COMBINATION THERAPY OF A PD-1 ANTAGONIST AND LAG3 ANTAGONIST AND LENVATINIB OR A PHARMACEUTICALLY ACCEPTABLE SALT THEREOF FOR TREATING PATIENTS WITH CANCER

Information

  • Patent Application
  • 20240010729
  • Publication Number
    20240010729
  • Date Filed
    September 14, 2021
    2 years ago
  • Date Published
    January 11, 2024
    3 months ago
Abstract
The present disclosure describes combination therapies comprising an antagonist of Programmed Death 1 receptor (PD-1), a Lymphocyte-Activation Gene 3 (LAG3) antagonist, and lenvatinib or a pharmaceutically acceptable salt thereof and the use of the combination therapies for the treatment cancer.
Description
FIELD OF THE INVENTION

The present invention relates to combination therapies useful for the treatment of cancer. In particular, the invention relates to a combination therapy that comprises an antagonist of a Programmed Death 1 protein (PD-1), an antagonist of Lymphocyte-Activation Gene 3 (LAG3), and lenvatinib or a pharmaceutically acceptable salt thereof.


REFERENCE TO SEQUENCE LISTING SUBMITTED ELECTRONICALLY

This application contains a Sequence Listing which has been submitted electronically in ASCII format and is hereby incorporated by reference in its entirety. Said ASCII copy, created on Sep. 13, 2021, is named 25101WO-PCT_SL.txt and is 38 kilobytes in size.


BACKGROUND OF THE INVENTION

PD-1 is recognized as an important molecule in immune regulation and the maintenance of peripheral tolerance. PD-1 is moderately expressed on naive T, B and NKT cells and up-regulated by T/B cell receptor signaling on lymphocytes, monocytes and myeloid cells (1).


Two known ligands for PD-1, PD-L1 (B7-H1) and PD-L2 (B7-DC), are expressed in human cancers arising in various tissues. In large sample sets of e.g. ovarian, renal, colorectal, pancreatic, liver cancers and melanoma, it was shown that PD-L1 expression correlated with poor prognosis and reduced overall survival irrespective of subsequent treatment (2-13). Similarly, PD-1 expression on tumor infiltrating lymphocytes was found to mark dysfunctional T cells in breast cancer and melanoma (14-15) and to correlate with poor prognosis in renal cancer (16). Thus, it has been proposed that PD-L1 expressing tumor cells interact with PD-1 expressing T cells to attenuate T cell activation and evasion of immune surveillance, thereby contributing to an impaired immune response against the tumor.


Several monoclonal antibodies that inhibit the interaction between PD-1 and one or both of its ligands PD-L1 and PD-L2 have been approved for treating cancer. Pembrolizumab is a potent humanized immunoglobulin G4 (IgG4) mAb with high specificity of binding to the programmed cell death 1 (PD 1) receptor, thus inhibiting its interaction with programmed cell death ligand 1 (PD-L1) and programmed cell death ligand 2 (PD-L2). Based on preclinical in vitro data, pembrolizumab has high affinity and potent receptor blocking activity for PD-1. Keytruda® (pembrolizumab) is indicated for the treatment of patients across a number of indications.


Lymphocyte-Activation Gene 3 (LAG3) is an inhibitory immune modulatory receptor that regulates effector T cell homeostasis, proliferation, and activation, and has a role in the suppressor activity of regulatory T cells (Tregs). LAG3 is expressed on activated CD8+ and CD4+ T cells, Tregs and the Tr1 regulatory T-cell population, as well as on natural killer cells and a subset of tolerogenic plasmacytoid dendritic cells. Because of its proposed role on both effector T cells and Tregs, LAG3 is one of several immune checkpoint molecules where simultaneous blockade of both cell populations has the potential to enhance antitumor immunity.


LAG3 is structurally related to cluster of differentiation (CD) 4 and a member of the immunoglobulin (Ig) superfamily. Like CD4, its ligand is major histocompatibility complex (MHC) Class II molecules. Interaction with its ligand leads to dimerization and signal transduction resulting in altered T-cell activation. Following T-cell activation, LAG3 is transiently expressed on the cell surface. A large proportion of LAG3 molecules are found in intracellular stores and can be rapidly translocated to the cell membrane upon T-cell activation. LAG3 expression is regulated at the cell surface by extracellular cleavage to yield a soluble form of LAG3 (sLAG 3), which can be detected in serum. Expression of LAG3 is tightly regulated and represents a self-limiting mechanism to counter uncontrolled T-cell activity.


Tyrosine kinases are involved in the modulation of growth factor signaling and thus are an important target for cancer therapies. Lenvatinib is a multiple RTK (multi-RTK) inhibitor that selectively inhibits the kinase activities of vascular endothelial growth factor (VEGF) receptors (VEGFR1 (FLT1), VEGFR2 (KDR) and VEGFR3 (FLT4)), and fibroblast growth factor (FGF) receptors FGFR1, 2, 3 and 4 in addition to other proangiogenic and oncogenic pathway-related RTKs (including the platelet-derived growth factor (PDGF) receptor PDGFRα; KIT; and the RET proto-oncogene (RET)) involved in tumor proliferation. In particular, lenvatinib possesses a new binding mode (Type V) to VEGFR2, as confirmed through X-ray crystal structural analysis, and exhibits rapid and potent inhibition of kinase activity, according to kinetic analysis.


In the United States (US), CRC is the third most common diagnosed cancer and the third leading cause of cancer death in both men and women. The American Cancer Society estimated that 132,640 people will be diagnosed with CRC and 49,700 people will die from the disease in 2015. Despite recent advances, the intent of treatment for most of mCRC participants is palliative with few patients achieving long-term survival (5-year survival rate of 13.5%). Current standard of care (SOC) treatments for mCRC in the early-line setting include chemotherapy based on fluoropyrimidine, oxaliplatin, and irinotecan used in combination or sequentially, with option for monoclonal antibodies targeting vascular endothelial growth factor (VEGF) (e.g., bevacizumab, ziv-aflibercept) or its receptors (eg, ramucirumab), and in patients with Ras wild type tumors, monoclonal antibodies targeting the epidermal growth factor (EGF) receptor (e.g., cetuximab, panitumumab). However, treatment options for heavily pre-treated patients beyond the second-line setting are especially limited and associated toxicities can be severe.


Lynch syndrome is a genetic disorder defined by defective mismatch repair that increases susceptibility to various cancer types, including CRC. Diagnosis can be confirmed with one of two biologically distinct but diagnostically equivalent tests, a) IHC characterization of Mismatch Repair (MMR) protein expression and b) PCR of genetic microsatellite markers in tumor tissue. The results of MMR IHC and PCR-based MSI testing have been shown to be largely concordant (97.80% concordance, exact 95% CI: 96.27-98.82). Bartley et. al. Cancer Prev Res (Phila) 2012; 5:320-327. Anti-cancer activity in the colorectal cancer (CRC) population with anti-PD-1 therapies including pembrolizumab has been limited to cancers with the deficient Mismatch Repair (dMMR)/Microsatellite Instability High (MSI-H) phenotype, which represents a minority (˜5%) of the Stage IV metastatic colorectal cancer (mCRC) population. Anti-PD-1 therapy has demonstrated little to no benefit in mCRC tumors that are non-MSI-H or have proficient Mismatch Repair (pMMR). MSI-H colorectal tumors are found predominantly in the proximal colon, and are associated with a less aggressive clinical course than are stage-matched Microsatellite Instability Low (MSI-L) or Microsatellite Stable (MSS) tumors. Since approximately 95% of mCRC patients have tumors that are non-MSI-H or pMMR, there is a need to develop combination regimens that would provide durable clinical benefit. While high response rates are reported in previously untreated mCRC population with current standard chemotherapeutic therapies, durability of clinical benefit is limited. Furthermore, treatment options for heavily pre-treated patients beyond the second-line setting are limited, and associated toxicities can be severe. Regorafenib and TAS-102 are accepted third line standard of care (SOC) therapies for patients with mCRC that is non MSI-H/pMMR. These therapies are approved for mCRC patients who have been treated with fluoropyrinidine-, irinotecan-, oxaliplatin-containing chemotherapies, anti-VEGF or an anti-EGFR agent (if KRAS wild-type). Despite regulatory approval, regorafenib and TAS-102 offer minimal benefits as ORR is ≤2% for both agents. Minimal durability of clinical benefit is evidenced by a 6-month PFS rate of ˜15%. Clearly, there is a high unmet medical need in developing novel combination regimens to improve the clinical outcome for patients with non-MSI-H/pMMR CRC.


There have been recent advances in the treatment of first line (1L) advanced Renal Cell Carcinoma (RCC) combining immunomodulators and/or VEGF receptor tyrosine kinase inhibitors (VEGFR-TKI(s)), and multiple agents also now available for the treatment of patients with second line (2L) RCC. However existing data shows that few patients experience Complete Response (CR) with these agents and nearly all progress. Although these significant advances have led to a change in the treatment paradigm of these patients, there remains an unmet need to improve outcomes for both 1L and 2L+ advanced RCC populations using novel combination regimens.


SUMMARY OF THE INVENTION

The invention provides a method for treating cancer in a individual comprising administering to the individual a combination therapy that comprises a PD-1 antagonist, a LAG3 antagonist, and 4-[3-chloro-4-(cyclopropylaminocarbonyl)aminophenoxy]-7-methoxy-6-quinolinecarboxamide represented by Formula (I) (lenvatinib).




embedded image


or a pharmaceutically acceptable salt thereof. In one embodiment, the cancer is non-microsatellite instability-high (non-MSI-H) or proficient mismatch repair (pMMR) colorectal cancer (CRC). In one embodiment, the cancer is renal cell carcinoma. In one embodiment, the PD-1 antagonist and LAG3 antagonist are co-formulated. In another embodiment, the PD-1 antagonist and LAG3 antagonist are co-administered. In one embodiment, the PD-1 antagonist is an anti-PD-1 antibody that blocks the binding of PD-1 to PD-L1 and PD-L2. In another embodiment, the LAG3 antagonist is an anti-LAG3 antibody that blocks the binding of LAG3 to MHC Class II molecules. In one embodiment, lenvatinib mesylate is used.


The triple combination therapy of the invention with lenvatinib, an anti-PD-1 antibody, an anti-LAG3 antibody demonstrated a trend towards better tumor growth inhibition than Lenvatinib and anti-PD-1 combination therapy. In addition, it is suggested that lenvatinib can provide benefit to tumors which do not respond to anti-PD-1 and anti-LAG3 combination therapy.





BRIEF DESCRIPTION OF THE DRAWINGS


FIG. 1A-B. The anti-tumor effect of concurrent administration of Lenvatinib with anti-PD-1 and anti-LAG3 in the CT26 model as shown by average tumor volumes in each treatment group (A) or the Kaplan-Meier survival curves for each respective group (B).



FIG. 2. The anti-tumor effect of concurrent administration of Lenvatinib with anti-PD-1 and anti-LAG3 in the KPC-2838 model as shown by average tumor volumes in each treatment group.



FIG. 3A-B. The change in mouse body weights during course of specified treatments for CT26 (A) and KPC-2838c3 (B).





DETAILED DESCRIPTION

Abbreviations. Throughout the detailed description and examples of the invention the following abbreviations will be used:

    • BOR Best overall response
    • BID One dose twice daily
    • BICR Blinded Independent Central Radiology
    • CBR Clinical Benefit Rate
    • CDR Complementarity determining region
    • CHO Chinese hamster ovary
    • CR Complete Response
    • DCR Disease Control Rate
    • DFS Disease free survival
    • DLT Dose limiting toxicity
    • DOR Duration of Response
    • DSDR Durable Stable Disease Rate
    • FFPE Formalin-fixed, paraffin-embedded
    • FR Framework region
    • IgG Immunoglobulin G
    • IHC Immunohistochemistry or immunohistochemical
    • irRC Immune related response criteria
    • IV Intravenous
    • MTD Maximum tolerated dose
    • NCBI National Center for Biotechnology Information
    • NCI National Cancer Institute
    • ORR Objective response rate
    • OS Overall survival
    • PD Progressive disease
    • PD-1 Programmed Death 1
    • PD-L1 Programmed Cell Death 1 Ligand 1
    • PD-L2 Programmed Cell Death 1 Ligand 2
    • PFS Progression free survival
    • PR Partial response
    • Q2W One dose every two weeks
    • Q3W One dose every three weeks
    • QD One dose per day
    • RECIST Response Evaluation Criteria in Solid Tumors
    • SD Stable disease
    • TPI Toxicity Probability Interval
    • VH Immunoglobulin heavy chain variable region
    • VK Immunoglobulin kappa light chain variable region


I. Definitions

So that the invention may be more readily understood, certain technical and scientific terms are specifically defined below. Unless specifically defined elsewhere in this document, all other technical and scientific terms used herein have the meaning commonly understood by one of ordinary skill in the art to which this invention belongs.


As used herein, including the appended claims, the singular forms of words such as “a,” “an,” and “the,” include their corresponding plural references unless the context clearly dictates otherwise.


As used herein, an “Ab6 antibody” means a monoclonal antibody that consists of two heavy chain and two light chain sequences of SEQ ID NO: 23 and SEQ ID NO: 22, respectively.


As used herein, an “Ab6 variant” means a monoclonal antibody that comprises heavy chain and light chain sequences that are substantially identical to those in Ab6 described herein (as described below and in International patent publn. no. WO2016028672, incorporated by reference in its entirety), except for having three, two or one conservative amino acid substitutions at positions that are located outside of the light chain CDRs and six, five, four, three, two or one conservative amino acid substitutions that are located outside of the heavy chain CDRs, e.g., the variant positions are located in the FR regions or the constant region, and optionally has a deletion of the C-terminal lysine residue of the heavy chain. In other words, Ab6 and a Ab6 variant comprise identical CDR sequences, but differ from each other due to having a conservative amino acid substitution at no more than three or six other positions in their full length light and heavy chain sequences, respectively. An Ab6 variant is substantially the same as Ab6 with respect to the following properties: binding affinity to human LAG3 and ability to block the binding of human LAG3 to human MHC Class II.


“Administration” as it applies to an animal, human, experimental subject, cell, tissue, organ, or biological fluid, refers to contact of an exogenous pharmaceutical, therapeutic, diagnostic agent, or composition to the animal, human, subject, cell, tissue, organ, or biological fluid. Treatment of a cell encompasses contact of a reagent to the cell, as well as contact of a reagent to a fluid, where the fluid is in contact with the cell. The term “subject” includes any organism, preferably an animal, more preferably a mammal (e.g., rat, mouse, dog, cat, rabbit) and most preferably a human.


As used herein, the term “antibody” refers to any form of antibody that exhibits the desired biological or binding activity. Thus, it is used in the broadest sense and specifically covers, but is not limited to, monoclonal antibodies (including full length monoclonal antibodies), polyclonal antibodies, multispecific antibodies (e.g., bispecific antibodies), humanized, fully human antibodies, chimeric antibodies and camelized single domain antibodies. “Parental antibodies” are antibodies obtained by exposure of an immune system to an antigen prior to modification of the antibodies for an intended use, such as humanization of an antibody for use as a human therapeutic.


In general, the basic antibody structural unit comprises a tetramer. Each tetramer includes two identical pairs of polypeptide chains, each pair having one “light” (about 25 kDa) and one “heavy” chain (about 50-70 kDa). The amino-terminal portion of each chain includes a variable region of about 100 to 110 or more amino acids primarily responsible for antigen recognition. The carboxy-terminal portion of the heavy chain may define a constant region primarily responsible for effector function. Typically, human light chains are classified as kappa and lambda light chains. Furthermore, human heavy chains are typically classified as mu, delta, gamma, alpha, or epsilon, and define the antibody's isotype as IgM, IgD, IgG, IgA, and IgE, respectively. Within light and heavy chains, the variable and constant regions are joined by a “J” region of about 12 or more amino acids, with the heavy chain also including a “D” region of about 10 more amino acids. See generally, Fundamental Immunology Ch. 7 (Paul, W., ed., 2nd ed. Raven Press, N.Y. (1989).


The variable regions of each light/heavy chain pair form the antibody binding site. Thus, in general, an intact antibody has two binding sites. Except in bifunctional or bispecific antibodies, the two binding sites are, in general, the same.


Typically, the variable domains of both the heavy and light chains comprise three hypervariable regions, also called complementarity determining regions (CDRs), which are located within relatively conserved framework regions (FR). The CDRs are usually aligned by the framework regions, enabling binding to a specific epitope. In general, from N-terminal to C-terminal, both light and heavy chains variable domains comprise FR1, CDR1, FR2, CDR2, FR3, CDR3 and FR4. The assignment of amino acids to each domain is, generally, in accordance with the definitions of Sequences of Proteins of Immunological Interest, Kabat, et al.; National Institutes of Health, Bethesda, Md.; 5th ed.; NIH Publ. No. 91-3242 (1991); Kabat (1978) Adv. Prot. Chem. 32:1-75; Kabat, et al., (1977) J. Biol. Chem. 252:6609-6616; Chothia, et al., (1987) J Mol. Biol. 196:901-917 or Chothia, et al., (1989) Nature 342:878-883.


As used herein, unless otherwise indicated, “antibody fragment” or “antigen binding fragment” refers to antigen binding fragments of antibodies, i.e. antibody fragments that retain the ability to bind specifically to the antigen bound by the full-length antibody, e.g. fragments that retain one or more CDR regions. Examples of antibody binding fragments include, but are not limited to, Fab, Fab′, F(ab′)2, and Fv fragments; diabodies; linear antibodies; single-chain antibody molecules, e.g., sc-Fv; nanobodies and multispecific antibodies formed from antibody fragments.


An antibody that “specifically binds to” a specified target protein is an antibody that exhibits preferential binding to that target as compared to other proteins, but this specificity does not require absolute binding specificity. An antibody is considered “specific” for its intended target if its binding is determinative of the presence of the target protein in a sample, e.g. without producing undesired results such as false positives. Antibodies, or binding fragments thereof, useful in the present invention will bind to the target protein with an affinity that is at least two fold greater, preferably at least ten times greater, more preferably at least 20-times greater, and most preferably at least 100-times greater than the affinity with non-target proteins. As used herein, an antibody is said to bind specifically to a polypeptide comprising a given amino acid sequence, e.g. the amino acid sequence of a mature human PD-1 or human PD-L1 molecule, if it binds to polypeptides comprising that sequence but does not bind to proteins lacking that sequence.


“Chimeric antibody” refers to an antibody in which a portion of the heavy and/or light chain is identical with or homologous to corresponding sequences in an antibody derived from a particular species (e.g., human) or belonging to a particular antibody class or subclass, while the remainder of the chain(s) is identical with or homologous to corresponding sequences in an antibody derived from another species (e.g., mouse) or belonging to another antibody class or subclass, as well as fragments of such antibodies, so long as they exhibit the desired biological activity.


“Co-administration” as used herein for agents such as the PD-1 antagonist or LAG3 antagonist means that the agents are administered so as to have overlapping therapeutic activities, and not necessarily that the agents are administered simultaneously to the subject. The agents may or may not be in physical combination prior to administration. In an embodiment, the agents are administered to a subject simultaneously or at about the same time. For example, the anti-PD-1 antibody and anti-LAG3 antibody may be contained in separate vials, when in liquid solution, may be mixed into the same intravenous infusion bag or injection device, and administered simultaneously to the patient.


“Co-formulated” or “co-formulation” or “coformulation” or “coformulated” as used herein refers to at least two different antibodies or antigen binding fragments thereof that are formulated together and stored as a combined product in a single vial or vessel (for example an injection device) rather than being formulated and stored individually and then mixed before administration or separately administered. In one embodiment, the co-formulation contains two different antibodies or antigen binding fragments thereof.


“Human antibody” refers to an antibody that comprises human immunoglobulin protein sequences only. A human antibody may contain murine carbohydrate chains if produced in a mouse, in a mouse cell, or in a hybridoma derived from a mouse cell. Similarly, “mouse antibody” or “rat antibody” refer to an antibody that comprises only mouse or rat immunoglobulin sequences, respectively.


“Humanized antibody” refers to forms of antibodies that contain sequences from non-human (e.g., murine) antibodies as well as human antibodies. Such antibodies contain minimal sequence derived from non-human immunoglobulin. In general, the humanized antibody will comprise substantially all of at least one, and typically two, variable domains, in which all or substantially all of the hypervariable loops correspond to those of a non-human immunoglobulin and all or substantially all of the FR regions are those of a human immunoglobulin sequence. The humanized antibody optionally also will comprise at least a portion of an immunoglobulin constant region (Fc), typically that of a human immunoglobulin. The prefix “hum”. “hu” or “h” is added to antibody clone designations when necessary to distinguish humanized antibodies from parental rodent antibodies. The humanized forms of rodent antibodies will generally comprise the same CDR sequences of the parental rodent antibodies, although certain amino acid substitutions may be included to increase affinity, increase stability of the humanized antibody, or for other reasons.


“Anti-tumor response” when referring to a cancer patient treated with a therapeutic regimen, such as a combination therapy described herein, means at least one positive therapeutic effect, such as for example, reduced number of cancer cells, reduced tumor size, reduced rate of cancer cell infiltration into peripheral organs, reduced rate of tumor metastasis or tumor growth, or progression free survival. Positive therapeutic effects in cancer can be measured in a number of ways (See, W. A. Weber, J. Null. Med. 50:1S-10S (2009); Eisenhauer et al., supra). In some embodiments, an anti-tumor response to a combination therapy described herein is assessed using RECIST 1.1 criteria, bidimentional irRC or unidimensional irRC. In some embodiments, an anti-tumor response is any of SD, PR, CR. PFS, or DFS.


“Bidimensional irRC” refers to the set of criteria described in Wolchok J D, et al. Guidelines for the evaluation of immune therapy activity in solid tumors: immune-related response criteria. Clin Cancer Res. 2009:15(23):7412-7420. These criteria utilize bidimensional tumor measurements of target lesions, which are obtained by multiplying the longest diameter and the longest perpendicular diameter (cm2) of each lesion.


“Biotherapeutic agent” means a biological molecule, such as an antibody or fusion protein, that blocks ligand/receptor signaling in any biological pathway that supports tumor maintenance and/or growth or suppresses the anti-tumor immune response. Classes of biotherapeutic agents include, but are not limited to, antibodies to PD-1, LAG3, VEGF, EGFR, Her2/neu, other growth factor receptors, CD20, CD40, CD-40L, CTLA-4, OX-40, 4-1BB, and ICOS.


“CBR” or “Clinical Benefit Rate” means CR+PR+durable SD


“CDR” or “CDRs” as used herein means complementarity determining region(s) in a immunoglobulin variable region, defined using the Kabat numbering system, unless otherwise indicated.


“Chemotherapeutic agent” is a chemical compound useful in the treatment of cancer. Classes of chemotherapeutic agents include, but are not limited to: alkylating agents, antimetabolites, kinase inhibitors, spindle poison plant alkaloids, cytoxic/antitumor antibiotics, topisomerase inhibitors, photosensitizers, anti-estrogens and selective estrogen receptor modulators (SERMs), anti-progesterones, estrogen receptor down-regulators (ERDs), estrogen receptor antagonists, leutinizing hormone-releasing hormone agonists, anti-androgens, aromatase inhibitors, EGFR inhibitors, VEGF inhibitors, and anti-sense oligonucleotides that inhibit expression of genes implicated in abnormal cell proliferation or tumor growth. Chemotherapeutic agents useful in the treatment methods of the present invention include cytostatic and/or cytotoxic agents.


“Chothia” as used herein means an antibody numbering system described in Al-Lazikani el al., JMB 273:927-948 (1997).


“Comprising” or variations such as “comprise”. “comprises” or “comprised of” are used throughout the specification and claims in an inclusive sense, i.e., to specify the presence of the stated features but not to preclude the presence or addition of further features that may materially enhance the operation or utility of any of the embodiments of the invention, unless the context requires otherwise due to express language or necessary implication.


“Combination therapy” or “in combination” refers to two or more biotherapeutic and chemotherapeutic agents administered as a part of a treatment regimen.


“In sequence” refers to two or more treatment regimens administered sequentially in any order.


“Conservatively modified variants” or “conservative substitution” refers to substitutions of amino acids in a protein with other amino acids having similar characteristics (e.g. charge, side-chain size, hydrophobicity/hydrophilicity, backbone conformation and rigidity, etc.), such that the changes can frequently be made without altering the biological activity or other desired property of the protein, such as antigen affinity and/or specificity. Those of skill in this art recognize that, in general, single amino acid substitutions in non-essential regions of a polypeptide do not substantially alter biological activity (see, e.g., Watson et al. (1987) Molecular Biology of the Gene, The Benjamin/Cummings Pub. Co., p. 224 (4th Ed.)). In addition, substitutions of structurally or functionally similar amino acids are less likely to disrupt biological activity. Exemplary conservative substitutions are set forth in Table 1 below.









TABLE 1







Exemplary Conservative Amino Acid Substitutions










Original residue
Conservative substitution







Ala (A)
Gly; Ser



Arg (R)
Lys; His



Asn (N)
Gln; His



Asp (D)
Glu; Asn



Cys (C)
Ser; Ala



Gln (Q)
Asn



Glu (E)
Asp; Gln



Gly (G)
Ala



His (H)
Asn; Gln



Ile (I)
Leu; Val



Leu (L)
Ile; Val



Lys (K)
Arg; His



Met (M)
Leu; Ile; Tyr



Phe (F)
Tyr; Met; Leu



Pro (P)
Ala



Ser (S)
Thr



Thr (T)
Ser



Trp (W)
Tyr; Phe



Tyr (Y)
Trp; Phe



Val (V)
Ile; Leu










“Consists essentially of,” and variations such as “consist essentially of” or “consisting essentially of,” as used throughout the specification and claims, indicate the inclusion of any recited elements or group of elements, and the optional inclusion of other elements, of similar or different nature than the recited elements, that do not materially change the basic or novel properties of the specified dosage regimen, method, or composition. As a non-limiting example, a PD-1 antagonist that consists essentially of a recited amino acid sequence may also include one or more amino acids, including substitutions of one or more amino acid residues, which do not materially affect the properties of the binding compound.


“DCR” or “Disease Control Rate” means CR+PR+SD.


“Diagnostic anti-PD-L monoclonal antibody” means a mAb that specifically binds to the mature form of the designated PD-L (PD-L1 or PDL2) that is expressed on the surface of certain mammalian cells. A mature PD-L lacks the presecretory leader sequence, also referred to as leader peptide The terms “PD-L” and “mature PD-L” are used interchangeably herein, and shall be understood to mean the same molecule unless otherwise indicated or readily apparent from the context.


As used herein, a diagnostic anti-human PD-L1 mAb or an anti-hPD-L1 mAb refers to a monoclonal antibody that specifically binds to mature human PD-L1. A mature human PD-L1 molecule consists of amino acids 19-290 of the following sequence:









(SEQ ID NO: 32)


MRIFAVFIFMTYWHLLNAFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDL





AALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQ





ITDVKLQDAGVYRCMISYGGADYKRITVKVNAPYNKINQRILVVDPVTSE





HELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRIN





TTTNEIFYCTFRRLDPEENHTAELVIPELPLAHPPNERTHLVILGAILLC





LGVALTFIFRLRKGRMMDVKKCGIQDTNSKKQSDTHLEET






Specific examples of diagnostic anti-human PD-L1 mAbs useful as diagnostic mAbs for immunohistochemistry (IHC) detection of PD-L1 expression in formalin-fixed, paraffin-embedded (FFPE) tumor tissue sections are antibody 20C3 and antibody 22C3, which are described in WO2014/100079. Another anti-human PD-L1 mAb that has been reported to be useful for IHC detection of PD-L1 expression in FFPE tissue sections (Chen, B. J. et al., Clin Cancer Res 19: 3462-3473 (2013)) is a rabbit anti-human PD-L1 mAb publicly available from Sino Biological, Inc. (Beijing, P. R. China; Catalog number 10084-R015).









TABLE 2







Characteristics of Monoclonal Antibody MEB037.22C3 (22C3)











SEQ ID


Antibody Feature
Amino Acid Sequence
NO










Light Chain









CDRL1
KSSQSLLHTSTRKNYLA
13


CDRL2
WASTRES
14


CDRL3
KQSYDVVT
15


Mature Variable Region
DIVMSQSPSSLAVSAGEKVTMTCKSSQSLLHTSTRKNYLAWYQ
16



QKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAE




DLAVYYCKQSYDVVTFGAGTKLELK











Heavy Chain









CDRH1 Kabat Def'n
SYWIH
17


CDRH1 Chothia Def'n
GYTFTSYWIH
18


CDRH2
YINPSSGYHEYNQKFID
19


CDRH3
SGWLIHGDYYFDF
20


Mature Variable Region
XVHLQQSGAELAKPGASVKMSCKASGYTFTSYWIHWIKQRPG
21



QGLEWIGYINPSSGYHEYNQKFIDKATLTADRSSSTAYMHLTSL




TSEDSAVYYCARSGWLIHGDYYFDFWGQGTTLTVSS,




wherein X = Q or pE (pyro-glutamate)









“PD-L1” or “PD-L2” expression as used herein means any detectable level of expression of the designated PD-L protein on the cell surface or of the designated PD-L mRNA within a cell or tissue. PD-L protein expression may be detected with a diagnostic PD-L antibody in an IHC assay of a tumor tissue section or by flow cytometry. Alternatively, PD-L protein expression by tumor cells may be detected by PET imaging, using a binding agent (e.g., antibody fragment, affibody and the like) that specifically binds to the desired PD-L target, e.g., PD-L1 or PD-L2. Techniques for detecting and measuring PD-L mRNA expression include RT-PCR, realtime quantitative RT-PCR, RNAseq, and the Nanostring platform (J. Clin. Invest. 2017; 127(8):2930-2940).


Several approaches have been described for quantifying PD-L1 protein expression in IHC assays of tumor tissue sections. See, e.g., Thompson, R. H., et al., PNAS 101 (49); 17174-17179 (2004); Thompson, R. H. et al., Cancer Res. 66:3381-3385 (2006); Gadiot, J., et al., Cancer 117:2192-2201 (2011); Taube, J. M. et al., Sci Transl Med 4, 127ra37 (2012); and Toplian, S. L. et al., New Eng. J Med. 366 (26): 2443-2454 (2012). See US 20170285037 which describes Hematoxylin and Eosin staining used by the pathologist.


One approach employs a simple binary end-point of positive or negative for PD-L1 expression, with a positive result defined in terms of the percentage of tumor cells that exhibit histologic evidence of cell-surface membrane staining. A tumor tissue section is counted as positive for PD-L1 expression if it is at least 1% of total tumor cells.


In another approach, PD-L1 expression in the tumor tissue section is quantified in the tumor cells as well as in infiltrating immune cells, which predominantly comprise lymphocytes. The percentage of tumor cells and infiltrating immune cells that exhibit membrane staining are separately quantified as <5%, 5 to 9%, and then in 10% increments up to 100%. PD-L1 expression in the immune infiltrate is reported as a semi-quantitative measurement called the adjusted inflammation score (AIS), which is determined by multiplying the percent of membrane staining cells by the intensity of the infiltrate, which is graded as none (0), mild (score of 1, rare lymphocytes), moderate (score of 2, focal infiltration of tumor by lymphohistiocytic aggregates), or severe (score of 3, diffuse infiltration). A tumor tissue section is counted as positive for PD-L1 expression by immune infiltrates if the AIS is ≥5.


The level of PD-L mRNA expression may be compared to the mRNA expression levels of one or more reference genes that are frequently used in quantitative RT-PCR.


In some embodiments, a level of PD-L1 expression (protein and/or mRNA) by malignant cells and/or by infiltrating immune cells within a tumor is determined to be “overexpressed” or “elevated” based on comparison with the level of PD-L1 expression (protein and/or mRNA) by an appropriate control. For example, a control PD-L1 protein or mRNA expression level may be the level quantified in nonmalignant cells of the same type or in a section from a matched normal tissue. In some preferred embodiments, PD-L1 expression in a tumor sample is determined to be elevated if PD-L1 protein (and/or PD-L1 mRNA) in the sample is at least 10%, 20%, or 30% greater than in the control.


“Tumor Proportion Score (TPS)” refers to the percentage of tumor cells expressing PD-L1 on the cell membrane at any intensity (weak, moderate or strong). Linear partial or complete cell membrane staining is interpreted as positive for PD-L1.


“Mononuclear inflammatory density score (MIDS)” refers to the ratio of the number of PD-L1 expressing mononuclear inflammatory cells (MIC) infiltrating or adjacent to the tumor (small and large lymphocytes, monocytes, and macrophages within the tumor nests and the adjacent supporting stroma) compared to the total number of tumor cells. The MIDS is recorded at a scale from 0 to 4 with 0=none; 1=present, but less than one MIC for every 100 tumor cells (<1%); 2=at least one MIC for every 100 tumor cells, but less than one MIC per 10 tumor cells (1-9%); 3=at least one MIC for every 10 tumor cells, but fewer MIC's than tumor cells (10-99%); 4=at least as many MIC's as tumor cells (2100%).


“Combined positive score (CPS)” refers to the ratio of the number of PD-L1 positive tumor cells and PD-L1 positive mononuclear inflammatory cells (MIC) within the tumor nests and the adjacent supporting stroma (numerator) compared to the total number of tumor cells (denominator; i.e., the number of PD-L1 positive and PD-L1 negative tumor cells). PD-L1 expression at any intensity is considered positive, i.e., weak (1+), moderate (2+), or strong (3+).


“PD-L1 expression positive” refers to a Tumor Proportion Score, Mononuclear Inflammatory Density Score or Combined Positive Score of at least 1%; AIS is ≥5; or elevated level of PD-L1 expression (protein and/or mRNA) by malignant cells and/or by infiltrating immune cells within a tumor compared to an appropriate control.


“DSDR” or “Durable Stable Disease Rate” means SD for ≥23 weeks.


“Framework region” or “FR” as used herein means the immunoglobulin variable regions excluding the CDR regions.


“Kabat” as used herein means an immunoglobulin alignment and numbering system pioneered by Elvin A. Kabat ((1991) Sequences of Proteins of Immunological Interest, 5th Ed. Public Health Service, National Institutes of Health, Bethesda, Md.).


“LAG3 antagonist” means any chemical compound or biological molecule that blocks binding of LAG3 expressed on an immune cell (T cell, Tregs, or NK cell etc.) to MHC Class II molecules. Human LAG3 comprises the amino acid sequence:











(SEQ ID NO: 33)



MWEAQFLGLL FLQPLWVAPV KPLQPGAEVP VVWAQEGAPA







QLPCSPTIPL QDLSLLRRAG VTWQHQPDSG PPAAAPGHPL







APGPHPAAPS SWGPRPRRYT VLSVGPGGLR SGRLPLQPRV







QLDERGRQRG DFSLWLRPAR RADAGEYRAA VHLRDRALSC







RLRLRIGQAS MTASPPGSLR ASDWVILNCS FSRPDRPASV







HWFRNRGQGR VPVRESPHHH LAESFLFLPQ VSPMDSGPWG







CILTYRDGFN VSIMYNLTVL GLEPPTPLTV YAGAGSRVGL







PCRLPAGVGT RSFLTAKWTP PGGGPDLLVT GDNGDFTLRL







EDVSQAQAGT YTCHIHLQEQ QLNATVTLAI ITVTPKSFGS







PGSLGKLLCE VTPVSGQERF VWSSLDTPSQ RSFSGPWLEA







QEAQLLSQPW QCQLYQGERL LGAAVYFTEL SSPGAQRSGR







APGALPAGHL LLFLILGVLS LLLLVTGAFG FHLWRRQWRP







RRFSALEQGI HPPQAQSKIE ELEQEPEPEP EPEPEPEPEP







EPEQL; see also Uniprot accession no. P18627.






“Microsatellite instability (MSI)” refers to the form of genomic instability associated with defective DNA mismatch repair in tumors. See Boland et al., Cancer Research 58, 5258-5257, 1998. In one embodiment, MSI analysis can be carried out using the five National Cancer Institute (NCI) recommended microsatellite markers: BAT25 (GenBank accession no. 9834508), BAT26 (GenBank accession no. 9834505), D5S346 (GenBank accession no. 181171), D2S123 (GenBank accession no. 187953), D17S250 (GenBank accession no. 177030). Additional markers for example, BAT40, BAT34C4, TGF-β-RII and ACTC can be used. Commercially available kits for MSI analysis include, for example, the Promega MSI multiplex PCR assay, FoundationOnet CD® (F1 CDx) next generation sequencing based in vitro diagnostic device using DNA isolated from formalin-fixed, paraffin-embedded (FFPE) tumor tissue specimens.


“High frequency microsatellite instability” or “microsatellite instability-high (MSI-H)” refers to if two or more of the five NCI markers indicated above show instability or ≥30-40% of the total markers demonstrate instability (i.e. have insertion/deletion mutations).


“Low frequency microsatellite instability” or “microsatellite instability-low (MSI-L)” refers to if one of the five NCI markers indicated above show instability or <30-40% of the total markers exhibit instability (i.e. have insertion/deletion mutations).


“Non-MSI-H colorectal cancer” as used herein refers to microsatellite stable (MSS) and low frequency MSI (MSI-L) colorectal cancer.


“Microsatellite Stable (MSS)” refers to if none of the five NCI markers indicated above show instability (i.e. have insertion/deletion mutations)


“Proficient mismatch repair (pMMR) colorectal cancer” refers to normal expression of MMR proteins (MLH1, PMS2, MSH2, and MSH6) in a CRC tumor specimen by IHC. Commercially available kits for MMR analysis include the Ventana MMR IHC assay.


“Mismatch repair deficient (dMMR) colorectal cancer” refers to low expression of one or more MMR protein(s) (MLH1, PMS2, MSH2, and MSH6) in a CRC tumor specimen by IHC.


“Monoclonal antibody” or “mAb” or “Mab”, as used herein, refers to a population of substantially homogeneous antibodies, i.e., the antibody molecules comprising the population are identical in amino acid sequence except for possible naturally occurring mutations that may be present in minor amounts. In contrast, conventional (polyclonal) antibody preparations typically include a multitude of different antibodies having different amino acid sequences in their variable domains, particularly their CDRs, which are often specific for different epitopes. The modifier “monoclonal” indicates the character of the antibody as being obtained from a substantially homogeneous population of antibodies, and is not to be construed as requiring production of the antibody by any particular method. For example, the monoclonal antibodies to be used in accordance with the present invention may be made by the hybridoma method first described by Kohler et al. (1975) Nature 256: 495, or may be made by recombinant DNA methods (see, e.g., U.S. Pat. No. 4,816,567). The “monoclonal antibodies” may also be isolated from phage antibody libraries using the techniques described in Clackson et al. (1991) Nature 352: 624-628 and Marks et al. (1991) J. Mol. Biol. 222: 581-597, for example. See also Presta (2005) J. Allergy Clin. Immunol. 116:731.


“Non-responder patient”, when referring to a specific anti-tumor response to treatment with a combination therapy described herein, means the patient did not exhibit the anti-tumor response.


“ORR” or “objective response rate” refers in some embodiments to CR+PR, and ORR(week 24) refers to CR and PR measured using irRECIST in each patient in a cohort after 24 weeks of anti-cancer treatment.


“Patient” or “subject” refers to any single subject for which therapy is desired or that is participating in a clinical trial, epidemiological study or used as a control, including humans and mammalian veterinary patients such as cattle, horses, dogs, and cats.


“PD-1 antagonist” means any chemical compound or biological molecule that blocks binding of PD-L1 expressed on a cancer cell to PD-1 expressed on an immune cell (T cell, B cell or NKT cell) and preferably also blocks binding of PD-L2 expressed on a cancer cell to the immune-cell expressed PD-1, with the proviso that the anti-PD-L1 antibody is not atezolizumab. Alternative names or synonyms for PD-1 and its ligands include: PDCD1, PD1, CD279 and SLEB2 for PD-1; PDCD1L1, PDL1, B7H1, B7-4, CD274 and B7-H for PD-L1; and PDCD1L2, PDL2, B7-DC, Btdc and CD273 for PD-L2. In any of the treatment method, medicaments and uses of the present invention in which a human individual is being treated, the PD-1 antagonist blocks binding of human PD-L1 to human PD-1, and preferably blocks binding of both human PD-L1 and PD-L2 to human PD-1. Human PD-1 amino acid sequences can be found in NCBI Locus No.: NP_005009. Human PD-L1 and PD-L2 amino acid sequences can be found in NCBI Locus No.: NP_054862 and NP_079515, respectively.


As used herein, a “pembrolizumab variant” means a monoclonal antibody that comprises heavy chain and light chain sequences that are substantially identical to those in pembrolizumab, except for having three, two or one conservative amino acid substitutions at positions that are located outside of the light chain CDRs and six, five, four, three, two or one conservative amino acid substitutions that are located outside of the heavy chain CDRs, e.g, the variant positions are located in the FR regions or the constant region, and optionally has a deletion of the C-terminal lysine residue of the heavy chain. In other words, pembrolizumab and a pembrolizumab variant comprise identical CDR sequences, but differ from each other due to having a conservative amino acid substitution at no more than three or six other positions in their full length light and heavy chain sequences, respectively. A pembrolizumab variant is substantially the same as pembrolizumab with respect to the following properties: binding affinity to PD-1 and ability to block the binding of each of PD-L1 and PD-L2 to PD-1.


“RECIST 1.1 Response Criteria” as used herein means the definitions set forth in Eisenhauer et al., E. A. et al., Eur. J Cancer 45:228-247 (2009) for target lesions or nontarget lesions, as appropriate based on the context in which response is being measured.


“Responder patient” when referring to a specific anti-tumor response to treatment with a combination therapy described herein, means the patient exhibited the anti-tumor response.


“Sustained response” means a sustained therapeutic effect after cessation of treatment with a therapeutic agent, or a combination therapy described herein. In some embodiments, the sustained response has a duration that is at least the same as the treatment duration, or at least 1.5, 2.0, 2.5 or 3 times longer than the treatment duration.


“Tissue Section” refers to a single part or piece of a tissue sample, e.g., a thin slice of tissue cut from a sample of a normal tissue or of a tumor.


“Treat” or “treating” cancer as used herein means to administer a combination therapy comprising a PD-1 antagonist, LAG3 antagonist and lenvatinib to a subject having cancer, or diagnosed with cancer, to achieve at least one positive therapeutic effect, such as for example, reduced number of cancer cells, reduced tumor size, reduced rate of cancer cell infiltration into peripheral organs, or reduced rate of tumor metastasis or tumor growth. Positive therapeutic effects in cancer can be measured in a number of ways (See, W. A. Weber, J Nucl. Med. 50:1S-10S (2009)). For example, with respect to tumor growth inhibition, according to NCI standards, a T/C≤42% is the minimum level of anti-tumor activity. A T/C<10% is considered a high anti-tumor activity level, with T/C (%)=Median tumor volume of the treated/Median tumor volume of the control×100. In some embodiments, response to a combination therapy described herein is assessed using RECIST 1. I criteria or irRC (bidimensional or unidimensional) and the treatment achieved by a combination of the invention is any of PR. CR, OR, PFS, DFS and OS. PFS, also referred to as “Time to Tumor Progression” indicates the length of time during and after treatment that the cancer does not grow, and includes the amount of time patients have experienced a CR or PR, as well as the amount of time patients have experienced SD. DFS refers to the length of time during and after treatment that the patient remains free of disease. OS refers to a prolongation in life expectancy as compared to naive or untreated individuals or patients. In some embodiments, response to a combination of the invention is any of PR, CR, PFS, DFS, OR and OS that is assessed using RECIST 1.1 response criteria. The treatment regimen for a combination of the invention that is effective to treat a cancer patient may vary according to factors such as the disease state, age, and weight of the patient, and the ability of the therapy to elicit an anti-cancer response in the subject. While an embodiment of any of the aspects of the invention may not be effective in achieving a positive therapeutic effect in every subject, it should do so in a statistically significant number of subjects as determined by any statistical test known in the art such as the Student's t-test, the chi2-test, the U-test according to Mann and Whitney, the Kruskal-Wallis test (H-test), Jonckheere-Terpstra-test and the Wilcoxon-test.


The terms “treatment regimen”. “dosing protocol” and “dosing regimen” are used interchangeably to refer to the dose and timing of administration of each therapeutic agent in a combination of the invention.


“Tumor” as it applies to a subject diagnosed with, or suspected of having, cancer refers to a malignant or potentially malignant neoplasm or tissue mass of any size, and includes primary tumors and secondary neoplasms. A solid tumor is an abnormal growth or mass of tissue that usually does not contain cysts or liquid areas. Different types of solid tumors are named for the type of cells that form them. Examples of solid tumors are sarcomas, carcinomas, and lymphomas. Leukemias (cancers of the blood) generally do not form solid tumors (National Cancer Institute, Dictionary of Cancer Terms).


“Tumor burden” also referred to as “tumor load”, refers to the total amount of tumor material distributed throughout the body. Tumor burden refers to the total number of cancer cells or the total size of tumor(s), throughout the body, including lymph nodes and bone marrow. Tumor burden can be determined by a variety of methods known in the art, such as, e.g. by measuring the dimensions of tumor(s) upon removal from the subject, e.g., using calipers, or while in the body using imaging techniques, e.g., ultrasound, bone scan, computed tomography (CT) or magnetic resonance imaging (MRI) scans.


The term “tumor size” refers to the total size of the tumor which can be measured as the length and width of a tumor. Tumor size may be determined by a variety of methods known in the art, such as, e.g. by measuring the dimensions of tumor(s) upon removal from the subject, e.g., using calipers, or while in the body using imaging techniques, e.g., bone scan, ultrasound, CT or MRI scans.


“Unidimensional irRC” refers to the set of criteria described in Nishino M, Giobbie-Hurder A, Gargano M, Suda M, Ramaiya N H, Hodi F S. Developing a Common Language for Tumor Response to Immunotherapy: Immune-related Response Criteria using Unidimensional measurements. Clin Cancer Res. 2013; 19(14):3936-3943). These criteria utilize the longest diameter (cm) of each lesion.


“Variable regions” or “V region” as used herein means the segment of IgG chains which is variable in sequence between different antibodies. Typically, it extends to Kabat residue 109 in the light chain and 113 in the heavy chain.


PD-1 Antagonists and LAG3 Antagonists

PD-1 antagonists useful in the treatment method, medicaments and uses of the present invention include a monoclonal antibody (mAb), or antigen binding fragment thereof, that specifically binds to PD-1 or PD-L1, and preferably specifically binds to human PD-1 or human PD-L1. The mAb may be a human antibody, a humanized antibody or a chimeric antibody, and may include a human constant region. In some embodiments the human constant region is selected from the group consisting of IgG1, IgG2, IgG3 and IgG4 constant regions, and in preferred embodiments, the human constant region is an IgG1 or IgG4 constant region. In some embodiments, the antigen binding fragment is selected from the group consisting of Fab, Fab′-SH, F(ab′)2, scFv and Fv fragments.


Examples of mAbs that bind to human PD-1, and useful in the treatment method, medicaments and uses of the present invention, are described in U S. patent nos. U.S. Pat. Nos. 7,488,802, 7,521,051, 8,008,449, 8,354,509, and 8,168,757, and International application publn. nos. WO2004/004771, WO2004/072286, WO2004/056875, and US2011/0271358. Specific anti-human PD-1 mAbs useful as the PD-1 antagonist in the treatment method, medicaments and uses of the present invention include:pembrolizumab (also known as MK-3475), a humanized IgG4 mAb with the structure described in WHO Drug Information, Vol. 27, No. 2, pages 161-162 (2013) and that comprises the heavy and light chain amino acid sequences shown in Table 3; nivolumab (BMS-936558), a human IgG4 mAb with the structure described in WHO Drug Information, Vol. 27, No. 1, pages 68-69 (2013) and that comprises the heavy and light chain amino acid sequences shown in Table 3; the humanized antibodies h409A11, h409A16 and h409A17, which are described in WO2008/156712, and AMP-514, which is being developed by MedImmune; cemiplimab; camrelizumab; sintilimab; tislelizumab; and toripalimab. Additional anti-PD-1 antibodies contemplated for use herein include MED10680 (U.S. Pat. No. 8,609,089), BGB-A317 (U.S. Patent publ. no. 2015/0079109), INCSHR1210 (SHR-1210) (PCT International application publ. no. WO2015/085847), REGN-2810 (PCT Intemational application publ. no. WO2015/112800), PDR001 (PCT International application publ. no. WO2015/112900), TSR-042 (ANB011) (PCT International application publ. no. WO2014/179664) and STI-1110 (PCT International application pubi. no. WO2014/194302).


Examples of mAbs that bind to human PD-L1, and useful in the treatment method, medicaments and uses of the present invention, are described in U.S. Pat. No. 8,383,796. Specific anti-human PD-L1 mAbs useful as the PD-1 antagonist in the treatment method, medicaments and uses of the present invention include BMS-936559, MEDI4736, and MSB0010718C.


Other PD-1 antagonists useful in the treatment method, medicaments and uses of the present invention include an immunoadhesin that specifically binds to PD-1 or PD-L1, and preferably specifically binds to human PD-1 or human PD-L1, e.g., a fusion protein containing the extracellular or PD-1 binding portion of PD-L1 or PD-L2 fused to a constant region such as an Fc region of an immunoglobulin molecule. Examples of immunoadhesion molecules that specifically bind to PD-1 are described in PCT International appliction public. Nos. WO2010/027827 and WO2011/066342. Specific fusion proteins useful as the PD-1 antagonist in the treatment methods, medicaments and uses of the present invention include AMP-224 (also known as B7-DCIg), which is a PD-L2-FC fusion protein and binds to human PD-1.


In some preferred embodiments of the treatment methods, medicaments and uses of the present invention, the PD-1 antagonist is a monoclonal antibody, or antigen binding fragment thereof, that comprises: (a) a light chain variable region comprising light chain CDR1, CDR2 and CDR3 of SEQ ID NOs: 1, 2 and 3, respectively and (b) a heavy chain variable region comprising heavy chain CDR1, CDR2 and CDR3 of SEQ ID NOs: 6, 7 and 8, respectively.


In other preferred embodiments of the treatment methods, medicaments and uses of the present invention, the PD-1 antagonist is a monoclonal antibody, or antigen binding fragment thereof, that specifically binds to human PD-1 and comprises (a) a heavy chain variable region comprising SEQ ID NO:9 or a variant thereof, and (b) a light chain variable region comprising SEQ ID NO:4 or a variant thereof. A variant of a heavy chain variable region sequence is identical to the reference sequence except having up to six conservative amino acid substitutions in the framework region (i.e., outside of the CDRs). A variant of a light chain variable region sequence is identical to the reference sequence except having up to three conservative amino acid substitutions in the framework region (i.e., outside of the CDRs).


In another preferred embodiment of the treatment methods, medicaments and uses of the present invention, the PD-1 antagonist is a monoclonal antibody that specifically binds to human PD-1 and comprises (a) a heavy chain comprising SEQ ID NO: 10 and (b) a light chain comprising SEQ ID NO:5. In one embodiment, the PD-1 antagonist is an anti-PD-1 antibody that comprises a heavy chain and a light chain, and wherein the heavy and light chains comprise the amino acid sequences in SEQ ID NO:10 and SEQ ID NO:5, respectively.


In yet another preferred embodiment of the treatment methods, medicaments and uses of the present invention, the PD-1 antagonist is a monoclonal antibody that specifically binds to human PD-1 and comprises (a) a heavy chain comprising SEQ ID NO: 12 and (b) a light chain comprising SEQ ID NO:11.


In all of the above treatment methods, medicaments and uses, the PD-1 antagonist inhibits the binding of PD-L1 to PD-1, and preferably also inhibits the binding of PD-L2 to PD-1. In some embodiments of the above treatment methods, medicaments and uses, the PD-1 antagonist is a monoclonal antibody, or an antigen binding fragment thereof, that specifically binds to PD-1 or to PD-L1 and blocks the binding of PD-L1 to PD-1.


Table 3 below provides a list of the amino acid sequences of exemplary anti-PD-1 mAbs for use in the treatment method, medicaments and uses of the present invention.









TABLE 3







Exemplary PD-1 Antibody Sequences









Antibody

SEQ ID


Feature
Amino Acid Sequence
NO.










Pembrolizumab Light Chain









CDR1
RASKGVSTSGYSYLH
1


CDR2
LASYLES
2


CDR3
QHSRDLPLT
3


Variable
EIVLTQSPATLSLSPGERATLSCRASKGVSTSGYSYLHWY
4


Region
QQKPGQAPRLLIYLASYLESGVPARFSGSGSGTDFTLTISS




LEPEDFAVYYCQHSRDLPLTFGGGTKVEIK



Light Chain
EIVLTQSPATLSLSPGERATLSCRASKGVSTSGYSYLHWY
5



QQKPGQAPRLLIYLASYLESGVPARFSGSGSGTDFTLTISS




LEPEDFAVYYCQHSRDLPLTFGGGTKVEIKRTVAAPSVFI




FPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQ




SGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYAC




EVTHQGLSSPVTKSFNRGEC











Pembrolizumab Heavy Chain









CDR1
NYYMY
6


CDR2
GINPSNGGTNFNEKFKN
7


CDR3
RDYRFDMGFDY
8


Variable
QVQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWV
9


Region
RQAPGQGLEWMGGINPSNGGTNFNEKFKNRVTLTTDSST




TTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQG




TTVTVSS



Heavy
QVQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWV
10


Chain
RQAPGQGLEWMGGINPSNGGTNFNEKFKNRVTLTTDSST




TTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQG




TTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYF




PEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPS




SSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPPCPAP




EFLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPE




VQFNWYVDGVEVHNAKTKPREEQFNSTYRVVSVLTVLH




QDWLNGKEYKCKVSNKGLPSSIEKTISKAKGQPREPQVY




TLPPSQEEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPE




NNYKTTPPVLDSDGSFFLYSRLTVDKSRWQEGNVFSCSV




MHEALHNHYTQKSLSLSLGK











Nivolumab Light Chain









Light Chain
EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKP
11



GQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPE




DFAVYYCQQSSNWPRTFGQGTKVEIKRTVAAPSVFIFPPS




DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS




QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTH




QGLSSPVTKSFNRGEC











Nivolumab Heavy Chain









Heavy
QVQLVESGGGVVQPGRSLRLDCKASGITFSNSGMHWVR
12


Chain
QAPGKGLEWVAVIWYDGSKRYYADSVKGRFTISRDNSK




NTLFLQMNSLRAEDTAVYYCATNDDYWGQGTLVTVSSA




STKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSW




NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTY




TCNVDHKPSNTKVDKRVESKYGPPCPPCPAPEFLGGPSVF




LFPPKPKDTLMISRTPEVTCVVVDVSQEDPEVQFNWYVD




GVEVHNAKTKPREEQFNSTYRVVSVLTVLHQDWLNGKE




YKCKVSNKGLPSSIEKTISKAKGQPREPQVYTLPPSQEEM




TKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPV




LDSDGSFFLYSRLTVDKSRWQEGNVFSCSVMHEALHNH




YTQKSLSLSLGK









LAG3 antagonists useful in the treatment method, medicaments and uses of the present invention include a monoclonal antibody (mAb), or antigen binding fragment thereof, that specifically binds to LAG3. The mAb may be a human antibody, a humanized antibody or a chimeric antibody, and may include a human constant region. In some embodiments the human constant region is selected from the group consisting of IgG1, IgG2, IgG3 and IgG4 constant regions, and in preferred embodiments, the human constant region is an IgG1 or IgG4 constant region. In some embodiments, the antigen binding fragment is selected from the group consisting of Fab, Fab′-SH, F(ab′)2, scFv and Fv fragments.


In one embodiment, the anti-LAG3 antibody is Ab6: an antibody consisting of two light chains and two heavy chains, each light chain and heavy chain consisting of the following amino









light chain


(SEQ ID NO: 22)


DIVMTQTPLSLSVTPGQPASISCKASQSLDYEGDSDMNWYLQKPGQPPQL


LIYGASNLESGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCQQSTEDPR


TFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKV


QWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEV


THQGLSSPVTKSFNRGEC;


and





heavy chain


(SEQ ID NO: 23)


QMQLVQSGPEVKKPGTSVKVSCKASGYTFTDYNVDWVRQARGQRLEWIGD


INPNDGGTIYAQKFQERVTITVDKSTSTAYMELSSLRSEDTAVYYCARNY


RWFGAMDHWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKD


YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTY


TCNVDHKPSNTKVDKRVESKYGPPCPPCPAPEFLGGPSVFLFPPKPKDTL


MISRTPEVTCVVVDVSQEDPEVQFNWYVDGVEVHNAKTKPREEQFNSTYR


VVSVLTVLHQDWLNGKEYKCKVSNKGLPSSIEKTISKAKGQPREPQVYTL


PPSQEEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSD


GSFFLYSRLTVDKSRWQEGNVFSCSVMHEALHNHYTQKSLSLSLGK.





Ab6 light chain variable domain amino acid


sequence:


(SEQ ID NO: 24)


DIVMTQTPLSLSVTPGQPASISCKASQSLDYEGDSDMNWYLQKPGQPPQL


LIYGASNLESGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCQQSTEDPR


TFGGGTKVEIK;


and





Ab6 heavy chain variable domain amino acid


sequence:


(SEQ ID NO: 25)


QMQLVQSGPEVKKPGTSVKVSCKASGYTFTDYNVDWVRQARGQRLEWIGD


INPNDGGTIYAQKFQERVTITVDKSTSTAYMELSSLRSEDTAVYYCARNY


RWFGAMDHWGQGTTVTVSS.





Ab6 CDRs:


CDR-L1:


(SEQ ID NO: 26)


KASQSLDYEGDSDMN;





CDR-L2:


(SEQ ID NO: 27)


GASNLES;





CDR-L3:


(SEQ ID NO: 28)


QQSTEDPRT;





CDR-H1:


(SEQ ID NO: 29)


DYNVD;





CDR-H2:


(SEQ ID NO: 30)


DINPNDGGTIYAQKFQE;


and





CDR-H3:


(SEQ ID NO: 31)


NYRWFGAMDH






In some preferred embodiments of the treatment methods, medicaments and uses of the present invention, the LAG3 antagonist is a monoclonal antibody, or antigen binding fragment thereof, that comprises: (a) light chain CDRs SEQ ID NOs: 26, 27 and 28 and (b) heavy chain CDRs SEQ ID NOs: 29, 30 and 31.


In other preferred embodiments of the treatment methods, medicaments and uses of the present invention, the LAG3 antagonist is a monoclonal antibody, or antigen binding fragment thereof, that specifically binds to human LAG3 and comprises (a) a heavy chain variable region comprising SEQ ID NO:25 or a variant thereof, and (b) a light chain variable region comprising SEQ ID NO:24 or a variant thereof. A variant of a heavy chain variable region sequence is identical to the reference sequence except having up to 5 conservative amino acid substitutions in the framework region (i.e., outside of the CDRs). A variant of a light chain variable region sequence is identical to the reference sequence except having up to three conservative amino acid substitutions in the framework region (i.e., outside of the CDRs).


In another preferred embodiment of the treatment methods, medicaments and uses of the present invention, the LAG3 antagonist is a monoclonal antibody that specifically binds to human LAG3 and comprises (a) a heavy chain comprising SEQ ID NO: 23 and (b) a light chain comprising SEQ ID NO:22. In another preferred embodiment of the treatment methods, medicaments and uses of the present invention, the LAG3 antagonist is a monoclonal antibody that specifically binds to human LAG3 and comprises (a) a heavy chain variable region comprising SEQ ID NO: 25 and (b) a light chain variable region comprising SEQ ID NO:24.


Other examples of mAbs that bind to human LAG3, and are useful in the treatment methods, medicaments and uses of the present invention, are relatlimab disclosed in International patent application publication no. WO2014/008218 as LAG3.5 (WHO Drug Information, Vol. 32, No. 2, 2018), IMP731, IMP701, and the anti-LAG3 antibodies disclosed in U.S. patent application publication no. US2017101472. Other LAG3 antagonists useful in the treatment method, medicaments and uses of the present invention include an immunoadhesin that specifically binds to human LAG3, e.g., a fusion protein containing the extracellular LAG3 fused to a constant region such as an Fc region of an immunoglobulin molecule.


In one embodiment, each of the anti-PD-1 or anti-LAG3 antibodies or antigen-binding fragments thereof comprises a heavy chain constant region, e.g. a human constant region, such as γ1, γ2, γ3, or γ4 human heavy chain constant region or a variant thereof. In another embodiment, each of the anti-PD-1 or anti-LAG3 antibodies or antigen-binding fragments thereof comprises a light chain constant region, e.g. a human light chain constant region, such as lambda or kappa human light chain region or a variant thereof. By way of example, and not limitation, the human heavy chain constant region can be γ4 and the human light chain constant region can be kappa. In an alternative embodiment, the Fc region of the antibody is γ4 with a Ser228Pro mutation (Schuurman. J et. al., Mol. Immunol. 38: 1-8, 2001).


In some embodiments, different constant domains may be appended to humanized VL and VH regions derived from the CDRs provided herein. For example, if a particular intended use of an antibody (or fragment) of the present invention were to call for altered effector functions, a heavy chain constant domain other than human IgG1 may be used, or hybrid IgG1/IgG4 may be utilized.


Although human IgG1 antibodies provide for long half-life and for effector functions, such as complement activation and antibody-dependent cellular cytotoxicity, such activities may not be desirable for all uses of the antibody. In such instances a human IgG4 constant domain, for example, may be used. The present invention includes the use of anti-PD-1 antibodies or anti-LAG3 antibodies and antigen-binding fragments thereof which comprise an IgG4 constant domain. In one embodiment, the IgG4 constant domain can differ from the native human IgG4 constant domain (Swiss-Prot Accession No. P01861.1) at a position corresponding to position 228 in the EU system and position 241 in the KABAT system, where the native Ser108 is replaced with Pro, in order to prevent a potential inter-chain disulfide bond between Cys106 and Cys109 (corresponding to positions Cys 226 and Cys 229 in the EU system and positions Cys 239 and Cys 242 in the KABAT system) that could interfere with proper intra-chain disulfide bond formation. &e Angal et al. (1993) Mol. Imunol. 30:105. In other instances, a modified IgG1 constant domain which has been modified to increase half-life or reduce effector function can be used.


Methods, Uses and Medicaments

In one embodiment, the invention provides a method for treating cancer in an individual comprising co-administering to the individual a PD-1 antagonist, LAG3 antagonist and lenvatinib or a pharmaceutically acceptable salt thereof. In another embodiment, the invention provides a method for treating cancer in an individual comprising administering to the individual a composition comprising a PD-1 antagonist and a LAG3 antagonist and a composition comprising lenvatinib or a pharmaceutically acceptable salt thereof.


In another embodiment, the invention provides a medicament comprising a PD-1 antagonist for use in combination with a LAG3 antagonist and lenvatinib or a pharmaceutically acceptable salt thereof for treating cancer. In yet another embodiment, the invention provides a medicament comprising a LAG3 antagonist for use in combination with a PD-1 antagonist and lenvatinib or a pharmaceutically acceptable salt thereof for treating cancer. In yet another embodiment, the invention provides a medicament comprising lenvatinib or a pharmaceutically acceptable salt thereof for use in combination with a PD-1 antagonist and LAG3 antagonist for treating cancer.


In another embodiment, the invention provides for the use of a PD-1 antagonist in the manufacture of a medicament for treating cancer in an individual when administered in combination with a LAG3 antagonist and lenvatinib or a pharmaceutically acceptable salt thereof. In one embodiment, the invention provides for the use of a LAG3 antagonist in the manufacture of a medicament for treating cancer in an individual when administered in combination with a PD-1 antagonist and lenvatinib or a pharmaceutically acceptable salt thereof. In another embodiment, the invention provides for the use of lenvatinib or a pharmaceutically acceptable salt thereof in the manufacture of a medicament for treating cancer in an individual when administered in combination with a LAG3 antagonist and PD-1 antagonist.


Other embodiments provide a LAG3 antagonist for use in the treatment of cancer, wherein the use is in combination with a PD-1 antagonist and lenvatinib or a pharmaceutically acceptable salt thereof; a PD-1 antagonist for use in the treatment of cancer, wherein the use is in combination with a LAG3 antagonist and lenvatinib or a pharmaceutically acceptable salt thereof; Lenvatinib or a pharmaceutically acceptable salt thereof for use in the treatment of cancer, wherein the use is in combination with a PD-1 antagonist and a LAG3 antagonist.


In a still further embodiment, the invention provides use of a PD-1 antagonist and a LAG3 antagonist in the manufacture of a medicament for treating cancer in an individual when administered in combination with lenvatinib or a pharmaceutically acceptable salt thereof. In yet another embodiment, the invention provides a medicament comprising a PD-1 antagonist and a LAG3 antagonist for use in combination with lenvatinib or a pharmaceutically acceptable salt thereof for treating cancer.


In the foregoing methods, medicaments and uses, in one embodiment, the PD-1 antagonist and LAG3 antagonist are co-formulated, and administered via intravenous infusion or subcutaneous injection. In another embodiment, the PD-1 antagonist and LAG3 antagonist are co-administered via intravenous infusion or subcutaneous injection.


In one embodiment, the PD-1 antagonist is an anti-PD-1 antibody that blocks the binding of PD-1 to PD-L1 and PD-L2. In one embodiment, the PD-1 antagonist is an anti-PD-L1 antibody. In one embodiment, the LAG3 antagonist is an anti-LAG3 antibody that blocks the binding of LAG3 to MHC Class II. In one embodiment, the pharmaceutically acceptable salt of lenvatinib is lenvatinib mesylate.


Cancers that may be treated by the methods, medicaments and uses of the invention include, but are not limited to: Cardiac cancers: sarcoma (angiosarcoma, fibrosarcoma, rhabdomyosarcoma, liposarcoma), myxoma, rhabdomyoma, fibroma, lipoma and teratoma; Lung cancers: bronchogenic carcinoma (squamous cell, undifferentiated small cell, undifferentiated large cell, adenocarcinoma), alveolar (bronchiolar) carcinoma, bronchial adenoma, sarcoma, lymphoma, chondromatous hamartoma, mesothelioma; Gastrointestinal cancers: esophagus (squamous cell carcinoma, adenocarcinoma, leiomyosarcoma, lymphoma), stomach (carcinoma, lymphoma, leiomyosarcoma), pancreas (ductal adenocarcinoma, insulinoma, glucagonoma, gastrinoma, carcinoid tumors, vipoma), small bowel (adenocarcinoma, lymphoma, carcinoid tumors, Karposi's sarcoma, leiomyoma, hemangioma, lipoma, neurofibroma, fibroma), large bowel (adenocarcinoma, tubular adenoma, villous adenoma, hamartoma, leiomyoma) colorectal; Genitourinary tract cancers: kidney (adenocarcinoma, Wilm's tumor (nephroblastoma), lymphoma, leukemia), bladder and urethra (squamous cell carcinoma, transitional cell carcinoma, adenocarcinoma), prostate (adenocarcinoma, sarcoma), testis (seminoma, teratoma, embryonal carcinoma, teratocarcinoma, choriocarcinoma, sarcoma, interstitial cell carcinoma, fibroma, fibroadenoma, adenomatoid tumors, lipoma); Liver cancers: hepatoma (hepatocellular carcinoma), cholangiocarcinoma, hepatoblastoma, angiosarcoma, hepatocellular adenoma, hemangioma; Bone cancers: osteogenic sarcoma (osteosarcoma), fibrosarcoma, malignant fibrous histiocytoma, chondrosarcoma. Ewing's sarcoma, malignant lymphoma (reticulum cell sarcoma), multiple myeloma, malignant giant cell tumor chordoma, osteochronfroma (osteocartilaginous exostoses), benign chondroma, chondroblastoma, chondromyxofibroma, osteoid osteoma and giant cell tumors; Nervous system cancers: skull (osteoma, hemangioma, granuloma, xanthoma, osteitis deformans), meninges (meningioma, meningiosarcoma, gliomatosis), brain (astrocytoma, medulloblastoma, glioma, ependymoma, germinoma (pinealoma), glioblastoma multiform, oligodendroglioma, schwannoma, retinoblastoma, congenital tumors), spinal cord neurofibroma, meningioma, glioma, sarcoma); Gynecological cancers: uterus (endometrial carcinoma), cervix (cervical carcinoma, pre-tumor cervical dysplasia), ovaries (ovarian carcinoma (serous cystadenocarcinoma, mucinous cystadenocarcinoma, unclassified carcinoma), granulosa-thecal cell tumors, Sertoli-Leydig cell tumors, dysgerminoma, malignant teratoma), vulva (squamous cell carcinoma, intraepithelial carcinoma, adenocarcinoma, fibrosarcoma, melanoma), vagina (clear cell carcinoma, squamous cell carcinoma, botryoid sarcoma (embryonal rhabdomyosarcoma), fallopian tubes (carcinoma), breast; Hematologic cancers; blood (myeloid leukemia (acute and chronic), acute lymphoblastic leukemia, chronic lymphocytic leukemia, myeloproliferative diseases, multiple myeloma, myelodysplastic syndrome); hematopoietic tumors of the lymphoid lineage, including leukemia, acute lymphocytic leukemia, chronic lymphocytic leukemia, acute lymphoblastic leukemia, B-cell lymphoma, T-cell lymphoma, Hodgkins lymphoma, non-Hodgkins lymphoma, hairy cell lymphoma, mantle cell lymphoma, myeloma, and Burkett's lymphoma; hematopoetic tumors of myeloid lineage, including acute and chronic myelogenous leukemias, myelodysplastic syndrome and promyelocytic leukemia; tumors of mesenchymal origin, including fibrosarcoma and rhabdomyosarcoma; tumors of the central and peripheral nervous system, including astrocytoma, neuroblastoma, glioma, and schwannomas; and other tumors, including melanoma, skin (non-melanomal) cancer, mesothelioma (cells), seminoma, teratocarcinoma, osteosarcoma, xenoderoma pigmentosum, keratoctanthoma, thyroid follicular cancer and Kaposi's sarcoma. In one embodiment, the forgoing cancers are advanced, unresectable or metastatic.


In one embodment, cancers that may be treated by the methods, medicaments and uses of the invention include, but are not limited to: lung cancer, pancreatic cancer, colon cancer, colorectal cancer, myeloid leukemias, acute myelogenous leukemia, chronic myelogenous leukemia, chronic myelomonocytic leukemia, thyroid cancer, myelodysplastic syndrome, bladder carcinoma, epidermal carcinoma, melanoma, breast cancer, prostate cancer, head and neck cancers, ovarian cancer, brain cancers, cancers of mesenchymal origin, sarcomas, tetracarcinomas, neuroblastomas, kidney carcinomas, hepatomas, non-Hodgkin's lymphoma, multiple myeloma, and anaplastic thyroid carcinoma.


In another embodiment, cancers that may be treated by the methods, medicaments and uses of the invention include, but are not limited to: head and neck squamous cell cancer, gastric cancer, adenocarcinoma of the stomach and/or gastric-esophageal junction, renal cell cancer, fallopian tube cancer, endometrial cancer, and colorectal cancer. In one embodiment, the colorectal cancer, gastric cancer, adenocarcinoma of the stomach and/or gastric-esophageal junction (GEJ), or endometrial cancer is non-microsatellite instability-high (non-MSI-H) or proficient mismatch repair (pMMR). In one embodiment, the cancer is gastric cancer, adenocarcinoma of the stomach and/or gastric-esophageal junction. In one embodiment, the cancer is renal cell carcinoma. In one embodiment, the colorectal cancer is unresectable or metastatic (Stage IV).


In another embodiment, cancers that may be treated by the methods, medicaments or uses of the invention include hematological malignancies, but are not limited to: classical Hodgkin lymphoma (cHL), diffuse large B-cell lymphoma (DLBCL), transformed DLBCL, gray zone lymphoma, double hit lymphoma, Primary mediastinal B cell lymphoma (PMBCL) or indolent non-Hodgkin lymphoma (iNHL) (for example, follicular lymphoma, marginal zone lymphoma, mucosa-associated lymphoid tissue lymphoma, or small lymphocytic lymphoma).


In a further embodiment, cancers that may be treated by the methods, medicaments or uses of the invention include cancers selected from the group consisting of: renal cell carcinoma, urothelial carcinoma of the renal pelvis, ureter, bladder or urethra, gastric. GEJ adenocarcinoma, non-small cell lung cancer and bladder cancer. In a further embodiment, cancers that may be treated are selected from the group consisting of: renal cell carcinoma, gastric, GEJ adenocarcinoma, non-small cell lung cancer, head and neck squamous cell cancer, fallopian tube cancer, endometrial cancer, and colorectal cancer. In one embodiment, the cancer is colorectal cancer. In another embodiment, the cancer is microsatellite instability-high (MSI-H) colorectal cancer. In one embodiment, the colorectal cancer is non-microsatellite instability-high (non-MSI-H) or proficient mismatch repair (pMMR). In one embodiment, the cancer is renal cell carcinoma. In one embodiment, the cancer is clear cell renal cell carcinoma. In one embodiment, the forgoing cancers are advanced, unresectable or metastatic. In one embodiment, ancer is Stage IV. In another embodiment, the cancer is Stage III.


In one aspect of the foregoing embodiments, the patient with cancer progressed after anti-PD-1 or anti-PD-L1 treatment. In one embodiment, the patient with cancer progressed after combination therapy of anti-PD-1 or anti-PD-L1 and anti-LAG3 treatment. In one embodiment, the patient with cancer has not received prior anti-PD-1 or anti-PD-L1 treatment. In another embodiment, the patient progressed with previous treatment with a VEGF receptor tyrosine kinase inhibitor. In another embodiment, the patient progressed with previous treatment of PD-L1 or PD-1 checkpoint inhibitor treatment in combination or in sequence with a VEGF receptor tyrosine kinase inhibitor (VEGFR/TKI). Examples of VEGFR/TKIs include but are not limited to Axitinib and Cabozantinib. In one embodiment, the combination therapy is for first line treatment. In another embodiment, the combination therapy is for second or third line treatment.


The methods, medicaments and uses of the invention may also comprise one or more additional therapeutic agents. The additional therapeutic agent may be, e.g., a chemotherapeutic, a biotherapeutic agent, an immunogenic agent (for example, attenuated cancerous cells, tumor antigens, antigen presenting cells such as dendritic cells pulsed with tumor derived antigen or nucleic acids, immune stimulating cytokines (for example, IL-2, IFNα2, GM-CSF), and cells transfected with genes encoding immune stimulating cytokines such as but not limited to GM-CSF). The specific dosage and dosage schedule of the additional therapeutic agent can further vary, and the optimal dose, dosing schedule and route of administration will be determined based upon the specific therapeutic agent that is being used.


Each therapeutic agent in the methods, medicaments and uses of the invention may be administered either alone or in a medicament (also referred to herein as a pharmaceutical composition) that comprises the therapeutic agent and one or more pharmaceutically acceptable carriers, excipients and diluents, according to standard pharmaceutical practice.


Each therapeutic agent in the methods, medicaments and uses of the invention may be administered simultaneously (i.e., in the same medicament), concurrently (i.e., in separate medicaments administered one right after the other in any order) or sequentially in any order. Sequential administration is particularly useful when the therapeutic agents in the combination therapy are in different dosage forms (one agent is a tablet or capsule and another agent is a sterile liquid) and/or are administered on different dosing schedules, e.g., a chemotherapeutic that is administered at least daily and a biotherapeutic that is administered less frequently, such as once weekly, once every two weeks, or once every three weeks.


In some embodiments, the LAG3 antagonist is administered before administration of the PD-1 antagonist, while in other embodiments, the LAG3 antagonist is administered after administration of the PD-1 antagonist. In another embodiment, the LAG3 antagonist is administered concurrently with the PD-1 antagonist.


In some embodiments, at least one of the therapeutic agents in the methods, medicaments and uses of the invention is administered using the same dosage regimen (dose, frequency and duration of treatment) that is typically employed when the agent is used as monotherapy for treating the same cancer. In other embodiments, the patient receives a lower total amount of at least one of the therapeutic agents in the methods, medicaments and uses than when the agent is used as monotherapy, e.g., smaller doses, less frequent doses, and/or shorter treatment duration.


Each small molecule therapeutic agent in the methods, medicaments and uses of the invention can be administered orally or parenterally, including the intravenous, intramuscular, intraperitoneal, subcutaneous, rectal, topical, and transdermal routes of administration.


The methods, medicaments and uses of the invention may be used prior to or following surgery to remove a tumor and may be used prior to, during or after radiation therapy.


In some embodiments, a combination therapy of the invention is administered to a patient who has not been previously treated with a biotherapeutic or chemotherapeutic agent, i.e., is treatment-naïve. In other embodiments, the combination therapy is administered to a patient who failed to achieve a sustained response after prior therapy with a biotherapeutic or chemotherapeutic agent, i.e., is treatment-experienced.


A combination therapy of the invention is typically used to treat a tumor that is large enough to be found by palpation or by imaging techniques well known in the art, such as MRI, ultrasound, or CAT scan.


A combination therapy of the invention can be administered to a human patient who has a cancer that tests positive for one or both of PD-L1 and PD-L2, and preferably tests positive for PD-L1 expression. In some preferred embodiments. PD-L1 expression is detected using a diagnostic anti-human PD-L1 antibody, or antigen binding fragment thereof, in an IHC assay on an FFPE or frozen tissue section of a tumor sample removed from the patient. Typically, the patient's physician would order a diagnostic test to determine PD-L1 expression in a tumor tissue sample removed from the patient prior to initiation of treatment with the PD-1 antagonist, the LAG3 antagonist and/or lenvatinib, but it is envisioned that the physician could order the first or subsequent diagnostic tests at any time after initiation of treatment, such as for example after completion of a treatment cycle. In one embodiment, the PD-L1 expression is measured by the PD-L1 IHC 22C3 pharmDx assay. In another embodiment, the patient has a Mononuclear Inflammatory Density Score for PD-L1 expression ≥2. In another embodiment, the patient has a Mononuclear Inflammatory Density Score for PD-L1 expression ≥3. In another embodiment, the patient has a Mononuclear Inflammatory Density Score for PD-L1 expression 24. In another embodiment, Tumor Proportion Score for PD-L1 expression is used for selection of non-small cell lung cancer patients. In another embodiment, the patient has a Tumor Proportion Score for PD-L1 expression ≥1%. In another embodiment, the patient has a Tumor Proportion Score for PD-L1 expression ≥10%. In another embodiment, the patient has a Tumor Proportion Score for PD-L1 expression ≥20%. In another embodiment, the patient has a Tumor Proportion Score for PD-L1 expression ≥30%. In another embodiment, the patient has a Tumor Proportion Score for PD-L1 expression ≥50%. In a further embodiment, the patient has a Combined Positive Score for PD-L1 expression ≥1%. In a further embodiment, the patient has a Combined Positive Score for PD-L1 expression between 1 and 20%. In a further embodiment, the patient has a Combined Positive Score for PD-L1 expression ≥2%. In a further embodiment, the patient has a Combined Positive Score for PD-L1 expression ≥5%. In yet a further embodiment, the patient has a Combined Positive Score for PD-L1 expression 10%. In a further embodiment, the patient has a Combined Positive Score for PD-L1 expression ≥15%. In yet a further embodiment, the patient has a Combined Positive Score for PD-L1 expression ≥20%.


Selecting a dosage regimen (also referred to herein as an administration regimen) for a combination therapy of the invention depends on several factors, including the serum or tissue turnover rate of the entity, the level of symptoms, the immunogenicity of the entity, and the accessibility of the target cells, tissue or organ in the individual being treated. Preferably, a dosage regimen maximizes the amount of each therapeutic agent delivered to the patient consistent with an acceptable level of side effects. Accordingly, the dose amount and dosing frequency of each biotherapeutic and chemotherapeutic agent in the combination depends in part on the particular therapeutic agent, the severity of the cancer being treated, and patient characteristics. Guidance in selecting appropriate doses of antibodies, cytokines, and small molecules are available. See, e.g., Wawrzynczak (1996) Antibody Therapy, Bios Scientific Pub. Ltd, Oxfordshire, UK; Kresina (ed.) (1991) Monoclonal Antibodies. Cytokines and Arthritis, Marcel Dekker, New York, NY; Bach (ed.) (1993) Monoclonal Antibodies and Peptide Therapy in Autoimmune Diseases, Marcel Dekker, New York, NY; Baert et al. (2003) New Engl. J. Med. 348:601-608; Milgrom et al. (1999) New Engl. J. Med 341:1966-1973; Slamon et al. (2001) New Engl. J. Med. 344:783-792; Beniaminovitz et al. (2000)New Engl. J. Med. 342:613-619; Ghosh el al. (2003) New Engl. J. Med 348:24-32; Lipsky et al. (200(0) New Engl. J. Med. 343:1594-1602; Physicians' Desk Reference 2003 (Physicians' Desk Reference, 57th Ed); Medical Economics Company; ISBN: 1563634457; 57th edition (November 2002). Determination of the appropriate dosage regimen may be made by the clinician. e.g., using parameters or factors known or suspected in the art to affect treatment or predicted to affect treatment, and will depend, for example, the patient's clinical history (e.g., previous therapy), the type and stage of the cancer to be treated and biomarkers of response to one or more of the therapeutic agents in the combination therapy.


Biotherapeutic agents in a combination therapy of the invention may be administered by continuous infusion, or by doses at intervals of, e.g., daily, every other day, three times per week, or one time each week, two weeks, three weeks, monthly, bimonthly, etc. A total weekly dose is generally at least 0.05 μg/kg, 0.2 μg/kg, 0.5 μg/kg, 1 μg/kg, 10 μg/kg, 100 μg/kg, 0.2 mg/kg, 1.0 mg/kg, 2.0 mg/kg, 10 mg/kg, 25 mg/kg, 50 mg/kg body weight or more. See. e.g., Yang et al. (2003) New Engl. J Med. 349:427-434; Herold et al. (2002) New Engl. J Med. 346:1692-1698; Liu et al. (1999) J Neurol. Neurosurg. Psych. 67:451-456; Portielji et al. (20003) Cancer Immunol. Immunother. 52:133-144.


In some embodiments that employ an anti-human PD-1 mAb as the PD-1 antagonist in the methods, medicaments and uses of the invention, the dosing regimen will comprise administering the anti-human PD-1 mAb at a dose of 1, 2, 3, 5 or 10 mg/kg at intervals of about 14 days (±2 days) or about 21 days (±2 days) or about 30 days (±2 days) throughout the course of treatment.


In other embodiments that employ an anti-human PD-1 mAb as the PD-1 antagonist in the methods, medicaments and uses of the invention, the dosing regimen will comprise administering the anti-human PD-1 mAb at a dose of from about 0.005 mg/kg to about 10 mg/kg, with intra-patient dose escalation. In other escalating dose embodiments, the interval between doses will be progressively shortened, e.g., about 30 days (±2 days) between the first and second dose, about 14 days (±2 days) between the second and third doses. In certain embodiments, the dosing interval will be about 14 days (±2 days), for doses subsequent to the second dose.


In certain embodiments, a subject will be administered an intravenous (IV) infusion or subcutaneous injection of a medicament comprising any of the PD-1 antagonists described herein.


In one preferred embodiment of the invention, the PD-1 antagonist in the combination therapy is nivolumab, which is administered intravenously at a dose selected from the group consisting of: 1 mg/kg Q2W, 2 mg/kg Q2W, 3 mg/kg Q2W, 5 mg/kg Q2W, 10 mg Q2W, 1 mg/kg Q3W, 2 mg/kg Q3W, 3 mg/kg Q3W, 5 mg/kg Q3W, and 10 mg/kg Q3W.


In another preferred embodiment of the invention, the PD-1 antagonist in the combination therapy is pembrolizumab, or a pembrolizumab variant, that is administered in a liquid medicament at a dose selected from the group consisting of 1 mg/kg Q2W, 2 mg/kg Q2W, 3 mg/kg Q2W, 5 mg/kg Q2W, 10 mg/kg Q2W, 1 mg/kg Q3W, 2 mg/kg Q3W, 3 mg/kg Q3W, 5 mg/kg Q3W, 10 mg/kg Q3W and flat-dose equivalents of any of these doses, i.e., such as 200 mg Q3W or 400 mg Q6W. In some embodiments, pembrolizumab is provided as a liquid medicament that comprises 25 mg/ml pembrolizumab, 7% (w/v) sucrose, 0.02% (w/v) polysorbate 80 in 10 mM histidine buffer pH 5.5. In other embodiments, pembrolizumab is provided as a liquid medicament that comprises about 125 to about 200 mg/mL of pembrolizumab, or an antigen binding fragment thereof; about 10 mM histidine buffer; about 10 mM L-methionine, or a pharmaceutically acceptable salt thereof; about 7% (w/v) sucrose; and about 0.02% (w/v) polysorbate 80.


In some embodiments, the selected dose of pembrolizumab is administered by IV infusion. In one embodiment, the selected dose of pembrolizumab is administered by IV infusion over a time period of between 25 and 40 minutes, or about 30 minutes. In other embodiments, the selected dose of pembrolizumab is administered by subcutaneous injection.


In some embodiments, the patient is treated with the combination therapy for at least 24 weeks, e.g., eight 3-week cycles. In some embodiments, treatment with the combination therapy continues until the patient exhibits evidence of PD or a CR.


In the foregoing methods, medicaments and uses, in another embodiment, the anti-PD-1 or anti-PD-L1 antibody and anti-LAG3 antibody are co-formulated. In one embodiment, the invention provides a method for treating cancer in a patient comprising administering via intravenous infusion to the individual a composition comprising 200 mg of pembrolizumab or pembrolizumab variant and 800 mg of anti-LAG3 antibody Ab6 or Ab6 variant on Day 1 every three weeks, and orally administering 8 mg of lenvatinib or a pharmaceutically acceptable salt thereof daily. In one embodiment, the invention provides a method for treating cancer in a patient comprising administering via intravenous infusion to the individual a composition comprising 200 mg of pembrolizumab or pembrolizumab variant and 800 mg of anti-LAG3 antibody Ab6 or Ab6 variant on Day 1 every three weeks, and orally administering 10 mg of lenvatinib or a pharmaceutically acceptable salt thereof daily. In another embodiment, the invention provides a method for treating cancer in a patient comprising administering via intravenous infusion to the individual a composition comprising 200 mg of pembrolizumab or pembrolizumab variant and 800 mg of anti-LAAG3 antibody Ab6 or Ab6 variant on Day 1 every three weeks, and orally administering 12 mg of lenvatinib or a pharmaceutically acceptable salt thereof daily. In another embodiment, the invention provides a method for treating cancer in a patient comprising administering via intravenous infusion to the individual a composition comprising 200 mg of pembrolizumab or pembrolizumab variant and 800 mg of anti-LAG3 antibody Ab6 or Ab6 variant on Day 1 every three weeks, and orally administering 14 mg of lenvatinib or a pharmaceutically acceptable salt thereof daily. In another embodiment, the invention provides a method for treating cancer in a patient comprising administering via intravenous infusion to the individual a composition comprising 200 mg of pembrolizumab or pembrolizumab variant and 800 mg of anti-LAG3 antibody Ab6 or Ab6 variant on Day 1 every three weeks, and orally administering 20 mg of lenvatinib or a pharmaceutically acceptable salt thereof daily.


In the foregoing methods, medicaments and uses, in another embodiment, the anti-PD-1 or anti-PD-L1 antibody and anti-LAG3 antibody are co-administered. In one embodiment, 200 mg pembrolizumab or pembrolizumab variant and 800 mg Ab6 or Ab6 variant are co-administered on Day 1 every three weeks for intravenous infusion, and 8 mg of lenvatinib or a pharmaceutically acceptable salt thereof is orally administered daily. In one embodiment, 200 mg pembrolizumab or pembrolizumab variant and 800 mg Ab6 or Ab6 variant are co-administered on Day 1 every three weeks for intravenous infusion, and 10 mg of lenvatinib or a pharmaceutically acceptable salt thereof is orally administered daily. In one embodiment, 200 mg pembrolizumab or pembrolizumab variant and 800 mg Ab6 or Ab6 variant are co-administered on Day 1 every three weeks for intravenous infusion, and 12 mg of lenvatinib or a pharmaceutically acceptable salt thereof is orally administered daily. In one embodiment, 200 mg pembrolizumab or pembrolizumab variant and 800 mg Ab6 or Ab6 variant are co-administered on Day 1 every three weeks for intravenous infusion, and 14 mg of lenvatinib or a pharmaceutically acceptable salt thereof is orally administered daily. In one embodiment, 200 mg pembrolizumab or pembrolizumab variant and 800 mg Ab6 or Ab6 variant are co-administered on Day 1 every three weeks for intravenous infusion, and 20 mg of lenvatinib or a pharmaceutically acceptable salt thereof is orally administered daily.


In the foregoing methods, medicaments and uses, in one embodiment, 400 mg pembrolizumab or pembrolizumab variant is administered on Day 1 every six weeks and 800 mg Ab6 or Ab6 variant is administered on Day 1 every three weeks for intravenous infusion, and 8 mg of lenvatinib or a pharmaceutically acceptable salt thereof is orally administered daily. In one embodiment, 400 mg pembrolizumab or pembrolizumab variant is administered on Day 1 every six weeks and 800 mg Ab6 or Ab6 variant is administered on Day 1 every three weeks for intravenous infusion, and 10 mg of lenvatinib or a pharmaceutically acceptable salt thereof is orally administered daily. In another embodiment, 400 mg pembrolizumab or pembrolizumab variant is administered on Day 1 every six weeks and 800 mg Ab6 or Ab6 variant is administered on Day 1 every three weeks for intravenous infusion, and 12 mg of lenvatinib or a pharmaceutically acceptable salt thereof is orally administered daily. In one embodiment, 400 mg pembrolizumab or pembrolizumab variant is administered on Day 1 every six weeks and 800 mg Ab6 or Ab6 variant is administered on Day 1 every three weeks for intravenous infusion, and 14 mg of lenvatinib or a pharmaceutically acceptable salt thereof is orally administered daily. In one embodiment, 400 mg pembrolizumab or pembrolizumab variant is administered on Day 1 every six weeks and 800 mg Ab6 or Ab6 variant is administered on Day 1 every three weeks for intravenous infusion, and 20 mg of lenvatinib or a pharmaceutically acceptable salt thereof is orally administered daily.


In the foregoing methods, medicaments and uses, in one embodiment, lenvatinib or a pharmaceutically acceptable salt thereof is administered at a daily dose of 8, 10, 12, 14, 18, 20, or 24 mg.


Pharmaceutically acceptable excipients of the present disclosure include for instance, solvents, bulking agents, buffering agents, tonicity adjusting agents, and preservatives (see, e.g., Pramanick et al., Pharma Times, 45:65-77, 2013). In some embodiments the pharmaceutical compositions may comprise an excipient that functions as one or more of a solvent, a bulking agent, a buffering agent, and a tonicity adjusting agent (e.g., sodium chloride in saline may serve as both an aqueous vehicle and a tonicity adjusting agent).


In some embodiments, the pharmaceutical compositions comprise an aqueous vehicle as a solvent. Suitable vehicles include for instance sterile water, saline solution, phosphate buffered saline, and Ringer's solution. In some embodiments, the composition is isotonic.


The pharmaceutical compositions may comprise a bulking agent. Bulking agents are particularly useful when the pharmaceutical composition is to be lyophilized before administration. In some embodiments, the bulking agent is a protectant that aids in the stabilization and prevention of degradation of the active agents during freeze or spray drying and/or during storage. Suitable bulking agents are sugars (mono-, di- and polysaccharides) such as sucrose, lactose, trehalose, mannitol, sorbital, glucose and raffinose.


The pharmaceutical compositions may comprise a buffering agent. Buffering agents control pH to inhibit degradation of the active agent during processing, storage and optionally reconstitution. Suitable buffers include for instance salts comprising acetate, citrate, phosphate or sulfate. Other suitable buffers include for instance amino acids such as arginine, glycine, histidine, and lysine. The buffering agent may further comprise hydrochloric acid or sodium hydroxide. In some embodiments, the buffering agent maintains the pH of the composition within a range of 4 to 9. In some embodiments, the pH is greater than (lower limit) 4, 5, 6, 7 or 8. In some embodiments, the pH is less than (upper limit) 9, 8, 7, 6 or 5. That is, the pH is in the range of from about 4 to 9 in which the lower limit is less than the upper limit.


The pharmaceutical compositions may comprise a tonicity adjusting agent. Suitable tonicity adjusting agents include for instance dextrose, glycerol, sodium chloride, glycerin and mannitol.


The pharmaceutical compositions may comprise a preservative. Suitable preservatives include for instance antioxidants and antimicrobial agents. However, in preferred embodiments, the pharmaceutical composition is prepared under sterile conditions and is in a single use container, and thus does not necessitate inclusion of a preservative.


In some embodiments, a medicament comprising an anti-PD-1 antibody as the PD-1 antagonist may be provided as a liquid formulation or prepared by reconstituting a lyophilized powder with sterile water for injection prior to use. PCT International application publ. no. WO 2012/135408 describes the preparation of liquid and lyophilized medicaments comprising pembrolizumab that are suitable for use in the present invention. In some embodiments, a medicament comprising pembrolizumab is provided in a glass vial that contains about 100 mg of pembrolizumab in 4 ml of solution. Each 1 mL of solution contains 25 mg of pembrolizumab and is formulated in: L-histidine (1.55 mg), polysorbate 80 (0.2 mg), sucrose (70 mg), and Water for Injection, USP. The solution requires dilution for IV infusion.


In some embodiments, a medicament comprising an anti-LAG3 antibody as the LAG3 antagonist may be provided as a liquid formulation or prepared by reconstituting a lyophilized powder with sterile water for injection prior to use. In one embodiment, the liquid formulation comprises about 25 mg/mL anti-LAG3 antibody; about 50 mg/mL sucrose; about 0.2 mg/mL polysorbate 80; about 10 mM L-histidine buffer at about pH 5.8-6.0; about 70 mM L-Arginine-HCl thereof, and optionally about 10 mM L-methionine.


In other aspects, the medicament is a co-formulation of an anti-LAG3 antibody or antigen binding fragment and an anti-PD-1 antibody or antigen binding fragment with 20 mg/mL of Ab6 or Ab6 variant, 5 mg/mL or pembrolizumab or pembrolizumab variant, 56 mM L-Arginine HCl, 5.4% sucrose, 8.0 mM methionine, 0.02% PS-80, and 10 mM Histidine buffer.


The medicaments described herein may be provided as a kit that comprises a first container, a second container and a package insert or label. The medicaments described herein may also be provided as a kit which comprises a first container, a second container, and a package insert or label. The first container contains at least one dose of a medicament comprising a PD-1 antagonist and at least one dose of a medicament comprising a LAG3 antagonist, the second container contains at least one dose of a medicament comprising lenvatinib, and the package insert or label, that comprises instructions for treating a patient for cancer using the medicaments. The first and second containers may be comprised of the same or different shapes (e.g., vials, syringes and bottles) and/or material (e.g., plastic or glass). The kit may further comprise other materials that may be useful in administering the medicaments, such as diluents, filters, IV bags and lines, needles and syringes. In some preferred embodiments of the kit, the PD-1 antagonist is an anti-PD-1 antibody and the instructions state that the medicaments are intended for use in treating a patient having cancer that tests positive for PD-L1 expression by an IHC assay.


In yet still another embodiment of the various methods, kits, or uses provided herein, the lenvatinib or a pharmaceutically acceptable salt thereof is lenvatinib mesylate. Suitable pharmaceutically acceptable excipients are disclosed in EP2468281 and the prescribing information for LENVIMA®. Capsules for oral administration contain 4 mg or 10 mg of lenvatinib, equivalent to 4.90 mg or 12.25 mg of lenvatinib mesylate, respectively. In another embodiment, when a pharmaceutically acceptable salt of lenvatinib is administered, such as lenvatinib mesylate, and the dose of lenvatinib to be used is 4 mg, a medical practitioner would know to administer 4.90 mg of lenvatinib mesylate. In another embodiment, when a pharmaceutically acceptable salt of lenvatinib is administered, such as lenvatinib mesylate, and the dose of lenvatinib to be used is 10 mg, a medical practitioner would know to administer 12.25 mg of lenvatinib mesylate.


General Methods

Standard methods in molecular biology are described Sambrook, Fritsch and Maniatis (1982 & 1989 2nd Edition, 2001 3rd Edition) Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY; Sambrook and Russell (2001) Molecular Cloning, 3rd ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY; Wu (1993) Recombinant DNA, Vol. 217, Academic Press, San Diego, CA). Standard methods also appear in Ausbel, et al. (2001) Current Protocols in Molecular Biology. Vols. 1-4, John Wiley and Sons, Inc. New York, NY, which describes cloning in bacterial cells and DNA mutagenesis (Vol. 1), cloning in mammalian cells and yeast (Vol. 2), glycoconjugates and protein expression (Vol. 3), and bioinformatics (Vol. 4).


Methods for protein purification including immunoprecipitation, chromatography, electrophoresis, centrifugation, and crystallization are described (Coligan, et al. (2000) Current Protocols in Protein Science. Vol. 1, John Wiley and Sons, Inc., New York). Chemical analysis, chemical modification, post-translational modification, production of fusion proteins, glycosylation of proteins are described (see, e.g., Coligan, et al. (2000) Current Protocols in Protein Science, Vol. 2, John Wiley and Sons, Inc., New York; Ausubel, et al. (2001) Current Protocols in Molecular Biology. Vol. 3, John Wiley and Sons, Inc., NY, NY, pp. 16.0.5-16.22.17; Sigma-Aldrich, Co. (2001) Products for Life Science Research, St. Louis, MO; pp. 45-89; Amersham Pharmacia Biotech (2001) BioDirectory, Piscataway, N.J., pp. 384-391). Production, purification, and fragmentation of polyclonal and monoclonal antibodies are described (Coligan, et al. (2001) Current Protcols in Immunology. Vol. 1, John Wiley and Sons, Inc., New York; Harlow and Lane (1999) Using Antibodies. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY; Harlow and Lane, supra). Standard techniques for characterizing ligand/receptor interactions are available (see. e.g., Coligan, et al. (2001) Current Protocols in Immunology, Vol. 4, John Wiley, Inc., New York).


Monoclonal, polyclonal, and humanized antibodies can be prepared (see, e.g., Sheperd and Dean (eds.) (2000) Monoclonal Antibodies, Oxford Univ. Press, New York, NY; Kontermann and Dubel (eds.) (2001) Antibody Engineering, Springer-Verlag, New York; Harlow and Lane (1988) Antibodies A Laboratory Manual, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp. 139-243; Carpenter, et al. (2000) J. Immunol. 165:6205; He, et al. (1998) J. Immunol. 160:1029; Tang et al. (1999) J. Biol. Chem. 274:27371-27378; Baca et al. (1997) J. Biol. Chem. 272:10678-10684; Chothia et al. (1989) Nature 342:877-883; Foote and Winter (1992) J. Mol. Biol. 224:487-499; U.S. Pat. No. 6,329,511).


An alternative to humanization is to use human antibody libraries displayed on phage or human antibody libraries in transgenic mice (Vaughan et al. (1996) Nature Biotechnol. 14:309-314; Barbas (1995) Nature Medicine 1:837-839; Mendez et al. (1997) Nature Genetics 15:146-156; Hoogenboom and Chames (2000) Immunol. Today 21:371-377; Barbas et al. (2001) Phage Display: A Laboratory Manual, Cold Spring Harbor Laboratory Press, Cold Spring Harbor. New York; Kay et al. (1996) Phage Display of Peptides and Proteins: A Laboratory Manual, Academic Press, San Diego, CA; de Bruin et al. (1999) Nature Biotechnol 17:397-399).


Purification of antigen is not necessary for the generation of antibodies. Animals can be immunized with cells bearing the antigen of interest. Splenocytes can then be isolated from the immunized animals, and the splenocytes can fuse with a myeloma cell line to produce a hybridoma (see, e.g., Meyaard et al. (1997) Immunity 7:283-290; Wright et al. (2000) Immunity 13:233-242; Preston et al., supra; Kaithamana et al. (1999) J. Immunol. 163:5157-5164).


Antibodies can be conjugated, e.g., to small drug molecules, enzymes, liposomes, polyethylene glycol (PEG). Antibodies are useful for therapeutic, diagnostic, kit or other purposes, and include antibodies coupled, e.g., to dyes, radioisotopes, enzymes, or metals. e.g., colloidal gold (see, e.g., Le Doussal et al. (1991) J Immunol. 146:169-175; Gibellini et al. (1998) J. Immunol. 160:3891-3898; Hsing and Bishop (1999) J. Immunol. 162:2804-2811; Everts et al. (2002) J. Immunol. 168:883-889).


Methods for flow cytometry, including fluorescence activated cell sorting (FACS), are available (see, e.g., Owens, et al. (1994) Flow Cytometry Principles for Clinical Laboratory Practice, John Wiley and Sons, Hoboken. NJ; Givan (2001) Flow Cytometry, 2nd ed.; Wiley-Liss, Hoboken, NJ; Shapiro (2003) Practical Flow Cytometry, John Wiley and Sons, Hoboken, NJ). Fluorescent reagents suitable for modifying nucleic acids, including nucleic acid primers and probes, polypeptides, and antibodies, for use, e.g., as diagnostic reagents, are available (Molecular Probesy (2003) Catalogue, Molecular Probes, Inc., Eugene, OR; Sigma-Aldrich (2003) Catalogue, St. Louis, MO).


Standard methods of histology of the immune system are described (see, e.g., Muller-Harmelink (ed.) (1986) Human Thymus: Histopathology and Pathology, Springer Verlag, New York, NY; Hiatt, et al. (2000) Color Atlas of Histology, Lippincott. Williams, and Wilkins, Phila. PA; Louis, et al. (2002) Basic Histology: Text and Atlas, McGraw-Hill, New York, NY).


Software packages and databases for determining, e.g., antigenic fragments, leader sequences, protein folding, functional domains, glycosylation sites, and sequence alignments, are available (see, e.g., GenBank. Vector NTI® Suite (Informax, Inc, Bethesda, MD); GCG Wisconsin Package (Accelrys, Inc., San Diego, CA); DeCypher® (TimeLogic Corp., Crystal Bay, Nevada); Menne, et al. (2000) Bioinformatics 16: 741-742; Menne, et al. (2000) Bioinformatics Applications Note 16:741-742; Wren, et al. (2002) Comput. Methods Programs Biomed. 68:177-181; von Heijne (1983) Eur. J. Biochem. 133:17-21; von Heijne (1986) Nucleic Acids Res. 14:4683-4690).


EXAMPLES
Example 1: Clinical Studies of Pembrolizumab, Anti-LAG3 Antibody Ab6 and Lenvatinib in Colorectal Cancer

Subjects with non-MSI-H or proficient mismatch repair (pMMR) colorectal cancer naïve to prior PD-1/PD-L1 therapy that have progressed on two (2) prior lines of therapy are enrolled. The antitumor efficacy of Ab6 administered in combination with pembrolizumab and lenvatinib is tested. A TPI design is used to assess the safety and tolerability of this triplet combination in the first 14 subjects treated. If a de-escalation is called for by TPI, the dose of lenvatinib is reduced; the doses of Ab6 and pembrolizumab is fixed.


Subjects are selected according to CRC originating in either the colon or rectum that is locally advanced unresectable or metastatic (ie, Stage IV) and has been treated with 2 prior lines of therapy but has not been treated with prior anti-PD-1/PD-L1 therapy. Study medication will treat Third line (3L) CRC. Subjects must have received oxaliplatin and irinotecan in separate lines of therapy, these are usually provided with fluoropyrimidine (eg, FOLFOX and FOLFIRI). Capecitabine is acceptable as equivalent to fluoropyrimidine in prior therapy (XOLFOX, XOLFIRI). Subjects who have previously received fluoropyrimidine, oxaliplatin, and irinotecan as part of the same and only chemotherapy regimen, eg, FOLFOXIRI or FOLFIRINOX, are to be considered Second line (2L) patients, and do not qualify for the study. Adjuvant chemotherapy counts as a first line of prior systemic therapy if there is documented disease progression within 6 months of chemotherapy completion. All systemic cytotoxic chemotherapy, including antibody-drug conjugates with a cytotoxic warhead, are considered prior lines of therapy. Definitive surgery with curative intent and radiation therapy or systemically administered radiopharmaceutical therapy are not considered prior lines of therapy. If a treatment regimen is discontinued for any reason and a different regimen is started, it should be considered a new line of therapy. Switching (eg, cisplatin to carboplatin) will not be considered a line of therapy change (unless a delay in treatment is required for ≥2 months). Switching for toxicity is considered a line of therapy change if there is a change in mechanism of action between the therapies. Interruptions will not be considered a line of therapy change (unless the interruption is ≥2 months). Maintenance regimens administered with the purpose of maintaining response following treatment will not be considered lines of therapy. Hyperthermic intraperitoneal chemotherapy (HIPEC) or other locoregional therapies are allowed, but will not be counted as prior lines of therapies.









TABLE 4





Dosing regimen




















Ab6
800
mg
Q3W
IV infusion
Day 1 of







each 21-day







cycle


Pembrolizumab
200
mg
Q3W
IV Infusion
Day 1 of







each 21-day







cycle


Lenvatinib
20
mg
QD
Oral
QD of each



14
mg


21-day cycle



10
mg



8
mg









Pembrolizumab is administered first and then, following a 30-minute interval, Ab6 is administered. Lenvatinib is taken orally at approximately the same time each day in 21-day cycles. However, on visit days when pembrolizumab and Ab6 are also administered, lenvatinib is administered 0 to 4 hours after the Ab6 infusion is complete.


Example 2 Phase I Study of Ab6A and Lenvatinib in Advanced Clear Cell Renal Cell Carcinoma

The Phase 1b/2 study evaluates the safety and efficacy of a reference arm (pembrolizumab plus lenvatinib) and Ab6A (a co-formulated product of 800 mg Ab6 and 200 mg pembrolizumab), and lenvatinib for the treatment of advanced RCC. Preliminary efficacy is evaluated using ORR per RECIST 1.1, by BICR. The study includes male and female participants who are at least 18 years of age with advanced or metastatic RCC with clear cell component (ccRCC).

    • I. Type of Participant and Disease Characteristics
    • 1. Has a histologically confirmed diagnosis of locally advanced/metastatic ccRCC (with or without sarcomatoid features), ie, Stage IV RCC per AJCC.
    • 2. Has received no prior systemic therapy for advanced RCC. [1L participants]. Prior neoadjuvant/adjuvant therapy for RCC is acceptable if completed ≥12 months before randomization/allocation.
    • 3. Has measurable disease per RECIST 1.1 as assessed by BICR. Lesions situated in a previously irradiated area are considered measurable if progression has been shown in such lesions.
    • II. Type of Participant and Disease Characteristics
    • 1. Has a histologically confirmed diagnosis of locally advanced/metastatic ccRCC (with or without sarcomatoid features), ie, Stage IV RCC per AJCC.
    • 2. Has experienced disease progression on or after having received systemic treatment for locally advanced or metastatic RCC with a PD-(L)1 checkpoint inhibitor (in sequence or in combination with a VEGF receptor tyrosine kinase inhibitor (VEGFR-TKI).


In this study, PD-(L)1 checkpoint inhibitor treatment progression is defined by meeting all of the following criteria: has received at least 2 doses of an anti-PD-(L)1 mAb; has demonstrated radiographic disease progression during or after an anti-PD-(L)1 mAb as defined by RECIST 1.1; disease progression has been documented within 12 weeks from the last dose of an anti-PD-(L)1 mAb;

    • 3. Has experienced disease progression on or after having received systemic treatment for locally advanced or metastatic RCC with a VEGFR-TKI (in sequence or in combination with a PD-[L]1 checkpoint inhibitor).


VEGFR-TKI treatment progression is defined by meeting the following criterion: has demonstrated radiographic disease progression during or after a treatment with a VEGFR-TKI as defined by RECIST 1.1 by investigator; has measurable disease per RECIST 1.1 as assessed by BICR Lesions situated in a previously irradiated area are considered measurable if progression has been demonstrated in such lesions.









TABLE 5







Medication Dose Levels










Arm A2
Dose Level 0
Dose Level -1
Dose Level -2





Ab6A
800 mg of Ab6
800 mg of Ab6
800 mg of Ab6



and 200 mg of
and 200 mg of
and 200 mg of



pembrolizumab
pembrolizumab
pembrolizumab


Lenvatinib
20 mg
14 mg
10 mg










Ab6A is administered as an IV infusion over 30 mins on Day 1 every three weeks. Lenvatinib is administered on Day 1 daily 30 minutes after infusion is complete.


Example 3: Mouse Syngeneic Tumor Model to Investigate Anti-Tumor Benefit of Lenvatinib and Anti-PD-1 and Anti-LAG3 Dual Checkpoint Blockade

Preclinical mouse data using syngeneic tumor models to demonstrate the anti-tumor benefit from combining VEGF tyrosine kinase inhibitor lenvatinib together with anti-PD-1 and anti-LAG3 dual checkpoint blockade is provided. Two tumor models were evaluated to represent a tumor type which is partially sensitive to anti-PD-1 therapy (CT26 model) and one which is intrinsically resistant to anti-PD-1 (KPC-2838c3 model). The treatment using a combination of anti-PD-1, anti-LAG3 and lenvatinib are advantageous over treatment with each agent when administered alone as monotherapies.


Prior to treatment initiation, female BALB/c mice (for CT26 study) or C57BL/6J mice (for KPC-2838c3 study) aged 8 weeks weighing between 18 to 21 grams were anesthetized and subcutaneously injected into the rear flank with 0.3×106 CT26 or 0.5×106 KPC-2838c3 log-phase sub-confluent cells. When the mean tumor volume of inoculated animals reached approximately 100 mm3 (II days later for CT26, 15 days later for KPC-2838c3) mice were pair-matched into 8 treatment groups consisting of 10 mice per group. Treatment groups consisted of: 1) 0.5% methylcellulose (Vehicle)+Isotype mouse IgG1 antibody (migG1); 2) Vehicle+anti-PD-1 mIgG1 antibody (muDX400); 3) Vehicle+anti-LAG3 mIgG1 antibody (28G10); 4) Lenvatinib+isotype; 5) Vehicle+anti-PD-1+anti-LAG3; 6) Lenvatinib+anti-PD-1; 7) Lenvatinib+anti-LAG3; 8) Lenvatinib+anti-PD-1+anti-LAG3. Vehicle and lenvatinib were orally gavage-dosed once daily (QD) at 10 mg/kg body weight. Isotype control, a mouse monoclonal antibody specific for adenoviral hexon of the isotype IgG1, as well as anti-PD-1 and anti-LAG3 antibodies were dosed intraperitoneally every 5 days at 10 mg/kg body weight. Start of treatments was considered Day 0 and dosing based on schedules continued as described until Day 35. Caliper measurements of tumors and body weights were captured twice weekly. Statistical analyses of tumor growth inhibition (TGI) were performed by student t-test comparing treatment group to vehicle group. Survival analyses were performed by log-rank (Mantel-Cox) test to determine significance between groups. Survival was defined as timepoint when mice exited study with tumors larger than 1800 mm3, an animal protocol-defined humane endpoint.


As shown in FIG. 1A & Table 6, each monotherapy had partial anti-tumor efficacy in the CT26 colorectal model resulting in significant tumor growth inhibition (TGI) compared to vehicle control animals. Dual checkpoint blockade with anti-PD-1+anti-LAG3 was better than either monotherapy (Table 6). Similarly, lenvatinib+anti-PD-1 treatment had better efficacy over each single agent. The triple combination therapy with Lenvatinib+anti-PD-1+anti-LAG3 had more mice surviving until the end of the study (FIG. 1B & Table 7) and a trend towards better TGI than lenvatinib+anti-PD-1 therapy (not statistically significant).


In the KPC-2838c3 pancreatic model, neither anti-PD-1 and anti-LAG3 checkpoint blockade had notable anti-tumor efficacy as monotherapies or in combination (FIG. 2). In contrast, lenvatinib treatment elicited notable TGI. This suggests that lenvatinib can provide benefit to tumors which do not respond to anti-PD-1+anti-LAG3 dual checkpoint blockade. None of double or triple combination groups which contained lenvatinib were statistically significant from each other at the end of study (Table 8).


All treatment regimens were well tolerated by mice as assessed by body weight gain (FIGS. 3A & 3B), early mortality, and clinical observations.









TABLE 6







Summary CT26 study tumor growth inhibition (TGI) of treatment


groups respective to Vehicle-treated animals at Day 17


when all animals from Vehicle group exited study.










Treatment
TGI (p-value)







Lenvatinib
54%




(p < 0.001)



Anti-PD-1
38%




(p = 0.011)



Anti-LAG3
38%




(p = 0.002)



Anti-PD-1 + anti-LAG3
55%




(p = 0.002)



Lenvatinib + anti-PD-1
79%




(p < 0.001)



Lenvatinib + anti-LAG3
58%




(p < 0.001)



Lenvatinib + anti-PD-1 + anti-
87%



LAG3
(p < 0.001)

















TABLE 7







Summary of CT26 study log-rank p-values to determine


differences in survival of monotherapy treatment


groups compared to triple combination group.








Group survival comparison
p-value





Lenvatinib vs Lenvatinib + anti-PD-1 + anti-LAG3
p = 0.014


Anti-PD-1 vs Lenvatinib + anti-PD-1 + anti-LAG3
p = 0.012


Anti-LAG3 vs Lenvatinib + anti-PD-1 + anti-LAG3
p < 0.001


Anti-PD-1 + anti-LAG3 vs Lenvatinib + anti-PD-1 + anti-
p = 0.082


LAG3


Lenvatinib + anti-PD-1 vs Lenvatinib + anti-PD-1 + anti-
p = 0.282


LAG3


Anti-PD-1 vs anti-PD-1 + Lenvatinib
p = 0.024


Lenvatinib vs anti-PD-1 + Lenvatinib
p = 0.018
















TABLE 8







1-Way ANOVA analysis of KPC-2838 tumors at end of study


(Day 41), only groups which contained lenvatinib therapy.








Group survival comparison
p-value





Lenvatinib vs Lenvatinib + anti-PD-1
p = 0.819


Lenvatinib vs Lenvatinib + anti-LAG3
p = 0.729


Lenvatinib vs Lenvatinib + anti-PD-1 + anti-LAG3
p > 0.999


Lenvatinib + anti-PD-1 vs Lenvatinib + anti-LAG3
p = 0.999


Lenvatinib + anti-PD-1 vs Lenvatinib + anti-PD-1 + anti-
p = 0.793


LAG3


Lenvatinib + anti-LAG3 vs Lenvatinib + anti-PD-1 + anti-
p = 0.701


LAG3









REFERENCES



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  • 3. Yang et al. PD-1 interaction contributes to the functional suppression of T-cell responses to human uveal melanoma cells in vitro. Invest Ophthalmol Vis Sci. 2008 Jun.; 49(6(2008): 49: 2518-2525.

  • 4. Ghebeh et al. The B7-H1 (PD-L1) T lymphocyte-inhibitory molecule is expressed in breast cancer patients with infiltrating ductal carcinoma: correlation with important high-risk prognostic factors. Neoplasia (2006) 8: 190-198.

  • 5. Hamanishi J et al. Programmed cell death 1 ligand 1 and tumor-infiltrating CD8+ T lymphocytes are prognostic factors of human ovarian cancer. Proceeding of the National Academy of Sciences (2007): 104: 3360-3365.

  • 6. Thompson R H et al. Significance of B7-H1 overexpression in kidney cancer. Clinical genitourin Cancer (2006): 5: 206-211.

  • 7. Nomi, T. Sho, M., Akahori, T., et al. Clinical significance and therapeutic potential of the programmed death-1 ligand/programmed death-1 pathway in human pancreatic cancer. Clinical Cancer Research (2007):13:2151-2157.

  • 8. Ohigashi Y et al. Clinical significance of programmed death-1 ligand-1 and programmed death-1 ligand 2 expression in human esophageal cancer. Clin. Cancer Research (2005): 11: 2947-2953.

  • 9. Inman et al. PD-L1 (B7-H1) expression by urothelial carcinoma of the bladder and BCG-induced granulomata: associations with localized stage progression. Cancer (2007): 109: 1499-1505.

  • 10. Shimauchi T et al. Augmented expression of programmed death-1 in both neoplasmatic and nonneoplastic CD4+ T-cells in adult T-cell Leukemia/Lymphoma. Int. J. Cancer (2007): 121:2585-2590.

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  • 15. Ahmadzadeh M et al. Tumor antigen-specific CD8 T cells infiltrating the tumor express high levels of PD-1 and are functionally impaired. Blood (2009) 114: 1537-1544.

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All references cited herein are incorporated by reference to the same extent as if each individual publication, database entry (e.g. Genbank sequences or GeneID entries), patent application, or patent, was specifically and individually indicated to be incorporated by reference each and every individual publication, database entry (e.g. Genbank sequences or GeneID entries), patent application, or patent, each of which is clearly identified in compliance with 37 C.F.R. § 1.57(b)(2), even if such citation is not immediately adjacent to a dedicated statement of incorporation by reference. The inclusion of dedicated statements of incorporation by reference, if any, within the specification does not in any way weaken this general statement of incorporation by reference. Citation of the references herein is not intended as an admission that the reference is pertinent prior art, nor does it constitute any admission as to the contents or date of these publications or documents. To the extent that the references provide a definition for a claimed term that conflicts with the definitions provided in the instant specification, the definitions provided in the instant specification shall be used to interpret the claimed invention.

Claims
  • 1. A method for treating cancer in an individual comprising administering to an individual a PD-1 antagonist, a LAG3 antagonist, and lenvatinib or a pharmaceutically acceptable salt thereof.
  • 2. The method of claim 1, wherein the PD-1 antagonist is a monoclonal antibody, or an antigen binding fragment thereof.
  • 3. The method of claim 1, wherein the individual is a human and the PD-1 antagonist is a monoclonal antibody, or an antigen binding fragment thereof, that specifically binds to human PD-1 and blocks the binding of human PD-L1 to human PD-1.
  • 4. The method of claim 3, w % herein the PD-1 antagonist also blocks binding of human PD-L2 to human PD-1.
  • 5. The method of claim 4, wherein the PD-1 antagonist is an antibody, or antigen binding fragment thereof, that comprises: (a) a light chain variable region comprising light chain CDR1, CDR2 and CDR3 of SEQ ID NOs: 1, 2 and 3, respectively and (b) a heavy chain variable region comprising heavy chain CDR1, CDR2 and CDR3 of SEQ ID NOs: 6, 7 and 8, respectively.
  • 6. The method of claim 4, wherein the PD-1 antagonist is an anti-PD-1 antibody that comprises a heavy chain and a light chain, and wherein the heavy chain comprises a heavy chain variable region comprising SEQ ID NO:9 and the light chain comprises a light chain variable region comprising SEQ ID NO: 4.
  • 7. The method of claim 4, wherein the PD-1 antagonist is an anti-PD-1 antibody that comprises two heavy chains and two light chains, and wherein the heavy chain comprises SEQ ID NO:10 and the light chain comprises SEQ ID NO:5.
  • 8. The method of claim 4, wherein the PD-1 antagonist is pembrolizumab.
  • 9. The method of claim 4, wherein the PD-1 antagonist is a pembrolizumab variant.
  • 10. The method of claim 4, wherein the PD-1 antagonist is nivolumab.
  • 11. The method of any one of claims 1 to 10, wherein the LAG3 antagonist is a monoclonal antibody, or an antigen binding fragment thereof that blocks binding of LAG3 to MHC Class 11 molecules.
  • 12. The method of any one of claims 1 to 10, wherein the LAG3 antagonist is an antibody, or antigen binding fragment thereof, that comprises: (a) a light chain variable region comprising light chain CDR1, CDR2 and CDR3 of SEQ ID NOs: 26, 27 and 28 and (b) a heavy chain variable region comprising heavy chain CDR1, CDR2 and CDR3 of SEQ ID NOs: 29, 30 and 31.
  • 13. The method of any one of claims 1 to 10, wherein the LAG3 antagonist is an anti-LAG3 monoclonal antibody that comprises a heavy chain and a light chain, and wherein the heavy chain comprises a heavy chain variable region comprising SEQ ID NO:25 and the light chain comprises a light chain variable region comprising SEQ ID NO: 24.
  • 14. The method of any one of claims 1 to 10, wherein the LAG3 antagonist is an anti-LAG3 antibody that comprises two heavy chains and two light chains, and wherein the heavy chain comprises SEQ ID NO:23 and the light chain comprises SEQ ID NO:22.
  • 15. The method of any one of claims 1 to 10, wherein the LAG3 antagonist is an Ab6 variant.
  • 16. The method of any one of claims 1 to 10, wherein the LAG3 antagonist is an Ab6 antibody.
  • 17. The method of claim 1, wherein the PD-1 antagonist is a humanized anti-PD-1 antibody that comprises a heavy chain and a light chain, and wherein the heavy chain comprises a heavy chain variable region comprising heavy chain CDRs of SEQ ID NOs: 6, 7 and 8 and the light chain comprises a light chain variable region comprising light chain CDRs of SEQ ID NOs: 1, 2 and 3; and the LAG3 antagonist is a humanized anti-LAG3 antibody that comprises a heavy chain and a light chain, and wherein the heavy chain comprises a heavy chain variable region comprising heavy chain CDRs of SEQ ID NOs: 29, 30 and 31 and the light chain comprises a light chain variable region comprising light chain CDRs of SEQ ID NOs: 26, 27 and 28.
  • 18. The method of claim 1, wherein the PD-1 antagonist is an anti-PD-1 antibody that comprises a heavy chain and a light chain, and wherein the heavy chain comprises a heavy chain variable region comprising SEQ ID NO:9 and the light chain comprises a light chain variable region comprising SEQ ID NO: 4; and the LAG3 antagonist is an anti-LAG3 antibody that comprises a heavy chain and a light chain, and wherein the heavy chain comprises a heavy chain variable region comprising SEQ ID NO:25 and the light chain comprises a light chain variable region comprising SEQ ID NO: 24.
  • 19. The method of claim 1, wherein the PD-1 antagonist is an anti-PD-1 antibody that comprises a heavy chain and a light chain, and wherein the heavy chain comprises SEQ ID NO:10 and the light chain comprises SEQ ID NO: 5; and the LAG3 antagonist is an anti-LAG3 antibody that comprises a heavy chain and a light chain, and wherein the heavy chain comprises SEQ ID NO:23 and the light chain comprises SEQ ID NO: 22.
  • 20. The method of any one of claims 1 to 19, wherein the PD-1 antagonist and LAG3 antagonist are co-formulated.
  • 21. The method of any one of claims 1 to 19, wherein the PD-1 antagonist and the LAG3 antagonist are co-administered.
  • 22. The method of any one of claims 1 to 21, wherein lenvatinib mesylate is administered.
  • 23. The method of claim 1, comprising administering via intravenous infusion to the individual a composition comprising 200 mg of pembrolizumab and 800 mg of anti-LAG3 antibody Ab6 every three weeks, and orally administering 8-20 mg of lenvatinib or a pharmaceutically acceptable salt thereof.
  • 24. The method of claim 1, comprising co-administering 200 mg pembrolizumab and 800 mg Ab6 on Day 1 every three weeks for intravenous infusion, and 8-20 mg of lenvatinib or a pharmaceutically acceptable salt thereof orally daily.
  • 25. The method of claim 1, comprising administering 400 mg pembrolizumab on Day 1 every six weeks and 800 mg Ab6 on Day 1 every three weeks for intravenous infusion, and orally administering daily 8-20 mg of lenvatinib or a pharmaceutically acceptable salt thereof.
  • 26. The method of any one of claims 1 to 25, wherein the individual has not been previously treated with anti-PD-1 or anti-PD-L1 therapy.
  • 27. The method of any one of claims 1 to 25, wherein the individual progressed with previous treatment with anti-PD-1 or anti-PD-L1 therapy.
  • 28. The method of any one of claims 1 to 25, wherein the individual progressed with previous treatment with PD-1 or PD-L1 checkpoint inhibitor in combination or in sequence with a VEGF receptor tyrosine kinase inhibitor.
  • 29. The method of any one of claims 1 to 28, wherein the cancer is colorectal cancer.
  • 30. The method of any one of claims 1 to 26, wherein the cancer is non-microsatellite instability-high (non-MSI-H) or proficient mismatch repair (pMMR) colorectal cancer.
  • 31. The method of any one of claims 1 to 28, wherein the cancer is renal cell carcinoma.
  • 32. The method of any one of claims 1 to 28, wherein the cancer is clear cell renal cell carcinoma.
PCT Information
Filing Document Filing Date Country Kind
PCT/US2021/050143 9/14/2021 WO
Provisional Applications (1)
Number Date Country
63078485 Sep 2020 US