Patent Application
20110059043
The present invention relates to a series of benzodiazepine derivatives and, in particular, it relates to a series of benzodiazepine derivatives which are inhibitors of the hepatitis C virus (HCV) Polymerase enzyme and are therefore active against HCV infection. This invention also relates to methods for the preparation of such benzodiazepine derivatives and novel intermediates in the preparation thereof, to pharmaceutical compositions containing such benzodiazepine derivatives, to the use of such benzodiazepine derivatives in the preparation of medicines and to the use of such benzodiazepine derivatives in the treatment of HCV infection.
Hepatitis C virus is a member of the Flaviviridae family of viruses and HCV infection is the leading cause of chronic liver disease worldwide. An estimated 170 million people are infected with HCV worldwide. Following the initial acute infection, a majority of infected individuals develop chronic hepatitis, which can progress to liver fibrosis, cirrhosis, end-stage liver disease and hepatocellular carcinoma. Liver cirrhosis due to HCV infection is the principal cause of liver transplantation.
There are six major HCV genotypes and more than 50 subtypes, with HCV type 1 being the predominant genotype in the US and Europe. HCV has a positive-sense, single-stranded RNA genome that encodes a single polyproptein which undergoes posttranslational cleavage to provide ten viral proteins, including viral structural proteins (envelope glycoproteins E1 and E2, and the core nucleocapsid protein), non-structural proteins (helicase, polymerase and protease) and other proteins of unknown function. Replication of the viral genome is mediated by the RNA-dependent RNA polymerase.
The current standard of care for HCV infection is treatment with interferon-alpha in combination with ribavirin. However, such therapy is only partially effective and may cause significant, undesirable side effects.
An alternative strategy for the treatment of HCV infection is the targeting of HCV polymerase with small molecular weight inhibitors. For example, WO 07/034127 discloses a series of benzodiazepine derivatives that are inhibitors of the HCV polymerase. Nonetheless, there is still a requirement for alternative HCV polymerase inhibitors which differ by virtue of their chemical structure and may have superior potency against HCV Polymerase and/or advantageous physical properties and/or favourable toxicity profiles and/or favourable metabolic profiles in comparison with other known HCV Polymerase inhibitors.
A further series of HCV Polymerase inhibitors is described herein. According to a first aspect of the present invention there is therefore provided a compound of Formula (I), or a pharmaceutically acceptable salt thereof:
According to another aspect of the present invention there is therefore provided a compound of Formula (I), or a pharmaceutically acceptable salt thereof, wherein:
R2 represents hydrogen, halo, C1-3 alkyl, C1-3alkoxy, formyl, C2-3 alkanoyl, trifluoromethyl or trifluoromethoxy;
The term “halo” is used herein to denote fluoro, chloro, bromo and iodo.
The term “C1-6alkyl” is intended to mean a monovalent saturated carbon chain radical of 1 to 6 carbon atoms in length which may be straight-chained or branched. However, references to individual alkyl groups such as “propyl” are specific for the straight chain version only and references to individual branched-chain alkyl groups such as tert-butyl are specific for the branched chain version only. For example, “C1-6alkyl” includes, but is not limited to, methyl, ethyl, propyl, isopropyl, butyl, tert-butyl, pentyl, tent-pentyl, hexyl and isohexyl. The term “C1-3alkyl” is to be construed accordingly.
The term “C1-6alkylene” is intended to mean a divalent saturated carbon chain radical of 1 to 6 carbon atoms in length which may be straight-chained or branched. For example, “C1-6alkylene” includes, but is not limited to, methylene, ethylene, 2,2-dimethyl-ethylene, propylene, 2-methylpropylene, butylene and pentylene.
The term “C1-3 alkoxy” is intended to mean a saturated carbon chain of 1 to 3 carbon atoms in length, which may be straight-chained or branched, linked to oxygen. For example, “C1-3 alkoxy” includes methoxy, ethoxy, propoxy and isopropoxy.
The term “C1-6alkoxyC1-6alkyl” is intended to mean a saturated carbon chain of 1 to 6 carbon atoms in length, which may be straight-chained or branched, linked via oxygen to another saturated carbon chain of 1 to 6 carbon atoms in length, which may be straight-chained or branched. For example, “C1-6alkoxyC1-6alkyl” includes, but is not limited to, methoxyethyl, methoxypropyl, ethoxypropyl, propoxyethyl and butoxypropyl.
The term “diC1-3alkylaminoC1-6alkyl” is intended to mean a tertiary amino group which is substituted by two alkyl groups of 1 to 3 carbon atoms in length, wherein said alkyl groups may be straight-chained or branched, and which is linked to a saturated carbon chain of 1 to 6 carbon atoms in length which may also be straight-chained or branched. For example, “di-C1-3alkylaminoC1-6alkyl” includes, but is not limited to, dimethylaminoethyl, dimethylaminomethyl, diethylaminoethyl, dipropylaminoethyl and dimethylaminopropyl.
The term “C1-3alkylaminoC1-6alkyl” is intended to mean a secondary amino group which is substituted by one alkyl group of 1 to 3 carbon atoms in length, wherein said alkyl group may be straight-chained or branched, and which is linked to a saturated carbon chain of 1 to 6 carbon atoms in length which may also be straight-chained or branched. For example, “C1-3alkylaminoC1-6alkyl” includes, but is not limited to, methylaminoethyl, methylaminomethyl, ethylaminoethyl, propylaminoethyl and methylaminopropyl.
The term “C2-4alkanoyl” is intended to mean a saturated carbon chain of 1 to 3 carbon atoms in length, which may be straight-chained or branched, linked to carbonyl. For example, “C2-4alkanoyl” includes acetyl, propanoyl, butanoyl and 2-methylpropanoyl. The term “C2—3alkanoyl” is to be construed accordingly.
The term “C1-4alkylsulfonyl” is intended to mean a saturated carbon chain of 1 to 4 carbon atoms in length, which may be straight-chained or branched, linked to sulfur doioxide. For example, “C1-4alkylsulfonyl” includes, but is not limited to, methylsulfonyl, ethylsulfonyl, propylsulfonyl, isopropylsulfonyl, butylsulfonyl, isobutylsulfonyl and tert-butylsulfonyl.
The term “C1-4alkylaminocarbonyl” is intended to mean a saturated carbon chain of 1 to 4 carbon atoms in length, which may be straight-chained or branched, linked to a secondary amino group which is in turn linked to a carbonyl group. For example, “C1-4alkylaminocarbonyl” includes, but is not limited to, methylaminocarbonyl, ethylaminocarbonyl, propylaminocarbonyl and butylaminocarbonyl.
The term “diC1-4alkylaminocarbonyl” is intended to mean two saturated carbon chains of 1 to 4 carbon atoms in length, which may be straight-chained or branched, each linked to a tertiary amino group which is in turn linked to a carbonyl group. For example, “diC1-4alkylaminocarbonyl” includes, but is not limited to, dimethylaminocarbonyl, diethylaminocarbonyl, dipropylaminocarbonyl and dibutylaminocarbonyl.
The term “haloC1-3alkyl” is intended to mean a saturated carbon chain of 1 to 3 carbon atoms in length, which may be straight-chained or branched, wherein at least one of is the hydrogen atoms has been replaced by a halo atom. For example, “haloC1-3alkyl” includes, but is not limited to, difluoromethyl, trifluoromethyl, chloro(difluoro)methyl, difluoroethyl and difluoropropyl.
The term “haloC 1-3alkoxy” is intended to mean a saturated carbon chain of 1 to 3 carbon atoms in length, which may be straight-chained or branched, wherein at least one of the hydrogen atoms has been replaced by a halo atom, linked to oxygen. For example, “haloC1-3alkoxy” includes, but is not limited to, difluoromethoxy, trifluoromethoxy, chloro(difluoro)methoxy, difluoroethoxy and difluoropropoxy.
The term “C3-6cycloalkylC 1-3alkyl” is intended to mean a saturated 3 to 6 membered monocyclic carbon ring linked to a saturated carbon chain of 1 to 3 carbon atoms in length which may be straight-chained or branched. For example “C3-6cycloalkyllC1-3alkyl” includes, but is not limited to, cyclopropylmethyl, cyclobutylethyl, cyclopentylpropyl and cyclohexylethyl.
The term “aryl” is intended to mean phenyl or naphthyl.
Unless stated otherwise, the term “monocyclic heteroaryl ring” is intended to mean a 5 or 6 membered, totally unsaturated and/or aromatic monocyclic ring which comprises 1, 2, 3 or 4 heteroatoms independently selected from nitrogen, oxygen or sulfur, linked via ring carbon atoms or ring nitrogen atoms where a bond from a nitrogen is possible, for example no bond is possible to the nitrogen of a pyridine ring, but a bond is possible through the 1-nitrogen of a pyrazole ring. Examples of 5 or 6 membered heteroaryl rings include, but are not limited to, pyrrolyl, furanyl, imidazolyl, triazolyl, tetrazolyl, pyrazinyl, pyrazolyl, pyrimidinyl, pyridazinyl, pyridinyl, pyrrolyl, isoxazolyl, oxazolyl, 1,2,4 oxadiazolyl, isothiazolyl, thiazolyl, thiadiazolyl, 1,2,4-triazolyl and thiophenyl.
Unless stated otherwise, the term “heterocyclic ring” is intended to mean a 4, 5, 6 or 7 membered fully saturated or partially saturated monocyclic ring which comprises 1, 2 or 3 heteroatoms selected from nitrogen, oxygen or sulfur linked via ring carbon atoms or ring nitrogen atoms. Examples of 4, 5, 6 or 7 membered heterocyclic rings include, but are not limited to, azetidinyl, tetrahydrofuranyl, dihydropyranyl, tetrahydropyranyl, pyrrolinyl, pyrrolidinyl, thiazolidinyl, morpholinyl, oxetanyl, piperidinyl, piperazinyl, dihydropyridinyl, dihydropyrimidinyl and azepanyl.
It is to be understood that, insofar as compounds of Formula (I) defined above exist in optically active or racemic forms by virtue of the asymmetric carbon atom, the invention includes in its definition any such optically active or racemic form which possesses the property of HCV Polymerase inhibitory activity. The synthesis of optically active forms may be carried out by standard techniques of organic chemistry well known in the art, for example by synthesis from optically active starting materials or by resolution of a racemic form. Racemic compounds and racemic intermediates thereof are drawn herein as flat structures whereas stereospecific compounds and stereospecific intermediates thereof are drawn with the appropriate stereochemistry indicated.
In one embodiment of the invention, the compound of Formula (I) has the configuration shown in Formula (IA):
wherein L1, L2, L3, W, X, R1, R2, R3, R4R5, R6 and R7 are as defined hereinbefore.
In one embodiment of the invention, the compound of Formula (I) has the configuration shown in Formula (IB):
wherein L1, L2, L3, W, X, R1, R2, R3, R4R5, R6 and R7 are as defined hereinbefore.
Reference herein to a compound of Formula (I) should be understood to refer equally to a compound of Formula (I), (IA) or (IB).
It is to be understood that certain compounds of Formula (I) above may exist in unsolvated forms as well as solvated forms, such as, for example, hydrated forms. It is to be understood that the present invention encompasses all such solvated forms that possess HCV Polymerase inhibitory activity.
It is also to be understood that certain compounds of Formula (I) may exist in crystalline form and exhibit polymorphism. The present invention encompasses all such polymorphic forms which possess HCV Polymerase inhibitory activity.
In further embodiments of the first aspect of the present invention, each of the following definitions of L1, L2, L3, W, X, R1, R2, R3, R4R5, R6, R7, R8 and R9 in paragraphs (1) to (35) hereinafter may be used individually or in combination with one or more of the other following definitions to limit the broadest definitions of Formulas (I), (IA) or (IB). For example, a skilled person would understand that paragraphs (1), (4), (5) and (9) could be combined to provide a compound of Formula (I), or a pharmaceutically acceptable salt thereof, wherein L1 represents O, L2 represents ethylene, L3 represents O is and W represents C1-6alkyl. Similarly, paragraphs (16), (19), (22), (25), (26), (27), (29) and (31) could be combined to provide a compound of Formula (I), or a pharmaceutically acceptable salt thereof, wherein R1 represents hydrogen, R2 represents fluoro, R3 represents hydrogen, R4 represents chloro, methoxy or ethoxy, R5 represents hydrogen and R6 represents chloro. Likewise, paragraphs (1), (4), (5), (9), (16), (19), (22), (25), (26), (27), (29) and (31) could be combined. Likewise, paragraphs (16), (40), (41), (42), (29), (43), (32), (36), (3), (37), (38) and (14) could be combined. Likewise, paragraphs (16), (40), (41), (42), (29), (43), (32), (36), (3), (37), (39) and (14) could be combined. Likewise, paragraphs (16), (40), (41), (42), (29), (43), (32), (36), (3), (37), (38) and (15) could be combined. Likewise, paragraphs (16), (40), (41), (42), (29), (43), (32), (36), (3), (37), (39) and (15) could be combined.
Particular novel compounds of Formula (I) include, but are not limited to, the following compounds:
2-(Ethyl(2-methoxyethyl)amino)-5-fluoro-N-(2-oxo-5-(2,4,6-trichlorophenyl)-2,3-dihydro-1H-benzo[e][1,4]diazepin-3-yl)nicotinamide;
A particular novel compound of Formula (I) is (5-Fluoro-2-(2-methoxyethoxy)-N-(2-oxo-5-(2,4,6-trichlorophenyl)-2,3-dihydro-1H-benzo[e][1,4]diazepin-3-yl)nicotinamide and pharmaceutically acceptable salts thereof
A particular novel compound of Formula (I) is (S)-5-Fluoro-2-(2-methoxyethoxy)-N-(2-oxo-5-(2,4,6-trichlorophenyl)-2,3-dihydro-1H-benzo[e][1,4]diazepin-3-yl)nicotinamide and pharmaceutically acceptable salts thereof
A suitable pharmaceutically acceptable salt of a compound of Formula (I) is, for example, where the compound is sufficiently basic, an acid addition salt such as a hydrochloride, hydrobromide, phosphate, acetate, fumarate, maleate, tartrate, citrate, oxalate, methanesulfonate or p-toluenesulfonate salt. There may be more than one anion depending on the number of charged functions and the valency of the anions. Other is pharmaceutically acceptable salts, as well as pro-drugs such as pharmaceutically acceptable esters and pharmaceutically acceptable amides may be prepared using conventional methods.
For example, the compounds of the invention may be administered in the form of a pro-drug, that is a compound that is broken down in the human or animal body to release a compound of the invention. A pro-drug may be used to alter the physical properties and/or the pharmacokinetic properties of a compound of the invention. A pro-drug can be formed when the compound of the invention contains a suitable group or substituent to which a property-modifying group can be attached. Examples of pro-drugs include in vivo cleavable amide derivatives that may be formed at an amino group in a compound of Formula (I).
Accordingly, the present invention includes those compounds of Formula (I) as defined hereinbefore when made available by organic synthesis and when made available within the human or animal body by way of cleavage of a pro-drug thereof Accordingly, the present invention includes those compounds of Formula (I) that are produced by organic synthetic means and also such compounds that are produced in the human or animal body by way of metabolism of a precursor compound, that is a compound of Formula (I) may be a synthetically-produced compound or a metabolically-produced compound.
A suitable pharmaceutically acceptable pro-drug of a compound of Formula (I) is one that is based on reasonable medical judgement as being suitable for administration to the human or animal body without undesirable pharmacological activities and without undue toxicity.
Various forms of pro-drug have been described, for example in the following documents:
A suitable pharmaceutically acceptable pro-drug of a compound of Formula (I) that possesses an amino group is, for example, an in vivo cleavable amide derivative thereof. Suitable pharmaceutically acceptable amides from an amino group include, for example an amide formed with C2-10 alkanoyl groups such as an acetyl, benzoyl, phenylacetyl and substituted benzoyl and phenylacetyl groups. Examples of ring substituents on the phenylacetyl and benzoyl groups include aminomethyl, N-alkylaminomethyl, N,N-dialkylaminomethyl, morpholinomethyl, piperazin-1-ylmethyl and 4-(C1-4 alkyl)piperazin-1-ylmethyl.
The in vivo effects of a compound of Formula (I) may be exerted in part by one or more metabolites that are formed within the human or animal body after administration of a compound of Formula (I). As stated hereinbefore, the in vivo effects of a compound of Formula (I) may also be exerted by way of metabolism of a precursor compound (a pro-drug).
Certain processes for the synthesis of compounds of Formula (I) are provided as a s further feature of the invention. Thus, according to a further aspect of the invention there is provided a process for the preparation of a compound of Formula (I), or a pharmaceutically acceptable salt thereof, which comprises a process (a), (b) or (c) wherein, unless otherwise defined, the variables are as defined hereinbefore for compounds of Formula (I):
and thereafter, if necessary:
Intermediate compounds may be prepared by suitable procedures, for example as known in the art by skilled persons. For example, compounds of Formulae (II) and (IV) may be prepared as follows:
and thereafter removing the protecting groups.
and thereafter removing the P2 protecting group.
Specific reaction conditions for processes (a), (b), (c), (d) and (e) above are as follows:
A process for the preparation of compounds of Formula (I) may comprise converting a compound of Formula (I) into another compound of Formula (I) using standard chemical reactions well-known to those skilled in the art to produce another compound of the invention. Chemical conversions of this type are well known to those skilled in the art and may include functional group interconversions such as hydrolysis, hydrogenation, hydrogenolysis, oxidation or reduction, and/or further functionalisation by standard reactions such as amide or metal-catalysed coupling, or nucleophilic displacement reactions. Examples of such conversions are described, for instance, in Comprehensive Organic Chemistry, Volume 2, p 3, D. Barton and D. Ollis Eds, Pergamon, 1979, Comprehensive Functional Group Transformations, A. R. Katritzky, O. Meth-Cohn, and C. W. Rees Eds., Pergamon, 1995, and by various authors in Houben-Weyl, Methods of Organic Chemistry, Verlag Chemie, various years, and references therein.
It will be appreciated by a person skilled in the art that it may be necessary/desirable to protect any sensitive groups in the compounds in some of the is processes/ reactions mentioned herein. The instances where protection is necessary or desirable, and suitable methods for providing such protection are known to those skilled in the art. Conventional protecting groups may be used in accordance with standard practice (for illustration see P. G. M. Wuts and T. W. Green, Protective Groups in Organic Synthesis, 4th Edition, John Wiley and Sons, 2002). Thus, if reactants include groups such as amino, carboxy or hydroxy it may be desirable to protect the group in some of the reactions mentioned herein.
Any protecting groups utilised in the processes described herein may in general be chosen from any of the groups described in the literature or known to the skilled chemist as appropriate for the protection of the group in question and may be introduced by conventional methods. Protecting groups may be removed by any convenient method as described in the literature or known to the skilled chemist as appropriate for the removal of the protecting group in question, such methods being chosen so as to effect removal of the protecting group with minimum disturbance of groups elsewhere in the molecule. The protecting groups may be removed at any convenient stage in the synthesis using conventional techniques well known in the chemical art.
For example, in process (b) described above, a suitable protecting group P1 would be p-methoxybenzyl. Once the reaction described in process (b) is complete, the p-methoxybenzyl can be removed by treating with aluminium trichloride as described in General Method F.
A process for the manufacture of compounds of Formula (I) in the form of a single enantiomer may comprise separating a racemic compound of the invention into separate enantiomers.
Examples of suitable methods for separating the enantiomers of a racemic compound are well known to those skilled in the art and include chromatography using a suitable chiral stationary phase; or conversion of a racemic mixture into diastereomeric derivatives, separation of the mixture of diastereomeric derivatives into two single diastereomers, and regeneration of a separate single enantiomer from each separate single diastereomer; or selective chemical reaction of one of the enantiomers of a racemic compound (kinetic resolution) using a diastereoselective reaction catalysed by a microbiological agent or an enzyme.
Alternatively, compounds of the invention in the form of a single enantiomer may is be prepared by using chiral starting materials to carry out one of the processes described above.
Biological Assays The ability of compounds to inhibit HCV Polymerase activity and replication of an HCV replicon was assessed using the assays described below.
Compounds were tested for inhibition of HCV polymerase using a radiometric [33P]-UTP incorporation assay and a biotinylated U13:PolyA primer:template RNA substrate.
Recombinant HCV polymerase (BK strain) was expressed and purified from E. coli with a 21 amino acid C-terminal deletion and a His6-tag. The general assay buffer consisted of 20 mM Tris (pH 7.5), 25 mM KCl, 5 mM MgCl2, 3 mM DTT, 0.5 mg/ml BSA, 0.01% Tween20. The standard reaction, in 96 well plates, contained 10 μl of diluted compound, 50 μl of substrate and 40 μl of enzyme. Compounds, supplied as 10 mM stocks in DMSO, were diluted initially in neat DMSO, and subsequently buffer was added to give a DMSO concentration of 30%; 10 μl of this was added to the assay plate to give a final concentration in the 100 μl assay of 3% DMSO. The biotinylated U13:PolyA RNA substrate was pre-annealed with 40 μM 5′-biotinylated U13 (Dharmacon) and 213 μg/ml PolyA (Amersham Biosciences) in water incubated at 70° C. for 5 minutes before being cooled on ice. Substrate (50 μl) was added in buffer to give a final concentration in the 100 μl assay of 125 nM biotinylated U13:0.63 μg/ml PolyA and 200 nM UTP with 0.4 μCi [33P]-UTP per well (Perkin Elmer). The reaction was initiated by the addition of 40 μl of enzyme in buffer to give 100 nM final concentration. The reaction was incubated at 25° C. for 100 minutes and then stopped by addition of 100 μl of 100 mM EDTA. The samples were then transferred to 96 well Streptavidin-coated FlashPlates (Perkin Elmer) and incubated at room temperature for ˜1 hour to allow binding to occur. The plates were then washed three times with phosphate-buffered saline containing 0.05% Tween20 in an automated plate washer to remove unincorporated [33P]-UTP, and then counted in a
Each plate included a set of positive controls (no compound, maximum signal) and negative controls (no enzyme, minimum signal) and in each run at least one reference is compound was included to validate the assay. The IC50, concentration required to inhibit the enzyme activity by 50%, was calculated using an 8-point IC50 curve and fitted using the program XLfit (IDBS).
HCV replicon cells Huh 9B (ReBlikon), containing the firefly luciferase—ubiquitin—neomycin phosphotransferase fusion protein and EMCV-IRES driven HCV polyprotein with cell culture adaptive mutations.
Cells were cultured at 37° C. in a 5% CO2 environment and split twice a week on seeding at 2×106 cells/flask on day 1 and 1×106 3 days later. G418 at 0.5 mg/ml was added to the culture medium but not the assay medium. The culture medium consisted of DMEM with 4500 g/l glucose and glutamax (Gibco 61965-026) supplemented with 1×non-essential amino acids (Invitrogen 11140-035), penicillin (100 IU/ml)/streptomycin (100 μg/ml) (Invitrogen 15140-122), FCS (10%, 50 ml) and 1 mg/ml G418 (Invitrogen 10131-027) & 10% Australian foetal calf serum (Invitrogen 10099-141).
A flask of cells was trypsinised and a cell count carried out. Cells were diluted to 100,000 cells/ml and 100 μl of this used to seed one opaque white 96-well plate (for the replicon assay) and one flat-bottomed clear plate (for the tox assay) for every five compounds to be tested for IC50. Wells G12 and H12 were left empty in the clear plate as the blank. Plates were then incubated at 37° C. in a 5% CO2 environment for 24 h.
On the following day compound dilutions are made up in medium at twice their desired final concentration in a clear round bottomed plate. All dilutions have a final DMSO concentration of 1%.
Once the dilution plate had been made up, controls and compounds were transferred to the assay plates (containing the cells) at 100 μl/well in duplicate wells. Exception: no compound was added to wells A1 and A2 of either plate and 100 μl of 1% DMSO was added to these instead. Plates were then incubated at 37° C. with 5% CO2 for 72 h.
At the end of the incubation time, the cells in the white plate were harvested by washing in PBS (100 μL per well) and gently tapping dry before addition of 204 per well of lysis buffer (25 mM tris-phosphate, 8 mM MgCl2, 1 mM DTT, 1% Triton X-100, 15% glycerol. pH to 7.8 using KH2PO4 prior to triton and glycerol addition. Substrate was prepared: 23.5 mM beetle luciferin (Promega E1603), 26 mM ATP (Sigma O-2060) in 100 nM Tris buffer pH 7.8 aliquoted and stored at −80° C. was thawed and diluted 1:50 in luciferase assay buffer (20 mM Tricine (Sigma T-0377), 1.07 mM magnesium carbonate hydroxide (Sigma M-5671), 0.1 mM EDTA (Sigma E-5134), 2.67 mM MgSO4(BDH 101514Y), 33.3 mM dithiothreitol (Sigma 150460) pH 7.8).
The M injector of the microplate luminometer (Lmax, Molecular Devices) was primed with 5×300 μl injections of the diluted substrate. After 5-60 min incubation in lysis buffer at room temperature, a plate was inserted into the luminometer and 100 μl luciferase assay reagent was added by the injector on the luminometer. The signal was measured using a 1 second delay followed by a 4 second measurement programme. The IC50, the concentration of the drug required for reducing the replicon level by 50% in relation to the untreated cell control value, can be calculated from the plot of the percentage reduction of the luciferase activity vs. drug concentration.
The clear plate was stained with 100 μl 0.5% methylene blue in 50% ethanol at room temperature for lh, followed by solvation of the absorbed methylene blue in 100 μl per well of 1% lauroylsarcosine. Absorbance of the plate was measured on a microplate spectrophotometer (Molecular Devices) and the absorbance for each concentration of compound expressed as a proportion of the relative DMSO control. The TD50, the concentration of drug required to reduce the total cell area by 50% relative to the DMSO controls, can be calculated by plotting the absorbance at 620 nm minus background against drug concentration.
When tested in assays (a) and (b) described above, all of the compounds of the Examples gave IC50 values for HCV polymerase inhibitory activity and/or reduction of replicon levels of less than 10 μM (micromolar), indicating that the compounds of the invention are expected to possess useful therapeutic properties. The IC50 and TD50 values so obtained are shown in the following Table:
The compounds of Formula (I) and pharmaceutically acceptable salts thereof may be used on their own but will generally be administered in the form of a pharmaceutical composition in which the Formula (I) compound/salt (active ingredient) is in association with a pharmaceutically acceptable adjuvant, diluent or carrier. Conventional procedures for the selection and preparation of suitable pharmaceutical formulations are described in, for example, “Pharmaceuticals—The Science of Dosage Form Designs”, M. E. Aulton, Churchill Livingstone, 1988.
Depending on the mode of administration, the pharmaceutical composition will preferably comprise from 0.05 to 99% w (per cent by weight), more preferably from 0.05 to 80% w, still more preferably from 0.10 to 70% w, and even more preferably from 0.10 to 50% w, of active ingredient, all percentages by weight being based on total composition.
The present invention also provides a pharmaceutical composition comprising a compound of Formula (I) or a pharmaceutically acceptable salt thereof as hereinbefore defined, in association with a pharmaceutically acceptable adjuvant, diluent or carrier.
The invention further provides a process for the preparation of a pharmaceutical composition of the invention which comprises mixing a compound of Formula (I) or a pharmaceutically acceptable salt thereof as hereinbefore defined with a pharmaceutically acceptable adjuvant, diluent or carrier.
The compounds of the invention may be administered in a variety of dosage forms. Thus, they can be administered orally, for example as tablets, troches, lozenges, aqueous or oily suspensions, dispersible powders or granules. The compounds of the invention may also be administered parenterally, whether subcutaneously, intravenously, intramuscularly, intrasternally, transdermally or by infusion techniques. The compounds may also be administered as suppositories.
The compounds of the invention are typically formulated for administration with a pharmaceutically acceptable carrier or diluent. For example, solid oral forms may contain, together with the active compound, diluents, e.g. lactose, dextrose, saccharose, cellulose, corn starch or potato starch; lubricants, e.g. silica, talc, stearic acid, magnesium or calcium stearate, and/or polyethylene glycols; binding agents; e.g. starches, arabic gums, gelatin, methylcellulose, carboxymethylcellulose or polyvinyl pyrrolidone; disaggregating agents, e.g. starch, alginic acid, alginates or sodium starch glycolate; effervescing mixtures; dyestuffs; sweeteners; wetting agents, such as lecithin, polysorbates, laurylsulfates; and, in general, non toxic and pharmacologically inactive substances used in pharmaceutical formulations. Such pharmaceutical preparations may be manufactured in known manner, for example, by means of mixing, granulating, tableting, sugar coating, or film coating processes.
Liquid dispersions for oral administration may be syrups, emulsions and suspensions. The syrups may contain as carriers, for example, saccharose or saccharose with glycerine and/or mannitol and/or sorbitol.
Suspensions and emulsions may contain as carrier, for example a natural gum, agar, sodium alginate, pectin, methylcellulose, carboxymethylcellulose, or polyvinyl alcohol.
The suspension or solutions for intramuscular injections may contain, together with the active compound, a pharmaceutically acceptable carrier, e.g. sterile water, olive oil, ethyl oleate, glycols, e.g. propylene glycol, and if desired, a suitable amount of lidocaine hydrochloride.
Solutions for injection or infusion may contain as carrier, for example, sterile water or preferably they may be in the form of sterile, aqueous, isotonic saline solutions.
The compound of Formula (I) will normally be administered to a warm-blooded animal at a unit dose within the range 5-5000 mg/m2 body area of the animal, i.e. approximately 0.1-100 mg/kg, and this normally provides a therapeutically-effective dose. A unit dose form such as a tablet or capsule will usually contain, for example 1-250 mg of active ingredient. Preferably a daily dose in the range of 1-50 mg/kg is employed. However the daily dose will necessarily be varied depending upon the host treated, the particular route of administration, and the severity of the illness being treated. Accordingly the optimum dosage may be determined by the practitioner who is treating any particular patient. For further information on Routes of Administration and Dosage Regimes the reader is referred to Chapter 25.3 in Volume 5 of Comprehensive Medicinal Chemistry (Corwin Hansch; Chairman of Editorial Board), Pergamon Press 1990.
The compounds of Formula (I) and their pharmaceutically acceptable salts have activity as pharmaceuticals, in particular as antiviral agents and especially as agents for the treatment of Flaviviridae infections. More particularly, the compounds of Formula (I) and their pharmaceutically acceptable salts may be used in the treatment of hepatitis C virus infection.
Thus, the present invention provides a compound of Formula (I), or a pharmaceutically-acceptable salt thereof, as defined hereinbefore for use in therapy.
In a further aspect, the present invention provides a compound of Formula (I), or a pharmaceutically acceptable salt thereof, as defined hereinbefore for use in the treatment or prophylaxis of hepatitis C virus infection.
In a further aspect, the present invention provides the use of a compound of Formula (I), or a pharmaceutically acceptable salt thereof, as defined hereinbefore in the manufacture of a medicament for use in the treatment or prophylaxis of hepatitis C virus.
In a further aspect, the present invention provides a method of treating, or reducing the risk of, hepatitis C virus infection in a warm-blooded animal, such as man, in need of such treatment which comprises administering to said animal an effective amount of a compound of Formula (I), or a pharmaceutically acceptable salt thereof, as defined hereinbefore.
In the context of the present specification, the term “therapy” also includes “prophylaxis” unless there are specific indications to the contrary. The terms “therapeutic” and “therapeutically” should be construed accordingly.
Prophylaxis is expected to be particularly relevant to the treatment of persons who have suffered a previous episode of, or are otherwise considered to be at increased risk of, HCV infection. Persons at risk of developing a particular disease or condition generally include those having a family history of the disease or condition, or those who have been identified by genetic testing or screening to be particularly susceptible to developing the disease or condition.
The compounds of the invention may also be administered in conjunction with other compounds used for the treatment of viral infections. Thus, the invention further relates to combination therapies for the treatment of a viral infection, particularly infection by hepatitis C virus, wherein a compound of Formula (I), or a pharmaceutically acceptable salt thereof, as defined hereinbefore or a pharmaceutical composition or formulation comprising a compound of Formula (I), is administered concurrently or sequentially or as a combined preparation with another therapeutic agent or agents.
In particular the compounds of the invention may be administered in conjunction with one or more further active ingredients that are selected from:
For example, the compounds of the invention may be administered in conjunction with one or more further active ingredients that are selected from:
In one embodiment of the invention, there is provided a therapeutic combination which comprises a compound of Formula (I), or a pharmaceutically acceptable salt thereof, and one or more further active ingredients that are selected from a HCV protease inhibitor, a HCV polymerase inhibitor, a HCV helicase inhibitor, an interferon, ribavirin and a HCV NS5a inhibitor.
In another embodiment of the invention, there is provided a therapeutic is combination which comprises a compound of Formula (I), or a pharmaceutically acceptable salt thereof, and an interferon, ribavirin and VX950.
In one embodiment of the invention, there is provided a combination product which comprises a compound of Formula (I), or a pharmaceutically acceptable salt thereof, and one or more further active ingredients that are selected from a HCV protease inhibitor, a HCV polymerase inhibitor, a HCV helicase inhibitor, an interferon, ribavirin and a HCV NS5a inhibitor.
In another embodiment of the invention, there is provided a combination product which comprises a compound of Formula (I), or a pharmaceutically acceptable salt thereof, and an interferon, ribavirin and VX950. The term “therapeutic combination” as referred to in this description in intended to mean any combination of the specified pharmaceutical agents that produces a therapeutic effect upon administration.
The term “combination product” as referred to in this description in intended to mean any product that comprises a compound of Formula (I), or a pharmaceutically acceptable salt thereof, and another specified pharmaceutical agent or agents and includes, but is not limited to, an individual pharmaceutical preparation comprising both a compound of Formula (I) and another specified pharmaceutical agent or agents (i.e. a combined preparation), a kit of parts comprising pharmaceutical preparations of a compound of Formula (I) and another specified pharmaceutical agent or agents as individual or separate preparations, storage means for pharmaceutical preparations of a compound of Formula (I) and another specified pharmaceutical agent or agents as either individual or separate preparations and/or means for dispensing pharmaceutical preparations of a compound of Formula (I) and another specified pharmaceutical agent or agents as either individual or separate preparations, wherein the term “individual pharmaceutical preparation” or “individual preparations” is intended to mean a single pharmaceutical preparation which comprises both a compound of Formula (I) and another specified pharmaceutical agent or agents and wherein the term “separate preparations” is intended to mean two or more different pharmaceutical preparations one of which comprises a compound of Formula (I) and the others of which each comprise another specified pharmaceutical agent.
In a further aspect of the invention, there is provided a method of treating hepatitis C virus infection by administering to a patient in need thereof an effective amount of a is compound of Formula (I), or a pharmaceutically acceptable salt thereof, and one or more further active ingredients that are selected from a HCV protease inhibitor, a HCV polymerase inhibitor, a HCV helicase inhibitor, an interferon, ribavirin and a HCV NS5a inhibitor.
In one embodiment of the invention, there is provided a method of treating hepatitis C virus infection by administering to a patient in need thereof an effective amount of a compound of Formula (I), or a pharmaceutically acceptable salt thereof, and an interferon, ribavirin and VX950.
In another aspect of the invention, there is provided a therapeutic combination or a combination product comprising a compound of Formula (I), or a pharmaceutically acceptable salt thereof, and one or more further active ingredients that are selected from a HCV protease inhibitor, a HCV polymerase inhibitor, a HCV helicase inhibitor, an interferon, ribavirin and a HCV NS5a inhibitor, for use in the treatment of hepatitis C virus infection.
In one embodiment of the invention, there is provided a therapeutic combination or a combination product comprising a compound of Formula (I), or a pharmaceutically acceptable salt thereof, and an interferon, ribavirin and VX950, for use in the treatment of hepatitis C virus infection.
In another aspect, the present invention provides the use of a therapeutic combination or a combination product comprising a compound of Formula (I), or a pharmaceutically acceptable salt thereof, and one or more further active ingredients that are selected from a HCV protease inhibitor, a HCV polymerase inhibitor, a HCV helicase inhibitor, an interferon, ribavirin and a HCV NS5a inhibitor, in the manufacture of a medicament for the treatment of hepatitis C virus infection.
In one embodiment, the present invention provides the use of a therapeutic combination or a combination product comprising a compound of Formula (I), or a pharmaceutically acceptable salt thereof, and an interferon, ribavirin and VX950, in the manufacture of a medicament for the treatment of hepatitis C virus infection.
The present invention will now be further explained by reference to the following illustrative examples in which, generally:
1. (QC Method 1)
Liquid Chromatograph: Agilent 1200 series, with PDA detector, scan range 190-400 nm. Mass spectrometer: Agilent MSD 6120 operating in electrospray ionisation mode with +ve/−ve ion switching.
LC Conditions.
Mobile phase A: 0.1% Formic acid in water
Mobile phase B: 0.1% Formic acid in acetonitrile
Gradient.
Flow rate: 1.5 ml/min.
Column: Varian Pursuit Ultra 3 C18 30 mm×2.1 mm
Column temp: 50° C.
2. (QC Method 2)
Liquid Chromatograph: Agilent 1200 series, with PDA detector, scan range 190-400 nm.
Mass spectrometer: Agilent MSD 6120 operating in electrospray ionisation mode with +ve/ −ve ion switching.
LC Conditions.
Mobile phase A: 0.1% Formic acid in water
Mobile phase B: 0.1% Formic acid in acetonitrile
Gradient.
Flow rate: 1.5 ml/min.
Column: Varian Pursuit Ultra 3 C18 30 mm×2.1 mm
Column temp: 50° C.
3. (QC Method 3)
Liquid Chromatograph: Agilent 1200 series, with PDA detector, scan range 190-400 nm.
Mass spectrometer: Agilent MSD 6120 operating in electrospray ionisation mode with +ve/−e ion switching.
LC Conditions.
Mobile phase A: 0.1% formic acid in water
Mobile phase B: 0.1% formic acid in acetonitrile
Gradient.
is Flow rate: 1.0 ml/min.
Column: Varian Pursuit Ultra 3 C18 50 mm×2.1 mm
Column temp: 50° C.
4. (QC Method 4)
Liquid Chromatograph: Waters Acquity UPLC, with PDA detector, (scan range 190-400 nm) and ELSD.
Mass spectrometer: Waters SQD operating in electrospray ionisation mode with +ve/−ve ion switching.
LC Conditions.
Mobile phase A: 0.1% formic acid in water
Mobile phase B: 0.1% formic acid in acetonitrile
Gradient.
Flow rate: 0.6 ml/min
Column: Waters Acquity UPLC BEH C18 50 mm×2.1 mm 1.7 um
Column temp: 50° C.
5. (QC Method 5)
Liquid Chromatograph: Waters Acquity UPLC, with PDA detector, (scan range 190-400 nm) and ELSD.
Mass spectrometer: Waters SQD operating in electrospray ionisation mode with +ve/−ve
ion switching.
LC Conditions.
Mobile phase A: 0.1% ammonia in water
Mobile phase B: 0.1% ammonia in acetonitrile
Gradient.
Flow rate: 0.6 ml/min
Column: Waters Acquity UPLC BEH C18 50 mm×2.1 mm 1.7 um
Column temp: 50° C.;
(x) unless stated otherwise compounds containing an asymmetrically substituted carbon and/or sulfur atom have not been resolved;
(xi) all microwave reactions were carried out in a CEM Discover® microwave synthesiser;
(xii) Preparative high performance liquid chromatography (HPLC) was carried out using the following conditions, unless otherwise stated:
Liquid Chromatograph: Waters 600 pump, W2700 Sample Manager, W996 PDA detector
Mass spectrometer: Waters ZQ operating in electrospray ionisation mode.
LC Conditions.
Mobile phase A: 0.1% formic acid in water
Mobile phase B: 0.1% formic acid in acetonitrile
Gradient.
Flow rate: 20 ml/min
Column: Gemini C18 50 mm×21.2 mm 5 um 110A Axia (Phenomenex Ltd);
(xiii) the following abbreviations have been used herein, where necessary:
A suspension of anthranilic acid (23.7 g, 173 mmol), p-methoxybenzaldehyde (26 ml, 214 mmol) and acetic acid (5 ml, 87 mMol) in DCM (500 ml) was stirred at RT for 2 hrs. The reaction mixture was cooled to 0° C. and sodium triacetoxyborohydride (78 g, 368 mmol) was added in a portionwise manner. On completion of addition the reaction was warmed to RT and stirred overnight.
The reaction was diluted with DCM and washed with water. The organics were dried and concentrated. The residue was triturated with ether to give the title compound; (41.2 g, 160 mmol)
NMR δ 7.89 (1H, dd, J 7.9, 1.6), 7.23-7.33 (3H, m), 6.89 (2H, m), 6.68 (1H, d, J 7.9 Hz), 6.54 (1H, m), 4.34 (2H, s), 3.72 (3H, s);
MS (m/e) 256 [M−H]−, Rt 0.92 min (QC Method 1)
A solution of (1) (41.2 g, 160 mmol) in THF (400 ml) was treated portionwise with triphosgene (17.4 g, 59 mmol) and the resulting solution stirred at RT overnight.
The reaction was concentrated and the resulting solid triturated with ether to give the title compound; (40.1 g, 143 mmol)
NMR δ 8.01 (1H, dd, J 8.2, 1.9), 7.74 (1H, m), 7.25-7.37 (3H, m), 6.88 (2H, m), 5.21 (2H, s), 3.70 (3H, s);
MS (m/e) No MI observed, Rt 2.8 min (QC Method 3)
A suspension of (2) (40.1 g, 143 mmol) and glycine (25.0 g, 333 mmol) in acetic acid (300 ml) was heated at reflux overnight.
The reaction was cooled and concentrated. The residue was partitioned between DCM and 1M HCl. The organics were separated, washed with saturated NaHCO3 and brine and dried before being concentrated. The resulting solid was triturated with ether to give the title compound; (32.1 g, 108 mmol)
NMR δ 8.78 (1H, t, J 6.0), 7.65 (1H, dd, J 7.6, 1.3), 7.45-7.58 (2H, m), 7.28 (1H, ddd, J 8.2, 6.3, 1.9), 7.04 (2H, d, J 8.4), 6.81 (2H, d, J 8.4), 5.27 (1H, d, J 15.6), 4.88 (1H, d, J 15.6), 3.69 (3H, s);
MS (m/e) 297 [M+H]+, Rt 0.71 min (QC Method 2)
A suspension of (3) (11.1 g, 38 mmol) and N,N-dimethylaniline (9.5 ml, 75 mmol) in toluene (100 ml) was treated with phosphorus oxychloride (3.5 ml, 38 mmol) and the resulting solution heated at reflux overnight.
The reaction was cooled to RT, diluted with toluene and poured into ice-cold saturated K2CO3 solution (ca. 300 ml). The organics were separated and the aqueous backwashed with toluene. The combined organics were dried and concentrated to an oil. This was applied to a flash-silica column, preconditioned with 3% TEA in PE, and eluted with a PE to 1:3 EtOAc:PE gradient to give the title compound; (10.7 g, 34 mmol) NMR δ 7.71 (1H, dd, J 8.5, 0.9), 7.54-7.64 (2H, m), 7.27-7.35 (1H, m), 6.96 (2H, d, J 8.6). 6.79 (2H, d, J 8.6), 5.28 (1H, d, J 15.6), 4.88 (1H, d, J 15.6), 4.45 (1H, d, J 10.7), 3.86 (1H, d, J 10.7), 3.66 (3H, s);
MS (m/e) 315 [M+H]+, Rt 0.90 min (QC Method 2)
A stirred solution of (4) (10.7 g, 34 mmol) in anhydrous THF (200 ml), under N2, was cooled to −78° C. and treated dropwise with 1M potassium t-butoxide in THF (40 ml, 40 mmol). After 30 minutes a solution of trisyl azide (12.3 g, 40 mmol) in THF (60 ml ) was added. After a further 45 minutes acetic acid (30 ml, 525 mmol) was added and the reaction allowed to warm to RT and stirred overnight.
The reaction was concentrated and the residue portioned between EtOAc and saturated NaHCO3 solution. The organics were separated, dried and concentrated to give an oil. This was applied to a flash-silica column, preconditioned with 3% TEA in PE, and eluted with a PE to 1:3 EtOAc:PE gradient to give the title compound; (7.4 g, 21 mmol) NMR δ 7.75 (1H, dd, J 8.5, 0.9), 7.62-7.68 (2H, m), 7.32-7.40 (1H, m), 6.96 (2H, d, J 8.6), 6.80 (2H, d, J 8.6), 5.33 (1H, d, J 15.5), 4.98 (1H, s), 4.95 (1H, d, J 16.4), 3.66 (3H, s);
MS (m/e) No MI observed, Rt 1.02 min (QC Method 2)
A solution of (5) (7.4 g, 21 mmol) in 1,4-dioxane (100 ml) was added to platinum (IV) oxide (0.74 g, 3.2 mmol) and di-tent-butyl dicarbonate (7.4 g, 34 mmol) and placed under an atmosphere of H2 using standard hydrogenation procedures.
On completion, the reaction was filtered through Celite® and the filtrate concentrated to give an oil. This was applied to a flash-silica column, preconditioned with 3% TEA in PE, and eluted with a PE to 1:3 EtOAc:PE gradient to give the title compound; (6.6 g, 15 mmol)
NMR δ 7.98 (1H, d, J 8.8), 7.75 (1H, d, J 7.9), 7.62-7.71 (2H, m), 7.33-7.41 (1H, m), 6.92 (2H, d, J 8.5), 6.78 (2H, d, J 8.5), 5.37 (1H, d, J 15.5), 5.09 (1H, d, J 8.5), 4.89 (1H, d, J 15.5), 3.65 (3H, s), 1.37 (9H, s);
MS (m/e) 330 [(M-Boc)+H]+, Rt 1.06 min (QC Method 2) tert-Butyl 5-(2,6-dichlorophenyl)-1-(4-methoxybenzyl)-2-oxo-2,3-dihydro-1H-benzo[e][1,4]diazepin-3-ylcarbamate (7a)
A suspension of (6) (2.50 g, 5.8 mmol), 2,6-dichlorophenylboronic acid (1.66 g, 8.7 mmol), tetrakis(triphenylphosphine)palladium(0) (3.36 g, 2.9 mmol), K2CO3 (1.60 g, 11.6 mmol) and Ag2CO3 (8.00 g, 29 mmol) in THF (100 ml) was heated at reflux for 1 hr. The inorganics were removed by filtration and the filtrated reduced onto silica. Column chromatography (SiO2; 4:1→1:1 PE:EtOAc) gave the title compound; (1.40 g, 2.6 mmol)
NMR δ 7.93 (1H, d, J 8.8), 7.63-7.79 (3H, m), 7.40-7.52 (2H, m), 7.17-7.32 (3H, m), 7.08 (1H, d, J 8.2), 6.84 (2H, d, J 8.2), 5.24 (1H, d, J 8.2), 5.18 (2H, s), 3.72 (3H, s), 1.41 (9H, s);
MS (m/e) 540 [MH]+, Rt 2.86 min (QC Method 3)
A suspension of (6) (4.3 g, 10 mmol), 2,4,6-trichlorophenyl boroninc acid (4.3 g, 19 mmol), tetrakis(triphenylphospine)palladium (0) (4.6 g, 4 mmol), K2CO3 (3.0 g, 21 mmol) and Ag2CO3 (8.6 g, 31 mmol) in THF (120 ml) was heated at reflux for 72 hrs. The reaction was cooled and filtered through celite. The filtrate was reduced onto silica and column chromatography (SiO2; PE→3:2 PE:ether) gave a partially pure sample. Further chromatograph (SiO2; 19:1 DCM:MeOH) gave the title compound; (1.3 g, 2.2 mmol)
NMR δ 7.96 (1H, d, J 8.5), 7.77 (1H, d, J 8.2), 7.59-7.71 (2H, m), 7.05-7.30 (4H, m), 6.80 (2H, d, J 8.5), 5.04-5.25 (3H, m), 3.67 (3H, s), 1.38 (9H, s);
MS (m/e) 576 [M+H]+, Rt 1.23 min (QC Method 2)
A solution of (7a) (1.40 g, 2.6 mmol) in DCM (50 ml) was treated with TFA (5 ml) and stirred for 3 hr. The reaction was diluted with DCM and poured into saturated NaHCO3 solution to neutralise. The organics were separated, dried and concentrated to give the title compound; (1.14 g, 2.6 mmol)
MS (m/e) 440 [MH]+, Rt 1.97 min (QC Method 3)
A solution of (7b) (1.2, 2 mmol) in DCM (50 ml) was treated with TFA (5 ml) and stirred for 3 hrs. The reaction was diluted with DCM (100 ml) and then basified with saturated NaHCO3 solution. The organics were separated, dried and concentrated to give the title compound; (0.91 g, 1.9 mmol)
NMR (CDCl3) δ 7.42-7.50 (3H, m), 7.23-7.30 (3H, m), 7.16 (2H, d, J 8.5), 6.83 (2H, d J 8.5), 5.37 (1H, d, J 15.1), 4.90 (1H, d, J 15.1), 4.70 (1H, s), 3.79 (3H, s), 2.53 (2H, br);
MS (m/e) 476 [M+H]+, Rt 1.21 min (QC Method 3)
A solution of (7b) (1.7 g, 3 mmol) in anhydrous anisole (25 ml) was treated with aluminium trichloride (4.0 g, 30 mmol) and then heated at 70° C. for 4 hrs.
The reaction was cooled to RT, diluted with EtOAc (200 ml) and basified with saturated K2CO3 solution. The resulting slurry was filtered through Celite® and the organics separated, dried and concentrated. The resulting residue was taken into DCM (50 ml) and stirred for 2 hrs with 2M HCl (50 ml). The resulting precipitate was filtered off and dried under vacuum to give the title compound; (0.82 g, 2.3 mmol)
NMR δ 11.54 (1H, s), 9.09 (3H, br, s), 7.95 (1H, d, J 1.9), 7.77 (1H, d, J 1.9), 7.59-7.72 (1H, m), 7.34 (1H, d, J 7.9), 7.14-7.26 (2H, m), 5.27 (1H, s);
MS (m/e) 356 [M+H]+, Rt 0.69 min (QC Method 2)
To a solution of 3,5-dichlorophenol (30 g, 184 mmol) in toluene (600 ml) at 0° C. was slowly is added NaH (60% dispersion in mineral oil, 14.7 g 368 mmol). The reaction mixture was warmed to room temperature and stirred for 20 min before cooling back to 0° C. I2 (49 g, 193 mmol) was then added and the reaction mixture was stirred at room temperature for 16 h before quenching with 2M HCl (500 ml). The organic materials were then extracted into Et2O, washed with brine, dried and then concentrated to provide the crude product which was used without further purification;
NMR (CDCl3) δ 7.14 (1H, d, J 2.2), 6.97 (1H, d, J 2.2), 5.68 (1H, br s);
MS (m/e) 287 [M−H]−, Rt 0.98 min (QC Method 2)
To the crude material from the preparation of (10) in DMF (300 ml ) was added CS2CO3 (63.7 g, 196 mmol) and MeI (14.4 ml, 231 mmol). After 16 h, the reaction mixture was filtered over Celite, concentrated, and then partitioned between EtOAc and 2M HCl. Separation of the organic phase and concentration provided an oil, which was triturated from PE to provide the title compound as a pale yellow solid; (32 g, 57%) NMR (CDCl3) δ 7.19 (1H, d, J 2.2), 6.74 (1H, d, J 2.2), 3.95 (3H, s);
MS (m/e) No MI observed, Rt 1.15 min (QC Method 2).
Using an analogous method to the preparation of 11a, the title boronate was prepared as a white solid; (35 g, 60%)
NMR (CDCl3) δ 7.12 (1H, d, J 2.1), 6.66 (1H, d, J 2.1), 4.10 (2H, q, J 7.0), 1.53 (3H, t, J 7.0)
To a solution of 11a (21.0 g, 69.3 mmol) in THF (250 ml) was sequentially added CuI (1.32 g, 6.9 mmol) and NaH (60% dispersion in mineral oil, 4.2 g, 104 mmol), followed by a slow addition of pinacolborane (15.1 ml, 104 mmol). The resulting suspension was stirred at room temperature for 16 h under a N2 atmosphere, and then quenched with saturated
NH4Cl (250 ml). After 20 min, the mixture was extracted with EtOAc (×3), dried and then filtered over Celite. Concentrated and purification by column chromatography (SiO2; EtOAc:PE 0:1→3:7) to afford the title boronate as a white solid; (15.1 g, 72%) NMR (CDCl3) 6.87 (1H, d, J 1.6), 6.63 (1H, d, J 1.6), 3.37 (3H, s), 1.32 (12H, s); MS (m/e) No MI observed, Rt 1.17 min (QC Method 2)
Using an analogous method to the preparation of 12a, 11b (23.5 g, 74.1 mmol) provided the title boronate as a white solid; (18.5 g, 79%)
NMR (CDCl3) δ 6.96 (1H, d, J 1.6), 6.70 (1H, d, J 1.6), 4.00 (2H, q, J 7.0), 1.45-1.38 (3H, m), 1.42 (12H, s);
MS (m/e) No MI observed, Rt 1.22 min (QC Method 2)
3,5-Dichloro-2-iodotoluene (12.5 g, 43.6 mmol), NBS (11.7 g, 66 mmol) and benzoyl peroxide (1.1 g, 4.4 mmol) in CCl4 were heated at 100° C. for 6 d under N2. After cooling to room temperature, the suspension was filtered and concentrated. The mixture was then diluted with DCM, washed with water, and then concentrated. The crude product could be used without further purification, or can be purified by column chromatography (SiO2; is EtOAc:PE 0:1→1:49) to afford the title bromide as a white solid; (6.7 g, 42%)
NMR (CDCl3) δ 7.44 (1H, dd, J 2.2, 6.6), 7.40-7.38 (1H, m), 4.64 (1H, s), 4.60 (1H, s); MS (m/e) No MI observed, Rt 1.19 min (QC Method 2).
The crude material from preparation of 14 (theoretical yield 15.9 g, 43.5 mmol) was dissolved in DCM (150 ml) and treated with TEA (12.1 ml, 87 mmol) and morpholine (7.5 ml, 87 mmol). After 16 h, the reaction mixture was washed with water, dried, concentrated and purified by column chromatography (SiO2; EtOAc:PE 0:1→1:4) to afford the title compound as a white solid; (7.6 g, 47% over 2 steps)
NMR (CDCl3) δ 7.50-7.28 (2H, m), 3.82-3.72 (4H, m), 3.61 (1H, s), 3.56 (1H, s), 2.60-2.52 (4H, m)
To a solution of 14 (7.6 g, 20.3 mmol) in THF (75 ml) was sequentially added CuI (0.39 g, 2.0 mmol) and NaH (60% dispersion in mineral oil, 1.2 g, 31 mmol), followed by a slow addition of pinacolborane (4.4 ml, 31 mmol). The resulting suspension was stirred at room temperature for 3 days under a N2 atmosphere, and then quenched with saturated NH4Cl (750 ml). After 20 min, the mixture was extracted with EtOAc (×3), dried and then filtered over Celite. Concentrated and purification by column chromatography (SiO2; EtOAc:PE 0:1→2:3) to afford the title boronate as a white solid; (3.5 g, 46%)
NMR (CDCl3) δ 7.17 (1H, d, J 1.9), 7.09 (1H, d, J 1.9), 3.67-3.60 (4H, m), 3.45 (2H, s), 2.41-2.34 (4H, m), 1.35 (12H, s)
A solution of 6 (2.35 g, 5.5 mmol), boronate 15 (1.44 g, 6.6 mmol) and Pd(PPh3)4 (0.63 g, 0.6 mmol) in 1,2-dimethoxyethane (50 ml) and saturated Na2CO3 (25 ml) were heated at 100° C. for 16 h. The reaction mixture was cooled to room temperature, diluted with water, extracted with EtOAc (×3), and dried. Concentration and purification by column chromatography (SiO2; EtOAc:PE 0:1→1:1) provided the title compound as a pale yellow foam; (2.43 g, 69%)
NMR (CDCl3) δ 7.50-7.36 (3H, m), 7.24-7.19 (1H, m), 7.15-7.09 (1H, m), 6.88-6.81 (2H, m), 6.52-6.45 (1H, m), 5.43 (1H, d, J 8.8), 5.31 (1H, d, J 15.3), 4.86 (1H, d, J 15.3), 4.04 (1H, d, J 13.8), 3.80 (3H, s), 3.69-3.50 (4H, m), 3.31 (1H, d, J 13.8), 2.62-2.41 (4H, m), 1.46 (9H, s);
MS (m/e) 639 [M+H]+, Rt 0.95 min (QC Method 2)
A solution of 6 (16.0 g, 37 mmol), boronate 12a (13.0 g, 43 mmol) and Pd(PPh3)4 (3.7 g, 3.2 mmol) in 1,2-dimethoxyethane (120 ml) and saturated Na2CO3 (60 ml) were heated at 100° C. for 2 h. The reaction mixture was cooled to room temperature, diluted with water, extracted with EtOAc (×3), and dried. Concentration and trituration with ether provided the title compound as a white solid. (11.8 g) Concentration of the mother liquor followed by purification by column chromatography (SiO2; EtOAc:PE 0:1→2:3) provided a further crop of the desired product as a white solid; (7.5 g, combined mass 19.3 g, total yield 91%)
NMR δ 8.01-7.80 (0.3H, m), 7.70-7.44 (1.7H, m), 7.41-7.04 (6H, m), 6.92-6.77 (2H, m), 5.25-4.95 (2H, m), 3.86 (1.7H, s), 3.70 (1.3H, s), 3.69 (1.7H, s), 3.35 (1.3H, s), 1.38 (7.8H, s), 1.31 (1.2H, s);
MS (m/e) 570 [M+H]+, Rt 1.19 min (QC Method 2)
A solution of 6 (16.2 g, 38 mmol), boronate 12b (13.1 g, 42 mmol) and Pd(PPh3)4 (1.3 g, 1.1 mmol) in 1,2-dimethoxyethane (160 ml) and saturated Na2CO3 (80 ml) were heated at 100° C. After 2 h, additional Pd(PPh3)4 (0.04 g, 0.3 mmol) was added and the reaction mixture heated for a further 1 h. After cooling to room temperature, the mixture was diluted with water, extracted with EtOAc (×3), and dried. Concentration and trituration with ether provided the title compound as a white solid. (13.4 g) Concentration of the mother liquor followed by purification by column chromatography (SiO2; EtOAc:PE 0:1→2:3) provided another crop of the desired product as a white solid; (3.8 g, combined mass 17.2 g, total yield 78%)
NMR δ 7.90-7.78 (0.4H, m), 7.71-7.50 (1.1H, m), 7.39-7.05 (6.4H, m), 6.96-6.77 (2.1H, m), 5.43-5.09 (1.8H, m), 4.61 (0.2H, d, J 15.8), 4.23-4.01 (0.8H, m), 3.84-3.65 (1.2H, m), 3.74 (1.2H, s), 3.68 (1.8H, s), 1.39 (9H, s), 1.20 (1.8H, t, J 7.0), 0.78 (1.2H, t, J 7.0);
MS (m/e) 584 [M+H]+, Rt 1.23 min (QC Method 2)
To tert-butyl 5-aryl-1-(4-methoxybenzyl)-2-oxo-2,3-dihydro-1H-benzo[e][1,4]diazepin-3-ylcarbamate (16) (5.8 mmol) in anisole (30 ml) was added AlCl3 (28.8 mmol) and the solution heated to 70° C. under N2 for 16 h. Upon cooling to room temperature, the reaction mixture was slowly added to saturated NaHCO3 (200 mL). Celite was added to the suspension, which was then filtered over Celite, washing with copious quantities of a mixture of EtOAc and acetone. The aqueous phase from the filtrate was subsequently removed, and the organic materials were extracted with EtOAc (×2). The combined organic extracts were dried, concentrated and triturated with ether to provide the doubly deprotected material.
Following General Method A, 16a (1.0 g, 1.6 mmol) provided 17a as a pale brown powder. (0.4 g, 61%)
NMR: Peaks too broad to assign;
MS (m/e) 419, [M+H]+, Rt 0.58 min (QC Method 2).
Following General Method A, 16b (4.0 g, 7.0 mmol) provided 17b as a pale yellow powder. (2.0 g, 81%)
NMR δ 10.77 (1H, br s), 7.53-7.44 (1H, m), 7.35 (0.3H, d, J 1.6), 7.30 (0.7H, d, J 1.6), 7.20-7.02 (4H, m), 4.27 (1H, m), 3.91 (2H, m), 3.50 (1H, m);
MS (m/e) 350 [M+H]+, Rt 0.62 min (QC Method 2).
Following General Method A, 16c (3.4 g, 5.8 mmol) provided 17c as a pale grey powder. (1.5 g, 71%)
NMR δ 10.81 (0.6H, s), 10.77 (0.4H, s), 7.53-7.42 (1H, m), 7.34-7.27 (1H, m), 7.21-7.04 (4H, m), 4.30-4.12 (1.8H, m), 3.91-3.75 (0.6H, m), 3.70-3.54 (0.6H, m), 1.28 (1.2H, t, J 7.0), 0.81 (1.8H, t, J 7.0);
MS (m/e) 364 [M+H]+, Rt 0.65 min (QC Method 2).
A solution of 2-fluoro-5-chlorobenzoic acid (2.9 g, 16.6 mmol) and 2-methoxypropanol (4.5 g, 50 mmol) in anhydrous THF (125 ml) was treated portionwise with NaH (60% dispersion in mineral oil, 5.0 g, 125 mmol). The resulting mixture was stirred at reflux for 24 hrs.
The reaction was cooled to RT, diluted with EtOAc and acidified with 2M HCl.
The organics were separated, dried and concentrated to give an oil. Column chromatography (SiO2; 1:0→1:1 PE:EtOAc) gave the title compound (1.42 g, 5.8 mmol)
NMR (CDCl3) δ 8.16 (1H, d, J 2.8), 7.49 (1H, dd, J 8.8, 2.8), 7.00 (1H, d, J 8.8), 4.35 (2H, m), 3.57 (2H, m), 3.39 (3H, s), 2.17 (2H, m)
Synthesis analogous to 18a, using 2-(S)-methoxy-propanol
NMR (CDCl3) δ 8.10 (1H, d, J 2.8), 7.43 (1H, dd, J 8.8, 2.8), 6.98 (1H, d, J 8.8), 4.26 (1H, dd, J 9.5, 3.2), 4.02 (1H, m), 3.80 (1H, m), 3.42 (3H, s), 1.28 (3H, d, J 6.3)
Synthesis analagous to 18a, using 2-ethoxyethanol
NMR (CDCl3) δ 8.16 (1H, d, J 2.5), 7.52 (1H, dd, J 8.5, 2.5), 7.03 (1H, d, J 8.5), 4.37 (2H, t, J 4.4), 3.86 (J 4.4), 3.63 (2H, q, J 7.0), 1.28 (3H, t, J 7.0);
MS (m/e) 243 [M−H]−, Rt 1.41 min (QC Method 1)
Synthesis analogous to 18a, using 1-methoxypropan-2-ol
NMR δ 7.57 (1H, d, J 2.8), 7.46 (1H, dd, J 8.8, 2.8), 7.18 (1H, d, J 8.8), 4.60 (1H, m), 3.37-3.52 (2H, m), 3.26 (3H, s), 1.19 (3H, d, J 6.3);
MS (m/e) 243 [M−H]−, Rt 1.41 min (QC Method 1)
Synthesis analogous to 18a, using 2-(2-methoxyethoxy)ethanol
NMR (CDCl3) δ 7.61 (1H, d, J 2.8), 7.03 (1H, dd, J 8.8, 2.8), 6.27 (1H, d, J 8.8), 3.95 (2H, m), 3.76 (2H, m), 3.62 (2H, m), 3.47 (2H, m), 3.19 (3H, s)
Synthesis analogous to 18a, using 2-isobutoxyethanol
NMR (CDCl3) δ 7.61 (1H, d, J 2.5), 7.53 (1H, d, J 8.8, 2.8), 7.19 (1H, d, J 8.8), 4.17 (2H, m), 3.70 (2H, m), 3.24 (2H, d, J 6.6), 1.78 (1H, m), 0.84 (6H, d, J 6.6)
Synthesis analogous to 18a, using 2-pentlyoxyethanol
NMR (CDCl3) δ 7.61 (1H, d, J 2.5), 7.51 (1H, dd, J 9.2, 2.8), 7.17 (1H, d, J 9.2), 4.16 (2H, m), 3.69 (2H, m), 1.19-1.32 (6H, m), 0.80-0.90 (5H, m)
Synthesis analogous to 18a, using 2-(2-ethoxyethoxy)ethanol
NMR (CDCl3) δ 7.62 (1H, d, J 8.2), 7.49 (1H, dd, J 8.8, 2.8), 7.15 (1H, d, J 9.2), 4.15 (2H, m), 3.74 (2H, m), 3.43-3.54 (4H, m), 1.09 (2H, t, J 7.0), 1.08 (3H, t, J 7.0)
Synthesis analogous to 18a, using (tetrahydrofuran-2-yl)methanol
NMR (CDCl3) δ 8.13 (1H, d, J 2.8), 7.51 (1H, dd, J 8.8, 2.8), 7.03 (1H, d, J 8.8), 4.29-4.40 (2H, m), 3.78-4.16 (3H, m), 1.63-2.21 (4H, m);
MS (m/e) 255 [M−H]−, Rt 1.40 min (QC Method 1)
Synthesis analogous to 18a, using 2-butoxyethanol
NMR (CDCl3) δ 8.15 (1H, d, J 2.8), 7.51 (1H, dd, J 8.8, 2.8), 7.04 (1H, d, J 8.8), 4.38 (2H, m), 3.85 (2H, m), 3.56 (2H, t, J 6.6), 1.63 (2H, m), 1.39 (2H, m), 0.94 (3H, t, J 7.3);
MS (m/e) 273 [M+H]+, Rt 0.87 min (QC Method 2)
Synthesis analogous to 18a, using 2-phenoxyethanol
NMR δ 7.59 (1H, d, J 2.8), 7.54 (1H, dd, J 8.8, 2.8), 7.20-7.32 (3H, m), 6.89-6.99 (3H, m), 4.37 (2H, m), 4.28 (2H, m);
MS (m/e) 291 [M−H]−, Rt 1.62 min (QC Method 1)
Synthesis analogous to 18a, using 2-(2-(dimethylamino)ethoxy)ethanol
MS (m/e) 288 [M+H]+, Rt 0.44 min (QC Method 2)
General Method B: 2-(Methoxyethoxy)-benzoic Acids from Salicylic Acids
A solution of 5-chlorosalicylic acid (75.0 g, 0.44 mol) in MeOH (250 ml) was treated portionwise with acetyl chloride (5 ml, 70 mmol) and heated at 90° C. for 3 d. The reaction mixture was chilled to −18° C. and the resulting precipitate collected by filtration. Further purification by trituration with 1:1 ether:PE ether gave the title compound; (71.99 g, 038 mmol)
NMR (CDCl3) δ 10.70 (1H, s), 7.82 (1H, d, J 2.8), 7.42 (1H, dd, J 8.8, 2.8), 6.95 (1H, d, J 8.8)
A solution of 19a (10.0 g, 53.6 mmol) in DMF (250 ml) was treated with K2CO3 (19.5 g, 140 mmol) and 2-bromoethyl methyl ether (16.7 g, 120 mmol) and stirred at 90° C. overnight.
The reaction was cooled to RT, concentrated and the residue partitioned between water and DCM. The organics were separated, dried and concentrated. Column chromatography (SiO2; 4:1 PE:ether) gave the title compound; (11.05 g, 45 mmol)
NMR (CDCl3) δ 7.77 (1H, d, J 2.8), 7.39 (1H, dd, J 8.8, 2.8), 6.94 (1H, d, J 8.8), 4.17 (2H, m), 3.88 (3H, s), 3.78 (2H, m), 3.46 (3H, s)
A solution of 20a (11.05 g, 45 mmol) in THF (200 ml) was treated with a 1M LiOH (75 ml, 75 mmol) and stirred for 48 hrs.
The reaction was diluted with ether and the organics separated. The aqueous was acidified with conc. HCl and extracted with DCM. The organics were dried and concentrated to give the title compound; (9.89 g, 43 mmol)
NMR (CDCl3) δ 10.70 (1H, br), 8.10 (1H, d, J 2.5), 7.48 (1 h, dd, J 8.8, 2.5), 7.01 (1H, d, J 8.8), 4.34 (2H, m), 3.79 (2H, m), 3.45 (3H, s);
MS (m/e) 229 [M−H]−, Rt 1.30 min (QC Method 1)
Synthesised according to General Method B, using salicylic acid
NMR (CDCl3) δ 11.10 (1H, br, s), 8.19 (1H, dd, J 8.9, 1.9), 7.57 (1H, m), 7.17 (1H, m), 7.07 (1H, dd, J 8.2, 0.9), 4.40 (2H, m), 3.83 (2H, m), 3.48 (3H, s)
Synthesised according to General Method B, using 5-fluorosalicylic acid
NMR (CDCl3) δ 7.29-7.44 (2H, m), 7.16 (1H, dd, J 9.2, 4.4), 4.15 (2H, m), 3.66 (2H, m), 3.32 (3H, s)
Synthesised according to General Method B, using 5-methylsalicylic acid
NMR (CDCl3) δ 11.00 (1H, br), 7.97 (1H, d, J 2.2 Hz), 7.34 (1H, dd, J 8.5, 2.2), 6.96 (1H, d, J 8.5), 4.35 (2H, m), 3.79 (2H, m), 3.46 (3H, s), 2.34 (3H, s)
Synthesised according to General Method B, using 5-acetyl-2-hydroxybenzoic acid
NMR (CDCl3) δ 8.72 (1H, d, J 2.5), 8.21 (1H, dd, J 8.5, 2.5), 7.15 (1H, d, J 8.8), 4.46 (2H, m), 3.86 (2H, m), 3.49 (3H, s), 2.63 (3H, s)
Synthesised according to General Method B, using 5-(trifluoromethoxy)salicylic acid
NMR (CDCl3) δ 8.06 (1H, d, J 3.2), 7.43 (1H, dd, J 8.8, 3.2), 7.12 (1H, d, J 8.8), 4.41 (2H, m), 3.84 (2H, m), 3.50 (3H, s)
Synthesised according to General Method B, using 5-bromosalicylic acid
NMR (CDCl3) δ 8.27 (1H, d, J 2.8), 7.65 (1H, dd, J 8.8, 2.8), 6.97 (1H, d, J 8.8), 4.37 (2H, m), 3.82 (2H, m), 3.48 (1H, s)
To a stirring solution of 19a (20.0 g, 110 mmol) in acetone (200 ml) was added K2CO3 (22.2 g, 160 mmol) and N-(2-bromoethyl)phthalimide (35.4 g, 140 mmol), and the suspension was heated at reflux for 5 d. The mixture was cooled to RT, concentrated, and then filtered, washing the cake thoroughly with DCM (500 ml). The filtrate was concentrated and purified by column chromatography (SiO2; EtOAc:PE 1:4→1:1) to afford the title phthalimide as a white solid; (14.2 g, 37%)
NMR (CDCl3) δ 7.82-7.71 (2H, m), 7.67-7.54 (3H, m), 7.28 (1H, dd, J 8.8, 2.5), 6.83 (1H, d, J 8.8), 4.22 (2H, t, J 5.7), 4.02 (2H, t, J 5.7), 3.72 (3H, s);
MS (m/e) No MI observed, Rt 0.95 min (QC Method 2)
To a stirring solution of methyl 19a (10.0 g, 54 mmol) in acetone (100 ml) was added K2CO3 (14.8 g, 107 mmol) and N-(3-bromopropyl)phthalimide (18.7 g, 70 mmol), and the suspension was heated at reflux for 3 days. The mixture was cooled to RT, and then filtered, washing with acetone (2×100 ml). The cake was partitioned between DCM (150 ml) and water (150 ml) then the organic layer was removed, backwashing the aqueous phase with further DCM (150 ml). The combined organic extracts were dried to afford the title phthalimide as a white solid; (14.1 g, 71%)
NMR (CDCl3) δ 7.87-7.71 (5H, m), 7.40 (1H, dd, J 8.8, 2.8), 6.91 (1H, d, J 8.8), 4.12 (2H, t, J 6.0), 3.97 (2H, t, J 7.0), 3.92 (3H, s), 2.30-2.20 (2H, m);
MS (m/e) No MI observed, Rt 0.95 min (QC Method 2)
A suspension of phthalimide 22a (14 g, 39 mmol) in 1,4-dioxane (100 ml ) and concentrated HCl (50 ml) was heated at reflux for 3 days. Additional concentrated HCl (50 ml) was added and the mixture heated for a further 1 d. Concentration followed by trituration in acetone afforded the title hydrochloride salt as an off-white solid (8.4 g, 86%)
NMR δ 8.16 (3H, br s), 7.69 (1H, d, J 2.8), 7.61 (1H, dd, J 8.8, 2.8), 7.27 (1H, d, J 8.8), 4.29 (2H, t, J 5.4), 3.28-3.13 (3H, m);
MS (m/e) No MI observed, Rt 0.20 min (QC Method 2)
A suspension of phthalimide 22b (30 g, 80 mmol) in 1,4-dioxane (150 ml) and concentrated HCl (80 ml) was heated at reflux for 5 days. Additional concentrated HCl (80 ml) was added and the mixture heated for a further 2 days. Concentration followed by trituration in acetone afforded the title hydrochloride salt as an off-white solid (15 g, 71%); NMR δ 8.01 (3H, br s), 7.70 (1H, d, J 2.8), 7.58 (1H, dd, J 8.8, 2.8), 7.19 (1G, d, J 8.8), 4.21 (2H, t, J 5.7), 3.12-3.01 (2H, m), 2.12-2.02 (2H, m);
MS (m/e) No MI observed, Rt 0.39 min (QC Method 2)
SOCl2 (7.3 ml, 100 mmol) was added dropwise to a solution of carboxylic acid 23a (8.4 g. 33 mmol) in MeOH (70 ml) at 0° C. The resulting mixture was heated at 60° C. for 16 hr, then cooled to room temperature and concentrated to afford methyl ester 24a as a white solid; (8.9 g, quantitative)
NMR δ 8.14 (3H, br s), 7.71 (1H, d, J2.8), 7.65 (1H, dd, J 8.8, 2.8), 7.28 (1H, d, J 8.8), 4.28 (2H, t, J 5.4), 3.83 (3H, s), 3.21 (2H, t, J 5.4);
MS (m/e) 230 [M+H]+, Rt 0.49 min (QC Method 2)
Synthesis analogous to 24a, carboxylic acid 23b (15 g, 55 mmol) afforded methyl ester 24b as a white solid; (16 g, quantitative)
NMR δ 7.94 (3H, br s), 7.69 (1H, d, J 2.8), 7.58 (1H, dd, J 8.8, 2.8), 7.19 (1H, d, J 8.8), 4.17 (2H, t, J 5.8), 3.82 (3H, s), 3.06-2.91 (2H, m), 2.10-1.99 (2H, m);
MS (m/e) 244 [M+H]+, Rt 0.54 min (QC Method 2)
A solution of the amine hydrochloride salt (3.6 mmol) in DCM (10 ml) was treated with TEA (8.9 mmol) and the acyl chloride (5.4 mmol). After 4 hr, 1M HCl (5 ml) was added and the organic phase was removed and washed with saturated NaHCO3 (5 ml) and dried. Unless otherwise stated, the product was used without further purification.
Following General Method C, amine salt 24a (1.0 g, 3.8 mmol) and acetyl chloride provided product as a pale brown solid and was used without further purification; (1.0 g, quantitative)
NMR (CDCl3) δ 7.80 (1H, d, J 2.8), 7.44 (1H, dd, J 8.8, 2.5), 7.08 (1H, br s), 6.94 (1H, d, J 8.8), 4.14 (2H, t, J 5.1), 3.91 (3H, s), 3.73-3.62 (2H, m), 2.03 (3H, s);
MS (m/e) 272 [M+H]+, Rt 0.68 min (QC Method 2).
Following General Method C, amine salt 24b (0.5 g, 1.8 mmol) and acetyl chloride provided product as a yellow oil after purification by column chromatography (SiO2; EtOAc:PE is 1:1→7:3); (0.27 g, 53%)
NMR (CDCl3) δ 7.80 (1H, d, J 2.8), 7.44 (1H, dd, J 8.8, 2.5), 7.08 (1H, br s), 6.94 (1H, d, J 8.8), 4.14 (2H, t, J 5.1), 3.91 (3H, s), 3.73-3.62 (2H, m), 2.03 (3H, s);
MS (m/e) 286 [M+H]+, Rt 0.73 min (QC Method 2).
Following General Method C, amine salt 24a (1.0 g, 3.8 mmol) and propionyl chloride provided product as a pale brown solid and was used without further purification; (1.1 g, quantitative)
NMR (CDCl3) δ 7.80 (1H, d, J 2.8), 7.44 (1H, dd, J 8.8, 2.8), 6.97 (1H, br s), 6.93 (1H, d, J 8.8), 4.15-4.11 (2H, m), 3.91 (3H, s), 3.73-3.66 (2H, m), 2.27 (2H, q, J 7.6), 1.17 (3H, t, J 7.6);
MS (m/e) 286 [M+H]+, Rt 0.73 min (QC Method 2)
Following General Method C, amine salt 24b (1.0 g, 3.6 mmol) and propionyl chloride provided product as an orange oil after purification by column chromatography (SiO2; MeOH:DCM 0:1→1:49); (0.68 g, 63%)
NMR (CDCl3) δ 7.91 (1H, d, J 2.5), 7.58 (1H, br s), 7.48 (1H, dd, J 8.8, 2.8), 6.94 (1H, d, J 9.2), 4.16 (2H, t, J 5.4), 3.92 (3H, s), 3.56 (2H, dd, J 11.1, 5.4), 2.36 (2H, q, J 7.6), 2.12-2.05 (2H, m), 1.18 (3H, t, J 7.6);
MS (m/e) 300 [M+H]+, Rt 0.77 min (QC Method 2)
A solution of 24a (0.9 g, 3.4 mmol) in DCM (10 ml) was treated with TEA (8.9 mmol) and methylsulfonyl chloride (5.4 mmol). After 16 h, 1M HCl (5 ml) was added and the organic phase was removed and washed with saturated NaHCO3 (5 ml) and dried (MgSO4) to give product as a colourless oil (1.0 g, quantitative).
NMR (CDCl3) δ 7.81 (1H, d, J 2.8), 7.44 (1H, dd, J 8.8, 2.8), 6.92 (1H, d, J 8.8), 6.06-5.95 (1H, m), 4.23 (2H, t, J 4.7), 3.90 (3H, s), 3.53 (2H, dd, J 10.1, 5.3), 3.01 (3H, s);
MS (m/e) 308 [M+H]+, Rt 0.72 min (QC Method 2)
Synthesis analogous to 25c, using 24b.
NMR (CDCl3) δ 7.85 (1H, d, J 2.8), 7.44 (1H, dd, J 8.8, 2.5), 6.91 (1H, d, J 8.8), 6.12 (1H, s), 4.16 (2H, t, J 5.6), 3.92 (3H, s), 3.43 (2H, dd, J 11.3, 6.0), 2.98 (3H, s), 2.18-2.09 (2H, m);
MS (m/e) 320 [M−H]−, Rt 0.75 min (QC Method 2)
Synthesis analogous to 25c, using 24b and ethylsulfonyl chloride.
NMR (CDCl3) δ 7.89-7.87 (1H, m), 7.50-7.42 (1H, m), 6.93 (1H, d, J 8.8), 6.35 (1H, t, J 5.8), 4.16 (2H, t, J 5.5), 3.90 (3H, s), 3.47-3.40 (2H, m), 3.10 (2H, q, J 7.3), 2.20-2.11 (2H, m), 1.36 (3H, t, J 7.3);
MS (m/e) 334 [M−H]−, Rt 0.79 min (QC Method 2)
A solution of 24a (0.9 g, 3.4 mmol) in DCM (10 ml) was treated with TEA (8.9 mmol) and methylisocyanate (5.4 mmol). After 4 hr, 1M HCl (5 ml) was added and the organic phase was removed and washed with saturated NaHCO3 (5 ml) and dried to give the product as a white solid. This was used without further purification
(CDCl3) δ 7.77 (1H, d, J 2.8), 7.42 (1H, dd, J 8.8, 2.8), 6.92 (1H, d, J 8.8), 5.71 (1H, br t, J 5.1), 4.61-4.48 (1H, m), 4.10 (2H, t, J 5.1), 3.89 (3H, s), 3.65-3.58 (2H, m), 3.28-3.14 (2H, m), 1.11 (3H, t, J 7.3);
MS (m/e) 301 [M+H]+, Rt 0.73 min (QC Method 2)
To a solution of the methyl ester (1.0 g, 3.5 mmol) in THF (2 mL) was added 1M NaOH and then the suspension was stirred for 4 hr, or until completion. The reaction mixture was acidified with 1M HCl until ˜pH 1 and then extracted with EtOAc (2×20 ml) and dried to provide the carboxylic acid. When required, the product was partially purified by solvating the product in DCM, washing with 1M NaOH, followed by acidification of the basic mixture and extractions with EtOAc.
Following General Method D, 25a (1.0 g, 3.8 mmol) provided the product as a white solid and was used without further purification; (1.0 g, quantitative)
NMR (CDCl3) δ 8.04 (1H, d, J 2.6), 7.50 (1H, dd, J 8.8, 2.8), 6.99 (1H, d, J 9.2), 6.59 (1H, br s), 4.30-4.23 (2H, m), 3.78-3.69 (2H, m), 2.06 (3H, s);
MS (m/e) 258 [M+H]+, Rt 0.56 min (QC Method 2)
Following General Method D, 25b (1.1 g, 3.8 mmol) provided the product as a pale brown solid and was used without further purification; (1.1 g, quantitative)
NMR (CDCl3) δ 9.65 (1H, br s), 7.98 (1H, d, J 2.8), 7.48 (1H, dd, J 8.8, 2.8), 6.97 (1H, d, J 8.8), 6.86-6.66 (1H, m), 4.24 (2H, t, J 5.2), 3.77-3.71 (2H, m), 2.30 (2H, q, J 7.6), 1.17 (3H, t, J 7.6);
MS (m/e) 272 [M+H]+, Rt 0.61 min (QC Method 2)
Following General Method D, 25c (1.0 g, 3.4 mmol) provided the product as a white solid and was used without further purification; (0.80 g, 80%)
NMR (CDCl3) δ 8.03 (1H, d, J 2.5), 7.53 (1H, dd, J 8.8, 2.8), 6.99 (1H, d, J 8.8), 5.81 (1H, br s), 4.30 (2H, t, J 5.1), 3.61 (2H, t, J 5.1), 3.06 (3H, s)
Following General Method D, 25d (1.0 g, 3.4 mmol) provided the product as a white solid and was used without further purification; (0.92 g, 95%)
NMR δ 12.93 (1H, br s), 7.63 (1H, d, J 2.8), 7.54 (1H, dd, J 9.2, 2.8), 7.22 (1H, d, J 9.2), 6.05 (1H, t, J 5.5), 5.95 (1H, t, J 5.5), 4.02 (2H, t, J 5.8), 3.41-3.27 (2H, m), 3.08-2.92 (2H, m), 0.98 (3H, t, J 7.3);
MS (m/e) 287 [M+H]+, Rt 0.61 min (QC Method 2)
Following General Method D, 26a (0.27 g, 0.9 mmol) provided the product as a grey solid and was used without further purification; (0.19 g, 73%)
NMR (CDCl3) δ 8.07 (1H, d, J 2.8), 7.52-7.44 (2H, m), 6.95 (1H, d, J 8.8), 4.20 (2H, t, J 5.7), 3.61-3.51 (2H, m), 2.15 (3H, s), 2.14-2.06 (2H, m);
MS (m/e) 272 [M+H]+, Rt 0.61 min (QC Method 2)
Following General Method D, 26b (0.70 g, 2.3 mmol) provided the product as a brown solid and was used without further purification; (0.67 g, quantitative)
NMR (CDCl3) δ 8.03 (1H, d, J 2.8), 7.48 (1H, dd, J 8.8, 2.8), 6.95 (1H, d, J 9.2), 4.23-4.06 (2H, m), 3.61-3.46 (2H, m), 2.45-2.28 (2H, m), 2.16-1.99 (2H, m), 1.17 (3H, t, J 7.0);
MS (m/e) 286 [M+H]+, Rt 0.65 min (QC Method 2)
Following General Method D, 26c (0.075 g, 0.2 mmol) provided the product as a colourless oil and was used without further purification; (0.065 g, 87%)
NMR (CDCl3) δ 8.43 (1H, br s), 7.85 (1H, d, J 2.8), 7.35 (1H, dd, J 8.8, 2.5), 6.86 (1H, d, J 9.2), 6.00 (1H, br s), 4.14 (2H, t, J 5.7), 3.34-3.20 (2H, m), 2.88 (3H, s), 2.11-1.96 (2H, m);
MS (m/e) 306 [M−H]−, Rt 0.63 min (QC Method 2)
Following General Method D, 26d (0.51 g, 1.5 mmol) provided the title compound as a grey solid and was used without further purification; (0.49 g, quantitative)
NMR (CDCl3) δ 7.99 (1H, d, J 2.8), 7.45 (2H, dd, J 9.2, 2.8), 6.93 (1H, d, J 8.8), 6.19 (1H, br s), 6.18 (1H, t, J 5.8), 4.23 (2H, t, J 5.8), 3.37 (2H, dd, J 11.4, 5.8), 3.07 (2H, q, J 7.3), 2.19-2.10 (2H, m), 1.35 (3H, t, J 7.3);
MS (m/e) 320 [M−H]−, Rt 0.67 min (QC Method 2)
A suspension of 19a (1.70 g, 9.1 mmol), 2-chloroethyl methyl sulfide (1.10 g, 11 mmol) and K2CO3 (2.5 g, 18 mmol) in acetone (50 ml) was heated at reflux overnight. The reaction was cooled to RT, filtered and concentrated. Column chromatography (SiO2; 1:1 PE:ether) gave the title compound; (1.2 g, 4.6 mmol)
NMR (CDCl3) δ 7.76 (1H, d, J 2.8), 7.40 (1H, dd, J 8.8, 2.8), 6.92 (1H, d, J 8.8), 4.20 (2H, t, J 6.9), 3.88 (3H, s), 2.92 (2H, t, J 6.9), 2.22 (3H, s)
A suspension of 29 (1.2 g, 4.6 mmol) in 3:1 MeOH:water (60 ml) was treated portionwise with Oxone® (10 g, 16 mmol) and stirred overnight. The MeOH was removed under vacuum and the aqueous washed with DCM. The organics were dried and concentrated to give the title compound as a white solid; (1.11 g, 3.8 mmol)
NMR (CDCl3) δ 7.82 (1H, d, J 2.8), 7.45 (1H, dd, J 8.8, 2.8), 6.96 (1H, d, J 8.8), 4.47 (2H, t, J 5.2), 3.87 (3H, s), 3.47 (2H, t, J 5.2), 3.16 (3H, s)
A solution of 30 (1.11 g, 3.8 mmol) in THF (50 ml) was treated with 1M LiOH (25 ml) and stirred at RT for 24 hrs. The mixture was extracted with ether, the organics discarded, and the aqueous acidified. This was washed with DCM, the organics dried and concentrated to give the title compound as a white solid; (1.02 g, 3.7 mmol)
NMR δ 7.65 (1H, d, J 2.8), 7.57 (1H, dd, J 8.8, 2.8), 7.22 (1H, d, J 8.8), 4.38 (2H, t, J 5.3), 3.61 (2H, t, J 5.3), 3.12 (3H, s);
MS (m/e) No ion observed, Rt 1.18 min (QC Method 1)
A solution of 2-chloro-5-fluoronicotinic acid (18.7 g, 0.11 mol) and 2-methoxyethanol (25.4 g, 0.33 mol) in THF (1.5 L) was cooled to 0° C. and treated portionwise with NaH (60% dispersion in mineral oil, 17.2 g, 0.43 mol) and stirred under N2 for 2 days. The reaction was diluted with 1M NaOH and extracted with ether, which was discarded. The aqueous was acidified with conc. HCl and extracted with DCM. The organics were dried and is concentrated to give the title compound as an off-white solid; (19.93, 92.7 mmol)
Further purification, where necessary, was by column chromatography (SiO2; 1:99 MeOH:DCM)
NMR δ 8.34 (1H, d, J 3.2), 8.01 (1H, dd, J 8.2, 3.2), 4.44 (2H, m), 3.67 (2H, m), 3.31 (3H, s);
MS (m/e) 216 [M+H]+, Rt 1.14 min (QC Method 1)
Prepared according to General Method E, using 2-chloronicotinic acid
NMR (CDCl3) δ 8.47 (1H, dd, J 7.6, 2.2), 8.38 (1H, dd, J 5.0, 1.9), 7.15 (1H, dd, J 7.6, 4.7), 4.75 (2H, m), 3.83 (2H, m), 3.48 (3H, s);
MS (m/e) 198 [M+H]+, Rt 0.56 min (QC Method 2)
Prepared according to general method E, using 2,5-dichloronicotinic acid
NMR (CDCl3) δ 8.37 (1H, dd, J 2.8, 1.8), 8.11 (1H, dd, J 2.8, 1.8), 4.43 (2H, m), 3.64 (2H, m), 3.28 (3H, s);
MS (m/e) 230 [M−H]−, Rt 1.24 min (QC Method 1)
Prepared according to General Method E, using 5-bromonicotinic acid
NMR δ 8.42 (1H, d, J 2.5), 8.19 (1H, d, J 2.8), 4.43 (2H, m), 3.65 (2H, m), 3.29 (3H, s);
MS (m/e) 178 [M+H]+, Rt 0.73 min (QC Method 2)
Prepared according to General Method E, using 2-ethoxyethanol
NMR δ 13.23 (1H, br), 8.32 (1H, d, J 3.2), 7.99 (1H, dd, J 8.2, 3.2), 4.40 (2H, m), 3.68 (2H, m), 3.49 (2H, q, J 7.0), 1.08 (3H, t, J 7.0);
MS (m/e) 230 [M+H]+, Rt 1.23 min (QC Method 1)
Prepared according to general method E, using (S)-2-methoxypropanol
NMR (CDCl3) δ 8.19-8.25 (2H, m), 4.67 (1H, dd, J 11.1, 3.2), 4.36 (1H, dd, J 11.1, 7.3), 3.81 (1H, m), 3.45 (3H, s), 1.30 (3H, d, J 6.3)
Prepared according to general Method E, using 2-isopropoxyethanol
NMR (CDCl3) δ 8.20-8.25 (2H, m), 4.69 (2H, m), 3.84 (2H, m), 3.71 (1H, m), 1.23 (6H, d, J 6.0)
Prepared according to General Method E, using 2-(2-methoxyethoxy)ethanol
NMR (CDCl3) δ 8.19-8.25 (2H, m), 4.73 (2H, m), 3.93 (2H, m), 3.74 (2H, m), 3.62 (2H, m), 3.42 (3H, s);
MS (m/e) 260 [M+H]+, Rt 0.66 min (QC Method 2)
Prepared according to General Method E, using 3-methoxypropanol
NMR (CDCl3) δ 8.19-8.25 (2H, m), 4.66 (2H, t, J=5.7 Hz), 3.66 (2H, t, J=5.7 Hz), 3.40 (3H, s), 2.15 (2H, m)
Prepared according to General Method E, using 3-ethoxypropanol
NMR (CDCl3) δ 8.20-8.26 (2H, m), 4.68 (2H, t, J 6.0), 3.67 (2H, m), 3.55 (2H, q, J 7.0), 2.16 (2H, m), 1.24 (3H, t, J 7.0)
Prepared according to General Method E, using 2-chloro-4-methylnicotinic acid
NMR (CDCl3) δ 8.36 (1H, d, J 7.9), 6.99 (1H, d, J 7.9), 4.74 (2H, m), 3.81 (2H, m), 3.46 (3H, s), 2.54 (3H, s)
After 30 min, a stirred solution of carboxylic acid (0.30 mmol), HBTU (0.36 mmol) and TEA (0.72 mmol) in DMF (3 ml) was treated with a solution PMB-benzodiazepine amine (0.24 mMol) in DMF (3 ml) and stirred overnight.
The reaction mixture was concentrated, the residue taken into DCM and washed with saturated NaHCO3 solution and 2M HCl. The organics were dried and concentrated.
The resulting residue was taken into anisole (3 ml), treated with aluminium trichloride (7.5 mmol) and stirred overnight at RT. This was diluted with EtOAc, basified with saturated Na2CO3 and the resulting slurry filtered through Celite®. The organics were separated, dried and concentrated. Purification by column chromatography gave the final compound.
is After 30 min, a solution of carboxylic acid (0.3 mmol), HBTU (0.36 mmol) and TEA (0.72 mmol) in DMF (3 ml) was treated with benzodiazepine amine (0.26 mmol) and the reaction stirred at RT overnight. After concentration, the reaction residue was taken into DCM, washed with saturated Na2CO3 solution and 2M HCl. The organics were dried and concentrated. Purification by column chromatography gave the final compound.
Prepared according to General Method G, using 9 and 18a. Purification by preparative HPLC
NMR δ 11.27 (1H, s), 9.57 (1H, d, J 7.5), 7.89 (1H, d, J 1.8), 7.87 (1H, d, J 3), 7.72 (1H, d, J 1.8), 7.55-7.63 (2H, m), 7.18-7.31 (4H, m), 5.55 (1H, d, J 7.5), 4.25 (2H, m), 3.52 (2H, t, J 6.2), 3.33 (3H, s), 2.11 (2H, m);
MS (m/e) 582 [M+H]+, Rt 1.15 min (QC Method 2)
Prepared according to General Method F, using 8b and 18b. Purification by column chromatography (SiO2; DCM→200:8:1 DCM:EtOH:NH3)
NMR δ 11.23 (1H, br), 9.55 (0.5H, d, J 7.6), 9.47 (0.5H, d, J 7.6), 7.92 (1H, d, J 2.2), 7.86 (1H, m), 7.74 (1H, d, J 1.9), 7.56-7.66 (2H, m), 7.17-7.33 (4H, m), 5.57 (0.5H, d, J 7.6), 5.55 (0.5H, d, J 7.6), 4.16 (2H, m), 3.82 (1H, m), 3.19 (1.5H, s), 3.17 (1.5H, s), 1.17 (3H, m);
MS (m/e) 582 [M+H]+, Rt 3.62 min (QC Method 4)
Prepared according to General Method F, using 8b and 18c. Purification by column chromatography (SiO2; PE→EtOAc)
NMR δ 11.25 (1H, s), 9.56 (1H, d, J 7.6), 7.93 (1H, d, J 1.9), 7.91 (1H, d, J 2.8), 7.76 (1H, d, J 1.9), 7.59-7.66 (2H, m), 7.18-7.35 (4H, m), 5.59 (1H, d, J 7.6), 3.82 (2H, m), 3.40 (2H, m), 1.10 (2H, t, J 7.0), 0.93 (3H, t, J 7.0);
MS (m/e) 580 [M+H]+, Rt 3.59 min (QC Method 4)
Prepared according to General Method F, using 8b and 18d. Purification by column chromatography (SiO2; PE→EtOAc)
NMR δ 10.71 (1H, br), 9.62 (0.5H, d, J 7.0), 9.58 (0.5H, d, J 7.0), 7.84-7.90 (2H, m), 7.52-7.70 (3H, m), 7.14-7.37 (4H,m), 5.56 (0.5H, d, J 7.3), 5.54 (0.5H, d, J 7.3), 4.88 (1H, m), 3.72 (0.5H, m), 3.68 (0.5H, m), 3.59 (0.5H, m), 3.54 (0.5H, m), 3.23 (1.5H, s), 3.20 (1.5H, s), 1.36 (1.5H, d, J 2.5), 1.34 (1.5H, d, J 2.5);
MS (m/e) 580 [M+H]+, Rt 3.59, 3.62 min (QC Method 4)
Prepared according to General Method F, using 8b and 18e. Purification by column chromatography (SiO2; DCM→200:8:1 DCM:EtOH:NH3)
NMR δ 11.25 (1H, s), 9.56 (1H, d, J 7.6), 7.92 (1H, d, J 2.2), 7.89 (1H, d, J 2.8), 7.75 (1H, d, J 2.2), 7.54-7.64 (2H, m), 7.17-7.33 (4H, m), 5.56 (1H, d, J 7.6), 4.33 (2H, m), 3.84 (2H, m), 3.46 (2H, m), 3.22 (2H, m), 3.03 (3H, s);
MS (m/e) 610 [M+H]+, Rt 3.41 min (QC Method 4)
Prepared according to General Method F, using 8b and 18f. Purification by preparative HPLC
NMR δ 11.21 (1H, br), 9.53 (1H, d, J 7.6), 7.91 (2H, m), 7.74 (1H, d, J 2.2), 7.63 (2H, m), 7.31-7.19 (4H, m), 5.58 (1H, d, J 7.6), 4.36 (2H, m), 3.84 (2H, m), 3.15 (2H, dd, J 7.0, 2.2), 1.69 (1H, m), 0.75 (6H, d, J 6.6);
MS (m/e) 608 [M+H]+, Rt 3.93 min (QC Method 4)
Prepared according to General Method F, using 8b and 18g. Purification by preparative HPLC
NMR δ 11.21 (1H, br), 9.56 (1H, d, J 7.6), 7.91 (2H, m), 7.75 (1H, d, J 1.9), 7.68-7.59 (2H, m), 7.36-7.19 (4H, m), 5.60 (1H, d, J 7.6), 4.36 (2H,m), 3.86 (2H, m), 3.72 (2H, m), 3.50 (2H, m), 3.31 (2H, m), 3.20 (2H, m), 1.00 (3H, t, J 7.3);
MS (m/e) 623 [M+H]+, Rt 3.55 min (QC Method 4)
Prepared according to General Method F, using 8b and 18h. Purification by preparative HPLC
NMR δ 11.20 (1H, br), 9.55 (1H, d J 7.3), 7.91 (2H, m), 7.73 (1H, d, J 1.9), 7.63 (2H, m), 7.20-7.30 (4H, m), 5.58 (1H, d, J 7.3), 4.36 (2H, m), 3.82 (2H, m), 1.34 (2H, m), 1.12-1.04 (4H, m), 0.75 (3H, m);
MS (m/e) 622 [M+H]+, Rt 4.06 min (QC Method 4)
Prepared according to General Method F, using 8b and 18i. Purification by column chromatography (SiO2; PE→EtOAc)
NMR δ 11.11 (1H, br), 9.40 (0.5H, d, J 7.0), 9.38 (0.5H, d, J 7.0), 7.83-7.88 (2H, m), 7.69 (1H, d, J 1.9), 7.53-7.66 (2H, m), 7.15-7.34 (4H, m), 5.57 (0.5H, d, J 7.5), 5.56 (0.5H, d, J 7.5), 4.15-4.29 (3H, m), 3.72 (1H, m), 3.56 (1H, m), 2.01 (1H, m), 1.66-1.85 (3H, m);
MS (m/e) 592 [M+H]+, Rt 3.58 min (QC Method 4)
Prepared according to General Method F, using 8b and 18j. Purification by preparative HPLC
NMR δ 11.24 (1H, br), 9.55 (1H, d, J 7.6), 7.91 (1H, d, J 1.9), 7.88 (1H, d, J 2.8), 7.73 (1H, d, J 1.9), 7.57-7.63 (2H, m),7.14-7.32 (4H, m), 5.55 (1H, d, J 7.6), 4.32 (2H, m), 3.81 (2H, m), 1.28 (2H, m), 1.02-1.16 (4H, m);
MS (m/e) 608 [M+H]+, Rt 3.76 min (QC Method 3)
Prepared according to General Method F, using 8b and 18k. Purification by preparative HPLC
NMR δ 11.20 (1H, br), 9.60 (1H, d, J 7.6), 7.88 (1H, d, J 2.8), 7.86 (1H, d, J 1.9), 7.71 (1H, d, J 1.9), 7.56-7.65 (2H, m), 7.10-7.30 (6H, m), 6.82-6.91 (3H, m), 5.52 (1, d, J 7.6), 4.58 (2H, m), 4.43 (2H, m);
MS (m/e) 630 [M+H]+, Rt 1.09 min (QC Method 2)
Prepared according to General Method F, using 8b and 5-chloro-2-(3-(dimethylamino)propoxy)benzoic acid. Purification by preparative HPLC
NMR δ 11.27 (1H, Br), 9.52 (1H, d, J 7.3), 7.90 (1H, d, J 1.9), 7.86 (1H, d, J 2.5), 7.72 (1H, d, J 1.9), 7.66-7.55 (2H, m), 7.33-7.15 (4H, m), 5.55 (1H, d, J 7.3), 4.23 (2H, m), 2.57 (2H, m), 2.16 (6H, s), 2.05 (2H, m);
MS (m/e) 593 [M+H]+, Rt 2.51 min (QC Method 4)
Prepared according to General Method F, using 8b and 18l. Purification by preparative HPLC
NMR δ 11.22 (1H, br), 9.58 (1H, d, J 7.6), 7.89-7.94 (2H, m), 7.74 (1H, d, J 1.9), 7.58-7.69 (2H, m), 7.20-7.36 (4H, m), 5.60 (1H, d, J 7.6), 4.36 (2H, m), 3.89 (2H, m), 3.51 (2H, m), 2.38 (2H, m), 2.09 (6H, s);
MS (m/e) 623 [M+H]+, Rt 0.79 min (QC Method 2)
Prepared according to General Method F, using 8b and 21a. Purification by column chromatography (SiO2; DCM→200:8:1 DCM:EtOH:NH3)
NMR δ 11.26 (1H, s), 9.61 (1H, d, J 7.3), 7.93 (1H, d, J 1.9), 7.90 (1H, d, J 2.8), 7.75 (1H, d, J 1.9), 7.58-7.69 (2H, m), 7.18-7.36 (4H, m), 5.58 (1H, d, J 7.3), 4.36 (2H, m), 3.81 (2H, m), 3.23 (3H, s);
MS (m/e) 568 [M+H]+, Rt 3.31 min (QC Method 3)
Prepared according to General Method G, using 9 and 21b. Purification by preparative HPLC
NMR δ 11.21 (1H, s), 9.59 (1H, d, J 7.3), 7.96 (1H, dd, J 7.6, 1.6), 7.91 (1H, d, J 1.9), 7.74 (1H, d, J 1.9), 7.49-7.66 (2H, m), 7.30 (1H, d, J 8.2), 7.15-7.25 (3H, m), 7.08 (1H, m), 5.57 (1H, d, J 7.6), 4.32 (2H, m), 3.80 (2H, m), 3.21 (3H, s);
MS (m/e) 534 [M+H]+, Rt 1.03 min (QC Method 2)
Prepared according to General Method G, using 9 and 21c. Purification by preparative HPLC
NMR δ 11.26 (1H, br, s), 9.68 (1H, d, J 7.3), 7.93 (1H, d, J 1.9), 7.76 (1H, d, J 1.9), 7.61-7.72 (2H, m), 7.44 (1H, m), 7.18-7.36 (4H, m), 5.58 (1H, d, J 7.6), 4.34 (2H, m), 3.81 (2H, m), 3.23 (3H, s);
MS (m/e) 550 [M+H]+, Rt 1.07 min (QC Method 2)
Prepared according to General Method G, using 9 and 21d. Purification by column chromatography (SiO2; DCM→200:8:1 DCM:EtOH:NH3)
NMR δ 11.21 (1H, s), 9.60 (1H, d, J 7.3), 7.91 (1H, d, J 1.9), 7.77 (1H, d, J 2.2), 7.73 (1H, d, J 1.9), 7.62 (1H, m), 7.09-7.36 (5H, m), 5.56 (1H, d, J 7.6), 4.28 (2H, m), 3.79 (1H, m), 3.20 (3H, s), 2.27 (3H, s);
MS (m/e) 546 [M+H]+, Rt 3.19 min (QC Method 3)
Prepared according to General Method G, using 9 and 21e. Purification by preparative HPLC
NMR δ 11.23 (1H, br), 9.56 (1H, d, J 7.3), 8.54 (1H, d, J 2.2), 8.15 (1H, dd, J 8.5, 2.2), 7.92 (1H, d, J 1.9), 7.75 (1H, d, J 2.2), 7.65 (1H, m), 7.21-7.40 (5H, m), 5.61 (1H, d, J 7.3), 4.45 (2H, m), 3.85 (2H, m), 3.25 (3H, s), 2.58 (3H, s);
MS (m/e) 574 [M+H]+, Rt 2.90 min (QC Method 3)
Prepared according to General Method G, using 9 and 21f. Purification by preparative HPLC
NMR δ 11.24 (1H, br), 9.63 (1H, d, J 7.3), 7.91 (1H, d, J 1.9), 7.83 (1H, d, J 3.2), 7.74 (1H, d, J 2.2), 7.55-7.66 (2H, m), 7.16-7.39 (4H, m), 5.56 (1H, d, J 7.3), 4.37 (2H, m), 3.80 (2H, m), 3.21 (3H, s);
MS (m/e) 616 [M+H]+, Rt 1.15 min (QC Method 2)
Prepared according to General Method G, using 9 and 21g. Purification by preparative HPLC
NMR δ 11.23 (1H, br), 9.58 (1H, d, J 7.3), 8.00 (1H, d, J 2.5), 7.91 (1H, d, J 1.9), 7.73 (1H, d, J 1.9), 7.57-7.70 (2H, m), 7.17-7.33 (4H, m), 5.55 (1H, d, J 7.5), 4.33 (2H, m), 3.79 (2H, m), 3.20 (3H, s);
MS (m/e) 612 [M+H]+, Rt 1.13 min (QC Method 2)
Prepared according to General Method F, using 8b and 27a. Purification by reverse phase chromatography (C18, MeCN:H2O 7:13→4:1 over 30 min)
NMR δ 11.31 (1H, s), 9.58 (1H, d, J 7.6), 7.93-7.89 (2H, m), 7.86 (1H, d, J 2.8), 7.74 (1H, d, J 1.9), 7.70-7.55 (2H, m), 7.39-7.17 (4H, m), 5.61 (1H, d, J 7.6), 4.26-4.19 (2H, m), 3.65-3.51 (2H, m), 1.77 (3H, s);
MS (m/e) 595 [M+H]+, Rt 0.93 min (QC Method 2)
Prepared according to General Method F, using 8b and 27b. Purification by reverse phase chromatography (C18, MeCN:H2O 7:13→4:1 over 30 min)
NMR δ 11.33 (1H, br s), 9.59 (1H, d, J 7.3), 7.91 (1H, d, J 1.9), 7.86 (1H, d, J 2.8), 7.84-7.76 (1H, m), 7.74 (1H, d, J 2.2), 7.71-7.61 (1H, m), 7.60 (1H, dd, J 8.8, 2.8), 7.39-7.17 (4H, m), 5.61 (1H, d, J 7.6), 4.24 (2H, t, J 5.4), 3.59 (2H, t, J 5.4), 2.03 (2H, q, J 7.6), 0.92 (3H, t, J 7.6);
MS (m/e) 609 [M+H]+, Rt 0.96 min (QC Method 2)
Prepared according to General Method F, using 8b and 27c. Purification by reverse phase chromatography (C18, MeCN:H2O 7:13→4:1 over 30 min)
NMR δ 11.32 (1H, br s), 9.58 (1H, d, J 7.3), 7.91 (1H, d, J 1.9), 7.85 (1H, d, J 2.8), 7.74 (1H, d, J 1.9), 7.69-7.57 (2H, m), 7.37-7.15 (5H, m), 5.58 (1H, d, J 7.6), 4.36-4.24 (2H, m), 3.60-3.50 (2H, m), 2.94 (3H, s);
MS (m/e) 631 [M+H]+, Rt 0.95 min (QC Method 2)
Prepared according to General Method F, using 8b and 27d. Purification by reverse phase chromatography (C18, MeCN:H2O 7:13→4:1 over 30 min)
NMR δ 11.34 (1H, s), 9.66 (1H, d, J 7.3), 7.91 (1H, d, J 1.9), 7.88 (1H, d, J 2.8), 7.73 (1H, d, J 1.9), 7.70-7.62 (1H, m), 7.59 (1H, dd, J 8.8, 2.8), 7.38-7.18 (4H, m), 6.04 (1H, t, J 6.0), 5.96 (1H, t, J 5.5), 5.58 (1H, d, J 7.0), 4.28-4.11 (2H, m), 3.64-3.53 (2H, m), 3.05-2.92 (2H, m), 0.96 (3H, t, J 7.1);
MS (m/e) 624 [M+H]+, Rt 0.92 min (QC Method 2)
Prepared according to General Method F, using 8b and 28a. Purification by reverse phase chromatography (C18, MeCN:H2O 7:13→4:1 over 30 min)
NMR δ 11.27 (1H, s), 9.63 (1H, d, J 7.0), 7.93-7.80 (3H, m), 7.73 (1H, d, J 1.9), 7.67-7.53 (2H, m), 7.35-7.11 (4H, m), 5.54 (1H, d, J 7.3), 4.25-4.14 (2H, m), 3.43-3.18 (2H, m), 2.07-1.92 (2H, m), 1.76 (3H, s);
MS (m/e) 609 [M+H]+, Rt 0.92 min (QC Method 2)
Prepared according to General Method F, using 8b and 28b. Purification by reverse phase chromatography (C18, MeCN:H2O 7:13→4:1 over 30 min)
NMR δ 11.24 (1H, br s), 9.62 (1H, d, J 7.3), 7.90 (1H, d, J 2.2), 7.88 (1H, d, J 2.8), 7.79-7.70 (2H, m), 7.69-7.57 (2H, m), 7.37-7.16 (4H, m), 5.57 (1H, d, J 7.3), 4.27-4.18 (2H, m), 3.30-3.18 (2H, m), 2.10-1.97 (4H, m), 0.97 (3H, t, J 7.6);
MS (m/e) 623 [M+H]+, Rt 0.96 min (QC Method 2)
Prepared according to General Method F, using 8b and 28c. Purification by reverse phase chromatography (C18, MeCN:H2O 7:13→4:1 over 30 min)
NMR δ 11.30 (1H, br s), 9.60 (1H, d, J 7.3), 7.92 (1H, d, J 1.9), 7.86 (1H, d, J 2.8), 7.75 (1H, d, J 1.9), 7.69-7.58 (2H, m), 7.37-7.16 (4H, m), 7.13-7.04 (1H, m), 5.57 (1H, d, J 7.3), 4.33-4.23 (2H, m), 3.27-3.07 (2H, m), 2.82 (3H, s), 2.16-2.02 (2H, m);
MS (m/e) 645 [M+H]+, Rt 0.96 min (QC Method 2)
Prepared according to General Method F, using 8b and 28d. Purification by reverse phase chromatography (C18, MeCN:H2O 7:13→4:1 over 30 min)
NMR δ 11.25 (1H, br s), 9.52 (1H, d, J 7.3), 7.92 (1H, d, J 1.9), 7.85 (1H, d, J 2.8), 7.74 (1H, d, J 1.9), 7.69-7.54 (2H, m), 7.38-7.15 (4H, m), 7.10-6.99 (1H, m), 5.57 (1H, d, J 7.6), 4.34-4.22 (2H, m), 3.38-3.05 (2H, m), 2.89 (2H, q, J 7.3), 2.14-1.98 (2H, m), 1.10 (3H, t, J 7.3);
MS (m/e) 659 [M+H]+, Rt 0.98 min (QC Method 2)
Prepared according to General Method F, using 8b and 31. Purification by column chromatography (SiO2; PE→EtOAc)
NMR δ 11.21 (1H, br), 9.47 (1H, d, J 7.3), 7.86 (1H, d, J 1.9), 7.78 (1H, d, J 2.8), 7.68 (1H, d, J 1.9), 7.55-7.66 (2H, m), 7.30-7.36 (2H, m), 7.15-7.26 (2H, m), 5.55 (1H, d, J 7.3), 4.58 (2H, t, J 5.7), 3.77 (2H, t, J 5.7), 3.01 (3H, s);
MS (m/e) 614 [M+H]+, Rt 3.20 min (QC Method 4)
After 30 min, a solution of 32a (2.50 g, 11.6 mmol), HBTU (4.85 g, 12.8 mmol) and TEA (4.04 ml, 29.0 mmol) in DMF (75 ml) was treated with 9 (4.07 g, 11.5 mmol) and the reaction stirred at RT for 72 hrs. The resulting precipitate was collected by filtration and washed with water and ether before being air dried. (Yield 3.95 g) The reaction liquors were concentrated and the residue was taken into DCM, washed with saturated Na2CO3 solution, 2M HCl and brine. The organics were dried and concentrated. Purification by column chromatography (SiO2; DCM→200:8:1 DCM:EtOH:NH3) gave a second crop of compound (Yield 0.92 g)
Overall yield 4.87 g, 8.85 mmol;
NMR δ 11.28 (1H, br), 9.65 (1H, d, J 7.3), 8.42 (1H, d, J 3.2), 8.17 (1H, dd, J 8.5, 3.2), 7.91 (1H, d, J 1.9), 7.74 (1H, d, J 1.9), 7.65 (1H, m), 7.19-7.35 (3H, m), 5.57 (1H, d, J 7.0), 4.59 (2H, m), 3.83 (2H, m), 3.27 (3H, s);
MS (m/e) 553 [M+H]+, Rt 3.15 min (QC Method 3)
Prepared according to General Method G, using 9 and 32b. Purification by column chromatography (SiO2; DCM→200:8:1 DCM:EtOH:NH3)
NMR δ 11.25 (1H, br), 9.58 (1H, d, J 7.3), 8.33-8.41 (2H, m), 7.91 (1H, d, J 1.9), 7.74 (1H, d, J 1.9), 7.65 (1H, m), 7.33 (1H, d, J 7.9), 7.18-7.26 (3H, m), 5.58 (1H, d, J 7.3), 4.62 (2H, m), 3.84 (2H, m), 3.27 (3H, s);
MS (m/e) 535 [M+H]+, Rt 2.94 min (QC Method 3)
Prepared according to General Method G, using 9 and 32c. Purification by preparative HPLC
NMR δ 11.26 (1H, br), 9.57 (1H, d, J 7.3), 8.43 (1H, d, J 2.9), 8.26 (1H, d, J 2.9), 7.89 (1H, d, J 1.9), 7.72 (1H, d, J 1.9), 7.62 (1H, m), 7.31 (1H, d, J 7.9), 7.16-7.26 (2H, m), 5.54 (1H, d, J 7.0), 4.57 (2H, m), 3.80 (2H, m), 3.25 (3H, s);
MS (m/e) 567 [M+H]+, Rt 3.54 min (QC Method 4)
Prepared according to General Method G, using 9 and 32d. Purification by trituration with diethyl ether.
NMR δ 11.25 (1H, br), 9.55 (1H, d, J 7.0), 8.50 (1H, d, J 2.5), 8.36 (1H, d, J 2.5), 7.89 (1H, d, J 1.9), 7.72 (1H, d, J 2.2), 7.62 (1H, m), 7.31 (1H, d, J 7.9), 7.16-7.23 (2H, m), 5.54 (1H, d, J 7.3), 4.57 (2H, m), 3.80 (2H, m), 3.24 (3H, s);
MS (m/e) 613 [M+H]+, Rt 3.40 min (QC Method 3)
Prepared according to General Method G, using 9 and 32e. Purification by preparative HPLC
NMR δ 11.35 (1H, br), 9.66 (1H, d, J 7.3), 8.48 (1H, d, J 3.2), 8.23 (1H, dd, J 8.5, 3.2), 7.98 (1H, d, J 1.9), 7.82 (1H, d, J 1.9), 7.70 (1H, m), 7.38 (1H, d, J 7.9), 7.23-7.33 (2H, m), 5.63 (1H, d, J 7.3), 4.62 (2H, m), 3.88 (2H, m), 3.49 (2H, q, J 7.0), 1.01 (3H, t, J 7.0);
MS (m/e) 565 [M+H]+, Rt 3.46 min (QC Method 4)
Prepared according to General Method G, using 9 and 32f. Purification by column chromatography (SiO2; DCM→200:8:1 DCM:EtOH:NH3)
NMR δ 11.27 (1H, br), 9.58 (0.5H, d, J 7.9), 9.54 (0.5H, d, J 7.7), 8.40 (1H, d, J 3.2), 8.16 (0.5H, dd, J 3.2, 1.3), 8.12 (0.5H, dd, J 3.2, 1.3), 7.91 (1H, m), 7.74 (1H, d, J 1.9), 7.63 (1H, m), 7.31 (1H, d, J 8.2), 7.15-7.26 (2H, m), 5.56 (0.5H, d, J 7.6), 5.55 (0.5H, d, J 7.3), 4.32-4.42 (2H, m), 3.83 (1H, m), 3.20 (3H, d, J 3.2), 1.18 (3H, m);
MS (m/e) 565 [M+H]+, Rt 3.30 min (QC Method 3)
Prepared according to General Method G, using 9 and 32g. Purification by column chromatography (SiO2; DCM→200:8:1 DCM:EtOH:NH3)
NMR δ 11.26 (1H, br), 9.52 (1H, d, J 7.6), 8.41 (1H, d, J 3.2), 8.16 (1H, dd, J 8.5, 3.2), 7.90 (1H, d, J 1.9), 7.76 (1H, d, J 1.9), 7.62 (1H, m), 7.30 (1H, d, J 8.2), 7.18-7.25 (2H, m), 5.56 (1H, d, J 7.6), 4.52 (2H, m), 3.78 (2H, m), 3.55 (1H, m), 0.93 (6H, d, J 6.0);
MS (m/e) 579 [M+H]+, Rt 3.43 min (QC Method 3)
Prepared according to General Method G, using 9 and 32h. Purification by column chromatography (SiO2; DCM→200:8:1 DCM:EtOH:NH3), followed by preparative HPLC NMR δ 11.28 (1H, br), 9.60 (1H, d, J 7.6), 8.41 (1H, d, J 3.2), 8.16 (1H, dd, J 8.5, 3.2), 7.91 (1H, d, J 1.9), 7.75 (1H, d, J 1.9), 7.63 (1H, m), 7.30 (1H, d, J 8.2), 7.16-7.26 m), 5.56 (1H, d, J 7.6), 4.55 (2H, m), 3.86 (2H, m), 3.51 (2H, m), 3.26 (2H, m), 3.06 (3H, s);
MS (m/e) 595 [M+H]+, Rt 3.08 min (QC Method 3)
Prepared according to General Method G, using 9 and 32i. Purification by preparative HPLC
NMR δ 11.30 (1H, br), 9.63 (1H, d, J 7.3), 8.40 (1H, d, J 3.2), 8.14 (1H, dd, J 8.6, 3.2), 7.90 (1H, d, J 1.9), 7.73 (1H, d, J 1.9), 7.62 (1H, m), 7.30 (1H, d, J 7.9), 7.15-7.25 (2H, m), 5.54 (1H, d, J 7.3), 4.51 (2H, m), 3.53 (2H, t, J 6.3), 3.17 (3H, s), 2.09 (2H, m);
MS (m/e) 565 [M+H]+, Rt 3.25 min (QC Method 3)
Prepared according to General Method G, using 9 and 32j. Purification by preparative HPLC
NMR δ 11.30 (1H, br), 9.60 (1H, d, J 7.3), 8.40 (1H, d, J 3.2), 8.14 (1H, dd, J 8.5, 3.2), 7.90 (1H, d, J 1.9), 7.73 (1H, d, J 1.9), 7.63 (1H, m), 7.30 (1H, d, J 7.9), 7.15-7.26 (2H, m), 5.54 (1H, d, J 7.3), 4.52 (2H, m), 3.56 (2H, t, J 6.3), 3.33 (2H, q, J 7.3), 2.08 (2H, m), 1.01 (3H, t, J 7.3);
MS (m/e) 579 [M+H]+, Rt 3.39 min (QC Method 3)
Prepared according to General Method G, using 9 and 32k. Purification by preparative HPLC
NMR δ 11.25 (1H, br), 9.52 (1H, d, J 7.3), 8.22 (1H, d, J 7.6), 7.90 (1H, d, J 1.9), 7.73 (1H, d, J 1.9), 7.62 (1H, m), 7.30 (1H, d, J 7.9), 7.16-7.25 (2H, m), 7.03 (1H, d, J 7.9), 5.53 (1H, d, J 7.3), 4.58 (2H, m), 3.80 (2H, m), 3.24 (3H, s), 2.45 (3H, s);
MS (m/e) 547 [M+H]+, Rt 3.12 min (QC Method 3)
Prepared according to General Method G, using 9 and 2-chloro-5-fluoronicotinic acid. Material used without purification by chromatography
MS (m/e) 513 [M+H]+, Rt 2.81 min (QC Method 3)
A solution of 33 (200 mg, 0.39 mmol) and amine (340 μl, 3.93 mmol) in 4:1 1,4-dioxane:water (2.5 ml) was heated at 160° C. for 20 min under microwave irradiation. The mixture was concentrated and purified by preparative HPLC, unless otherwise stated.
Prepared according to General Method H, using 33 and 2-methoxy-N-methylethanamine
NMR δ 11.19 (1H, br), 9.98 (1H, d, J 8.2), 8.24 (1H, d, J 3.2), 7.93 (1H, d, J 1.9), 7.75 (1H, d, J 1.9), 7.58-7.67 (2H, m), 7.32 (1H, d, J 7.9), 7.14-7.24 (2H, m), 5.52 (1H, d, J 7.9), 3.44-3.54 (4H, m), 3.14 (3H, s), 2.90 (3H, s);
MS (m/e) 564 [M+H]+, Rt 3.30 min (QC Method 4)
Prepared according to General Method H, using 33 and 2-methoxyethanamine
NMR δ 11.17 (1H, br), 9.78 (1H, d, J 7.6), 8.21-8.33 (3H, m), 7.94 (1H, d, J 1.9), 7.76 (1H, d, J 1.9), 7.64 (1H, m), 7.32 (1H, d, J 7.9), 7.16-7.25 (2H, m), 5.55 (1H, d, J 7.3), 3.40-3.51 (4H, m), 3.22 (3H, s);
MS (m/e) 550 [M+H]+, Rt 3.23 min (QC Method 4)
Prepared according to General Method H, using 33 and N-ethyl-2-methoxyethanamine
NMR δ 11.17 (1H, br), 10.44 (1H, d, J 7.9), 8.36 (1H, d, J 3.2), 7.92 (1H, d, J 1.9), 7.78 (1H, dd, J 8.8, 3.2), 7.74 (1H, d, J 1.9), 7.63 (1H, m), 7.31 (1H, d, J 7.9), 7.14-7.25 (2H, m), 5.53 (1H, d, J 7.9), 3.41-3.45 (4H, m), 3.29 (2H, m), 3.09 (3H, s), 0.97 (3H, t, J 7.0);
MS (m/e) 578 [M+H]+, Rt 3.50 min (QC Method 4)
Prepared according to General Method H, using 33 and N-(2-methoxyethyl)propan-2-amine
NMR δ 11.16 (1H, br), 10.70 (1H, d, J 7.3), 8.47 (1H, d, J 3.2), 7.91-7.98 (2H, m), 7.74 (1H, d, J 1.9), 7.62 (1H, m), 7.31 (1H, d, J 8.2), 7.14-7.25 (2H, m), 5.52 (1H, d, J 7.6), 3.48 (2H, m), 3.30-3.37 (3H, m), 3.06 (3H, s), 1.08 (3H, d, J 6.3), 1.00 (3H, d, J 6.3);
MS (m/e) 592 [M+H]+, Rt 3.71 min (QC Method 4)
Prepared according to General Method H, using 33 and 2-ethoxy-N-ethylethanamine
NMR δ 11.28 (1H, br), 10.49 (1H, d, J 7.6), 8.37 (1H, d, J 2.8), 7.92 (1H, d, J 1.9), 7.81 (1H, dd, J 8.5, 3.2), 7.74 (1H, d, J 1.9), 7.63 (1H, m), 7.31 (1H, d, J 8.2), 7.14-7.25 (2H, m), 5.53 (1H, d, J 7.9), 3.37-3.48 (4H, m), 3.20-3.32 (4H, m), 0.98 (3H, t, J 7.0), 0.89 (3H, t, J 7.0);
MS (m/e) 592 [M+H]+, Rt 3.65 min (QC Method 4)
Prepared according to General Method H, using 33 and 2-(cyclopropylmethoxy)-N-methylethanamine
NMR δ 11.15 (1H, br), 9.94 (1H, d, J 7.9), 8.23 (1H, d, J 3.2), 7.91 (1H, d, J 1.9), 7.73 (1H, d, J 1.9), 7.57-7.66 (2H, m), 7.29 (1H, d, J 8.2), 7.12-7.25 (2H, m), 5.51 (1H, d, J 7.9), 3.46-3.54 (4H, m), 3.09 (2H, d, J 6.6), 2.88 (3H, s), 0.84 (1H, m), 0.25-0.33 (2H, m), −0.05-0.03 (2H, m);
MS (m/e) 604 [M+H]+, Rt 3.62 min (QC Method 4)
A solution of 8a (250 mg, 0.56 mmol), 21a (260 mg, 1.11 mmol), HBTU (410 mg, 1.11 mmol) and TEA (200 μl, 1.42 mmol) in DMF (3 ml) was stirred for 18hrs. The reaction was concentrated, taken into DCM and washed with saturated Na2CO3 and 2M HCl before being dried and re-concentrated.
The residue was taken into anisole (10 ml) and treated with aluminium trichloride (3 g, 22.4 mmol) for 24 hrs before being quenched into saturated NaHCO3. The resulting slurry was filtered through Celite® and the organics separated and dried. Concentration followed by preparative HPLC gave the title compound
NMR δ 11.25 (1H, s), 9.61 (1H, d, J 7.6), 7.91 (1H, d, J 2.8), 7.59-7.72 (3H, m), 7.49-7.53 (2H, m), 7.16-7.34 (4H, m), 5.58 (1H, d, J 7.6), 4.35 (2H, m), 3.80 (2H, m), 3.22 (3H, s);
MS (m/e) 532 [M+H]+, Rt 3.03 min (QC Method 3)
A solution of 8a (250 mg, 0.56 mmol), 21c (240 mg, 1.11 mmol), HBTU (410 mg, 1.11 mmol) and TEA (200 μl, 1.42 mmol) in DMF (3 ml) was stirred for 18 hrs. The reaction was concentrated, taken into DCM and washed with saturated Na2CO3 and 2M HCl before being dried and re-concentrated.
The residue was taken into anisole (10 ml) and treated with aluminium trichloride (3 g, 22.4 mmol) for 24 hrs before being quenched into saturated NaHCO3. The resulting slurry was filtered through Celite® and the organics separated and dried. Concentration followed by preparative HPLC gave the title compound
NMR δ 11.24 (1H, s), 9.67 (1H, d, J 7.6), 7.65-7.72 (2H, m), 7.59-7.65 (1H, m), 7.49-7.53 (2H, m), 7.39-7.49 (1H, m), 7.15-7.35 (4H, m), 5.59 (1H, d, J 7.3), 4.34 (2H, m), 3.81 (2H, m), 3.22 (3H, s);
MS (m/e) 516 [M+H]+, Rt 2.78 min (QC Method 3)
Prepared according to General Method G, using 17a and 21a. Purification by column chromatography (C18, MeCN:H2O 0:1→4:1 over 30 min)
>20:1 mixture of diastereoisomers
NMR δ 11.21 (1H, s), 9.66 (1H, d, J 7.2), 7.91 (1H, d, J 2.8), 7.65-7.54 (4H, m), 7.34-7.14 (4H, m), 5.50 (1H, d, J 7.2), 4.36 (2H, t, J 4.4), 4.14 (1H, d, J 13.0), 3.93-3.76 (2H, m), 3.55-3.37 (4H, m), 3.26 (3H, s), 3.22 (1H, d, J 13.0), 2.53-2.36 (4H, m);
MS (m/e) 631 [M+H]+, Rt 2.38 min (QC Method 4)
Prepared according to General Method G, using 17a and 21c. Purification by column chromatography (C18, MeCN:H2O 0:1→4:1 over 30 min)
>20:1 mixture of diastereoisomers
NMR δ 11.20 (1H, br s), 9.72 (1H, d, J 7.1), 7.73-7.54 (4H, m), 7.49-7.38 (1H, m), 7.36-7.14 (4H, m), 5.50 (1H, d, J 7.1), 4.35 (2H, t, J 4.5), 4.13 (1H, d, J 13.0), 3.93-3.75 (2H, m), 3.55-3.32 (4H, m), 3.26 (3H, s), 3.23 (1H, d, J 13.0), 2.53-2.35 (4H, m);
MS (m/e) 615 [M+H]+, Rt 2.22 min (QC Method 4)
Prepared according to General Method G, using 17a and 32c. Purification by column chromatography (C18, MeCN:H2O 0:1→4:1 over 30 min)
NMR δ 11.22 (1H, s), 9.64 (1H, d, J 7.0), 8.44 (1H, d, J 2.8), 8.25 (1H, d, J 2.8), 7.63-7.50 (3H, m), 7.30-7.13 (3H, m), 5.46 (1H, d, J 7.0), 4.61-4.53 (2H, m), 4.12 (1H, d, J 13.0), 3.85-3.78 (2H, m), 3.53-3.32 (4H, m), 3.26 (3H, s), 3.19 (1H, d, J 13.0), 2.51-2.33 (4H, m);
MS (m/e) 632 [M+H]+, Rt 3.56 min (QC Method 5)
Prepared according to General Method G, using 17a and 32a. Purification by column chromatography (C18, MeCN:H2O 0:1→4:1 over 30 min)
NMR δ 11.28 (0.3H, s), 11.22 (0.7H, s), 9.69 (0.7H, d, J 7.1), 9.61 (0.3H, d, J 7.1), 8.39 (1H, d, J 3.2), 8.19-8.09 (1H, m), 7.75 (0.3H, d, J 1.9), 7.64-7.51 (2.3H, m), 7.42 (0.3H, d, J 1.9), 7.33-7.09 (3.1H, m), 5.53 (0.3H, d, J 7.1), 5.46 (0.7H, d, J 7.1), 4.60-4.51 (2H, m), 4.11 (0.6H, d, J 13.0), 3.85-3.75 (2H, m), 3.52-3.13 (4.7H, m), 3.26 (2H, s), 3.22 (1H, s), 3.00-2.83 (0.7H, m), 2.55-2.33 (2.8H, m), 2.01-1.76 (1.2H, m); MS (m/e) 616 [M+H]+, Rt 4.48, 4.54 min (QC Method 5)
Prepared according to General Method G, using 17b and 21c. Purification by column chromatography (C18, MeCN:H2O 0:1→4:1 over 30 min)
NMR δ 11.11 (0.6H, s), 11.10 (0.4H, s), 9.59 (1H, d, J 7.6), 7.69-7.52 (2H, m), 3.91 (1.8H, s), (7H, m), 5.49 (0.6H, d, J 7.6), 5.47 (0.4H, d, J 7.6), 4.35-4.26 (2H, m), 3.91 (1.8H, s), 3.83-3.71 (2H, m), 3.52 (1.2H, s), 3.21 (1.8H, s), 3.18 (1.2H, s);
MS (m/e) 546 [M+H]+, Rt 2.97 min (QC Method 3)
Prepared according to General Method G, using 17b and 32a. Purification by column chromatography (C18, MeCN:H2O 0:1→4:1 over 30 min)
NMR δ 11.16 (1H, br s), 9.58 (0.4H, d, J 7.2), 9.57 (0.6H, d, J 7.2), 8.39 (1H, d, J 3.2), 8.17-8.10 (1H, m), 7.62-7.53 (1H, m), 7.37-7.14 (5H, m), 5.47 (0.6H, d, J 7.2), 5.46 (0.4H, d, J 7.2), 4.61-4.50 (2H, m), 3.90 (1.8H, s), 3.83-3.74 (2H, m), 3.52 (1.2H, s), 3.25 (1.2H, s), 3.22 (1.8H, s);
MS (m/e) 547 [M+H]+, Rt 2.97 min (QC Method 3)
Prepared according to General Method G, using 17b and 32e. Purification by column chromatography (C18, MeCN:H2O 0:1→4:1 over 30 min)
NMR δ 11.16 (0.6H, br s), 11.15 (0.4H, br s), 9.53 (0.4H, d, J 7.5), 9.50 (0.6H, d, J 7.5), 8.40 (1H, d, J 3.2), 8.18-8.10 (1H, m), 7.62-7.53 (1H, m), 7.35 (1H, dd, J 11.5, 8.2), 7.30-7.12 (4H, m), 5.49 (0.6H, d, J 7.5), 5.48 (0.4H, d, J 7.5), 4.62-4.46 (2H, m), 3.90 (1.8H, s), 3.85-3.74 (2H, m), 3.52 (1.2H, s), 3.42 (1.2H, q, J 7.0), 3.41 (0.8H, q, J 7.0), 0/94 (1.2H, t, J 7.0), 0.93 (1.8H, t, J 7.0);
MS (m/e) 561 [M+H]+, Rt 3.12 min (QC Method 3)
Prepared according to General Method G, using 17c and 21c. Purification by column chromatography (C18, MeCN:H2O 0:1→4:1 over 30 min)
NMR δ 11.15 (0.6H, s), 11.12 (0.4H, s), 9.61 (0.4H, d, J 7.5), 9.60 (0.6H, d, J 7.5), 7.70-7.61 (1H, m), 7.61-7.52 (1H, m), 7.46-7.35 (1H, m), 7.35-7.08 (6H, m), 5.50 (0.4H, d, J 7.5), 5.49 (0.6H, d, J 7.5), 4.37-4.04 (3H, m), 3.92-3.58 (3H, m), 3.21 (3H, s), 1.27 (1.2H, t, J 7.0), 0.82 (1.8H, t, J 7.0);
MS (m/e) 560 [M+H]+, Rt 3.14 min (QC Method 3)
Prepared according to General Method G, using 17c and 32a. Purification by column chromatography (C18, MeCN:H2O 0:1→4:1 over 30 min)
NMR δ 11.20 (0.6H, s), 11.17 (0.4H, s), 9.60 (0.4H, d, J 7.3), 9.59 (0.6H, d, J 7.3), 8.39 (1H, d, J 3.2), 8.18-8.09 (1H, m), 7.61-7.52 (1H, m), 7.35-7.09 (5H, m), 5.48 (0.4H, d, J 7.3), 5.47 (0.6H, d, J 7.3), 4.61-4.51 (2H, m), 4.28-4.05 (0.6H, m), 3.92-3.57 (3.4H, m), 3.25 (1.8H, s), 3.24 (1.2H, s), 1.28 (1.2H, t, J 7.0), 0.82 (1.8H, t, J 7.0);
MS (m/e) 561 [M+H]+, Rt 3.16 min (QC Method 3)
Prepared according to General Method G, using 17c and 32e. Purification by column chromatography (C18, MeCN:H2O 0:1→4:1 over 30 min)
NMR δ 11.18 (0.6H, s), 11.16 (0.4H, s), 9.54 (1H, d, J 7.5), 8.40 (1H, d, J 3.2), 8.14 (1H, ddd, J 8.5, 5.1, 3.2), 7.61-7.52 (1H, m), 7.34-7.09 (5H, m), 5.49 (1H, d, J 7.5), 4.63-4.46 (2H, m), 4.28-4.06 (0.7H, m), 3.92-3.59 (3.3H, m), 3.43 (2H, q, J 7.0), 1.26 (1.2H, t, J 7.0), 0.96 (1.2H, t, J 7.0), 0.94 (1.8H, t, J 7.0), 0.84 (1.8H, t, J 7.0);
MS (m/e) 575 [M+H]+, Rt 3.30 min (QC Method 3)
Prepared from Example 14, using preparative HPLC:
Column: 250×50 mm CHIRALPAK® IC 5 μm
Mobile phase: Dichloromethane
Flow rate: 180 ml/min
Detection: 325 nm
Temperature: 21° C.
NMR δ 11.26 (1H, s), 9.61 (1H, d, J 7.3), 7.93 (1H, d, J 1.9), 7.90 (1H, d, J 2.8), 7.75 (1H, d, J 1.9), 7.58-7.69 (2H, m), 7.18-7.36 (4H, m), 5.58 (1H, d, J 7.3), 4.36 (2H, m), 3.81 (2H, m), 3.23 (3H, s);
MS (m/e) 568 [M+H]+, Rt 3.30 min (QC Method 3)
Prepared from Example 14, using preparative HPLC:
Column: 250×50 mm CHIRALPAK® IC 5 μm
Mobile phase: Dichloromethane
Flow rate: 180 ml/min
Detection: 325 nm
Temperature: 21° C.
NMR δ 11.26 (1H, s), 9.61 (1H, d, J 7.3), 7.93 (1H, d, J 1.9), 7.90 (1H, d, J 2.8), 7.75 (1H, d, J 1.9), 7.58-7.69 (2H, m), 7.18-7.36 (4H, m), 5.58 (1H, d, J 7.3), 4.36 (2H, m), 3.81 (2H, m), 3.23 (3H, s);
MS (m/e) 568 [M+H]+, Rt 3.30 min (QC Method 3)
Prepared from Example 16, using preparative HPLC:
Column: 250×50 mm CHIRALPAK® IA 5 μm
Mobile phase: 40/60/1 n-Heptane/Dichloromethane/Ethanol
Flow rate: 120 ml/min
Detection: UV 250 nm
Temperature: 25° C.
NMR δ 11.24 (1H, br, s), 9.66 (1H, d, J 7.3), 7.91 (1H, d, J 1.9), 7.74 (1H, d, J 1.9), 7.59-7.70 (2H, m), 7.42 (1H, m), 7.16-7.34 (4H, m), 5.56 (1H, d, J 7.6), 4.32 (2H, m), 3.79 (2H, m), 3.23 (3H, s);
MS (m/e) 550 [M+H]+, Rt 1.07 min (QC Method 2)
Prepared from Example 16, using preparative HPLC:
Column: 250×50 mm CHIRALPAK® IA 5 μm
Mobile phase: 40/60/1 n-Heptane/Dichloromethane/Ethanol
Flow rate: 120 ml/min
Detection: UV 250 nm
Temperature: 25° C.
NMR δ 11.24 (1H, br, s), 9.66 (1H, d, J 7.3), 7.91 (1H, d, J 1.9), 7.74 (1H, d, J 1.9), 7.59-7.70 (2H, m), 7.42 (1H, m), 7.16-7.34 (4H, m), 5.56 (1H, d, J 7.6), 4.32 (2H, m), 3.79 (2H, m), 3.23 (3H, s);
MS (m/e) 550 [M+H]+, Rt 1.07 min (QC Method 2)
Prepared from Example 30, using preparative HPLC:
Column: CHIRALCEL® OZ 20 μm-250×76 mm
Mobile phase: Acetonitrile
Flow rate: 270 ml/min
Detection: UV 260 nm
Temperature: 40° C.
NMR δ 11.28 (1H, br), 9.65 (1H, d, J 7.3), 8.42 (1H, d, J 3.2), 8.17 (1H, dd, J 8.5, 3.2), 7.91 (1H, d, J 1.9), 7.74 (1H, d, J 1.9), 7.65 (1H, m), 7.19-7.35 (3H, m), 5.57 (1H, d, J 7.0), 4.59 (2H, m), 3.83 (2H, m), 3.27 (3H, s);
MS (m/e) 553 [M+H]+, Rt 3.15 min (QC Method 3)
Prepared from Example 30, using preparative HPLC:
Column: CHIRALCEL® OZ 20 μm-250×76 mm
Mobile phase: Acetonitrile
Flow rate: 270 ml/min
Detection: UV 260 nm
Temperature: 40° C.
NMR δ 11.28 (1H, br), 9.65 (1H, d, J 7.3), 8.42 (1H, d, J 3.2), 8.17 (1H, dd, J 8.5, 3.2), 7.91 (1H, d, J 1.9), 7.74 (1H, d, J 1.9), 7.65 (1H, m), 7.19-7.35 (3H, m), 5.57 (1H, d, J 7.0), 4.59 (2H, m), 3.83 (2H, m), 3.27 (3H, s);
MS (m/e) 553 [M+H]+, Rt 3.15 min (QC Method 3)
Prepared from Example 34, using preparative HPLC:
Column: 250×50 mm CHIRALPAK® IC 5 μM
Mobile phase: n-Heptane/Dichloromethane/Ethanol 50/50/1
Flow rate: 120 ml/min
Detection: UV 250 nm
Temperature: 25° C.
NMR δ 11.35 (1H, br), 9.66 (1H, d, J 7.3), 8.48 (1H, d, J 3.2), 8.23 (1H, dd, J 8.5, 3.2), 7.98 (1H, d, J 1.9), 7.82 (1H, d, J 1.9), 7.70 (1H, m), 7.38 (1H, d, J 7.9), 7.23-7.33 (2H, m), 5.63 (1H, d, J 7.3), 4.62 (2H, m), 3.88 (2H, m), 3.49 (2H, q, J 7.0), 1.01 (3H, t, J 7.0);
MS (m/e) 565 [M+H]+, Rt 3.46 min (QC Method 4)
Prepared from Example 34, using preparative HPLC:
Column: 250×50 mm CHIRALPAK® IC 5 μM
Mobile phase: n-Heptane/Dichloromethane/Ethanol 50/50/1
Flow rate: 120 ml/min
Detection: UV 250 nm
Temperature: 25° C.
NMR δ 11.35 (1H, br), 9.66 (1H, d, J 7.3), 8.48 (1H, d, J 3.2), 8.23 (1H, dd, J 8.5, 3.2), 7.98 (1H, d, J 1.9), 7.82 (1H, d, J 1.9), 7.70 (1H, m), 7.38 (1H, d, J 7.9), 7.23-7.33 (2H, m), 5.63 (1H, d, J 7.3), 4.62 (2H, m), 3.88 (2H, m), 3.49 (2H, q, J 7.0), 1.01 (3H, t, J 7.0);
MS (m/e) 565 [M+H]+, Rt 3.46 min (QC Method 4)
Prepared from Example 41, using preparative HPLC:
Column: 250×10 mm CHIRALPAK® IA 5 μm
Mobile phase: 80% Ethanol in i-hexane
Flow rate: 1.0 ml/min
Detection: UV 254 nm
Temperature: 20° C.
NMR δ 11.19 (1H, br), 9.98 (1H, d, J 8.2), 8.24 (1H, d, J 3.2), 7.93 (1H, d, J 1.9), 7.75 (1H, d, J 1.9), 7.58-7.67 (2H, m), 7.32 (1H, d, J 7.9), 7.14-7.24 (2H, m), 5.52 (1H, d, J 7.9), 3.44-3.54 (4H, m), 3.14 (3H, s), 2.90 (3H, s);
MS (m/e) 564 [M+H]+, Rt 3.30 min (QC Method 4)
Prepared from Example 41, using preparative HPLC:
Column: 250×10 mm CHIRALPAK® IA 5 μm
Mobile phase: 80% Ethanol in i-hexane
Flow rate: 1.0 ml/min
Detection: UV 254 nm
Temperature: 20° C.
NMR δ 11.19 (1H, br), 9.98 (1H, d, J 8.2), 8.24 (1H, d, J 3.2), 7.93 (1H, d, J 1.9), 7.75 (1H, d, J 1.9), 7.58-7.67 (2H, m), 7.32 (1H, d, J 7.9), 7.14-7.24 (2H, m), 5.52 (1H, d, J 7.9), 3.44-3.54 (4H, m), 3.14 (3H, s), 2.90 (3H, s);
MS (m/e) 564 [M+H]+, Rt 3.30 min (QC Method 4)
Prepared from Example 56, using preparative HPLC:
Column: 250×10 mm CHIRALPAK® IA 5 μm
Mobile phase: 5% Ethanol in 60% Dichloromethane/i-hexane
Flow rate: 2.0 ml/min
Detection: UV 254 nm
Temperature: 20° C.
NMR δ 11.15 (0.6H, s), 11.12 (0.4H, s), 9.61 (0.4H, d, J 7.5), 9.60 (0.6H, d, J 7.5), 7.70-7.61 (1H, m), 7.61-7.52 (1H, m), 7.46-7.35 (1H, m), 7.35-7.08 (6H, m), 5.50 (0.4H, d, J 7.5), 5.49 (0.6H, d, J 7.5), 4.37-4.04 (3H, m), 3.92-3.58 (3H, m), 3.21 (3H, s), 1.27 (1.2H, t, J 7.0), 0.82 (1.8H, t, J 7.0);
MS (m/e) 560 [M+H]+, Rt 3.31 min (QC Method 4)
Prepared from Example 56, using preparative HPLC:
Column: 250×10 mm CHIRALPAK® IA 5 μm
Mobile phase: 5% Ethanol in 60% Dichloromethane/i-hexane
Flow rate: 2.0 ml/min
Detection: UV 254 nm
Temperature: 20° C.
NMR δ 11.15 (0.6H, s), 11.12 (0.4H, s), 9.61 (0.4H, d, J 7.5), 9.60 (0.6H, d, J 7.5), 7.70-7.61 (1H, m), 7.61-7.52 (1H, m), 7.46-7.35 (1H, m), 7.35-7.08 (6H, m), 5.50 (0.4H, d, J 7.5), 5.49 (0.6H, d, J 7.5), 4.37-4.04 (3H, m), 3.92-3.58 (3H, m), 3.21 (3H, s), 1.27 (1.2H, t, J 7.0), 0.82 (1.8H, t, J 7.0);
MS (m/e) 560 [M+H]+, Rt 3.31 min (QC Method 4)
This application claims the benefit under 35 U.S.C. §119(e) of Application No. 61/239476 filed 3 Sep. 2009.
| Number | Date | Country | |
|---|---|---|---|
| 61239476 | Sep 2009 | US |
