The present invention generally relates to micro-patterning and particularly to micro-patterning a surface to functionalize the surface.
This section introduces aspects that may help facilitate a better understanding of the disclosure. Accordingly, these statements are to be read in this light and are not to be understood as admissions about what is or is not prior art.
Functionalizing solid flat surfaces or micro/nano sensor surfaces is a widely used procedure in many fields including biology, chemistry, medicine, and biomedical engineering. This procedure is usually performed by pipetting liquids onto an area larger than the intended area (in order to ensure sufficient coverage). Patterning of surfaces in order to result in gradients where the deposited pattern changes (i.e., in amount or in a particular dimension) has been used in diverse applications ranging from biosensing to cell culture systems. Several methods have been employed to create such gradients including diffusion-based microfluidics, laser desorption, and photochemistry. However, such methodologies often require complex equipment and harsh treatments which prevent the widespread use of gradient patterning.
Techniques such as micro-contact printing do exist but they require a “stamp” be prepared beforehand. The user cannot change the stamp pattern. If the user decides that a new pattern is needed, the user has to make a new stamp with the desired new pattern.
Therefore, there is an unmet need for a novel approach that can selectively and robustly functionalize a surface by depositing biological or chemical traces on the surface.
An intermediate composite capable of transferring a biological or chemical material to be patterned on a surface is disclosed. The intermediate composite includes a hydrogel, and particles suspended in the hydrogel, generating a particle-gel composite (composite), the composite is configured to absorb a biological or chemical material (agent), and further configured to deposit the agent when the composite is positioned proximate to a surface on which the agent is to be deposited.
A method of depositing biomolecules or chemical material on a surface is also disclosed. The method includes suspending spores in a hydrogel, generating a hydrogel-spore composite (intermediate composite). The method also includes embedding biomolecule or chemical material (agent) into the intermediate composite thereby allowing absorption of the agent by the spores generating a composite (Composite). In addition, the method includes micro-manipulating the Composite proximate to a surface resulting in deposition of the agent on the surface.
For the purposes of promoting an understanding of the principles of the present disclosure, reference will now be made to the embodiments illustrated in the drawings, and specific language will be used to describe the same. It will nevertheless be understood that no limitation of the scope of this disclosure is thereby intended.
A novel approach that can selectively and robustly functionalize a surface by depositing biological or chemical traces on the surface is disclosed. The approach includes a patterning strategy based upon a spore-hydrogel composite material, e.g., by suspending Bacillus subtilis (also referred to as B. subtilis) spores within a humidity sensitive hydrogel. The spore-hydrogel composite provides the capability to absorb chemicals and biological agents (generally referred to as agent), collectively (i.e., spore-hydrogel composite and agent) referred to as Composite, thereby generating a micro-environment that can be manipulated by a micromanipulator in order to deposit the absorbed agent onto a surface. Deposition on to the surfaces can be carried out in a variety of user-defined patterns. For example, a user can functionalize a surface in a zig-zag, circular or other more complicated patterns. One can engineer the properties of the Composite by controlling the amount and the type of the spores introduced into the Composite. Moreover, by controlling the humidity in the environment, the user can also control the amount of agent that is released by the Composite. Hence, it is possible to generate user-defined patterns with user-defined concentrations. Controlling the humidity level is one example of controlling the chemical release.
It should be understood that the approach described herein is not limited to B. subtilis. Other spores can also be employed. Further, the approach is not intended to be limited to spores. Materials other than spores can be employed, such as spheres, cells, micro particles or nano particles that have organic or inorganic content.
Bacillus subtilis is a commonly found bacterium usually recovered from water, soil, air, and decomposing plant residue. The bacterium produces an endospore that allows it to endure extreme conditions of heat and desiccation in the environment. B. subtilis produces a variety of proteases and other enzymes that enable it to degrade a variety of natural substrates and contribute to nutrient cycling. However, under most conditions the organism is not biologically active but exists in the spore form. B. subtilis is considered a benign organism as it does not possess traits that cause disease.
A Hydrogels is a network of polymer chains that are generally hydrophilic, sometimes found as a colloidal gel in which water is the dispersion medium. Hydrogels are highly absorbent (they can contain over 90% water) natural or synthetic polymeric networks. Hydrogels also possess a degree of flexibility very similar to natural tissue, due to their significant water content.
B. subtilis can swell and absorb water from humid environments in addition to acting as a micro-carrier when brought into coupling with a biological/chemical agent. In the present disclosure, the ability of B. subtilis to act as such a carrier is demonstrated by loading B. subtilis spores that are embedded in a hydrogel forming the hydrogel-spore composite, altogether including the dye forming the Composite. For example, by saturating spores with a fluorescent dye and subjecting the Composite to various humidity levels, the concentration of dye released from the hydrogel surface can be controlled. In this disclosure it is demonstrated therefore that the carrier (B. subtilis spores in the hydrogel-spore composite) can be used to engineer the concentration of the agent within the hydrogel-spore composite, and hence this approach can be exploited as an additional parameter to control the agent release process. The fluorescent dye used here is an example of a material that can be used. As discussed above, it should be appreciated that the use of the dye is used inter alia to demonstrate the effectiveness of the novel arrangement according the present disclosure, and that the dye can be replaced with a variety of agents such as biomolecules including proteins, DNA, RNA, small molecules, peptides, ions, salts, sugars, cells, and pathogens including viruses and bacteria.
Referring back to
To further improve the concentration of the agent within the Composite 104, the agent molecules 124 can be electrically charged with a charge opposite to the charge of the spores 122.
It should be appreciated that the direct use of spores to pattern on surfaces proves difficult due to the brittle nature of spore aggregates and the small size of spores (approximately 1 μm). The arrangement according to the present disclosure address this problem by suspending the spores in a stimuli-responsive hydrogel to improve the structural integrity of the spores while maintaining access to environmental humidity. In addition, the large size of the hydrogel construct (50-100 μm) facilitates manual manipulation using micromanipulators, thus allowing easy, user-controlled patterning using the Composite 104.
The hydrogel-spore composites were prepared by drying either 0.1 ml or 0.2 ml of B. subtilis spores, 107 CFU (MESA LABS) (the term CFU is generally used to mean colony forming units) and suspending the resultant spore powder into 0.9 ml of 25.9 mg acrylamide (SIGMA-ALDRICH) containing 75.2 μl methacrylic acid (SIGMA-ALDRICH, distilled to remove inhibitor), 12.2 mg N,N-methylenebisacrylamide (Polysciences Inc.), and 75 μl N,N,N,N-tetramethylethylenediamine (SIGMA-ALDRICH) dissolved in deionized (DI) water. Gelation was induced by adding the solution into a 0.1 ml aqueous solution of 0.35 M ammonium persulfate and subsequently vortexing to ensure uniformity in spore distribution. A negative charge control was made by pipetting 0.5 μl poly(lactic-co-glycolic acid) (PLGA) microspheres (1% aqueous suspension of 1 μm microspheres, PHOSPHOREX INC.) into the solution prior to gelation in order to mimic the charge and size of spores within the gel.
The binding and retention of avidin-fluorescein isothiocyanate (FITC) was verified by plating the hydrogel Composites on a glass slide, saturating the hydrogel with avidin-FITC (SIGMA-ALDRICH), and triple rinsing with running deionized water for 5 min.
The humidity response of hydrogels with different concentrations of spores was characterized. Experiments were conducted with hydrogels devoid of spores (hydrogel control) and those that had negatively charged PLGA microspheres instead of spores (charge control). A humidifier and a hygrometer were used to produce and measure the humidity in a chamber. First, hydrogel samples were saturated with avidin-FITC and allowed to dry. Small aliquots of each gel (approximately 50 μm in diameter) were grasped using a mechanical micromanipulator. The gel was placed in the humidity chamber for 2 min prior to patterning to acclimatize to the environment. However, the glass slide remained outside the chamber until immediately prior to patterning in order to avoid condensation on the surface. The gel was lowered until a meniscus formed on the glass slide, patterning a small circular spot on the surface. The gel sample was re-soaked fully for each humidity point to eliminate the effects of dye depletion from this experiment. The slide fluorescence profiles were immediately imaged to minimize photobleaching and were imported into a MATLAB algorithm for analysis. The intensity of each image was normalized to that of the background intensity of the glass slide and was averaged over the patterned area. This procedure was repeated for five different relative humidity levels, and three data points were obtained at each humidity level.
The level of fluorescent intensity deposited on the surface using the Composite is directly attributed to the ability of the Composite to bind higher concentrations of dye compared to the hydrogel and the charge control gel, thus creating a steeper gradient as the humidity is varied. The binding and retention experiment showed that charge plays a role in the ability of spores to bind higher levels of dye than hydrogel alone; however, the statistical difference from the charge control of the humidity response experiment suggests that the mechanism involves more than simple electrostatic interaction. Thus, there is a positive correlation between the peak concentration of patterned dye and the concentration of spores present in the Composite.
It should be noted that the amount of negatively charged surface area within the gel affects the rate at which surface concentration decreases as humidity increases. In the hydrogel control, as the humidity increases, the internal concentration decreases due to the increased volume of water. In the Composites, as the humidity increases, the internal concentration decreases as well. However, the dye bound to the charged surface has an increased diffusive flux due to the decreased concentration within the surrounding gel. This increases the diffusion from the spore to the surrounding gel, which attenuates the concentration lowering effects of increased humidity.
As described above, a novel method of patterning biomolecules on a surface has been developed. The method includes suspending spores in a hydrogel forming a Composite, embedding a set of biomolecules desired to be deposited onto a surface into the Composite, and micro-manipulating the Composite on the surface resulting in a deposition of the biomolecules on the surface. In one embodiment, the amount of biomolecules deposited is dependent on the humidity prevailing in the Composite. The humidity levels in the Composite can be controlled as described above. In one embodiment, for example, the spores can be Bacillus Subtilis. In other embodiments, spores other than Bacillus subtilis, such as Bacillis anthracis or other bacteria can be used to modify the properties of the hydrogel substrate. The spores or bacteria can be chosen based on the electrostatic, mechanical, optical, topographical, geometrical, material or chemical properties that may affect the type or the amount of the target dye or material that is to be released. In some embodiments of this disclosure, the use of spores can be totally replaced with the use of non-biological particles such as spheres, micro particles or nano particles that have organic or inorganic content including but not limited to magnetic particles, polystyrene particles, quantum dots that may attract and retain agents (e.g., biomolecules or chemicals to be released) by electrostatic, magnetic, steric, hydrophilic, hydrophobic, mechanical or chemical means. Further, in some embodiments, the material to be released to the surface can be biomolecules such as proteins, DNA, RNA, peptides, peptide nucleic acids, or small molecules, sugars, salts or ions. It should be further recognized, that in embodiments of this disclosure, the surface that receives the deposited material can be glass, silicon, silicon dioxide, indium tin oxide, polymeric, plastic, or metallic (meaning metal or alloy), including but not limited to gold, platinum, and other metals. The surface can be flat or irregular since the approach described in this disclosure allows depositing materials onto non-flat surfaces as well. For example, in one embodiment, the system can be used to deposit materials to the side of an object or selectively on the oblique planes of a prism like object. Further, it is envisioned that the surface can be that of a sensor or actuator or another device that needs the presence of certain chemicals or molecules or materials on it for operability or enhanced performance. Furthermore, while changes in humidity were accomplished by placing the spore-gel in a humidity chamber, selective humidity can be implemented on the surface by selectively applying the appropriate amount of vapor directly at the surface. While humidity was used as a stimulus in one of the embodiments described above to deposit and control the material, the stimulus that controls the material release need not be limited to humidity. For example, the release can be triggered or controlled by temperature, electric fields, magnetic fields, mechanical forces or by introduction of or exposure to other chemicals. It should be noted that such stimuli can be combined. For example, the stimuli of temperature and humidity can be used in combination to control the amount of material released from the Composite. In the approach described in this disclosure, the substrate material of the Composite may be different from a hydrogel and may include other gels, polymers or solids that can be manipulated by a pair of tweezers or similar manipulators. Also while a micromanipulator was discussed in the present disclosure for the purpose of manipulating the position of the Composite on to the surface, other devices and arrangements may be used to bring the Composite at a larger scale on to the surface.
While in this disclosure embodiments containing one Composite is described, it should be appreciated that multiple Composites can be employed in a patterning process of the type described in this disclosure. Further, the multiple Composites can contain varying chemistries or physical characteristics for the suspended particles. Furthermore, in utilizing multiple Composites and/or multiple chemistries or physical characteristics for the suspended particles, more than one stimulus can be utilized advantageously. The stimulus or stimuli can be chosen based on the effect of the stimulus or stimuli on the Composites and/or the suspended particles. Thus in a single patterning exercise, it is possible to combine a variety of Composites, a variety of suspended particles and a variety of stimuli. These possibilities can be exploited to control the rate of deposition and/or concentration gradients of the deposited materials.
It should be appreciated that the deposited agent, according to the present disclosure, can be deposited in a manner in which it generates a diffraction grating pattern. The agent can provide an affinity for binding to biological entities of particular variety, e.g., cells afflicted with a particular disease. The agent can then bind to those biological entities when a fluid containing those biological entities is passed over the deposited agent thereby generating a binding affinity to the agent. The diffraction grating pattern can then be used to quickly identify the bound biological entities using techniques known to a person having ordinary skill in the art.
It should be appreciated that the arrangement described herein for depositing the agent can be provided in an array. In other words, an array of micromanipulators can be grouped together to deposit various patterns of the agent on to the surface according to a user-defined pattern. In this embodiment, a larger pattern can be deposited in a shorter amount of time.
It should also be appreciated that the surface deposition of the agent can be accomplished on a combination of surface orientations, e.g., horizontal, vertical, angled, and any combination thereof.
Those having ordinary skill in the art will recognize that numerous modifications can be made to the specific implementations described above. The implementations should not be limited to the particular limitations described. Other implementations may be possible.
The present patent application is related to and claims the priority benefit of U.S. Non-Provisional patent application Ser. No. 14/824,577 filed Aug. 12, 2015, and to U.S. Provisional Patent Application Ser. No. 62/036,440, filed Aug. 12, 2014, the contents of each of which is hereby incorporated by reference in its entirety into this disclosure.
Number | Date | Country | |
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62036440 | Aug 2014 | US |
Number | Date | Country | |
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Parent | 14824577 | Aug 2015 | US |
Child | 15853894 | US |