.79
5.91
0.001
0.0006
0.0015


2704512
0.74
0
1.16
0.66
0.3262
0.77
0.6
0.52
0.82
4.33
0.0001
0
0


2704702
0.74
0
1.11
0.64
0.4669
0.74
0.59
0.51
0.8
7.7
0.0004
0
0.0001


2902832
0.74
0
0.96
0.33
1
0.51
0.22
0.27
0.44
6.72
0.001
0
0.0001


2918558
0.71
0.0001
1.19
0.67
0.2627
0.4
0.82
0.56
0.71
5.01
0.0065
0.0005
0.0005


3031661
0.76
0
0.94
0.25
1
0.47
0.12
0.23
0.29
6.09
0
0
0


3212761
0.77
0
1.24
0.7
0.0837
0.77
0.66
0.56
0.83
4.25
0
0
0


3268183
0.66
0.0031
1.04
0.63
0.611
0.66
0.61
0.49
0.76
6.74
0.003
0.0036
0.0055


3472753
0.71
0.0001
0.94
0.33
1
0.36
0.32
0.23
0.46
7.02
0.0004
0.0002
0.0005


3501557
0.7
0.0002
1.22
0.66
0.3262
0.6
0.7
0.53
0.75
4.53
0.0023
0.0004
0.0005


3543621
0.65
0.0039
0.94
0.36
1
0.53
0.26
0.29
0.49
5.01
0.0111
0.0171
0.0139


3541113
0.7
0.0002
1.12
0.67
0.2627
0.6
0.71
0.54
0.75
6.09
0.0008
0.0003
0.0004


3562041
0.71
0.0001
1.27
0.7
0.0837
0.64
0.73
0.58
0.78
6.32
0
0.0002
0.0004


3661099
0.67
0.0016
1.0
0.66
0.3262
0.57
0.71
0.53
0.74
6.54
0.0022
0.0022
0.004


3667907
0.7
0.0002
1.06
0.63
0.611
0.6
0.65
0.49
0.74
7.88
0.0044
0.0003
0.0005


3701840
0.65
0.0042
1.1
0.64
0.4669
0.51
0.72
0.51
0.72
5.52
0.0072
0.0019
0.0036


3840609
0.66
0.0029
1.19
0.67
0.2627
0.4
0.82
0.56
0.71
3.06
0.0048
0.0042
0.0072


3889144
0.71
0.0001
1.13
0.64
0.4669
0.68
0.62
0.51
0.77
5.67
0.0004
0
0.0002


3889625
0.73
0
1.21
0.66
0.3262
0.66
0.66
0.53
0.77
5.21
0.0004
0
0


3897081
0.71
0.0001
1.15
0.71
0.0394
0.55
0.8
0.62
0.76
5.7
0
0.0002
0.0006


3902441
0.67
0.001
0.95
0.35
1
0.38
0.33
0.25
0.48
6.27
0.0007
0.0031
0.0047


4026042
0.66
0.0027
1.16
0.65
0.3949
0.55
0.71
0.52
0.73
7.94
0.0016
0.0004
0.0014









Performance of the 1,425 detected biomarkers across different metrics for the recurrence endpoint on the subset of patients with LNI negative (n=129). See Example 2 for explanation of metrics.






















TABLE 20

















UVA
UVA




WILCOX









HR
OR




P-
KS P-
T-TEST




CUT
KM P-
SURV
P-
P-


CLASSIFIER
AUC
VALUE
VALUE
P-VALUE
SENSITIVITY
SPECIFICITY
PPV
NPV
OFF
VALUE
AUC
VALUE
VALUE




























nb: 3169011
0.94
0.0003
0.0002
0
0.89
0.86
0.94
0.75
0.48
0.001
0.92
0.003
0.007


3889144


knn: 3169011
0.92
0.0013
0.0045
0.0001
0.83
0.86
0.94
0.67
0.53
0.0103
0.9
0.001
0.009


3840609


rf: 3169011
0.92
0.0015
0.0007
0.0001
0.89
0.86
0.94
0.75
0.27
0.0013
0.94
0.004
0.01


3889144


nb: 3169011
0.92
0.0005
0.0001
0.0005
0.78
1
1
0.64
0.54
0
0.89
0.002
0.011


2553581


svm: 3169011
0.91
0.0008
0.0006
0.0003
0.72
1
1
0.58
0.39
0.0046
0.91
0.015
0.012


3889625


nb: 3169011
0.87
0.003
0.0083
0.0016
0.83
0.86
0.94
0.67
0.54
0.0013
0.89
0.005
0.012


3969511


knn: 3562041
0.87
0.0055
0.0464
0.0027
0.89
0.57
0.84
0.67
0.37
0.0167
0.85
0.006
0.012


2397069


knn: 3969511
0.82
0.0049
0.0344
0.0023
0.78
0.86
0.93
0.6
0.5
0.0409
0.82
0.049
0.013


3962268


nb: 3169011
0.87
0.0039
0.0018
0.0019
0.78
1
1
0.64
0.53
0.0005
0.87
0.003
0.013


3151480


svm: 3169011
0.89
0.0018
0.0083
0.0006
0.72
0.86
0.93
0.55
0.23
0.0041
0.9
0.008
0.013


3661099


rf: 3169011
0.86
0.0049
0.003
0.0012
0.89
0.86
0.94
0.75
0.47
0.001
0.89
0.003
0.013


2397069


nb: 3169011
0.87
0.003
0.0048
0.002
0.72
0.86
0.93
0.55
0.56
0.0038
0.86
0.007
0.013


3498523


rf: 3169011
0.87
0.0053
0.0227
0.0019
0.72
0.86
0.93
0.55
0.6
0.0301
0.87
0.02
0.013


3889625


nb: 3169011
0.9
0.0014
0.0048
0.0018
0.72
1
1
0.58
0.54
0.0002
0.87
0.004
0.013


3212761


nb: 3169011
0.87
0.003
0.0048
0.0021
0.72
0.86
0.93
0.55
0.53
0.0038
0.86
0.007
0.014


3872197


knn: 3169011
0.9
0.0021
0.0073
0.0005
0.78
0.86
0.93
0.6
0.52
0.0207
0.87
0.014
0.014


3661099


nb: 3169011
0.87
0.0039
0.0048
0.0035
0.72
0.86
0.93
0.55
0.54
0.0038
0.86
0.005
0.014


3831128


svm: 3169011
0.93
0.0004
0.0006
0.0001
0.67
1
1
0.54
0.55
0.0017
0.92
0.001
0.015


3840609


nb: 3169011
0.87
0.0039
0.0018
0.0015
0.78
1
1
0.64
0.57
0.0005
0.88
0.005
0.015


3501555


svm: 3562041
0.82
0.0141
0.0325
0.0028
0.72
0.86
0.93
0.55
0.24
0.0231
0.83
0.03
0.015


3969511


svm: 3169011
0.92
0.0005
0.0001
0.0005
0.61
1
1
0.5
0.46
0.0023
0.91
0.002
0.015


2553581


svm: 3169011
0.94
0.0003
0.0001
0.0001
0.78
1
1
0.64
0.32
0.0005
0.93
0.001
0.015


3562041


nb: 3169011
0.89
0.0018
0.0006
0.0014
0.72
1
1
0.58
0.55
0.0002
0.85
0.004
0.015


3962268


svm: 3169011
0.87
0.0039
0.0018
0.0021
0.72
1
1
0.58
0.32
0.0002
0.86
0.004
0.016


3151480


rf: 3169011
0.84
0.011
0.0104
0.0035
0.78
0.86
0.93
0.6
0.53
0.0054
0.85
0.008
0.016


3501555


nb: 3169011
0.84
0.0076
0.0048
0.0029
0.72
1
1
0.58
0.55
0.0002
0.85
0.005
0.016


2553585


svm: 3169011
0.9
0.0014
0.003
0.0002
0.72
0.86
0.93
0.55
0.38
0.0486
0.91
0.014
0.017


3551833


svm: 3169011
0.87
0.0039
0.0018
0.0012
0.78
1
1
0.64
0.07
0.0005
0.86
0.004
0.017


3501555


rf: 3562041
0.79
0.0316
0.0511
0.0052
0.89
0.71
0.89
0.71
0.44
0.0031
0.81
0.022
0.017


3719123


nb: 3169011
0.84
0.0076
0.0018
0.0041
0.78
1
1
0.64
0.53
0.0005
0.85
0.005
0.018


3666869


nb: 3169011
0.9
0.001
0.0083
0.0007
0.61
1
1
0.5
0.61
0.0055
0.88
0.003
0.018


3551833


knn: 3169011
0.85
0.0075
0.0344
0.0035
0.78
0.86
0.93
0.6
0.53
0.0054
0.85
0.007
0.018


3501555


svm: 3169011
0.87
0.003
0.0018
0.0008
0.72
1
1
0.58
0.26
0.0002
0.88
0.003
0.018


3962268


nb: 3169011
0.85
0.0061
0.0202
0.0037
0.72
0.86
0.93
0.55
0.52
0.0041
0.86
0.009
0.018


3661099


knn: 3169011
0.88
0.0043
0.0104
0.0025
0.89
0.57
0.84
0.67
0.47
0.0159
0.87
0.011
0.018


2553581


svm: 2553581
0.79
0.0245
0.0431
0.0044
0.89
0.57
0.84
0.67
−0.02
0.026
0.79
0.038
0.018


3562041


svm: 3562041
0.83
0.0116
0.0325
0.0059
0.83
0.71
0.88
0.63
−0.37
0.009
0.83
0.022
0.019


2397069


nb: 3169011
0.83
0.0094
0.0048
0.0064
0.72
0.71
0.87
0.5
0.51
0.0266
0.82
0.009
0.019


3719123


nb: 3169011
0.93
0.0004
0.0006
0.0003
0.61
1
1
0.5
0.64
0.0004
0.91
0.001
0.02


3840609


rf: 3169011
0.89
0.0033
0.0104
0.001
0.67
1
1
0.54
0.66
0.0014
0.88
0.004
0.02


3969511


nb: 3169011
0.94
0.0003
0.0006
0.0001
0.78
1
1
0.64
0.56
0.0005
0.92
0
0.02


3562041


rf: 3169011
0.86
0.0064
0.0227
0.002
0.61
1
1
0.5
0.66
0.0001
0.88
0.001
0.021


3840609


svm: 3169011
0.85
0.0061
0.0048
0.0038
0.67
1
1
0.54
0.42
0.0006
0.85
0.007
0.021


2553585


rf: 3169011
0.9
0.0022
0.0164
0.0001
0.67
1
1
0.54
0.69
0.0013
0.89
0.003
0.021


3661099


nb: 3169011
0.81
0.0171
0.0325
0.0085
0.83
0.71
0.88
0.63
0.47
0.0092
0.8
0.013
0.022


3031661


nb: 3562041
0.82
0.0141
0.0684
0.0084
0.78
0.71
0.88
0.56
0.5
0.0379
0.8
0.037
0.022


3840609


nb: 3169011
0.83
0.0094
0.0048
0.0058
0.72
1
1
0.58
0.56
0.0119
0.82
0.043
0.022


2624519


svm: 3169011
0.81
0.0171
0.0325
0.0076
0.83
0.71
0.88
0.63
−0.12
0.0092
0.81
0.011
0.022


3031661


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


2553581


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


3562041


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


3661099


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


3889625


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


3151480


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


3872197


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


3719123


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


3498523


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


3969511


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


3962268


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


3831128


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


2624519


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


3212761


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


3501555


rpart: 3169011
0.79
0.0113
0.0679
0.0072
0.72
0.86
0.93
0.55
0.48
0.0038
0.79
0.008
0.022


2600700


knn: 3169011
0.87
0.0044
0.0744
0.0013
0.5
1
1
0.44
0.61
0.0153
0.87
0.016
0.022


3551833


rf: 3169011
0.84
0.01
0.0104
0.0085
0.72
0.71
0.87
0.5
0.45
0.0266
0.84
0.011
0.023


3962268


rf: 3169011
0.92
0.0005
0.003
0.0003
0.61
1
1
0.5
0.62
0
0.91
0.001
0.023


3562041


rf: 3169011
0.82
0.0141
0.0431
0.0071
0.72
0.86
0.93
0.55
0.61
0.0038
0.83
0.008
0.023


3498523


rf: 3169011
0.85
0.0061
0.0018
0.0041
0.56
1
1
0.47
0.64
0.0117
0.84
0.019
0.023


2624519


rf: 3562041
0.77
0.0426
0.0744
0.0055
0.78
0.71
0.88
0.56
0.61
0.0333
0.76
0.045
0.023


3661099


nb: 3840609
0.83
0.0116
0.0431
0.0068
0.78
0.71
0.88
0.56
0.53
0.0262
0.84
0.031
0.023


3551833


rf: 3169011
0.83
0.012
0.0227
0.0062
0.72
0.86
0.93
0.55
0.46
0.0038
0.82
0.006
0.023


3719123


rf: 3169011
0.85
0.0084
0.0045
0.0051
0.67
1
1
0.54
0.51
0.0005
0.83
0.019
0.024


2600700


rf: 3169011
0.79
0.0316
0.0464
0.0104
0.56
1
1
0.47
0.71
0.0084
0.81
0.014
0.026


3031661


svm: 3889144
0.87
0.0039
0.0006
0.0023
0.72
1
1
0.58
−0.13
0.0207
0.87
0.034
0.026


3661099


nb: 3169011
0.81
0.0171
0.0083
0.0081
0.61
0.86
0.92
0.46
0.58
0.0037
0.82
0.006
0.026


2397069


rf: 3169011
0.9
0.0025
0.0018
0.0023
0.5
1
1
0.44
0.66
0.0022
0.89
0.003
0.026


2553581


svm: 3169011
0.9
0.001
0.0048
0.0007
0.67
1
1
0.54
0.18
0.0004
0.9
0.003
0.027


3212761


rpart: 3562436
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


3562041


rpart: 2553581
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


3562041


rpart: 3562041
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


3661099


rpart: 3562041
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


3551833


rpart: 3562041
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


3151480


rpart: 3562041
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


3872197


rpart: 3562041
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


2553585


rpart: 3562041
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


3719123


rpart: 3562041
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


3498523


rpart: 3562041
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


3962268


rpart: 3562041
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


3831128


rpart: 3562041
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


3666869


rpart: 3562041
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


2624519


rpart: 3562041
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


3212761


rpart: 3562041
0.73
0.0198
0.2359
0.0142
0.89
0.57
0.84
0.67
0.46
0.0167
0.73
0.03
0.027


3501555


svm: 3169011
0.83
0.0094
0.0118
0.0121
0.67
1
1
0.54
0.2
0.0004
0.83
0.006
0.028


3831128


svm: 3169011
0.86
0.0049
0.0083
0.0043
0.61
0.86
0.92
0.46
0.5
0.0037
0.85
0.004
0.03


2397069


svm: 2397069
0.8
0.0205
0.0563
0.004
0.44
1
1
0.41
0.61
0.0262
0.81
0.032
0.03


3212761


nb: 3562041
0.81
0.0171
0.0264
0.0125
0.67
0.86
0.92
0.5
0.56
0.0405
0.82
0.038
0.03


3661099


knn: 3169011
0.86
0.0056
0.0104
0.0044
0.56
1
1
0.47
0.64
0.0215
0.86
0.003
0.03


3212761


nb: 3889144
0.87
0.0039
0.0006
0.0072
0.78
1
1
0.64
0.52
0.0066
0.87
0.047
0.031


3661099


knn: 2553581
0.78
0.0318
0.0973
0.0159
0.89
0.57
0.84
0.67
0.39
0.026
0.79
0.033
0.031


3562041


rpart: 3169011
0.79
0.0147
0.0679
0.0126
0.67
0.86
0.92
0.5
0.62
0.0109
0.79
0.014
0.032


3562436


svm: 3562041
0.79
0.0245
0.0325
0.0225
0.78
0.71
0.88
0.56
−0.26
0.0288
0.8
0.031
0.033


3872197


nb: 3661099
0.86
0.0049
0.0202
0.0127
0.5
1
1
0.44
0.59
0.0427
0.84
0.02
0.033


3031661


knn: 3169011
0.78
0.0337
0.0511
0.0187
0.89
0.71
0.89
0.71
0.5
0.0107
0.78
0.026
0.034


2397069


rf: 3169011
0.88
0.0044
0.0045
0.0012
0.67
1
1
0.54
0.56
0.0014
0.86
0.004
0.038


2553585


knn: 3169011
0.83
0.0137
0.0104
0.0166
0.72
1
1
0.58
0.5
0.0016
0.82
0.027
0.04


3889144


rf: 3169011
0.82
0.0141
0.0048
0.0241
0.67
1
1
0.54
0.67
0.0008
0.81
0.025
0.041


3562436


svm: 2397069
0.82
0.0141
0.0563
0.007
0.5
1
1
0.44
0.24
0.0451
0.8
0.032
0.043


3969511


rpart: 3889144
0.85
0.0061
0.0227
0.0023
0.67
1
1
0.54
0.5
0.018
0.85
0.028
0.045


3889625


knn: 3889144
0.77
0.0363
0.2191
0.0301
0.61
0.86
0.92
0.46
0.5
0.0458
0.77
0.025
0.048


2397069









Performance across multiple metrics of pairwise combinations of markers selected from the library (Table 16, Table 18) in the subset of patients with positive lymph node involvement.

Claims
  • 1. A method of diagnosing, prognosing, determining progression of cancer, predicting a therapeutic regimen or predicting benefit from therapy in a subject having cancer, comprising: (a) assaying an expression level in a sample from the subject for a plurality of targets, wherein the plurality of targets comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; and(b) diagnosing, prognosing, determining progression of cancer, predicting a therapeutic regimen or predicting benefit from therapy in a subject having cancer based on the expression levels of the plurality of targets.
  • 2. The method of claim 1, wherein the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas.
  • 3. The method of claim 1, wherein the cancer is a bladder cancer.
  • 4. The method of claim 1, wherein the plurality of targets comprises a coding target.
  • 5. The method of claim 4, wherein the coding target is an exonic sequence.
  • 6. The method of claim 1, wherein the plurality of targets comprises a non-coding target.
  • 7. The method of claim 6, wherein the non-coding target comprises an intronic sequence or partially overlaps an intronic sequence.
  • 8. The method of claim 6, wherein the non-coding target comprises a sequence within the UTR or partially overlaps with a UTR sequence.
  • 9. The method of any claim 1, wherein the target comprises a nucleic acid sequence.
  • 10. The method of claim 9, wherein the nucleic acid sequence is a DNA sequence.
  • 11. The method of claim 9, wherein the nucleic acid sequence is an RNA sequence.
  • 12. The method of claim 1, wherein the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 13. The method of claim 1, wherein the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 14. The method of claim 1, wherein the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 15. The method of claim 1, wherein the plurality of targets comprises SEQ ID NOs: 1-15.
  • 16. The method of claim 1, wherein the diagnosing, prognosing, determining progression of cancer, predicting therapeutic regimen or predicting benefit from therapy includes assessing the risk of cancer recurrence.
  • 17. The method of claim 1, further comprising sequencing the plurality of targets.
  • 18. The method of claim 1, further comprising hybridizing the plurality of targets to a solid support.
  • 19. The method of claim 18, wherein the solid support is a bead or array.
  • 20. A probe set for assessing a cancer status of a subject comprising a plurality of probes, wherein the probes in the set are capable of detecting an expression level of one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440, wherein the expression level determines the cancer status of the subject with at least 40% specificity.
  • 21. The probe set of claim 20, wherein the one or more targets comprises SEQ ID NOs: 1-15.
  • 22. The probe set of claim 20, wherein the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas.
  • 23. The probe set of claim 20, wherein the cancer is a bladder cancer.
  • 24. The probe set of claim 20, wherein the probe set further comprises a probe capable of detecting an expression level of at least one coding target.
  • 25. The probe set of claim 24, wherein the coding target is an exonic sequence.
  • 26. The probe set of claim 20, wherein the probe set further comprises a probe capable of detecting an expression level of at least one non-coding target.
  • 27. The probe set of claim 26, wherein the non-coding target is an intronic sequence or partially overlaps with an intronic sequence.
  • 28. The probe set of claim 26, wherein the non-coding target is a UTR sequence or partially overlaps with a UTR sequence.
  • 29. The probe set of claim 20, wherein assessing the cancer status includes assessing cancer recurrence risk.
  • 30. The probe set of claim 20, wherein the target is a nucleic acid sequence.
  • 31. The probe set of claim 30, wherein the nucleic acid sequence is a DNA sequence.
  • 32. The probe set of claim 30, wherein the nucleic acid sequence is an RNA sequence.
  • 33. The probe set of claim 20, wherein the probes are between about 15 nucleotides and about 500 nucleotides in length.
  • 34. The probe set of claim 20, wherein the probes are at least 15 nucleotides in length.
  • 35. The probe set of claim 20, wherein the probes are at least 25 nucleotides in length.
  • 36. The probe set of claim 20, wherein the non-coding target is a non-coding RNA transcript and the non-coding RNA transcript is non-polyadenylated.
  • 37. A system for analyzing a cancer, comprising: (a) a probe set comprising a plurality of target sequences, wherein (i) the plurality of target sequences hybridizes to one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; or(ii) the plurality of target sequences comprises one or more target sequences selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; and(b) a computer model or algorithm for analyzing an expression level and/or expression profile of the target hybridized to the probe in a sample from a subject suffering from a cancer.
  • 38. The system of claim 37, wherein the plurality of target sequences comprises SEQ ID NOs: 1-15
  • 39. The system of claim 37, further comprising a label that specifically binds to the target, the probe, or a combination thereof.
  • 40. The system of claim 37, wherein the plurality of target sequences comprises at least 5 target sequences selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 41. The system of claim 37, wherein the plurality of target sequences comprises at least 10 target sequences selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 42. The system of claim 37, wherein the plurality of target sequences comprises at least 15 target sequences selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 43. The system of claim 37, wherein the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas.
  • 44. A method of analyzing a cancer in an individual in need thereof, comprising: (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440; and(b) comparing the expression profile from the sample to an expression profile of a control or standard.
  • 45. The method of claim 44, wherein the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 46. The method of claim 44, wherein the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 47. The method of claim 44, wherein the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 48. The method of claim 44, wherein the plurality of targets comprises SEQ ID NOs: 1-15.
  • 49. The method of claim 44, wherein the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas.
  • 50. The method of claim 44, further comprising providing diagnostic or prognostic information to the individual about the cancer based on the comparison.
  • 51. The method of claim 44, further comprising diagnosing the individual with a cancer if the expression profile of the sample (a) deviates from the control or standard from a healthy individual or population of healthy individuals, or (b) matches the control or standard from an individual or population of individuals who have or have had the cancer.
  • 52. The method of claim 44, further comprising predicting the susceptibility of the individual for developing a cancer based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer.
  • 53. The method of claim 44, further comprising prescribing a treatment regimen based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer.
  • 54. The method of claim 44, further comprising altering a treatment regimen prescribed or administered to the individual based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer.
  • 55. The method of claim 44, further comprising predicting the individual's response to a treatment regimen based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer.
  • 56. The method of claim 55, wherein the deviation is the expression level of one or more targets from the sample is greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals.
  • 57. The method of claim 55, wherein the deviation is the expression level of one or more targets from the sample is at least about 30% greater than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals.
  • 58. The method of claim 55, wherein the deviation is the expression level of one or more targets from the sample is less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals.
  • 59. The method of claim 55, wherein the deviation is the expression level of one or more targets from the sample is at least about 30% less than the expression level of one or more targets from a control or standard derived from a healthy individual or population of healthy individuals.
  • 60. The method of claim 44, further comprising using a machine to isolate the target or the probe from the sample.
  • 61. The method of claim 44, further comprising contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof.
  • 62. The method of claim 44, further comprising amplifying the target, the probe, or any combination thereof.
  • 63. The method of claim 44, further comprising sequencing the target, the probe, or any combination thereof.
  • 64. A method of diagnosing cancer in an individual in need thereof, comprising: (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440;(b) comparing the expression profile from the sample to an expression profile of a control or standard; and(c) diagnosing a cancer in the individual if the expression profile of the sample (i) deviates from the control or standard from a healthy individual or population of healthy individuals, or (ii) matches the control or standard from an individual or population of individuals who have or have had the cancer.
  • 65. The method of claim 64, wherein the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 66. The method of claim 64, wherein the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 67. The method of claim 64, wherein the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 68. The method of claim 64, wherein the plurality of targets comprises SEQ ID NOs: 1-15
  • 69. The method of claim 64, wherein the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas.
  • 70. The method of claim 64, further comprising a software module executed by a computer-processing device to compare the expression profiles.
  • 71. The method of claim 64, further comprising using a machine to isolate the target or the probe from the sample.
  • 72. The method of claim 64, further comprising contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof.
  • 73. The method of claim 64, further comprising amplifying the target, the probe, or any combination thereof.
  • 74. The method of claim 64, further comprising sequencing the target, the probe, or any combination thereof.
  • 75. A method of predicting whether an individual is susceptible to developing a cancer, comprising: (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440;(b) comparing the expression profile from the sample to an expression profile of a control or standard; and(c) predicting the susceptibility of the individual for developing a cancer based on (i) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (ii) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer.
  • 76. The method of claim 75, wherein the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 77. The method of claim 75, wherein the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 78. The method of claim 75, wherein the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 79. The method of claim 75, wherein the plurality of targets comprises SEQ ID NOs:1-15.
  • 80. The method of claim 75, wherein the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas.
  • 81. The method of claim 75, further comprising a software module executed by a computer-processing device to compare the expression profiles.
  • 82. The method of claim 75, further comprising using a machine to isolate the target or the probe from the sample.
  • 83. The method of claim 75, further comprising contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof.
  • 84. The method of claim 75, further comprising amplifying the target, the probe, or any combination thereof.
  • 85. The method of claim 75, further comprising sequencing the target, the probe, or any combination thereof.
  • 86. A method of predicting an individual's response to a treatment regimen for a cancer, comprising: (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440;(b) comparing the expression profile from the sample to an expression profile of a control or standard; and(c) predicting the individual's response to a treatment regimen based on (a) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (b) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer.
  • 87. The method of claim 86, wherein the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 88. The method of claim 86, wherein the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 89. The method of claim 86, wherein the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 90. The method of claim 86, wherein the plurality of targets comprises SEQ ID NOs:1-15.
  • 91. The method of claim 86, wherein the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas.
  • 92. The method of claim 86, further comprising a software module executed by a computer-processing device to compare the expression profiles.
  • 93. The method of claim 86, further comprising using a machine to isolate the target or the probe from the sample.
  • 94. The method of claim 86, further comprising contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof.
  • 95. The method of claim 86, further comprising amplifying the target, the probe, or any combination thereof.
  • 96. The method of claim 86, further comprising sequencing the target, the probe, or any combination thereof.
  • 97. A method of prescribing a treatment regimen for a cancer to an individual in need thereof, comprising: (a) obtaining an expression profile from a sample obtained from the individual, wherein the expression profile comprises one or more targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440;(b) comparing the expression profile from the sample to an expression profile of a control or standard; and(c) prescribing a treatment regimen based on (i) the deviation of the expression profile of the sample from a control or standard derived from a healthy individual or population of healthy individuals, or (ii) the similarity of the expression profiles of the sample and a control or standard derived from an individual or population of individuals who have or have had the cancer.
  • 98. The method of claim 97, wherein the plurality of targets comprises at least 5 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 99. The method of claim 97, wherein the plurality of targets comprises at least 10 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 100. The method of claim 97, wherein the plurality of targets comprises at least 15 targets selected from Table 2B, Table 16 or SEQ ID NOs:1-1440.
  • 101. The method of claim 97, wherein the plurality of targets comprises SEQ ID NOs:1-15.
  • 102. The method of claim 97, wherein the cancer is selected from the group consisting of bladder cancer, skin cancer, lung cancer, colon cancer, pancreatic cancer, prostate cancer, liver cancer, thyroid cancer, ovarian cancer, uterine cancer, breast cancer, cervical cancer, kidney cancer, epithelial carcinoma, squamous carcinoma, basal cell carcinoma, melanoma, papilloma, and adenomas.
  • 103. The method of claim 97, further comprising a software module executed by a computer-processing device to compare the expression profiles.
  • 104. The method of claim 97, further comprising using a machine to isolate the target or the probe from the sample.
  • 105. The method of claim 97, further comprising contacting the sample with a label that specifically binds to the target, the probe, or a combination thereof.
  • 106. The method of claim 97, further comprising amplifying the target, the probe, or any combination thereof.
  • 107. The method of claim 97, further comprising sequencing the target, the probe, or any combination thereof.
  • 108. The method of claim 97, further comprising converting the expression levels of the target sequences into a likelihood score that indicates the probability that a biological sample is from a patient who will exhibit no evidence of disease, who will exhibit systemic cancer, or who will exhibit cancer recurrence.
  • 109. The method of claim 97, wherein the target sequences are differentially expressed the cancer.
  • 110. The method of claim 109, wherein the differential expression is dependent on aggressiveness.
  • 111. The method of claim 97, wherein the expression profile is determined by a method selected from the group consisting of RT-PCR, Northern blotting, ligase chain reaction, array hybridization, and a combination thereof.
  • 112. A kit for analyzing a cancer, comprising: (a) a probe set comprising a plurality of target sequences, wherein the plurality of target sequences comprises at least one target sequence listed in Table 2B, Table 16 or SEQ ID NOs:1-1440; and(b) a computer model or algorithm for analyzing an expression level and/or expression profile of the target sequences in a sample.
  • 113. The kit of claim 112, further comprising a computer model or algorithm for correlating the expression level or expression profile with disease state or outcome.
  • 114. The kit of claim 112, further comprising a computer model or algorithm for designating a treatment modality for the individual.
  • 115. The kit of claim 112, further comprising a computer model or algorithm for normalizing expression level or expression profile of the target sequences.
  • 116. The kit of claim 112, further comprising a computer model or algorithm comprising a robust multichip average (RMA), frozen robust multichip average (fRMA), Single Channel Array Normalization (SCAN), ComBat (Combining Batches of gene expression), probe logarithmic intensity error estimation (PLIER), non-linear fit (NLFIT) quantile-based, nonlinear normalization, or a combination thereof.
  • 117. The kit of claim 112, wherein the cancer is a bladder cancer.
  • 118. The kit of claim 112, wherein the plurality of targets comprises SEQ ID NOs:1-15.
RELATED APPLICATIONS

This application claims priority to U.S. Provisional Patent Application Ser. No. 61/899,648, filed on Nov. 4, 2013, which is hereby incorporated by reference herein in its entirety.

PCT Information
Filing Document Filing Date Country Kind
PCT/CA2014/000787 11/4/2014 WO 00
Provisional Applications (1)
Number Date Country
61899648 Nov 2013 US