Patent Application
20120027844
Some aspects of the invention relate to compounds, their methods of syntheses, their compositions, and their uses to treat cancer, including but not limited to, breast cancer, kidney cancer, colon cancer, rectal cancer, ovarian cancer, stomach cancer, uterine cancer, carcinoma in situ, and leukemia.
Some research may suggest that pathogenic alterations in endogenous ceramide levels contribute to cancer (e.g., breast cancer) chemoresistance. The bioactive sphingolipid ceramide may be a therapeutic target because it can be involved in the regulation of cellular apoptosis and survival. Several chemotherapeutic agents, including paclitaxol and doxorubicin, can induce apoptosis through induction of ceramide signaling. In fact, decreased synthesis and increased metabolism of the apoptotic sphingolipid ceramide can be a mechanism of chemoresistance in human breast cancer.
Treatment options for cancer can include one or more of surgical intervention, chemotherapy, radiation therapy, and adjuvant systematic therapies. Adjuvants may include but are not limited to chemotherapy, radiation therapy, and endocrine therapies, such as administration of LHRH agonists; antiestrogens, such as tamoxifen; high-dose progestogens; aromatase inhibitors; and/or adrenalectomy.
In recent years, the development of targeted molecular therapeutics has become increasingly based upon the identification of the precise molecular abnormalities that are responsible for malignant progression in human cancers. The identification and molecular characterization of signaling pathways responsible for abnormal growth, inhibition of apoptosis, cellular invasion and metastasis, and angiogenesis have generated some targets for new anticancer drugs. Therapy with tamoxifen and aromatase inhibitors has been a successful targeted therapy for decades. Anthracyclines and taxanes can be (individually or together) part of chemotherapy.
The monoclonal antibody trastuzumab is one example of a targeted therapy for breast cancer. Trastuzumab can be used to treat breast cancers that overproduce a protein called human epidermal growth factor receptor 2 or HER2. This protein is overproduced in about 20% of breast cancers. These HER2-overproducing cancers tend to be more aggressive and are more likely to recur. Trastuzumab targets the HER2 protein, and this antibody, in conjunction with adjuvant chemotherapy, can lower the risk of HER2-overproducing breast cancer recurrence by 50% compared to chemotherapy alone. Clinical trials have demonstrated trastuzumab as an important component of some first-line treatments. In particular, the combination with taxanes and vinorelbine has been established. The addition of trastuzumab to chemotherapy can improve disease-free and overall survival.
Chemotherapy can be used as a single-agent or as a combination, possibly with new targeted therapies where relevant. Resistance to chemotherapeutic agents can be an obstacle to successful management of patients with cancer. Some agents become increasingly ineffective in progressive disease and tumors are then deemed to be drug resistant.
While certain features of this invention shown and described below are pointed out in the claims, the invention is not intended to be limited to the details specified, since a person of ordinary skill in the relevant art will understand that various omissions, modifications, substitutions and changes in the forms and details of the invention illustrated and in its operation may be made without departing in any way from the spirit of the present invention. No feature of the invention is critical or essential unless it is expressly stated as being “critical” or “essential.”
According to some embodiments of the present invention, compounds for Formula (I) and Formula (II), as described herein, are provided. In some instances, the IC50 of a compound against a cancer cell determined by a clonogenic survival assay is not greater than about 20 μM.
In accordance with other embodiments of the present invention, a composition comprising a compound is described. The composition may be a pharmaceutical composition and in some instances also comprises a liposome.
In accordance with another set of embodiments of the present invention, syntheses of the compounds are provided and, in some instances, include condensation of certain starting materials or intermediates with aldehydes or carboxylic acids.
In accordance with other embodiments of the invention, methods for treating cancer by administering a compound to an animal (such as a human) are described. In some instances, the cancer is breast cancer. In exemplary embodiments, the compound interferes with ceramidase in the one or more cancer cells.
Other embodiments of the present invention will be apparent in light of the description of the invention provided herein.
The following drawings form part of the present specification and are included to further demonstrate certain aspects of the present invention. The invention may be better understood by reference to one or more of these drawings in combination with the description of specific embodiments presented herein.
Some embodiments of the invention include compounds chosen from:
R1 can be selected from:
n can be 1, 2, or 3. The moiety A1 can be at the 2-, 3-, or 4-position of the ring, and can be —H, —NO2, —CH3, —CH2CH3, —CH2CH2CH3, —CHCH3CH3, —Cl, —Br, —I, —OCH3, —OCH2CH3, —CN, acyl groups, or —OH.
R2 can be selected from:
m can be 1, 2, or 3. A2 and A3 can be the same or different, can be at the 2-, 3-, 4-, 5-, or 6-position of the ring, and can be selected from —H, —NO2, —CH3, —CH2CH3, —CH2CH2CH3, —CHCH3CH3, —Cl, —Br, —I, —OCH3, —OCH2CH3, —CN, acyl groups, or —OH. In some embodiments, A2 is in the 2-position and A3 is in the 6-position. In still other embodiments, A2 is in the 2-position and A3 is in the 6-position, and A2 and A3 are chosen from electron withdrawing groups including but not limited to —NO2, —Cl, —Br, —I, —OCH3, —OCH2CH3, —CN, acyl groups, or —OH. In other embodiments, A2 and A3 are not in the 3- or 5-position.
An acyl group can be chosen from, but is not limited to, —C(O)CH3, —C(O)CH2CH3, —C(O)(CH2)2CH3, and —C(O)(CH2)3CH3.
In some exemplary embodiments, the compound is chosen from:
Some embodiments of the invention include compounds of Formula (I) or Formula (II) in the form of free bases, salts, optical isomers, geometric isomers, salts of isomers, and derivatives. Such salts include uncharged molecules, components of molecular complexes, or non-irritating pharmacologically acceptable salts, e.g. the hydrochloride, hydrobromide, sulfate, phosphate, nitrate, borate, acetate, maleate, tartrate, salicylate, etc. For acidic compounds, salts include metals, amines, or organic cations (e.g. quaternary ammonium salts). Furthermore, derivatives of the compounds (such as ethers, esters, amides, etc.) include those which have desirable retention and release characteristics but which are easily hydrolyzed by body pH, enzymes, etc.
In some embodiments, the compounds incorporate an amide functional group in the long carbon chain. The presence of this amide functional group can, in some instances, modify polarity. The carbon chain length can be kept approximately the same as the known ceramides in order to keep the optimum lipid solubility and facility of passage through membranes. Other structural variations include, but are not limited to, the presence and absence of the original carbonyl group and different sizes and shapes of the substituents on the original nitrogen. In some instances, ceramide can be modified to prevent degradation into sphingosine by modifying the amide group where the ceramidase-catalyzed hydrolysis reaction can occur; for example, the presence of an imine group, as exemplified in compounds I-3, II-3, and II-7 to II-21, appears to reduce or prevent hydrolysis by ceramidase.
Some compounds of Formula (I) and (II) can inhibit growth of MCF-7, MDA-MB-231, and MCF7-TN-R human breast cancer cells in an in vitro model as exemplified by MTT viability assays and clonogenic survival assays. More generally, some compounds of Formula (I) and (II) can interfere with ceramidase, for example, by blocking sphingosine production or preventing ceramide analog depletion.
The IC50 for some compounds used in the MTT viability assay with MCF-7, MDA-MB-231, or MCF7-TN-R human breast cancer cells can be not greater than about 0.1 μM, not greater than about 0.5 μM, not greater than about 1.0 μM, not greater than about 5.0 μM, not greater than about 10 μM, not greater than about 20 μM, at least about 0.001 μM, at least about 0.01 μM, at least about 0.1 μM, or at least about 1.0 μM.
The IC50 for some compounds used in the clonogenic survival assay with MCF-7, MDA-MB-231, or MCF7-TN-R human breast cancer cells can be not greater than about 0.1 μM, not greater than about 0.5 μM, not greater than about 1.0 μM, not greater than about 5.0 μM, not greater than about 10 μM, not greater than about 20 μM, at least about 0.001 μM, at least about 0.01 μM, at least about 0.1 μM, or at least about 1.0 μM.
For some compounds the selectivity to inhibit cell growth of cancer cells compared to normal breast epithelial cells can be determined by the ratio of IC50 from proliferation assays of normal cells (e.g, MCF10A) to the cancer cells (e.g., MCF-7, MDA-MB-231, or MCF7-TN-R). This ratio (i.e., IC50 of normal cells divided by IC50 of cancel cells) can be at least about 25, at least about 50, at least about 100, at least about 200, at least about 500, not greater than 250, not greater than 750, or not greater than 1000.
Some embodiments of this invention include the syntheses of compounds. Syntheses can include condensation of one or more starting compounds (or intermediates) with, for example, aldehydes or carboxylic acids. In some instances, the short chain ceramide D-erythro N-octanoyl sphingosine, also known as C8-ceramide, can be used to synthesize some of compounds. Other starting compounds (or intermediates) can include
such as sphingosine, and
such as (S)-2-amino-3-hydroxy-N-tetradecylpropanamide. Here, n and m can be the same or different and can be 1, 2, or 3.
In some embodiments, syntheses of the compounds can include two or more strategies to modify the ceramide structure. In one strategy, cycloalkyl groups or branched alkyl groups can be introduced as substituents on the amide group; this can, in some instances, replace the flexible heptyl chain to enhance the rigidity and steric hindrance and shield this hydrolysis site. In another strategy, the amide functional group can be replaced with an amine functional group or an imine functional group; in some cases, this can prevent amide hydrolysis by the enzyme ceramidase.
In some syntheses, after condensation, reduction can be used to, for example, saturate one or more double bonds. This reduction can occur, in some instances, using NaBH3CN.
In some embodiments, compounds can be synthesized according to Scheme A, which exemplifies the synthesis of I-1 to I-4.
In some embodiments, the compounds can be synthesized according to the Scheme B, which exemplifies the synthesis of II-1 to II-4.
In scheme B, the following reaction conditions can be used: i) DCC/HOST in THF 0° C.; ii) TFA/CH2Cl2 (0° C.), and NaCO3/Ethyl acetate; iii) DCC/HOBT in THF 0° C., and cyclohexanecarboxylic acid (for compound II-1) or pivalic acid (for compound II-4); iv) NaOH/benzaldehyde in methanol; v) NaBH3CN/methanol.
The compounds of Formula (I) and Formula (II) can be administered to animals by any number of administration routes or formulations. The compounds can also be used to treat animals for a variety of diseases. Animals include but are not limited to canine, bovine, porcine, avian, mammalian, and human.
Diseases that can be treated using the compounds include, but are not limited to cancers, such as cancerous tumors. Cancers that can be treated include breast cancer, kidney cancer, colon cancer, rectal cancer, ovarian cancer, stomach cancer, uterine cancer, carcinoma in situ, and leukemia. Other cancers that can be treated include cancers that interfere with ceramidase, for example, by blocking sphingosine production or preventing ceramide analog depletion. In some embodiments, the compounds of Formula (I) and (II) can be useful therapy against chemosensitive cancers or chemoresistant cancers, including breast cancer.
As used herein, the term “breast cancer” refers to any cancer having its origin in breast cells, and includes metastatic and local forms of breast cancer. The term “minimize” or “reduce,” or a derivative thereof, includes a complete or partial inhibition of a specified biological effect (which is apparent from the context in which the term minimize is used).
Treatment can also include one or more of surgical intervention, chemotherapy, radiation therapy, and adjuvant systematic therapies. Adjuvants may include but are not limited to chemotherapy, radiation therapy, and endocrine therapies, such as administration of LHRH agonists; antiestrogens, such as tamoxifen; high-dose progestogens; aromatase inhibitors; and/or adrenalectomy. Chemotherapy can be used as a single-agent or as a combination with known or new therapies.
The route of administration of the compounds may be of any suitable route such as that which provides a concentration in the blood corresponding to a therapeutic concentration. Administration routes that can be used, but are not limited to the oral route, the parenteral route, the cutaneous route, the nasal route, the rectal route, the vaginal route and the ocular route. The choice of administration route can depend on the compound identity, such as the physical and chemical properties of the compound, as well as the age and weight of the animal, the particular disease and the severity of the disease. Of course, combinations of administration routes can be administered, as desired.
One or more compounds of Formula (I) and Formula (II) can be part of a composition and can be in an amount from about 1% to about 95% by weight of the total composition (or from about 10% to about 90%, or from about 25% to about 75%).
One or more compounds of Formula (I) and Formula (II) can also be part of a liposome delivery system such as those described in Boddapati et al., Nano Lett., Vol. 8, No. 8, pp. 2559-2563 (2008) and Boddapati et al., J. Liposome Research, Vol. 15, pp. 49-58 (2005). In some instances, the liposome delivery system can include nanocarriers which can be modified to improve the efficiency or provide targeting (e.g., to specific organs or subcellular structures, such as mitochondria) of drug delivery. Such modifications include but are not limited to conjugation of triphenylphosphonium to lipids (such as a stearyl portion of a lipid or other portions of phospholipids) which are then incorporated into lipid bilayers.
One or more compounds of Formula (I) and Formula (II) can be part of a pharmaceutical composition and can be in an amount from about 1% to about 95% by weight of the total composition (or from about 10% to about 90%, or from about 25% to about 75%). The composition can be presented in a dosage form which is suitable for the oral, parenteral, rectal, cutaneous, nasal, vaginal, or ocular administration route. The composition can be of the form of, for example, tablets, capsules, pills, powders granulates, suspensions, emulsions, solutions, gels (including hydrogels), pastes, ointments, creams, plasters, drenches, delivery devices, suppositories, enemas, injectables, implants, sprays, aerosols or other suitable forms.
Pharmaceutical compositions can be formulated to release the active compound substantially immediately upon the administration or any substantially predetermined time or time after administration. Such formulations can include, for example, controlled release formulations such as various controlled release compositions and coatings.
Other formulations include those incorporating the drug (or control release formulation) into food, food stuffs, feed, or drink.
All synthesis chemicals and solvents were purchased from Sigma-Aldrich Company except D-sphingosine/HCl which was purchased from CNH Technologies Inc. All coupling reactions were carried out under anhydrous conditions. The purities of the intermediates and the products were confirmed by HPLC (hp HEWLETT PACKARD SERIES 1050, phenomenex Gemini-NX 5u Cl 8 110A) and thin layer chromatography (Whatman 250 μm) LAYER, UV254, Flexible plates for TLC and SILICA GEL IB2-F). Chromatography was performed on HPTLC Silica gel 60 F254. 1H NMR and 13C NMR spectra were obtained on a Varian 300 MHz NMR spectrometer. Mass spectral data was determined using an Agilent 6890N Network GC System with 5975C inert MSD. Elemental analysis was performed by Atlantic Microlab Inc.
N-((2S,3R,E)-1,3-dihydroxyoctadec-4-en-2-yl)cyclohexanecarboxamide (Compound I-1) was synthesized by adding 40 mg (0.29 mmol) of tert-butyl alcohol (HOBt) and 100 mg (0.29 mmol) of D-sphingosine/HCl at 0° C. to the solution of 38 mg (0.29 mmol) of cyclohexanecarboxylic acid in 25 mL of anhydrous tetrahydrofuran (THF). After 5 min, 67 mg (0.33 mmol) of dicyclohexylcarbodiimide (DCC) was added, and the pH of the solution was adjusted to 8 with 4-methylmorpholine. The reaction mixture was stirred at 0° C. for 2 h and at room temperature overnight. On evaporation the residue was dissolved in 100 mL of ethyl acetate. The solution was washed successively with saturated sodium bicarbonate, 5% potassium bisulfate, and saturated sodium chloride, and the organic phase was separated and dried over anhydrous magnesium sulfate for 2 h. After filtration and evaporation under reduced pressure, the crude product was recrystallized in ethyl ether to obtain 60 mg (51%) of N-((2S,3R,E)-1,3-dihydroxyoctadec-4-en-2-yl)cyclohexanecarboxamide as colorless powder. GC/MS (m/e): 391 [M+H2O]+. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=7.224 (d, J=8.4 Hz, 1H), 5.513 (dt, J=15.3 Hz, J=6.6 Hz, 1H), 5.345 (dd, J=15.3 Hz, J=6.6 Hz, 1H), 4.789 (d, J=5.1 Hz, 1H), 4.422 (t, J=5.4 Hz, 1H), 3.872 (q, J=6.0 Hz, 1H), 3.636 (m, 1H), 3.446 (m, 2H), 2.088 (m, 1H), 1.917 (m, 2H), 1.652 (m, 6H), 1.225-1.157 (m, 26H), 0.843 (t, J=6.6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=132.083, 131.506, 72.063, 61.298, 55.665, 44.657, 32.358, 31.979, 30.172, 29.732, 29.656, 29.382, 29.246, 26.194, 26.042, 22.778, 14.624. Anal. Calcd for C25H47NO3: C, 73.30; H, 11.56; N, 3.42; O, 11.72. Found: C, 72.99; H, 11.64; N, 3.74; O, 11.91.
To synthesize (2S,3R,E)-2-(benzylamino)octadec-4-ene-1,3-diol (Compound I-2), 20 mg (0.32 mmol) of sodium cyanoborohydride (NaBH3CN) was added to the solution of 80 mg (0.21 mmol) (2S,3R,E)-2-((E)-benzylideneamino)octadec-4-ene-1,3-diol in 10 mL of methanol. The reaction mixture was stirred at room temperature for 10 h, and evaporated under vacuum. The residue was purified by thin layer chromatography to give 30 mg (36%) of (2S,3R,E)-2-(benzylamino)octadec-4-ene-1,3-diol as colorless powder. GC/MS (m/e): 388 [M+H]+, 372 [M+.OH]+, 358 [M−[.CH2═OH]]+. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=7.323˜7.193 (m, 5H), 5.507 (m, 2H), 4.602 (d, J=3.6 Hz, 1H), 4.311 (br, 1H), 4.004 (m, 1H), 3.750 (s, 2H), 3.400 (m, 1H), 3.292 (m, 1H), 2.459 (m, 1H), 1.962 (m, 2H), 1.218 (m, 22H), 0.840 (t, J=6.6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=132.113, 131.126, 128.727, 128.591, 127.163, 71.881, 63.894, 61.116, 51.960, 32.419, 31.964, 29.717, 29.382, 29.200, 22.778, 14.624. Anal. Calcd for C25H43NO2: C, 77.07; H, 11.12; N, 3.60; O, 8.21. Found: C, 75.79; H, 11.26; N, 3.55; O, 8.20.
To synthesize (2S,3R,E)-2-((E)-benzylideneamino)octadec-4-ene-1,3-diol (Compound I-3), a solution of 100 mg (0.29 mmol) of D-sphingosine/HCl, 11.6 mg (0.29 mmol) of sodium hydroxide (NaOH), 0.05 mL of benzaldehyde in 10 mL of methanol was stirred at room temperature. After 1 hour, the solution was evaporated under reduced pressure, and the residue was washed with cooled methanol to yield 80 mg (71%) of (2S,3R,E)-2-((E)-benzylideneamino)octadec-4-ene-1,3-diol as colorless powder. GC/MS (m/e): 387 M+, 370 [M+.OH]+, 356 [M+[.CH2═OH]]+. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.189 (s, 1H), 7.709 (t, J=3.6 Hz, 2H), 7.409 (m, 3H), 5.431 (m, 2H), 4.781 (d, J=4.2 Hz, 1H), 4.431 (br, 1H), 4.059 (m, 1H), 3.759 (m, 1H), 3.408 (m, 1H), 3.162 (m, 1H), 1.907 (m, 2H), 1.221˜1.119 (m, 22H), 0.838 (t, J=6.6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=161.523, 137.063, 132.341, 131.354, 130.959, 129.092, 128.621, 78.501, 72.792, 63.105, 32.358, 31.994, 29.747, 29.717, 29.625, 29.565, 29.474, 29.413, 29.033, 22.793, 14.624. Anal. Calcd for C25H41NO2: C, 77.47; H, 10.66; N, 3.61; O, 8.26. Found: C, 76.84; H, 10.82; N, 3.75; O, 8.75.
To synthesize N-((2S,3R,E)-1,3-dihydroxyoctadec-4-en-2-yl)pivalamide (Compound I-4), 40 mg (0.29 mmol) of HOBt and 100 mg (0.29 mmol) of D-sphingosine/HCl were added at 0° C. to the solution of 30 mg (0.29 mmol) of pivalic acid in 25 mL of anhydrous THF. After 5 min, 67 mg (0.33 mmol) of DCC was added, and the pH of the solution was adjusted to 8 with 4-methylmorpholine. The reaction mixture was stirred at 0° C. for 2 h and at room temperature overnight. On evaporation the residue was dissolved in 100 ml of ethyl acetate. The solution was washed successively with saturated sodium bicarbonate, 5% potassium bisulfate, and saturated sodium chloride and the organic phase was separated and dried over anhydrous magnesium sulfate for 2 h. After filtration and evaporation under reduced pressure, the residue was purified by thin layer chromatography (chloroform/methanol 10/1) to obtain 0.50 g (45%) of N-((2S,3R,E)-1,3-dihydroxyoctadec-4-en-2-yl)pivalamide as colorless powder. GC/MS (m/e): 382 [M+H]+, 366 [M+.OH]+, 352 [M+[.CH2═OH]]+. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=6.708 (d, J=8.7 Hz, 1H), 5.513 (dt, J=15.3 Hz, J=6.3 Hz, 1H), 5.340 (dd, J=15.3 Hz, J=6.3 Hz, 1H), 4.819 (d, J=5.4 Hz, 1H), 4.444 (t, J=5.7 Hz, 1H), 3.926 (q, J=6.0 Hz, 1H), 3.643 (m, 1H), 3.493 (m, 2H), 1.916 (m, 2H), 1.224 (m, 22H), 1.052 (s, 9H), 0.843 (t, J=6.6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=132.128, 131.445, 72.002, 61.237, 55.802, 32.328, 31.964, 29.717, 29.625, 29.382, 28.046, 22.778, 14.639. Anal. Calcd for C23H45NO3: C, 72.01; H, 11.82; N, 3.65; O, 12.51. Found: C, 72.12; H, 11.65; N, 3.66; O, 12.80.
To synthesize (S)-tert-butyl 3-hydroxy-1-oxo-1-(tetradecylamino)propan-2-ylcarbamate (an intermediate), 1.32 g (9.76 mmol) of 1-hydroxybenzotriazole hydrate (HOBt) was added at 0° C. to the solution of 2.00 g (9.76 mmol) of N-Boc-L-serine in 60 ml of anhydrous tetrahydrofuran (THF dried over calcium chloride). The pH of the solution was adjusted to 8-9 with 4-methylmorpholine. After five minutes of stirring, 2.21 g (10.74 mmol) of N,N′-dicyclohexylcarbodiimide (DCC) was added. The solution of 2.08 g (9.76 mmol) of tetradecylamine in 3 mL of anhydrous THF was added to the solution of N-Boc-L-serine and the reaction mixture was stirred at 0° C. for two hours, and at room temperature overnight. On evaporation the residue was dissolved in 60 ml of ethyl acetate. The solution was washed successively with saturated sodium bicarbonate, 5% potassium bisulfate, and saturated sodium chloride and the organic phase was separated and dried over anhydrous magnesium sulfate for two hours. After filtration and evaporation under reduced pressure 3.57 g (91.5%) of (S)-tert-butyl 3-hydroxy-1-oxo-1-(tetradecylamino)propan-2-ylcarbamate was obtained as powder. 1H NMR (d6-DMSO, 90 MHz) δ/ppm=7.708 (t, J=8.3 Hz, 1H), 6.507 (d, J=11.9 Hz, 1H), 4.765 (t, J=8.3 Hz, 1H), 3.881 (m, 1H), 3.525 (m, 2H), 3.076 (m, 2H), 1.401 (s, 9H), 1.589˜0.740 (m, 36H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.725, 155.784, 78.683, 62.558, 57.548, 39.161, 31.994, 29.732, 29.504, 29.413, 28.790, 26.953, 22.778, 14.548.
To synthesize (S)-2-amino-3-hydroxy-N-tetradecylpropanamide (an intermediate), at 0° C., to the solution of 1.00 g (2.50 mmol) of (S)-tert-butyl 3-hydroxy-1-oxo-1-(tetradecylamino)propan-2-ylcarbamate in 20 mL of dichloromethane (DCM), 3.0 mL of trifluoroacetic acid was added. After four hours of stirring, the solvent was removed under vacuum pressure, and the residue was crystallized in diethyl ether and petroleum ether to give 0.68 g (65.7%) of (S)-2-amino-3-hydroxy-N-tetradecylpropanamide as powder. 1H NMR (d6-DMSO, 90 MHz) δ/ppm=8.358 (t, J=9.1 Hz, 1H), 8.112 (m, 3H), 4.583 (br, 1H), 3.715 (m, 3H), 3.093 (m, 2H), 1.531˜0.677 (m, 27H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=167.141, 61.040, 55.042, 39.449, 31.979, 29.747, 29.701, 29.489, 29.398, 26.968, 22.763, 14.563.
To synthesize (S)-N-(3-hydroxy-1-oxo-1-(tetradecylamino)propan-2-yl)cyclohexanecarboxamide (Compound II-1), at 0° C. to the solution of 0.16 g (1.20 mmol) of cyclohexanecarboxylic acid in THF (20 ml) and DMF (5 mL), 0.16 g (1.20 mmol) of HOBt and 0.50 g (1.20 mmol) of (S)-2-amino-3-hydroxy-N-tetradecylpropanamide were added. After five minutes, 0.30 g (1.45 mmol) of DCC was added, and the pH of the solution was adjusted to 8-9 with 4-methylmorpholine. The reaction mixture was stirred at 0° C. for two hours, and at room temperature overnight. On evaporation the residue was dissolved in 100 ml of ethyl acetate. The solution was washed successively with saturated sodium bicarbonate, 5% potassium bisulfate, and saturated sodium chloride and the organic phase was separated and dried over anhydrous magnesium sulfate for two hours. After filtration and evaporation under reduced pressure 0.40 g (81.3%) of (S)-N-(3-hydroxy-1-oxo-1-(tetradecylamino)propan-2-yl)cyclohexanecarboxamide was obtained as powder. ESI/MS (m/e) 411 [M+H]+. 1H NMR (d6-DMSO, 90 MHz) δ/ppm=7.559 (m, 2H), 4.762 (t, J=8.3 Hz, 1H), 4.195 (m, 1H), 3.495 (m, 3H), 3.020 (m, 2H), 1.912˜0.711 (m, 37H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=175.841, 170.649, 62.452, 55.604, 44.368, 39.145, 34.029, 31.979, 29.884, 29.717, 29.458, 29.382, 26.938, 26.164, 26.012, 25.146, 22.778, 14.609. Anal. Calcd for C24H46N2O3 C, 70.20; H, 11.29; N, 6.82; O, 11.69. Found: C, 69.34; H, 11.25; N, 6.52; O, 12.42.
To synthesize (S)-2-(benzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-3), a mixture of 0.50 g (1.20 mmol) of (S)-2-amino-3-hydroxy-N-tetradecylpropanamide, 0.05 g (1.20 mmol) of NaOH, 0.13 g (1.20 mmol) of benzaldehyde, and 10 mL of methanol was stirred at room temperature for eight hours. The solvent was then evaporated under reduced pressure, and the residue was washed with cooled methanol to yield 0.32 g (68.7%) of (S)-2-(benzylideneamino)-3-hydroxy-N-tetradecylpropanamide as colorless powder. ESI/MS (m/e) 389 [M+H]+. 1H NMR (d6-DMSO, 90 MHz) δ/ppm=8.281 (s, 1H), 7.818 (m, 3H), 7.515 (m, 3H), 4.795 (br, 1H), 3.768 (m, 3H), 3.103 (m, 2H), 1.584˜0.702 (m, 27H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.497, 163.239, 136.532, 131.597, 129.198, 129.061, 76.254, 63.788, 39.039, 31.964, 29.808, 29.701, 29.382, 26.983, 22.763, 14.609. Anal. Calcd for C24H40N2O2 C, 74.18; H, 10.38; N, 7.21; O, 8.23. Found: C, 72.83; H, 10.44; N, 7.14; O, 8.77.
To synthesize (S)-2-(benzylamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-2), to the solution of 0.20 g (0.52 mmol) of (S)-2-(benzylideneamino)-3-hydroxy-N-tetradecylpropanamide in 10 mL of methanol, 32 mg (0.52 mmol) of sodium borohydride (NaBH4) was added. The reaction mixture was stirred at room temperature for ten hours before evaporation under vacuum. The residue was purified by thin layer chromatography to give 115 mg (57.5%) of (S)-2-(benzylamino)-3-hydroxy-N-tetradecylpropanamide as colorless powder. ESI/MS (m/e) 391 [M+H]+. 1H NMR (d6-DMSO, 90 MHz) δ/ppm=7.780 (t, J=8.3 Hz, 1H), 7.304 (m, 5H), 4.726 (br, 1H), 3.790˜2.869 (m, 7H), 1.566˜0.706 (m, 27H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=172.425, 141.041, 128.788, 128.651, 127.361, 64.638, 63.150, 52.097, 38.902, 31.979, 29.853, 29.717, 29.413, 29.382, 27.014, 22.763, 14.609. Anal. Calcd for C24H42N2O2 C, 73.80; H, 10.84; N, 7.17; O, 8.19. Found: C, 71.64; H, 10.63; N, 6.75; O, 9.10.
To synthesize (S)-3-hydroxy-2-pivalamido-N-tetradecylpropanamide (Compound II-4), at 0° C. to the solution of 0.10 g (0.98 mmol) of trimethylacetic acid in THF (60 mL), 0.13 g (0.96 mmol) of HOBt and 0.40 g (0.97 mmol) of (S)-2-amino-3-hydroxy-N-tetradecylpropanamide were added. After five minutes, 0.23 g (1.12 mmol) of DCC was added, and the pH of the solution was adjusted to 8-9 with 4-methylmorpholine. The reaction mixture was stirred at 0° C. for two hours, and at room temperature overnight. On evaporation the residue was dissolved in 100 mL of ethyl acetate. The solution was washed successively with saturated sodium bicarbonate, 5% potassium bisulfate, and saturated sodium chloride and the organic phase was separated and dried over anhydrous magnesium sulfate for two hours. After filtration and evaporation under reduced pressure 0.28 g (72.9%) of (S)-3-hydroxy-2-pivalamido-N-tetradecylpropanamide was obtained as powder. ESI/MS (m/e) 385 [M+H]+. 1H NMR (d6-DMSO, 90 MHz) δ/ppm=7.642 (t, J=8.3 Hz, 1H), 7.088 (d, J=11.9 Hz, 1H), 4.818 (t, J=8.3 Hz, 1H), 4.198 (m, 1H), 3.552 (m, 2H), 3.037 (m, 2H), 1.124 (s, 9H), 1.572-0.728 (m, 36H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=177.861, 170.558, 62.406, 55.908, 39.161, 31.979, 29.732, 29.701, 29.443, 29.398, 27.910, 26.938, 22.778, 14.609. Anal. Calcd for C22H44N2O3 C, 68.70; H, 11.53; N, 7.28; O, 12.48.
To synthesize (S)-N-(3-hydroxy-1-oxo-1-(tetradecylamino)propan-2-yl)-3,5-dimethoxybenzamide (Compound II-5), at 0° C. to the solution of 0.10 g (0.55 mmol) of 3,5-dimethoxybenzoic acid in THF (80 mL), 0.08 g (0.59 mmol) of HOBt and 0.23 g (0.55 mmol) of (S)-2-amino-3-hydroxy-N-tetradecylpropanamide were added. Then 0.12 g (0.60 mmol) of DCC was added, and the pH of the solution was adjusted to 8 with 4-methylmorpholine. The reaction mixture was stirred at 0° C. for two hours, and at room temperature overnight. On evaporation the residue was dissolved in 130 mL of ethyl acetate. The solution was washed successively with saturated sodium bicarbonate, 5% potassium bisulfate, and saturated sodium chloride and the organic phase was separated and dried over anhydrous magnesium sulfate for two hours. After filtration and evaporation under reduced pressure, 0.05 g (20.0%) of (S)-N-(3-hydroxy-1-oxo-1-(tetradecylamino)propan-2-yl)-3,5-dimethoxybenzamide was obtained as powder. 1H NMR (d6-DMSO, 90 MHz) δ/ppm=8.186 (d, J=11.9 Hz, 1H), 7.830 (t, J=8.3 Hz, 1H), 7.054 (d, J=3.6 Hz, 2H), 6.700 (t, J=3.6 Hz, 1H), 4.874 (t, J=8.3 Hz, 1H), 4.413 (m, 1H), 3.788 (s, 6H), 3.674 (m, 2H), 3.054 (m, 2H), 1.708-0.705 (m, 27H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.345, 166.580, 160.946, 137.017, 106.150, 103.857, 62.361, 56.971, 56.120, 39.252, 31.979, 29.747, 29.701, 29.443, 29.398, 26.968, 22.778, 14.609. Anal. Calcd for C26H44N2O5 C, 67.21; H, 9.54; N, 6.03; O, 17.22. Found: C, 65.08; H, 9.59; N, 6.05; O, 17.23.
To synthesize (S)-2-acetamido-3-hydroxy-N-tetradecylpropanamide (Compound II-6), at 0° C. to the solution of 0.026 mL (0.48 mmol) of acetic acid in THF (50 ml), 32 mg (0.24 mmol) of HOBt and 0.10 g (0.24 mmol) of (S)-2-amino-3-hydroxy-N-tetradecylpropanamide were added. Then 53 mg (0.26 mmol) of DCC in 5 mL THF was added, and the pH was adjusted to 7-8 with 4-methylmorpholine. The reaction mixture was stirred at 0° C. for two hours, and at room temperature overnight. On evaporation the residue was dissolved in 80 mL of ethyl acetate. The solution was washed successively with saturated sodium bicarbonate, 5% potassium bisulfate, and saturated sodium chloride and the organic phase was separated and dried over anhydrous magnesium sulfate for two hours. After filtration and evaporation under reduced pressure crude product was obtained, and recrystallized using ethyl acetate to obtain 0.06 g (73.0%) of (S)-2-acetamido-3-hydroxy-N-tetradecylpropanamide as powder. 1H NMR (d6-DMSO, 90 MHz) δ/ppm=7.730 (m, 2H), 4.775 (t, J=8.3 Hz, 1H), 4.155 (m, 1H), 3.495 (m, 2H), 3.020 (m, 2H), 1.846 (s, 3H), 1.7400.632 (m, 27H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=168.538, 61.617, 56.849, 39.297, 31.964, 29.717, 29.686, 29.580, 29.382, 26.923, 22.763, 14.609.
General procedure for synthesis of nitro-, methyl-, chloro- and methoxy-substituted (S)-2-(benzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compounds II-7 through II-18): A mixture of 0.40 g (1.00 mmol) of (S)-2-amino-3-hydroxy-N-tetradecylpropanamide hydrochloride, 0.04 g (1.00 mmol) of NaOH, 1.00 mmol of substituted benzaldehyde, and 40 mL of methanol was stirred at room temperature for eight hours. The solvent was then evaporated under reduced pressure, and the residue was dissolved in 60 mL ethyl acetate. After filtration and evaporation, the residue was washed with 4×10 mL petroleum ether and 20 mL cooled methanol (4° C.) to yield substituted (S)-2-(benzylideneamino)-3-hydroxy-N-tetradecylpropanamide as powder.
(S)-2-(4-nitrobenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-7). Yield: 0.18 g (42%) as colorless powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.416 (s, 1H), 8.297 (d, J=8.7 Hz, 2H), 8.125 (d, J=8.7 Hz, 2H), 7.800 (t, J=5.7 Hz, 1H), 4.913 (t, J=6 Hz, 1H), 3.866 (m, 2H), 3.504 (m, 1H), 3.084 (m, 2H), 1.391 (m, 2H), 1.176 (m, 22H), 0.826 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=169.996, 161.706, 149.362, 142.104, 131.339, 124.415, 76.466, 63.621, 39.115, 31.964, 29.808, 29.632, 29.686, 29.398, 26.999, 22.763, 14.609.
(S)-2-(3-nitrobenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-8). Yield: 0.22 g (51%) as colorless powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.671 (s, 1H), 8.421 (s, 1H), 8.291 (m, 2H), 7.784 (m, 2H), 4.907 (t, J=6 Hz, 1H), 3.869 (m, 2H), 3.520 (m, 1H), 3.081 (m, 2H), 1.389 (m, 2H), 1.176 (m, 22H), 0.825 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.087, 161.539, 148.830, 138.126, 135.545, 130.929, 125.918, 123.003, 76.405, 63.636, 39.100, 31.964, 29.808, 29.671, 29.701, 29.382, 26.999, 22.778, 14.609.
(S)-2-(2-nitrobenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-9): Yield: 0.38 g (89%) as yellow powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.543 (s, 1H), 8.187 (d, J=7.5 Hz, 1H), 8.028 (d, J=7.5 Hz, 1H), 7.805 (t, J=7.5 Hz, 1H), 7.720 (t, J=7.5 Hz, 1H), 7.611 (t, J=5.7 Hz, 1H), 4.855 (t, J=6 Hz, 1H), 3.903 (dd, J=3.9 Hz, J=8.1 Hz, 1H), 3.793 (m, 1H), 3.506 (m, 1H), 3.084 (m, 2H), 1.397 (m, 2H), 1.198 (m, 22H), 0.832 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=169.905, 159.018, 149.665, 142.104, 133.981, 132.295, 130.656, 124.764, 76.329, 63.636, 39.100, 31.979, 29.808, 29.701, 29.641, 29.382, 26.968, 22.778, 14.624.
(S)-2-(4-methylbenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-10). Yield: 0.24 g (60%) as colorless powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.215 (s, 1H), 7.705 (m, 3H), 7.253 (d, J=8.1 Hz, 2H), 4.808 (t, J=6 Hz, 1H), 3.769 (m, 2H), 3.466 (m, 1H), 3.067 (m, 2H), 2.336 (s, 3H), 1.385 (m, 2H), 1.194 (m, 22H), 0.833 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.588, 163.011, 141.405, 134.011, 129.775, 129.061, 76.254, 63.834, 39.024, 31.994, 29.823, 29.732, 29.413, 26.999, 22.778, 21.760, 14.609.
(S)-2-(3-methylbenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-11). Yield: 0.31 g (77%) as colorless powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.223 (s, 1H), 7.686 (m, 2H), 7.595 (d, J=7.2 Hz, 1H), 7.306 (m, 2H), 4.823 (t, J=6 Hz, 1H), 3.790 (m, 2H), 3.479 (m, 1H), 3.080 (m, 2H), 2.342 (s, 3H), 1.387 (m, 2H), 1.203 (m, 22H), 0.833 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.542, 163.330, 138.445, 136.501, 132.250, 129.228, 129.107, 126.586, 76.345, 63.788, 39.024, 31.979, 29.808, 29.701, 29.398, 26.999, 22.778, 21.533, 14.624.
(S)-2-(2-methylbenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-12). Yield: 0.30 g (74%) as colorless powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.527 (s, 1H), 7.949 (d, J=7.5 Hz, 1H), 7.642 (d, J=5.7 Hz, 1H), 7.261 (m, 3H), 4.814 (t, J=6 Hz, 1H), 3.825 (m, 2H), 3.475 (m, 1H), 3.092 (m, 2H), 2.466 (s, 3H), 1.391 (m, 2H), 1.196 (m, 22H), 0.831 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.573, 161.918, 138.399, 134.436, 131.384, 131.096, 128.272, 126.526, 76.694, 63.803, 39.024, 31.994, 29.838, 29.747, 29.428, 27.014, 22.793, 19.604, 14.594.
(S)-2-(4-chlorobenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-13). Yield: 0.37 g (87%) as colorless powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.264 (s, 1H), 7.870 (d, J=7.8 Hz, 2H), 7.741 (t, J=5.7 Hz, 1H), 7.506 (d, J=7.8 Hz, 2H), 4.870 (t, J=6 Hz, 1H), 3.809 (m, 2H), 3.463 (m, 1H), 3.065 (m, 2H), 1.382 (m, 2H), 1.188 (m, 22H), 0.829 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.360, 162.040, 136.198, 135.393, 130.747, 129.304, 76.193, 63.712, 39.054, 31.979, 29.732, 29.398, 26.983, 22.778, 14.609.
(S)-2-(3-chlorobenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-14). Yield: 0.35 g (83%) as colorless powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.257 (s, 1H), 7.979 (s, 1H), 7.767 (m, 2H), 7.502 (m, 2H), 4.851 (t, J=6 Hz, 1H), 3.808 (m, 2H), 3.478 (m, 1H), 3.080 (m, 2H), 1.390 (m, 2H), 1.192 (m, 22H), 0.830 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.239, 161.888, 138.612, 134.254, 131.278, 131.126, 128.272, 128.014, 76.314, 63.742, 39.069, 31.979, 29.838, 29.717, 29.398, 27.014, 22.778, 14.609.
(S)-2-(2-chlorobenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-15). Yield: 0.35 g (83%) as colorless powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.603 (s, 1H), 8.185 (d, J=7.5 Hz, 1H), 7.772 (t, J=5.7 Hz, 1H), 7.465 (m, 3H), 4.868 (t, J=6 Hz, 1H), 3.908 (dd, J=3.9 Hz, J=8.1 Hz, 1H), 3.802 (m, 1H), 3.478 (m, 1H), 3.083 (m, 2H), 1.390 (m, 2H), 1.194 (m, 22H), 0.834 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.117, 159.231, 137.260, 134.998, 133.131, 130.458, 129.487, 127.983, 76.421, 63.545, 39.069, 31.979, 29.717, 29.398, 26.999, 22.778, 14.624.
(S)-2-(4-methoxybenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-16). Yield: 0.36 g (86%) as colorless powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.179 (s, 1H), 7.775 (d, J=9.0 Hz, 2H), 7.680 (t, J=5.7 Hz, 1H), 6.989 (d, J=9.0 Hz, 2H), 4.814 (t, J=6 Hz, 1H), 3.792 (s, 3H), 3.769 (m, 2H), 3.443 (m, 1H), 3.074 (m, 2H), 1.381 (m, 2H), 1.192 (m, 22H), 0.832 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.755, 162.465, 162.116, 130.732, 129.426, 114.576 76.178, 63.909, 55.984, 39.009, 31.979, 29.808, 29.717, 29.398, 26.983, 22.778, 14.624.
(S)-2-(3-methoxybenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-17). Yield: 0.36 g (86%) as colorless powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.234 (s, 1H), 7.719 (t, J=5.7 Hz, 1H), 7.422 (s, 1H), 7.354 (m, 2H), 7.048 (m, 1H), 4.857 (t, J=6 Hz, 1H), 3.790 (m, 5H), 3.480 (m, 1H), 3.081 (m, 2H), 1.364 (m, 2H), 1.192 (m, 22H), 0.833 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.482, 163.148, 160.142, 137.974, 130.306, 121.986, 117.659, 113.286, 76.284, 63.742, 55.893, 39.039, 31.979, 29.701, 29.398, 26.999, 22.778, 14.609.
(S)-2-(2-methoxybenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-18). Yield: 0.30 g (72%) as colorless powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.576 (s, 1H), 8.014 (d, J=7.8 Hz, 1H), 7.698 (t, J=5.7 Hz, 1H), 7.443 (t, J=7.8 Hz, 1H), 7.089 (d, J=7.8 Hz, 1H), 6.983 (t, J=7.8 Hz, 1H), 4.796 (t, J=6 Hz, 1H), 3.835 (s, 3H), 3.784 (m, 2H), 3.451 (m, 1H), 3.073 (m, 2H), 1.384 (m, 2H), 1.196 (m, 22H), 0.834 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.603, 159.291, 158.289, 133.161, 127.892, 124.355, 121.014, 112.375, 76.709, 63.818, 56.272, 39.009, 31.979, 29.808, 29.717, 29.398, 26.983, 22.778, 14.624.
General procedure for synthesis of hydroxy-substituted (S)-2-(benzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compounds II-19, II-20, and II-21): A mixture of 0.40 g (1.00 mmol) of (S)-2-amino-3-hydroxy-N-tetradecylpropanamide hydrochloride, 0.04 g (1.00 mmol) of NaOH, 1.00 mmol of hydroxybenzaldehyde, and 40 mL of methanol was stirred at room temperature for eight hours. The solvent was then evaporated under reduced pressure, and the residue was washed with cooled methanol to yield (S)-2-(hydroxybenzylideneamino)-3-hydroxy-N-tetradecylpropanamide as powder.
(S)-2-(4-hydroxybenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-19). Yield: 0.20 g (50%) as colorless powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.114 (s, 1H), 7.639 (m, 3H), 6.806 (d, J=8.1 Hz, 2H), 4.768 (t, J=6 Hz, 1H), 3.739 (m, 2H), 3.429 (m, 1H), 3.070 (m, 2H), 1.381 (m, 2H), 1.201 (m, 22H), 0.834 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.846, 162.617, 160.734, 130.868, 127.953, 115.958, 76.132, 63.955, 39.994, 31.979, 29.797, 29.717, 29.382, 26.983, 22.778, 14.624.
(S)-2-(3-hydroxybenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-20). Yield: 0.21 g (52%) as colorless powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.166 (s, 1H), 7.635 (t, J=5.7 Hz, 1H), 7.235 (m, 3H), 6.860 (m, 1H), 3.783 (m, 2H), 3.464 (m, 1H), 3.075 (m, 2H), 1.385 (m, 2H), 1.202 (m, 22H), 0.834 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=170.497, 163.406, 158.365, 137.883, 130.170, 120.255, 118.782, 115.123, 76.223, 63.773, 39.039, 31.994, 29.853, 29.732, 29.413, 27.014, 22.793, 14.624.
(S)-2-(2-hydroxybenzylideneamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-21). Yield: 0.15 g (37%) as yellow powder. 1H NMR (d6-DMSO, 300 MHz) δ/ppm=8.468 (s, 1H), 7.924 (t, J=5.7 Hz, 1H), 7.473 (d, J=7.5 Hz, 1H), 7.322 (t, J=7.5 Hz, 1H), 6.882 (m, 2H), 4.926 (br, 1H), 3.918 (dd, J=4.5 Hz, J=7.8 Hz, 1H), 3.777 (dd, J=4.5 Hz, J=10.8 Hz, 1H), 3.569 (m, 1H), 3.050 (m, 2H), 1.373 (m, 2H), 1.195 (m, 22H), 0.835 (t, J=6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=169.571, 167.278, 161.022, 133.115, 132.478, 119.587, 119.238, 117.127, 75.115, 63.408, 39.176, 31.979, 29.717, 29.656, 29.398, 26.983, 22.778, 14.624.
General procedure for synthesis of substituted (S)-2-(benzylamino)-3-hydroxy-N-tetradecyl propanamide (Compounds II-22 through II-25): To the solution of 0.20 mmol substituted (S)-2-(benzylideneamino)-3-hydroxy-N-tetradecylpropanamides II-9, II-15, II-18, and II-21 in 10 mL of methanol, 20 mg (0.54 mmol) of NaBH4 was added. The reaction mixture was stirred at room temperature for 10 h, and evaporated under vacuum. The residue was purified by thin layer chromatography to give substituted (S)-2-(benzylamino)-3-hydroxy-N-tetradecylpropanamide II-22 to II-25 as colorless powder in 65.6-78.2% yields.
(S)-2-(2-nitrobenzylamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-22). Yield: 75.3%, colorless powder. GC/MS (m/e): 435 M+, 418 [M−.OH]+, 1H NMR (d6-DMSO, 300 MHz) δ/ppm=7.926 (d, J=3.6 Hz, 1H), 7.720 (m, 3H), 7.500 (t, J=8.4 Hz, 1H), 4.720 (t, J=5.4 Hz, 1H), 3.977 (d, J=15.3 Hz, 1H), 3.847 (d, J=15.3 Hz, 1H), 3.462 (m, 2H), 3.021 (m, 3H), 1.359 (m, 2H), 1.209 (m, 24H), 0.833 (t, J=6.6 Hz, 3H). 13C NMR (d6-DMSO, 75 MHz) δ/ppm=172.243, 137.245, 135.803, 133.844, 131.415, 128.834, 124.947, 64.608, 63.120, 48.741, 38.963, 31.979, 29.732, 29.671, 29.382, 27.014, 22.778, 14.609. Anal. Calcd for C24H41N3O4: C, 66.17; H, 9.49; N, 9.65; O, 14.69. Found: C, 66.60; H, 9.69; N, 9.54; O, 14.33.
(S)-2-(2-chlorobenzylamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-23). Yield: 73.4%, colorless powder. GC/MS (m/e): 424 M+, 1H NMR (CDCl3, 300 MHz) δ/ppm=7.404˜7.233 (m, 5H), 3.899 (s, 2H), 3.794 (t, J=5.1 Hz, 2H), 3.237 (t, J=5.7 Hz, 3H), 1.633 (m, 2H), 1.492 (t, J=6.9 Hz, 2H), 1.257 (m, 24H), 0.882 (t, J=6.9 Hz, 3H). 13C NMR (CDCl3, 75 MHz) δ/ppm=136.319, 130.641, 130.048, 129.168, 127.270, 114.971, 63.180, 62.922, 50.639, 39.312, 32.145, 29.868, 29.762, 29.579, 29.504, 27.150, 22.899, 14.335. Anal. Calcd for C24H41ClN2O2: C, 67.82; H, 9.72; N, 6.59; O, 7.53. Found: C, 67.58; H, 9.93; N, 6.69; O, 9.72.
(S)-2-(2-methyoxybenzylamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-24). Yield: 78.2%, colorless powder. GC/MS (m/e): 319 [M−H]+, 1H NMR (CDCl3, 300 MHz) δ/ppm=7.359-6.906 (m, 5H), 4.076 (dd, J=3.0 Hz, J=11.1 Hz, 1H), 3.855 (s, 3H), 3.758 (m, 2H), 3.590 (m, 1H), 3.250 (m, 2H), 2.247 (m, 1H), 1.501 (m, 2H), 1.254 (m, 24H), 0.880 (t, J=6.9 Hz, 3H). 13C NMR (CDCl3, 75 MHz) δ/ppm=136.319, 130.641, 130.048, 129.168, 127.270, 114.971, 63.180, 62.922, 52.203, 50.639, 39.312, 32.145, 29.868, 29.762, 29.579, 29.504, 27.150, 22.899, 14.335. Anal. Calcd for C25H44N2O3: C, 71.39; H, 10.54; N, 6.66; O, 11.41. Found: C, 71.30; H, 9.82; N, 6.90; O, 11.81.
(S)-2-(2-hydroxybenzylamino)-3-hydroxy-N-tetradecylpropanamide (Compound II-25). Yield: 75.3%, colorless powder. GC/MS (m/e): 405 [M−H]+, 389 [M−.OH]+, 1H NMR (CDCl3, 300 MHz) δ/ppm=7.188 (t, J=7.5 Hz, 1H), 6.985 (d, J=7.5 Hz, 1H), 6.846 (d, J=7.5 Hz, 1H), 6.799 (t, J=7.5 Hz, 1H), 6.196 (br, 1H), 4.090 (d, J=14.1 Hz, 1H), 3.839 (m, 2H), 3.757 (dd, J=5.4 Hz, J=11.1 Hz, 1H), 3.281 (m, 2H), 3.142 (t, J=5.4 Hz, 1H), 1.513 (t, J=6.6 Hz, 2H), 1.262 (m, 24H), 0.882 (t, J=6.6 Hz, 3H). 13C NMR (CDCl3, 75 MHz) δ/ppm=159.003, 129.396, 129.198, 122.335, 119.815, 116.702, 62.953, 61.283, 50.578, 39.859, 32.145, 29.868, 29.807, 29.716, 29.579, 29.473, 27.089, 22.899, 14.335. Anal. Calcd for C24H42N2O3: C, 70.89; H, 10.41; N, 6.89; O, 11.80. Found: C, 70.29; H, 10.99; N, 6.86; O, 11.92.
Cell Cultures. Human cancer cell lines derived from breast, MCF-7, endocrine-resistant MDA-MB-231, and chemoresistant MCF-7TN-R were cultured in 75 cm2 culture flasks in DMEM (Invitrogen, Co.) supplemented with 10% FBS (Life Technologies, Inc., Gaithersburg, Md.), basic minimum MEM essential (50×, Invitrogen Co.) and MEM non-essential (100×, Invitrogen, Co.) amino acids, sodium pyruvate (100× Invitrogen Co.), antimicotic-antibiotic (10,000 U/mL penicillin G sodium; 10,000 μg/mL streptomycin sulphate; 25 μg/mL amphotericin B as Fungizone®), and human recombinant insulin (4 mg/mL Invitrogen Co). Culture flasks were maintained in a tissue culture incubator in a humidified atmosphere of 5% CO2 and 95% air at 37° C.
Clonogenic Survival Assay. MCF-7, MDA-MB-231, or MCF-7TN-R cells were plated in 6-well plates at 1000 cells per well. Twenty-four hours later, cells were treated with varying concentrations of the compound and then monitored microscopically for colony growth. Ten days later the cells were fixed with 3% glutaraldehyde. Following fixation for 15 min, the plates were washed and stained with a 0.4% solution of crystal violet in 20% methanol for 30 min, washed with PBS, and air-dried. Colonies of 30 cells were counted as positive. Results are normalized to percent clonogenic survival from untreated control cells. Statistical analysis of IC50 values were calculated from concentration-response curves using GraphPad Prism 5.0 (Graphpad Software, San Diego, Calif.), using with the equation:
Y=Bottom+(Top−bottom)/1+10 Log EC50−X.
Viability Assay using MTT. The effect of ceramide and compounds on cell growth was determined using MTT viability assays. MCF-7, MDA-MB-231, or MCF-7TN-R cells were plated at 7.5×105 cells per well in a 96-well plate in phenol-free DMEM supplemented with 5% FBS and allowed to adhere overnight. Cells were then treated with compounds I-1, I-2, I-3, or I-4 (ranging from 0.1 to 100 μM) for 24 h. Following that treatment, 20 μL of MTT (5 mg/ml) reagent was added to each well prior to incubation for 4 hr. Cells were then lysed with 20% SDS in 50% dimethylformamide. The pH and absorbances were read on an EL×808 Microtek plate reader (Winooski, Vt.) at 550 nm, with a reference wavelength of 630 nm.
Apoptosis ELISA Assay. The induction of apoptosis by compounds was assayed using the nucleosome ELISA kit (Roche). The kit quantified formation of cytoplasmic histone-associated oligonucleosome DNA fragments resulting from apoptosis. MCF-7, MDA-MB-231, or MCF-7TN-R cells were plated at 7500 cell per well in 96-well plates and treated for 24 hours with double the IC50 value concentrations of the ceramide (8.3 μM) and II-3 (9.4 μM). The induction of apoptosis was determined by the amount of nucleosomes in the cytoplasm per the manufacturer's protocol. The values are the mean±SE of three independent experiments.
Effect on cellular sphingolipid species using lipidomics analysis. (A) MCF-7, (B) MDA-MB-231, and (C) MCF-7TN-R cells were treated with ceramide (10 μM) and II-3 (10 μM) for 24 h. The values are the mean±SE of two independent experiments. S2 Endogenous lipid levels were quantified by mass spectrometry (Lipidomics Core, Medical University of South Carolina) according to published methods. Briefly, cells were collected, fortified with internal standards and extracted with ethyl acetate/isopropyl alcohol. ESI/MS/MS analyses of sphingoid bases, sphingoid base 1-phosphates, ceramides, and sphingomyelins were performed on a Thermo Finnigan TSQ 7000 triple quadrupole mass spectrometer.
Statistical Analysis. Statistical analysis of IC50 values were calculated from concentration-response curves using GraphPad Prism 5.0 (Graphpad Software, San Diego, Calif.), using with the equation:
Y=Bottom+(Top−bottom)/1+10 Log EC50−X
assuming a standard slope, where the response goes from 10% to 90% of maximal as X increases over two log units. Differences in IC50 were compared using Student's unpaired t-test with p<0.05 as the limit of statistical significance. Experiments comparing multiple concentrations to the control were tested with one-way ANOVA with Bonferroni post-test to compare individual concentrations. All statistical analysis were done using GraphPad Prism 5.0. All statistical analysis was done using GraphPad Prism 5.0.
The tables below show the IC50 values of the indicated compounds for (1A) viability assays and (1B) clonogenic survival assays from experiments shown in
The effects of compounds I-1, I-2, I-3, and I-4 on clonogenic survival are shown in
The four compounds were effective in diminishing chemoresistant and endocrine resistant breast cancer cell viability and survival. Compounds I-1 and I-3 display the lowest IC50 values for the viability and survival assays for MCF-7TN-R, respectively. Compound I-3 is substantially more effective than the other compounds in decreasing chemoresistant breast cancer cell survival. This increased efficacy may be due to the presence of the imine functional group in Compound I-3. This functional group is believed not to be hydrolyzed by the enzyme ceramidase, effectively blocking the production of sphingosine and preventing compound depletion.
Compounds II-1, II-2, II-3, II-4, II-5, and II-6 were compared for their inhibitory effect on breast cancer clonogenic survival. Cells were treated with varying concentration of compound, ranging from 0.1 μM-20 μM for 10 days. The data displayed in
Compounds II-1, II-2, II-3, II-4, II-5, and II-6 showed biological activity in the MCF-7 cell line. Compound II-2 and compound II-3, both missing the original amide carbonyl group, had the greatest efficacy in MCF-7 cells, with IC50 values of 4.97 μM and 4.69 μM, respectively. Interestingly, these two compounds also showed activity in endocrine resistant MDA-MB-231 cells and chemoresistant MCF-7-TNR cells as well. Compound II-3 appeared most potent compound and more effective than C8-ceramide in treating drug resistant breast cancer, with IC50 values of 2.35 μM in MDA-MB-231 cells and 7.67 μM in MCF-7-TNR cells.
The ability of compound II-3 to induce apoptosis in MCF-7 cells was tested. Using a Cell Death Detection ELISA (Roche) to assess apoptosis, IC50 was measured for compound II-3 and C8-ceramide. As seen in
The ability of compound II-3 to block proliferation as an anti-survival mechanism in addition to apoptosis was determined by measuring anti-proliferative effects. Compound II-3 has a greater anti-proliferative effect than C8-ceramide in MCF-7, MDA-MB-231, and MCF-7TN-R cell lines, with IC50 values of 4.5 μM, 1.8 μM, and 1.2 μM, respectively (
The selectivity of compound II-3 and C8-ceramide to inhibit cell growth of cancer cells was determined by performing proliferation assays using MCF10A (normal breast epithelial) cells (
The effect of compound II-3 on endogenous sphingolipid levels was compared to C8-ceramide using Lipidomics Analysis (
Nineteen compounds were synthesized using fifteen benzaldehydes as starting material. Five different substituents were incorporated into each position of the phenyl ring (ortho- (2-), meta- (3-), or para- (4-)) in order to determine the most effective combination of substituent and position. These were tested as potential anti-proliferative agents in MCF-7TN-R cells, and the structure-activity relationships were studied using several parameters. Table 3 shows compounds II-7 to II-21;
It is noted that terms like “preferably,” “commonly,” and “typically” are not utilized herein to limit the scope of the claimed invention or to imply that certain features are critical, essential, or even important to the structure or function of the claimed invention. Rather, these terms are merely intended to highlight alternative or additional features that may or may not be utilized in a particular embodiment of the present invention.
Detailed descriptions of one or more embodiments are provided herein. It is to be understood, however, that the present invention may be embodied in various forms. Therefore, specific details disclosed herein (even if designated as preferred or advantageous) are not to be interpreted as limiting, but rather are to be used as a basis for the claims and as a representative basis for teaching one skilled in the art to employ the present invention in any appropriate manner.
This application claims the benefit of U.S. Provisional Application No. 61/207,293, filed Feb. 10, 2009, which is herein incorporated by reference in its entirety. This application also claims the benefit of U.S. Provisional Application No. 61/275,764, filed Sep. 2, 2009, which is herein incorporated by reference in its entirety.
| Filing Document | Filing Date | Country | Kind | 371c Date |
|---|---|---|---|---|
| PCT/US2010/023604 | 2/9/2010 | WO | 00 | 10/13/2011 |
| Number | Date | Country | |
|---|---|---|---|
| 61207293 | Feb 2009 | US | |
| 61275764 | Sep 2009 | US |
