Patent Application
20100278768
This invention is concerned with methods, compounds and compositions useful for the prevention or suppression of human malodour, in particular human axillary malodour.
It is known that fresh sweat is odourless and that odour is only formed upon contact of sweat with skin bacteria (for example bacteria of the genera of Staphylococcus and Corynebacteria) and it is believed that odourless molecules present in sweat are degraded by bacteria colonising the axilla. It is generally accepted (Labows et. al., Cosmet. Sci Technol. Ser. (1999), 20:59-82) that highly unpleasant malodour is released from fresh sweat mainly by the Cotynebacteria genus of bacteria. The principal constituents thought to be responsible for malodour include volatile steroids, volatile sulphur compounds and short-chain, branched fatty acids.
It has been suggested to treat malodour by eradicating the bacteria responsible for causing the odour. Indeed, commercially available cosmetic deodorants often contain antibacterial compounds that generally inhibit the growth of skin microflora. Antibacterial compounds currently used in deodorant products include, for example Triclosan (2,4,4′ trichloro-2′ hydroxy-diphertyl-ether). However, a draw-back to the use of antibacterials is the potential for disturbing the equilibrium of the skin's natural microflora.
It has also been suggested to include compounds in a deodorant that would specifically target and suppress the biochemical reactions that transform odourless precursors present in sweat into volatile malodorous steroids or sulphur compounds. Specifically, there have been several publications concerned with the inhibition of enzymes that are thought to be responsible for the release of volatile steroids or volatile sulphur products. In this regard see U.S. Pat. Nos. 5,487,886; 5,213,791 and 5,595,728 which describe amino acid β-lyase inhibitors for use in deodorants. These agents are thought to block the release of sulphur volatiles from cysteine derivatives. U.S. Pat. Nos. 5,676,937 and 5,643,559 describe inhibitors of bacterial exoenzymes, namely sulphatases and glucuronidases. These compounds are supposed to reduce the release of volatile steroids from the corresponding sulphates or glucuronides. Patent application WO 00/01355 describes inhibition of steroid reductases. Finally, in German patent applications DE 19858811A1 and DE 19855956A1 the use of esterase inhibitors as deodorant active ingredients is described.
However, fatty acids, in particular short chain, branched fatty acids are known to play a role in axillary malodour, and are particularly foul smelling. Whereas WO 00/01356 attributes axillary malodour to the catabolism of long-chain fatty acids and teaches the use of certain perfumes to inhibit such catabolism, the art does not reflect an appreciation of the enzymatic process resulting in the release of malodorous fatty acids, in particular short chain, branched fatty acids and therefore does not teach how malodour from these sources may be prevented or suppressed.
The applicant has now discovered the mechanism of the release of fatty acids in sweat and has found an enzyme thought to be responsible for transforming odourless precursor compounds found in sweat, into malodorous fatty acids. The applicant has also found specific inhibitors of the enzyme and screening tools for identifying potential inhibitors, and also methods and compositions for preventing or suppressing malodour. These and other aspects of the present invention will become apparent to those skilled in the art from the following description.
The invention provides in a first aspect an enzyme that mediates in a biochemical process whereby essentially odourless precursor compounds found in sweat are cleaved to release malodorous compounds, particularly malodorous fatty acids, more particularly malodorous short chain, branched fatty acids.
The enzyme of the present invention was isolated from the bacteria of the genus Corynebacteria that can be found colonising the axilla, in particular certain Corynebacteria sp., more particularly Corynebacteria striatum Ax 20 which has been submitted on the 26, April 2001 to the International Depository Authority DSMZ-Deutsche Sammlung Von Mikrooganismen Und Zellkulturen GmbH, D-38124 Braunschweig. The Accession Number provided by the International Depository Authority is DSM 14267.
The enzyme has not heretofore been available in isolated form. By “isolated” is meant that the enzyme is removed from its original environment, i.e. from the environment in which it is naturally occurring. The present invention therefore provides the enzyme in isolated form, more particularly in isolated, purified form. By “purified form” is meant at least 80%, more particularly greater than 90%, still more particularly 95%, most particularly 99% or greater with respect to other protein and/or nucleic acid contaminants. The enzyme may be characterised by the amino acid sequence set forth in SEQ ID NO: 1. However, also included in the scope of the invention are proteins or polypeptides, e.g. enzymes that comprise amino acid sequences that are substantially similar to the amino acid sequence as set forth in SEQ ID NO: 1. In its broadest sense, the term “substantially similar” when used in relation to an amino acid sequence, means a sequence corresponding to a reference amino acid sequence, wherein said corresponding sequence encodes for a polypeptide or protein, e.g. an enzyme having substantially the same structure and same function as the enzyme encoded for by the reference amino acid sequence. The percentage identity in sequences may be for example, at least 80%, particularly at least 90% and most particularly at least about 95% of the amino acid residues match over a defined length of the molecule and includes allelic variations. Sequence comparisons may be carried out using a Smith-Waterman sequence alignment algorithm which is known in the art.
Partial amino acid sequences of the enzyme set forth in SEQ ID NO: 2; NO: 3, and NO: 4 comprise additional aspects of the invention.
The amino acid sequence set forth in SEQ ID NO: 1 may be derived from the open reading frame contained in SEQ ID NO: 5. Accordingly, the invention provides in another of its aspects an isolated nucleic acid, for example set forth in SEQ ID NO: 5, encoding for an enzyme having an amino acid sequence set forth in SEQ ID NO: 1.
All sequence data may be obtained according to techniques commonly known in the art.
An enzyme of the present invention may have a molecular weight of 43 to 48 kDa. In particular, it may have an apparent molecular mass on SDS-PAGE of 48 kDa and an effective molecular mass of 43365 Da as determined by nano-ESI MS (electron spray ionisation mass spectrometry) analysis and also derived from the amino acid sequence.
An enzyme of the present invention mediates in a biochemical process whereby essentially odourless precursor compounds are cleaved to release malodorous compounds characteristically found in sweat. The precursor compounds are substrates that may generally be described as derivatives of L-glutamine, in particular L-glutamine derivatives wherein the Na atom of the L-glutamine residue is acylated with a residue of a malodorous compound, in particular a fatty acid residue, more particularly a short chain, branched fatty acid residue. One example of such a precursor compound that was isolated from human sweat has the structure:
Cleavage of this substrate at the Na position releases the 3-hydroxy-3-methyl-hexanoic acid, itself having a pungent odour, which dehydrates to give 3-methyl-3-hexenoic acid which is another key malodour volatile in human sweat. Proteins or polypeptides, e.g. enzymes that act to cleave substrates of the type referred to hereinabove to release malodorous acids are within the ambit of the present invention.
An enzyme according to the present invention may be particularly active in relation to certain substrates. For example, it can recognise Na-acylated-L-glutamine substrates. However, it is not able to cleave similar acylated derivatives of related amino acids such as L-glutamate, L-aspartate or L-asparagine; nor does it recognise substrates wherein the Ng or the COOH group of the L-glutamine moiety is substituted. Furthermore, it is stereospecific, for example it recognises derivatives of L-glutamine and not the analogues derived from D-glutamine. Having regard to the substrate specificity, an enzyme of the present invention may be described as an aminoacylase, more particularly, an Na-acyl-glutamine-aminoacylase. The acyl group at the Na atom can vary widely, and the enzyme may cleave substrates for a wide variety of different smelling and non-smelling acids and other compounds. It may also, in addition to amide bonds, cleave carbamate bonds at the Na position thereby mediating in the release of an alcohol, CO2 and L-glutamine. It may also cleave acylated derivatives of L-glutamine where the Na atom has been replaced by an oxygen atom, i.e. oxo-glutamine-derivatives.
Further, the enzyme requires as a cofactor a zinc ion. In this respect and in its ability to cleave amide-bonds, it may be considered to be related to the group of enzymes known as zinc-metallopeptidases. More specifically, since it may cleave an amide-bond situated next to a terminal carboxyl group, it may also be considered to be related to the group of enzymes known as the zinc-carboxypeptidases.
Whereas an enzyme of the present invention is highly selective for the glutamine residue of a substrate, as mentioned above, applicant has surprisingly found that a wide variety of glutamine derivatives are able to fit into the enzyme. For example applicant found that disparate substrates such as Na-(3-hydroxy-3-methyl-hexanoyl)-L-glutamine, Na-(3-methyl-2-hexenoyl)-L-glutamine, Na-lauroyl-L-glutamine, Na-(11-undecenoyl)-L-glutamine, Na-tetradecanoyl-L-glutamine, Na-decanoyl-L-glutamine, Na-phenylacetyl-L-glutamine, Na-Carbobenzyloxy-L-glutamine (═Z-glutamine), Na-3,7-Dimethyl-6-octenyloxycarbonyl-L-glutamine, Na-(3-hexenyl)oxycarbonyl-L-glutamine, Na-Butyloxycarbonyl-L-glutamine, Na-(4-tert-Butylcyclohexyloxycarbonyl)-L-glutamine, Na-2-Phenylethyloxycarbonyl-L-glutamine, Na,-(3-Methyl-5-phenylpentanoxycarbonyl)-L-glutamine, Na-[2-Adainantan-1-yl-ethoxycarbonyl)-L-glutamine, Na-(2-Adamantan-1-yl-methoxycarbonyl)-L-glutamine, Na-[2-(2,2,3-trimethyl-cyclopent-3-enyl)-ethoxycarbonyl)-L-glutamine, and Na-(4-methoxy-phenylsulfanylcarbonyl)-L-glutamine are all able to be cleaved by enzyme. These findings, together with knowledge as to the nature of metallopeptidases, suggest that an enzyme of the present invention has a high specificity for glutamine at its so-called “S1′-site”, but will accept a wide variety of substituents at the Na-atom of the substrate provided those substituents are sufficiently bulky and hydrophobic to be received into the so-called “S1 site” of the enzyme. The terms “S1 site” and “S1′ site” as used herein relate to the sites on metallopeptidase enzymes as will be apparent to a person skilled in the art.
An enzyme described hereinabove represents a particularly preferred embodiment of the present invention. However, other bacterial strains, for example other strains of Colynebacteria, or bacteria of the genus Staphylococci found in the microflora of the axilla also produce related enzymes that themselves mediate in biochemical reactions wherein L-glutamine derivatives are cleaved at Na. However, these related enzymes specifically cleave precursor compounds to release straight chain fatty acids, which acids play only a minor role in typical axilla malodour.
These related enzymes, and inhibitors thereof, also form embodiments of the present invention.
A further aspect of the invention comprises a method of isolating an enzyme described above. Enzyme of the present invention occurs intracellularly and can be released from the cells by mechanical disruption of the cell envelope. Thus, an enzyme may be isolated from cellular extracts obtained from wild-type bacterial strains, especially from strains of Corynebacteria isolated from the human axilla, in particular Corynebacterium striatum Ax 20.
Alternatively, an enzyme may be manufactured by recombinant means and the invention provides in another of its aspects such methods, recombinant vectors and their use as reagents in said manufacture, and procaryotic or eurocaryotic host cells transformed with said vectors.
Thus, an enzyme may be produced by growing host cells transformed by an expression vector comprising foreign nucleic acid that encodes for the enzyme under conditions such that it is expressed, and thereafter recovering it according to known techniques. In a particular embodiment of the invention a nucleic acid fragment that encodes for the SEQ ID NO: 5 or a substantially similar nucleic acid sequence coding for an enzyme with an amino acid sequence which is substantially the same as sequence SEQ ID NO 1, is introduced into an expression vector by operatively linking the nucleic acid to the necessary expression control regions required for gene expression. The vector is then introduced into an appropriate host cell, e.g. a bacterial host cell, more particularly E. Coli. Numerous expression vectors are known and commercially available, and the selection of an appropriate expression vector and suitable host cells which they can transform is a matter of choice for the skilled person. Examples of expression vectors and host strains are described in T. Maniatis et al. (Molecular Cloning, cold spring Harbor Laboratory, 1982), other examples of vector-host strain combinations are the vector pPROTet.E133 in strain DH5aPRO which may be obtained from Clontech (Palo Alto, Calif., USA) or the vector pBADgIIIA in strain TOP 10, which may be obtained from Invitrogen (Groningen, The Netherlands).
Recombinant production of an enzyme according to the invention is not limited to the production in bacterial hosts. Any other means known to those skilled in the art of producing an enzyme based on a defined genetic sequence may be used. Such methods include, for example the expression in genetically modified yeasts, in insect cells transformed with a modified baculovirus and in eucaryotic cell lines or the in vitro transcription and translation.
The enzyme produced according to methods described above may be purified according to known techniques. Thus, host-cells containing the enzyme may be extracted to release the enzyme, e.g. by mechanical disruption of the cells or by osmotic shock. Thereafter, crude enzyme may be separated from host cell debris and host cell protein and nucleic acid contaminants using well known techniques such as precipitation and chromatography. Any of the chromatography techniques known in the art for purifying proteins may be employed. For example, ion-exchange, hydrophobic interaction, reverse phase, and size exclusion chromatography steps may be employed in any suitable sequence. Optionally, after each chromatography step the eluted enzyme may be further purified by filtration and concentrated using, e.g. ultrafiltration techniques.
In another aspect of the invention there is provided a method of screening compounds as inhibitors of an enzyme as hereinabove described. In particular, in order to identify inhibitory compounds, the enzyme or cells or cell extracts containing the enzyme, obtained from any of the above described sources, may be incubated along with an appropriate substrate that is cleavable by the enzyme, and with potential inhibitory compounds. An appropriate substrate may be selected from any of the class of precursor compounds referred to hereinabove, in particular an Na-acylated L-glutamine or carbamate of glutamine. Particular useful substrates are Na-3-methyl-3-hydroxy-hexanoyl-glutamine, Na-lauroyl-L-glutamine (commercially available from Fluka, Buchs, Switzerland) and Na-carbobenzyloxy-L-glutamine (Z-glutamine; commercially available from Aldrich, Buchs, Switzerland). After a certain time of incubation, which may be determined according to routine experimentation, analysis may be performed by measuring the released acid or alcohol, or by measuring the amount of free L-glutamine. A particularly useful approach for high-throughput screening of potential inhibitors may be to measure the release of free L-glutamine by derivatising the free Na group with an amine-group derivatising agent, which upon reaction with the amine group forms a chromophore or a fluorescent molecule. Particularly useful in this regard may be the use of fluorescamine (commercially available from Fluka, Buchs, Switzerland) to form a fluorescent molecule upon reaction with L-glutamine. Finally, the cleavage of the L- glutamine-substrate may be compared to control reactions and the potential of the test compounds to inhibit the reaction may thereby be quantified.
Having regard to the nature of the enzyme and the screening method set forth above the skilled person will be able to derive compounds that are inhibitors of the enzyme in its mediation in the biochemical reaction resulting in the release of malodorous compounds, and these inhibitors form yet another aspect of the invention.
Potential inhibitors may be selected, by way of non-limiting example, from dithiols, which molecules are capable of strongly co-ordinating to an active-site zinc atom located on the enzyme. One example of such a compound is dithiothreitol (2,3-dihydroxy-butane-1,4-dithiol). Other zinc chelators may be useful inhibitors; such chelating agents may include o-phenanthroline, EDTA, Na-pyrithione, amino-tri(methylene-phosphonic acid), ethylene-diimino-dibutyric acid (EDBA), Ethylenediamine-2-2′-diacetic acid, pyridine- 2,6 dicarboxylic acid, Diethylenetriamine pentaacetate, Ethylenediamine disuccinic acid, and N,N,N′,N′-tetrakis-(2-pyridylmethyl)-ethylenediamine. A further group of inhibitors may be selected from Na-acyl-L-glutamines or carbamates of L-glutamine which introduce some steric hindrance into the moiety substituted at the Na atom. These inhibitors may compete with the natural precursor compounds found in sweat for the active zinc site on the enzyme, but display a reduced tendency, or no tendency, relative to the natural precursor compound, to cleave at the Na atom.
have been found to be particularly interesting inhibitors of the enzyme and these compounds form a preferred embodiment of the present invention.
In formula (I), Y represents a direct bond to X, or a divalent chain that may contain carbon, oxygen or nitrogen atoms, and may comprise functionality such as amide functionality —CONH-provided that the chain is not cleavable by the enzyme under condition of use. Preferably this divalent chain contains no more than 3, and preferably no more than 2 atoms in the chain.
X represents a zinc-chelating group, e.g. a group bearing carboxylic acid functionality, or more particularly a methylene thiol group (II), or a phosphinyl group (III)
As regards the group R1, given the broad range of substituents that can fit into the S1 site of the enzyme, the nature of this group may vary widely provided it is sufficiently hydrophobic and/or bulky to fit into this site. Preferably, it represents a linear, branched or cyclic carbon chain having about 1 to 14 carbon atoms, more particularly about 4 to 14 carbon atoms. The aforementioned chain may contain one or more heteroatoms such as O, N or S, and it may also contain unsaturation. The chain may support one or more substituents, for example amide, ester, keto, ether, amine or hydroxyl halogen, or aryl or heteroaryl substituents which aryl or heteroaryl groups may support substituents selected from amide, ester, keto, ether, amine, halogen, alkyl or hydroxyl. The term “aryl” or “heteroaryl” as used herein is preferably a mono-cyclic or polycyclic group containing from 6 to 14 carbon atoms, and as appropriate one or more heteroatoms such as O, N or S. By way of example, any of the substituents attached to the acyl carbonyl group of the substrates mentioned above would be suitable as a group R1.
More preferred groups R1 may be selected from a C1-14 alkyl, more preferably a C4-14alkyl, e.g. n-butyl or sec-butyl, or an alkyl group here-mentioned substituted with a phenyl group, or a phenyl group substituted with any of the substituents referred to above, e.g. a benzylic group or a phenylethyl group.
More preferred compounds of formula (I) are those compounds wherein
Y is selected from a direct bond to X, C1-3 alkylene, e.g. methylene, —CONH—, or —NH—, and
X is selected from methylene thiol (II) or phosphinyl (III).
Most preferred compounds of the present invention are those compounds of formula (I) wherein
Compounds of formula (I) contain chiral atoms and as such they can exist as diastereomeric mixtures or they may exist as pure stereo-isomers. Most preferred compounds have an S—configuration on the Glutamine moiety, and in the case of the methylene-thiol containing compounds also an S-configuration at the chiral centre in this group is preferred.
Examples of most preferred compounds are
wherein R1 is phenyl (5a) iso-C3H7 (5b); or n-C3H7 (5c); or,
wherein R1′ is phenyl (8a); iso-C3H7(8b); or n-C3H7(8c).
The compounds of the present invention may be synthesised by coupling together the amino acid residue, e.g. the glutamine residue with the residue R1—X—Y— according to methods known in the art using readily available starting materials or reagents.
The N-(sulfamylacyl)amino acids exemplified as (5a-c) above may be prepared in a manner set forth in Scheme I of
The skilled person will appreciate that other N-acylated glutamine compounds of the present invention may be synthesised in an analogous manner using appropriate reagents to provide the desired R1—X—Y-residue.
The phosphinic-type compounds may be prepared by condensation of a desired alkyl halide and phosphinic acid ammonium salt to give a compound (6), followed by a 1,4 addition of (6) to the ethyl-2-(N-trityl)carboxamidoethyl acrylate as set forth in Scheme 2 of
Further details regarding the synthesis of compounds of the present invention are disclosed in the Examples hereinbelow.
Applicant has disclosed a wide range of compounds with inhibitory properties. However, having regard to the wide substrate specificity of the enzyme of the present invention responsible for the release of the malodorous compounds found in sweat, and the reliable methodology for identifying inhibitors of the enzyme, the applicant is able to provide a novel method in the suppression of body odours which methods form an additional aspect of the invention.
Accordingly, the invention provides in another of its aspects, a method of suppressing axillary malodour comprising the step of providing a composition for application to a person in need of treatment, said composition containing an inhibitor compound and dermatologically acceptable vehicle therefor, said compound being selected from a screening of compounds for activity in the inhibition of the enzyme.
Compounds, which inhibit an enzyme of the present invention reduce the activity of the enzyme and may lead to a significant reduction of the release of malodour acids from odourless fresh sweat. Compounds of the present invention display inhibition of the enzyme at concentrations ranging from 10−3 to 10−8 Molar. The activity of the compounds as inhibitors may be measured in terms of either their IC50 values or their Ki values, both of which measures are well known to the person skilled in the art. As is well known, the IC50 value provides the concentration of an inhibitor needed to reduce enzyme velocity by half at a given substrate concentration. This value is dependent on the affinity of the substrate for the enzyme which is reflected in the value Km of the substrate. In this way, the Ki value may be determined for a given substrate and a given substrate concentration by measuring IC50 and then calculating according to the following formula
Ki values for certain preferred inhibitors are set forth in Example 8 below.
Compounds of the present invention may be added to any cosmetic and personal care products such as sticks, roll-ons, pump-sprays, aerosols, deodorant soaps, powders, solutions, gels, creams, sticks, balms and lotions to enhance the deodorising effect of these products.
Accordingly, the present invention relates to the use of inhibitor compounds in compositions for the elimination or suppression of malodour. The invention also relates to compositions comprising an odour suppressing quantity of an inhibitor of the enzyme and dermatologically acceptable vehicles which are generally well known in the art of cosmetic and personal care products and require no further elaboration here. Preferably, a compound of the present invention may be employed in said products in amounts of about 0.01 to 0.5% by weight.
In an alternative method of malodour prevention or suppression, instead of, or in addition to, employing inhibitors that act to prevent or suppress the activity of the enzyme, one may employ agents that reduce the expression of the enzyme in bacteria containing a gene coding for said enzyme. Such agents may be screened either using wild-type strains or genetically engineered strains of the bacteria expressing the enzyme. If wild-type strains are used, the level of enzyme expression may be directly measured under various environmental conditions and upon addition of potential inhibitory compounds. Alternatively, genetically engineered Corynebacteria that are transformed with a vector containing a reporter gene may be used. These vectors may contain the reporter gene under the control of the regulatory sequences for the enzyme expression, which regulatory sequence is contained in the SEQ ID NO: 6 and which forms another aspect of the invention. For this purpose, the regulatory sequence, or any part thereof, may be cloned upstream of the reporter gene into a broad host-range vector able to transform Corynebacteria. The reporter gene may thereby be put under the regulatory control of the genetic sequence which controls the expression of the enzyme. The vector obtained in this way may then transformed into a strain of Corynebacterium. Particularly useful vectors for this purpose are described by M. P. Schmitt (Infection and immunity, 1997, 65(11): 4634-4641) and by N. Bardonnet and C. Blanco (FEMS Microbiol Lett., 1991, 68(1):97-102). Particularly useful marker genes are lacZ (coding for β-galacturonidase, gfp (coding for the green fluorescent protein), luxABCD (coding for bacterial luciferase) and gusA (coding for glucuronidase). The genetically engineered strain may then be grown in the presence of a compound to be tested and the expression of the marker gene may be measured by conventional methods. Compounds that lead to a reduction in expression (i.e. reduce the level of mRNA) may reduce malodour formation by reducing the level of enzyme in the axilla.
There now follows a series of examples that serve to illustrate the invention.
Fresh axilla secretions were sampled from human panellists by washing the axilla with 10% ethanol. The samples were extracted with MTBE to remove interfering lipids. The hydrophilic phases obtained from the washings from several individuals were then pooled. This material was practically odourless, but upon hydrolysis of sub-samples with 1 M NaOH, it produced typical axilla malodour. To identify the malodour volatiles, hydrolysed sub-samples were extracted and concentrated by solid phase extraction and then analysed by GC-sniff. Peaks that were rated as having a strong odour and closely related to axilla malodour were analysed by GC-MS. The samples contained one particular peak of an acid very typical of axilla malodour. Based on the MS data the most probable structure of this peak was 3-hydroxy-3-methylhexanoic acid. This assumption was verified by synthesising this latter compound and comparing its spectra and retention times to the GC-MS data of the major malodour peak in the GC-sniff analysis. This new malodour compound is structurally related to the known sweat malodour acid 3-methyl-2-hexenoic acid, and it is transformed into this latter compound by dehydration upon prolonged incubation.
To identify the precursor for this acid, the pooled non-hydrolysed sample was separated on a Superdex gel filtration column (Pharmacia, Uppsala, Sweden) using NH4CO3/NaCl as the elution buffer. Individual fractions of this separation step were tested for the content of a malodour precursor by hydrolysis with 1 M NaOH. One fraction developed strong malodour upon hydrolysis and this malodour could be attributed to the release of 3-hydroxy-3-methyl-hexanoic acid by GC-MS analysis. This fraction was subjected to LC-MS analysis, It contained one major mass peak of 274 Da and an additional peak at 256 Da. The mass spectrum of the former peak suggested a compound where the 3-hydroxy-3-methyl-hexanoic acid is linked to one molecule of L-glutamine (i.e. Na-3-hydroxy-3-methyl-hexanoyl-L-glutamine), while the second peak could, based on its mass, correspond to the dehydrated analogue Na-3-methyl-2-hexenoyl-L-glutamine. Na-3-hydroxy-3-methyl-hexanoyl-L-glutamine was then synthesised and its MS spectrum and retention time in the LC-MS-analysis compared to and found identical with the compound isolated from natural sweat.
The axillary flora of 8 panellists was isolated with the detergent-scrub method: A 6 cm2 area of the axilla was scrubbed with a phosphate buffer at pH 7 containing 1% Tween 80. The samples were spread-plated on tryptic soy agar amended with 5 g/L of Tween 80 and 1 g/L of lecithin. Single isolates obtained after 48 h incubation were subcultured and characterised. A total of 24 individual strains were identified based on colony and cell morphology, gram-reaction, lipophilic growth, lipase reaction and API identification kits (bioMerieux, France; coryneforms with the API coryne kit and cocci with the ID Staph 32 kit). The strains were grown overnight in a liquid medium (Mueller-Hinton amended with 0.01% Tween 80), harvested by centrifugation and resuspended to a final OD600 of 1 in a semi-synthetic medium (Per litre: 3 g KH2PO4, 1.9 g K2HPO4, 0.2 g yeast extract, 0.2 g MgSO4, 1.4 g NaCl, 1 g NH4Cl, 10 mg MnCl2, 1 mg Fe3Cl2, 1 mg CaCl2). Aliquots of this stationary culture were then amended with a final concentration of 500 ppm of Na,-3-hydroxy-3-methyl-hexanoyl-L-glutamine (5% stock solution dissolved in methanol). After 24 h incubation (with shaking at 300 rpm; 36° C.) the samples were extracted and the amount of released 3-hydroxy-3-methyl-hexanoic acid was determined by capillary GC. Table 1 gives the results for a subset of the strains tested. From these results it appears that among the Corynebacteria isolated from the axilla some, but not all, are able to release 3-hydroxy-3-methyl-hexanoic acid form the synthetic precursor. The Corynebacteria which are able to conduct this biochemical reaction may be found in the group of the lipophilic and in the group of the non-lipophilic Colynebacteria. Therefore, a specific enzyme only present in some bacterial strains seems to be responsible for this cleavage. Since it releases axilla malodour the putative enzyme was named AMRE, which stands for ‘axillary malodour releasing enzyme’. Apparently the tested Staphylococci are not able to catalyse this reaction, which is in agreement with the observation, that only subjects with an axilla flora dominated by Criynebacteria produce the most typical axilla malodour (Labows et. al., Cosmet. Sci Technol. Ser. 1999, 20:59-82). However, when Na-lauroyl-L-glutamine was used as substrate in the same experiment, it was found that also other Corynebacteria and some Staphylococci can release lauric acid from this substrate. It therefore appears, that most axilla bacteria have a related enzyme, but that many can only release straight fatty acids which make a minor contribution to typical axilla malodour.
Staphylococcus capitis
Staphylococcus epidermidis
Micrococcus luteus
Corynebacterium bovis
Corynebacterium group G
Corynebacterium jeikeium
Corynebacterium jeikeium
Corynebacterium striatum . . .
Corynebacterium striatum Ax20 was selected to isolate and purify the enzyme responsible for the cleavage of the precursor Na-3-hydroxy-3-methyl-hexanoyl-L-glutamine. The strain was grown during 48 h in Mueller-Hinton broth amended with 0.01% Tween 80. A total volume of 2 L of culture was harvested by centrifugation. The pellet was washed in Buffer A (50 mM NaCl; 50 mM NaH2PO4/K2HPO4 buffer at pH 7) and this buffer was used throughout the whole purification procedure. The cells were disrupted mechanically by vortexing them with glass beads (425-600 um, Sigma, St-Louis, USA) during 30 mM at maximal speed. The crude cell lysate was then fractionated by precipitation with an increasing concentration of (NH4)2SO4. The precipitate obtained between 50% and 80% saturation of (NH4)2SO4 contained the active enzyme. This enriched sample was dissolved in Buffer A and then sequentially passed over four chromatography columns: DEAE Sepharose CL-6B anion exchange resin (Pharmacia, Uppsala, Sweden; elution with a linear gradient from 0 to 800 mM KCl); Phenyl-Sepharose hydrophobic interaction resin (Pharmacia; elution with a linear gradient from 1000 mM to 0 mM of (NH4)2SO4; Mono Q strong anion exchange column on the FPLC system (Pharmacia; elution with a gradient from 0 to 800 mM KCl) and finally Mono P weak anion exchange column on the FPLC (elution with a gradient from 0-800 mM KCl in a 50 mM Bis-Tris buffer instead of Buffer A). After each column separation the active fractions (determined by fluorescent activity assay with Na-lauroyl-L-glutamine as substrate, see example 8) were pooled and then desalted and concentrated by ultrafiltration (Amicon membrane YM10, Millipore, Bedford, US). The resulting active fractions after the last column separation contained one major protein band with an apparent molecular weight of about 48 kDa as determined by SDS-PAGE. Its effective molecular mass was determined by nano-ESI MS analysis and found to be 43365±5 Da. This enzyme retained all its activity if incubated with PMSF (Phenylmethylsulfonylfluoride, Roche Biochemicals, Mannheim, Germany) and Pefabloc SC (4-(2-aminoethyl)-benzenesulfonylfluoride, Roche Biochemicals), which are typical inhibitors for serin- and cystein proteases. On the other hand it was completely inhibited by 1 mM of EDTA and o-phenantrolin. This inhibition could be reversed by the addition of 1 mM ZnCl2. This indicates that the enzyme belongs to the class of zinc-dependent metallo-peptidases, requiring a Zn atom as cofactor. Finally, the enzyme was subjected to LC-ESI-MS/MS analysis after tryptic digestion and to analysis of its N-terminal amino acid sequence. This led to identification of its N-terminal amino acid sequence (SEQ ID NO: 2) and to the sequence of two internal peptides (SEQ ID NO: 3; SEQ ID NO: 4).
To understand in detail the structural requirements of substrates, the enzyme extracted from Corynebacterium striatum Ax20 was incubated with a wide variety of said compounds related to the originally isolated Na-3-methyl-3-hydroxy-hexanoyl-L-glutamine present in sweat. Each compound was used at a concentration of 500 ppm in Buffer A, and analysis of released acid or alcohol was done by capillary GC after 24 h of incubation. First, different modifications at the N-terminus were tested. It was found, that the enzyme can cleave such simple substrates as Na-lauroyl-L-glutamine and Na-carbobenzyloxy-L-glutamine (═Z-glutamine). From the latter it releases benzyl-alcohol. Other N-lauroyl-amino acids and Z-amino acids (all obtained from Fluka and Aldrich, Buchs, Switzerland) were thus tested, but it was found that among the 20 amino acids occurring in proteins, the enzyme only cleaves L-glutamine derivatives, and, to much lesser extent, L-alanine derivatives. The results of some of the substrates tested are summarised in Table 2. Furthermore the enzyme can cleave other carbamates of L-glutamine, also derivatives where the alcohol is a fragrance alcohol (for example citronellol, see Table 2 compound 5), and it can therefore be used to release pleasant smelling molecules from precursors. Indeed, it has broad specificity for substituents at Na, as reflected in compounds 1-5 (below) and as discussed above. Finally, it is stereospecific and cannot cleave derivatives of D-glutamine (Table 2, compound 19), it requires a free COOH group of the L-glutamine and does not cleave derivatives in which this group is linked to methanol or glycin (Table 2, compounds 20 and 21). It also cannot cleave a derivative in which the Nδ of glutamine is further derivatised (Table 2, compound 22).
1)− indicates no cleavage, + indicates cleavage <10%, ++ cleavage 10-50% and +++ cleavage over 50%.
Based on the partial amino acid sequence analysis (see example 3), degenerated primers were designed and used to amplify a 350 by and a 650 by fragment of the corresponding gene between the N-terminus (SEQ ID NO 2) and the two internal peptide sequences (SEQ ID NO 3 and 4). Chromosomal DNA of Ax 20 served as template. The primer with the sequence SEQ ID NO 7 successfully annealed at the sequence coding for the N-terminus and the primers with the sequence SEQ ID NO 8 and SEQ ID NO 9 annealed within the sequences coding for the internal peptides. Standard PCR conditions were used, and the annealing temperatures were optimised on a gradient cycler (T-Gradient, Biometra, Gottingen, Germany). The amplified DNA was cloned into the vector pGEM-T Easy (Promega, Madison, USA) and the nucleotide sequence determined on the ABI-Prism model 310 (PE Biosystems, Rotkreuz, Switzerland) using standard methods. Based on the obtained sequence, specific nested oligonucleotides were designed to clone the upstream (SEQ ID NO 10 and 11) and downstream region (SEQ ID NO 12 and SEQ ID NO 13). Chromosomal DNA Ax 20 was digested with SmaI and PvuII and ligated to the GenomeWalker Adaptor (Clontech Laboratories, Palo Alto, USA). The upstream and downstream regions were then amplified as described in the instructions to the Universal GenomeWalker™ kit (Clontech Laboratories, Palo Alto, USA), cloned into the vector pGEM T-easy and the nucleotide sequence determined. With the two enzyme digests two upstream (450 by and 1200 bp) and two downstream fragments (1200 by and 3000 bp) were obtained. The full coding sequence of the enzyme (SEQ ID NO 5) as well as upstream (SEQ ID NO 6) and downstream regions were contained in the cloned region. The deduced amino acid sequence of the open reading frame corresponding to the enzyme (SEQ ID NO 1) was compared to public protein sequence databases (Swissprot and GeneBank, bacterial sequences) and it was found to align very well to known aminoacylases, some carboxypeptidases and various putative peptidases identified in genome sequencing projects. A number of these enzymes are summarised into the peptidase family m40, also known as the ama/hipo/hyuc family of hydrolases.
The full-length sequence of the open reading frame coding for the enzyme was amplified with PCR from Chromosomal DNA of Ax20 using specific primers (SEQ ID NO 14 and SEQ ID NO 15). The amplified DNA fragment was then digested with the restriction enzymes NcoI and Hind III. It was then ligated into the vector pBADIIIA (Invitrogen, Groningen, The Netherlands) pre-digested with the same enzymes. The resulign plasmid pBADgIIIAMRE was transformed into the host strain E. Coli TOP 10 (Invitrogen). The strain was grown in LB broth until it reached an optical density of about 0.5 at 600 nm. The culture was induced with arabinose (0.2% final concentration) incubated for 4 h, harvested by centrifugation and disrupted by ultrasonication. Enzyme assays with Na-lauryl-Glutamine as substrate were performed in Buffer A with an incubation time of 1 h and a substrate concentration of 500 ppm. Table 3 give the activity of extracts obtained from wild-type cells and from extracts of the induced and nonindcued modified strains expressing the enzyme.
E. coli Top 10/
E. coli Top 10
E. Coli Top 10
Extracts of Ax 20 were prepared by mechanical disruption as described in Example 3. The extract (0.5 ml corresponding to 2 ml initial cell culture) was added to 3.5 ml of Buffer A and amended with 40 μl of substrate (Na-lauroyl-L-glutamine, 5% stock solution in methanol). Parallel samples were additionally amended with potential inhibitory compounds to give a final concentration of 0.5 and 5 mM. The samples were incubated for 2 h and then extracted with MTBE and HCI and analysed for released lauric acid using capillary GC. By comparing the samples containing potential inhibitory compounds with control samples with enzyme and substrate only, the inhibition (%) was calculated. Table 4 gives the result for selected zinc chelating compounds. The same assay was also made either with purified enzyme from the wild-type strain (see example 3) or with extracts from E. coli Top 10/pBADgIII AMRE induced with arabinose (see example 6). Furthermore, the same assay was made using stationary phase living cells of Ax20 instead of an isolated enzyme preparation. In this case successful uptake of the inhibitors into the cells and inhibition are measured simultaneously.
Potential inhibitory compounds were dissolved in Buffer A and aliquots of the solution of different inhibitors (10 μl) were distributed to individual wells of a white microtitier plate. Purified enzyme obtained from the strain E. coli Top 10/pBADgIII AMRE was diluted in Buffer A (200 pg/ml final concentration) and added to the inhibitory compounds. After 10 min preincubation, the substrate (Na-lauroyl-L-glutamine) was added to the individual wells to a final concentration of 0.05 mM. After 15 min of incubation, the amino-group of the released L-glutamine was derivatised by adding to each well of the microtiter plat 50 μl of a fluorescamine stock solution (2.5 mM in acetonitrile; fluorescamine obtained from Fluka, Burchs, Switzerland). After 5 min the fluorescence in the wells of the microtiter plates was measured with an excitation wavelength of 360 nm and an emission wavelength of 460 nm. The fluorescence of control wells with enzyme, substrate and DMSO only was then compared to the fluorescence in wells containing potential inhibitors. By varying the inhibitor concentration, the IC50 value for each compound was determined, and the Ki values were calculated.
The following description is made with reference to Scheme 1 in
In a synthesis based on Fisher, S. R. W.; Justus Liebigs Ann. Chem., 1957, 357, (0.165 mol) of the corresponding D-α-aminoacid are solubilised in 165 mL HBr 48% and 150 mL water. The reaction mixture is cooled to 0° C. and a solution of NaNO2 (18.3 g, 1.6 eq) in 60 mL water is added dropwise. The mixture is stirred for 2.5 h at room temperature, then concentrated to remove the acid vapour, extracted with Et2O four times. The organic layers are washed with water, NaCl sat., dried over Na2SO4, and concentrated under reduced pressure yielded compound 1 as oil used without further purification.
1a, R: PhCH2: Yield 100%
Rf: 0.43 (CH2Cl2/MeOH/AA 9/1/0.2)
1H NMR (CDCl3 270 MHz): 7.3 (m, 5H), 4.3 (t, 1H), 3.1-3.5 (m, 2H).
1b, R: iBu: Yield 92.6%
Rf: 0.50 (CH2Cl2/MeOH/AA 9/1/0.5)
1H NMR (CDCl3 270 MHz); 4.35 (t, 1H), 2.0 (t, 2H), 1.8 (m, 1H), 1.0 (m, 6H)
1c, R.: nBu: Yield: 100%
Rf: 0.48 (CH2Cl2/MeOH/AA 9/1/0.5)
1H NMR (CDCl3 270 MHz): 4.3 (t, 1H), 2.1-1.8 (m, 2H), 1.5 (m, 4H), 0.9 (t, 3H).
Compound 1 (0.165 mol) solubilised in 165 mL NaOH 1N (1 eq) is cooled at 0° C. Potassium thioacetate (22.65 g, 0.198 mol, 1.2 eq) in 60 mL H2O is added dropwise and the reaction mixture is stirred for 16 h at room temperature. The preparation is acidified by addition of HCl 1N (pH 1-2) then extracted with AcOEt three times. The organic layers are washed with water, NaCl sat., dried over Na2SO4, and concentrated under reduced pressure yielded compound 2 as orange oil used without further purification.
2a, R: PhCH2: Yield 96.0%
Rf: 0.43 (Cyclohexane/AcOEt/AA 5/5/0.1)
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 40-60 Rt=8.93 min
1H NMR (CDCl3 270 MHz): 7.3 (m, 5H), 4.3 (t, 1H), 3.1-3.5 (m, 2H), 2.2 (s, 3H).
2b, R: iBu: Yield 91.0%
1H NMR (CDCl3270 MHz): 4.2 (t, 1H), 2.4 (s, 3H), 1.9-1.5 (m, 4H), 0.9 (m, 6H)
2c, R: nBu: Yield: 94.5%
1H NMR (CDCl3 270 MHz): 4.1 (t, IH), 2.3 (s, 3H), 1.9 (m, 1H), 1.65 (m, 1H), 1.3 (m, 4H), 0.9 (t, 3H).
Compound 2 (2.607 mmol), (S)-Glutamine tert-butyl ester hydrochloride (1.2 eq, 746 mg), EDCI (1.2 eq, 929 mg), HOBt (1.2 eq, 479 mg), Et3N (1.2 eq, 438 μL) are stirred overnight in 10 mL THF/CHCl3. The reaction mixture is concentrated under reduced pressure and diluted in H2O/AcOEt. The organic layer is washed with NaHCO3 sat. (2×), citric acid 10% (2×), NaCl sat., dried over Na2SO4, and concentrated.
The crude product is purified by HPLC Kromasil C18 5μ100A, 250×20 mm (CH3CN/H2O 0.05% TFA 40-60) yielded compound 3 as a solid.
3a, R: PhCH2: Yield 32.4%, wt: 343 mg.
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 50-50 Rt=7.88 min
1H NMR (CDCl3 270 MHz): 7.3-7.2 (m, 5H), 4.4 (m, 1H), 4.3 (t, 1H), 3.2 (dd, 1H), 2.8 (dd, 1H), 2.2 (s, 3H), 2.1 (m, 2H), 1.8 (m, 2H), 1.4 (s, 9H).
3b, R: iBu: Yield 74.3%, wt: 352 mg.
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 50-50 Rt=6.48 min
1H NMR (CDCl3 270 MHz): 6.8 (d, 1H), 4.4 (m, 1H), 4.15 (t, 1H, 2.4 (s, 3H), 2-1.5 (m, 7H), 1.4 (s, 9H, 0.9 (m, 6H)
3c, R: nBu: Yield: 80.7%, wt: 307 mg.
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O(0.05% TFA) 60-40 Rt=6.75 min
1H NMR (CDCl3 270 MHz): 6.8 (d, 1H), 4.4 (m, 1H), 4.1 (t, 1H), 2.4 (s, 3H, 2.2-1.5 (m, 10H), 1.4 (s, 91-1), 0.9 (t, 3H).
Compound 3 (0.58 mmol) is solubilized in 3 mL CH2Cl2 and 3 mL TFA are added at 0° C. The reaction mixture is stirred for 3 h at room temperature. The solvent and excess reagent are eliminated under reduced pressure. The crude product is coevaporated 2 times with cyclohexane yielded compound 4 as oil used without further purification.
4a, R: PhCH2: Yield 100%, wt: 206 mg.
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 30-70 Rt=8.67 min
1H NMR (DMSO+TFA 270 MHz): 8.5 (d, 1H), 7.2 (m, 5H), 4.4 (t, 1H), 4.05 (m, 1H), 3.2 (dd, 1H), 2.8 (dd, 1H), 2.2 (s, 3H), 2.1 (t, 2H), 1.9 (m, 1H), 1.8 (m, 1H).
4b, R: iBu: Yield 100%, wt: 299 mg.
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 30-70 Rt=6.36 min
1H NMR (DMSO+TFA 270 MHz): 8.5 (d, 1H), 4.3-4.0 (m, 2H), 2.4 (s, 3H), 2.1 (m, 2H) 1.9 (m, 1H), 1.7 (m, 2H), 1.5 (m, 1H), 1.3 (m, 1H), 0.9 (d, 3H), 0.8 (d, 3H) 4c, R: nBu: Yield: 100%, wt: 261 mg.
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 30-70 Rt=6.75 min
1H NMR (DMSO+TFA 270 MHz): 8.5 (d, 1H), 4.1 (m, 2H), 2.4 (s, 3H), 2.1 (t, 2H), 1.9 (m, 1H), 1.7 (m, 1H), 1.6 (m, 1H), 1.2 (m, 3H), 0.9 (t, 3H)
Compound 4 (0.38 mmol) is solubilized under argon in 2 mL degassed MeOH and 1.16 mL degassed NaOH (3 eq) are added. The reaction mixture is stirred for 2 h at room temperature. HCl N is added to obtain pH=1 and the solvent is eliminated under reduced pressure. The product is extracted with AcOEt. After evaporation the product is solubilized in water and lyophilised to give 5 as a white hygroscopic solid.
5a, R: PhCH2: Yield 76.5%, wt: 91 mg.
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 30-70 Rt=6.65 min SM-ES(+): [M+Na]+=333
1H NMR (DMSO+TFA 270 MHz): 8.5 (d, 1H), 7.2 (m, 5H), 4.1 (m, 1H), 3.6 (q, 1H), 3.1 (dd, 1H), 2.7 (dd, 1H), 2.1 (t, 2H), 1.9 (m, 1H), 1.8 (m, 1H).
5b, R: iBu: Yield 51.3%, wt: 133 mg.
SM-ES(−): [M−H]−=275
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 30-70 Rt=5.36 min
1H NMR (DMSO-TFA 270 MHz): 8.3 (d, 1H), 4.1 (m, 1H), 3.4 (m, 1H), 2.1 (m, 2H), 2.0-1.3 (m, 5H), 0.9 (d, 3H), 0.8 (d, 3H)
5c, R: nBu: Yield: 74.3%, 168 mg.
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 30-70 Rt=5.89 min SM-ES(+): [M+Na]+=299
1H NMR (DMSO+TFA 270 MHz): 8.2 (d, 1H), 4.2 (m, 1H), 3.2 (q, 1H), 2.1 (t, 2H), 1.9 (m, 1H), 1.7 (m, 1H), 1.6 (m, 1H), 1.2 (m, 3H), 0.8 (t, 3H).
This synthesis is described with reference to Scheme 2 of
The synthesis is based on the method of Boyd, E. A.; Regan, A. C.; Tetrahedron Letters, 1994, 24, 4223. In a 100 mL flask equipped with a septum and a condenser, 4.2 g (51.85 mol) ammonium phosphinate and HMDS (8.57 g, 53.08 mmol, 1.02 eq) are heated under N2 at 100-110° C. for 2 h. The reaction mixture is cooled at 0° C. and 50 mL dried CH2Cl2 is added followed by the addition of the bromide derivative (53.08 mmol, 1.02 eq). The mixture is stirred overnight at room temperature.
The precipitate is filtered and the filtrate concentrated under reduced pressure. The crude product is dissolved in CH2Cl2/MeOH. The precipitate is removed and the crude product is eluted on silica gel (CH2Cl2/MeOH/AA 9/1/0.4) yielding compound 6.
6a, R: PhCH2: Yield 43.3%, wt: 3.50 g.
Rf: 0.21 (CH2Cl2/MeOH/AA 9/1/0.4)
1H NMR (DMSO+TFA 270 MHz): 7.2 (m, 5H), 6.9 (d, 1H), 3.1 (dd, 2H) 6b, R: iBu: Yield 32.1%, wt: 2.86 g.
1H NMR (DMSO+TFA 270 MHz): 6.9 (d, 1H), 3.6 (m, 2H), 1.5 (m, 1H), 0.9 (m, 6H) 6c, R: nBu: Yield: 56.9%, wt: 3.60 g.
1H NMR (DMSO+TFA 270 MHz): 6.9 (d, 1H), 1.6 (m, 2H), 1.3 (m, 4H), 0.8 (t, 3H)
This synthesis is based on the method of Boyd, E. A.; Regan, A. C.; Tetrahedron Letters, 1994, 24, 4223. In a 25 mL flask equipped with a septum and a condenser, compound 6a (156 mg, 1 mmol) and HMDS (218 μL, 1.02 eq) are warmed up under N2 at 100-110° C. for 2 h. The reaction mixture is cooled at 0° C. and compound 14 (426 mg, 1.03 mmol) in 5 mL., dried CH2Cl2 is added. The mixture is heated overnight at 60° C.
The reaction mixture is concentrated under reduced pressure. The crude product is purified by HPLC Kromasil C18 5000A, 250×20 mm (CH3CN/H2O 0.05% TFA 60-40) yielded 234 mg compound 7a as a white solid. Yield 41.1%.
HPLC Kromasil C18 5000A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 70-30 Rt=5.99 min
1H NMR (DMSO+TFA 270 MHz): 8.5 (s, 1H), 7.2 (m, 20H), 4.1 (q, 2H), 3.0 (d, 2H), 2.6 (m, 1H), 2.3 (t, 2H), 2.0-1.6 (m, 4H), 1.1 (t, 3H)
Compound 6b or 6c (3.27 mmol) is solubilized in 3 mL CH3CN. Compound 14 (1.35 g, 3.27 mmol) and BSA (4.06 mL, 5 eq) are added and the reaction mixture is stirred 72 h at room temperature under N2. The reaction mixture is concentrated under reduced pressure. The crude product is purified by HPLC Kromasil C18 5μ100A, 250×20 mm (CH3CN/H2O 0.05% TFA 60-40).
7b, R: iBu: Yield 5.3%, wt: 92 mg, white solid.
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 70-30 Rt 5.57 min
1H NMR (DMSO+TFA 270 MHz): 8.6 (s, 1H), 7.2 (m, 15H), 4.0 (q, 2H), 2.6 (m, 1H), 2.2 (t, 2H), 1.9 (m, 2H), 1.7 (m, 3H), 1.5 (m, 2H), 1.1 (t, 3H), 0.9 (d, 6H) 7c, R: nBu: Yield: 8.9%, wt: 155 mg, white solid.
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 60-40 Rt-10.29 min
1H NMR (DMSO+TFA 270 MHz): 7.2 (m, 15H), 6.8 (s, 1H), 4.1 (q, 2H), 2.7 (m, 1H), 2.4-1.4 (m, 12H), 1.2 (t, 3H), 0.9 (d, 3H)
Compound 7 (0.41 mmol) is solubilized in 2 mL EtOH and 2 mL LiOH 1N(5 eq) are added. The reaction mixture is stirred for 2 h at room temperature. HCl 1N is added to obtain pH=1 and EtOH is removed under reduced pressure. The product is extracted by AcOEt. The organic layers are washed with NaCl sat., dried over Na2SO4 yielding compound 8 as oils.
8a, R: PhCH2: Yield 95.0%, wt: 211 mg.
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 40-60 Rt=7.70 min
1H NMR (DMSO+TFA 270 MHz): 8.5 (s, 1H), 7.2 (m, 20H), 3.0 (dd, 2H), 2.5 (m, 1H), 2.3-1.6 (m, 6H) 8b, R: iBu: Yield 97.6%, wt: 81 mg.
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 60-40 Rt=5.46 min
1H NMR (DMSO+TFA 270 MHz): 8.6 (s, 1H), 7.2 (m, 15H), 2.6 (m, 1H), 2.2 (m, 2H), 1.9 (m, 2H), 1.7 (m, 3H), 1.5 (m, 2H), 0.9 (d, 6H) 8c, R: nBu: Yield: 69.2%, wt: 101 mg.
HPLC Kromasil C18 5/μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 70-30 Rt=3.92 min
1H NMR (DMSO+TFA 270 MHz): 8.6 (s, 1H), 7.2 (m, 15H), 2.7 (m, 1H), 2.0-1.0 (m, 12H), 0.8 (d, 3H)
Compound 8 (0.197 mmol) is solubilized in 4 mL TFA in presence of 90 μL iPr3SiH. The reaction mixture is stirred 2 h at room temperature. Excess TFA is removed under reduced pressure and the reaction mixture is co-evaporated with cyclohexane (2×). The crude product is purified by HPLC Kromasil C18 5μ100A, 250×20 mm (CH3CN/H2O 0.05% TFA 30-70) yielding compound 9.
9a, R: PhCH2: Yield 88.1%, wt: 52 mg, oily product.
SM-ES(+): [M+H]+=300
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 50-50 Rt=2.34 min
1H NMR (DMSO+TFA 270 MHz): 7.2 (m, 5H), 3.0 (d, 2H), 2.5 (m, 1H), 2.0-1.6 (m, 6H) 9b, R: iBu: Yield 71.5%, wt: 30 mg, oily product.
SM-ES(−): [M−H]−=264
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 60-40 Rt=2.36 min
1H NMR (DMSO+TFA 270 MHz): 2.6 (m, 1H), 2.0-1.5 (m, 9H), 0.9 (d, 6H)
9c, R: nBu: Yield: 98.0%, wt: 51 mg, oily product.
SM-ES(−): [M−H]−=264
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 70-30 Rt=3.92 min
1H NMR (DMSO+TFA 270 MHz): 2.5 (m, 1H), 2.1-1.1 (m, 12H), 0.8 (d, 3H).
This synthesis is described with reference to Scheme 3 of
In a method based on Prabhu, K. R.; Pillarsetty, N.; Gali, H.; Katti, K. V.; J. Am. Chem. Soc., 2000, 122, 1554, a mixture of diethylmalonate (11.12 g, 10:55 mL, 69.46 mmol), tert-Butylacrylate (10.17 mL, 69.46 mmol, 1 eq), K2CO3 (9.60 g, 1 eq), nBu4NHSO4 (258 mg 0.01 eq) in 40 mL toluene are heated under reflux during 16 h. The reaction mixture is filtered, concentrated under vacuum yielded 19.6 g compound 10 as oil used without further purification.
Yield: 98.0%
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 70-30 Rt=8.72 min
1H NMR (CDCl3 270 MHz): 4.1 (q, 4H), 3.3 (t, 1H), 2.2 (m, 2H), 2.05 (m, 2H), 1.3 (s, 9H), 1.1 (m, 6H).
To a solution of compound 10 (19.6 g, 68.05 mmol), in 400 mL CH2Cl2 is added 400 mL of TFA. The mixture is stirred under during 48 h at room temperature. The reaction mixture is concentrated under vacuum, coevaporated two times with cyclohexane to eliminate excess TFA yielded 15.8 g compound 11 as oil used without further purification.
Yield: 100.0%
1H NMR (CDCl3 270 MHz): 8.7 (s, 1H), 4.2 (q, 4H), 3.4 (t, 1H), 2.5 (m, 2H), 2.1 (m, 2H), 1.2 (m, 6H).
In a method based on Haynes, R. K.; Starling, S. M.; Vonwiller, S. C.; J. Org. Chem., 1995, 60, 4690, compound 11 (15.79 g, 68.10 mmol) in 12 mL thionyl chloride is heated under reflux during 1 h. The reaction mixture is concentrated under vacuum, dissolved in 20 mL CH2Cl2, then a solution of trityl amine (28.3 g 88.52 mmol) and Et3N in 20 mL CH2Cl2 is added dropwise. The reaction mixture is stirred for 48 h at room temperature.
The reaction is stopped by addition of saturated solution of K2CO3 and the desired product extracted by Et2O.
The organic layer is washed with K2CO3 sat., HCl 2M, dried over Na2SO4, and concentrated under reduced pressure. The crude product is eluted on silica gel (elution CHex/AcOEt 6/4) yielded 20.9 g of the desired compound 12 as a white solid.
Yield: 65.0%
Mp: 102-104° C.
TLC (CHex/AcOEt 6/4) Rf:0.56
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 70-30 Rt=12.45 min
1H NMR (CDCl3 270 MHz): 7.4-7.1 (m, 15H), 6.6 (s, 1H), 4.15 (q, 4H), 3.4 (t, 1H), 2.35 (t, 2H), 2.1 (q, 2H), 1.3 (t, 6H).
To a solution of compound 12 (20.93 g, 44.41 mmol) in 80 mL EtOH at 0° C. is added KOH (2.53 g 1.025 eq) in 100 mL EtOH. The reaction mixture is stirred for 48 h at 4° C. The reaction mixture is concentrated under reduced pressure. The mixture is dissolved in water, extracted by Et2O. The aqueous layer is acidified with HCl 3M. The precipitate is filtered, dried, given 16.4 g compound 13 as a white solid.
Yield: 65.0%
Mp: 122-124° C.
TLC (CHex/AcOEt 6/4) Rf:0.56
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 70-30 Rt 12.45 min
1H NMR (CDCl3 270 MHz): 7.4-7.1 (m, 15H), 6.6 (s, 1H), 4.15 (q, 2H), 3.4 (t, 1H), 2.35 (t, 2H), 2.1 (q, 2H), 1.3 (t, 3H).
Et2NH (3.80 mL, 36.85 mmol), 37% sol. Formaldehyde (4.5 mL, 1.5 eq) are mixed with compound 13 (16.4 g 36.85 mmol) and stirred 48 h at room temperature. The reaction mixture is taken up with 210 mL of a mixture H2O/Et2O. The aqueous layer is extracted two times with Et2O. The organic layers are washed with citric acid 10%, H2O, NaHCO3 sat., NaCl sat., dried over Na2SO4, and concentrated under reduced pressure yielded compound 14 (11.71 g) as a white solid.
Yield: 79.6%
Mp: 120-122° C.
HPLC Kromasil C18 5μ100A, 250×4.6 mm, CH3CN—H2O (0.05% TFA) 70-30 Rt=11.81 min
1H NMR (CDCl3 270 MHz): 7.4-7.1 (m, 15H), 6.6 (s, 1H), 6.1 (s, 1H), 5.6 (s, 1H), 4.15 (q, 2H), 2.6 (t, 2H), 2.4 (t, 2H), 1.3 (t, 3H).
| Number | Date | Country | Kind |
|---|---|---|---|
| 01111637.3 | May 2001 | EP | regional |
| Number | Date | Country | |
|---|---|---|---|
| Parent | 10477858 | Jun 2004 | US |
| Child | 11746401 | US |
