Comparative Microarray Sequencing of Chimpanzee genomes

Information

  • Research Project
  • 6644535
  • ApplicationId
    6644535
  • Core Project Number
    R43HG002885
  • Full Project Number
    1R43HG002885-01
  • Serial Number
    2885
  • FOA Number
  • Sub Project Id
  • Project Start Date
    6/6/2003 - 23 years ago
  • Project End Date
    3/7/2004 - 22 years ago
  • Program Officer Name
    PETERSON, JANE
  • Budget Start Date
    6/6/2003 - 23 years ago
  • Budget End Date
    3/7/2004 - 22 years ago
  • Fiscal Year
    2003
  • Support Year
    1
  • Suffix
  • Award Notice Date
    6/4/2003 - 23 years ago
Organizations

Comparative Microarray Sequencing of Chimpanzee genomes

[unreadable] DESCRIPTION (provided by applicant): With the finishing of the human genome sequence, there are fundamental reasons to sequence the chimpanzee genome. First, the chimpanzee provides an excellent animal model for biomedical research of human diseases. Identifying fixed sequence variants responsible for differential gene expression may explain the different physiological responses to shared diseases such as HIV, cancer and Alzheimer's disease. The 98-99% DNA sequence similarity and the near identity of proteins between human and chimpanzee suggest species-specific gene regulations likely account for their biological distinctiveness such as cranial morphology and cognition. Additionally, comparison of human and chimpanzee polymorphism rates and fixed differences across the genome will indicate regions in which selective pressure may play a role in maintaining genomic integrity. Such regions are candidates for further investigation of their biological roles. Finally, comparisons to other non-human primates would indicate the lineage of origin in fixed differences, pinpointing regions involved in distinguishing humans from chimpanzees. For these comparative sequence studies, an understanding of the intraspecific genetic variation found within chimpanzee populations is required. Perlegen's microarray technology allows rapid, economical, and accurate determination of where and what sequence differences exist in highly conserved regions between human and chimpanzee genomes. [unreadable] [unreadable]

IC Name
NATIONAL HUMAN GENOME RESEARCH INSTITUTE
  • Activity
    R43
  • Administering IC
    HG
  • Application Type
    1
  • Direct Cost Amount
  • Indirect Cost Amount
  • Total Cost
    100698
  • Sub Project Total Cost
  • ARRA Funded
  • CFDA Code
    172
  • Ed Inst. Type
  • Funding ICs
    NHGRI:100698\
  • Funding Mechanism
  • Study Section
    ZRG1
  • Study Section Name
    Special Emphasis Panel
  • Organization Name
    PERLEGEN SCIENCES, INC.
  • Organization Department
  • Organization DUNS
  • Organization City
    MOUNTAIN VIEW
  • Organization State
    CA
  • Organization Country
    UNITED STATES
  • Organization Zip Code
    94043
  • Organization District
    UNITED STATES