DATA PROCESSING, ANALYSIS METHOD OF GENE EXPRESSION DATA TO IDENTIFY ENDOGENOUS REFERENCE GENES

Abstract
Disclosed are data processing and analysis methods for gene expression data for identifying endogenous reference genes and a composition for the quantitative analysis of gene expression, comprising a pair of primers and/or probes useful in amplifying the identified endogenous reference genes. Introduced with the concepts of “Zero's proportion” and CV, the method allows different datasets to be integrally analyzed, thereby searching for novel reference genes. By the method, 2,087 genes are first found as housekeeping genes which are expressed in most tissues, and the usefulness thereof in the relative quantification of different target genes is determined by analyzing their expression stability. Of the 2,087 genes, 13 genes show higher expression stability with lower expression levels across a wide range of samples than traditional reference genes such as GAPDH and ACTS, and therefore are suitable for the normalization of universal genes having relatively low expression levels.
Description
SEQUENCE LISTING

The instant application contains a Sequence Listing which has been submitted in ASCII format via EFS-Web and is hereby incorporated by reference in its entirety. Said ASCII copy, created on May 24, 2013, is named 84346-CON-301519_ST25.xt and is 8,058 bytes in size.


TECHNICAL FIELD

The present invention relates to a data processing and analysis method of gene expression data for identifying endogenous reference genes and a composition for the quantitative analysis of gene expression, comprising a pair of primers and/or probes useful in the amplification of the identified endogenous reference genes. More particularly, the present invention relates to a data processing and analysis method for identifying novel endogenous reference genes using gene expression data from EST. SAGE and microarray datasets with zero's proportion and coefficient of variation, and a composition for the quantitative analysis of gene expression, comprising a pair of primers and/or probes useful in the amplification of the identified endogenous reference genes.


BACKGROUND ART

As many as 50,000-100,000 genes can be found in each human cell, but are selectively used in each cell. Of them, a significant number of genes are involved in basic functions and routine cellular metabolic processes required for the sustenance of the cell. Such genes are called housekeeping genes (hereinafter referred to as “HKG”). In various gene expression analysis methods utilizing the quantification of messenger RNA (hereinafter referred to as “mRNA”) to determine expression levels of specific or multiple genes with the aim of identifying the functions of specific genes, searching for genes directed to specific functions profiling the gene expression of organisms under specific conditions, and describing other biological purposes, endogenous reference genes mean housekeeping genes useful in the normalization of the mRNA level for the relative quantification of genes of interest.


Endogenous reference genes are most widely used to normalize mRNA level for accurate comparison of gene expression between different samples (Vandesompele J et al., Genome Biol 3(7), p. RESEARCH0034, 2002). Endogenous reference genes are usually used in gene expression analysis techniques ranging from conventional reverse transcriptase polymerase chain reaction (hereinafter referred to as “RT-PCR”) to recently developed quantitative real time PCR (hereinafter referred to as “qRT-PCT”), serial analysis of gene expression (hereinafter referred to as “SAGE”) and microarray. Traditional reference genes such as glyceraldehyde-3-phosphate dehydrogenase (hereinafter referred to as “GAPDH”) and β-actin (hereinafter referred to as “ACTB”) have been used without proper validation, assuming that they are expressed at constant levels across different samples, irrespectively cell or tissue type and are not regulated by experimental treatment.


However, it is well known that the expression of traditional reference genes may vary among different tissues and cell types and can be regulated by experimental conditions, including sample treatment, developmental stage and pathological states (Bereta and Berets M, Biochem Biophys Res Commun 217(1)363-369, 1995; Tricarico C et a. Anal Biochem 309(2):293-300, 2002; Thellin O et al., J Biotechnol 75(2-3):291-295, 1999; Rubie C et al., Mol Cell Probes 19(2):101-109, 2005; Schmittgen T D and Zakrajaek B A. J Biochem Biophys Methods 46(1-2):69-81, 2000; Zhong H and J Simons W. Biochem Biopbys Res Common 259(3):523-526, 1999; Selvey S et al., Mol Cell Probes 15(5):307-311, 2001; Wu Y Y and LRees J, Acta Derm Venerol 80(1):2-3, 2000; Lee P D et al., Genome Res 12(2):292-297, 2002; Hamalainen H K et al., Anal Biochem 299(1):63-70, 2001). The use of inappropriate reference genes in the relative quantification of gene expression may result in biased expression profile. This concern has already been raised by many researchers (Tricarico C et al., Anal Biochem 309(2):293-300 2002; Dheda K et al., Anal Biochem 344(1):141-143, 2005; de Kok J B et al., Lab invest 85(1):154-159, 2005; Brunner A M et al., BMC Plant Biol 4:14, 2004). Particularly, the selection of proper endogenous reference genes is essential for accurate measurement in qRT-PCR, which is a reliable method for detecting gene expression with high sensitivity and accuracy though accurate normalization, and may not be required in qualitative analysis such as northern blot or conventional RT-PCR (Huggett J et al., Genes Immun 6(4):279-284, 2005).


With the acknowledgement of the importance of the proper validation of traditional reference genes and the identification of more suitable reference genes, a number of studies have been undertaken to select the most suitable genes among commonly used reference genes in specific experimental conditions, or to identify novel genes, which are superior to the traditional gees that are universally used for mRNA quantification. However, most of the previous studies have been focused on the selection (validation) of the most stable genes among commonly used reference genes in specific experimental systems or a given set of limited tissue samples (Goidin D et al., Anal Biochem 295(1):17-21, 2001; Haller P et al., Anal Biochem 335(1): 1-9, 2004; Ohl F et al., J Mol Med 83(12):1014-1024, 2005; Radonic A et al., Biochem Biophys Res Commun 313(4):856-862, 2004). Some programs are now available for identifying the most appropriate genes among multiple reference genes using qRT-PCR results (Vandesompele J ea al, Genome Biol 3(7), p. RESEARCH0034, 2002; Pfaffl M W et al. Biotechnol Let 26(6):509-15, 2004; Andersen C L et al., Cancer Res 64(15):5245-5250, 2004).


In addition, novel endogenous reference genes have been found mostly on the basis of microarray data (Hamalainean H K et al., Anal Biochem 299(1):63-70, 2001; Hoerndli F J et al., Anal Biochem 335(1):30-41, 2004; Czechowski T et al., Plant Physiol 139(1):5-17, 2005; Jin P et al., BMC Genomics, 5(1):55, 2004; Kobayashi M S et al., J. Neurosci Res 76(4):512-518, 2004; Shulzhenko N et al., Biochem Biophys Res Commun 337(1):306-12, 2005). As is well-known, the microarray technique has some problems and limitations (errors) due to the potential for inaccurate cross hybridization between probes and unintended transcripts, the potential for differences in hybridization efficiency between probe seta, and the potential for the incorrect annotation of transcripts (Haverty P M et al., Bioinformatics 20(18):3431-3441, 2004; van Ruissen F et al., BMC Genomics 6:91, 2005). The microarray technique also allows the detection of expression of genes only on the chip, in contrast to expressed sequence tag (hereinafter referred to as “EST”) and SAGE, in which the expulsion profiles of whole transcripts in samples (cDNA libraries) can be measured (van Ruissen F et al., BMC Genomics 691, 2005. The use of gene expression data from different platforms together is expected to complement the limitation of individual platforms. For example, SAGE is far more sensitive than EST for detecting low-abundance transcripts (Sun M et al, BMC Genomics 5(1):1-4, 2004).


Even if an ideal endogenous reference gene does not exist, it is possible to find a more ideal endogenous reference gene applicable to most experimental conditions than traditional reference genes through various, large gene expression data.


Leading to the present invention, intensive and thorough research on accurate comparison of gene expression among different samples, conducted by the present inventors, resulted in the finding that gene expression datasets constructed from microarray data, in addition to EST and SAGE data, are useful in searching for endogenous reference genes, and that novel reference genes identified using the datasets are superior to previously used genes and show more stable expression across a wide range of samples, thus being universally useful for the normalization of gene expression, rather than being limited for use on specific tissue samples or in specific studies.


DISCLOSURE
Technical Problem

Therefore, it is an object of the present invention to provide a method of processing and analyzing gene expression data, with a statistical concept introduced thereinto, to identify endogenous reference genes which are superior to traditional reference genes in terms of expression stability across a wide range of samples, thus being universally useful for the normalization of gene expression, and a composition for the quantitative analysis of gene expression, comprising a pair of primers and/or probes useful in the amplification of the identified endogenous reference genes.


Technical Solution

In order to accomplish the above objects, the present invention provides a method for selecting candidate endogenous reference genes (ERG), comprising: 1) computing expression levels of genes from EST, SAGE and microarray datasets; and 2) identifying genes which are constitutively expressed across a wide range of tissues using the computed gene expression levels of step 1) and zero(0)'s proportions thereof.


Also, the present invention provides a composition for detecting at least one candidate endogenous reference gene selected according to the present invention, comprising a detection reagent applicable to amplification of the candidate endogenous reference gene.


Also there is provided a method for quantifying an expression level of a gene of interest, comprising 1) performing real-time PCR to amplify the gene of interest with a pair of primers and/or probes and then performing real-time PCR to amplify the a candidate endogenous reference gene with the composition; and 2) normalizing the expression level of the gene of interest relative to that of the candidate endogenous reference gene.


Furthermore, there is provided a method for selecting guide genes, comprising: measuring the candidate endogenous reference genes selected using the method for coefficient of variation (CV); and ranking the endogenous reference genes in an ascending order of CV.


Also, the present invention provides a composition for detecting at least one guide reference gene identified according to the present invention, comprising a detection reagent applicable to amplification of the guide gene.


There is provided a method for quantifying an expression level of a target gene, comprising: 1) synthesizing cDNA from RNA of a subject; 2) performing real-time PCR to amplify the target gene using a pair of primers and/or probes, with the cDNA serving as a template and then performing real-time PCR to amplify the candidate endogenous reference gene using the composition; and 3) normalizing an expression level of the target gene to that of the candidate endogenous reference gene of step 2).


Moreover, there is provided a method for identifying the amplification of a target gene in genomic DNA, comprising: 1) amplifying the target gene with a pair of primers or probes through real-time PCR, with a genomic DNA of a subject serving as a template and then performing real-time PCR to amplify the candidate endogenous reference gene with the composition; and 2) normalizing an expression level of the target gene to that of the candidate endogenous reference gene.


Advantageous Effects

Introduced with the concepts of ‘Zero's proportion’ and CV, the method of the present invention allows different datasets to be integrally analyzed, thereby searching for novel reference genes. By the method, 2.087 genes were first found as housekeeping genes which are expressed in most tissues, and the usefulness thereof in the relative quantification of different target genes was determined by analyzing their expression stability. Out of the 2,087 genes 13 genes were found to show higher expression stability with lower expression levels across a wide range of samples than traditional reference genes such as GAPDH and ACTB, and therefore are suitable for the normalization of universal genes having relatively low expression levels.





DESCRIPTION OF DRAWINGS


FIG. 1 is a schematic view showing a process of identifying endogenous reference genes (ERGs).



FIG. 2 is a graph showing a functional distribution of candidate ERGs classified according to FunCat (Functional Classification Catalogue):


Numeral: numbers of genes


A: protein fate (folding, modification, destination): B: cellular transport, transport facilitation and transport route; C: transcription; D: cellular communication/signal transduction mechanism: E: cell cycle and DNA processing; FP protein synthesis; G: metabolism; H: energy; I: cell fate; J: interaction with cellular environment; K: interaction with environment(systemic); L: organ differentiation: M: development (systemic); N: protein activity regulation; o: tissue differentiation; P: Biogenesis of cellular components; Q: cell rescue, defense and virulence; and R: cell type differentiation.



FIG. 3 shows correlations of gene expression of 2.087 candidates ERG among four datasets [EST (expressed sequence tag). ShortSAGE. LongSAGE and microarray datasets].



FIG. 4 shows correlations of CV (coefficient of variation %) of 2,087 candidates ERGs among four datasets (EST. ShortSAGE. LongSAGE and microarray datasets).



FIG. 5 is a graph showing the comparison of gene expression between the candidate ERGs, selected according to the present invention, and non-candidate ERGs among each dataset:


Box and Whisker plots: expression distribution expressed as natural log value (In):


Bottom surface of box: corresponding to 25% of the total expression level in ascending order, and


Top surface of box: corresponding to 75% of the total expression levels in ascending order.



FIG. 6 shows the comparison of gene expression between the 13 ERGs of the present invention and 13 arbitrarily selected traditional ERGs.



FIG. 7 shows the comparison of CV (%) between the 13 ERGs of the present invention and 13 arbitrarily selected traditional ERGs.



FIG. 8 is a graph showing mRNA level distributions of the novel and traditional ERGs, determined by real-time PCR, in 48 samples including frozen human tissues and cancer cell lines.



FIG. 9 shows mRNA level distributions, expressed as Cp values determined using real-time PCR, of the novel and traditional ERGs in 48 samples (including frozen human tissues and cancer cell lines) and 60 FFPE (formalin-fixed paraffin-embedded) tissues. In the boxes, the middle lines represent median values of Cp. and the bottom and the top surfaces correspond to 25% and 75% of the total Cp values in ascending order, respectively.





BEST MODE

The terms used herein are defined before embodiments of the present invention are described in detail.


The term “candidate reference gene”, as used herein, is intended to refer to a gene, selected using the method of the present invention, which shows a housekeeping gene (HKG)'s properties of being constitutively expressed across a wide range of tissues.


The term “guide gene”, as used herein, is intended to refer to a gene, selected from among candidate reference genes, which shows as low an expression level and variation in expression level as most transcripts within cells, which is also expressed as “reference gene” or “endogenous reference gene”.


In accordance with an aspect thereof, the present invention provides a method for selecting candidate endogenous reference genes (ERG), comprising:


1) computing expression levels of genes from EST. SAGE and microarray datasets; and


2) identifying genes which are constitutively expressed across a wide range of tissues using the computed gene expression levels of step 1) and zero(0)'s proportions thereof.


Endogenous reference genes (ERG) are most widely used to normalize mRNA levels for an accurate comparison of gene expression between different samples. ERG is usually applied to gene expression analysis, such as RT-PCR (reverse transcriptase polymerase chain reaction), qRT-PCR (quantitative real time PCR), SAGE (serial analysis of gene expression) and microarray. Traditional reference genes, such as glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and β-actin (ACTB), have been used without proper validation, assuming that they are expressed at constant levels across different samples irrespectively the various origins thereof, and we not regulated according to experimental conditions. However, it is well known that the expression of traditional reference genes may differ from one tissue or cell type to another and can be regulated by experimental conditions, including sample treatment, developmental stage and pathological states.


In order to search for candidate housekeeping genes (HKG) whose expression is maintained on similar levels in most tissues, first, datasets were constructed using EST and SAGE human gene expression data collected from the publicly available CGAP site (The Cancer Genome Project, http://cgap.nci.nih.gov/) and microarray gene expression data obtained from the GeneExpress Oncology Datasuite™ of Gene Logic Inc., based on the Affymetrix Human Genome U133 array set. Although the above-mentioned databases were combined to construct new datasets, it should be noted that availability is not limited to the databases. Using the expression data from the datasets, the expression level of a given gene is determined according to the following Mathematical Formulas 1 and 2. The EST (expressed sequence tag) expression levels and the SAGE expression levels of a gene in a given library can be calculated according to Mathematical Formulas 1 and 2, respectively













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In accordance with the present invention, data from the different databases were analyzed to determine their integrity and to identify commonality therebetween. In this regard, the concept of zero (0)'s proportion is introduced to determine the possibility that a given gene might be a housekeeping gene (HKG), which is ubiquitously expressed across most tissues.
















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As expressed by Mathematical Formula 3, zero(0)'s proportion is defined as the ratio of the number of the tissues with no expression of a given gene to the total number of tissues. The lower the 0's proportion is, the higher is the possibility that the given gene might be an HKG. Utilizing the concept of 0's proportion, genes which have low 0's proportions in EST. ShortSAGE, and LongSAGE datasets were sorted, 2.087 genes common to the 3 datasets were selected and categorized as “candidate reference genes” or “candidate ERGs”. The genes which have low 0's proportions refer to genes with 0's proportions less than 0.4 for EST, 0.1 for ShortSAGE, and 0.3 for LongSAGE. The mean gene expression values and CV (%) of the 2,067 candidate reference genes were calculated using another dataset. Affymetrix HG-U133, as well as in EST and SAGE datasets. The expression data of 1,990 UniGene clusters (gene expression data for 5,238 different probe sets, 5317 fragments) corresponding to 2,087 ERGs were obtained.


As a result, a significant correlation of the mean expression values is observed among all of the four datasets (EST (expressed sequence tag). ShortSAGE LongSAGE and microarray dataset)) (see FIG. 3). Correlation analysis on CV showed lower agreement between datasets than on the mean gene expression levels, although a significant correlation was detected (see FIG. 4).


In addition, the candidate ERGs were compared with non-ERGs with regard to gene expression in each dataset. As we expected, the mean gene expression level of the candidate ERGs was significantly higher than that of non-ERGs in all of the four datasets (p<0.0001) (see FIG. 5).


In accordance with another aspect thereof, the present invention provides a composition for detecting at least one candidate endogenous reference gene selected according to the present invention, comprising a detection reagent applicable to amplification of the candidate endogenous reference gene.


The candidate endogenous reference gene useful in the present invention is one or more genes selected from a group consisting of Accession No. Hs 120(PRDX6), Accession No. Hs 142(SULT1A1), Accession No. Hs 202(BZRP), Accession No. Hs 429(ATP5G3), Accession No. Hs 695(CSTB), Accession No. Hs 808(HNRPF), Accession No. Hs 861(MAPK3), Accession No. Hs 1063(SNRPC), Accession No. Hs 1103(TGPB1), Accession No. Hs 2430(TCFL1), Accession No. Hs 2533(ALDH9A1), Accession No. Hs 2795(LDHA), Accession No. Hs 2853(PCBP1), Accession No. Hs 3100(KARS), Accession No. Hs 3254(MRPL23), Accession No. Hs 3353(G3BP), Accession No. Hs 3416(ADFP), Accession No. Hs 439(STOML2), Accession No. Hs 3530(PUSIP1), Accession No. Hs 3989(PLXNB2), Accession No. Hs 4055(KLF6), Accession No. Hs 4742(GPAA1), Accession No. Hs 4747(DKC1), Accession No. Hs 4766(FAM32A), Accession No. Hs 4859(CCNL1), Accession No. Hs 4997(RBM23), Accession No. Hs 4998(TMOD3), Accession No. Hs 5062(TM4SF8), Accession No. Hs 5086(MGC10433), Accession No. Hs 5120(DNCL1), Accession No. Hs 5158(ILK), Accession No. Hs 5245(FLJ20643), Accession No. Hs 5258(MAGED1), Accession No. Hs 5268(ZDHHC4), Accession No. Hs 5298(ADIPOR1), Accession No. Hs 5308(UBA52), Accession No. Hs 5324(C2orf25), Accession No. Hs 5345(RNPEPL1), Accession No. Hs 5662(GNB2L1), Accession No. Hs 5710(CREG1), Accession No. Hs 5719(CNAP1), Accession No. Hs 5912(FBXO7), Accession No. Hs 5947(RAB8A), Accession No. Hs 6396(JTB), Accession No. Hs 6454(RGS19IP1), Accession No. Hs 6459(OPR172A), Accession No. Hs 6551(ATP6AP1), Accession No. Hs 6891(SFRS6), Accession No. Hs 7101(ANAPC5), Accession No. Hs 7236(NOSIP), Accession No. Hs 7476(ATP6V0B), Accession No. Hs 7527(DKFZP566E144), Accession No. Hs 7744(NDUFV1), Accession No. Hs 7753(CALU), Accession No. Hs 7768(FIBP), Accession No. Hs 7862(PNRC2), Accession No. Hs 7910(RYBP), Accession No. Hs 7917(HIG1), Accession No. Hs 8102(RPS20), Accession No. Hs 8372(UQCR), Accession No. Hs 8737(WDR6), Accession No. Hs 8752(TMEM4), Accession No. Hs 8765(DDX42), Accession No. Hs 8859(CANT1), Accession No. Hs 8867(CYR61), Accession No. Hs 9003(FIJ13868), Accession No. Hs 9015(MGC52000), Accession No. Hs 9043(C14orf120), Accession No. Hs 9234(NIFIE14), Accession No. Hs 9235(NME4), Accession No. Hs 9527(C2orf28), Accession No. Hs 9534(SEC11L1), Accession No. Hs 9573(ABCF1), Accession No. Hs 9589(UBQLN1), Accession No. Hs 9788(NDFIP1), Accession No. Hs 9825(CGI-128), Accession No. Hs 9857(DCXR), Accession No. Hs 10326(COPE), Accession No. Hs 10842(RAN. Accession No. Hs 10848(BMS1L), Accession No. Hs 11125(SPCS1), Accession No. Us 11184(UBE2R2), Accession No. Hs 11223(IDH1), Accession No. Hs 11355(TMPO), Accession No. Hs 11463(UMP-CMPK), Accession No. Hs 12013(ABCE1), Accession No. Hs 12084(TUFM), Accession No. Hs 12102(SNX3), Accession No. Hs 12107(BC-2), Accession No. Hs 12109(WDR39), Accession No. Hs 12144(KIAA1033), Accession No. Hs 12152(SRPRB), Accession No. Hs 12272(BECN1), Accession No. Hs 12341(ADAR), Accession No. Hs 12457(NUP133), Accession No. Hs 12865(NSFL1C), Accession No. Hs 13662(MGC5508), Accession No. Hs 14317(NOLA3), Accession No. Hs 14333(FLJ10349), Accession No. Hs 14745(C10orf9), Accession No. Hs 14839(POLR2G), Accession No. Hs 14846(SLC7A1), Accession No. Hs 14894(TGOLN2), Accession No. Hs 15277(C16orf33), Accession No. Hs 15591(COPS6), Accession No. Hs 15738(RAB7), Accession No. Hs 16059(HSPC009), Accession No. Hs 16130(E2-230K), Accession No. Hs 16349(KIAA0431), Accession No. Hs 17118(FLJ11730), Accession No. Hs 17250(MGC4767), Accession No. Hs 17680(FUCA2), Accession No. Hs 17731(FLJ12892), Accession No. Hs 17883(PPM 1G), Accession No. Hs 18069(LGMN), Accession No. Hs 18128(C20orf44), Accession No. Hs 18349(MRPL15), Accession No. Hs 19673(MAF1), Accession No. Hs 20013(P29), Accession No. Hs 20107(KNS2), Accession No. Hs 20157(CDK5RAP3), Accession No. Hs 20521(HRMT1L2), Accession No. Hs 20529(LOC127262), Accession No. Hs 20573(IGF1R), Accession No. Hs 20716(TIMM17A), Accession No. Hs 22393(DENR), Accession No. Hs 22543(UBE3A), Accession No. Hs 22546(CYBASC3), Accession No. Hs 22616(KIAA0664), Accession No. Hs 23033(LOC92912), Accession No. Hs 23111(FARSLA), Accession No. Hs 23978(SAFB), Accession No. Hs 24301(POLR2E), Accession No. Hs 24379(TRAPPC1), Accession No. Hs 24601(FBLN1), Accession No. Hs 24950(RGS5), Accession No. Hs 25155(NET1), Accession No. Hs 25450(SLC29A1), Accession No. Hs 25723(MTVR1), Accession No. Hs 26010(PFKP), Accession No. Hs 26023(FOXJ3), Accession No. Hs 26136(MGC14156), Accession No. Hs 26232(MAN2C1), Accession No. Hs 26403(GSTZ1), Accession No. Hs 26518(TM4SF7), Accession No. Hs 27222(NOLA2), Accession No. Hs 28491(SAT), Accession No. Hs 28914(APRT), Accession No. Hs 29203(GBL), Accession No. Hs 29665(CLSTN1), Accession No. Hs 30011(MGC2963), Accession No. Hs 30026(HSPC182), Accession No. Hs 30345(TRAP1), Accession No. Hs 30954(PMVK), Accession No. Hs 31053(CKAP1), Accession No. Hs 31334(C20orf14), Accession No. Hs 31387(DKFZP564J0123), Accession No. Hs 34045(CDCA4), Accession No. Hs 34576(TAX1BP1), Accession No. Hs 34906(BLOC1S2), Accession No. Hs 35052(TEGT), Accession No. Hs 35828(MARK3), Accession No. Hs 36587(PPP1R7), Accession No. Hs 36927(HSPH1), Accession No. Hs 37616(STRA13), Accession No. Hs 37916(DPP7), Accession No. Hs 42806(Cab45) Accession No. Hs 43297(MTPN), Accession No. Hs 47062(POLR21) Accession No. Hs 50098(NDUFA4), Accession No. Hs 50308(HIP2), Accession No. Hs 50425(TEBP), Accession No. Hs 53066(HSPBP1), Accession No. Hs 54277(FAM50A), Accession No. Hs 54457(CD81), Accession No. Hs 54642(MAT2B), Accession No. Hs 54649(RY1), Accession No. Hs 55682(EIF3S7), Accession No. Hs 55847(MRPL51), Accession No. Hs 58488(CTNNAL1), Accession No. Hs 58992(SMC4L1), Accession No. Hs 59486(HSDL2), Accession No. Hs 61812(PTPN12), Accession No. Hs 65234(DDX27), Accession No. Hs 65238(RNF40), Accession No. Hs 66048(BPY2IP1), Accession No. Hs 66915(C22orf16), Accession No. Hs 68714(SFRS1), Accession No. Hs 9293(HEXB), Accession No. Hs 69554(RNF26), Accession No. Hs 69853(UNR), Accession No. Hs 71465(SQLE), Accession No. Hs 71787(MRPS7), Accession No. Hs 73527(CSNK2B), Accession No. Hs 73722(APEX1), Accession No. Hs 73799(GNAI3), Accession No. Hs 73965(SFRS2), Accession No. Hs 74047(ETFB), Accession No. Hs 74050(FVT1), Accession No. Hs 74137(TMP21), Accession No. Hs 74375(DVL1), Accession No. Hs 74405(YWHAQ), Accession No. Hs 74471(GJA1), Accession No. Hs 74563(OAZ2), Accession No. Hs 74564(SSR2), Accession No. Hs 74576(GDI1), Accession No. Hs 75056(TIMM13), Accession No. Hs 75061(MARCKSL1), Accession No. Hs 75066(TSN), Accession No. Hs 75087(FASTK) Accession No. Hs 75117(ILF2), Accession No. Hs 75133(TFAM), Accession No. Hs 75139(ARPIP2), Accession No. Hs 75189(DAP), Accession No. Hs 75227(NDUFA9), Accession No. Hs 75243(BRD2), Accession No. Hs 75249(ARL6IP), Accession No. Hs 75234(IRP3), Accession No. Hs 75318(TUBA1), Accession No. Hs 75348(PSME1), Accession No. Hs 75438(QDPR), Accession No. Hs 75527(ADSL), Accession No. Hs 75724(COPB2), Accession No. Hs 75798(C20orf111), Accession No. Hs 75841(C12orf8), Accession No. Hs 75890(MBTPS1), Accession No. Hs 75914(RNP24), Accession No. Hs 76111(DAG1), Accession No. Hs 76394(ECHS1), Accession No. Hs 76480(UBL4), Accession No. Hs 76662(ZDHHC16), Accession No. Hs 76686(GPX1), Accession No. Hs 76847(GANAB), Accession No. Hs 77060(PSMB6), Accession No. Hs 77269(GNA12), Accession No. Hs 77313(CDK10), Accession No. Hs 77422(PLP2), Accession No. Hs 77558(HMGN3), Accession No. Hs 77578(USP9X), Accession No. Hs 77793(CSK), Accession No. Hs 77897(SF3A3), Accession No. Hs 77961(HLA-B), Accession No. Hs 77978(DKFZp76112123), Accession No. Hs 78466(PSMD8), Accession No. Hs 78601(UROD), Accession No. Hs 78771(PGK1), Accession No. Hs 78880(ILVBL), Accession No. Hs 78888(DBI), Accession No. Hs 78989(ADH5), Accession No. Hs 79064(DHPS), Accession No. Hs 79081(PPP1CC), Accession No. Hs 79088(RCN2), Accession No. Hs 79101(CCN1), Accession No. Hs 79110(NCL), Accession No. Hs 79322(QARS), Accession No. Hs 79335(SMARCD1), Accession No. Hs 79387(PSMC5), Accession No. Hs 79402(POLR2C), Accession No. Hs 79411(RPA2), Accession No. Hs 79625(C20orf149), Accession No. Hs 80545(RPL37), Accession No. Hs 80919(SYPL), Accession No. Hs 80986(ATP5G1), Accession No. Hs 81328(NFKBIA), Accession No. Hs 81424(SUMO1), Accession No. Hs 81848(RAD21), Accession No. Hs 81964(SEC24C), Accession No. Hs 82201(CSNK2A2), Accession No. Hs 82327(GSS), Accession No. Hs 82719(MGC21416), Accession No. Hs 82793(PSMB3), Accession No. Hs 82887(PPP1R11), Accession No. Hs 82890(DAD1), Accession No. Hs 82916(CCT6A), Accession No. Hs 82927(AMPD2), Accession No. Hs 83190(FASN), Accession No. Hs 83347(AAMP), Accession No. Hs 83383(PRDX4), Accession No. Hs 83734(STX4A), Accession No. Hs 83753(SNRPB), Accession No. Hs 83765(DHFR), Accession No. Hs 83916(NDUPA5), Accession No. Hs 84359(GABARAP), Accession No. Hs 84753(FLJ2442), Accession No. Hs 85155(ZFP36L1), Accession No. Hs 85769(ERBP), Accession No. Hs 85962(DERPC), Accession No. Hs 86131(FADD), Accession No. Hs 87752(MSN), Accession No. Hs 89545(PSMB4), Accession No. Hs 89643(TKT), Accession No. Hs 89649(EPHX1), Accession No. Hs 89781(UBTF), Accession No. Hs 89864(SKIV2L), Accession No. Hs 90061(PGRMC1), Accession No. Hs 90093(HSPA4), Accession No. Hs 90107(ADRM1), Accession No. Hs 90443(NDUPS8), Accession No. Hs 91142(KHSRP), Accession No. Hs 91531(MLLT6), Accession No. Hs 93659(ERP70), Accession No. Hs 93832(LOC54499), Accession No. Hs 95577(CDK4), Accession No. Hs 96530(COX11), Accession No. Hs 96852(FLJ21128), Accession No. Hs 96996(HNRPA0), Accession No. Hs 97616(SH3GL1), Accession No. Hs 97887(RCN1), Accession No. Hs 98751(FUBP3), Accession No. Hs 98791(ACTR1B), Accession No. Hs 102696(MCTS1), Accession No. Hs 102798(PSMA1), Accession No. Hs 103561(ARL6IP4), Accession No. Hs 103834(MGC5576), Accession No. Hs 104839(TIMP2), Accession No. Hs 105547(NPDC1), Accession No. Hs 106185(RALGDS), Accession No. Hs 106876(ATP6V0D1), Accession No. Hs 106909(ANAPC13), Accession No. Hs 107003(CCNB11P1), Accession No. Hs 107101(FLJ31031), Accession No. Hs 107387(C7orf20), Accession No. Hs 107393(C3orf4), Accession No. Hs 108029(SH3BGRL), Accession No. Hs 108080(CSRP1), Accession No. Hs 108371(E2F4), Accession No. Hs 108408(APH-1A), Accession No. Hs 108957(RPS27L), Accession No. Hs 108969(PTD008), Accession No. Hs 109051(SH3BGRL3), Accession No. Hs 109052(C14orf2), Accession No. Hs 109672(SIAT7F), Accession No. Hs 109798(C6orf48), Accession No. Hs 110695(SF3B5), Accession No. HS 110849(ESRRA), Accession No. Hs 111286(MRPS11), Accession No. Hs 111577(ITM2C), Accession No. Hs 111801(ARS2), Accession No. Hs 112058(SIVA), Accession No. Hs 112318(TOMM7), Accession No. Hs 112955(NUDT5), Accession No. Hs 114033(SSR1), Accession No. Hs 114286(CD9), Accession No. Hs 114412(TXNL1), Accession No. Hs 115474(RPC3), Accession No. Hs 115792(EXOSC7), Accession No. Hs 116448(GLS), Accession No. Hs 117176(PABPN1), Accession No. Hs 117715(ST5), Accession No. Hs 118110(BST2), Accession No. Hs 118400(FSCN1), Accession No. Hs 118463(PNPLA2), Accession No. Hs 118638(NME1), Accession No. Hs 118722(FUT8), Accession No. Hs 118964(p66alpha), Accession No. Hs 118983(GSDMDC1), Accession No. Hs 19177(ARP3), Accession No. Hs 119192(H2AFZ), Accession No. Hs 119251(UQCRC1), Accession No. Hs 119591(AP2S1), Accession No. Hs 119598(RPL3), Accession No. Hs 120323(DNAPTP6), Accession No. Hs 121088(NUP153), Accession No. Hs 121549(CDIPT), Accession No. Hs 122363(WIPI-2), Accession No. Hs 122523(SND1), Accession No. Hs 124126(ARPC1A), Accession No. Hs 124147(PBXL11), Accession No. Hs 124246(C10orf119), Accession No. Hs 124366(BBX), Accession No. Hs 125113(CCT8), Accession No. Hs 125867(EVL), Accession No. Hs 125898(GNAS), Accession No. Hs 126497(AEBP2), Accession No. Hs 126774(RAMP), Accession No. Hs 126938(NAPA), Accession No. Hs 127092(DHX38), Accession No. Hs 127249(EAP30), Accession No. Hs 127386(MAMDC2), Accession No. Hs 127764(RAB5C), Accession No. Hs 128065(CTSC), Accession No. Hs 128199(SEPT11), Accession No. Hs 128548WDR1), Accession No. Hs 129634(CINP), Accession No. Hs 129673(EIF4A1), Accession No. Hs 130031(TRIO), Accession No. Hs 130098(DDX23), Accession No. Hs 130293(CROP), Accession No. Hs 130413(TM9SF2), Accession No. Hs 131226(BNIP3L), Accession No. Hs 132497(PRNPIP), Accession No. Hs 132513 HSD17812), Accession No. Hs 133892(TPM1), Accession No. Hs 134074(SLC35E1) Accession No. Hs 134688(PSMD13), Accession No. Hs 135406(CEBPZ), Accession No. Hs 136905(UREB1), Accession No. Hs 136947(RALY), Accession No. Hs 137510(NCOR2), Accession No. Hs 138860(ARHGAP1), Accession No. Hs 139896(MAEA), Accession No. Hs 140452(M6PRBP1), Accession No. Hs 142442(HP1-BP74), Accession No. Hs 143187(DDX49), Accession No. Hs 143766(DRPLA), Accession No. Hs 143873(S100A10), Accession No. Hs 144058(EBSP), Accession No. Hs 144468(MGC3234), Accession No. Hs 144835(EEP1G), Accession No. Hs 144868(VTI1B), Accession No. Hs 144941(MUF1), Accession No. Hs 144949(ZNF313), Accession No. Hs 144980(SCAMP4), Accession No. Hs 145049(PLEKHM2), Accession No. Hs 145442(MAP2K1), Accession No. Hs 145575(UBL3), Accession No. Hs 146070(TPM3), Accession No. Hs 146393(HERPUD1), Accession No. Hs 146602(QP-C), Accession No. Hs 146804(SPIN), Accession No. Hs 146806(CUL1), Accession No. Hs 147433(PCNA), Accession No. Hs 148078(RBAF600), Accession No. Hs 148272(CCM2), Accession No. Hs 148330(ARF4), Accession No. Hs 148340(PTPRG), Accession No. Hs 148670(RHOBTB1), Accession No. Hs 149004(PBXO31), Accession No. Hs 149957(RPS6KA1), Accession No. Hs 149983(PEX14), Accession No. Hs 150107(BIRC6), Accession No. Hs 150540(BC002942), Accession No. Hs 150580(SUI1), Accession No. Hs 150837(TXNDC5), Accession No. Hs 151134(OXA1L), Accession No. Hs 151220(KIAA0992), Accession No. Hs 151413(GMPB), Accession No. Hs 151787(US-116KD), Accession No. Hs 152536(p44S10), Accession No. Hs 153177(RPS28), Accession No. Hs 154023(TXNDC4), Accession No. Hs 154073(SLC35B1), Accession No. Hs 155165(ZFPL1), Accession No. Hs 155218(HNRPUL1), Accession No. Hs 155396(NFE2L2), Accession No. Hs 155829(KIAA0676), Accession No. Hs 156171(PSMC6), Accession No. Hs 156367(RPS29), Accession No. Hs 156667(KIAA1536), Accession No. Hs 157160(MRPS34), Accession No. Hs 157351(PTD004), Accession No. Hs 157379(H2APV), Accession No. Hs 157394(HAGH), Accession No. Hs 159014(PRPF4B), Accession No. Hs 159118(AMD1), Accession No. Hs 159130(RAF1), Accession No. Hs 159161(ARHGDIA), Accession No. Hs 159699(FBXO21), Accession No. Hs 159799(THRAP2), Accession No. Hs 160958(CDC37), Accession No. Hs 161357(PDHB), Accession No. Hs 162032(HBP1), Accession No. Hs 162233(CHD4), Accession No. Hs 162877(PACSIN2), Accession No. Hs 163645(MOCS2), Accession No. Hs 163776(UBE2J I) Accession No. Hs 163893(PICALM), Accession No. Hs 165195(VAPA), Accession No. Hs 166011(CTNND1), Accession No. Hs 166204(PHF1), Accession No. Hs 166463(HNRPU), Accession No. Hs 166924(SEC13L1), Accession No. Hs 166975(SFRS5), Accession No. Hs 167535(SRP54), Accession No. Hs 168073(TRPC4AP), Accession No. Hs 168799(METTL3), Accession No. Hs 16961(DIABLO), Accession No. Hs 169718(CNN2), Accession No. Hs 170107(UQCRFS1), Accession No. Hs 170131(NFIC), Accession No. Hs 170553(CNOT7), Accession No. Hs 170622(CFL1), Accession No. Hs 171626(SKP1A), Accession No. Hs 172550(PTBP1), Accession No. Hs 172755(BRP44L), Accession No. Hs 172928(COL1A1), Accession No. Hs 173024(NYREN18), Accession No. Hs 173162(NOC4), Accession No. Hs 173381(DPYSL2), Accession No. Hs 173464(FKBP8), Accession No. Hs 173611(NDUFS2), Accession No. Hs 173705(LOC401152), Accession No. Hs 173724(CKB), Accession No. Hs 174050(EDF1), Accession No. Hs 174195(IFITM2), Accession No. Hs 175473(AK1), Accession No. Hs 175955(YT521) Accession No. Hs 177530(ATP5E), Accession No. Hs 177766(PARP1), Accession No. Hs 178551(RPL8), Accession No. Hs 178728(MBD3), Accession No. Hs 179986(FLOT1), Accession No. Hs 180141(CFL2), Accession No. Hs 180312(MRPS16), Accession No. Hs 180414(HSPA8), Accession No. Hs 180877(H3F3B), Accession No. Hs 180903(38418-2), Accession No. Hs 180909(PRDX1), Accession No. Hs 180933(CXXC1), Accession No. Hs 181046(DUSP3), Accession No. Hs 181112(MED4), Accession No. Hs 181163(HMGN2), Accession No. Hs 181244(HLA-A), Accession No. Hs 181368(PRPF8), Accession No. Hs 181444(TMEM9), Accession No. Hs 182255(NHP2L1), Accession No. Hs 182626(C22orf5), Accession No. Hs 182885(SLC35B2), Accession No. Hs 183684(EIF402), Accession No. Hs 13706(ADD1), Accession No. Hs 183800(RANGAP1), Accession No. Hs 183850(DCTD), Accession No. Hs 183994(PPP1CA), Accession No. Hs 184062(C20orf24), Accession No. Hs 184211(PMPCB), Accession No. Hs 184233(HSPA9B), Accession No. Hs 184492(ELAVL1), Accession No. Hs 185172(GNB2), Accession No. Hs 185597(SPG7), Accession No. Hs 187199(MALAT1), Accession No. Hs 187635(RPS15A), Accession No. Hs 187763(BRD4), Accession No. Hs 187866(SDFR1), Accession No. Hs 187946(SLC20A1), Accession No. Hs 188501(PAPAH1B2), Accession No. Hs 188614(PLEKHA5), Accession No. Hs 188879(RBM6), Accession No. Hs 188882(NUDT3), Accession No. Hs 189075(PTK9), Accession No. Hs 189119(CXXC5), Accession No. Hs 189329(SMURF1), Accession No. Hs 189716(NDUFAB1), Accession No. Hs 189772(CCT2), Accession No. Hs 190028(GSTO1), Accession No. Hs 190086(MRCL3), Accession No. Hs 190334(RAP1A), Accession No. Hs 190384(COPS4), Accession No. Hs 190722(HSPC142), Accession No. Hs 190904(STRN4), Accession No. Hs 191186(TTC17), Accession No. Hs 191346(SEPT7), Accession No. Hs 191518(DHX9), Accession No. Hs 191987(UBE2J2), Accession No. Hs 192316(CDC2L1), Accession No. Hs 192374(TRA1), Accession No. Hs 192425(EIF3S8), Accession No. Hs 193118(RAI17), Accession No. Hs 193163(BIN1), Accession No. Hs 193491(TUBB6), Accession No. Hs 194329(TCEAL4), Accession No. Hs 194718(ZNF265), Accession No. Hs 195464(FLNA), Accession No. Hs 195642(C17orf27), Accession No. Hs 196983(SSFA2), Accession No. Hs 198281(PKM2), Accession No. Hs 199561(RANBP2), Accession No. Hs 199625(HAX1), Accession No. Hs 200063(HDAC7A), Accession No. Hs 200600(SCAMP3), Accession No. Hs 200804(SDCBP), Accession No. Hs 201253(ch-TOG), Accession No. Hs 201390(WDR45L), Accession No. Hs 201712(GLG1), Accession No. Hs 202011(GK001), Accession No. Hs 202065(VDAC1), Accession No. Hs 202166(HNRPH1), Accession No. Hs 202179(SMN2), Accession No. Hs 203099(KIAA0261), Accession No. Hs 203910(SGTA), Accession No. Hs 204041(AHSA1), Accession No. Hs 204773(MEP50), Accession No. Hs 205163(MRPL3), Accession No. Hs 206500(CTTN), Accession No. Hs 206824(MGC71993), Accession No. Hs 208597(CTBP1), Accession No. Hs 209983(STMN1), Accession No. Hs 210469(ELMO2), Accession No. Hs 210532(KIAA0141), Accession No. Hs 211463(DNM2) Accession No. Hs 211594(PSMC4), Accession No. Hs 211914(NDUFS7), Accession No. Hs 212102(TXNDC7), Accession No. Hs 212395(CIZ1), Accession No. Hs 213061(NUCKS), Accession No. Hs 213470(PSMB7), Accession No. Hs 213541, Accession No. Hs 213666(KIAA0460), Accession No. Hs 213724(SUPT16H), Accession No. Hs 216653(FBXO9), Accession No. Hs 220950(FOXO3A), Accession No. Hs 221847(SLC38A2), Accession No. Hs 222510(DAZAP1), Accession No. Hs 223141(DDX21), Accession No. Hs 224607(SDC1), Accession No. Hs 226007(RDH11), Accession No. Hs 226117(H10), Accession No. Hs 226755(YWHAH), Accession No. Hs 227067(ATAD3A), Accession No. Hs 227253(TOMM70A), Accession No. Hs 227777(PTP4A1), Accession No. Hs 229641(PC4), Accession No. Hs 231295(PITPNC1), Accession No. Hs 231616(HSPC123), Accession No. Hs 232194(KIAA0174), Accession No. Hs 232543(PDCD4), Accession No. Hs 233458(NPYC), Accession No. Hs 233552(CDC2L5), Accession No. Hs 233952(PSMA7), Accession No. Hs 234521(MAPKAPK3), Accession No. Hs 236030(SMARCC2), Accession No. Hs 237536(MGC20781), Accession No. Hs 237971(XTP3TPA), Accession No. Hs 238839(SCYL1), Accession No. Hs 240170(MGC2731), Accession No. Hs 241336(ATPIF1), Accession No. Hs 241543(POLDIP2), Accession No. Hs 241558(ARIH2), Accession No. Hs 241575(GNPTG), Accession No. Hs 241576(DERL1), Accession No. Hs 241579(SERPINH1), Accession No. Hs 242458(SPG21), Accession No. Hs 242947(DGKI), Accession No. Hs 246112(ASCC3L1), Accession No. Hs 246310(ATP5J), Accession No. Hs 246413(CPNE1), Accession No. Hs 246781FBXO11), Accession No. Hs 247077(RHOA), Accession No. Hs 247186(FBS1), Accession No. Hs 247975(HSPD1), Accession No. Hs 248267(MPST), Accession No. Hs 248941(TAF9), Accession No. Hs 49600(DLGAP4), Accession No. Hs 250009(ARL10C), Accession No. Hs 250429(SUPT6H), Accession No. Hs 250758(PSMC3), Accession No. Hs 250899(HSBP1), Accession No. Hs 250905(LOC51234), Accession No. Hs 251531(PSMA4), Accession No. Hs 252457(MVD), Accession No. Hs 252713(TTC15), Accession No. Hs 252967 DKFZp566C0424), Accession No. Hs 253726(PAPOLA), Accession No. Hs 253903(STOM), Accession No. Hs 254042(BAT1), Accession No. Hs 255015(VPS24), Accession No. Hs 255093(PFKL), Accession No. Hs 255932(XRN2), Accession No. Hs 255935(BTG1), Accession No. Hs 255973(CRI1), Accession No. Hs 256301(MGC13170), Accession No. Hs 256549(NUBP2), Accession No. Hs 257008(PLD3), Accession No. Hs 257341(SAV1), Accession No. Hs 57761(SH3BPS), Accession No. Hs 258551(DNPEP), Accession No. Hs 258563(FEZ2), Accession No. Hs 258798 C10orf86), Accession No. Hs 259461(PALM2-AKAP2), Accession No. Hs 260603(PIPSK2B), Accession No. Hs 262823(FLJ10326), Accession No. Hs 265829(ITGA3), Accession No. Hs 268488(KIAA1185), Accession No. Hs 268530(GPS1), Accession No. Hs 268742(C13orf12), Accession No. Hs 268849(GLO1), Accession No. Hs 268939(MATR3), Accession No. Hs 269528(MAK3), Accession No. Hs 269577(PTPRA), Accession No. Hs 269782(GNAQ), Accession No. Hs 269944(MTCH2), Accession No. Hs 270291(ACTN4), Accession No. Hs 270428(SUCLG1), Accession No. Hs 270525(LASS5), Accession No. Hs 270869(ZNP410), Accession No. Hs 271135(ATP5C1), Accession No. Hs 271695(NOB1P), Accession No. Hs 272062(PTPRF), Accession No. Hs 272168(TDE1), Accession No. Hs 272630(ATP6V1D), Accession No. Hs 272927(SEC23A), Accession No. Hs 273077(TMEM14B), Accession No. Hs 274184(TFE3), Accession No. Hs 274772(C15orf15), Accession No. Hs 274873(CARS), Accession No. Hs 275243(S100A6), Accession No. Hs 275775(SEPP1), Accession No. Hs 275865(PCNP), Accession No. Hs 276878(NUP93), Accession No. Hs 277035(MGLL), Accession No. Hs 277517(C11orf2), Accession No. Hs 278186(ARHGEF1), Accession No. Hs 278362(MEA), Accession No. Hs 278426(PDAP1), Accession No. Hs 278429(C9orf78) Accession No. Hs 278500(GNPDA1), Accession No. Hs 278569(SNX17), Accession No. Hs 278573(CD59), Accession No. Hs 278721(SLC39A7), Accession No. Hs 279061(C17orf25), Accession No. Hs 279245(TACC1), Accession No. Hs 279257(PCMT1), Accession No. Hs 279413(POLD1), Accession No. Hs 279529(PX19), Accession No. Hs 279583(DREV1), Accession No. Hs 279623(SEPX1), Accession No. Hs 279640(TPR), Accession No. Hs 279652(MRPLA), Accession No. Hs 279669(TUBG1), Accession No. Hs 279696(SUMF2), Accession No. Hs 279806(DDX5), Accession No. Hs 79836(COMMD9), Accession No. Hs 279920(YWHAB). Accession No. Hs 279929(TMED9), Accession No. Hs 80202(SBF1), Accession No. Hs 280342(PRKAR1A), Accession No. Hs 280378(SNRPB2), Accession No. Hs 282410(CALM1), Accession No. Hs 282700(SPCS2), Accession No. Hs 282901(RNPC2), Accession No. Hs 282998(RBM9), Accession No. Hs 283111(C14orf124), Accession No. Hs 283454(BNIP2), Accession No. Hs 283521(RHEB), Accession No. Hs 283610(APG4B), Accession No. Hs 283652(IDI1), Accession No. Hs 283739(UBQLN4), Accession No. Hs 284208(ANKRD25), Accession No. Hs 284279(HMOX2), Accession No. Hs 284286(MRPS24), Accession No. Hs 284491(PDXK), Accession No. Hs 285354(MAX), Accession No. Hs 285976(LASS2), Accession No. Hs 286221(ARF1), Accession No. Hs 286226(MYO1C), Accession No. Hs 288193(KPNA4), Accession No. Hs 288856(PPDN5), Accession No. Os 288969(HSCARG), Accession No. Hs 289008(C6orf58), Accession No. Hs 289092(COTL1), Accession No. Hs 289123(DCTN2), Accession No. Hs 289271(CYC1), Accession No. Hs 290243(GBF1), Accession No. Hs 290404(SLC25A3), Accession No. Hs 290758(DDB1), Accession No. Hs 291587(ARID1B), Accession No. Hs 292026(EIF4E2), Accession No. Hs 292063(EIF4B), Accession No. Hs 292078(LARP), Accession No. Hs 292265(ZMYND11), Accession No. Hs 292437. Accession No. Hs 292493(G22P1), Accession No. Hs 292524(CCNH), Accession No. Hs 292579(PTDSS1), Accession No. Hs 293563(FLJ12666), Accession No. Hs 295917(ATP6V1B2), Accession No. Hs 297324(TIMP3), Accession No. Hs 298198(CKLFSF3), Accession No. Hs 298280(ATP5A1), Accession No. Hs 298654(DUSP6), Accession No. Hs 299002(FBL), Accession No. Hs 299035(GDI2), Accession No. Hs 300141(RPL39), Accession No. Hs 300684(RCP9), Accession No. Hs 300772(TPM2), Accession No. Hs 300816 RAB1B), Accession No. Hs 300834(GALNT2), Accession No. Hs 301404(RBM3), Accession No. Hs 301412(Ufc1), Accession No. Hs 302742(MRPS6), Accession No. Hs 302903(UBE21), Accession No. Hs 303676(G3BP2), Accession No. Hs 304192(DSTN), Accession No. Hs 304682(CST3), Accession No. Hs 306123(MAGEF1), Accession No. Hs 306242(RANBP9), Accession No. Hs 306329(ZA20D3), Accession No. Hs 306425(IBTK), Accession No. Hs 308122(ITPK1), Accession No. Hs 308340(NUP188), Accession No. Hs 308709(ORP58), Accession No. Hs 309090(SFRS7), Accession No. Hs 309231(C6orf153), Accession No. Hs 309641(RNF11), Accession No. Hs 309753(STARD3NL), Accession No. Hs 309849(C14orf159), Accession No. Hs 310542(TOMM40), Accession No. Hs 310645(RAB1A), Accession No. Hs 311072(MRPS35), Accession No. Hs 311346(CMAS), Accession No. Hs 311609(DDX39), Accession No. Hs 311640(RPS27A), Accession No. Hs 312098(ADAM15), Accession No. Hs 313847(TXNDC1), Accession No. Hs 314263(BAZ2A), Accession No. Hs 314339(EIF3S12), Accession No. Hs 315177(IFRD2), Accession No. Hs 315230(GC20), Accession No. Hs 319334(NASP), Accession No. Hs 321391(MGC4549), Accession No. Hs 321541(RAB11A), Accession No. Hs 323363(APG9L1), Accession No. Hs 323489(FLJ20758), Accession No. Hs 324250(NDUPB2), Accession No. Hs 324844(VKORC1), Accession No. Hs 325650(EHD2), Accession No. Hs 326387(MORF4L2), Accession No. Hs 330384(CORO1C), Accession No. Hs 331431(SCC-12), Accession No. Hs 333388(EEF1D), Accession No. Hs 333579(HSPC152), Accession No. Hs 333786(PSMA2), Accession No. Hs 333823(MRPL13), Accession No. Hs 334017(K-ALPHA-1), Accession No. Hs 334479(TRAF7), Accession No. Hs 334534(GNS), Accession No. Hs 334587(RBPMS), Accession No. Hs 334713(BMSC-UbP), Accession No. Hs 334851(LASP1), Accession No. Hs 334868(PPP2R5E), Accession No. Hs 335003(ANKRD11), Accession No. Hs 335057(SEPT2), Accession No. Hs 335163(KIAA1102), Accession No. Hs 335918(FDPS), Accession No. Hs 337295(STIP1), Accession No. Hs 337766(TXNRD1), Accession No. Hs 339278(COPB), Accession No. Hs 339639(COX7A2L), Accession No. Hs 339697(GRINA), Accession No. Hs 343911(E124), Accession No. Hs 345694(KCMF1), Accession No. Hs 346868(EBNA1BP2), Accession No. Hs 348418(DR1), Accession No. Hs 349656(SCARB2), Accession No. Hs 350194(ZMAT2), Accession No. Hs 350229(CASC3), Accession No. Hs 350268(IRF2BP2), Accession No. Hs 350364(C9orf100S), Accession No. Hs 350927(SLC25A6), Accession No. Hs 351099(FLJ10241), Accession No. Hs 351296(LOCS1035), Accession No. Hs 351316(TM4SF1), Accession No. Hs 351474(PAQR4), Accession No. Hs 351680. Accession No. Hs 351875(COX6C), Accession No. Hs 352341(STCH), Accession No. Hs 352656(GHITM), Accession No. Hs 352768(PSMB1), Accession No. Hs 354056(POR), Accession No. Hs 355141(TNIP1), Accession No. Hs 355606(MGC23909), Accession No. Hs 355643(RNPS1), Accession No. Hs 355708(FL20507), Accession No. Hs 355750(MGC5306), Accession No. Hs 355753(DKFZp86M1819), Accession No. Hs 355867(MARS), Accession No. Hs 355927(VDAC2), Accession No. Hs 355934(SFPQ), Accession No. Hs 355983(BZW1), Accession No. Hs 356061(MAP1LC3B), Accession No. Hs 356096(FLJ10350), Accession No. Hs 356190(UBB), Accession No. Hs 356270(SDHD), Accession No. Hs 356285(HMGN1), Accession No. Hs 356331(PPIA), Accession No. Hs 356366(RPS2), Accession No. Hs 356371(RPL28), Accession No. Hs 356377(LOC149603), Accession No. Hs 356467(MGC2747), Accession No. Hs 356501(PHF6), Accession No. Hs 356502(RPLP1), Accession No. Hs 356549(SNRPD3), Accession No. Hs 356630(NUTF2), Accession No. Hs 356647(SNX6), Accession No. Hs 356654(PSMC1), Accession No. Hs 567660, Accession No. Hs 356769(MAN2B1), Accession No. Hs 356799, Accession No. Hs 357901(SOX4), Accession No. Hs 362728(SEP15), Accession No. Hs 365116(U2AF1), Accession No. Hs 368084(LRPPRC), Accession No. Hs 368149(CCT7), Accession No. Hs 368157(PYGB), Accession No. Hs 368240(DYRK1A), Accession No. Hs 68264(PPP2R5C), Accession No. Hs 368376(SRPR), Accession No. Hs 368402(LOCS1337), Accession No. Hs 368404(EXT2), Accession No. Hs 368525(PDLIM1), Accession No. Hs 368598(LEREPO4), Accession No. Hs 368934(MGC40157), Accession No. Hs 368985(TRIP12), Accession No. Hs 369017(RAB2), Accession No. Hs 369052(SELT), Accession No. Hs 369068(DNCLI2), Accession No. Hs 369125(PSMD14), Accession No. Hs 369285(DKLZP4341B168), Accession No. Hs 369356(MLL5), Accession No. Hs 369606(CPSF6), Accession No. Hs 369607(GAK), Accession No. Hs 369614(COPS2), Accession No. Hs 369615(FIJ20551), Accession No. Hs 369761(DAZAP2), Accession No. Hs 369785(MGC2749), Accession No. Hs 369920(RAP1B), Accession No. Hs 370024(SEC31L1), Accession No. Hs 370247(APLP2), Accession No. Hs 370292(BCCIP), Accession No. Hs 370312(FNTA), Accession No. Hs 370408(COMT), Accession No. Hs 370581(CAP1), Accession No. Hs 370770(XPO1), Accession No. Hs 370771(CDKN1A), Accession No. Hs 370895(RPN2), Accession No. Hs 370927(PRO1855), Accession No. Hs 370937(TAPBP), Accession No. Hs 371001(EIF3S9), Accession No. Hs 371416(CARM1), Accession No. Hs 371563(RAB14), Accession No. Hs 371788(DKPZP547E1010), Accession No. Hs 371889(ATP1A1), Accession No. Hs 372003(C9orf10), Accession No. Hs 372050(SMAP-5), Accession No. Hs 372286(CUL3), Accession No. Hs 372331(SPTAN1), Accession No. Hs 372541(KBTBD2), Accession No. Hs 372616(ARL1), Accession No. Hs 372914(NDRG1), Accession No. Hs 373550(TGIF), Accession No. Hs 373741(HM13), Accession No. Hs 373763(HNRPR), Accession No. Hs 373952(CAMTA2), Accession No. Hs 373959(VGLL4), Accession No. Hs 374043(ASXL1), Accession No. Hs 374257(SIAT4A), Accession No. Hs 374378(CKS1B), Accession No. Hs 374477(EWSR1), Accession No. Hs 374503(MORF4L1), Accession No. Hs 374588(RPL17), Accession No. Hs 374596(TFT1), Accession No. Hs 374650(IFITM3), Accession No. Hs 374973(PRPF4), Accession No. Hs 375001(TLN1), Accession No. Hs 375108(CD24), Accession No. Hs 375217(RNF31), Accession No. Hs 376046(BTN3A2), Accession No. Hs 376933(GUK1), Accession No. Us 377155(LYRIC), Accession No. Hs 378103(RPS5), Accession No. Hs 378532(HBS1L), Accession No. Hs 378808(eIF2A), Accession No. Hs 380403(PCGF4), Accession No. Hs 380774(DDX3X), Accession No. Hs 380953(RPL38). Accession No. Hs 380973(SUMO2), Accession No. Hs 381008(HLA-E), Accession No. Hs 381058(KIAA016), Accession No. Hs 381072(PPIF), Accession No. Hs 381123(RPL21), Accession No. Hs 381126(RPS14), Accession No. Hs 381189(CBX3), Accession No. Hs 381219. Accession No. Hs 381256(GLTP), Accession No. Hs 382044(MRPS2), Accession No. Hs 382168(NCOA3), Accession No. Hs 385913(ANP32E), Accession No. Hs 385986(UBE2B). Accession No. Hs 386434(ANXA7), Accession No. Hs 386465(CHERP), Accession No. Hs 386939(USP7), Accession No. Hs 387208(FAU), Accession No. Hs 387804(PABPC1), Accession No. Hs 388034(RXRB), Accession No. Hs 38864(ATP6V1G1) Accession No. Hs 388664(RPL11), Accession No. Hs 388739(XRCC5), Accession No. Hs 388927(YY1), Accession No. Hs 388956(C19orf22), Accession No. Hs 389037(MCM3APAS), Accession No. Hs 389107(ATP6V0C), Accession No. Hs 389171(PINK1), Accession No. Hs 389649(DDX48), Accession No. Hs 389734(TCEAL8), Accession No. Hs 389996(CHCHD2), Accession No. Hs 390667(OSTK1), Accession No. Hs 393201(ACTR2), Accession No. Hs 395482(PTK2), Accession No. Hs 396644(PAIP2), Accession No. Hs 396740(NIP30), Accession No. Hs 396783(SLC9A3R1), Accession No. Hs 397609(RPS16), Accession No. Hs 399800(AKAP8L), Accession No. Hs 400295(RPL30), Accession No. Hs 401509(RBM10), Accession No. Hs 401903(COX5A), Accession No. Us 401929(RPL10), Accession No. Hs 403917(STK24), Accession No. Hs 404056(EIF3S1), Accession No. Hs 404321(GARS), Accession No. Hs 405144(SFRS3), Accession No. Hs 405410(OGT), Accession No. Hs 405514(LOC284058), Accession No. Hs 405590(EIF3S6), Accession No. Hs 405880(MRPS21), Accession No. Hs 405942(LOC339229), Accession No. Hs 406062(NDUFA11), Accession No. Hs 406068(UBE2M), Accession No. Hs 406096(ZA20D2), Accession No. Hs 406277(SF3A1), Accession No. Hs 406300(RPL23), Accession No. Hs 406423(SF3B2), Accession No. Hs 406510(ATP5B), Accession No. Hs 406520(LOC389541), Accession No. Hs 406534(HMG20B), Accession No. Hs 406590(PGR1), Accession No. Hs 406620(RPS10), Accession No. Hs 406683(RPS15), Accession No. Hs 406799(RAB18), Accession No. Hs 406840(SLC35A4), Accession No. Hs 407368(C19orf13), Accession No. Hs 407580(PKP4), Accession No. Hs 407995(MIF), Accession No. Hs 408018(RPL36), Accession No. Hs 408073(RPS6), Accession No. Hs 408236(TXNL5), Accession No. Hs 408257(NDUFS6), Accession No. Hs 408293(KAB), Accession No. Hs 408324(FLJ10769), Accession No. Hs 408428(CHES1), Accession No. Hs 408581(SVIL), Accession No. Hs 408909(GOLPH3), Accession No. Hs 409140(ATP5O), Accession No. Hs 409223(SSR4), Accession No. Hs 409230(AGPAT1), Accession No. Hs 409834(PHPT1), Accession No. Hs 410197(NDH30), Accession No. Hs 410596(HAN11), Accession No. Hs 410817(RPL13), Accession No. Hs 411480(AUP1), Accession No. Hs 411641(EIF4EBP1), Accession No. Hs 411847(MAPK6), Accession No. Hs 412103(EFHA1), Accession No. Hs 412117(ANXA6), Accession No. Hs 412196(ESRRBL1), Accession No. Hs 412433(ALP), Accession No. Hs 412468(KLHDC3), Accession No. Hs 412842(C10orf7), Accession No. Hs 413036(WBSCR22), Accession No. Hs 413482(C21orf33), Accession No. Hs 414579(SCOTIN), Accession No. Hs 415342(KIAA1049), Accession No. Hs 416049(TNPO2), Accession No. Hs 416436(TRIM50A), Accession No. Hs 417004(S100A11), Accession No. Hs 417029(DERP6), Accession No. Hs 418123(CTSL), Accession No. Hs 418175(VPS28), Accession No. Hs 418233(MRPL24), Accession No. Hs 418450(MRPL11), Accession No. Hs 418533(BUB3), Accession No. Hs 418668(ATP5D), Accession No. Hs 419640(PARK7), Accession No. Hs 420269(COL6A2), Accession No. Hs 420272(H2AFY), Accession No. Hs 421257(RPL7), Accession No. Hs 421509(CCT4), Accession No. Hs 422113(ZNF511), Accession No. Hs 423935(RDBP), Accession No. Hs 423968(TTC11), Accession No. Hs 424126(SERF2), Accession No. Hs 424908(LSM5), Accession No. Hs 425777(UBE2L6), Accession No. Hs 426296(C10orf104), Accession No. Hs 426359(DKFp564J157), Accession No. Hs 429052(ITGB1), Accession No. Hs 429353(SEPN1), Accession No. Hs 429581(RTN4), Accession No. Hs 429819(PITPNA), Accession No. Hs 429839(MGC23908), Accession No. Hs 430425(GNB1), Accession No. Hs 430551(IQGAP1), Accession No. Hs 430606(CS), Accession No. Hs 430657(ARF5), Accession No. Hs 430733(CLNS1A), Accession No. Hs 431101(GNG12), Accession No. Hs 431367(C6orf55), Accession No. Hs 431498(FOXPI), Accession No. Hs 431550(MAP4K4), Accession No. Hs 431668(COX6B1), Accession No. Hs 431850(MAPK1), Accession No. Hs 431861(PPP5C), Accession No. Hs 431926 NFKB1), Accession No. Hs 432121(PRDX2), Accession No. Hs 432438(EML4), Accession No. Hs 432491(ESD), Accession No. Hs 432690(SLC39A9), Accession No. Hs 432760(CAPZB), Accession No. Hs 432898(RPL4), Accession No. Hs 432976(NRIH2), Accession No. Hs 433154(PISCR3), Accession No. Hs 433201(CDK2AP1), Accession No. Hs 433222(NPC2), Accession No. Hs 433291(ARD1), Accession No. Hs 433307(BCKDHA), Accession No. Hs 433343(SRRM2), Accession No. Hs 433345, Accession No. Hs 433419(COX411), Accession No. Hs 433512(ACTR3), Accession No. Hs 433529(RPS11), Accession No. Hs 433540(DNAJC8), Accession No. Hs 433573(Bles03), Accession No. Hs 433615(TUBB2), Accession No. Hs 433701(RPL37A), Accession No. Hs 433722(K1AA1967), Accession No. Hs 33732(CLK1), Accession No. Hs 433750(EIF4G1), Accession No. Hs 433759(BANF1), Accession No. Hs 433795(SHC1), Accession No. Hs 433863(PBP), Accession No. Hs 433901(COX8A), Accession No. Hs 433951(GPX4), Accession No. Hs 434102(HMGB1), Accession No. Hs 434207(HARS2), Accession No. Hs 434219(ANKHD1), Accession No. Hs 434401(ZNP638), Accession No. Hs 434937(PPIB), Accession No. Hs 434953(HMGB2), Accession No. Hs 434980(APP), Accession No. Hs 435044(TBC1D22A), Accession No. Hs 435064(KIAA1608), Accession No. Hs 435120(KIF1C), Accession No. Hs 435136(TXN), Accession No. Hs 435166(LBR), Accession No. Hs 435231(ZFR), Accession No. Hs 435255(UBXD1), Accession No. Hs 435326(ACTL6A), Accession No. Hs 435512(PFP3CA), Accession No. Hs 435535(ZNF395), Accession No. Hs 435610(WAC), Accession No. Hs 435741(GCSH), Accession No. Hs 435759(THAP4), Accession No. Hs 435771(API5), Accession No. Hs 435841(TNRC15), Accession No. Hs 435850(LYPLA1), Accession No. Hs 435933(PHF10), Accession No. Hs 435948(ATAD1), Accession No. Hs 435952(CDK5RAP1), Accession No. Hs 435974(MTHFD1), Accession No. Hs 436035(TUBA6), Accession No. Hs 436093(BAT2), Accession No. Hs 4362041ZNF289), Accession No. Hs 436298(EMP1), Accession No. Hs 436405(IDH3B), Accession No. Hs 436437(ALDH2), Accession No. Hs 436446(ARMET), Accession No. Hs 436500(DBNL), Accession No. Hs 436568(CD74), Accession No. Hs 436578(POLR2F), Accession No. Hs 436657(CLU), Accession No. Hs 436687(SET), Accession No. Hs 436803(VBP1), Accession No. Hs 437056(SUPT5H), Accession No. Hs 437060(CYCS), Accession No. Hs 437110(ANXA2), Accession No. Hs 437178(ACADVL), Accession No. Hs 437256(GRINL1A), Accession No. Hs 437277(MGAT4B), Accession No. Hs 437367(GBAS), Accession No. Hs 437388(PIGT), Accession No. Hs 437403(PP), Accession No. Hs 437594(RPLP2, Accession No. Hs 437638(XBP1), Accession No. Hs 437779(C11orf10), Accession No. Hs 437831(C14orf32), Accession No. Hs 438072(UNC84A), Accession No. Hs 438219(GPS2), Accession No. Hs 438429(RPS19), Accession No. Hs 438678(TALDO1), Accession No. Hs 438720(MCM7), Accession No. Hs 438970(TBL1XR1), Accession No. Hs 438974(CUTL1), Accession No. Hs 439480(RBM5), Accession No. Hs 439481(SUPT4H1), Accession No. Hs 439548(FLJ22875), Accession No. Hs 439552, Accession No. Hs 439815(HBXIP), Accession No. Hs 440382(RFP), Accession No. Hs 440544(CLIC4), Accession No. Hs 440599(DDX1), Accession No. Hs 440604(PSMD7), Accession No. Hs 440899(TTYH3), Accession No. Hs 440932(SEPT9), Accession No. Hs 440960(RAD23A), Accession No. Hs 440961(CAST), Accession No. Hs 441072(POLR2L), Accession No. Hs 441550(C20orf22, Accession No. Hs 442344(IRS2), Accession No. Hs 442798(RNF10), Accession No. Hs 443134(GBA2), Accession No. Hs 443379(PSMD11), Accession No. Hs 443837(NPEPPS), Accession No. Hs 443914(SOD1), Accession No. Hs 444279(DKFZp761C169), Accession No. Hs 444356(GRB2), Accession No. Hs 444468(CTDSP1), Accession No. Hs 444472(SDHC), Accession No. Hs 444569(VMP1), Accession No. Hs 444673(CRR9. Accession No. Hs 444724(AZI2), Accession No. Hs 444818(CGGBP1), Accession No. Hs 444931(CRSP6), Accession No. Hs 444969(C2orf4), Accession No. Hs 444986(METAP2), Accession No. Hs 445081(NS5ATP13TP2), Accession No. Hs 445351(LGALS1), Accession No. Hs 445394(VPS29), Accession No. Hs 445498(SKIIP), Accession No. Hs 445511(RIOK3), Accession No. Hs 445570(CD63), Accession No. Hs 445803(DC2), Accession No. Hs 445893(KHDRBS1), Accession No. Hs 445977(GTF3A), Accession No. Hs 446017(WSB1), Accession No. Hs 446091(WTAP), Accession No. Hs 446123(CAPZA2), Accession No. Hs 446149(LDHB), Accession No. Hs 446260(PSMA6), Accession No. Hs 446336(PXN), Accession No. Hs 446345(FTH1), Accession No. Hs 446414(CD47), Accession No. Hs 446427(OAZ1), Accession No. Hs 446445(YIP1) Accession No. Hs 446450(ITM2B), Accession No. Hs 446574(TMSB10), Accession No. Hs 446588(RPS13), Accession No. Hs 446623(HNRPL), Accession No. Hs 446628(RPS4X), Accession No. Hs 446641(ARAF), Accession No. Hs 446852(EIF3S6IP), Accession No. Hs 447477(ST13), Accession No. Hs 447492(PGAM1), Accession No. Hs 447547(VPS35), Accession No. Hs 48226(RPLP0), Accession No. Hs 448588(NGFRAP1), Accession No. Hs 448646(RPL27A), Accession No. Hs 448879, Accession No. Hs 449114(HNRPC), Accession No. Hs 449171(HNRPK), Accession No. Hs 454534(USF2), Accession No. Hs 454699(IL6ST), Accession No. Hs 456507(PKD1-like), Accession No. Hs 456557(FLJ10597), Accession No. Hs 438320(DC12), Accession No. Hs 458358(TSPYL1), Accession No. Hs 458414(IFITM1), Accession No. Hs 458458(C19orf27), Accession No. Hs 458747(ANP32A), Accession No. Hs 459106(OAZ1N), Accession No. Hs 459149(BTBD1), Accession No. Hs 459174(FLJ23790), Accession No. Hs 459211(AKAP13), Accession No. Hs 459596(MPG), Accession No. Hs 459649(CLCN7), Accession No. Hs 459927(PTMA), Accession No. Hs 459940(LITAF), Accession No. Hs 460238(SH3GLB2), Accession No. Hs 460317(ALS4), Accession No. Hs 460336(GGA2), Accession No. Hs 460468(XPO6), Accession No. Hs 460499(ATXN2L), Accession No. Hs 460574(LOC124446), Accession No. Hs 460923(CNOT1), Accession No. Hs 460929(0(12), Accession No. Hs 460978(APPBP1), Accession No. Hs 461047(G6PD), Accession No. Hs 461131(CYB5-M), Accession No. Hs 461361(CFDP1), Accession No. Hs 461379(GABARAPL2), Accession No. Hs 461722(HSPC176) Accession No. Hs 461777(PCOLN3), Accession No. Hs 461896(CRK), Accession No. Hs 461925(RPA1), Accession No. Hs 462035(UBE2G1), Accession No. Hs 462086(RIP), Accession No. Hs 462306(UBE2S), Accession No. Hs 462316(TTC19), Accession No. Hs 462492(USP22), Accession No. Hs 462550(PIGS), Accession No. Hs 462956(PPARBP), Accession No. Hs 462998(IGFBP4), Accession No. Hs 463010(SMARCE1), Accession No. Hs 463035(FKBP10), Accession No. Hs 463041(RERE), Accession No. Hs 463059(STAT3), Accession No. Hs 463295(CDC27), Accession No. Hs 463506(AKAP1), Accession No. Hs 463702(BCAS3), Accession No. Hs 463797(C1orf33), Accession No. Hs 464071(PGD), Accession No. Hs 464137(ACOX1), Accession No. Hs 464210(SYNGR2), Accession No. Hs 464336(P4HB), Accession No. Hs 464438(AGTRAP), Accession No. Hs 464472(MRLC2), Accession No. Hs 464595(PPP4R1), Accession No. Hs 464652(TNFSF5IP1), Accession No. Hs 464912(P5IRS), Accession No. Hs 465224(NARS), Accession No. Hs 465374(EFHD2), Accession No. Hs 465498(TXNL4A), Accession No. Hs 465529(MIDN), Accession No. Hs 465543(BTBD2), Accession No. Hs 465627(MAP2K2), Accession No. Hs 465645(C19orf0), Accession No. Hs 465808(HNRPM), Accession No. Hs 465849(PIN1), Accession No. Hs 465924(SDHB), Accession No. Hs 466044(PKN1), Accession No. Hs 466088(TPM4), Accession No. Hs 466148(NR2F6), Accession No. Hs 466471(GPI), Accession No. Hs 466693(SIRT2), Accession No. Hs 466766(LTBP4), Accession No. Hs 466775(SNRPA), Accession No. Hs 467084(EIF4G3), Accession No. Hs 467097(SNRP70), Accession No. Hs 467192(PPP2R1A), Accession No. Hs 467279(LENG4), Accession No. Hs 467284(RPS9), Accession No. Hs 467408(TRIM28), Accession No. Hs 467637(CDC42), Accession No. Hs 467696(HPCAL1), Accession No. Hs 467701(ODC1), Accession No. Hs 467807(LAPTM4A), Accession No. Hs 467824(PUM2), Accession No. Hs 467960(RAB10), Accession No. Hs 468018(PPP1CB), Accession No. Hs 468415(PIGF), Accession No. Hs 468442(CALM2), Accession No. Hs 468760(AFTIPHILIN), Accession No. Hs 469022(DGUOK), Accession No. Hs 469171(DKFZP564D0478), Accession No. Hs 469331(STARD7), Accession No. Hs 469820(RALB), Accession No. Hs 469863(YWHAZ), Accession No. Hs 469925(FLJ14346), Accession No. Hs 469970(SFRS4) Accession No. Hs 470091(YWHAE), Accession No. Hs 470233(ARL5), Accession No. Hs 470417. Accession No. Hs 470477(FTP4A2), Accession No. Ha 470577(EIF2S2), Accession No. Hs 470588(KPNA6), Accession No. Hs 470943(STAT1), Accession No. Hs 471011(SF3B1), Accession No. Hs 471104(NOP5/NOP58), Accession No. Hs 471207(NDUFS1), Accession No. s 471441(PSMB2), Accession No. Hs 471461(ACSL3), Accession No. Hs 471593(CAB39), Accession No. Hs 471768(MGC4796), Accession No. Hs 471818(M11S1), Accession No. Hs 471851(HDLBP), Accession No. Hs 471873(DTYMK), Accession No. Hs 471933(PKBP1A), Accession No. Hs 471975(C2orf16), Accession No. Hs 472010(PRNP), Accession No. Hs 472024(C20orf30), Accession No. Hs 472031(UBB2D3), Accession No. Hs 472038(CG1-94), Accession No. Hs 472056(SYNCRIP), Accession No. Hs 472119(MKKS), Accession No. Hs 472185(NDUFS5), Accession No. Hs 472213(RRBP1), Accession No. Hs 472330(C20orf3), Accession No. Hs 472475(MACF1) Accession No. Hs 472535(AKIP), Accession No. Hs 472558(SDBCAG84), Accession No. Hs 472651(BLCAP), Accession No. Hs 472737(TOP1), Accession No. Hs 473296(TPD2L2), Accession No. Hs 473583(NSEP1), Accession No. Hs 473648(GART), Accession No. Hs 473721(SLC2A1), Accession No. Hs 473761(RTN3), Accession No. Hs 473788(OTUB1), Accession No. Hs 474005(SUMO3), Accession No. Hs 474010(PTTG1IP), Accession No. Hs 474053(COL6A1), Accession No. Hs 474083(B4GALT2), Accession No. Hs 474213(UFD1L), Accession No. Hs 474584(AKR1A1, Accession No. Hs 474643(HSPC117), Accession No. Hs 474751(MYH9), Accession No. Hs 474833(CSNK1E), Accession No. Hs 474914(RUTBC3), Accession No. Hs 474938(SLC25A17), Accession No. Hs 474949(RBX1), Accession No. Hs 474982(ACO2), Accession No. Hs 475125(ATXN10), Accession No. Hs 475319(LRRFIP2), Accession No. Hs 475382(FL122405), Accession No. Hs 475392(LOC55831), Accession No. Hs 475663(RAB5A), Accession No. Hs 475733(TOP2B), Accession No. Hs 475812(SIMP), Accession No. Hs 476018(CTNNB1), Accession No. Hs 476033(TLP19), Accession No. Hs 476179(SMARCC1), Accession No. Hs 476221(IHPK2), Accession No. Hs 76231(IMPDH2), Accession No. Hs 476308(ALAS1), Accession No. Hs 476365(SCP2), Accession No. Hs 476448(FLNB), Accession No. Hs 476706(MRPL37), Accession No. Hs 476930(DKFZP564O123), Accession No. Hs 477157(DULLARD), Accession No. Hs 477789(ATP1B3), Accession No. Hs 477892(GYG), Accession No. Hs 478000(MBNL1), Accession No. Hs 478044(PA2G4), Accession No. Hs 478553(EIF4A2), Accession No. Hs 479208(FBXL5), Accession No. Hs 479264(LAP3), Accession No. Hs 479634(SLC30A9), Accession No. Hs 479693(SFRS11), Accession No. Hs 479728(GAPD), Accession No. Hs 479747(BCAR1), Accession No. Hs 479814(POLR2B), Accession No. Hs 480073(HNRPD), Accession No. Hs 480311(PDLIM5), Accession No. Hs 480465(SCYE1), Accession No. Hs 80653(ANXA5), Accession No. Hs 481571(UQCRH), Accession No. Hs 481720(MYO10), Accession No. Hs 481898(KAT3), Accession No. Hs 482144(RPL26), Accession No. Hs 482363(SLC30A5), Accession No. Hs 482526(TINP1), Accession No. Hs 482868(KIAA0372), Accession No. Hs 483036(PJA2), Accession No. Hs 483067(C8orf13), Accession No. Hs 483305(HINT1), Accession No. Hs 483408(PPP2CA), Accession No. Hs 483454(CNN3), Accession No. Hs 483486(JMJD1B), Accession No. Hs 484138(FBXW11), Accession No. Hs 484188(ATP6V0E), Accession No. 484242(ETEA), Accession No. Hs 484288(DDX41), Accession No. Hs 484363(RNF130), Accession No. Hs 484551(CPM), Accession No. Hs 484813(DEK), Accession No. Hs 485155(RPL35), Accession No. Hs 485195(SORT1), Accession No. Hs 485246(PSMA5), Accession No. Hs 485262(MTCH1. Accession No. Hs 485365(AHCYL1), Accession No. Hs 485616(DST), Accession No. Hs 486542(BCLAF1), Accession No. Hs 487027(VIL2), Accession No. Hs 487054(TCP1), Accession No. Hs 487635(BZW2), Accession No. Hs 487774(HNRPA2B1), Accession No. Hs 488171(KIAA068), Accession No. Hs 488181(OGDH), Accession No. Hs 488307(DKFZP564K0822), Accession No. Hs 488478(FLJ10099), Accession No. Hs 488671(BAZ1B), Accession No. Hs 489207(ASNS), Accession No. Hs 489284(ARPC1B), Accession No. Hs 489287(CPSF4), Accession No. Hs 489336(SYAP1), Accession No. Hs 489615(PBEF), Accession No. Hs 490203(CALD1), Accession No. Hs 490394(SSBP1), Accession No. Hs 490415(ZYX), Accession No. Hs 490745(DNAJB6), Accession No. Hs 490795(CHR2SYT), Accession No. Hs 490874(MTX1), Accession No. Hs 491336(ELP3), Accession No. Hs 491359(LMNA), Accession No. Hs 491440(PPP2CB), Accession No. Hs 491494(CCT3), Accession No. Hs 491597(VDAC3), Accession No. Hs 491695(UBE2V2), Accession No. Hs 491745(TCEA1), Accession No. Hs 491988(TRAM 1), Accession No. Hs 492236(WDR42A), Accession No. Hs 492314(LAPTM4B), Accession No. Hs 492445(EDD), Accession No. Hs 492599(EIP3S3). Accession No. Hs 492805(CGI-07), Accession No. Hs 493362(AK3L1), Accession No. Hs 493750(WDR40A), Accession No. Hs 494173(ANXA1), Accession No. Hs 494419(LAMP1), Accession No. Hs 494457(NINJ1), Accession No. Hs 494604(ANP32B), Accession No. Hs 494614(XTP2), Accession No. Hs 494691(PFN1), Accession No. Hs 494700(CDW92), Accession No. Hs 494985(FBXW2), Accession No. Hs 495039(NDUPA8), Accession No. Hs 495349(KIAA0515), Accession No. Hs 495471(PMPCA), Accession No. Hs 495605(CD99), Accession No. Hs 495851(MC4825), Accession No. Hs 495960(ATP6AP2), Accession No. Hs 496068(PCTK1), Accession No. Hs 496098(DKFZp761A052), Accession No. Hs 496271. Accession No. Hs 496487(ATF4), Accession No. Hs 496646(IL13RA1), Accession No. Hs 496684(LAMP2), Accession No. Hs 497183(IVNS1ABP), Accession No. Hs 497599(WARS), Accession No. Hs 497692(C1orf48), Accession No. Hs 497893(ENAH), Accession No. Hs 498239(FH), Accession No. Hs 498313(ADSS), Accession No. Hs 498317(PNAS-4), Accession No. Hs 498455(KIAA0217), Accession No. Hs 498548(RBM17), Accession No. Hs 498727(DHCR24), Accession No. Hs 499145(YME1L1), Accession No. Hs 499158(GGA1), Accession No. Hs 499594(TIMM23), Accession No. Hs 499833(C10orf74), Accession No. Hs 499891(HNRPH3), Accession No. Hs 499925(VPS26), Accession No. Hs 499960(SARA1), Accession No. Hs 500067(PP3CB), Accession No. Hs 500101(VCL), Accession No. Hs 500375(ENTPD6), Accession No. Hs 500409(GLUD1), Accession No. Hs 500546(IDE), Accession No. Hs 500674(SMBP), Accession No. Hs 500775(ZNF207), Accession No. Hs 500842(MGEA5), Accession No. Hs 500874(CUEDC2), Accession No. Hs 501012(ADD3), Accession No. Hs 501023(MXI1), Accession No. Hs 501203(TIAL1), Accession No. Hs 501293(BSG), Accession No. Hs 501309(CIRBP), Accession No. Hs 501353(PLEKHJ1), Accession No. Hs 501376(UROS), Accession No. Hs 501420(NCLN), Accession No. Hs 501629(IER2), Accession No. Hs 501684(NAPIL4), Accession No. Hs 501735(STIM1), Accession No. Hs 501853(C11orf15), Accession No. Hs 501924(USP47), Accession No. Hs 501991(MLSTD2), Accession No. Hs 502302(CAT), Accession No. Hs 502328(CD44), Accession No. Hs 502461(DGKZ), Accession No. Hs 502528(NDUFS3), Accession No. Hs 502630(C11orf31), Accession No. Hs 502659(RHOC), Accession No. Hs 502705(PRP19), Accession No. Hs 502745(FADS2), Accession No. Hs 502769(SLC3A2), Accession No. Hs 502773(MTCBP-1), Accession No. Hs 502823(PRDX5), Accession No. Hs 502829(SF1), Accession No. Hs 502836(ARL2), Accession No. Hs 502842(CAPN1), Accession No. Hs 502872(MAP3K11), Accession No. Hs 502876(RHOB), Accession No. Hs 503093(ZFP36L2), Accession No. Hs 503222(RAB6A), Accession No. Hs 503251(PME-1), Accession No. Hs 503597(HSPC148), Accession No. Hs 503709(PORIMIN), Accession No. Hs 503716(MGC2714), Accession No. Hs 503787(DARS), Accession No. Hs 504237(ITM1), Accession No. Hs 504517(RPS27), Accession No. Hs 504613(PTMS), Accession No. Hs 504620(REA), Accession No. Hs 504687(MYL9), Accession No. Hs 504828(DDX47), Accession No. Hs 504895(STRAP), Accession No. Hs 505033(KRAS2), Accession No. Hs 505059(PSMD4), Accession No. Hs 505625(C12orf10), Accession No. Hs 505652(COPZ1), Accession No. Hs 505676(C1P29), Accession No. Hs 5053705(MYL6), Accession No. Hs 505806(PBXIP1), Accession No. Hs 505824(CGI-51), Accession No. Hs 506215(RARS), Accession No. Hs 506325(NUDT4), Accession No. Hs 06759(ATP2A2), Accession No. Hs 506861(DDX54), Accession No. Hs 507074(KIAA0152), Accession No. Hs 507162(FUL12750), Accession No. Hs 507584(MGC9850), Accession No. Hs 507680(PFAAP5), Accession No. Hs 507910(PGRMC2), Accession No. Hs 507916(TGFB114), Accession No. Hs 508010(FNDC3A), Accession No. Hs 508644(FLJ10154), Accession No. Hs 509163(KIAA1181), Accession No. Hs 509226(FKBP3), Accession No. Hs 509264(KLHDC2), Accession No. Hs 509414(KTN1), Accession No. Hs 509622(ROL2), Accession No. Hs 509736(HSPCB), Accession No. Hs 509791(ERH), Accession No. Hs 509909(NUMB), Accession No. Hs 510087(ENSA), Accession No. Hs 510328(DDX24), Accession No. Hs 510402(MCP), Accession No. Hs 511067(FLJ10579), Accession No. Hs 511138(DKFZP564G2022), Accession No. Hs 511149(SNAP23), Accession No. Hs 511425(SRP9), Accession No. Hs 511504(TC12), Accession No. Hs 511862, Accession No. Hs 511952(CBX6), Accession No. Hs 512005(ARPC3), Accession No. Hs 512465(SURF4), Accession No. Hs 512525(RPS17), Accession No. Hs 512607(MIRI6), Accession No. Hs 512640(PRKCSH), Accession No. Hs 512661(KIAA1160), Accession No. Hs 512676, Accession No. Hs 512693(FLJ20859), Accession No. Hs 512756(THAP7), Accession No. Hs 512815(AP3D1), Accession No. Hs 512857(CD151), Accession No. Hs 512867(163), Accession No. Hs 512908(ARPP-19), Accession No. Hs 513043(C15orf12), Accession No. Hs 513055(REC14), Accession No. Hs 513057(RANBP5), Accession No. Hs 513058(TMED3), Accession No. Hs 513071(MESDC1), Accession No. Hs 513083(RPL9), Accession No. Hs 513141(IDH2), Accession No. Hs 513145(NEUGRIN), Accession No. Hs 513153(FURIN), Accession No. Hs 513230(MRPL28). Accession No. Hs 513242(RHOT2), Accession No. Hs 513261(C16orf34), Accession No. Hs 513266(NDUFB10), Accession No. Hs 513470(NFATC21P), Accession No. Hs 513488(MVP), Accession No. Hs 513490(ALDOA), Accession No. Hs 513520(BCKDK), Accession No. Hs 513522(FUS), Accession No. Hs 513631(ARL2BP), Accession No. Hs 513856(DPH2L1), Accession No. Hs 513984(FLII), Accession No. Hs 514012(MAP2K3), Accession No. Hs 514036(SDP2), Accession No. Hs 514038(FLOT2), Accession No. Hs 514174(JUP), Accession No. Hs 514196(RPL27), Accession No. Hs 514211(MGC4251), Accession No. Hs 514216(CGI-69), Accession No. Hs 514220(GRN), Accession No. Hs 514297(PLJ13855), Accession No. Hs 514303(PHB), Accession No. Hs 514435(SP3B3), Accession No. Hs 514489(WBP2), Accession No. Hs 514535(LGAL3BP), Accession No. Hs 514581(ACTG1), Accession No. Hs 514590(HGS), Accession No. Hs 514819(AP2B1), Accession No. Hs 514870(ATP5F1), Accession No. Hs 514920(NDP52), Accession No. Hs 514934(CAPZA1), Accession No. Hs 515003(C9orf6), Accession No. Hs 515005(STK11), Accession No. Hs 515018(GNAI3), Accession No. Hs 515053(AES), Accession No. Hs 515070(EEF2), Accession No. Hs 515092(CLPP), Accession No. Hs 515155(MGC2803), Accession No. Hs 515162(CALR), Accession No. Hs 515164(GADD45GIP1), Accession No. Hs 515210(DNAJB1), Accession No. Hs 515255(LSM4), Accession No. Hs 515266(RENT1), Accession No. Hs 515271(SFRS14), Accession No. Hs 515329(RPL22), Accession No. Hs 515371(CAPNS1), Accession No. Hs 515406(AKT2), Accession No. Hs 515417(EGLN2), Accession No. Hs 515432(DEDD2), Accession No. Hs 515472(SNRPD2), Accession No. Hs 515475(SYMPK), Accession No. Hs 515487(CALM3), Accession No. Hs 515494(SLC1A5), Accession No. Hs 515500(SAE1), Accession No. Hs 515515(KDELR1), Accession No. Us 515517(RPL18), Accession No. Hs 515524(NUCB1), Accession No. Hs 515540(PTOV1), Accession No. Hs 515550(LOC284361), Accession No. Hs 515598(PRPF31), Accession No. Hs 515607(PPP1R12C), Accession No. Hs 515642(GPSN2), Accession No. Hs 515785(BLVRB), Accession No. Hs 551846(RUVBL2), Accession No. Hs 515848(HADHB), Accession No. Hs 515890(YPEL5), Accession No. Hs 516075(TIA1), Accession No. Hs 516077(FJ14668), Accession No. Hs 516087(TEX261), Accession No. Hs 516111(DCTN1), Accession No. Hs 516114(WBP1), Accession No. Hs 516157(MAT2A), Accession No. Hs 516450(FLJ20297), Accession No. Hs 516522(FLJ21919), Accession No. Hs 516539(HNRPA3), Accession No. Hs 516587(UBE2Q), Accession No. Hs 516633(NCKAP1), Accession No. Hs 516711(CHPF), Accession No. Hs 516790(ARHGEF2), Accession No. Hs 516807(STK25), Accession No. Hs 516826(TRIB3), Accession No. Hs 516855(CENPB), Accession No. Hs 517080(SLC35C2), Accession No. Hs 517106(CEBPB), Accession No. Hs 5171134(C20orf43), Accession No. Hs 517145(ENOI), Accession No. Hs 517168(TAGLN2), Accession No. Hs 517216(PEA15), Accession No. Hs 517232(PEX19), Accession No. Hs 517240(IFNGR2), Accession No. Hs 517262(SON), Accession No. Hs 517293(F11R), Accession No. Hs 517338(ATP6V1E1), Accession No. Hs 17342(DEDD), Accession No. Hs 517356(COL18A1), Accession No. Hs 517357(DGCR2), Accession No. Hs 517421(PCQAP), Accession No. Hs 517438(ASCC2), Accession No. Hs 517517(EP300), Accession No. Hs 517543(PES1), Accession No. Hs 517582(MCM5), Accession No. Hs 517622(UNC84B), Accession No. Hs 517641(L3MBTL2), Accession No. Hs 517666(DIA1), Accession No. Hs 517731(PP2447), Accession No. Hs 517768(DKPZP64B167), Accession No. Hs 517792(C3orf10), Accession No. Hs 517817(MGC3222), Accession No. Hs 517821, Accession No. Hs 517888(CRTAP), Accession No. Hs 517948(DHX30), Accession No. Hs 517949(MAP4), Accession No. Hs 517969(APEH), Accession No. Hs 517981(TUSC2), Accession No. Hs 518060(ARL6IP5), Accession No. Hs 518123(TFG) Accession No. Hs 518236(SEC61A1), Accession No. Hs 518244(RPN1), Accession No. Hs 518249(ZNP9), Accession No. Hs 518250(COPG) Accession No. Hs 518265(1141), Accession No. Hs 518326(SERP1), Accession No. Hs 518346(SSR3), Accession No. Hs 518374(QSCN6), Accession No. Hs 518424(NDUFB5), Accession No. Hs 518460(AP2M1), Accession No. Hs 518464(PSMD2), Accession No. Hs 518525(GLUL), Accession No. Hs 518551(RPL31), Accession No. Hs 518608(PP784), Accession No. Hs 518609(ARPC5), Accession No. Hs 518750(OCIAD1), Accession No. Hs 18805(HMGA1), Accession No. Hs 518827(CCNI), Accession No. Hs 519276(MAPKAPK2), Accession No. Hs 519304(PELO), Accession No. Hs 519346(ERBB2IP), Accession No. Hs 519347(SFRS12), Accession No. Hs 519520(RPS25), Accession No. Hs 519523(SERPINB6), Accession No. Hs 519557(TMEM14C), Accession No. Hs 519718(TTC1), Accession No. Hs 519756(STK10), Accession No. Hs 519818(MGAT1), Accession No. Hs 519909(MARCKS), Accession No. Hs 519930(C6orf62), Accession No. Hs 520026(VARS2), Accession No. Hs 520028(HSPA1A), Accession No. Hs 520037(NEU1), Accession No. Hs 520070(C6orf82), Accession No. Hs 520140(SRF), Accession No. Hs 520189(ELOVL5), Accession No. Hs 520205(EIF2AK1), Accession No. Hs 520210(KDELR2), Accession No. Hs 520287(C6orf111), Accession No. Hs 520313(CD164), Accession No. Hs 520383(STX7), Accession No. Hs 520421(PERP), Accession No. Hs 520459(GTF21), Accession No. Hs 520623(C7orf27), Accession No. Hs 520640(ACTB), Accession No. Hs 520740(SCRN1), Accession No. Hs 520794(YKT6), Accession No. Hs 520898(CTSB), Accession No. Hs 520943(WBSCR1), Accession No. Hs 520967(MDH2), Accession No. Hs 520973(HSPB1), Accession No. Hs 520974(YWHAG), Accession No. Hs 521064(ZNF655), Accession No. Hs 521151(FLJ22301), Accession No. Hs 521289(REPIN1), Accession No. Hs 521487(MGC8721), Accession No. Hs 521640(RAD23B), Accession No. Hs 521809(COBRA1), Accession No. Hs 521903(LY6E), Accession No. Hs 521924(SIAHBP1), Accession No. Hs 521969(NDUFB11), Accession No. Hs 521973(WDR13), Accession No. Hs 522074(DSIPI), Accession No. Hs 522110(CRBB3), Accession No. Hs 522114(CLTA), Accession No. Hs 522310(NANS), Accession No. Hs 522373(GSN), Accession No. Hs 522394(HSPA5), Accession No. Hs 522463(EEF1A1), Accession No. Hs 522507(FBXW5), Accession No. Hs 522584(TMSB4X), Accession No. Hs 522590(EIF1AX), Accession No. Hs 522632(TIMP1), Accession No. Hs 522665(MAGED2), Accession No. Hs 522675(F1J2525), Accession No. Hs 522752(PSMD10), Accession No. Hs 522817(BCAP31), Accession No. Hs 522819(IRAK1), Accession No. Hs 522823(EMD), Accession No. Hs 522932(NCOA4), Accession No. Hs 522995(EIF4BBP2, Accession No. Hs 523004(PSAP), Accession No. Hs 523012(DDIT4), Accession No. Hs 523054(SMP1), Accession No. Hs 523131 TRAPPC3), Accession No. Hs 523145(DDOST), Accession No. Hs 523215(NDUFB8), Accession No. Hs 523238(NOLC1), Accession No. Hs 523262(C1orf8), Accession No. Hs 523299(EIF3S10), Accession No. Hs 523302(PRDX3), Accession No. Hs 523560(HSPCA), Accession No. Hs 523680(SSRP1), Accession No. Hs 523789(TncRNA), Accession No. Hs 523829(POLD4), Accession No. Hs 523836(GSTP1), Accession No. Hs 523852(CCND1), Accession No. Hs 523875(INPPL1), Accession No. Hs 524009(AASDHPPT), Accession No. Hs 524081(DPAGT1), Accession No. Hs 524084(RNF26), Accession No. Hs 524161(RSU1), Accession No. Hs 524171(RAD52), Accession No. Hs 524183(PKBP4. Accession No. Hs 524195(ARHGAP21), Accession No. Hs 524214(MLF2), Accession No. Hs 524219(TPI1), Accession No. Hs 524271(PHC2), Accession No. Hs 524367(CBARA1), Accession No. Hs 524395(TUBA3), Accession No. Hs 524464(ATPSG2), Accession No. Hs 524502(RNF41), Accession No. Hs 524530(CTDSP2), Accession No. Hs 524590(RAB21), Accession No. Hs 524599(NAPIL1), Accession No. Hs 524690(PPIE), Accession No. Hs 524788(RAB35), Accession No. Hs 524809(RSN), Accession No. Hs 524899(SAP18), Accession No. Hs 524920(ZFP91), Accession No. Hs 524969(Ufm1), Accession No. Hs 525134(FU20277), Accession No. Hs 525163(ANKRD10), Accession No. Hs 525232(LRP10), Accession No. Hs 525238(C14orf119), Accession No. Hs 525330(ARF6), Accession No. Hs 525391(FLJ20580), Accession No. Hs 525527(RER1), Accession No. Hs 525626(PACS1L), Accession No. Hs 525899(C6orf49), Accession No. Hs 526464(PML), Accession No. Hs 526521(MDH1), Accession No. Hs 527105(HNRPDL), Accession No. Hs 527193(RPS23), Accession No. Hs 527348(AKAP9), Accession No. Hs 527412(ASAHI), Accession No. Hs 527861(06-9), Accession No. Hs 527862(PKD1), Accession No. Hs 527980(DUT), Accession No. Hs 528050(HARS), Accession No. Hs 528222(NDUFS4), Accession No. Hs 528300(PITRM1), Accession No. Hs 528305(DDX17), Accession No. Hs 528572(SCAM-1), Accession No. Hs 528668(RPL6), Accession No. Hs 528780(GSPT1), Accession No. Hs 528803(UQCRC2), Accession No. Hs 529059(EIF3S4), Accession No. Hs 529132(SEPW1), Accession No. Hs 529244(NCK2), Accession No. Hs 529280(ANAPC7), Accession No. Hs 529303(ARPC2), Accession No. Hs 529369(APAP), Accession No. Hs 529400(IFNAR1), Accession No. Hs 529420(UBE2G2), Accession No. Hs 529591(TLOC1), Accession No. Hs 529618(TFRC), Accession No. Hs 529631(RPL35A), Accession No. Hs 529782(VCP), Accession No. Hs 529798(BTP3), Accession No. Hs 529862(CSNK1A1), Accession No. Hs 529890(CANX), Accession No. Hs 529892(SQSTM1), Accession No. Hs 529957(SEC63), Accession No. Hs 530096(EIF3S2), Accession No. Hs 530118(LUC7L2), Accession No. Hs 530291(ANXA11), Accession No. Hs 530314(SSNA1), Accession No. Hs 530331(PDHA1), Accession No. Hs 530381(PIM3), Accession No. Hs 530412(PAI-RBP1), Accession No. Hs 530436(STXBP3), Accession No. Hs 530479(PMF1), Accession No. Hs 530687(RNH), Accession No. Hs 530734(MRPL16), Accession No. Hs 530753(FL20625), Accession No. Hs 530823(COPS7A), Accession No. Hs 530862(PRKAG1), Accession No. Hs 531081(LGALS3), Accession No. Hs 531089(PSMA3), Accession No. Hs 531176(SARS), Accession No. Hs 531330(CBWD1), Accession No. Hs 531614(BTBD14B), Accession No. Hs 531752(RANBP3), Accession No. Hs 531856(GAS5), Accession No. Hs 531876(DNCL2A), Accession No. Hs 531879(RAD1) Accession No. Hs 532359(RPL5), Accession No. Hs 532399(KIAA0663), Accession No. Hs 532755(GTL3), Accession No. Hs 532790(NMT1), Accession No. Hs 532793(KPNB1), Accession No. Hs 532803(HN1), Accession No. Hs 532826(MCL1), Accession No. Hs 532853(NDUFB7), Accession No. Hs 533030(HRIHFB2122), Accession No. Hs 533059(TUBB), Accession No. Hs 533122(SFRS10), Accession No. Hs 533136(LRPAP1), Accession No. Hs 533192(TOMM20), Accession No. Hs 533222(HSA9761), Accession No. Hs 533245(DDX46), Accession No. Hs 533282(NONO), Accession No. Hs 533306(PPP2R5D), Accession No. Hs 533317(VIM), Accession No. Hs 533437(TCEB1), Accession No. Hs 533440(WWP1), Accession No. Hs 533474(PPP1R8), Accession No. Hs 533479(LYPLA2), Accession No. Hs 533526(ATRX), Accession No. Hs 533624(H3F3A), Accession No. Hs 533712(RBM4), Accession No. Hs 533732(SRP14), Accession No. Hs 533771(STUB1), Accession No. Hs 533782(KRT8), Accession No. Hs 533977(TXNIP), Accession No. Hs 533985(BXOC7), Accession No. Hs 533986(ZNF258), Accession No. Hs 534125(HLA-C), Accession No. Hs 534168(NDUFA1), Accession No. Hs 534212(SEC22L1), Accession No. Hs 534255(B2M), Accession No. Hs 534307(CCND3), Accession No. Hs 534314(EIF5A), Accession No. Hs 534326(ITGB4BP), Accession No. Hs 534338(PPP4C), Accession No. Hs 534346(RPS7), Accession No. Hs 534350(SMARCB1), Accession No. Hs 534453(GRIM9), Accession No. Hs 534456(ANAPC11), Accession No. Hs 534457(C4orf166), Accession No. Hs 534473(TOMM22), Accession No. Hs 534483(MGC2941), Accession No. Hs 536275(PACS1), Accession No. Hs 541269(NDUFB9), Accession No. Hs 546248(CTSD), Accession No. Hs 546250(DNCI2), Accession No. Hs 546253(FDFT1), Accession No. Hs 546261(HNRPA1), Accession No. Hs 546269(RPL10A), Accession No. Hs 546271(PCBP2), Accession No. Hs 546286(RPS3), Accession No. Hs 546289(RPS12), Accession No. Hs 546290(RPS18), Accession No. Hs 546291(NET-5), Accession No. Hs 546339(SMAP), Accession No. Hs 546356(RPL13A), Accession No. Hs 546394(HSPC016), Accession No. Hs 547759(SSBP3), Accession No. Hs 549178(C9orf86), Accession No. Hs 552590(HTF9C), Accession No. Hs 553496(PGM3), Accession No. Hs 553512(C3F), Accession No. Hs 554767(NUP88), Accession No. Hs 554776(SREBF1), Accession No. Hs 554894(FLJ12953), Accession No. Hs 554896(MGC11257) Accession No. Hs 555194(FAM36A), Accession No. Hs 555866(C1QBP), Accession No. Hs 555873(HNRPAB), Accession No. Hs 555875(IDH3A), Accession No. Hs 555889(PSMC2), Accession No. Hs 555890(RBBP4), Accession No. Hs 555911(RBM8A), Accession No. Hs 555969(RIC8), Accession No. Hs 555971(PP1201), Accession No. Hs 555973(MRPS25), Accession No. Hs 555994(LONP), Accession No. Hs 556267(PBXL10), Accession No. Hs 556461(NDUFV2), Accession No. Hs 556795(PAICS), Accession No. Hs 557550(NPM1), Accession No. Hs 558296(ACP1), Accession No. Hs 558313(COX6A1), Accession No. Hs 558322(EEF1B2), Accession No. Hs 558325(EIF5), Accession No. Hs 558328(PFKBP5), Accession No. Hs 558330(FTL), Accession No. Hs 558338(HSPBE1), Accession No. Hs 558345(IK), Accession No. Hs 558354(LAMR1), Accession No. Hs 558360(NDUFB4), Accession No. Hs 558361(NME2), Accession No. Hs 558362(NUMA1), Accession No. Hs 558376(RAC1), Accession No. Hs 558381(RNU65), Accession No. Hs 558382(RPL15), Accession No. Hs 358383(RPL18A), Accession No. Hs 558384(RPL19), Accession No. Hs 558385(RPL23A), Accession No. Hs 558386(RPL34), Accession No. Hs 558388(RPS3A), Accession No. Hs 558389(RPS8), Accession No. Hs 558390(RPS24), Accession No. Hs 558391(RPS26), Accession No. Hs 558396(SCD), Accession No. Hs 558424(CSDA), Accession No. Hs 558426(EIF3S5), Accession No. Hs 558429(010), Accession No. Hs 558431(RPL14), Accession No. Hs 558442(PDCD6IP), Accession No. Hs 558448(TXNL2), Accession No. Hs 558453(ATPSL), Accession No. Hs 558454(NUDC), Accession No. Hs 558458(COPS8), Accession No. Hs 558473(C8orf10), Accession No. Hs 558499(8D6A), Accession No. Hs 558511(PSARL), Accession No. Hs 558521(C2orf33), Accession No. Hs 558591(ORMDL1), Accession No. Hs 558825(PDE4DIP), Accession No. Hs 558995, Accession No. Hs 567260(CD2BP2), Accession No. Hs 567263(C15orf43), Accession No. Hs 567267(ATP2C1) and Accession No. Hs 567279(HCNGP). According to the present invention, the detection reagent is a pair of primers and/or probes applicable to the amplification of the candidate reference gene.


Suitable for use in the composition of the present invention is a pair of a sense primer and an antisense primer, both ranging in length from 10 to 50 bp, corresponding to a sense or antisense sequence of the selected candidate reference gene, respectively. The sense primer is preferably 12˜30 bp, more preferably 15˜26 bp, and most preferably 17˜22 bp in length. This is also true of the antisense primer. However, as long as they are useful in the amplification of the gene, the primers used in the present invention can be any length. The primers may be designed using a well-known primer design program. Additionally, the primers me not limited as to their position on the gene, as long as they can be used in the amplification of the gene.


In contrast to previously reported traditional HKGs, in which genes encoding metabolism and ribosome proteins are contained in high proportions (Eisenberg E & Levanon E Y, Trends Genet 19:362-5, 2003; Hsiao L L et al., Physiol Genomics 7:97-104, 2001), genes encoding proteins involved in protein fate (23%, 308/1318) and cellular transport (21%, 273/1318) are found at a high proportion within the candidate ERGs when they are classified by FunCat (Functional Classification Catalogue Version 2.0. Ruepp A et al., Nucleic Acids Res 32:5539-45, 2004) (see FIG. 2). Further, analysis on the 2,087 genes shows a high frequency of CpG islands, which is in line with the results of previous reports (Larsen P et al., Genomics 13:1095-107, 1992; Ponger L et al., Genome Res 1:1854-60, 2001) (see TABLE 1).


Moreover, the genes can be detected using microarray. SAGE (Serial Analysis of Gene Expression) or qRT-PCR (quantitative real time PCR). Out of the genes, the most abundant transcript was found to come from EEF1A1 in EST and LongSAGE, from DGK1 in ShortSAGE, and from RPL10A in HG-U133 microarray (see Table 2).


In addition, the reference genes selected and identified according to the present invention are adopted as candidate reference genes which may be useful in the analysis of the genes of interest through the validation of expression stability.


In accordance with a further aspect thereof, the present invention provides a method for quantifying an expression level of a gene of interest, comprising:


1) performing real-time PCR to amplify the gene of interest with a pair of primers and/or probes and then performing real-time PCR to amplify the candidate endogenous reference gene with the composition; and


2) normalizing the expression level of the gene of interest relative to that of the candidate endogenous reference gene.


In accordance with still a further aspect thereof, the present invention provides a method for selecting guide genes, comprising measuring the selected candidate endogenous reference genes for coefficient of variation (CV) and ranking the endogenous reference genes in an ascending order of CV.


In an embodiment, the guide genes are expressed in most human body tissues. The guide genes can be used to normalize expression levels for relative quantification of gene expression between different samples. The higher the coefficient of variation (CV) is, the more greatly the gene expression varies from one tissue to another.


CVs of the candidate reference genes, selected using the selection method of the present invention, were calculated for each UniGene cluster in the datasets including EST, ShortSAGE. LongSAGE and microarray, and the genes were arranged in ascending order of CV. From the candidate ERG were selected the reference genes which were found to be stably expressed across a wide range of tissues. Out of the 400 genes (corresponding to about 20% of the candidate ERG) which were preferentially ranked in ascending order of CV from each dataset, 13 ERGs common to all four datasets were selected (see FIG. 1 and Table 3). The 13 reference genes are identified as Accession No. Hs 500775(ZNF207), Accession No. Hs 446427(OAZ1), Accession No. Hs 530118(LUC7L2), Accession No. Hs 208597(CTBP1), Accession No. Hs 440382(TRIM27), Accession No. Hs 444279(GPBP1), Accession No. Hs 250009(ARL8B), Accession No. Hs 9589(UBQLN1), Accession No. Hs 253726(PAPOLA), Accession No. Hs 146806(CUL1), Accession No. Hs 533222(DIMT1L), Accession No. Hs 494985(FBXW2) and Accession No. Hs 242458(SPG21).


In other words, the reference genes am genes that show lower expression variations than do the other genes among the 2,087 genes expressed in most tissues. The reference genes identified according to the present invention are expressed in a manner similar to that in which the majority of the intracellular transcripts are expressed at low abundance.


In an aspect of gene expression level and CV, the 13 reference genes identified according to the present invention were compared with 13 traditional reference genes (see Table 4). In all datasets, six of the 13 traditional reference genes showed relatively high mean expression levels, while the other traditional reference genes indicated expression levels similar to or lower than those of the reference genes of the present invention. In terms of both expression level and CV, the traditional reference genes are generally greater than the endogenous reference genes of the present invention (see FIGS. 6 and 7).


In order to validate the suitability of the 13 genes for reference genes, they were examined for gene copy number variation with reference to the Database of Genomic Variants(//projects.teag.ca/variation)(see Table 5). As a result, only OAZ1 and DIMT1L, among the 13 genes of the present invention, were found on chromosome regions known for gene copy variation, whereas many (ACTB, GAPDH, PGK1, B2M, TBP, TFRC, ALAS1) of the traditional reference genes were located in such chromosome regions.


Furthermore, the quantitative real-time RT-PCR (qRT-PCR) analysis (see Table 7) of ERG on human tissue samples and cancer cell lines (see Table 6) indicated that the 13 novel ERGs were expressed in all 48 samples, including frozen human tissues and cancer cell lines (see FIG. 8). The novel 13 ERGs ranged from 19 to 29 in Cp (Crossing Point, the cycle number at which fluorescence crosses the background signal upon qRT-PCR) (see FIG. 9). In addition, using geNorm v3.4 software (Vandesonpele et al., Genome Biol 3:RESEARCH0034, 2002) and NormFinder software (Andersen C L et al., Cancer Res 64:5245-50, 2004). ERGs were analyzed for expression stability according to the following Mathematical Formula 4 in consideration of the efficiency of the PCR performed above (see Table 8). All of the 13 novel ERGs according to the present invention were found to show higher expression stability than were the traditional ERGs as calculated by the geNorm and NormFinder programs (see Table 9). In Table 9, lower expression stability values (M by geNorm. S by NormFinder) mean more stable expression.





Relative Expression=(1+E)ΔCp  <Mathematical Formula 4>

    • ΔCp=Minimum Cp−Sample Cp;
    • Minimum Cp=lowest Cp value; and
    • E=PCR Efficiency


There was no significant correlation between the M values, which were calculated with geNorm (M) and CV in microarray and LongSAGE datasets, but significance was found in EST and ShortSAGE datasets. Likewise, as for the stability values(S), calculated with NormFinder, significant correlation was found in EST, ShortSAGE and LongSAGE, but not in microarray. Both the M and the S values showed highest agreement with CV in ShortSAGE (see Table 10).


These results indicate that the reference genes identified according to the present invention are more stably expressed than are the traditional reference genes.


In consideration of the fact that the majority of intracellular transcripts are expressed in low abundance (Warrington J A et al., Physiol Genomics 2(3):143-147, 2000), traditional reference genes, having high expression levels, may not be suitable for use in normalization. A reference gene with an expression level similar to that of a target gene is recommended, so that the measurement can be done on the same linear scale (Szabo A et al., Genome Biol 5(8):R59, 2004; RocheAppliedScience Technical Note No. LC 15/2005). Therefore, the endogenous reference genes identified according to the present invention are believed to be more suitable and widely used because they show relatively lower expression and lower variability than do the traditional reference genes (Czechowski T et al., Plant Physiol 139(1):5-17, 2005).


In accordance with still another aspect thereof, the present invention provides a composition for detecting at least one of the guide genes identified according to the present invention, comprising a detection reagent applicable to amplification of the guide gene.


In an embodiment of this aspect, the guide genes feature low expression levels, like most low-abundance intracellular transcripts. The guide gene useful in the present invention is one or more genes selected from a group consisting of Accession No. Hs 500775(ZNF207), Accession No. Hs 446427(OAZ1), Accession No. Hs 530118(LUC7L2), Accession No. Hs 208597(CTBP1), Accession No. Hs 440382(TRIM27), Accession No. Hs 444279(GPBP1), Accession No. Hs 250009(ARL8B), Accession No. Hs 9589(UBQLN1), Accession No. Hs 253726(PAPOLA), Accession No. Hs 146806(CUL1), Accession No. Hs 533222(DIMT1L), Accession No. Hs 494985(FBXW2) and Accession No. Hs 242458(SPG21). According to the present invention, the detection reagent is a pair of primers and/or probes applicable to the amplification of the guide gene.


Suitable for use in the composition of the present invention is a pair of a sense primer and an antisense primer, both ranging in length from 10 to 50 bp corresponding to sense or antisense sequence of the identified guide genes, respectively. The sense primer is preferably 12˜30 bp, more preferably 15˜26 bp, and most preferably 17˜22 bp in length. This is also true of the antisense primer. However, as long as they are useful in the amplification of the gene, any length of primers can be used in the present invention. The primers may be designed using a well-known primer design program. Additionally, the primers are not limited by the position on the gene as long as they can be used in the amplification of the gene.


In addition, the detection method is preferably conducted using microarray. SAGE (Serial Analysis of Gene Expression) or qRT-PCR (quantitative real time PCR).


In accordance with yet a further aspect thereof, the present invention provides a method for quantifying an expression level of a target gene, comprising:


1) synthesizing cDNA from RNA of a subject;


2) performing real-time PCR to amplify the target gene using a pair of primers and/or probes, with the cDNA serving as a template and then performing real-time PCR to amplify the candidate endogenous reference gene using the composition; and


2) normalizing the expression level of the target gene to that of the candidate endogenous reference gene.


In accordance with yet another aspect thereof, the present invention provides a method for identifying the amplification of a target gene in genomic DNA, comprising:


1) amplifying the target gene with a pair of primers or probes through real-time PCR, with a genomic DNA of a subject serving as a template and than performing real-time PCR to amplify the candidate endogenous reference gene with the composition; and


2) normalizing the expression level of the target gene to that of the candidate endogenous reference gene.


Mode for Invention

A better understanding of the present invention may be obtained though the following examples which are set forth to illustrate, but are not to be construed as the limit of the present invention.


Example 1: Gene Expression Dataset Construction

EST (expressed sequence tag) and SAGE (serial analysis of gene expression) human gene expression data were collected from the publicly available CGAP site (The Cancer Genome Project, http://cgap.nci.nih.gov/). Microarray gene expression data were obtained from the GeneExpress Oncology Datasuite™ of Gene Logic Inc., based on the Affymetrix Human Genome U133 array set.


Out of a total of 8.633 libraries in Hs_LibData.dat (31 Oct. 2005) file, 77 libraries meeting the requirements: 1) non-normalized and 2) >10,000 sequences, were included in the EST dataset constructed from the CGAP site. EST frequency in each library was obtained from Hs_ExprData.dat (31 Oct. 2005) file, 29 different tissues, including normal and tumor samples, and 26,117 UniGene clusters were included in these libraries.


SAGE short data for all 280 libraries (Hs_shout.frequencies.gz, 5 Dec. 2006), representing 38,290 UniGene clusters, and SAGE long data (Hs_long.frequencies.gz 5 Dec. 2006) for 46 libraries, representing 21.868 UniGene clusters, were used in creating the dataset for SAGE short (ShortSAGE) and long (LongSAGE), respectively. Also, SAGE tags were mapped to UniGene clusters using the files Hs_short.best.gene.nz (5 Dec. 2006) and Hs_long.best_gene.gz (5 Dec. 2006). ShortSAGE and LongSAGE contained information on SAGE expression in 28 and 9 different tissues, including normal and tumor samples, respectively.


Affymetrix GeneChips gene expression data from 567 different samples representing 13 different tissues including the brain, the breast, the colon, the esophagus, the kidney, the liver, the lung, the lymph node, the ovary, the pancreas, the prostate, the rectum and the stomach were also analyzed (Table 11). Affymetrix (CA) HG-U133 and 44,760 different probe sets (total 44.928 probe sets) were included in the microarray dataset.


Example 2: Selected of Candidate ERG

Using the datasets constructed in Example 1, expression level was calculated for UniGene clusters so as to search for housekeeping genes which are constitutively expressed in most human tissues.


Gene expression levels of EST dataset for each gene were calculated as the number of ESTs of a gene in a given library, divided by the total number of ESTs in all genes in a given library and then multiplied by 1,000,000, as expressed by Mathematical Formula 1.


Likewise. Gene expression levels of SAGE dataset for each gene were calculated as the number of tags (sum of tag frequency) of a gene in a given library, divided by the total number of tags and then multiplied by 1,000,000, as expressed by Mathematical Formula 2.













Mathematical





Formula





1










ETS





gene





expression

=



No





of





EST





of





a





Given





Gene





in





Library


Total






No
.




of






ESTs





in





Libaray


×
1
,
000
,
000














Mathematical





Formula





2










SAGE





gene





expression

=



No





of





Tags





of





a





Given





Gene





in





Library


Total






No
.




of






Tags





in





Libaray


×
1
,
000
,
000





Expression levels in Microarray dataset were represented by the signal intensity calculated for each transcript by the analysis algorithm of Affymetrix Microarray Suite 5.0. Mean gene expression was defined as the average of gene expression level of a given gene in all libraries.


HKGs for use in identifying endogenous reference genes, which are expressed in most human tissues, were investigated using EST and SAGE datasets. In order to examine whether a given gene might be an HKG which is constitutively expressed across a wide range of tissues, the proportion of the tissues not expressing the given gene to the total tissues of the EST and SAGE datasets was calculated. If gene expression frequency is found in any one library of multiple libraries corresponding to one tissue, that gene was considered to be expressed in that tissue. For this, the 0's proportion, which is defined as the ratio of the number of the tissues in which a given gene was not expressed to the total number of tissues, was introduced. In the 0's proportion, “0” indicates that the gene is expressed in all tissues, and conversely, “1” means that the gene is not expressed in any tissue.
















Mathematical





Formula





3








0




s





Proportion

=



No
.




of






Tissues





with





No





Expression





of





a





Given





Gene


Total






No
.




of






Tissues






In a study of 101 samples obtained from 47 different human tissues and cell lines, cutoff values for the 0's proportion were determined in each of EST and SAGE datasets so as to include most of the 575 housekeeping genes identified from previous microarray data using the Affymetrix U95A chip (CA), containing 2,600 probes (Eisenberg E and Levanon E Y. Trends Genet, 19(7), 362-365, 2003). Genes with 0's proportion <0.4 for EST (EST, 4,027 UniGene clusters), 0.1 for ShortSAGE (4,758 UniGene clusters) and 0.3 for LongSAGE (4.569 UniGene clusters) were sorted, 2,087 genes common to the three datasets were selected


Out of the 575 genes obtained by U95A, 451(78.43%) in EST, 432(75.13%) in ShortSAGE, and 446(77.57%) in LongSAGE were included in the selected housekeeping genes, respectively. A majority of the 575 HKGs was found to have low 0's proportion in the constructed datasets, EST. ShortSAGE and LongSAGE even though some genes showed the 0's proportion greater than 0.5 unexpectedly. Traditional reference genes like RPLP0, ACTB, PPIA. GAPDH, PGK1. B2M and were TFRC also found in the 2,087 genes.


The mean gene expression value and CV (%) of the housekeeping genes selected from the EST and SAGE datasets were calculated in the microarray dataset (Affymetrix HG-U133, CA). The microarray expression data of 5,238 different probe sets (gene expression data for 5317 fragments, 1,990 UniGene clusters) corresponding to the selected HKGs were obtained.


UniGene clusters were used to allow respective gene probes to correspond thereto in the datasets. On the chip set HG-U133 were found cases where multiple probe sets, which show various expression intensities, correspond to one gene or UniGene cluster. In such cases, one probe set for one UniGene cluster, showing the lowest CV among several probe sets, was selected.


The 2.087 HKGs obtained above were categorized as “candidate ERGs” or “candidate reference genes” in accordance with the present invention.


Experimental Example 1: Analysis of Candidate ERG

<1-1> Functional Classification of Candidate ERG


Using FunCat (Functional Classification Catalogue, Version 2.0. Ruepp, A., t al. Nucleic Acids Res. 32, 5539-45, 2004), the 2.087 genes obtained above were classified.


Out of the 2,087 candidate ERGs, 1,689 UniGene clusters were associated with GO terms allocated to MIPS (Munich information Center for Protein Sequences) FunCat (Functional Catalogue). Among the 1,689 UniGene clusters, 1,318 UniGene clusters were functionally classified to be associated with GO terms corresponding to biological processes. These 1,318 genes were identified to be involved in various basic cellular functions. While a high proportion of the previously reported traditional HKGs encode metabolism and ribosome proteins (Eisenberg E & Levanon E Y, Trends Genet 19:362-5, 2003; Hsia L L et al., Physiol Genomics 7:97-104, 2001), genes encoding proteins involved in protein fate (23%, 308/1318) and cellular transport (21%, 273/1318) are found in large amounts in the candidate ERGs (FIG. 2).


<1-2> Analysis of Candidate ERGs for CpG Island


Sequences upstream of the annotated transcription start site of the ERGs according to the present invention were obtained from the UCSC site (//hgdownload.cse.ucsc.edu/goldenPath/hg18/bigZips/). CpG islands located 1,000, 2.000 and 5.000 bp upstream of the transcription start points on the basis of a DNA sequence longer than 500 bp, and having a O+C content of 55% and a CpG observed/expected ratio of 0.65 (Takai D & Jones P A Proc Nad Acad Sci USA, 99, 3740-5, 2002), were searched for using CpGIE software (Wang. Y & Leung, FC Bioinformatics, 20, 1170-7, 2004).


The Z-test (R program, //www.R-project.org) was applied to assess whether there was a statistical significance of differences in the frequency of genes with CpG island between the candidate ERGs and non-candidate ERGs. P<0.05 was considered to be significant.


In line with the previous repots (Larsen, P., et al., Genomics, 13, 1095-107, 1992; Ponger. L, et al., Genome Res, 11, 1854-60, 42, 2001), moat candidate ERGs were found to show high frequencies of CpG islands in upstream sequences (1000 bp; 70%, 2000 bp; 73%, 5000 bp; 76%). In contrast. CpG islands were found at low frequencies in the upstream sequences of non-candidate ERGO (p<0.001. Table 1).









TABLE 1







Comparison of the Proportion of Genes with CpG Islands


in Upstream Sequences of the transcription start site in


Candidate ERG and Non-Candidate ERG











Candidate ERG
Non-Candidate ERG




(No. = 2002)
(No. = 14848)















Ratios of

Ratios of



Upstream
No. of
Genes with
No. of
Genes with



Bp
Genes
CpG Islands
Genes
CpG Islands
p-values





5000
1516
76%
8036
54%
<0.001


2000
1456
73%
7410
50%
<0.001


1000
1410
70%
7048
47%
<0.001









Experimental Example 2: Correlation Analysis

Correlation analysis was performed using a correlation coefficient, which indicates linear association between two groups, with a significance level of p<0.05. All calculations and scatter plots were produced with the statistical analysis program R-Package (//www.r-project.org).


First, Pearson and Spearman's rank correlation analysis were performed to compare the candidate ERGs selected from the four datasets in terms of gene expression and CV. FIG. 3 is a scatter plot of gene expression for the four datasets of the candidate ERGs. It was observed that there was a significant correlation of expression values between all four datasets. ShortSAGE versus LongSAGE showed the highest Spearman correlation coefficient of 0.853 (p<0.0001) and the lowest Spearman correlation of 0.339 between EST and Microarray (p<0.0001).


Next, the coefficient of variation (CV, %) was computed to investigate the consistency of the expression level of the candidate ERGs across various libraries in each dataset. Pearson and Spearman's rank correlation analyses were performed on the CV thus obtained, indicating that the CV was less similar between datasets (Spearman correlation coefficient<0.5) than was the gene expression level although a significant correlation was still found (p≤0.001) (FIG. 4).


These results may be attributed to the difference in the kind and number of samples between datasets because expression levels may vary depending on the kind and number of the samples.


Experimental Example 3: Comparison Between Candidate ERG and Non-Candidate ERG

A t-test was conducted to examine whether there was a significant difference in mean gene expression between candidate ERG and non-candidate ERG. FIG. 5 shows the distribution of the gene expressions of candidate ERG and non-candidate ERG for each dataset. As was expected, the mean gene expression level of the candidate ERGs was significantly higher than that of non-candidate ERGs in all four datasets (p<0.0001). These results are in line with previous reports (Eisenberg E and Levanon E Y. Trends Genet. 19(7), 362-365, 2003).


Gene expression levels were found to range from 73.83 to 9324.87 in EST, from 28.58 to 4086.25 in ShortSAGE, from 17.47 to 4621.60 in LongSAGE, and from 1.47 to 18598.26 in HG-U133 microarray. A significant number of genes encoding ribosomal proteins showed the highest expression levels in all four datasets. The most abundant transcript was found to come from EEF1A1 in EST and LongSAGE, from DGK1 in ShortSAGE, and from RPL10A in HG-U133 microarray (Table 2)









TABLE 2





A list of 2087 candidate endogenous reference genes























SHORT


UniGene


EST
SAGE













cluster
Symbol
Gene Names
Mean
CV
0's P
Mean





120
PRDX6
Peroxiredoxin 6
458.61
113.71
0.034
222.30


142
SULT1A1
Sulfotransferase family, cytosolic. 1A, phenol-preferring, member 1
248.16
105.30
0.241
177.46


202
TSPO
translocator protein
198.55
80.83
0.207
233.57


429
ATP5G3
ATP synthase. H+ transporting, mitochondrial F0 complex, subuni
211.73
76.87
0.103
522.98




c (subunit 9) isoform 3


695
CSTB
Cystatin B (stefin B)
138.20
109.45
0.345
151.39


808
HNRPF
Heterogeneous nuclear ribonucleoprotein F
340.14
74.87
0.034
137.03


861
MAPK3
Mitogen-activated protein kinase 3
145.68
106.68
0.241
68.60


1063
SNRPC
Small nuclear ribonucleoprotein polypeptide C
171.26
77.26
0.276
96.52


1103
TGFB1
Transforming growth factor, beta 1 (Camurati-Engelmann disease)
197.32
110.45
0.345
106.49


2430
VPS72
Vacuolar protein sorting 72 homolog (S. cerevisiae)
117.28
76.90
0.241
41.98


2533
ALDH9A1
Aldehyde dehydrogenase 9 family. member A1
119.81
68.68
0.207
60.36


2795
LDHA
Lactate dehydrogenase A
723.58
109.92
0.034
334.22


2853
PCBP1
Poly(rC) binding protein 1
203.55
81.02
0.103
154.67


3100
KARS
Lysyl-tRNA synthetase
242.90
76.66
0.138
67.12


3254
MRPL23
Mitochondrial ribosomal protein L23
105.59
58.85
0.379
97.41


3353
G3BP1
GTPase activating protein (SH3 domain) binding protein 1
221.63
105.29
0.138
78.09


3416
ADFP
Adipose differentiation-related protein
250.88
167.90
0.241
109.67


3439
STOML2
Stomatin (EPB72)-like 2
303.44
78.37
0.069
70.64


3530
FUSIP1
FUS interacting protein (serine/arginine-rich) 1
188.96
77.05
0.138
79.35


3989
PLXNB2
Plexin B2
365.44
108.04
0.138
98.71


4055
KLF6
Kruppel-like factor 6
258.77
121.39
0.276
257.29


4742
GPAA1
GPAA1P anchor attachment protein 1 homolog (yeast)
334.17
107.33
0.207
107.98


4747
DKC1
Dyskeratosis congenita 1, dyskerin
232.08
109.39
0.138
62.19


4766
FAM32A
Family with sequence similarity 32, member A
182.68
72.56
0.138
55.17


4859
CCNL1
Cyclin L1
117.20
67.94
0.379
101.90


4997
RBM23
RNA binding motif protein 23
151.36
66.00
0.345
65.10


4998
TMOD3
Tropomodulin 3 (ubiquitous)
117.77
105.21
0.345
60.81


5062
TSPAN3
Tetraspanin 3
230.30
90.95
0.069
333.07


5086
RBM42
RNA binding motif protein 42
232.32
80.47
0.172
62.72


5120
DYNLL1
Dynein, light chain, LC8-type 1
202.21
103.08
0.103
212.71


5158
ILK
Integrin-linked kinase-2
154.41
64.84
0.138
163.14


5245
PIH1D1
PIH1 domain containing 1
300.56
124.75
0.207
64.41


5258
MAGED1
Melanoma antigen family D. 1
605.46
103.33
0.138
122.13


5268
ZDHHC4
Zinc finger. DHHC-type containing 4
105.02
62.27
0.345
71.67


5298
ADIPOR1
Adiponectin receptor 1
175.47
95.76
0.138
78.91


5308
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1
482.46
229.44
0.103
354.49


5324
C2orf25
Chromosome 2 open reading frame 25
665.12
222.84
0.138
73.70


5345
RNPEPL1
Arginyl aminopeptidase (aminopeptidase B)-like 1
174.04
85.31
0.310
69.83


5662
GNB2L1
Guanine nucleotide binding protein (G protein), beta polypeptide 2
2888.02
78.73
0.000
632.04




like 1


5710
CREG1
Cellular repressor of E1A-stimulated genes 1
186.09
125.07
0.241
58.67


5719
NCAPD2
Non-SMC condensin I complex. subunit D2
285.44
132.20
0.241
289.65


5912
FBXO7
F-box protein 7
203.36
91.84
0.207
53.23


5947
RAB8A
RAB8A, member RAS oncogene family
195.76
70.42
0.138
44.57


6396
JTB
Jumping translocation breakpoint
264.77
96.40
0.172
138.04


6454
GIPC1
GIPC PDZ domain containing family. member 1
283.16
100.25
0.069
233.69


6459
GPR172A
G protein-coupled receptor 172A
180.95
83.98
0.276
117.70


6551
ATP6AP1
ATPase. H+ transporting, lysosomal accessory protein 1
238.13
103.93
0.207
113.84


6891
SFRS6
Splicing factor, arginine/serine-rich 6
131.50
89.49
0.241
113.93


7101
ANAPC5
Anaphase promoting complex subunit 5
248.20
68.36
0.103
57.03


7236
NOSIP
Nitric oxide synthase interacting protein
160.80
86.71
0.310
73.56


7476
ATP6V0B
ATPase, H+ transporting. lysosomal 21 kDa, V0 subunit c″
179.43
84.77
0.241
134.42


7527
REXO2
REX2, RNA exonuclease 2 homolog (S. cerevisiae)
137.24
85.72
0.379
91.89


7744
NDUFV1
NADH dehydrogenase (ubiquinone) flavoprotein 1, 51 kDa
373.45
70.69
0.069
253.95


7753
CALU
Calumenin
251.14
83.95
0.069
200.10


7768
FIBP
Fibroblast growth factor (acidic) intracellular binding protein
149.44
71.07
0.138
81.86


7862
PNRC2
Proline-rich nuclear receptor coactivator 2
165.82
66.37
0.241
93.55


7910
RYBP
RING1 and YY1 binding protein
148.78
147.82
0.310
165.96


7917
HIGD1A
HIG1 domain family, member 1A
1039.59
201.55
0.103
249.49


8102
RPS20
Ribosomal protein S20
808.74
200.51
0.000
918.89


8372
UQCR
Ubiquinol-cytochrome c reductase, 6.4 kDa subunit
171.69
131.04
0.172
357.79


8737
WDR6
WD repeat domain 6
214.98
113.65
0.172
102.30


8752
TMEM4
Transmembrane protein 4
133.39
83.23
0.345
56.83


8765
DDX42
DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
139.51
72.23
0.310
48.25


8859
CANT1
Calcium activated nucleotidase 1
195.72
80.27
0.310
74.83


8867
CYR61
Cysteine-rich, angiogenic inducer. 61
267.57
79.91
0.379
187.29


9003
C16orf58
Chromosome 16 open reading frame 58
148.64
68.89
0.207
73.69


9015
LOC57255
Hypothetical locus LOC572558
130.09
98.43
0.276
184.94


9043
NGDN
Neuroguidin, EIF4E binding protein
117.81
54.04
0.379
56.29


9234
TMEM147
Transmembrane protein 147
129.58
83.82
0.207
68.85


9235
NME4
Protein expressed in non-metastatic cells 4
148.59
103.05
0.379
93.18


9527
C2orf28
Chromosome 2 open reading frame 28
184.04
88.83
0.207
81.51


9534
SEC11A
SEC11 homolog A (S. cerevisiae)
146.99
82.65
0.069
98.58


9573
ABCF1
ATP-binding cassette. sub-family F (GCN20). member 1
173.73
124.13
0.276
46.97


9589
UBQLN1
Ubiquilin 1
111.34
60.19
0.310
75.93


9788
NDFIP1
Nedd4 family interacting protein 1
167.04
73.62
0.172
82.06


9825
FAM96B
Family with sequence similarity 96. member B
139.95
94.16
0.345
76.79


9857
DCXR
Dicarbonyl/L-xylulose reductase
170.77
74.16
0.379
194.06


10326
COPE
Coatomer protein complex, subunit epsilon
383.31
95.38
0.103
164.06


10842
RAN
RAN. member RAS oncogene family
825.56
82.38
0.000
182.70


10848
BMS1
BMS1 homolog, ribosome assembly protein (yeast)
121.69
60.27
0.345
38.94


11125
SPCS1
Signal peptidase complex subunit 1 homolog (S. cerevisiae)
151.97
92.91
0.276
94.29


11184
UBE2R2
Ubiquitin-conjugating enzyme E2R 2
379.09
474.01
0.172
129.52


11223
IDH1
Isocitrate dehydrogenase 1 (NADP+), soluble
199.04
77.27
0.103
52.37


11355
TMPO
Thymopoietin
213.98
130.12
0.172
63.16


11463
CMPK
Cytidylate kinase
180.54
86.53
0.172
123.53


12013
ABCE1
ATP-binding cassette, sub-family E (OABP), member 1
179.59
72.05
0.241
47.30


12084
TUFM
Tu translation elongation factor, mitochondrial
518.02
95.08
0.207
235.78


12102
SNX3
Sorting nexin 3
280.04
91.18
0.207
131.08


12107
CHMP2A
Chromatin modifying protein 2A
108.77
44.44
0.207
76.75


12109
CIAO1
Cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)
127.53
69.27
0.207
66.06


12144
KIAA1033
KIAA1033
109.38
59.10
0.345
39.29


12152
SRPRB
Signal recognition particle receptor, B subunit
197.29
199.04
0.310
64.91


12272
BECN1
Beclin 1 (coiled-coil, myosin-like BCL2 interacting protein)
135.99
56.22
0.310
50.41


12341
ADAR
Adenosine deaminase. RNA-specific
272.66
83.29
0.103
99.54


12457
NUP133
Nucleoporin 133 kDa
134.39
100.25
0.310
69.13


12865
NSFL1C
NSFL1 (p97) cofactor (p47)
137.86
79.36
0.276
48.09


13662
TMEM109
Transmembrane protein 109
180.15
110.32
0.276
52.31


14317
NOLA3
Nucleolar protein family A, member 3 (H/ACA small nucleolar
205.32
119.91
0.310
169.22




RNPs)


14333
ATPBD1B
ATP binding domain 1 family, member B
159.24
82.57
0.379
150.04


14745
CCNY
Cyclin Y
133.37
75.66
0.276
86.24


14839
POLR2G
Polymerase (RNA) II (DNA directed) polypeptide G
141.30
66.30
0.207
89.01


14846
SLC7A1
Solute carrier family 7 (cationic amino acid transporter, y+ system
139.07
71.59
0.310
60.63




member 1


14894
TGOLN2
Trans-golgi network protein 2
157.54
69.37
0.241
121.24


15277
C16orf33
Chromosome 16 open reading frame 33
120.09
75.30
0.310
84.56


15591
COPS6
COP9 constitutive photomorphogenic homolog subunit 6
217.83
90.78
0.172
83.92




(Arabidopsis)


15738
RAB7A
RAB7A, member RAS oncogene family
400.18
95.67
0.069
120.91


16059
CCDC56
Coiled-coil domain containing 56
143.39
86.29
0.345
96.29


16130
UBE2O
Ubiquitin-conjugating enzyme E2O
157.52
114.59
0.241
63.36


16349
ASCIZ
ATM/ATR-Substrate Chk2-Interacting Zn2+-finger protein
122.72
69.67
0.310
39.01


17118
C1orf149
Chromosome 1 open reading frame 149
139.92
85.35
0.310
67.64


17250
COQ5
Coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
91.88
50.52
0.345
105.68


17680
FUCA2
Fucosidase, alpha-L-2. plasma
157.91
93.28
0.276
55.65


17731
CCDC14
Coiled-coil domain containing 14
84.79
48.78
0.379
64.78


17883
PPM1G
Protein phosphatase 1G (formerly 2C). magnesium-dependent.
381.13
94.17
0.103
159.30




gamma isoform


18069
LGMN
Legumain
189.38
150.90
0.310
74.08


18128
C20orf44
Chromosome 20 open reading frame 44
120.34
63.49
0.276
50.49


18349
MRPL15
Mitochondrial ribosomal protein L15
126.02
62.29
0.310
42.98


19673
MAF1
MAF1 homolog (S. cerevisiae)
208.66
72.97
0.069
71.97


20013
SYF2
SYF2 homolog. RNA splicing factor (S. cerevisiae)
109.39
47.58
0.310
80.86


20107
KLC1
Kinesin light chain 1
158.65
81.31
0.241
78.88


20157
CDK5RAP3
CDK5 regulatory subunit associated protein 3
186.17
71.88
0.276
79.43


20521
PRMT1
Protein arginine methyltransferase 1
270.96
72.70
0.103
131.53


20529
FAM79A
Family with sequence similarity 79, member A
101.33
68.50
0.379
50.65


20573
IGF1R
Insulin-like growth factor 1 receptor
133.12
72.84
0.379
106.46


20716
TIMM17A
Translocase of inner mitochondrial membrane 17 homolog A
378.20
138.09
0.241
84.45




(yeast)


22393
DENR
Density-regulated protein
147.59
60.97
0.138
66.26


22543
UBE3A
Ubiquitin protein ligase E3A (human papilloma virus E6-associatetext missing or illegible when filed
180.41
98.42
0.276
92.47




protein, Angelman syndrome)


22546
CYBASC3
Cytochrome b, ascorbate dependent 3
271.22
114.11
0.276
52.24


22616
KIAA0664
KIAA0664 protein
126.85
69.83
0.276
39.21


23033
UBE2Q2
Ubiquitin-conjugating enzyme E2Q (putative) 2
127.34
80.73
0.379
38.96


23111
FARSA
Phenylalanyl-tRNA synthetase, alpha subunit
239.95
79.63
0.241
48.89


23978
SAFB
Scaffold attachment factor B
195.91
87.35
0.207
63.83


24301
POLR2E
Polymerase (RNA) II (DNA directed) polypeptide E, 25 kDa
345.43
77.04
0.207
85.97


24379
TRAPPC1
Trafficking protein particle complex 1
155.30
123.38
0.172
110.66


24601
FBLN1
Fibulin 1
492.05
242.68
0.345
156.54


24950
RGS5
Regulator of G-protein signalling 5
561.58
225.25
0.345
142.46


25155
NET1
Neuroepithelial cell transforming gene 1
114.28
95.82
0.207
72.57


25450
SLC29A1
Solute carrier family 29 (nucleoside transporters). member 1
201.64
68.32
0.379
64.55


25723
FAM89B
Family with sequence similarity 89, member B
140.19
148.04
0.345
67.63


26010
PFKP
Phosphofructokinase. platelet
268.83
113.15
0.103
141.32


26023
FOXJ3
Forkhead box J3
73.83
44.60
0.379
59.94


26136
PIGY
Phosphatidylinositol glycan anchor biosynthesis. class Y
150.82
96.10
0.345
217.48


26232
MAN2C1
Mannosidase. alpha, class 2C. member 1
117.43
87.14
0.379
35.17


26403
GSTZ1
Glutathione transferase zeta 1 (maleylacetoacetate isomerase)
139.46
92.67
0.345
50.70


26518
TSPAN4
Tetraspanin 4
164.19
75.89
0.310
86.39


27222
NOLA2
Nucleolar protein family A. member 2 (H/ACA small nucleolar
172.83
107.54
0.276
108.00




RNPs)


28491
SAT1
Spermidine/spermine N1-acetyltransferase 1
578.08
192.92
0.276
378.42


28914
APRT
Adenine phosphoribosyltransferase
160.48
119.31
0.345
95.10


29203
GBL
G protein beta subunit-like
172.86
96.17
0.310
80.31


29665
CLSTN1
Calsyntenin 1
223.34
109.23
0.103
167.80


30011
TMEM93
Transmembrane protein 93
122.56
80.02
0.379
65.81


30026
SSU72
SSU72 RNA polymerase II CTD phosphatase homolog (S.
122.96
77.31
0.138
99.27





cerevisiae)



30345
TRAP1
TNF receptor-associated protein 1
433.73
106.66
0.103
96.17


30954
PMVK
Phosphomevalonate kinase
168.78
141.42
0.379
53.56


31053
TBCB
Tubulin folding cofactor B
267.45
128.93
0.276
115.61


31334
PRPF6
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
278.00
95.93
0.103
96.19


31387
C3orf60
Chromosome 3 open reading frame 60
194.85
96.83
0.276
72.05


34045
CDCA4
Cell division cycle associated 4
142.01
95.48
0.379
33.71


34576
TAX1BP1
Tax1 (human T-cell leukemia virus type I) binding protein 1
166.29
86.39
0.138
127.07


34906
BLOC1S2
Biogenesis of lysosome-related organelles complex-1, subunit 2
110.24
106.36
0.345
62.63


35052
TEGT
Testis enhanced gene transcript (BAX inhibitor 1)
601.46
76.56
0.000
357.59


35828
MARK3
MAP/microtubule affinity-regulating kinase 3
181.74
68.97
0.207
74.00


36587
PPP1R7
Protein phosphatase 1. regulatory subunit 7
147.34
89.65
0.207
55.81


36927
HSPH1
Heat shock 105 kDa/110 kDa protein 1
142.61
62.36
0.241
178.86


37616
STRA13
Stimulated by retinoic acid 13 homolog (mouse)
132.28
87.28
0.310
103.87


37916
DPP7
Dipeptidylpeptidase 7
189.05
126.98
0.207
134.29


42806
SDF4
Stromal cell derived factor 4
395.61
110.02
0.138
55.59


43297
MTPN
Myotrophin
224.31
82.09
0.172
192.32


47062
POLR2I
Polymerase (RNA) II (DNA directed) polypeptide I, 14.5 kDa
136.77
76.60
0.310
77.76


50098
NDUFA4
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9 kDa
444.09
142.87
0.310
773.46


50308
HIP2
Huntingtin interacting protein 2
145.77
68.04
0.207
85.98


50425
PTGES3
Prostaglandin E synthase 3 (cytosolic)
411.83
77.96
0.103
332.11


53066
HSPBP1
Hsp70-interacting protein
202.07
92.49
0.138
68.61


54277
FAM50A
Family with sequence similarity 50, member A
145.83
129.34
0.345
100.96


54457
CD81
CD81 antigen (target of antiproliferative antibody 1)
303.19
99.16
0.069
141.89


54642
MAT2B
Methionine adenosyltransferase II, beta
133.55
71.29
0.207
61.78


54649
RY1
Putative nucleic acid binding protein RY-1
203.85
97.67
0.241
75.69


55682
EIF3S7
Eukaryotic translation initiation factor 3. subunit 7 zeta. 66/67 kDa
455.77
153.84
0.034
89.94


55847
MRPL51
Mitochondrial ribosomal protein L51
122.64
99.22
0.241
154.55


58488
CTNNAL1
Catenin (cadherin-associated protein), alpha-like 1
126.66
70.42
0.379
68.29


58992
SMC4
Structural maintenance of chromosomes 4
228.66
99.66
0.207
72.95


59486
HSDL2
Hydroxysteroid dehydrogenase like 2
129.48
73.68
0.345
63.64


61812
PTPN12
Protein tyrosine phosphatase. non-receptor type 12
108.62
74.97
0.345
108.97


65234
DDX27
DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
199.19
91.01
0.241
62.30


65238
RNF40
Ring finger protein 40
193.26
81.38
0.172
54.91


66048
MAP1S
Microtubule-associated protein 1S
131.74
79.04
0.276
47.23


66915
C22orf16
Chromosome 22 open reading frame 16
135.11
102.77
0.379
60.49


68714
SFRS1
Splicing factor, arginine/serine-rich 1 (splicing factor 2. alternate
249.07
79.18
0.103
98.30




splicing factor)


69293
HEXB
Hexosaminidase B (beta polypeptide)
198.57
153.59
0.276
71.52


69554
RNF126
Ring finger protein 126
161.03
83.35
0.241
55.88


69855
UNR
Cold shock domain containing E1, RNA-binding
657.29
110.51
0.103
304.45


71465
SQLE
Squalene epoxidase
105.27
62.62
0.276
77.51


71787
MRPS7
Mitochondrial ribosomal protein S7
159.90
59.92
0.310
86.87


73527
CSNK2B
Casein kinase 2. beta polypeptide
202.65
73.01
0.207
101.19


73722
APEX1
APEX nuclease (multifunctional DNA repair enzyme) 1
339.50
85.30
0.103
230.38


73799
GNAI3
Guanine nucleotide binding protein (G protein). alpha inhibiting
150.46
62.95
0.207
56.56




activity polypeptide 3


73965
SFRS2
Hypothetical protein ET
280.26
73.78
0.000
222.54


74047
ETFB
Electron-transfer-flavoprotein, beta polypeptide
168.06
80.53
0.138
68.32


74050
FVT1
Follicular lymphoma variant translocation 1
98.29
70.32
0.379
59.60


74137
TMED10
Transmembrane emp24-like trafficking protein 10 (yeast)
237.09
91.81
0.138
150.00


74375
DVL1
Dishevelled, dsh homolog 1 (Drosophila)
133.54
77.04
0.276
79.92


74405
YWHAQ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
413.13
88.00
0.034
420.70




activation protein. theta polypeptide


74471
GJA1
Gap junction protein, alpha 1. 43 kDa (connexin 43)
183.35
62.77
0.379
500.49


74563
OAZ2
Ornithine decarboxylase antizyme 2
193.33
73.23
0.103
86.41


74564
SSR2
Signal sequence receptor. beta (translocon-associated protein
312.91
86.38
0.034
107.44




beta)


74576
GDI1
GDP dissociation inhibitor 1
230.50
117.59
0.138
161.01


75056
TIMM13
Translocase of inner mitochondrial membrane 13 homolog (yeast)
225.25
76.11
0.345
109.02


75061
MARCKSL
MARCKS-like 1
449.23
89.23
0.103
136.56


75066
TSN
Translin
128.46
75.98
0.345
72.68


75087
FASTK
Fas-activated serine/threonine kinase
179.08
68.42
0.345
123.07


75117
ILF2
Interleukin enhancer binding factor 2. 45 kDa
349.26
76.78
0.034
86.61


75133
TFAM
Transcription factor A, mitochondrial
111.21
68.59
0.310
47.20


75139
ARFIP2
ADP-ribosylation factor interacting protein 2 (arfaptin 2)
178.80
116.43
0.345
37.76


75189
DAP
Death-associated protein
217.73
94.24
0.103
143.76


75227
NDUFA9
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39
290.29
122.15
0.138
97.37


75243
BRD2
Bromodomain containing 2
301.76
102.55
0.069
150.65


75249
ARL6IP1
ADP-ribosylation factor-like 6 interacting protein 1
269.13
69.42
0.172
141.78


75254
IRF3
Interferon regulatory factor 3
131.45
93.03
0.345
57.56


75318
TUBA4A
Tubulin, alpha 4a
346.93
95.88
0.276
72.41


75348
PSME1
Proteasome (prosome, macropain) activator subunit 1 (PA28
196.67
85.95
0.138
139.00




alpha)


75438
QDPR
Quinoid dihydropteridine reductase
239.93
101.27
0.345
88.56


75527
ADSL
Adenylosuccinate lyase
187.36
79.69
0.000
46.87


75724
COPB2
Coatomer protein complex, subunit beta 2 (beta prime)
169.19
70.94
0.172
144.95


75798
C20orf111
Chromosome 20 open reading frame 111
138.12
60.97
0.379
52.53


75841
ERP29
Endoplasmic reticulum protein 29
170.38
80.11
0.276
109.13


75890
MBTPS1
Membrane-bound transcription factor peptidase, site 1
143.96
76.79
0.241
59.34


75914
TMED2
Transmembrane emp24 domain trafficking protein 2
257.34
78.55
0.103
201.28


76111
DAG1
Dystroglycan 1 (dystrophin-associated glycoprotein 1)
185.89
66.32
0.310
97.04


76394
ECHS1
Enoyl Coenzyme A hydratase. short chain. 1. mitochondrial
296.18
99.29
0.207
101.19


76480
UBL4A
Ubiquitin-like 4A
177.47
73.71
0.379
41.09


76662
ZDHHC16
Zinc finger. DHHC-type containing 16
138.92
90.05
0.276
57.18


76686
GPX1
Glutathione peroxidase 1
154.93
84.27
0.276
234.43


76847
GANAB
Glucosidase. alpha; neutral AB
371.62
103.22
0.138
252.72


77060
PSMB6
Proteasome (prosome, macropain) subunit. beta type. 6
258.61
103.69
0.172
150.18


77269
GNAI2
Guanine nucleotide binding protein (G protein), alpha inhibiting
454.86
93.08
0.103
370.28




activity polypeptide 2


77313
CDK10
Cyclin-dependent kinase (CDC2-like) 10
98.89
72.87
0.345
69.26


77422
PLP2
Proteolipid protein 2 (colonic epithelium-enriched)
189.36
121.71
0.310
104.42


77558
HMGN3
High mobility group nucleosomal binding domain 3
161.44
94.74
0.207
171.44


77578
USP9X
Ubiquitin specific peptidase 9, X-linked (fat facets-like, Drosophila)
143.39
67.26
0.310
52.03


77793
CSK
C-src tyrosine kinase
222.19
95.17
0.310
68.74


77897
SF3A3
Splicing factor 3a, subunit 3, 60 kDa
169.65
127.16
0.276
81.46


77961
HLA-B
Major histocompatibility complex, class I, B
851.44
157.10
0.103
105.86


77978

Hypothetical protein DKFZp761I2123
115.47
65.78
0.345
70.16


78466
PSMD8
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
274.96
128.74
0.241
119.08


78601
UROD
Uroporphyrinogen decarboxylase
187.65
84.63
0.103
96.65


78771
PGK1
Phosphoglycerate kinase 1
681.19
86.72
0.034
423.67


78880
ILVBL
IlvB (bacterial acetolactate synthase)-like
185.37
153.08
0.379
101.11


78888
DBI
Diazepam binding inhibitor (GABA receptor modulator, acyl-
220.96
127.35
0.241
166.57




Coenzyme A binding protein)


78989
ADH5
Alcohol dehydrogenase 5 (class III), chi polypeptide
179.39
72.64
0.034
89.94


79064
DHPS
Deoxyhypusine synthase
164.95
100.52
0.241
47.03


79081
PPP1CC
Protein phosphatase 1, catalytic subunit. gamma isoform
318.25
84.70
0.103
100.43


79088
RCN2
Reticulocalbin 2, EF-hand calcium binding domain
150.90
75.39
0.207
99.10


79101
CCNG1
Cyclin G1
240.04
67.65
0.069
82.44


79110
NCL
Nucleolin
293.04
63.35
0.034
210.54


79322
QARS
Glutaminyl-tRNA synthetase
402.46
67.92
0.138
149.07


79335
SMARCD1
SWI/SNF related. matrix associated. actin dependent regulator of
146.36
68.95
0.241
54.24




chromatin, subfamily d, member 1


79387
PSMC5
Proteasome (prosome, macropain) 26S subunit, ATPase. 5
243.74
74.96
0.138
158.29


79402
POLR2C
Polymerase (RNA) Il (DNA directed) polypeptide C, 33 kDa
146.42
65.99
0.241
62.49


79411
RPA2
Replication protein A2. 32 kDa
179.33
111.72
0.345
81.59


79625
C20orf149
Chromosome 20 open reading frame 149
361.43
94.87
0.310
218.44


80545
RPL37
Ribosomal protein L37
755.77
355.66
0.103
2167.23


80919
SYPL1
Synaptophysin-like 1
215.72
101.08
0.207
132.20


80986
ATP5G1
ATP synthase, H+ transporting, mitochondrial F0 complex, subuni
209.65
91.99
0.276
223.23




c (subunit 9), isoform 1


81328
NFKBIA
Nuclear factor of kappa light polypeptide gene enhancer in B-cells
186.76
120.33
0.345
367.44




inhibitor, alpha


81424
SUMO1
SMT3 suppressor of mif two 3 homolog 1 (yeast)
313.72
89.00
0.034
338.47


81848
RAD21
RAD21 homolog (S. pombe)
368.76
164.73
0.103
102.70


81964
SEC24C
SEC24 related gene family, member C (S. cerevisiae)
186.43
96.07
0.241
56.08


82201
CSNK2A2
Casein kinase 2, alpha prime polypeptide
123.76
72.38
0.310
77.63


82327
GSS
Glutathione synthetase
184.39
77.08
0.138
47.74


82719
YIPF6
Yip1 domain family, member 6
123.85
72.31
0.379
40.25


82793
PSMB3
Proteasome (prosome. macropain) subunit, beta type, 3
158.41
64.83
0.138
168.49


82887
PPP1R11
Protein phosphatase 1, regulatory (inhibitor) subunit 11
190.42
75.63
0.241
36.52


82890
DAD1
Defender against cell death 1
202.51
132.00
0.310
176.07


82916
CCT6A
Chaperonin containing TCP1, subunit 6A (zeta 1)
407.59
75.69
0.034
155.89


82927
AMPD2
Adenosine monophosphate deaminase 2 (isoform L)
148.16
149.07
0.345
62.69


83190
FASN
Fatty acid synthase
562.35
101.57
0.241
249.20


83347
AAMP
Angio-associated, migratory cell protein
224.46
80.95
0.138
75.73


83383
PRDX4
Peroxiredoxin 4
152.24
74.89
0.379
62.85


83734
STX4
Syntaxin 4
117.13
61.41
0.276
65.02


83753
SNRPB
Small nuclear ribonucleoprotein polypeptides B and B1
874.09
87.85
0.138
206.87


83765
DHFR
Dihydrofolate reductase
111.62
78.02
0.310
60.49


83916
NDUFA5
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13
455.28
149.11
0.207
146.78


84359
GABARAP
GABA(A) receptor-associated protein
190.65
77.34
0.138
153.83


84753
NT5DC2
5′-nucleotidase domain containing 2
158.64
96.33
0.310
142.25


85155
ZFP36L1
Zinc finger protein 36, C3H type-like 1
196.81
98.76
0.207
254.51


85769
DNTTIP2
Deoxynucleotidyltransferase, terminal. interacting protein 2
105.55
51.70
0.379
54.58


85962
CTF8
Chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
170.29
139.62
0.276
49.58


86131
FADD
Fas (TNFRSF6)-associated via death domain
158.82
101.13
0.172
69.23


87752
MSN
Moesin
275.46
95.27
0.103
181.99


89545
PSMB4
Proteasome (prosome, macropain) subunit, beta type. 4
463.81
87.69
0.034
224.28


89643
TKT
Transketolase (Wernicke-Korsakoff syndrome)
588.97
97.80
0.103
201.22


89649
EPHX1
Epoxide hydrolase 1, microsomal (xenobiotic)
238.26
88.30
0.345
128.11


89781
UBTF
Upstream binding transcription factor. RNA polymerase I
121.71
54.79
0.241
117.56


89864
SKIV2L
Superkiller viralicidic activity 2-like (S. cerevisiae)
132.50
66.99
0.379
46.22


90061
PGRMC1
Progesterone receptor membrane component 1
194.16
93.36
0.172
99.80


90093
HSPA4
Heat shock 70 kDa protein 4
149.59
74.25
0.172
62.89


90107
ADRM1
Adhesion regulating molecule 1
246.89
81.18
0.172
107.95


90443
NDUFS8
NADH dehydrogenase (ubiquinone) Fe—S protein 8, 23 kDa
153.66
106.13
0.207
151.21




(NADH-coenzyme Q reductase)


91142
KHSRP
KH-type splicing regulatory protein (FUSE binding protein 2)
237.57
80.25
0.241
191.59


91531
MLLT6
Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog,
163.44
99.71
0.207
48.01





Drosophila); translocated to, 6



93659
PDIA4
Protein disulfide isomerase family A. member 4
221.64
92.23
0.207
119.28


93832
TMCO1
Transmembrane and coiled-coil domains 1
215.75
94.44
0.138
138.95


95577
CDK4
Cyclin-dependent kinase 4
512.67
181.54
0.103
70.34


96530
COX11
COX11 homolog, cytochrome c oxidase assembly protein (yeast)
133.50
61.61
0.241
44.09


96852
EDC3
Enhancer of mRNA decapping 3 homolog (S. cerevisiae)
315.49
327.98
0.345
49.12


96996
HNRPA0
Heterogeneous nuclear ribonucleoprotein A0
203.93
87.67
0.172
175.06


97616
SH3GL1
SH3-domain GRB2-like 1
271.66
106.70
0.069
109.70


97887
RCN1
Reticulocalbin 1, EF-hand calcium binding domain
176.05
78.51
0.207
128.29


98751
FUBP3
Far upstream element (FUSE) binding protein 3
115.91
57.99
0.276
79.69


98791
ACTR1B
ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
154.61
74.84
0.276
46.33


102696
MCTS1
Malignant T cell amplified sequence 1
182.20
108.79
0.379
89.54


102798
PSMA1
Proteasome (prosome, macropain) subunit, alpha type. 1
222.80
73.98
0.069
117.56


103561
ARL6IP4
ADP-ribosylation-like factor 6 interacting protein 4
177.34
82.48
0.172
125.24


103834
TMEM106C
Transmembrane protein 106C
164.57
88.83
0.138
88.84


104839
TIMP2
TIMP metallopeptidase inhibitor 2
266.07
83.65
0.172
326.45


105547
NPDC1
Neural proliferation, differentiation and control, 1
184.55
89.27
0.345
240.66


106185
RALGDS
Ral guanine nucleotide dissociation stimulator
113.28
56.31
0.379
94.40


106876
ATP6V0D1
ATPase. H+ transporting. lysosomal 38 kDa. V0 subunit d isoform
157.31
76.54
0.207
90.28




1


106909
ANAPC13
Anaphase promoting complex subunit 13
409.28
124.92
0.310
82.82


107003
CCNB1IP1
Cyclin B1 interacting protein 1
198.64
135.06
0.207
2470.25


107101
C1orf86
Chromosome 1 open reading frame 86
132.02
90.12
0.310
102.36


107387
C7orf20
Chromosome 7 open reading frame 20
158.14
146.65
0.379
85.47


107393
CLDND1
Claudin domain containing 1
182.62
98.17
0.276
55.41


108029
SH3BGRL
SH3 domain binding glutamic acid-rich protein like
217.90
129.37
0.138
173.06


108080
CSRP1
Cysteine and glycine-rich protein 1
226.87
81.65
0.172
326.55


108371
E2F4
E2F transcription factor 4. p107/p130-binding
124.23
53.45
0.207
64.69


108408
APH1A
Anterior pharynx defective 1 homolog A (C. elegans)
214.52
73.54
0.276
115.29


108957
RPS27L
Ribosomal protein S27-like
214.43
105.97
0.345
197.20


108969
C19orf56
Chromosome 19 open reading frame 56
165.48
98.67
0.207
145.21


109051
SH3BGRL3
SH3 domain binding glutamic acid-rich protein like 3
190.53
95.77
0.207
158.45


109052
C14orf2
Chromosome 14 open reading frame 2
254.93
147.67
0.310
191.48


109672
ST6GALNAC6
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-
113.89
58.27
0.379
67.37




acetylgalactosaminide alpha-2,6-sialyltransferase 6


109798
C6orf48
Chromosome 6 open reading frame 48
221.40
98.21
0.207
94.17


110695
SF3B5
Splicing factor 3b, subunit 5, 10 kDa
161.11
93.81
0.310
280.95


110849
ESRRA
Estrogen-related receptor alpha
243.72
107.89
0.310
78.88


111286
MRPS11
Mitochondrial ribosomal protein S11
118.62
52.84
0.207
53.04


111577
ITM2C
Integral membrane protein 2C
293.83
115.98
0.138
172.80


111801
ARS2
ARS2 protein
213.16
99.08
0.276
50.72


112058
SIVA1
SIVA1, apoptosis-inducing factor
161.23
58.99
0.345
75.36


112318
TOMM7
Translocase of outer mitochondrial membrane 7 homolog (yeast)
406.79
253.67
0.276
376.30


112955
NUDT5
Nudix (nucleoside diphosphate linked moiety X)-type motif 5
197.68
94.29
0.276
63.30


114033
SSR1
Signal sequence receptor, alpha (translocon-associated protein
161.00
68.79
0.207
55.66




alpha)


114286
CD9
CD9 antigen (p24)
239.20
130.06
0.172
227.35


114412
TXNL1
Thioredoxin-like 1
117.31
93.59
0.207
120.38


115474
RFC3
Replication factor C (activator 1) 3, 38 kDa
175.70
158.89
0.345
40.56


115792
EXOSC7
Exosome component 7
134.25
74.20
0.207
51.01


116448
GLS
Glutaminase
192.13
67.06
0.379
38.83


117176
PABPN1
Poly(A) binding protein, nuclear 1
124.05
80.27
0.276
277.14


117715
ST5
Suppression of tumorigenicity 5
101.33
55.39
0.379
68.40


118110
BST2
Bone marrow stromal cell antigen 2
216.68
84.28
0.241
177.54


118400
FSCN1
Fascin homolog 1, actin-bundling protein (Strongylocentrotus
684.83
91.57
0.241
277.47





purpuratus)



118463
PNPLA2
Patatin-like phospholipase domain containing 2
162.21
88.10
0.345
139.17


118638
NME1
Non-metastatic cells 1, protein (NM23A) expressed in
290.12
103.60
0.172
202.48


118722
FUT8
Fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
118.38
149.55
0.379
65.86


118964
GATAD2A
GATA zinc finger domain containing 2A
124.22
85.19
0.310
40.82


118983
GSDMDC1
Gasdermin domain containing 1
184.87
95.75
0.379
147.97


119177
ARF3
ADP-ribosylation factor 3
239.68
76.49
0.138
139.61


119192
H2AFZ
H2A histone family, member Z
453.31
159.40
0.103
221.14


119251
UQCRC1
Ubiquinol-cytochrome c reductase core protein I
442.99
74.48
0.103
152.44


119591
AP2S1
Adaptor-related protein complex 2. sigma 1 subunit
177.74
82.21
0.241
121.28


119598
RPL3
Ribosomal protein L3
3807.92
79.61
0.000
1976.38


120323
LOC26010
Viral DNA polymerase-transactivated protein 6
128.35
69.74
0.310
119.93


121088
NUP153
Nucleoporin 153 kDa
123.13
79.84
0.310
76.28


121549
CDIPT
CDP-diacylglycerol-inositol 3-phosphatidyltransferase
177.98
81.88
0.241
115.81




(phosphatidylinositol synthase)


122363
WIPI2
WD repeat domain, phosphoinositide interacting 2
186.76
89.61
0.138
78.30


122523
SND1
Staphylococcal nuclease domain containing 1
355.50
74.36
0.034
106.76


124126
ARPC1A
Actin related protein 2/3 complex. subunit 1 A. 41 kDa
206.46
81.13
0.103
122.85


124147
FBXL11
PRO1880 protein
144.07
78.43
0.207
52.87


124246
C10orf119
Chromosome 10 open reading frame 119
144.50
66.52
0.172
76.17


124366
BBX
Bobby sox homolog (Drosophila)
147.83
66.94
0.345
56.68


125113
CCT8
Chaperonin containing TCP1, subunit 8 (theta)
187.53
84.03
0.034
136.62


125867
EVL
Enah/Vasp-like
170.08
84.54
0.276
196.70


125898
GNAS
GNAS complex locus
669.01
93.40
0.069
471.82


126497
AEBP2
AE binding protein 2
102.85
77.77
0.379
126.95


126774
DTL
Denticleless homolog (Drosophila)
160.79
71.32
0.379
58.18


126938
NAPA
N-ethylmaleimide-sensitive factor attachment protein, alpha
196.92
84.26
0.069
106.30


127092
DHX38
DEAH (Asp-Glu-Ala-His) box polypeptide 38
168.85
103.87
0.379
51.60


127249
SNF8
SNF8, ESCRT-II complex subunit. homolog (S. cerevisiae)
134.67
80.08
0.310
125.84


127386
MAMDC2
MAM domain containing 2
147.47
78.47
0.241
343.27


127764
RAB5C
RAB5C, member RAS oncogene family
242.33
112.45
0.276
245.24


128065
CTSC
Cathepsin C
238.81
102.05
0.207
76.06


128199
SEPT11
Septin 11
159.83
63.97
0.241
90.00


128548
WDR1
WD repeat domain 1
267.90
69.81
0.069
103.72


129634
CINP
Cyclin-dependent kinase 2-interacting protein
104.53
70.89
0.345
34.81


129673
EIF4A1
Eukaryotic translation initiation factor 4A. isoform 1
1492.15
82.19
0.000
380.49


130031
TRIO
Triple functional domain (PTPRF interacting)
142.59
75.94
0.310
334.92


130098
DDX23
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
188.55
94.45
0.172
50.98


130293
CROP
Cisplatin resistance-associated overexpressed protein
152.55
84.06
0.207
191.28


130413
TM9SF2
Transmembrane 9 superfamily member 2
210.83
99.09
0.103
49.93


131226
BNIP3L
BCL2/adenovirus E1B 19 kDa interacting protein 3-like
192.67
70.38
0.241
50.95


132497
PRNPIP
Prion protein interacting protein
168.32
67.74
0.310
103.21


132513
HSD17B12
Hydroxysteroid (17-beta) dehydrogenase 12
137.10
95.65
0.207
48.15


133892
TPM1
Tropomyosin 1 (alpha)
606.98
169.48
0.207
189.30


134074
SLC35E1
Solute carrier family 35, member E1
110.83
70.67
0.345
72.41


134688
PSMD13
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
304.05
104.85
0.207
57.48


135406
CEBPZ
CCAAT/enhancer binding protein zeta
126.72
64.41
0.207
51.10


136905
HUWE1
HECT, UBA and WWE domain containing 1
196.13
66.09
0.138
75.28


136947
RALY
RNA binding protein. autoantigenic (hnRNP-associated with lethal
339.69
92.28
0.069
169.57




yellow homolog (mouse))


137510
NCOR2
Nuclear receptor co-repressor 2
243.82
126.40
0.207
47.10


138860
ARHGAP1
Rho GTPase activating protein 1
106.56
50.87
0.310
92.98


139896
MAEA
Macrophage erythroblast attacher
203.45
84.45
0.276
56.94


140452
M6PRBP1
Mannose-6-phosphate receptor binding protein 1
381.09
119.04
0.138
119.07


142442
HP1BP3
Heterochromatin protein 1. binding protein 3
161.28
66.57
0.207
72.01


143187
DDX49
DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
144.35
67.10
0.241
59.63


143766
ATN1
Atrophin 1
184.56
86.85
0.207
76.29


143873
S100A10
S100 calcium binding protein A10 (annexin II ligand, calpactin I,
255.56
111.88
0.172
675.77




light polypeptide (p11))


144058
NAT9
N-acetyltransferase 9
99.56
67.02
0.345
45.72


144468
CHID1
Chitinase domain containing 1
179.03
105.35
0.241
103.94


144835
EEF1G
Eukaryotic translation elongation factor 1 gamma
4056.39
76.55
0.000
1929.11


144868
VTI1B
Vesicle transport through interaction with t-SNAREs homolog 1B
103.57
54.85
0.310
47.28




(yeast)


144941
LRRC41
Leucine rich repeat containing 41
152.40
71.74
0.172
45.67


144949
ZNF313
Zinc finger protein 313
145.79
62.78
0.138
63.37


144980
SCAMP4
Secretory carrier membrane protein 4
127.39
96.37
0.345
60.46


145049
PLEKHM2
Pleckstrin homology domain containing. family M (with RUN
205.68
86.88
0.138
45.61




domain) member 2


145442
MAP2K1
Mitogen-activated protein kinase kinase 1
101.59
55.16
0.241
57.21


145575
UBL3
Ubiquitin-like 3
157.68
79.65
0.345
90.10


146070
TPM3
Tropomyosin 3
695.80
102.33
0.000
175.65


146393
HERPUD1
Homocysteine-inducible, endoplasmic reticulum stress-inducible.
226.44
86.29
0.172
101.04




ubiquitin-like domain member 1


146602
UQCRQ
Ubiquinol-cytochrome c reductase. complex III subunit VII. 9.5 kDa
193.38
169.43
0.276
312.78


146804
SPIN1
Spindlin 1
127.00
68.69
0.345
46.25


146806
CUL1
Cullin 1
120.27
57.50
0.207
69.33


147433
PCNA
Proliferating cell nuclear antigen
258.31
133.96
0.172
92.79


148078
UBR4
Ubiquitin protein ligase E3 component n-recognin 4
144.18
73.44
0.138
81.01


148272
CCM2
Cerebral cavernous malformation 2
199.79
94.01
0.207
76.34


148330
ARF4
ADP-ribosylation factor 4
385.93
105.50
0.138
153.40


148340
PTPRG
Protein tyrosine phosphatase, receptor type, G
1592.61
150.52
0.069
252.27


148670
RHOBTB1
Rho-related BTB domain containing 1
116.95
99.14
0.345
47.31


149004
FBXO31
F-box protein 31
141.63
81.88
0.379
71.24


149957
RPS6KA1
Ribosomal protein S6 kinase, 90 kDa, polypeptide 1
146.89
140.85
0.310
62.80


149983
PEX14
Peroxisomal biogenesis factor 14
132.69
140.50
0.241
43.40


150107
BIRC6
Baculoviral IAP repeat-containing 6 (apollon)
149.90
66.77
0.345
78.67


150540
TMEM112B
Transmembrane protein 112B
180.63
177.93
0.379
53.76


150580
EIF1
Eukaryotic translation initiation factor 1
458.80
84.42
0.034
865.15


150837
TXNDC5
Thioredoxin domain containing 5
483.23
126.33
0.034
99.46


151134
OXA1L
Oxidase (cytochrome c) assembly 1-like
238.54
70.29
0.103
62.00


151220
PALLD
Palladin, cytoskeletal associated protein
198.94
75.04
0.345
113.44


151413
GMFB
Glia maturation factor beta
190.53
95.31
0.379
113.32


151787
EFTUD2
Elongation factor Tu GTP binding domain containing 2
326.78
81.27
0.069
105.28


152536
PSMD6
Proteasome (prosome, macropain) 26S subunit, non-ATPase. 6
134.14
63.78
0.241
75.62


153177
RPS28
Ribosomal protein S28
437.53
297.35
0.241
1095.00


154023
TXNDC4
Thioredoxin domain containing 4 (endoplasmic reticulum)
133.74
72.55
0.345
51.92


154073
SLC35B1
Solute carrier family 35. member B1
99.61
61.75
0.379
52.53


155165
ZFPL1
Zinc finger protein-like 1
156.23
92.72
0.310
64.84


155218
HNRPUL1
Heterogeneous nuclear ribonucleoprotein U-like 1
474.38
82.52
0.000
175.01


155396
NFE2L2
Nuclear factor (erythroid-derived 2)-like 2
182.54
63.38
0.172
76.81


155829
TBC1D9B
TBC1 domain family, member 9B (with GRAM domain)
189.13
67.14
0.241
61.75


156171
PSMC6
Proteasome (prosome, macropain) 26S subunit, ATPase. 6
202.42
86.99
0.172
72.51


156367
RPS29
Ribosomal protein S29
735.43
357.07
0.241
2469.70


156667
CALCOCO
Calcium binding and coiled-coil domain 1
150.95
83.49
0.276
48.15


157160
MRPS34
Mitochondrial ribosomal protein S34
163.79
79.67
0.276
94.71


157351
GTPBP9
GTP-binding protein 9 (putative)
256.77
85.59
0.207
86.88


157379
H2AFV
H2A histone family. member V
212.94
72.40
0.138
196.03


157394
HAGH
Hydroxyacylglutathione hydrolase
110.09
79.63
0.345
58.25


159014
PRPF4B
PRP4 pre-mRNA processing factor 4 homolog B (yeast)
101.54
63.09
0.379
87.15


159118
AMD1
Adenosylmethionine decarboxylase 1
179.16
87.63
0.241
87.60


159130
RAF1
V-raf-1 murine leukemia viral oncogene homolog 1
148.50
123.34
0.138
75.30


159161
ARHGDIA
Rho GDP dissociation inhibitor (GDI) alpha
781.87
98.28
0.138
124.37


159699
FBXO21
F-box protein 21
112.15
59.46
0.345
78.43


159799
THRAP2
Thyroid hormone receptor associated protein 2
135.37
68.96
0.345
57.41


160958
CDC37
CDC37 cell division cycle 37 homolog (S. cerevisiae)
297.55
114.77
0.069
93.25


161357
PDHB
Pyruvate dehydrogenase (lipoamide) beta
188.51
80.70
0.172
57.45


162032
HBP1
HMG-box transcription factor 1
119.42
40.70
0.345
76.14


162233
CHD4
Chromodomain helicase DNA binding protein 4
294.77
95.15
0.207
209.93


162877
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2
181.10
101.47
0.207
88.79


163645
MOCS2
Molybdenum cofactor synthesis 2
123.58
91.10
0.276
59.81


163776
UBE2J1
Ubiquitin-conjugating enzyme E2. J1 (UBC6 homolog. yeast)
229.95
250.60
0.310
47.01


163893
PICALM
Phosphatidylinositol binding clathrin assembly protein
153.29
84.25
0.310
98.35


165195
VAPA
VAMP (vesicle-associated membrane protein)-associated protein
170.73
76.58
0.069
115.35




A. 33 kDa


166011
CTNND1
Catenin (cadherin-associated protein), delta 1
181.39
76.07
0.138
75.94


166204
PHF1
PHD finger protein 1
128.96
77.28
0.345
43.53


166463
HNRPU
Heterogeneous nuclear ribonucleoprotein U (scaffold attachment
279.34
89.13
0.034
185.87




factor A)


166924
SEC13
SEC13 homolog (S. cerevisiae)
164.56
70.57
0.207
99.75


166975
SFRS5
Splicing factor, arginine/serine-rich 5
241.85
95.20
0.138
153.47


167535
SRP54
Signal recognition particle 54 kDa
132.08
105.35
0.241
43.01


168073
TRPC4AP
Transient receptor potential cation channel, subfamily C, member
174.32
67.74
0.241
95.49




4 associated protein


168799
METTL3
Methyltransferase like 3
133.88
65.22
0.172
71.62


169611
DIABLO
Diablo homolog (Drosophila)
167.55
69.66
0.276
41.81


169718
CNN2
Calponin 2
263.90
111.61
0.138
133.00


170107
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide
112.20
75.09
0.241
76.06


170131
NFIC
Nuclear factor I/C (CCAAT-binding transcription factor)
128.62
75.64
0.379
73.22


170553
CNOT7
CCR4-NOT transcription complex, subunit 7
119.98
77.62
0.276
62.09


170622
CFL1
Cofilin 1 (non-muscle)
1372.26
96.41
0.034
1717.53


171626
SKP1A
S-phase kinase-associated protein 1A (p19A)
457.12
128.78
0.138
403.46


172550
PTBP1
Polypyrimidine tract binding protein 1
554.08
85.76
0.103
138.65


172755
BRP44L
Brain protein 44-like
150.10
97.09
0.379
90.49


172928
COL1A1
Collagen, type I, alpha 1
657.85
170.49
0.276
1790.49


173024
NUB1
Negative regulator of ubiquitin-like proteins 1
102.38
55.09
0.276
49.89


173162
COX4NB
COX4 neighbor
259.86
100.34
0.310
48.81


173381
DPYSL2
Dihydropyrimidinase-like 2
213.62
76.62
0.310
337.96


173464
FKBP8
FK506 binding protein 8, 38 kDa
446.43
105.38
0.103
241.30


173611
NDUFS2
NADH dehydrogenase (ubiquinone) Fe—S protein 2, 49 kDa
308.98
100.60
0.069
103.79




(NADH-coenzyme Q reductase)


173705
LOC40115
HCV F-transactivated protein 1
155.92
91.92
0.207
105.45


173724
CKB
Creatine kinase, brain
395.40
117.54
0.310
500.02


174050
EDF1
Endothelial differentiation-related factor 1
163.11
77.20
0.345
295.84


174195
IFITM2
Interferon induced transmembrane protein 2 (1-8D)
439.92
224.90
0.276
123.33


175473
AK1
Adenylate kinase 1
115.05
96.67
0.345
154.31


175955
YTHDC1
YTH domain containing 1
114.99
56.92
0.310
51.24


177530
ATP5E
ATP synthase, H+ transporting, mitochondrial F1 complex, epsilotext missing or illegible when filed
343.57
172.81
0.207
738.25




subunit


177766
PARP1
Poly (ADP-ribose) polymerase family, member 1
260.77
114.80
0.103
88.33


178551
RPL8
Ribosomal protein L8
1600.62
93.63
0.034
951.00


178728
MBD3
Methyl-CpG binding domain protein 3
226.33
93.86
0.241
150.69


179986
FLOT1
Flotillin 1
239.64
133.66
0.241
173.68


180141
CFL2
Cofilin 2 (muscle)
236.22
198.55
0.345
58.91


180312
MRPS16
Mitochondrial ribosomal protein S16
148.32
71.61
0.276
43.03


180414
HSPA8
Heat shock 70 kDa protein 8
1204.20
99.10
0.000
543.94


180877
H3F3B
H3 histone, family 3B (H3.3B)
701.35
71.33
0.000
322.18


180903
NCAPH2
Non-SMC condensin II complex, subunit H2
273.31
91.43
0.310
66.01


180909
PRDX1
Peroxiredoxin 1
973.56
146.34
0.138
346.95


180933
CXXC1
CXXC finger 1 (PHD domain)
127.97
58.18
0.345
51.48


181046
DUSP3
Dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-
168.09
115.04
0.207
74.49




related)


181112
MED4
Mediator of RNA polymerase II transcription, subunit 4 homolog
208.67
152.66
0.276
52.19




(yeast)


181163
HMGN2
High-mobility group nucleosomal binding domain 2
798.73
84.12
0.000
504.02


181244
HLA-A
Major histocompatibility complex, class I. A
874.95
96.35
0.138
945.29


181368
PRPF8
PRP8 pre-mRNA processing factor 8 homolog (yeast)
308.98
76.46
0.138
57.52


181444
TMEM9
Transmembrane protein 9
210.70
80.44
0.172
99.45


182255
NHP2L1
NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
236.95
69.85
0.069
216.97


182626
C22orf5
Chromosome 22 open reading frame 5
189.45
87.32
0.310
85.24


182885
SLC35B2
Solute carrier family 35, member B2
197.27
131.49
0.241
71.21


183684
EIF4G2
Eukaryotic translation initiation factor 4 gamma, 2
571.05
99.96
0.069
244.19


183706
ADD1
Adducin 1 (alpha)
210.75
70.37
0.138
124.62


183800
RANGAP1
Ran GTPase activating protein 1
330.34
92.47
0.172
82.36


183850
DCTD
DCMP deaminase
140.58
59.00
0.345
50.00


183994
PPP1CA
Protein phosphatase 1, catalytic subunit, alpha isoform
374.52
71.55
0.103
122.79


184062
C20orf24
Chromosome 20 open reading frame 24
161.95
77.22
0.310
106.44


184211
PMPCB
Peptidase (mitochondrial processing) beta
177.15
64.50
0.138
44.05


184233
HSPA9
Heat shock 70 kDa protein 9 (mortalin)
311.24
80.92
0.034
155.04


184492
ELAVL1
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
130.66
66.07
0.207
61.10




antigen R)


185172
GNB2
Guanine nucleotide binding protein (G protein), beta polypeptide 2
420.89
178.43
0.172
146.97


185597
SPG7
Spastic paraplegia 7. paraplegin (pure and complicated autosomal
167.10
102.17
0.207
85.24




recessive)


187199
MALAT1
Metastasis associated lung adenocarcinoma transcript 1 (non-
3984.95
243.42
0.241
982.17




coding RNA)


187635
RPS15A
Chromosome 20 open reading frame 19
705.06
435.58
0.138
584.60


187763
BRD4
Bromodomain containing 4
226.90
138.89
0.241
92.81


187866
NPTN
Neuroplastin
120.12
53.64
0.379
127.00


187946
SLC20A1
Solute carrier family 20 (phosphate transporter). member 1
141.36
96.84
0.207
79.95


188501
PAFAH1B2
Platelet-activating factor acetylhydrolase. isoform Ib. beta subunit
149.54
78.69
0.138
75.71




30 kDa


188614
PLEKHA5
Pleckstrin homology domain containing. family A member 5
115.79
66.94
0.379
53.09


188879
RBM6
RNA binding motif protein 6
100.43
54.89
0.379
79.10


188882
NUDT3
Nudix (nucleoside diphosphate linked moiety X)-type motif 3
129.54
63.13
0.276
41.12


189075
TWF1
Twinfilin. actin-binding protein. homolog 1 (Drosophila)
164.98
70.22
0.310
103.18


189119
CXXC5
CXXC finger 5
97.63
45.99
0.345
191.46


189329
SMURF1
SMAD specific E3 ubiquitin protein ligase 1
126.19
77.52
0.379
46.81


189716
NDUFAB1
NADH dehydrogenase (ubiquinone) 1. alpha/beta subcomplex, 1.
224.85
87.06
0.276
59.73




8 kDa


189772
CCT2
Chaperonin containing TCP1, subunit 2 (beta)
269.61
95.66
0.069
124.53


190028
GSTO1
Glutathione S-transferase omega 1
178.51
92.79
0.241
87.26


190086
MRCL3
Myosin regulatory light chain MRCL3
469.83
322.83
0.172
204.74


190334
RAP1A
RAP1A, member of RAS oncogene family
130.79
76.47
0.310
49.76


190384
COPS4
COP9 constitutive photomorphogenic homolog subunit 4
163.76
100.38
0.138
59.12




(Arabidopsis)


190722
C19orf62
Chromosome 19 open reading frame 62
218.33
85.79
0.207
75.54


190904
STRN4
Striatin. calmodulin binding protein 4
183.13
100.67
0.241
74.69


191186
TTC17
Tetratricopeptide repeat domain 17
125.42
63.68
0.310
43.91


191346
SEPT7
Septin 7
318.59
80.82
0.103
196.34


191518
DHX9
DEAH (Asp-Glu-Ala-His) box polypeptide 9
239.90
67.53
0.241
61.56


191987
UBE2J2
Ubiquitin-conjugating enzyme E2. J2 (UBC6 homolog. yeast)
125.95
71.90
0.207
35.20


192316
CDC2L1
Cell division cycle 2-like 1 (PITSLRE proteins)
102.48
85.83
0.379
83.41


192374
HSP90B1
Heat shock protein 90 kDa beta (Grp94), member 1
388.12
88.21
0.034
487.07


192425
EIF3S8
Eukaryotic translation initiation factor 3, subunit 8, 110 kDa
1001.22
91.36
0.103
382.10


193118
ZMIZ1
Zinc finger. MIZ-type containing 1
125.42
71.59
0.345
103.91


193163
BIN1
Bridging integrator 1
216.65
88.45
0.241
86.88


193491
TUBB6
Tubulin. beta 6
255.15
94.70
0.241
85.60


194329
TCEAL4
Transcription elongation factor A (SII)-like 4
110.76
60.41
0.207
98.50


194718
ZRANB2
Zinc finger. RAN-binding domain containing 2
170.63
70.34
0.207
60.86


195464
FLNA
Filamin A, alpha (actin binding protein 280)
554.90
92.75
0.172
45.29


195642
RNF213
Ring finger protein 213
146.02
74.10
0.379
49.42


196983
SSFA2
Sperm specific antigen 2
238.74
197.56
0.241
41.49


198281
PKM2
Pyruvate kinase, muscle
3044.33
101.80
0.000
562.77


199561
RANBP2
RAN binding protein 2
134.09
59.13
0.379
78.36


199625
HAX1
HCLS1 associated protein X-1
243.58
94.74
0.138
231.23


200063
HDAC7A
Histone deacetylase 7A
252.27
159.81
0.241
66.57


200600
SCAMP3
Secretory carrier membrane protein 3
165.58
75.71
0.207
82.26


200804
SDCBP
Syndecan binding protein (syntenin)
355.16
73.99
0.172
100.60


201253
CKAP5
Cytoskeleton associated protein 5
157.71
77.53
0.069
51.67


201390
WDR45L
WDR45-like
115.15
53.09
0.138
66.73


201712
GLG1
Golgi apparatus protein 1
128.23
88.99
0.310
62.32


202011
CCDC47
Coiled-coil domain containing 47
108.62
67.48
0.172
152.06


202085
VDAC1
Voltage-dependent anion channel 1
179.22
70.07
0.276
154.71


202166
HNRPH1
Heterogeneous nuclear ribonucleoprotein H1 (H)
199.33
74.31
0.069
183.12


202179
SMN2
Survival of motor neuron 1. telomeric
103.17
55.27
0.379
77.19


203099
WAPAL
Wings apart-like homolog (Drosophila)
162.13
143.02
0.345
56.63


203910
SGTA
Small glutamine-rich tetratricopeptide repeat (TPR)-containing.
213.58
79.65
0.138
124.15




alpha


204041
AHSA1
AHA1. activator of heat shock 90 kDa protein ATPase homolog 1
263.29
112.20
0.207
131.33




(yeast)


204773
WDR77
WD repeat domain 77
185.81
74.28
0.172
65.95


205163
MRPL3
Mitochondrial ribosomal protein L3
176.93
58.08
0.069
129.59


206500
CTTN
Cortactin
148.63
96.70
0.310
85.71


206824
MGC71993
Similar to DNA segment, Chr 11, Brigham &amp; Womens
143.54
88.77
0.345
218.52




Genetics 0434 expressed


208597
CTBP1
Hypothetical protein LOC285463
136.74
48.53
0.138
213.99


209983
STMN1
Stathmin 1/oncoprotein 18
619.09
139.81
0.034
198.15


210469
ELMO2
Engulfment and cell motility 2 (ced-12 homolog. C. elegans)
96.39
71.43
0.379
57.31


210532
KIAA0141
KIAA0141
138.36
72.99
0.241
62.91


211463
DNM2
Dynamin 2
195.67
87.32
0.241
81.50


211594
PSMC4
Proteasome (prosome, macropain) 26S subunit, ATPase. 4
469.59
192.26
0.138
67.56


211914
NDUFS7
NADH dehydrogenase (ubiquinone) Fe—S protein 7, 20 kDa
159.44
73.80
0.379
86.83




(NADH-coenzyme Q reductase)


212102
PDIA6
Protein disulfide isomerase family A. member 6
274.17
97.91
0.103
160.42


212395
CIZ1
CDKN1A interacting zinc finger protein 1
272.61
88.59
0.138
50.78


213061
NUCKS1
Nuclear casein kinase and cyclin-dependent kinase substrate 1
304.71
64.96
0.138
231.69


213470
PSMB7
Proteasome (prosome, macropain) subunit. beta type. 7
247.81
65.94
0.034
222.67


213541
LOC55288
Hypothetical LOC552889
136.06
60.14
0.345
67.95


213666
K1AA0460
KIAA0460
96.71
78.04
0.241
68.88


213724
SUPT16H
Suppressor of Ty 16 homolog (S. cerevisiae)
149.27
79.71
0.207
52.16


216653
FBXO9
F-box protein 9
92.77
49.72
0.310
50.09


220950
FOXO3
Forkhead box O3
196.88
112.74
0.276
91.70


221847
SLC38A2
Solute carrier family 38, member 2
204.23
78.33
0.207
281.04


222510
DAZAP1
DAZ associated protein 1
126.05
97.18
0.276
67.85


223141
DDX21
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
255.54
70.08
0.069
103.03


224607
SDC1
Syndecan 1
241.65
87.87
0.276
119.67


226007
RDH11
Retinol dehydrogenase 11 (all-trans and 9-cis)
340.36
135.94
0.172
92.30


226117
H1F0
H1 histone family, member 0
326.85
160.18
0.310
127.49


226755
YWHAH
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
199.21
161.02
0.207
191.85




activation protein. eta polypeptide


227067
ATAD3A
ATPase family, AAA domain containing 3A
254.68
105.30
0.172
57.56


227253
TOMM70A
Translocase of outer mitochondrial membrane 70 homolog A
130.67
67.31
0.172
87.82




(yeast)


227777
PTP4A1
Protein tyrosine phosphatase type IVA, member 1
219.08
115.20
0.138
131.83


229641
SUB1
SUB1 homolog (S. cerevisiae)
300.51
103.71
0.138
147.72


231295
PITPNC1
Phosphatidylinositol transfer protein, cytoplasmic 1
171.09
127.31
0.345
63.03


231616
C19orf53
Chromosome 19 open reading frame 53
162.05
104.55
0.345
102.58


232194
KIAA0174
KIAA0174
204.24
73.78
0.138
84.98


232543
PDCD4
Programmed cell death 4 (neoplastic transformation inhibitor)
126.25
61.41
0.310
189.22


233458
NFYC
Nuclear transcription factor Y, gamma
92.20
51.11
0.345
89.24


233552
CDC2L5
Cell division cycle 2-like 5 (cholinesterase-related cell division
139.27
109.94
0.379
29.61




controller)


233952
PSMA7
Proteasome (prosome, macropain) subunit, alpha type, 7
358.81
133.21
0.069
431.24


234521
MAPKAPK3
Mitogen-activated protein kinase-activated protein kinase 3
185.75
77.03
0.379
59.41


236030
SMARCC2
SWI/SNF related, matrix associated, actin dependent regulator of
198.07
83.50
0.207
34.66




chromatin. subfamily c. member 2


237536
NT5C3L
5′-nucleotidase, cytosolic III-like
160.67
84.27
0.276
95.40


237971
XTP3TPA
XTP3-transactivated protein A
122.34
67.16
0.276
58.94


238839
SCYL1
SCY1-like 1 (S. cerevisiae)
173.16
113.72
0.310
144.41


240170
OBFC2B
Oligonucleotide/oligosaccharide-binding fold containing 2B
136.42
69.86
0.345
96.25


241336
ATPIF1
ATPase inhibitory factor 1
227.40
125.29
0.172
224.03


241543
POLDIP2
Polymerase (DNA-directed), delta interacting protein 2
217.98
81.62
0.138
66.91


241558
ARIH2
Ariadne homolog 2 (Drosophila)
178.45
77.54
0.172
65.16


241575
GNPTG
N-acetylglucosamine-1-phosphate transferase, gamma subunit
117.17
100.69
0.345
73.29


241576
DERL1
Der1-like domain family. member 1
111.58
87.37
0.310
72.57


241579
SERPINH1
Serpin peptidase inhibitor. clade H (heat shock protein 47),
380.44
115.76
0.172
198.12




member 1. (collagen binding protein 1)


242458
SPG21
Spastic paraplegia 21 (autosomal recessive, Mast syndrome)
120.35
59.44
0.310
76.41


242947
DGKI
Diacylglycerol kinase, iota
131.75
120.70
0.379
4086.25


246112
ASCC3L1
Activating signal cointegrator 1 complex subunit 3-like 1
278.46
81.24
0.172
160.68


246310
ATP5J
ATP synthase, H+ transporting, mitochondrial F0 complex. subuni
220.45
113.90
0.276
232.33




F6


246413
CPNE1
RNA binding motif protein 12
392.42
88.16
0.069
93.63


246781
FBXO11
F-box protein 11
141.20
92.55
0.379
48.14


247077
RHOA
Ras homolog gene family, member A
553.79
77.72
0.034
545.41


247186
FBRS
Fibrosin
145.20
107.50
0.379
70.03


247975
HSPD1
Pro-melanin-concentrating hormone-like 1
241.69
85.58
0.207
238.18


248267
MPST
Mercaptopyruvate sulfurtransferase
167.67
112.86
0.276
80.10


248941
TAF9
TAF9 RNA polymerase II. TATA box binding protein (TBP)-
148.14
65.92
0.276
54.96




associated factor, 32 kDa


249600
DLGAP4
Discs, large (Drosophila) homolog-associated protein 4
233.49
169.10
0.276
98.90


250009
ARL8B
ADP-ribosylation factor-like 8B
132.27
55.79
0.379
134.21


250429
SUPT6H
Suppressor of Ty 6 homolog (S. cerevisiae)
162.25
82.76
0.379
44.11


250758
PSMC3
Proteasome (prosome, macropain) 26S subunit, ATPase, 3
391.11
115.64
0.138
111.57


250899
HSBP1
Heat shock factor binding protein 1
214.94
105.83
0.069
141.99


250905
TMEM85
Transmembrane protein 85
156.08
143.74
0.241
77.54


251531
PSMA4
Proteasome (prosome, macropain) subunit, alpha type, 4
739.81
217.34
0.138
172.42


252457
MVD
Mevalonate (diphospho) decarboxylase
170.93
117.34
0.379
65.93


252713
TTC15
Tetratricopeptide repeat domain 15
105.62
56.20
0.345
75.68


252967
C1orf144
Chromosome 1 open reading frame 144
240.90
109.65
0.207
105.98


253726
PAPOLA
Poly(A) polymerase alpha
216.15
65.36
0.172
118.24


253903
STOM
Stomatin
199.17
100.65
0.276
100.22


254042
BAT1
HLA-B associated transcript 1
351.44
89.43
0.069
144.69


255015
VPS24
Vacuolar protein sorting 24 (yeast)
126.82
67.80
0.069
79.90


255093
PFKL
Phosphofructokinase, liver
342.69
81.83
0.207
167.85


255932
XRN2
5′-3′ exoribonuclease 2
166.16
57.70
0.069
53.31


255935
BTG1
B-cell translocation gene 1. anti-proliferative
272.14
115.44
0.138
264.18


255973
EID1
EP300 interacting inhibitor of differentiation 1
227.90
86.79
0.138
174.44


256301
C19orf48
Chromosome 19 open reading frame 48
337.67
84.54
0.207
158.37


256549
NUBP2
Nucleotide binding protein 2 (MinD homolog. E. coli)
200.75
98.94
0.241
76.00


257008
PLD3
Phospholipase D family, member 3
349.21
100.00
0.276
203.69


257341
SAV1
Salvador homolog 1 (Drosophila)
91.57
65.55
0.276
34.40


257761
SH3BP5
SH3-domain binding protein 5 (BTK-associated)
170.93
92.54
0.345
70.17


258551
DNPEP
Aspartyl aminopeptidase
168.16
84.05
0.138
38.05


258563
FEZ2
Fasciculation and elongation protein zeta 2 (zygin II)
190.19
204.72
0.345
67.33


258798
NSMCE4A
Non-SMC element 4 homolog A (S. cerevisiae)
79.52
52.34
0.345
366.69


259461
PALM2-
PALM2-AKAP2 protein
171.91
79.41
0.310
128.63



AKAP2


260603
PIP5K2B
Phosphatidylinositol-4-phosphate 5-kinase. type II, beta
132.75
67.00
0.276
94.30


262823
IARS2
Isoleucyl-tRNA synthetase 2, mitochondrial
139.24
59.53
0.345
118.15


265829
ITGA3
Integrin. alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3
404.31
148.83
0.379
109.76




receptor)


268488
LRRC47
Leucine rich repeat containing 47
115.89
116.32
0.379
54.76


268530
GPS1
Radical fringe homolog (Drosophila)
263.51
64.58
0.138
107.13


268742
POMP
Proteasome maturation protein
213.22
98.49
0.276
212.21


268849
GLO1
Glyoxalase I
293.88
85.24
0.138
179.31


268939
MATR3
Matrin 3
292.73
68.23
0.034
241.08


269528
NAT13
N-acetyltransferase 13
237.37
198.20
0.172
110.90


269577
PTPRA
Protein tyrosine phosphatase, receptor type, A
183.68
82.75
0.207
168.07


269782
GNAQ
Guanine nucleotide binding protein (G protein). q polypeptide
174.12
105.06
0.241
52.13


269944
MTCH2
Mitochondrial carrier homolog 2 (C. elegans)
158.42
74.35
0.103
70.20


270291
ACTN4
Actinin, alpha 4
341.13
108.40
0.172
419.64


270428
SUCLG1
Succinate-CoA ligase, GDP-forming, alpha subunit
242.34
241.99
0.241
106.33


270525
LASS5
LAG1 longevity assurance homolog 5 (S. cerevisiae)
111.31
73.14
0.379
57.78


270869
ZNF410
Zinc finger protein 410
135.77
84.28
0.172
53.74


271135
ATP5C1
ATP synthase, H+ transporting, mitochondrial F1 complex, gammtext missing or illegible when filed
448.47
176.19
0.172
135.97




polypeptide 1


271695
NOB1
NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
111.46
73.07
0.310
47.43


272062
PTPRF
Protein tyrosine phosphatase. receptor type. F
269.10
88.46
0.310
119.22


272168
SERINC3
Serine incorporator 3
121.11
72.44
0.138
39.75


272630
ATP6V1D
ATPase, H+ transporting, lysosomal 34 kDa, V1 subunit D
149.33
85.72
0.207
78.13


272927
SEC23A
Sec23 homolog A (S. cerevisiae)
128.24
74.07
0.379
52.45


273077
TMEM14B
Transmembrane protein 14B
128.20
70.29
0.345
63.88


274184
TFE3
Transcription factor binding to IGHM enhancer 3
111.31
57.20
0.276
57.28


274772
C15orf15
Chromosome 15 open reading frame 15
1163.64
205.16
0.172
82.77


274873
CARS
Cysteinyl-tRNA synthetase
176.72
76.48
0.207
82.54


275243
S100A6
S100 calcium binding protein A6 (calcyclin)
361.59
101.08
0.103
591.93


275775
SEPP1
Selenoprotein P, plasma, 1
543.33
189.21
0.379
121.63


275865
PCNP
PEST-containing nuclear protein
315.34
88.79
0.069
83.52


276878
NUP93
Nucleoporin 93 kDa
101.32
60.26
0.241
65.66


277035
MGLL
Monoglyceride lipase
399.51
211.97
0.379
116.15


277517
C11orf2
Chromosome 11 open reading frame 2
193.83
84.84
0.241
127.65


278186
ARHGEF1
Rho guanine nucleotide exchange factor (GEF) 1
194.28
91.63
0.345
73.95


278362
MEA1
Male-enhanced antigen 1
152.60
83.00
0.276
98.75


278426
PDAP1
PDGFA associated protein 1
184.93
86.49
0.172
106.94


278429
C9orf78
Chromosome 9 open reading frame 78
109.74
79.17
0.276
63.78


278500
GNPDA1
Glucosamine-6-phosphate deaminase 1
174.64
74.75
0.241
80.44


278569
SNX17
Sorting nexin 17
297.66
66.25
0.069
132.92


278573
CD59
CD59 antigen p18-20 (antigen identified by monoclonal antibodies
336.75
91.21
0.138
154.72




16.3A5, EJ16, EJ30, EL32 and G344)


278721
SLC39A7
Solute carrier family 39 (zinc transporter), member 7
147.65
72.58
0.379
71.42


279061
GLOD4
Glyoxalase domain containing 4
148.90
76.66
0.172
65.97


279245
TACC1
Transforming. acidic coiled-coil containing protein 1
186.16
79.86
0.241
103.52


279257
PCMT1
Protein-L-isoaspartate (D-aspartate) O-methyltransferase
172.73
62.20
0.103
102.09


279413
POLDI
Polymerase (DNA directed). delta 1. catalytic subunit 125 kDa
164.91
99.93
0.276
75.52


279529
PRELID1
PRELI domain containing 1
224.95
77.28
0.172
102.94


279583
METTL9
Methyltransferase like 9
183.44
155.70
0.241
146.63


279623
SEPX1
Selenoprotein X, 1
117.70
54.66
0.345
47.48


279640
TPR
Translocated promoter region (to activated MET oncogene)
94.90
66.61
0.310
69.84


279652
MRPL4
Mitochondrial ribosomal protein L4
173.40
73.00
0.276
110.73


279669
TUBG1
Tubulin, gamma 1
169.58
65.01
0.310
72.06


279696
SUMF2
Sulfatase modifying factor 2
149.85
83.02
0.345
127.55


279806
DDX5
RNA-binding protein 45 (RBP45). putative
457.60
87.95
0.103
856.99


279836
COMMD9
COMM domain containing 9
104.98
49.94
0.379
60.58


279920
YWHAB
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
288.39
87.94
0.034
251.99




activation protein. beta polypeptide


279929
TMED9
Transmembrane emp24 protein transport domain containing 9
291.55
91.04
0.069
202.03


280202
SBF1
SET binding factor 1
382.01
317.21
0.310
36.29


280342
PRKAR1A
Protein kinase, cAMP-dependent, regulatory, type I. alpha (tissue
266.02
111.27
0.103
209.46




specific extinguisher 1)


280378
SNRPB2
Small nuclear ribonucleoprotein polypeptide B″
243.47
100.43
0.310
68.06


282410
CALM1
Calmodulin 1 (phosphorylase kinase, delta)
246.78
67.76
0.103
513.80


282700
SPCS2
Signal peptidase complex subunit 2 homolog (S. cerevisiae)
232.99
84.36
0.207
59.54


282901
RBM39
RNA binding motif protein 39
166.92
85.70
0.138
181.79


282998
RBM9
RNA binding motif protein 9
477.00
221.29
0.103
145.15


283111
C140rf124
Chromosome 14 open reading frame 124
168.06
139.52
0.207
73.74


283454
BNIP2
BCL2/adenovirus E1B 19 kDa interacting protein 2
130.03
68.79
0.310
47.89


283521
RHEB
Ras homolog enriched in brain
193.25
113.28
0.310
92.73


283610
ATG4B
ATG4 autophagy related 4 homolog B (S. cerevisiae)
180.36
88.44
0.172
49.24


283652
IDI1
Isopentenyl-diphosphate delta isomerase 1
233.34
102.32
0.241
58.55


283739
UBQLN4
Ubiquitin 4
165.35
84.58
0.207
62.49


284208
ANKRD25
Ankyrin repeat domain 25
124.68
85.84
0.379
46.63


284279
HMOX2
Heme oxygenase (decycling) 2
151.53
85.91
0.310
50.68


284286
MRPS24
Mitochondrial ribosomal protein S24
136.83
77.51
0.345
71.40


284491
PDXK
Pyridoxal (pyridoxine, vitamin B6) kinase
235.50
93.74
0.138
787.92


285354
MAX
MYC associated factor X
109.16
60.60
0.345
64.26


285976
LASS2
LAG1 longevity assurance homolog 2 (S. cerevisiae)
203.17
82.28
0.172
132.14


286221
ARF1
ADP-ribosylation factor 1
704.87
66.67
0.069
199.12


286226
MYO1C
Myosin IC
253.69
114.87
0.310
90.05


288193
KPNA4
Karyopherin alpha 4 (importin alpha 3)
144.60
134.58
0.379
59.34


288856
PFDN5
Prefoldin 5
226.65
96.63
0.103
320.21


288969
NMRAL1
NmrA-like family domain containing 1
126.04
77.91
0.379
34.41


289008
NUS1
Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
157.63
95.67
0.310
68.14





cerevisiae)



289092
COTL1
Coactosin-like 1 (Dictyostelium)
315.93
109.13
0.172
167.69


289123
DCTN2
Dynactin 2 (p50)
261.39
105.34
0.069
89.02


289271
CYC1
Cytochrome c-1
345.69
78.79
0.172
242.81


290243
GBF1
Golgi-specific brefeldin A resistance factor 1
241.54
85.11
0.310
632.98


290404
SLC25A3
Solute carrier family 25 (mitochondrial carrier; phosphate carrier),
1579.85
87.93
0.034
45.05




member 3


290758
DDB1
Damage-specific DNA binding protein 1, 127 kDa
452.78
82.29
0.138
190.14


291587
ARID1B
AT rich interactive domain 1B (SWI1-like)
135.97
82.06
0.310
73.22


292026
EIF4E2
Eukaryotic translation initiation factor 4E member 2
186.78
88.38
0.138
46.59


292063
EIF4B
Hypothetical protein PRO1843
439.43
110.97
0.103
148.75


292078
LARP1
La ribonucleoprotein domain family. member 1
246.82
65.22
0.069
105.37


292265
ZMYND11
Zinc finger, MYND domain containing 11
133.13
109.13
0.207
56.47


292457
SNHG5
Small nucleolar RNA host gene (non-protein coding) 5
400.14
267.50
0.276
289.85


292493
XRCC6
X-ray repair complementing defective repair in Chinese hamster
691.10
100.07
0.034
318.36




cells 6 (Ku autoantigen, 70 kDa)


292524
CCNH
Cyclin H
158.48
96.80
0.276
32.70


292579
PTDSS1
Phosphatidylserine synthase 1
195.76
80.55
0.276
67.07


293563
C1orf108
Chromosome 1 open reading frame 108
144.99
87.81
0.172
65.61


295917
ATP6V1B2
ATPase, H+ transporting. lysosomal 56/58 kDa, VI subunit B,
151.09
76.58
0.207
62.97




isoform 2


297324
TIMP3
TIMP metallopeptidase inhibitor 3 (Sorsby fundus dystrophy.
505.19
227.34
0.310
200.02




pseudoinflammatory)


298198
CMTM3
CKLF-like MARVEL transmembrane domain containing 3
127.34
71.77
0.310
95.15


298280
ATP5A1
ATP synthase, H+ transporting, mitochondrial F1 complex. alpha
1791.25
357.36
0.000
473.59




subunit. isoform 1. cardiac muscle


298654
DUSP6
Dual specificity phosphatase 6
208.26
87.60
0.310
98.88


299002
FBL
Fibrillarin
591.46
179.47
0.138
162.19


299055
GDI2
GDP dissociation inhibitor 2
323.73
77.59
0.069
72.16


300141
RPL39
Ribosomal protein L39
775.36
419.08
0.172
791.80


300684
RCP9
Calcitonin gene-related peptide-receptor component protein
79.62
45.89
0.241
39.78


300772
TPM2
Tropomyosin 2 (beta)
861.72
370.12
0.345
294.55


300816
RAB1B
RAB1B. member RAS oncogene family
228.92
96.00
0.172
175.17


300834
GALNT2
UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-
155.76
89.15
0.241
76.65




acetylgaladosaminyltransferase 2 (GalNAc-T2)


301404
RBM3
RNA binding motif (RNP1, RRM) protein 3
325.81
102.69
0.172
117.20


301412
UFC1
Ubiquitin-fold modifier conjugating enzyme 1
142.19
76.03
0.276
155.60


302742
MRPS6
Mitochondrial ribosomal protein S6
184.15
77.33
0.276
99.50


302903
UBE2I
Ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)
178.40
82.89
0.172
95.85


303676
G3BP2
Ras-GTPase activating protein SH3 domain-binding protein 2
149.92
66.30
0.241
98.85


304192
DSTN
Destrin (actin depolymerizing factor)
223.11
77.62
0.207
79.90


304682
CST3
Cystatin C (amyloid angiopathy and cerebral hemorrhage)
266.47
126.42
0.172
802.25


306123
MAGEF1
Melanoma antigen family F, 1
183.67
83.29
0.379
64.12


306242
RANBP9
RAN binding protein 9
116.92
67.43
0.310
66.12


306329
ZFAND6
Zinc finger, AN1-type domain 6
247.28
99.07
0.276
111.07


306425
IBTK
Inhibitor of Bruton agammaglobulinemia tyrosine kinase
104.18
51.87
0.379
71.02


308122
ITPK1
Inositol 1,3,4-triphosphate 5/6 kinase
254.52
81.30
0.276
53.88


308340
NUP188
Nucleoporin 188 kDa
329.72
144.04
0.241
50.55


308709
PDIA3
Protein disulfide isomerase family A, member 3
204.27
87.48
0.069
175.08


309090
SFRS7
Splicing factor, arginine/serine-rich 7, 35 kDa
189.69
89.49
0.172
104.22


309231
C6orf153
Chromosome 6 open reading frame 153
157.44
80.31
0.310
66.08


309641
RNF11
Ring finger protein 11
162.82
68.82
0.172
187.15


309753
STARD3NL
STARD3 N-terminal like
119.30
74.99
0.310
95.69


309849
C14orf159
Chromosome 14 open reading frame 159
122.74
74.53
0.379
43.93


310542
TOMM40
Translocase of outer mitochondrial membrane 40 homolog (yeast)
267.48
79.87
0.138
50.95


310645
RAB1A
RAB1A. member RAS oncogene family
252.99
84.41
0.241
104.46


311072
MRPS35
Mitochondrial ribosomal protein S35
138.81
64.82
0.345
40.18


311346
CMAS
Cytidine monophosphate N-acetylneuraminic acid synthetase
109.31
97.45
0.345
48.58


311609
DDX39
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
260.02
110.28
0.138
102.82


311640
RPS27A
Ribosomal protein S27a
524.64
119.16
0.034
830.70


312098
ADAM15
ADAM metallopeptidase domain 15 (metargidin)
200.26
132.76
0.345
77.56


313847
TXNDC11
Thioredoxin domain containing 11
106.99
71.40
0.345
35.55


314263
BAZ2A
Bromodomain adjacent to zinc finger domain, 2A
164.92
91.68
0.241
70.15


314359
EIF3S12
Eukaryotic translation initiation factor 3, subunit 12
248.91
116.13
0.103
350.37


315177
IFRD2
Interferon-related developmental regulator 2
180.25
60.11
0.276
58.92


315230
EIF1B
Eukaryotic translation initiation factor 1B
166.77
108.63
0.207
160.77


319334
NASP
Nuclear autoantigenic sperm protein (histone-binding)
320.92
87.44
0.103
131.55


321391
ELOF1
Elongation factor 1 homolog (S. cerevisiae)
119.51
68.26
0.345
60.37


321541
RAB11A
RAB11A, member RAS oncogene family
193.82
99.65
0.172
123.34


323363
ATG9A
ATG9 autophagy related 9 homolog A (S. cerevisiae)
159.62
88.11
0.276
47.64


323489
PTCD3
Pentatricopeptide repeat domain 3
153.29
80.62
0.172
49.53


324250
NDUFB2
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8 kDa
245.74
182.66
0.379
183.95


324844
VKORC1
Vitamin K epoxide reductase complex. subunit 1
151.74
66.24
0.276
138.96


325650
EHD2
EH-domain containing 2
160.03
99.53
0.379
116.94


326387
MORF4L2
Mortality factor 4 like 2
313.02
109.69
0.103
189.57


330384
CORO1C
Coronin. actin binding protein. 1C
171.53
69.53
0.103
118.15


331431
SCC-112
SCC-112 protein
242.38
75.28
0.069
64.31


333388
EEF1D
Eukaryotic translation elongation factor 1 delta (guanine nucleotidtext missing or illegible when filed
899.57
105.63
0.000
404.01




exchange protein)


333579
HSPC152
Hypothetical protein HSPC152
209.20
133.84
0.172
163.96


333786
PSMA2
Proteasome (prosome. macropain) subunit, alpha type. 2
207.24
97.57
0.138
197.41


333823
MRPL13
Mitochondrial ribosomal protein L13
113.33
69.75
0.345
44.81


334017
TUBA1B
Tubulin. alpha 1b
1834.27
95.82
0.000
1202.13


334479
TRAF7
TNF receptor-associated factor 7
242.13
130.36
0.138
56.99


334534
GNS
Glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID)
129.18
72.76
0.276
73.76


334587
RBPMS
RNA binding protein with multiple splicing
136.68
59.93
0.345
76.18


334713
UBL7
Ubiquitin-like 7 (bone marrow stromal cell-derived)
192.75
67.45
0.207
71.93


334851
LASP1
LIM and SH3 protein 1
297.69
80.06
0.034
98.51


334868
PPP2R5E
Protein phosphatase 2, regulatory subunit B (B56), epsilon isoform
111.74
78.51
0.345
40.49


335003
ANKRD11
Ankyrin repeat domain 11
152.63
135.85
0.276
85.85


335057
SEPT2
Septin 2
321.01
90.60
0.069
203.38


335163
LIMCH1
LIM and calponin homology domains 1
217.46
84.47
0.379
58.83


335918
FDPS
Farnesyl diphosphate synthase (farnesyl pyrophosphate
635.55
104.20
0.034
75.25




synthetase. dimethylallyltranstransferase, geranyltranstransferase


337295
STIP1
Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
326.55
78.19
0.172
108.95


337766
TXNRD1
Thioredoxin reductase 1
641.30
103.44
0.034
227.03


339278
COPB1
Coatomer protein complex. subunit beta 1
144.35
59.14
0.241
121.58


339639
COX7A2L
Cytochrome c oxidase subunit VIIa polypeptide 2 like
222.21
84.81
0.241
200.80


339697
GRINA
Glutamate receptor, ionotropic, N-methyl D-asparate-associated
287.06
90.28
0.103
251.13




protein 1 (glutamate binding)


343911
EI24
Etoposide induced 2.4 mRNA
172.38
72.77
0.103
162.16


345694
KCMF1
Potassium channel modulatory factor 1
114.01
57.72
0.345
54.57


346868
EBNA1BP2
EBNA1 binding protein 2
190.81
79.22
0.276
75.67


348418
DR1
Down-regulator of transcription 1. TBP-binding (negative cofactor
109.41
77.62
0.207
45.01


349656
SCARB2
Scavenger receptor class B, member 2
147.31
89.03
0.241
210.49


350194
ZMAT2
Zinc finger. matrin type 2
115.49
53.42
0.207
37.72


350229
CASC3
Cancer susceptibility candidate 3
124.19
53.21
0.241
114.41


350268
IRF2BP2
Interferon regulatory factor 2 binding protein 2
153.03
81.62
0.276
118.60


350364
FAM120AOS
Family with sequence similarity 120A opposite strand
107.30
65.11
0.379
41.56


350927
SLC25A6
Solute carrier family 25 (mitochondrial carrier: adenine nucleotide
952.99
85.55
0.000
444.35




translocator). member 6


351099
FLJ10241
Hypothetical protein FLJ10241
126.93
65.83
0.276
39.55


351296
LOC51035
SAPK substrate protein 1
210.44
71.71
0.172
87.27


351316
TM4SF1
Transmembrane 4 L six family member 1
422.43
110.13
0.276
449.98


351474
PAQR4
Progestin and adipoQ receptor family member IV
212.87
153.70
0.345
84.43


351680

CDNA clone IMAGE: 5302006
133.19
88.88
0.276
120.23


351875
COX6C
Cytochrome c oxidase subunit VIc
304.69
180.70
0.310
559.91


352341
STCH
Stress 70 protein chaperone, microsome-associated. 60 kDa
121.74
86.32
0.379
58.92


352656
GHITM
Growth hormone inducible transmembrane protein
363.92
99.19
0.103
63.14


352768
PSMB1
Proteasome (prosome, macropain) subunit, beta type, 1
292.02
82.24
0.103
177.54


354056
POR
P450 (cytochrome) oxidoreductase
227.09
82.79
0.379
74.23


355141
TNIP1
TNFAIP3 interacting protein 1
269.81
97.79
0.241
102.36


355606
TMEM167
Transmembrane protein 167
211.08
149.60
0.276
80.22


355643
RNPS1
RNA binding protein S1, serine-rich domain
423.42
65.75
0.103
105.94


355708
TMEM127
Transmembrane protein 127
77.31
49.24
0.379
45.95


355750
JOSD3
Josephin domain containing 3
117.50
61.17
0.379
147.10


355753
AGPAT6
1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic
150.13
73.56
0.345
47.02




acid acyltransferase. zeta)


355867
MARS
Methionine-tRNA synthetase
323.10
233.26
0.069
59.52


355927
VDAC2
Voltage-dependent anion channel 2
242.40
82.56
0.103
141.28


355934
SFPQ
Splicing factor proline/glutamine-rich (polypyrimidine tract binding
269.46
133.96
0.138
128.50




protein associated)


355983
BZW1
Basic leucine zipper and W2 domains 1
338.32
108.39
0.103
181.32


356061
MAP1LC3B
Microtubule-associated protein 1 light chain 3 beta
126.69
74.25
0.207
166.48


356096
MAP7D1
MAP7 domain containing 1
191.33
92.49
0.207
152.55


356190
UBB
Ubiquitin B
742.69
74.99
0.000
716.73


356270
SDHD
Succinate dehydrogenase complex, subunit D, integral membrane
977.72
187.08
0.207
47.58




protein


356285
HMGN1
High-mobility group nucleosome binding domain 1
279.36
80.39
0.138
330.79


356331
PPIA
Peptidylprolyl isomerase A (cyclophilin A)
1225.70
78.02
0.034
1646.83


356366
RPS2
Ribosomal protein S2
5031.59
91.00
0.000
1894.42


356371
RPL28
Ribosomal protein L28
622.10
176.27
0.034
2001.52


356377
RNF187
Ring finger protein 187
188.84
96.73
0.207
92.73


356467
C19orf42
Chromosome 19 open reading frame 42
148.32
80.69
0.034
76.36


356501
PHF6
PHD finger protein 6
145.65
87.04
0.310
160.28


356502
RPLP1
Ribosomal protein, large, P1
881.03
208.46
0.000
2388.08


356549
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide 18 kDa
153.63
84.17
0.276
81.89


356630
NUTF2
Nuclear transport factor 2
144.29
83.13
0.103
186.27


356647
SNX6
Sorting nexin 6
134.10
84.57
0.310
94.88


356654
PSMC1
Proteasome (prosome, macropain) 26S subunit, ATPase, 1
154.97
82.94
0.172
80.59


356766
C20orf199
Chromosome 20 open reading frame 199
227.51
154.61
0.310
203.56


356769
MAN2B1
Mannosidase, alpha, class 2B. member 1
166.87
97.57
0.310
102.94


356799
RPL41
Ribosomal protein L41
336.21
165.15
0.345
350.34


357901
SOX4
SRY (sex determining region Y)-box 4
163.64
90.74
0.345
273.44


362728
SEP15
15 kDa selenoprotein
302.87
139.54
0.138
110.63


365116
U2AF1
U2(RNU2) small nuclear RNA auxiliary factor 1
152.30
63.70
0.241
103.78


368084
LRPPRC
Leucine-rich PPR-motif containing
180.31
95.65
0.241
70.90


368149
CCT7
Chaperonin containing TCP1. subunit 7 (eta)
968.98
94.04
0.069
253.53


368157
PYGB
Phosphorylase. glycogen; brain
289.40
94.26
0.241
262.01


368240
DYRK1A
Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
132.39
93.19
0.379
80.76


368264
PPP2R5C
Protein phosphatase 2. regulatory subunit B (B56), gamma
235.30
135.72
0.103
78.57


368376
SRPR
Signal recognition particle receptor (‘docking protein’)
170.10
91.17
0.138
64.69


368402
C8orf55
Chromosome 8 open reading frame 55
129.24
75.63
0.379
50.69


368404
EXT2
Exostoses (multiple) 2
144.25
80.41
0.345
64.81


368525
PDLIM1
PDZ and LIM domain 1 (elfin)
285.39
113.52
0.241
94.01


368598
ZC3H15
Zinc finger CCCH-type containing 15
153.03
73.26
0.172
63.93


368934
C17orf45
Chromosome 17 open reading frame 45
538.27
122.37
0.103
510.24


368985
TRIP12
Thyroid hormone receptor interactor 12
160.59
66.50
0.345
74.13


369017
RAB2A
RAB2A, member RAS oncogene family
185.09
87.27
0.172
120.37


369052
SELT
Selenoprotein T
368.37
150.53
0.172
114.17


369068
DYNC1LI2
Dynein, cytoplasmic 1, light intermediate chain 2
158.56
97.53
0.138
167.20


369125
PSMD14
Proteasome (prosome, macropain) 26S subunit, non-ATPase. 14
166.50
83.15
0.103
74.34


369285
INTS7
Integrator complex subunit 7
112.06
98.19
0.379
266.65


369356
MLL5
Myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog,
156.73
73.07
0.276
76.27





Drosophila)



369606
CPSF6
Cleavage and polyadenylation specific factor 6, 68 kDa
132.90
65.76
0.207
63.91


369607
GAK
Cyclin G associated kinase
139.66
91.16
0.379
72.66


369614
COPS2
COP9 constitutive photomorphogenic homolog subunit 2
138.58
64.46
0.241
36.98




(Arabidopsis)


369615
SLC25A38
Solute carrier family 25. member 38
148.69
73.93
0.345
43.41


369761
DAZAP2
DAZ associated protein 2
432.10
77.51
0.069
187.75


369785
C19orf50
Chromosome 19 open reading frame 50
176.53
91.76
0.207
85.83


369920
RAP1B
RAP1B. member of RAS oncogene family
160.45
86.70
0.138
172.27


370024
SEC31A
SEC31 homolog A (S. cerevisiae)
162.54
73.78
0.138
159.51


370247
APLP2
Amyloid beta (A4) precursor-like protein 2
331.96
98.29
0.207
295.17


370292
BCCIP
BRCA2 and CDKN1A interacting protein
116.14
69.62
0.172
54.66


370312
FNTA
Farnesyltransferase, CAAX box, alpha
113.75
73.97
0.172
56.14


370408
COMT
Catechol-O-methyltransferase
269.48
182.45
0.138
81.80


370581
CAP1
CAP. adenylate cyclase-associated protein 1 (yeast)
429.82
79.15
0.069
202.38


370770
XPO1
Exportin 1 (CRM1 homolog, yeast)
218.71
75.18
0.172
86.09


370771
CDKN1A
Cyclin-dependent kinase inhibitor 1A (p21, Cip1)
406.91
129.23
0.207
221.01


370895
RPN2
Ribophorin II
431.77
115.24
0.069
151.28


370927
LRRC59
Leucine rich repeat containing 59
338.69
149.06
0.138
68.76


370937
TAPBP
TAP binding protein (tapasin)
159.24
70.81
0.310
115.35


371001
EIF3S9
Eukaryotic translation initiation factor 3, subunit 9 eta, 116 kDa
343.76
63.64
0.103
193.59


371416
CARM1
Coactivator-associated arginine methyltransferase 1
186.54
108.72
0.276
44.92


371563
RAB14
RAB14. member RAS oncogene family
154.08
65.54
0.310
90.16


371788
C1orf77
Chromosome 1 open reading frame 77
121.36
60.36
0.207
40.80


371889
ATP1A1
Hypothetical protein MGC16179
910.43
156.53
0.069
245.88


372003
FAM120A
Family with sequence similarity 120A
211.67
121.79
0.241
130.10


372050
YIPF5
Yip1 domain family, member 5
117.56
66.39
0.276
58.15


372286
CUL3
Cullin 3
131.34
66.77
0.207
55.91


372331
SPTAN1
Spectrin, alpha. non-erythrocytic 1 (alpha-fodrin)
187.03
76.74
0.207
141.12


372541
KBTBD2
Kelch repeat and BTB (POZ) domain containing 2
100.18
63.32
0.310
72.26


372616
ARL1
ADP-ribosylation factor-like 1
107.60
50.60
0.345
53.90


372914
NDRG1
N-myc downstream regulated gene 1
214.33
101.47
0.241
84.08


373550
TGIF1
TGFB-induced factor homeobox 1
109.97
67.30
0.379
133.12


373741
HM13
Histocompatibility (minor) 13
280.09
120.85
0.069
144.47


373763
HNRPR
Heterogeneous nuclear ribonucleoprotein R
210.83
74.59
0.103
190.45


373952
CAMTA2
Calmodulin binding transcription activator 2
181.38
88.37
0.345
50.38


373959
VGLL4
Vestigial like 4 (Drosophila)
141.11
70.42
0.310
71.58


374043
ASXL1
Additional sex combs like 1 (Drosophila)
130.97
88.31
0.241
116.01


374257
LOC28616
Hypothetical protein LOC286167
151.79
112.19
0.276
73.50


374378
CKS1B
CDC28 protein kinase regulatory subunit 1B
179.04
67.28
0.172
113.85


374477
EWSR1
Ewing sarcoma breakpoint region 1
423.33
116.42
0.069
133.82


374503
MORF4L1
Mortality factor 4 like 1
292.45
60.67
0.069
303.22


374588
RPL17
Ribosomal protein L17
907.22
138.52
0.034
1232.67


374596
TPT1
Tumor protein. translationally-controlled 1
987.59
77.14
0.034
3569.27


374650
IFITM3
Interferon induced transmembrane protein 3 (1-8U)
366.99
97.80
0.276
406.62


374973
PRPF4
PRP4 pre-mRNA processing factor 4 homolog (yeast)
103.66
65.33
0.207
44.01


375001
TLN1
Talin 1
392.09
120.61
0.138
109.38


375108
CD24
CD24 antigen (small cell lung carcinoma cluster 4 antigen)
239.14
95.21
0.310
518.62


375217
RNF31
Ring finger protein 31
104.06
73.05
0.379
50.53


376046
BTN3A2
Butyrophilin, subfamily 3. member A2
149.93
123.05
0.310
52.79


376933
GUK1
Guanylate kinase 1
401.68
92.59
0.276
308.91


377155
MTDH
Metadherin
214.89
91.52
0.138
132.35


378103
RPS5
Ribosomal protein S5
1006.11
134.01
0.069
568.97


378532
HBS1L
HBS1-like (S. cerevisiae)
131.17
80.02
0.241
36.24


378808
EIF2A
Eukaryotic translation initiation factor 2A. 65 kDa
197.55
75.77
0.138
71.81


380403
BMI1
BMI1 polycomb ring finger oncogene
103.02
59.56
0.276
49.37


380774
DDX3X
DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
183.86
64.56
0.241
292.30


380953
RPL38
Ribosomal protein L38
472.88
260.03
0.138
1234.08


380973
SUMO2
SMT3 suppressor of mif two 3 homolog 2 (yeast)
634.74
241.40
0.103
516.19


381008
HLA-E
Major histocompatibility complex, class I. E
476.57
108.00
0.103
189.44


381058
KIAA0146
KIAA0146 protein
136.13
82.82
0.276
58.75


381072
PPIF
Peptidylprolyl isomerase F (cyclophilin F)
236.14
96.10
0.034
101.71


381123
RPL21
Ribosomal protein L21
1087.11
152.34
0.069
2223.30


381126
RPS14
Ribosomal protein S14
312.13
120.35
0.172
890.77


381189
CBX3
Chromobox homolog 3 (HP1 gamma homolog. Drosophila)
352.70
90.90
0.138
202.41


381219
RPL15
Ribosomal protein L15
454.76
118.60
0.034
690.41


381256
GLTP
Glycolipid transfer protein
107.14
53.95
0.379
107.25


382044
MRPS2
Mitochondrial ribosomal protein S2
171.06
80.19
0.207
63.91


382168
NCOA3
Nuclear receptor coactivator 3
166.37
135.20
0.345
47.57


385913
ANP32E
Acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
183.06
71.26
0.345
98.67


385986
UBE2B
Ubiquitin-conjugating enzyme E2B (RAD6 homolog)
135.72
71.52
0.345
133.50


386434
ANXA7
Annexin A7
173.87
70.85
0.138
79.18


386465
CHERP
Calcium homeostasis endoplasmic reticulum protein
177.08
80.21
0.345
43.91


386939
USP7
Ubiquitin specific peptidase 7 (herpes virus-associated)
181.20
217.36
0.207
49.17


387208
FAU
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV)
336.62
163.47
0.103
653.75




ubiquitously expressed (fox derived); ribosomal protein S30


387804
PABPC1
Poly(A) binding protein, cytoplasmic 1
625.68
87.04
0.000
382.83


388034
RXRB
Retinoid X receptor. beta
142.87
89.88
0.310
38.31


388654
ATP6V1G1
ATPase, H+ transporting, lysosomal 13 kDa, V1 subunit G isofortext missing or illegible when filed
234.65
112.64
0.172
97.60




1


388664
RPL11
Ribosomal protein L11
672.13
137.34
0.034
1553.26


388739
XRCC5
X-ray repair complementing defective repair in Chinese hamster
346.39
73.79
0.034
162.11




cells 5 (double-strand-break rejoining; Ku autoantigen, 80 kDa)


388927
YY1
YY1 transcription factor
136.53
65.73
0.103
127.70


388956
C19orf22
Chromosome 19 open reading frame 22
133.57
84.00
0.345
55.36


389037
MCM3APAS
MCM3 minichromosome maintenance deficient 3 (S. cerevisiae)
152.46
115.81
0.207
70.85




associated protein


389107
ATP6V0C
ATPase, H+ transporting. lysosomal 16 kDa, V0 subunit c
237.34
79.84
0.172
238.25


389171
PINK1
PTEN induced putative kinase 1
126.44
98.97
0.207
74.04


389649
EIF4A3
Eukaryotic translation initiation factor 4A. isoform 3
193.85
75.13
0.138
88.57


389734
TCEAL8
Transcription elongation factor A (SII)-like 8
155.08
72.63
0.345
43.98


389996
CHCHD2
Coiled-coil-helix-coiled-coil-helix domain containing 2
373.11
68.47
0.034
337.24


390667
GSTK1
Glutathione S-transferase kappa 1
168.35
104.34
0.241
152.19


393201
ACTR2
ARP2 actin-related protein 2 homolog (yeast)
328.49
139.01
0.172
119.86


395482
PTK2
PTK2 protein tyrosine kinase 2
177.88
103.98
0.207
42.01


396644
PAIP2
Poly(A) binding protein interacting protein 2
198.13
69.25
0.103
96.51


396740
NIP30
NEFA-interacting nuclear protein NIP30
96.64
53.08
0.241
47.28


396783
SLC9A3R1
Solute carrier family 9 (sodium/hydrogen exchanger). member 3
165.70
98.11
0.276
107.54




regulator 1


397609
RPS16
Ribosomal protein S16
1470.38
224.21
0.069
1068.13


399800
AKAP8L
A kinase (PRKA) anchor protein 8-like
166.62
90.19
0.310
63.09


400295
RPL30
Ribosomal protein L30
473.07
139.61
0.103
2027.75


401509
RBM10
RNA binding motif protein 10
170.05
75.56
0.172
69.36


401903
COX5A
Cytochrome c oxidase subunit Va
149.97
93.76
0.379
296.35


401929
RPL10
Ribosomal protein L10
1521.64
147.31
0.000
2240.90


403917
STK24
Serine/threonine kinase 24 (STE20 homolog. yeast)
150.48
84.52
0.276
83.03


404056
EIF3S1
Eukaryotic translation initiation factor 3. subunit 1 alpha. 35 kDa
140.93
90.80
0.310
62.42


404321
GARS
Glycyl-tRNA synthetase
247.29
80.31
0.034
166.21


405144
SFRS3
Splicing factor, arginine/serine-rich 3
526.80
137.87
0.034
293.88


405410
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-
153.55
55.45
0.379
87.05




acetylglucosamine: polypeptide-N-acetylglucosaminyl transferase)


405514
KIAA1267
KIAA1267
114.08
65.11
0.345
72.89


405590
EIF3S6
Eukaryotic translation initiation factor 3. subunit 6 48 kDa
654.44
113.72
0.069
174.41


405880
MRPS21
Mitochondrial ribosomal protein S21
141.88
82.93
0.276
145.69


405942
CCDC137
Coiled-coil domain containing 137
133.03
86.11
0.241
77.12


406062
NDUFA11
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11. 14.7
173.17
93.80
0.345
194.39




kDa


406068
UBE2M
Ubiquitin-conjugating enzyme E2M (UBC12 homolog, yeast)
132.46
80.88
0.345
94.66


406096
ZFAND5
Zinc finger. AN1-type domain 5
192.43
93.38
0.345
318.23


406277
SF3A1
Splicing factor 3a, subunit 1, 120 kDa
296.74
89.39
0.276
83.36


406300
RPL23
Ribosomal protein L23
696.30
308.79
0.069
1844.46


406423
SF3B2
Splicing factor 3b, subunit 2, 145 kDa
355.96
73.17
0.069
58.42


406510
ATP5B
ATP synthase, H+ transporting, mitochondrial F1 complex, beta
1002.07
88.90
0.034
206.51




polypeptide


406520
LOC38954
Similar to CG14977-PA
124.27
87.28
0.276
188.85


406534
HMG20B
High-mobility group 20B
281.92
155.98
0.103
66.80


406590
MRFAP1
Mof4 family associated protein 1
256.02
73.95
0.207
195.87


406620
RPS10
Ribosomal protein S10
1185.80
153.87
0.034
437.99


406683
RPS15
Ribosomal protein S15
521.25
123.23
0.069
137.98


406799
RAB18
RAB18. member RAS oncogene family
127.87
57.58
0.310
50.22


406840
SLC35A4
Solute carrier family 35. member A4
186.45
71.30
0.103
42.86


407368
LSM14A
LSM14A, SCD6 homolog A (S. cerevisiae)
151.28
68.77
0.207
296.81


407580
PKP4
Plakophilin 4
130.61
101.53
0.207
111.02


407995
MIF
Macrophage migration inhibitory factor (glycosylation-inhibiting
520.62
161.06
0.241
820.62




factor)


408018
RPL36
Ribosomal protein L36
426.58
200.20
0.276
1665.77


408073
RPS6
Ribosomal protein S6
1753.93
92.01
0.034
1215.89


408236
TXNL5
Thioredoxin-like 5
137.51
78.57
0.276
189.91


408257
NDUFS6
NADH dehydrogenase (ubiquinone) Fe—S protein 6, 13 kDa
167.98
115.41
0.379
166.96




(NADH-coenzyme Q reductase)


408293
CEP170
Centrosomal protein 170 kDa
95.55
57.63
0.379
56.47


408324
FLJ10769
Hypothetical protein FLJ10769
179.63
110.86
0.345
54.49


408428
FOXN3
Forkhead box N3
171.98
93.85
0.379
87.86


408581
SVIL
Supervillin
150.79
78.33
0.276
98.78


408909
GOLPH3
Golgi phosphoprotein 3 (coat-protein)
149.55
90.99
0.207
103.46


409140
ATP5O
ATP synthase, H+ transporting, mitochondrial F1 complex, O
238.76
77.50
0.138
187.51




subunit (oligomycin sensitivity conferring protein)


409223
SSR4
Signal sequence receptor, delta (translocon-associated protein
187.19
88.00
0.138
154.53




delta)


409230
AGPAT1
1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic
188.83
78.43
0.207
71.39




acid acyltransferase, alpha)


409834
PHPT1
Phosphohistidine phosphatase 1
129.72
80.15
0.379
132.98


410197
IDH3G
Isocitrate dehydrogenase 3 (NAD+) gamma
142.89
74.63
0.276
43.88


410596
WDR68
WD repeat domain 68
190.39
78.19
0.069
37.03


410817
RPL13
Ribosomal protein L13
1259.59
96.20
0.034
2237.07


411480
AUP1
Ancient ubiquitous protein 1
197.34
72.07
0.103
130.09


411641
EIF4EBP1
Eukaryotic translation initiation factor 4E binding protein 1
185.54
87.93
0.310
96.89


411847
MAPK6
Mitogen-activated protein kinase 6
143.89
100.65
0.207
67.09


412103
EFHA1
EF-hand domain family. member A1
130.69
68.19
0.276
74.51


412117
ANXA6
Annexin A6
173.96
90.66
0.172
81.81


412196
IFT57
Intraflagellar transport 57 homolog (Chlamydomonas)
109.98
56.91
0.379
49.42


412433
AIP
Aryl hydrocarbon receptor interacting protein
157.20
76.87
0.207
95.68


412468
KLHDC3
Kelch domain containing 3
366.49
77.49
0.172
60.90


412842
CDC123
Cell division cycle 123 homolog (S. cerevisiae)
155.00
62.20
0.207
68.47


413036
WBSCR22
Williams Beuren syndrome chromosome region 22
181.29
60.06
0.103
73.81


413482
C21orf33
Chromosome 21 open reading frame 33
220.73
103.88
0.172
72.11


414579
SCOTIN
Scotin
344.80
79.60
0.138
89.15


415342
TCF25
Transcription factor 25 (basic helix-loop-helix)
132.99
67.57
0.172
122.55


416049
TNPO2
Transportin 2 (importin 3, karyopherin beta 2b)
121.80
74.72
0.345
77.32


416436
TRIM50
Tripartite motif-containing 50
253.97
118.36
0.138
85.38


417004
S100A11
S100 calcium binding protein A11 (calgizzarin)
282.02
146.47
0.138
317.66


417029
C17orf81
Chromosome 17 open reading frame 81
116.93
60.21
0.379
84.10


418123
CTSLL3
Cathepsin L-like 3
196.99
151.69
0.345
94.78


418175
VPS28
Vacuolar protein sorting 28 (yeast)
137.80
101.08
0.345
126.20


418233
MRPL24
Mitochondrial ribosomal protein L24
111.66
117.93
0.345
91.94


418450
MRPL11
Mitochondrial ribosomal protein L11
169.41
63.02
0.310
53.11


418533
BUB3
BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast)
180.32
113.91
0.172
73.29


418668
ATP5D
ATP synthase, H+ transporting. mitochondrial F1 complex. delta
142.90
94.88
0.276
249.44




subunit


419640
PARK7
Parkinson disease (autosomal recessive, early onset) 7
255.09
75.95
0.172
80.33


420269
COL6A2
Collagen. type VI. alpha 2
425.15
132.41
0.379
327.11


420272
H2AFY
H2A histone family. member Y
236.54
78.85
0.069
156.87


421257
RPL7
Ribosomal protein L7
148.01
111.08
0.138
773.71


421509
CCT4
Chaperonin containing TCP1, subunit 4 (delta)
245.54
69.17
0.138
100.96


422113
ZNF511
Zinc finger protein 511
92.03
40.84
0.379
56.61


423935
RDBP
RD RNA binding protein
114.07
56.49
0.241
90.04


423968
FIS1
Fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)
140.14
94.84
0.379
184.40


424126
SERF2
Small EDRK-rich factor 2
421.90
169.35
0.103
442.70


424908
LSM5
LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
118.18
94.48
0.310
84.59


425777
UBE2L6
Ubiquitin-conjugating enzyme E2L 6
176.08
83.76
0.345
95.06


426296
C10orf104
Chromosome 10 open reading frame 104
193.46
94.72
0.207
104.09


426359
PRR13
proline rich 13
204.04
77.90
0.345
127.55


429052
ITGB1
Integrin. beta 1 (fibronectin receptor. beta polypeptide. antigen
343.25
71.08
0.207
216.47




CD29 includes MDF2. MSK12)


429353
SEPN1
Selenoprotein N, 1
163.54
91.46
0.241
102.88


429581
RTN4
Reticulon 4
587.74
263.68
0.069
320.92


429819
PITPNA
Phosphatidylinositol transfer protein, alpha
132.54
66.33
0.241
119.10


429839
BTF3L4
Basic transcription factor 3-like 4
128.62
88.13
0.379
63.92


430425
GNB1
Guanine nucleotide binding protein (G protein). beta polypeptide 1
348.68
72.19
0.069
129.12


430551
IQGAP1
IQ motif containing GTPase activating protein 1
168.69
68.30
0.241
88.02


430606
CS
Citrate synthase
377.31
109.46
0.034
147.21


430657
ARF5
ADP-ribosylation factor 5
184.36
99.34
0.310
83.08


430733
CLNS1A
Chloride channel. nucleotide-sensitive. 1A
147.58
71.03
0.207
62.07


431101
GNG12
Guanine nucleotide binding protein (G protein). gamma 12
197.95
72.99
0.310
108.86


431367
VTA1
Vps20-associated 1 homolog (S. cerevisiae)
154.26
81.47
0.172
43.97


431498
FOXP1
Forkhead box P1
158.95
84.08
0.345
98.20


431550
MAP4K4
Mitogen-activated protein kinase kinase kinase kinase 4
150.49
75.85
0.241
138.08


431668
COX6B1
Cytochrome c oxidase subunit Vib polypeptide 1 (ubiquitous)
249.30
171.30
0.207
425.55


431850
MAPK1
Mitogen-activated protein kinase 1
147.43
68.90
0.241
66.06


431861
PPP5C
Protein phosphatase 5, catalytic subunit
203.35
97.62
0.138
99.20


431926
NFKB1
Nuclear factor of kappa light polypeptide gene enhancer in B-cells
118.70
65.79
0.310
59.70




1 (p105)


432121
PRDX2
Peroxiredoxin 2
328.05
98.46
0.069
287.03


432438
EML4
Echinoderm microtubule associated protein like 4
127.17
67.00
0.345
67.18


432491
ESD
Esterase D/formylglutathione hydrolase
181.49
81.57
0.103
68.19


432690
SLC39A9
Solute carrier family 39 (zinc transporter), member 9
123.27
74.29
0.207
62.18


432760
CAPZB
Capping protein (actin filament) muscle Z-line. beta
189.76
70.34
0.069
950.43


432898
RPL4
Mitogen-activated protein kinase kinase kinase 13
2173.97
96.68
0.000
1111.01


432976
NR1H2
Nuclear receptor subfamily 1, group H. member 2
190.02
112.04
0.241
79.20


433154
PLSCR3
Phospholipid scramblase 3
118.46
78.13
0.345
42.73


433201
CDK2AP1
CDK2-associated protein 1
137.33
80.77
0.241
153.26


433222
NPC2
Niemann-Pick disease, type C2
218.82
98.64
0.069
149.92


433291
ARD1A
ARD1 homolog A, N-acetyltransferase (S. cerevisiae)
119.07
75.05
0.207
64.82


433307
BCKDHA
Branched chain keto acid dehydrogenase E1, alpha polypeptide
166.35
84.74
0.379
89.54




(maple syrup urine disease)


433343
SRRM2
Serine/arginine repetitive matrix 2
179.81
99.94
0.103
178.03


433345

Full-length cDNA clone CL0BB014ZH04 of Neuroblastoma of
131.69
72.43
0.241
109.07





Homo sapiens (human)



433419
COX4I1
Cytochrome c oxidase subunit IV isoform 1
291.96
97.81
0.103
402.93


433512
ACTR3
ARP3 actin-related protein 3 homolog (yeast)
202.84
72.82
0.103
95.46


433529
RPS11
Ribosomal protein S11
659.56
130.65
0.069
457.96


433540
DNAJC8
DnaJ (Hsp40) homolog, subfamily C. member 8
164.57
66.59
0.172
102.38


433573
C11orf68
Chromosome 11 open reading frame 68
109.74
74.58
0.379
76.09


433615
TUBB2C
Tubulin. beta 2C
1313.99
109.59
0.034
501.20


433701
RPL37A
Ribosomal protein L37a
941.22
280.38
0.034
2360.84


433722
KIAA1967
KIAA1967
137.26
57.51
0.345
37.39


433732
CLK1
CDC-like kinase 1
179.68
71.24
0.379
66.75


433750
EIF4G1
Eukaryotic translation initiation factor 4 gamma. 1
509.92
79.20
0.138
129.41


433759
BANF1
Barrier to autointegration factor 1
185.36
115.51
0.103
199.75


433795
SHC1
SHC (Src homology 2 domain containing) transforming protein 1
307.01
110.48
0.103
93.40


433863
PEBP1
Phosphatidylethanolamine binding protein 1
349.44
89.20
0.034
565.16


433901
COX8A
Cytochrome c oxidase subunit 8A (ubiquitous)
335.34
202.06
0.207
527.55


433951
GPX4
Glutathione peroxidase 4 (phospholipid hydroperoxidase)
265.60
84.94
0.207
646.53


434102
HMGB1
High-mobility group box 1
638.86
104.01
0.000
439.56


434207
HARS2
Histidyl-tRNA synthetase 2
146.76
94.43
0.276
50.79


434219
ANKHD1
Ankyrin repeat and KH domain containing 1
190.31
76.42
0.103
265.78


434401
ZNF638
Zinc finger protein 638
127.61
80.05
0.276
97.81


434937
PPIB
Peptidylprolyl isomerase B (cyclophilin B)
258.12
78.54
0.069
426.54


434953
HMGB2
High-mobility group box 2
275.63
95.40
0.138
90.55


434980
APP
Amyloid beta (A4) precursor protein (peptidase nexin-II. Alzheimetext missing or illegible when filed
228.56
92.10
0.172
645.54




disease)


435044
TBC1D22A
TBC1 domain family, member 22A
160.02
137.97
0.310
159.88


435064
DENND1A
DENN/MADD domain containing 1A
99.58
55.26
0.379
37.16


435120
KIF1C
Kinesin family member 1C
210.09
68.46
0.241
114.26


435136
TXN
Thioredoxin
346.61
189.66
0.276
221.38


435166
LBR
Lamin B receptor
188.22
185.85
0.310
68.73


435231
ZFR
Zinc finger RNA binding protein
158.35
73.83
0.172
48.65


435255
UBXD1
UBX domain containing 1
173.66
118.04
0.241
59.99


435326
ACTL6A
Actin-like 6A
152.42
64.63
0.172
41.79


435512
PPP3CA
Protein phosphatase 3 (formerly 2B), catalytic subunit, alpha
156.63
85.19
0.345
114.98




isoform (calcineurin A alpha)


435535
ZNF395
Zinc finger protein 395
126.06
79.86
0.310
50.14


435610
WAC
WW domain containing adaptor with coiled-coil
197.21
111.45
0.172
100.47


435741
GCSH
IQ motif and WD repeats 1
165.11
72.41
0.138
121.99


435759
THAP4
THAP domain containing 4
133.58
83.98
0.379
45.48


435771
API5
Apoptosis inhibitor 5
191.29
106.97
0.276
59.57


435841
TNRC15
Trinucleotide repeat containing 15
115.02
60.28
0.310
37.44


435850
LYPLA1
Lysophospholipase I
278.94
98.93
0.138
132.98


435933
PHF10
Chromosome 6 open reading frame 120
160.27
71.75
0.276
72.80


435948
ATAD1
ATPase family, AAA domain containing 1
119.77
79.07
0.310
46.76


435952
CDK5RAP1
CDK5 regulatory subunit associated protein 1
122.11
83.77
0.310
40.84


435974
MTHFD1
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1,
193.28
103.81
0.172
55.52




methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate




synthetase


436035
TUBA1C
Tubulin, alpha 1c
3419.68
98.12
0.000
275.68


436093
BAT2
HLA-B associated transcript 2
414.35
96.65
0.172
98.56


436204
ZNF289
Zinc finger protein 289, ID1 regulated
187.48
70.10
0.138
33.87


436298
EMP1
Epithelial membrane protein 1
139.81
90.61
0.310
164.61


436405
IDH3B
Isocitrate dehydrogenase 3 (NAD+) beta
233.17
64.64
0.172
72.68


436437
ALDH2
Aldehyde dehydrogenase 2 family (mitochondrial)
213.99
91.66
0.207
112.73


436446
ARMET
Arginine-rich, mutated in early stage tumors
238.76
107.79
0.379
112.15


436500
DBNL
Drebrin-like
322.18
106.61
0.241
68.08


436568
CD74
CD74 antigen (invariant polypeptide of major histocompatibility
3672.46
211.82
0.345
1315.63




complex, class II antigen-associated)


436578
POLR2F
Polymerase (RNA) II (DNA directed) polypeptide F
106.90
73.50
0.345
88.14


436657
CLU
Clusterin (complement lysis inhibitor. SP-40, 40, sulfated
586.91
158.76
0.241
1709.53




glycoprotein 2, testosterone-repressed prostate message 2,




apolipoprotein J)


436687
SET
SET translocation (myeloid leukemia-associated)
285.02
84.84
0.034
483.49


436803
VBP1
Von Hippel-Lindau binding protein 1
182.84
93.52
0.207
77.53


437056
SUPT5H
Suppressor of Ty 5 homolog (S. cerevisiae)
216.64
117.71
0.207
47.97


437060
CYCS
Cytochrome c, somatic
1874.90
252.41
0.207
102.41


437110
ANXA2
Annexin A2
2060.10
130.61
0.034
483.00


437178
ACADVL
Acyl-Coenzyme A dehydrogenase, very long chain
288.37
92.69
0.069
176.48


437256
GRINL1A
Glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A
151.07
83.14
0.345
42.69


437277
MGAT4B
Mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-
1083.50
147.46
0.103
98.94




acetylglucosaminyltransferase, isoenzyme B


437367
GBAS
Glioblastoma amplified sequence
143.22
113.71
0.276
128.35


437388
PIGT
Phosphatidylinositol glycan, class T
227.91
106.45
0.103
55.36


437403
PPA1
Pyrophosphatase (inorganic) 1
159.06
72.02
0.138
83.72


437594
RPLP2
Ribosomal protein, large, P2
498.18
148.73
0.034
2903.18


437638
XBP1
X-box binding protein 1
319.21
100.78
0.069
381.08


437779
C11orf10
Chromosome 11 open reading frame 10
241.39
149.44
0.345
178.08


437831
C14orf32
Chromosome 14 open reading frame 32
175.37
74.13
0.241
47.62


438072
UNC84A
Unc-84 homolog A (C. elegans)
146.52
82.20
0.345
53.45


438219
GPS2
G protein pathway suppressor 2
172.78
109.64
0.172
71.49


438429
RPS19
Ribosomal protein S19
721.53
169.75
0.103
3026.84


438678
TALDO1
Transaldolase 1
280.29
75.06
0.138
109.07


438720
MCM7
MCM7 minichromosome maintenance deficient 7 (S. cerevisiae)
548.49
107.89
0.138
192.09


438970
TBL1XR1
Transducin (beta)-like 1X-linked receptor 1
185.70
86.87
0.241
73.49


438974
CUTL1
Cut-like 1. CCAAT displacement protein (Drosophila)
159.65
95.91
0.310
59.88


439480
RBM5
RNA binding motif protein 5
145.24
117.34
0.379
56.89


439481
SUPT4H1
Suppressor of Ty 4 homolog 1 (S. cerevisiae)
139.55
62.12
0.207
121.04


439548
FAM96A
Family with sequence similarity 96. member A
155.35
85.81
0.241
32.78


439552
MAP2K3
Mitogen-activated protein kinase kinase 3
2617.77
147.47
0.000
97.32


439815
HBXIP
Hepatitis B virus x interacting protein
127.08
97.39
0.310
188.94


440382
TRIM27
Tripartite motif-containing 27
155.33
68.54
0.172
80.66


440544
CLIC4
Chloride intracellular channel 4
337.71
121.54
0.103
116.71


440599
DDX1
DEAD (Asp-Glu-Ala-Asp) box polypeptide 1
433.83
283.30
0.103
194.20


440604
PSMD7
Proteasome (prosome. macropain) 26S subunit, non-ATPase, 7
156.07
77.17
0.138
99.15




(Mov34 homolog)


440899
TTYH3
Tweety homolog 3 (Drosophila)
229.54
97.64
0.172
81.97


440932
SEPT9
Septin 9
361.78
96.86
0.034
158.17


440960
RAD23A
RAD23 homolog A (S. cerevisiae)
214.38
69.61
0.207
56.98


440961
CAST
Calpastatin
194.31
90.01
0.207
86.43


441072
POLR2L
Polymerase (RNA) II (DNA directed) polypeptide L, 7.6 kDa
225.44
138.68
0.379
278.78


441550
ABHD12
Abhydrolase domain containing 12
215.47
106.70
0.241
69.22


442344
IRS2
Insulin receptor substrate 2
134.97
79.52
0.379
117.65


442798
RNF10
Ring finger protein 10
210.73
75.43
0.103
80.34


443134
GBA2
Glucosidase. beta (bile acid) 2
132.85
60.27
0.379
64.55


443379
PSMD11
Proteasome (prosome, macropain) 26S subunit. non-ATPase. 11
180.98
64.45
0.172
49.98


443837
NPEPPS
Aminopeptidase puromycin sensitive
173.54
73.65
0.172
51.38


443914
SOD1
Superoxide dismutase 1. soluble (amyotrophic lateral sclerosis 1
341.06
88.95
0.103
267.67




(adult))


444279
GPBP1
GC-rich promoter binding protein 1
132.98
56.92
0.241
63.11


444356
GRB2
Growth factor receptor-bound protein 2
167.92
61.94
0.172
146.51


444468
CTDSP1
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A
187.59
76.37
0.241
92.85




small phosphatase 1


444472
SDHC
Succinate dehydrogenase complex. subunit C. integral membrane
175.42
71.22
0.207
45.51




protein, 15 kDa


444569
TMEM49
Transmembrane protein 49
212.58
83.31
0.241
197.09


444673
CLPTM1L
CLPTM1-like
229.08
106.76
0.207
91.56


444724
AZI2
5-azacytidine induced 2
132.28
73.71
0.345
44.74


444818
CGGBP1
CGG triplet repeat binding protein 1
177.53
83.72
0.241
66.90


444931
CRSP6
Cofactor required for Sp1 transcriptional activation, subunit 6, 77
88.71
48.78
0.379
43.14




kDa


444969
MEMO1
Mediator of cell motility 1
96.52
59.19
0.276
59.89


444986
METAP2
Methionyl aminopeptidase 2
169.09
73.08
0.172
54.25


445081
OAF
OAF homolog (Drosophila)
113.21
58.71
0.345
57.76


445351
LGALS1
Lectin. galactoside-binding. soluble, 1 (galectin 1)
564.16
197.93
0.241
1304.52


445394
VPS29
Vacuolar protein sorting 29 (yeast)
276.97
108.32
0.138
82.01


445498
SNW1
SNW domain containing 1
143.71
69.55
0.138
43.68


445511
RIOK3
RIO kinase 3 (yeast)
110.92
105.70
0.379
54.46


445570
CD63
CD63 antigen (melanoma 1 antigen)
489.45
199.49
0.034
182.09


445803
DC2
DC2 protein
658.16
215.09
0.138
77.15


445893
KHDRBS1
KH domain containing, RNA binding. signal transduction
227.64
88.75
0.138
189.36




associated 1


445977
GTF3A
General transcription factor IIIA
160.66
73.81
0.172
82.05


446017
WSB1
WD repeat and SOCS box-containing 1
239.91
93.71
0.276
231.33


446091
WTAP
Wilms tumor 1 associated protein
119.70
95.46
0.379
83.46


446123
CAPZA2
Capping protein (actin filament) muscle Z-line, alpha 2
370.83
95.48
0.138
88.07


446149
LDHB
Lactate dehydrogenase B
1544.78
120.53
0.000
250.91


446260
PSMA6
Proteasome (prosome, macropain) subunit, alpha type. 6
224.07
106.72
0.172
227.02


446336
PXN
Paxillin
259.56
97.96
0.138
155.02


446345
FTH1
Ferritin, heavy polypeptide 1
2359.77
133.58
0.034
3636.50


446414
CD47
CD47 antigen (Rh-related antigen. integrin-associated signal
165.59
95.67
0.310
83.15




transducer)


446427
OAZ1
Ornithine decarboxylase antizyme 1
673.68
62.71
0.069
576.39


446445
YIF1A
Yip1 interacting factor homolog A (S. cerevisiae)
151.87
80.99
0.276
76.17


446450
ITM2B
Integral membrane protein 2B
511.62
115.21
0.138
528.00


446574
TMSB10
Thymosin. beta 10
524.43
177.08
0.103
1381.46


446588
RPS13
Ribosomal protein S13
183.34
95.13
0.345
603.82


446623
HNRPL
Heterogeneous nuclear ribonucleoprotein L
113.61
53.54
0.276
351.95


446628
RPS4X
Ribosomal protein S4, X-linked
1285.06
89.84
0.000
2026.83


446641
ARAF
V-raf murine sarcoma 3611 viral oncogene homolog
176.49
69.57
0.241
54.08


446852
EIF3S6IP
Eukaryotic translation initiation factor 3. subunit 6 interacting
925.97
188.87
0.034
160.77




protein


447477
ST13
Suppression of tumorigenicity 13 (colon carcinoma) (Hsp70
272.29
141.17
0.103
139.88




interacting protein)


447492
PGAM1
Phosphoglycerate mutase 1 (brain)
781.46
84.70
0.034
498.68


447547
VPS35
Hypothetical protein MGC34800
195.14
67.15
0.103
121.44


448226
RPLP0
Ribosomal protein, large, P0
3809.20
75.92
0.000
1108.65


448588
NGFRAP1
Nerve growth factor receptor (TNFRSF16) associated protein 1
218.09
83.14
0.310
364.70


448646
RPL27A
Ribosomal protein L27a
766.60
139.37
0.276
3106.03


448879
LOC38834
similar to ribosomal protein L13
471.24
99.11
0.069
126.52


449114
HNRPC
Heterogeneous nuclear ribonucleoprotein C (C1/C2)
803.24
90.38
0.034
241.77


449171
HNRPK
Heterogeneous nuclear ribonucleoprotein K
403.79
69.90
0.034
266.35


454534
USF2
Upstream transcription factor 2, c-fos interacting
111.98
76.53
0.310
62.62


454699
IL6ST
Interleukin 6 signal transducer (gp130. oncostatin M receptor)
266.74
139.73
0.103
48.68


456507
KIAA0319L
KIAA0319-like
131.45
85.77
0.241
73.31


456557
C1orf164
chromosome 1 open reading frame 164
143.89
71.60
0.276
116.20


458320
C3orf37
chromosome 3 open reading frame 37
170.49
148.07
0.310
35.84


458358
TSPYL1
Squamous cell carcinoma antigen recognized by T cells 2
101.91
73.81
0.345
127.17


458414
IFITM1
Interferon induced transmembrane protein 1 (9-27)
278.31
223.88
0.345
119.42


458458
FAM108A1
Family with sequence similarity 108. member A1
149.77
96.59
0.276
93.53


458747
ANP32A
Acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
197.57
100.71
0.172
46.30


459106
AZIN1
Antizyme inhibitor 1
209.63
95.22
0.207
49.61


459149
BTBD1
BTB (POZ) domain containing 1
136.20
84.67
0.310
54.21


459174
FAM91A1
Family with sequence similarity 91, member A1
133.90
80.72
0.379
82.35


459211
AKAP13
A kinase (PRKA) anchor protein 13
217.52
97.30
0.310
70.77


459596
MPG
N-methylpurine-DNA glycosylase
110.09
94.77
0.241
78.83


459649
CLCN7
Chloride channel 7
161.09
107.31
0.207
57.89


459927
PTMA
Prothymosin. alpha (gene sequence 28)
1066.55
86.69
0.000
1205.32


459940
LITAF
Lipopolysaccharide-induced TNF factor
184.70
98.75
0.069
118.47


460238
SH3GLB2
SH3-domain GRB2-like endophilin B2
146.60
86.41
0.207
54.58


460317
SETX
Senataxin
132.56
111.94
0.310
59.22


460336
GGA2
Golgi associated. gamma adaptin ear containing. ARF binding
253.27
171.03
0.241
51.31




protein 2


460468
XPO6
Exportin 6
212.84
80.39
0.172
58.36


460499
ATXN2L
Ataxin 2-like
228.25
84.67
0.310
66.95


460574
LOC12444
Hypothetical protein BC017488
125.84
87.37
0.379
74.28


460923
CNOT1
CCR4-NOT transcription complex. subunit 1
173.85
65.75
0.207
67.45


460929
GOT2
Glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate
397.62
79.42
0.103
126.69




aminotransferase 2)


460978
APPBP1
Amyloid beta precursor protein binding protein 1
133.67
64.71
0.241
46.47


461047
G6PD
Glucose-6-phosphate dehydrogenase
274.16
130.32
0.207
81.94


461131
CYB5B
Cytochrome b5 type B (outer mitochondrial membrane)
192.30
75.56
0.138
76.12


461361
CFDP1
Craniofacial development protein 1
111.79
67.73
0.310
79.79


461379
GABARAPL2
GABA(A) receptor-associated protein-like 2
122.55
63.48
0.345
184.34


461722
TRAPPC2L
Trafficking protein particle complex 2-like
97.91
62.09
0.379
78.84


461777
CHMP1A
Chromatin modifying protein 1A
171.31
77.92
0.207
77.23


461896
CRK
V-crk sarcoma virus CT10 oncogene homolog (avian)
158.10
68.61
0.276
68.65


461925
RPA1
Replication protein A1. 70 kDa
160.13
72.42
0.103
83.76


462035
UBE2G1
Ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)
149.46
102.82
0.207
72.02


462086
RPAIN
RPA interacting protein
129.54
77.35
0.379
70.39


462306
UBE2S
Ubiquitin-conjugating enzyme E2S
216.54
74.27
0.310
226.76


462316
TTC19
Hypothetical protein LOC125150
116.49
89.17
0.241
83.84


462492
USP22
Ubiquitin specific peptidase 22
379.95
165.78
0.138
95.69


462550
PIGS
Phosphatidylinositol glycan. class S
164.57
97.00
0.345
61.36


462956
PPARBP
PPAR binding protein
106.51
76.59
0.379
65.65


462998
IGFBP4
Insulin-like growth factor binding protein 4
345.88
87.71
0.207
238.31


463010
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of
173.85
56.13
0.069
51.34




chromatin. subfamily e. member 1


463035
FKBP10
FK506 binding protein 10. 65 kDa
164.51
91.24
0.310
88.10


463041
RERE
Arginine-glutamic acid dipeptide (RE) repeats
200.18
92.99
0.276
112.05


463059
STAT3
Signal transducer and activator of transcription 3 (acute-phase
205.74
114.93
0.207
286.52




response factor)


463295
CDC27
Cell division cycle 27
115.34
79.50
0.310
47.81


463506
AKAP1
A kinase (PRKA) anchor protein 1
124.11
52.64
0.345
401.26


463702
BCAS3
Breast carcinoma amplified sequence 3
98.88
74.57
0.379
44.08


463797
MRTO4
mRNA turnover 4 homolog (S. cerevisiae)
142.20
59.85
0.276
48.55


464071
PGD
Phosphogluconate dehydrogenase
338.78
85.70
0.138
159.65


464137
ACOX1
Acyl-Coenzyme A oxidase 1, palmitoyl
103.04
66.74
0.241
64.57


464210
SYNGR2
Synaptogyrin 2
348.69
97.83
0.276
159.36


464336
P4HB
Procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-
859.74
89.54
0.069
354.48




hydroxylase). beta polypeptide (protein disulfide isomerase-




associated 1)


464438
AGTRAP
Angiotensin II receptor-associated protein
117.55
68.62
0.379
100.58


464472
MRLC2
Myosin regulatory light chain MRLC2
233.35
102.50
0.034
303.55


464595
PPP4R1
Protein phosphatase 4. regulatory subunit 1
181.18
80.16
0.241
61.71


464652
TNFSF5IP1
Tumor necrosis factor superfamily, member 5-induced protein 1
145.59
119.46
0.345
59.73


464912
P15RS
Hypothetical protein FLJ10656
142.03
83.19
0.276
65.87


465224
NARS
Asparaginyl-tRNA synthetase
220.96
70.84
0.103
91.32


465374
EFHD2
EF-hand domain family. member D2
265.91
113.85
0.241
121.77


465498
TXNL4A
Thioredoxin-like 4A
121.61
80.29
0.276
118.06


465529
MIDN
Midnolin
139.65
96.07
0.345
77.19


465543
BTBD2
BTB (POZ) domain containing 2
204.49
98.92
0.207
90.71


465627
MAP2K2
Mitogen-activated protein kinase kinase 2
154.59
85.81
0.310
176.08


465645
C19orf10
Chromosome 19 open reading frame 10
204.93
79.48
0.276
122.81


465808
HNRPM
Heterogeneous nuclear ribonucleoprotein M
258.95
99.76
0.103
126.89


465849
PIN1
Protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1
121.36
61.35
0.310
157.79


465924
SDHB
Succinate dehydrogenase complex. subunit B. iron sulfur (Ip)
161.79
65.94
0.241
76.80


466044
PKN1
Protein kinase N1
252.31
87.50
0.276
62.96


466088
TPM4
Tropomyosin 4
139.00
71.29
0.345
150.55


466148
NR2F6
Nuclear receptor subfamily 2, group F, member 6
179.12
94.04
0.379
157.14


466471
GPI
Glucose phosphate isomerase
502.15
94.80
0.069
172.27


466693
SIRT2
Sirtuin (silent mating type information regulation 2 homolog) 2 (S.
214.11
113.63
0.379
122.41





cerevisiae)



466766
LTBP4
Latent transforming growth factor beta binding protein 4
174.46
77.33
0.379
68.26


466775
SNRPA
Small nuclear ribonucleoprotein polypeptide A
196.94
63.74
0.138
58.13


467084
EIF4G3
Eukaryotic translation initiation factor 4 gamma. 3
102.77
64.71
0.310
58.39


467097
SNRP70
Small nuclear ribonucleoprotein 70 kDa polypeptide (RNP antigen)
294.48
80.04
0.103
100.15


467192
PPP2R1A
Protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65)
475.55
80.67
0.069
102.67




alpha isoform


467279
LENG4
Leukocyte receptor cluster (LRC) member 4
315.24
116.72
0.310
169.43


467284
RPS9
Ribosomal protein S9
986.04
73.58
0.069
638.08


467408
TRIM28
Tripartite motif-containing 28
715.33
79.78
0.138
235.85


467637
CDC42
Cell division cycle 42 (GTP binding protein. 25 kDa)
158.07
97.05
0.138
282.31


467696
HPCAL1
Hippocalcin-like 1
172.64
83.71
0.379
94.69


467701
ODC1
Ornithine decarboxylase 1
351.16
77.30
0.103
112.30


467807
LAPTM4A
Lysosomal-associated protein transmembrane 4 alpha
482.50
88.89
0.069
380.71


467824
PUM2
Pumilio homolog 2 (Drosophila)
153.26
86.50
0.207
60.01


467960
RAB10
RAB10. member RAS oncogene family
162.79
57.31
0.103
100.37


468018
PPP1CB
Protein phosphatase 1, catalytic subunit. beta isoform
203.84
64.65
0.207
243.47


468415
PIGF
Phosphatidylinositol glycan, class F
150.01
71.46
0.241
85.62


468442
CALM2
Calmodulin 2 (phosphorylase kinase. delta)
1841.31
235.41
0.000
448.88


468760
AFTPH
Aftiphilin
93.25
61.52
0.310
56.19


469022
DGUOK
Deoxyguanosine kinase
116.26
75.71
0.241
55.33


469171
C1orf160
Chromosome 1 open reading frame 160
116.05
66.17
0.172
59.47


469331
STARD7
START domain containing 7
312.84
91.19
0.138
3007.75


469820
RALB
V-ral simian leukemia viral oncogene homolog B (ras related: GTF
125.95
59.65
0.379
51.68




binding protein)


469863
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
385.89
74.53
0.034
262.56




activation protein. zeta polypeptide


469925
FAM128B
Family with sequence similarity 128, member B
157.81
62.74
0.345
481.47


469970
SFRS4
Splicing factor, arginine/serine-rich 4
134.13
54.16
0.310
62.81


470091
YWHAE
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
330.87
97.70
0.069
590.76




activation protein. epsilon polypeptide


470233
ARL5A
ADP-ribosylation factor-like 5A
137.43
81.25
0.345
39.57


470417
PEF1
Penta-EF-hand domain containing 1
144.07
63.57
0.241
62.85


470477
PTP4A2
Protein tyrosine phosphatase type IVA. member 2
163.45
69.99
0.103
138.21


470577
EIF2S2
Eukaryotic translation initiation factor 2. subunit 2 beta. 38 kDa
175.54
98.23
0.379
164.48


470588
KPNA6
Karyopherin alpha 6 (importin alpha 7)
105.07
66.63
0.207
91.23


470943
STAT1
Signal transducer and activator of transcription 1. 91 kDa
204.00
91.39
0.207
99.04


471011
SF3B1
Splicing factor 3b, subunit 1, 155 kDa
171.22
65.74
0.276
54.27


471104
NOP5/NOP58
Nucleolar protein NOP5/NOP58
119.95
77.84
0.207
107.80


471207
NDUFS1
NADH dehydrogenase (ubiquinone) Fe—S protein 1, 75 kDa
152.75
64.26
0.207
53.27




(NADH-coenzyme Q reductase)


471441
PSMB2
Proteasome (prosome. macropain) subunit, beta type, 2
160.02
84.75
0.207
132.08


471461
ACSL3
Acyl-CoA synthetase long-chain family member 3
143.25
48.15
0.207
55.56


471593
CAB39
Calcium binding protein 39
125.47
90.94
0.276
71.62


471768
STK40
Serine/threonine kinase 40
150.57
81.43
0.310
76.01


471818
CAPRIN1
Cell cycle associated protein 1
233.39
93.24
0.069
48.75


471851
HDLBP
High density lipoprotein binding protein (vigilin)
770.41
90.63
0.034
284.45


471873
DTYMK
Deoxythymidylate kinase (thymidylate kinase)
151.55
81.98
0.276
61.06


471933
FKBP1A
FK506 binding protein 1A. 12 kDa
264.05
83.21
0.138
166.80


471975
C20orf116
Chromosome 20 open reading frame 116
168.09
95.60
0.379
46.80


472010
PRNP
Prion protein (p27-30) (Creutzfeld-Jakob disease, Gerstmann-
151.22
82.78
0.276
217.32




Strausler-Scheinker syndrome, fatal familial insomnia)


472024
C20orf30
Chromosome 20 open reading frame 30
180.50
82.62
0.138
87.82


472031
UBE2D3
Ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
305.38
72.17
0.069
161.41


472038
UTP11L
UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
116.49
107.41
0.379
46.16


472056
SYNCRIP
Synaptotagmin binding, cytoplasmic RNA interacting protein
198.01
71.24
0.103
97.30


472119
MKKS
McKusick-Kaufman syndrome
110.70
82.99
0.276
43.01


472185
NDUFS5
NADH dehydrogenase (ubiquinone) Fe—S protein 5, 15 kDa
317.85
115.06
0.172
175.84




(NADH-coenzyme Q reductase)


472213
RRBP1
Ribosome binding protein 1 homolog 180 kDa (dog)
194.55
81.99
0.276
81.63


472330
C20orf3
Chromosome 20 open reading frame 3
210.62
71.28
0.345
111.23


472475
MACF1
Glycine-rich protein (GRP3S)
170.84
81.77
0.310
117.24


472535
AURKAIP1
Aurora kinase A interacting protein 1
236.28
92.32
0.345
87.41


472558
ERGIC3
ERGIC and golgi 3
273.22
82.09
0.138
150.94


472651
BLCAP
Bladder cancer associated protein
174.08
74.85
0.241
69.65


472737
TOP1
Topoisomerase (DNA) I
145.07
71.88
0.310
79.62


473296
TPD52L2
Tumor protein D52-like 2
198.42
74.39
0.172
87.51


473583
YBX1
Y box binding protein 1
706.53
98.38
0.034
340.36


473648
GART
Phosphoribosylglycinamide formyltransferase,
159.98
70.49
0.138
51.98




phosphoribosylglycinamide synthetase,




phosphoribosylaminoimidazole synthetase


473721
SLC2A1
Solute carrier family 2 (facilitated glucose transporter), member 1
496.75
142.19
0.345
157.66


473761
RTN3
Reticulon 3
222.45
76.58
0.103
160.89


473788
OTUB1
OTU domain, ubiquitin aldehyde binding 1
235.08
75.48
0.207
93.09


474005
SUMO3
SMT3 suppressor of mif two 3 homolog 3 (yeast)
224.13
104.97
0.138
71.57


474010
PTTG1IP
Pituitary tumor-transforming 1 interacting protein
472.39
85.43
0.138
111.37


474053
COL6A1
Collagen, type VI, alpha 1
240.21
60.68
0.345
421.26


474083
B4GALT2
UDP-Gal: betaGlcNAc beta 1,4-galactosyltransferase, polypeptidtext missing or illegible when filed
118.57
65.47
0.345
74.49




2


474213
UFD1L
Ubiquitin fusion degradation 1 like (yeast)
117.12
72.56
0.276
42.38


474584
AKR1A1
Aldo-keto reductase family 1. member A1 (aldehyde reductase)
216.03
70.29
0.138
94.42


474643
C22orf28
Chromosome 22 open reading frame 28
331.66
109.80
0.138
100.93


474751
MYH9
Myosin. heavy polypeptide 9, non-muscle
426.57
109.52
0.069
127.27


474833
CSNK1E
Casein kinase 1, epsilon
193.49
86.78
0.138
68.93


474914
RUTBC3
RUN and TBC1 domain containing 3
190.23
157.68
0.345
74.06


474938
SLC25A17
Solute carrier family 25 (mitochondrial carrier; peroxisomal
113.70
81.93
0.345
33.74




membrane protein, 34 kDa). member 17


474949
RBX1
Ring-box 1
145.55
82.29
0.241
69.67


474982
ACO2
Aconitase 2, mitochondrial
307.04
91.01
0.034
105.23


475125
ATXN10
Ataxin 10
198.54
95.44
0.172
118.31


475319
LRRFIP2
Leucine rich repeat (in FLII) interacting protein 2
104.35
72.12
0.310
69.04


475382
MTMR14
Myotubularin related protein 14
149.47
83.39
0.172
114.62


475392
TMEM111
Transmembrane protein 111
136.12
88.37
0.379
46.89


475663
RAB5A
RAB5A, member RAS oncogene family
119.70
91.27
0.241
74.69


475733
TOP2B
Topoisomerase (DNA) II beta 180 kDa
180.06
113.03
0.172
121.72


475812
STT3B
STT3, subunit of the oligosaccharyltransferase complex. homolog
108.24
76.02
0.310
55.56




B (S. cerevisiae)


476018
CTNNB1
Catenin (cadherin-associated protein), beta 1, 88 kDa
138.21
58.20
0.310
215.94


476033
TXNDC12
Thioredoxin domain containing 12 (endoplasmic reticulum)
146.57
70.89
0.172
52.90


476179
SMARCC1
SWI/SNF related, matrix associated, actin dependent regulator of
171.16
127.75
0.138
91.06




chromatin, subfamily c, member 1


476221
IHPK2
Inositol hexaphosphate kinase 2
145.26
55.31
0.241
77.62


476231
IMPDH2
IMP (inosine monophosphate) dehydrogenase 2
1006.91
110.38
0.034
120.62


476308
ALAS1
Aminolevulinate, delta-, synthase 1
132.82
82.50
0.345
50.43


476365
SCP2
Sterol carrier protein 2
690.56
180.11
0.276
125.14


476448
FLNB
Filamin B, beta (actin binding protein 278)
189.01
103.49
0.310
56.29


476706
MRPL37
Mitochondrial ribosomal protein L37
249.66
66.27
0.172
97.03


476930
CHMP2B
Chromatin modifying protein 2B
143.22
100.41
0.310
73.54


477157
DULLARD
Dullard homolog (Xenopus laevis)
158.37
96.36
0.103
97.30


477789
ATP1B3
ATPase. Na+/K+ transporting. beta 3 polypeptide
167.45
84.60
0.138
135.93


477892
GYG1
Glycogenin 1
151.92
63.62
0.345
54.22


478000
MBNL1
Muscleblind-like (Drosophila)
304.13
90.08
0.241
61.18


478044
PA2G4
Proliferation-associated 2G4, 38 kDa
460.10
87.56
0.103
157.68


478553
EIF4A2
Eukaryotic translation initiation factor 4A, isoform 2
403.21
91.85
0.069
357.47


479208
FBXL5
F-box and leucine-rich repeat protein 5
140.68
84.67
0.276
55.97


479264
LAP3
Leucine aminopeptidase 3
140.16
84.68
0.241
106.91


479634
SLC30A9
Solute carrier family 30 (zinc transporter), member 9
123.90
63.55
0.379
75.32


479693
SFRS11
Splicing factor, arginine/serine-rich 11
189.39
69.99
0.172
199.97


479728
GAPDH
Glyceraldehyde-3-phosphate dehydrogenase
7330.72
80.18
0.000
3167.05


479747
BCAR1
Breast cancer anti-estrogen resistance 1
183.08
85.45
0.310
58.32


479814
POLR2B
Polymerase (RNA) II (DNA directed) polypeptide B, 140 kDa
170.30
62.57
0.310
102.92


480073
HNRPD
Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNtext missing or illegible when filed
229.02
68.01
0.103
241.33




binding protein 1, 37 kDa)


480311
PDLIM5
PDZ and LIM domain 5
273.24
235.65
0.241
95.21


480465
SCYE1
Small inducible cytokine subfamily E. member 1 (endothelial
107.39
55.27
0.276
55.39




monocyte-activating)


480653
ANXA5
Annexin A5
303.60
104.16
0.069
169.77


481571
UQCRH
Similar to Ubiquinol-cytochrome C reductase complex 11 kDa
229.54
102.84
0.138
431.88




protein. mitochondrial precursor (Mitochondrial hinge protein)




(Cytochrome C1, nonheme 11 kDa protein) (Complex III subunit




VIII)


481720
MYO10
Myosin X
140.50
130.53
0.310
91.75


481898
CCBL2
Cysteine conjugate-beta lyase 2
134.41
54.32
0.310
48.63


482144
RPL26
Similar to 60S ribosomal protein L26
447.43
95.30
0.034
699.37


482363
SLC30A5
Solute carrier family 30 (zinc transporter), member 5
78.30
56.98
0.379
57.46


482526
TINP1
TGF beta-inducible nuclear protein 1
121.52
61.06
0.241
173.99


482868
KIAA0372
KIAA0372
126.07
60.99
0.241
71.13


483036
PJA2
Praja 2, RING-H2 motif containing
158.62
65.91
0.276
72.48


483067
C5orf13
Chromosome 5 open reading frame 13
318.12
190.12
0.379
195.11


483305
HINT1
Histidine triad nucleotide binding protein 1
236.40
118.42
0.207
113.38


483408
PPP2CA
Protein phosphatase 2 (formerly 2A). catalytic subunit, alpha
230.50
94.12
0.138
105.32




isoform


483454
CNN3
Calponin 3, acidic
211.93
89.89
0.207
399.33


483486
JMJD1B
Jumonji domain containing 1B
107.12
52.95
0.310
64.58


484138
FBXW11
F-box and WD-40 domain protein 11
117.64
68.50
0.379
109.27


484188
ATP6V0E1
ATPase, H+ transporting, lysosomal 9 kDa, V0 subunit e1
159.10
68.32
0.138
71.54


484242
UBXD8
UBX domain containing 8
125.98
75.93
0.207
66.51


484288
DDX41
DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
214.13
74.98
0.138
47.70


484363
RNF130
Ring finger protein 130
97.65
67.32
0.138
111.91


484551
CPM
Carboxypeptidase M
186.28
78.16
0.310
71.14


484813
DEK
DEK oncogene (DNA binding)
260.77
83.22
0.172
114.27


485155
RPL35
Ribosomal protein L35
281.04
111.39
0.172
1995.97


485195
SORT1
Sortilin 1
150.82
80.52
0.345
91.72


485246
PSMA5
Proteasome (prosome, macropain) subunit, alpha type. 5
164.31
83.49
0.207
72.99


485262
MTCH1
Mitochondrial carrier homolog 1 (C. elegans)
364.72
91.85
0.103
222.02


485365
AHCYL1
S-adenosylhomocysteine hydrolase-like 1
182.57
61.85
0.207
87.98


485616
DST
Dystonin
144.43
74.83
0.276
159.14


486542
BCLAF1
BCL2-associated transcription factor 1
184.76
58.42
0.207
57.11


487027
VIL2
Villin 2 (ezrin)
228.59
71.02
0.138
203.46


487054
TCP1
T-complex 1
209.76
78.62
0.138
162.70


487635
BZW2
Basic leucine zipper and W2 domains 2
250.31
146.18
0.172
96.11


487774
HNRPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1
218.53
87.55
0.103
476.18


488171
NUDCD3
NudC domain containing 3
607.73
183.50
0.034
2935.95


488181
OGDH
Oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
245.90
110.90
0.207
93.55


488307
ECOP
EGFR-coamplified and overexpressed protein
151.47
75.46
0.345
105.70


488478
C7orf42
Chromosome 7 open reading frame 42
151.66
70.90
0.207
70.53


488671
BAZ1B
Bromodomain adjacent to zinc finger domain. 1B
114.54
65.20
0.207
97.87


489207
ASNS
Asparagine synthetase
262.06
124.38
0.172
159.98


489284
ARPC1B
Actin related protein 2/3 complex. subunit 1B. 41 kDa
555.08
109.32
0.103
249.26


489287
CPSF4
Cleavage and polyadenylation specific factor 4, 30 kDa
171.76
69.89
0.172
88.36


489336
SYAP1
Synapse associated protein 1. SAP47 homolog (Drosophila)
126.10
45.09
0.310
51.70


489615
PBEF1
Pre-B-cell colony enhancing factor 1
211.67
111.85
0.276
110.09


490203
CALD1
Caldesmon 1
242.44
103.25
0.207
84.05


490394
SSBP1
Single-stranded DNA binding protein 1
444.28
309.52
0.241
86.70


490415
ZYX
Zyxin
259.67
90.01
0.138
278.36


490745
DNAJB6
DnaJ (Hsp40) homolog. subfamily B. member 6
182.26
74.39
0.103
170.33


490795
FAM62B
Family with sequence similarity 62 (C2 domain containing)
256.81
139.32
0.276
67.48




member B


490874
MTX1
Metaxin 1
139.52
83.02
0.310
62.57


491336
ELP3
Elongation protein 3 homolog (S. cerevisiae)
98.38
59.66
0.379
43.04


491359
LMNA
Lamin A/C
797.11
108.53
0.138
415.19


491440
PPP2CB
Protein phosphatase 2 (formerly 2A). catalytic subunit. beta
146.90
77.42
0.276
218.31




isoform


491494
CCT3
Chaperonin containing TCP1, subunit 3 (gamma)
1152.31
109.73
0.034
207.97


491597
VDAC3
Voltage-dependent anion channel 3
189.10
60.03
0.207
82.40


491695
UBE2V2
Ubiquitin-conjugating enzyme E2 variant 2
1324.03
205.58
0.276
58.78


491745
TCEA1
Transcription elongation factor A (SII). 1
180.17
63.49
0.241
69.36


491988
TRAM1
Translocation associated membrane protein 1
151.74
62.44
0.172
147.67


492236
WDR42A
WD repeat domain 42A
135.63
62.96
0.310
61.94


492314
LAPTM4B
Lysosomal associated protein transmembrane 4 beta
315.85
98.92
0.138
124.30


492445
UBR5
Ubiquitin protein ligase E3 component n-recognin 5
133.59
70.25
0.345
51.32


492599
EIF3S3
Eukaryotic translation initiation factor 3, subunit 3 gamma, 40 kDa
457.44
91.86
0.069
165.21


492805
NMD3
NMD3 homolog (S. cerevisiae)
154.69
68.25
0.276
64.99


493362
AK3L1
Adenylate kinase 3
138.22
63.01
0.241
49.75


493750
WDR40A
WD repeat domain 40A
158.95
64.13
0.345
28.58


494173
ANXA1
Annexin A1
663.71
206.40
0.138
439.06


494419
LAMP1
Lysosomal-associated membrane protein 1
278.30
123.84
0.276
112.59


494457
NINJ1
Ninjurin 1
146.99
120.17
0.379
192.87


494604
ANP32B
Acidic (leucine-rich) nuclear phosphoprotein 32 family. member B
297.30
74.71
0.069
142.74


494614
BAT2D1
BAT2 domain containing 1
103.03
72.44
0.310
133.29


494691
PFN1
Profilin 1
582.68
96.95
0.069
1198.54


494700
SLC44A1
Solute carrier family 44, member 1
156.34
79.78
0.379
88.15


494985
FBXW2
F-box and WD-40 domain protein 2
97.45
68.65
0.379
40.27


495039
NDUFA8
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex. 8, 19
100.91
70.67
0.345
82.23


495349
KIAA0515
KIAA0515
213.73
62.92
0.069
129.84


495471
PMPCA
Peptidase (mitochondrial processing) alpha
174.09
84.07
0.172
85.88


495605
CD99
CD99 antigen
171.31
62.16
0.138
198.26


495851
APOO
Apolipoprotein O
144.33
80.53
0.345
129.92


495960
ATP6AP2
ATPase. H+ transporting. lysosomal accessory protein 2
177.66
91.25
0.276
67.87


496068
PCTK1
PCTAIRE protein kinase 1
177.60
80.15
0.207
56.40


496098
OTUD5
OTU domain containing 5
171.08
119.61
0.207
43.34


496271
?
Full-length cDNA clone CS0DJ002YF04 of T cells (Jurkat cell linetext missing or illegible when filed
552.58
198.74
0.172
70.79




Cot 10-normalized of Homo sapiens (human)


496487
ATF4
Activating transcription factor 4 (tax-responsive enhancer element
644.83
92.22
0.069
179.34




B67)


496646
IL13RA1
Interleukin 13 receptor. alpha 1
117.23
77.35
0.310
54.24


496684
LAMP2
Lysosomal-associated membrane protein 2
175.62
85.98
0.241
127.56


497183
IVNS1ABP
Influenza virus NS1A binding protein
156.30
56.55
0.241
76.25


497599
WARS
Tryptophanyl-tRNA synthetase
328.30
141.43
0.103
158.85


497692
NSL1
NSL1, MIND kinetochore complex component. homolog (S.
142.41
132.49
0.379
45.74





cerevisiae)



497893
ENAH
Enabled homolog (Drosophila)
133.62
90.22
0.276
73.14


498239
FH
Fumarate hydratase
304.63
108.28
0.276
51.25


498313
ADSS
Adenylosuccinate synthase
138.41
96.89
0.276
66.59


498317
C1orf121
Chromosome 1 open reading frame 121
139.90
108.25
0.379
67.33


498455
LARP5
La ribonucleoprotein domain family, member 5
142.32
72.97
0.241
56.84


498548
RBM17
RNA binding motif protein 17
119.60
106.34
0.207
84.57


498727
DHCR24
24-dehydrocholesterol reductase
380.21
178.18
0.207
125.92


499145
YME1L1
YME1-like 1 (S. cerevisiae)
218.20
87.96
0.241
85.44


499158
GGA1
Golgi associated. gamma adaptin ear containing. ARF binding
149.92
94.46
0.276
59.38




protein 1


499594
TIMM23
Translocase of inner mitochondrial membrane 23 homolog (yeast)
116.05
77.66
0.241
46.30


499833
REEP3
Receptor accessory protein 3
97.26
86.49
0.345
48.48


499891
HNRPH3
Heterogeneous nuclear ribonucleoprotein H3 (2H9)
152.75
70.91
0.103
103.56


499925
VPS26A
Vacuolar protein sorting 26 homolog A (S. pombe)
129.39
63.83
0.172
66.21


499960
SAR1A
SAR1 gene homolog A (S. cerevisiae)
122.18
69.10
0.172
87.25


500067
PPP3CB
Protein phosphatase 3 (formerly 2B). catalytic subunit. beta
120.27
66.72
0.241
124.28




isoform (calcineurin A beta)


500101
VCL
Vinculin
197.78
102.19
0.207
122.06


500375
ENTPD6
Ectonucleoside triphosphate diphosphohydrolase 6 (putative
163.42
84.78
0.276
93.92




function)


500409
GLUD1
Glutamate dehydrogenase 1
161.37
95.54
0.138
228.78


500546
IDE
Insulin-degrading enzyme
112.83
68.82
0.310
46.45


500674
TM9SF3
Transmembrane 9 superfamily member 3
215.50
58.43
0.207
132.96


500775
ZNF207
Zinc finger protein 207
233.29
62.27
0.034
165.68


500842
MGEA5
Meningioma expressed antigen 5 (hyaluronidase)
179.67
93.93
0.310
194.92


500874
CUEDC2
CUE domain containing 2
129.96
52.06
0.310
136.22


501012
ADD3
Adducin 3 (gamma)
223.70
119.75
0.310
80.79


501023
MXI1
MAX interactor 1
94.44
62.74
0.345
62.06


501203
TIAL1
TIA1 cytotoxic granule-associated RNA binding protein-like 1
146.01
73.16
0.276
75.46


501293
BSG
Basigin (OK blood group)
737.88
112.29
0.103
664.58


501309
CIRBP
Cold inducible RNA binding protein
265.44
117.90
0.034
203.81


501353
PLEKHJ1
Pleckstrin homology domain containing, family J member 1
100.87
56.61
0.379
75.27


501376
UROS
Uroporphyrinogen III synthase (congenital erythropoietic porphyria)
130.07
71.33
0.241
54.58


501420
NCLN
Nicalin homolog (zebrafish)
177.01
86.48
0.241
51.28


501629
IER2
Immediate early response 2
140.79
60.99
0.241
197.55


501684
NAP1L4
Nucleosome assembly protein 1-like 4
166.93
111.13
0.138
77.93


501735
STIM1
Stromal interaction molecule 1
117.62
71.87
0.276
85.58


501853
TMEM9B
TMEM9 domain family, member B
110.79
91.41
0.379
55.61


501924
USP47
Ubiquitin specific peptidase 47
132.14
118.32
0.345
43.63


501991
MLSTD2
Male sterility domain containing 2
96.74
62.95
0.379
51.17


502302
CAT
Catalase
158.19
107.96
0.345
78.26


502328
CD44
CD44 antigen (homing function and Indian blood group system)
366.11
100.63
0.172
183.18


502461
DGKZ
Diacylglycerol kinase. zeta 104 kDa
109.99
96.64
0.310
78.41


502528
NDUFS3
NADH dehydrogenase (ubiquinone) Fe—S protein 3. 30 kDa
119.28
75.88
0.207
151.30




(NADH-coenzyme Q reductase)


502630
C11orf31
Chromosome 11 open reading frame 31
170.27
98.83
0.276
149.13


502659
RHOC
Ras homolog gene family, member C
253.62
101.47
0.138
234.42


502705
PRPF19
PRP19/PSO4 pre-mRNA processing factor 19 homolog (S.
198.31
100.04
0.276
84.60





cerevisiae)



502745
FADS2
Fatty acid desaturase 2
266.18
116.45
0.276
221.93


502769
SLC3A2
Solute carrier family 3 (activators of dibasic and neutral amino acitext missing or illegible when filed
276.24
84.47
0.138
123.67




transport). member 2


502773
ADI1
Acireductone dioxygenase 1
159.84
55.74
0.103
57.70


502823
PRDX5
Peroxiredoxin 5
183.65
76.11
0.241
216.88


502829
SF1
Splicing factor 1
263.86
66.20
0.069
141.67


502836
ARL2
ADP-ribosylation factor-like 2
134.06
114.72
0.310
119.31


502842
CAPN1
Calpain 1. (mu/l) large subunit
287.11
101.89
0.207
88.58


502872
MAP3K11
Mitogen-activated protein kinase kinase kinase 11
128.70
82.13
0.276
72.97


502876
RHOB
Ras homolog gene family, member B
165.00
92.57
0.310
283.76


503093
ZFP36L2
Zinc finger protein 36, C3H type-like 2
150.79
67.83
0.207
280.17


503222
RAB6A
RAB6A, member RAS oncogene family
152.69
73.96
0.241
119.21


503251
PPME1
Protein phosphatase methylesterase 1
123.71
52.56
0.207
59.51


503597
HSPC148
Hypothetical protein HSPC148
107.89
76.02
0.276
58.03


503709
TMEM123
Transmembrane protein 123
339.10
161.64
0.172
79.34


503716
DCUN1D5
DCN1, defective in cullin neddylation 1. domain containing 5 (S.
167.32
87.13
0.138
54.63





cerevisiae)



503787
DARS
Aspartyl-tRNA synthetase
147.34
55.17
0.138
100.30


504237
STT3A
STT3, subunit of the oligosaccharyltransferase complex. homolog
117.19
108.95
0.345
77.26




A (S. cerevisiae)


504517
RPS27
Tetraspanin 9
176.40
121.62
0.379
2547.00


504613
PTMS
Parathymosin
175.13
81.37
0.345
308.10


504620
PHB2
Prohibitin 2
506.51
79.86
0.069
136.79


504687
MYL9
Elongation factor Tu family protein
343.66
100.94
0.379
340.49


504828
DDX47
DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
130.63
59.08
0.379
43.21


504895
STRAP
Serine/threonine kinase receptor associated protein
221.43
95.09
0.138
122.68


505033
KRAS
v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
115.82
83.04
0.310
57.38


505059
PSMD4
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
259.00
62.63
0.103
180.27


505625
C12orf10
Chromosome 12 open reading frame 10
105.33
77.88
0.345
80.93


505652
COPZ1
Coatomer protein complex, subunit zeta 1
204.89
87.20
0.000
217.03


505676
CIP29
Cytokine induced protein 29 kDa
184.81
88.39
0.241
118.62


505705
MYL6
Myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
438.52
109.87
0.069
1121.48


505806
PBXIP1
Pre-B-cell leukemia transcription factor interacting protein 1
115.75
83.63
0.310
72.04


505824
SAMM50
Sorting and assembly machinery component 50 homolog (S.
242.60
117.59
0.172
59.28





cerevisiae)



506215
RARS
Arginyl-tRNA synthetase
192.15
85.96
0.172
103.05


506325
NUDT4
Nudix (nucleoside diphosphate linked moiety X)-type motif 4
121.40
87.04
0.379
161.89




pseudogene 2


506759
ATP2A2
ATPase. Ca++ transporting. cardiac muscle. slow twitch 2
375.19
241.76
0.241
195.37


506861
DDX54
DEAD (Asp-Glu-Ala-Asp) box polypeptide 54
199.70
104.77
0.241
74.73


507074
KIAA0152
KIAA0152
244.90
89.86
0.069
77.13


507162
VPS37B
Vacuolar protein sorting 37 homolog B (S. cerevisiae)
142.45
79.66
0.276
143.42


507584
POLR1D
Polymerase (RNA) I polypeptide D. 16 kDa
121.94
73.07
0.241
107.77


507680
PFAAP5
Phosphonoformate immuno-associated protein 5
143.30
68.40
0.345
63.32


507910
PGRMC2
Progesterone receptor membrane component 2
131.09
75.85
0.207
124.83


507916
TSC22D1
TSC22 domain family. member 1
344.52
102.84
0.172
243.46


508010
FNDC3A
Fibronectin type III domain containing 3A
264.21
157.30
0.241
110.98


508644
FLJ10154
Hypothetical protein FLJ10154
183.99
75.88
0.310
65.60


509163
ERGIC1
Endoplasmic reticulum-golgi intermediate compartment (ERGIC)
1147.54
71.85
0.103
94.35


509226
FKBP3
FK506 binding protein 3, 25 kDa
146.28
97.77
0.241
140.21


509264
KLHDC2
Kelch domain containing 2
117.21
72.23
0.207
121.90


509414
KTN1
Kinectin 1 (kinesin receptor)
196.92
103.65
0.207
88.75


509622
RGL2
Ral guanine nucleotide dissociation stimulator-like 2
136.36
70.20
0.345
93.28


509736
HSP90AB1
Heat shock protein 90 kDa alpha (cytosolic), class B member 1
2045.82
87.83
0.000
550.72


509791
ERH
Enhancer of rudimentary homolog (Drosophila)
148.95
80.20
0.207
256.46


509909
NUMB
Numb homolog (Drosophila)
115.97
62.99
0.241
58.22


510087
ENSA
Endosulfine alpha
196.15
70.81
0.034
159.53


510328
DDX24
DEAD (Asp-Glu-Ala-Asp) box polypeptide 24
446.38
126.73
0.103
75.63


510402
CD46
CD46 molecule, complement regulatory protein
255.43
87.89
0.276
81.27


511067
FAM82C
Family with sequence similarity 82. member C
193.94
125.16
0.345
39.66


511138
TMEM87A
Transmembrane protein 87A
153.90
71.25
0.241
82.26


511149
SNAP23
Synaptosomal-associated protein, 23 kDa
159.76
70.15
0.276
51.21


511425
SRP9
Signal recognition particle 9 kDa
1439.84
206.14
0.069
454.09


511504
TCF12
Transcription factor 12 (HTF4. helix-loop-helix transcription factortext missing or illegible when filed
175.22
83.75
0.276
69.32




4)


511862

Similar to 60S acidic ribosomal protein P1
182.40
88.27
0.379
84.86


511952
CBX6
Chromobox homolog 6
153.88
81.20
0.276
64.59


512005
ARPC3
Actin related protein 2/3 complex. subunit 3, 21 kDa
175.09
73.61
0.241
119.68


512465
SURF4
Surfeit 4
272.49
79.31
0.069
106.55


512525
RPS17
Ribosomal protein S17
1561.21
128.47
0.069
599.75


512607
MIR16
Membrane interacting protein of RGS16
243.63
112.71
0.207
98.46


512640
PRKCSH
Protein kinase C substrate 80K-H
369.95
87.75
0.172
131.74


512661
ISY1
ISY1 splicing factor homolog (S. cerevisiae)
247.17
110.21
0.241
115.05


512676
RPS25
Ribosomal protein S25
200.49
132.68
0.241
286.69


512693
METT11D1
Methyltransferase 11 domain containing 1
119.37
86.98
0.345
29.73


512756
THAP7
THAP domain containing 7
139.40
88.58
0.345
51.73


512815
AP3D1
Adaptor-related protein complex 3, delta 1 subunit
260.40
98.20
0.034
107.57


512857
CD151
CD151 antigen
289.17
93.65
0.207
378.94


512867
CASC4
Cancer susceptibility candidate 4
130.94
70.38
0.207
100.14


512908
ARPP-19
Cyclic AMP phosphoprotein. 19 kD
226.51
76.75
0.207
146.97


513043
IMP3
IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)
135.64
58.16
0.310
47.55


513055
WDR61
WD repeat domain 61
114.60
53.12
0.345
70.68


513057
RANBP5
RAN binding protein 5
280.02
118.69
0.172
101.08


513058
TMED3
Transmembrane emp24 protein transport domain containing 3
180.01
81.33
0.138
114.71


513071
MESDC1
Mesoderm development candidate 1
153.38
113.49
0.276
50.82


513083
RPL9
Ribosomal protein L9
1564.85
164.78
0.034
740.57


513141
IDH2
Isocitrate dehydrogenase 2 (NADP+). mitochondrial
276.13
73.73
0.103
172.64


513145
NGRN
Neugrin. neurite outgrowth associated
292.66
85.21
0.034
91.71


513153
FURIN
Furin (paired basic amino acid cleaving enzyme)
171.95
95.68
0.379
67.56


513230
MRPL28
Mitochondrial ribosomal protein L28
206.58
141.00
0.241
67.94


513242
RHOT2
Ras homolog gene family. member T2
146.56
66.79
0.345
59.56


513261
HN1L
Hematological and neurological expressed 1-like
169.07
73.84
0.138
62.28


513266
NDUFB10
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22
141.77
93.82
0.345
42.16


513470
NFATC2IP
Nuclear factor of activated T-cells, cytoplasmic. calcineurin-
123.18
55.34
0.310
30.57




dependent 2 interacting protein


513488
MVP
Major vault protein
276.00
95.97
0.276
79.08


513490
ALDOA
Aldolase A. fructose-bisphosphate
1575.38
81.23
0.034
916.32


513520
BCKDK
Branched chain ketoacid dehydrogenase kinase
181.01
99.21
0.276
51.25


513522
FUS
Fusion (involved in t(12; 16) in malignant liposarcoma)
402.21
88.89
0.034
172.34


513631
ARL2BP
ADP-ribosylation factor-like 2 binding protein
133.32
76.06
0.379
60.80


513856
DPH1
DPH1 homolog (S. cerevisiae)
153.80
77.15
0.172
162.16


513984
FLIl
Flightless l homolog (Drosophila)
218.66
80.64
0.103
61.58


514012
MAP2K3
Mitogen-activated protein kinase kinase 3
206.91
198.73
0.379
68.18


514036
SDF2
Stromal cell-derived factor 2
139.48
83.16
0.379
49.32


514038
FLOT2
Flotillin 2
205.94
75.37
0.241
103.22


514174
JUP
Junction plakoglobin
311.95
175.04
0.310
204.87


514196
RPL27
Ribosomal protein L27
445.53
163.18
0.103
927.28


514211
TMEM101
Transmembrane protein 101
207.70
66.43
0.345
109.02


514216
SLC25A39
Solute carrier family 25. member 39
372.09
78.71
0.103
162.85


514220
GRN
Granulin
569.94
118.75
0.103
216.06


514297
UBE2Z
Ubiquitin-conjugating enzyme E2Z (putative)
149.22
70.83
0.172
84.41


514303
PHB
Prohibitin
337.86
78.21
0.103
142.93


514435
SF3B3
Splicing factor 3b, subunit 3. 130 kDa
245.52
67.98
0.138
44.20


514489
WBP2
WW domain binding protein 2
367.18
97.07
0.138
147.04


514535
LGALS3BP
Lectin. galactoside-binding. soluble. 3 binding protein
714.12
134.59
0.172
117.40


514581
ACTG1
Actin, gamma 1
6790.08
96.54
0.000
1374.42


514590
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate
234.48
89.80
0.241
88.17


514819
AP2B1
Adaptor-related protein complex 2, beta 1 subunit
184.47
53.67
0.207
92.79


514870
ATP5F1
ATP synthase, H+ transporting, mitochondrial F0 complex, subuni
441.56
130.47
0.034
84.88




b, isoform 1


514920
CALCOCO
Calcium binding and coiled-coil domain 2
151.26
76.62
0.241
46.59


514934
CAPZA1
Capping protein (actin filament) muscle Z-line, alpha 1
232.49
84.07
0.276
101.72


515003
C19orf6
Chromosome 19 open reading frame 6
218.92
96.61
0.172
96.49


515005
STK11
Serine/threonine kinase 11 (Peutz-Jeghers syndrome)
127.27
85.12
0.379
66.15


515018
GNA13
Guanine nucleotide binding protein (G protein). alpha 13
162.22
105.65
0.345
72.69


515053
AES
Amino-terminal enhancer of split
314.90
95.73
0.138
258.48


515070
EEF2
Eukaryotic translation elongation factor 2
403.41
101.00
0.034
2097.60


515092
CLPP
ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
173.03
103.29
0.241
50.27




homolog (E. coli)


515155
C19orf43
Chromosome 19 open reading frame 43
161.94
77.42
0.138
117.34


515162
CALR
Calreticulin
575.58
88.03
0.034
110.24


515164
GADD45GIP1
Growth arrest and DNA-damage-inducible, gamma interacting
191.12
69.42
0.276
107.72




protein 1


515210
DNAJB1
DnaJ (Hsp40) homolog, subfamily B. member 1
233.68
80.33
0.207
330.45


515255
LSM4
LSM4 homolog. U6 small nuclear RNA associated (S. cerevisiae)
266.66
105.98
0.276
139.77


515266
UPF1
UPF1 regulator of nonsense transcripts homolog (yeast)
163.88
99.99
0.276
60.23


515271
SFRS14
Splicing factor, arginine/serine-rich 14
124.30
81.86
0.310
47.59


515329
RPL22
Ribosomal protein L22
191.43
75.49
0.138
455.30


515371
CAPNS1
Calpain. small subunit 1
404.46
95.10
0.069
519.15


515406
AKT2
V-akt murine thymoma viral oncogene homolog 2
139.00
124.72
0.345
101.41


515417
EGLN2
Egl nine homolog 2 (C. elegans)
257.04
138.23
0.379
141.94


515432
DEDD2
Death effector domain containing 2
94.65
52.25
0.379
52.49


515472
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide 16.5 kDa
292.31
154.43
0.207
250.23


515475
SYMPK
Symplekin
133.18
53.29
0.241
43.73


515487
CALM3
Calmodulin 3 (phosphorylase kinase. delta)
439.26
95.22
0.069
170.52


515494
SLC1A5
Solute carrier family 1 (neutral amino acid transporter), member 5
448.32
106.79
0.138
90.90


515500
SAE1
SUMO-1 activating enzyme subunit 1
380.21
79.67
0.034
84.41


515515
KDELR1
KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention
261.62
81.81
0.138
278.16




receptor 1


515517
RPL18
Ribosomal protein L18
743.38
74.48
0.103
361.65


515524
NUCB1
Nucleobindin 1
350.34
117.21
0.103
177.67


515540
PTOV1
Prostate tumor overexpressed gene 1
175.30
98.47
0.172
165.98


515550
LOC284361
Hematopoietic signal peptide-containing
135.48
82.61
0.310
234.71


515598
PRPF31
PRP31 pre-mRNA processing factor 31 homolog (yeast)
368.40
151.24
0.276
57.93


515607
PPP1R12C
Protein phosphatase 1, regulatory (inhibitor) subunit 12C
165.22
97.14
0.379
50.41


515642
GPSN2
Glycoprotein, synaptic 2
171.37
74.21
0.345
122.06


515785
BLVRB
Biliverdin reductase B (flavin reductase (NADPH))
143.92
94.30
0.310
182.67


515846
RUVBL2
RuvB-like 2 (E. coli)
354.78
98.40
0.138
97.93


515848
HADHB
Hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme
213.42
90.90
0.103
98.50




thiolase/enoyl-Coenzyme A hydratase (trifunctional protein). beta




subunit


515890
YPEL5
Yippee-like 5 (Drosophila)
181.92
82.16
0.276
123.75


516075
TIA1
TIA1 cytotoxic granule-associated RNA binding protein
183.23
80.58
0.310
93.19


516077
FLJ14668
Hypothetical protein FLJ14668
112.96
75.82
0.276
61.98


516087
TEX261
Testis expressed sequence 261
146.81
110.15
0.241
33.17


516111
DCTN1
Dynactin 1 (p150. glued homolog. Drosophila)
261.96
94.41
0.103
64.73


516114
WBP1
WW domain binding protein 1
114.03
56.61
0.310
42.16


516157
MAT2A
Methionine adenosyltransferase II. alpha
195.52
68.87
0.172
242.05


516450
SMPD4
Sphingomyelin phosphodiesterase 4, neutral membrane (neutral
248.30
97.54
0.172
118.46




sphingomyelinase-3)


516522
INTS3
Integrator complex subunit 3
142.16
102.91
0.379
59.15


516539
HNRPA3
Heterogeneous nuclear ribonucleoprotein A3
223.52
72.69
0.138
168.69


516587
UBE2Q1
Ubiquitin-conjugating enzyme E2Q (putative) 1
131.58
55.37
0.345
69.25


516633
NCKAP1
NCK-associated protein 1
198.42
62.97
0.241
153.54


516711
CHPF
Chondroitin polymerizing factor
213.73
142.81
0.379
128.03


516790
ARHGEF2
Rho/rac guanine nucleotide exchange factor (GEF) 2
133.62
84.47
0.379
59.83


516807
STK25
Serine/threonine kinase 25 (STE20 homolog, yeast)
455.41
109.35
0.138
64.72


516826
TRIB3
Tribbles homolog 3 (Drosophila)
228.24
99.31
0.241
50.84


516855
CENPB
Centromere protein B. 80 kDa
202.67
80.52
0.276
82.21


517080
SLC35C2
Solute carrier family 35, member C2
163.93
94.82
0.207
60.57


517106
CEBPB
CCAAT/enhancer binding protein (C/EBP), beta
178.82
93.37
0.345
155.23


517134
C20orf43
Chromosome 20 open reading frame 43
247.39
69.92
0.069
79.36


517145
ENO1
Enolase 1, (alpha)
3401.32
102.15
0.000
166.84


517168
TAGLN2
Transgelin 2
626.02
75.92
0.069
595.39


517216
PEA15
Phosphoprotein enriched in astrocytes 15
283.17
82.20
0.172
201.83


517232
PEX19
Peroxisomal biogenesis factor 19
151.27
57.99
0.207
78.36


517240
IFNGR2
Interferon gamma receptor 2 (interferon gamma transducer 1)
158.55
79.26
0.172
79.49


517262
SON
SON DNA binding protein
197.08
79.92
0.138
111.91


517293
F11R
F11 receptor
215.86
109.54
0.276
1045.83


517338
ATP6V1E1
ATPase. H+ transporting. lysosomal 31 kDa. V1 subunit E isoform
197.20
81.17
0.069
122.60




1


517342
DEDD
Death effector domain containing
136.31
62.93
0.276
55.11


517356
COL18A1
Collagen, type XVIII, alpha 1
388.40
175.92
0.345
169.44


517357
DGCR2
DiGeorge syndrome critical region gene 2
214.17
92.03
0.241
88.38


517421
PCQAP
PC2 (positive cofactor 2. multiprotein complex) glutamine/Q-rich-
205.74
178.98
0.241
70.11




associated protein


517438
ASCC2
Activating signal cointegrator 1 complex subunit 2
138.59
89.52
0.138
46.79


517517
EP300
E1A binding protein p300
124.61
92.25
0.379
70.50


517543
PES1
Pescadillo homolog 1, containing BRCT domain (zebrafish)
242.64
124.33
0.276
66.78


517582
MCM5
MCM5 minichromosome maintenance deficient 5, cell division
424.00
105.24
0.172
49.05




cycle 46 (S. cerevisiae)


517622
UNC84B
Unc-84 homolog B (C. elegans)
131.34
80.16
0.310
86.59


517641
L3MBTL2
L(3)mbt-like 2 (Drosophila)
116.46
67.43
0.345
35.18


517666
CYB5R3
Cytochrome b5 reductase 3
314.58
161.98
0.138
125.03


517731
TRABD
TraB domain containing
180.88
102.41
0.276
83.26


517768
BRP44
Brain protein 44
127.10
104.51
0.345
90.63


517792
C3orf10
Chromosome 3 open reading frame 10
175.04
80.24
0.069
101.16


517817
TMEM43
Transmembrane protein 43
136.66
75.36
0.310
40.01


517821

CDNA clone IMAGE: 5278517
120.53
66.29
0.310
154.05


517888
CRTAP
Cartilage associated protein
208.15
77.38
0.207
87.57


517948
DHX30
DEAH (Asp-Glu-Ala-His) box polypeptide 30
209.13
121.04
0.207
70.11


517949
MAP4
Microtubule-associated protein 4
306.69
79.18
0.103
204.68


517969
APEH
N-acylaminoacyl-peptide hydrolase
330.37
60.97
0.207
65.68


517981
TUSC2
Tumor suppressor candidate 2
129.92
69.61
0.310
47.18


518060
ARL6IP5
ADP-ribosylation-like factor 6 interacting protein 5
303.59
116.09
0.207
144.14


518123
TFG
TRK-fused gene
189.81
59.70
0.138
95.89


518236
SEC61A1
Sec61 alpha 1 subunit (S. cerevisiae)
272.42
82.37
0.138
130.33


518244
RPN1
Ribophorin I
232.54
86.03
0.172
155.16


518249
CNBP
CCHC-type zinc finger. nucleic acid binding protein
307.66
69.72
0.034
229.80


518250
COPG
Coatomer protein complex, subunit gamma
205.51
104.21
0.276
130.03


518265
CDV3
CDV3 homolog (mouse)
192.56
91.81
0.138
187.87


518326
SERP1
Stress-associated endoplasmic reticulum protein 1
233.71
64.27
0.069
106.11


518346
SSR3
Signal sequence receptor, gamma (translocon-associated protein
133.69
62.65
0.241
92.36




gamma)


518374
QSOX1
Quiescin Q6 sulfhydryl oxidase 1
151.71
84.80
0.310
145.16


518424
NDUFB5
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16 kDa
625.19
180.45
0.276
63.18


518460
AP2M1
Adaptor-related protein complex 2, mu 1 subunit
584.10
76.35
0.069
110.88


518464
PSMD2
Proteasome (prosome, macropain) 26S subunit, non-ATPase. 2
538.23
93.02
0.103
173.46


518525
GLUL
Glutamate-ammonia ligase (glutamine synthetase)
326.37
86.68
0.138
580.48


518551
RPL31
Ribosomal protein L31
883.50
204.46
0.103
1315.12


518608
MRFAP1L1
Morf4 family associated protein 1-like 1
107.24
53.27
0.172
87.02


518609
ARPC5
Actin related protein 2/3 complex, subunit 5, 16 kDa
226.65
65.59
0.172
86.13


518750
OCIAD1
OCIA domain containing 1
121.73
78.62
0.172
557.63


518805
HMGA1
High mobility group AT-hook 1
1583.57
131.69
0.172
519.78


518827
CCNI
Cyclin I
495.99
157.57
0.034
378.10


519276
MAPKAPK2
Mitogen-activated protein kinase-activated protein kinase 2
172.89
87.16
0.172
110.38


519304
PELO
Pelota homolog (Drosophila)
204.10
151.63
0.310
91.66


519346
ERBB2IP
Erbb2 interacting protein
171.05
83.90
0.241
52.83


519347
SFRS12
Splicing factor. arginine/serine-rich 12
99.98
49.97
0.310
53.48


519520
RPS25
Ribosomal protein S25
717.45
181.09
0.034
1253.26


519523
SERPINB6
Serpin peptidase inhibitor, clade B (ovalbumin). member 6
180.64
74.06
0.172
97.35


519557
TMEM14C
Transmembrane protein 14C
139.62
70.39
0.276
71.79


519718
TTC1
Tetratricopeptide repeat domain 1
119.41
63.74
0.276
51.02


519756
STK10
Serine/threonine kinase 10
131.85
89.36
0.379
33.36


519818
MGAT1
Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-
179.60
85.97
0.138
124.43




acetylglucosaminyltransferase


519909
MARCKS
Myristoylated alanine-rich protein kinase C substrate
360.12
219.46
0.310
315.50


519930
C6orf62
Chromosome 6 open reading frame 62
131.39
63.83
0.138
140.39


520026
VARS2
Valyl-tRNA synthetase
317.40
77.78
0.241
122.24


520028
HSPA1A
Heat shock 70 kDa protein 1A
267.63
174.20
0.241
697.50


520037
NEU1
Sialidase 1 (lysosomal sialidase)
229.35
119.62
0.310
108.45


520070
CUTA
CutA divalent cation tolerance homolog (E. coli)
154.48
68.26
0.207
234.43


520140
SRF
Serum response factor (c-fos serum response element-binding
130.75
59.73
0.379
78.21




transcription factor)


520189
ELOVL5
ELOVL family member 5. elongation of long chain fatty acids
137.81
70.07
0.276
92.84




(FEN1/Elo2, SUR4/Elo3-like, yeast)


520205
EIF2AK1
Eukaryotic translation initiation factor 2-alpha kinase 1
238.20
66.39
0.138
137.26


520210
KDELR2
KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention
225.97
94.83
0.138
163.28




receptor 2


520287
C6orf111
Chromosome 6 open reading frame 111
170.77
69.67
0.207
51.33


520313
CD164
CD164 antigen. sialomucin
387.43
78.65
0.172
179.75


520383
STX7
Syntaxin 7
200.61
198.70
0.379
62.05


520421
PERP
PERP. TP53 apoptosis effector
278.10
105.31
0.379
142.93


520459
GTF2I
General transcription factor II. i
179.36
111.40
0.345
291.72


520623
C7orf27
Chromosome 7 open reading frame 27
107.46
71.73
0.345
33.85


520640
ACTB
Actin, beta
4381.34
95.98
0.034
1348.49


520740
SCRN1
Secernin 1
162.41
76.80
0.276
116.36


520794
YKT6
SNARE protein Ykt6
322.61
99.65
0.276
50.36


520898
CTSB
Cathepsin B
555.78
100.98
0.034
454.52


520943
EIF4H
Eukaryotic translation initiation factor 4H
520.03
71.02
0.069
219.24


520967
MDH2
Malate dehydrogenase 2, NAD (mitochondrial)
368.83
66.26
0.069
186.05


520973
HSPB1
Heat shock 27 kDa protein 1
608.95
126.99
0.138
466.81


520974
YWHAG
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
171.99
87.92
0.310
260.44




activation protein, gamma polypeptide


521064
ZNF655
Zinc finger protein 655
100.31
68.90
0.379
78.88


521151
ZNF672
Zinc finger protein 672
185.36
113.36
0.310
46.43


521289
REPIN1
Replication initiator 1
220.03
101.31
0.172
86.72


521487
TMEM66
Transmembrane protein 66
276.62
74.21
0.138
363.27


521640
RAD23B
RAD23 homolog B (S. cerevisiae)
334.78
294.31
0.241
1470.83


521809
RP13-
Cofactor of BRCA1
180.78
84.61
0.172
78.57



122B23.3


521903
LY6E
Lymphocyte antigen 6 complex, locus E
425.61
138.70
0.172
224.92


521924
SIAHBP1
Fuse-binding protein-interacting repressor
381.93
82.10
0.103
89.56


521969
NDUFB11
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11. 17.3
144.58
114.75
0.379
136.30




kDa


521973
WDR13
WD repeat domain 13
177.47
106.14
0.172
49.95


522074
TSC22D3
TSC22 domain family, member 3
194.81
93.94
0.207
98.72


522110
CREB3
CAMP responsive element binding protein 3
153.05
94.31
0.241
42.72


522114
CLTA
Clathrin, light polypeptide (Lca)
317.85
88.44
0.103
155.26


522310
NANS
N-acetylneuraminic acid synthase (sialic acid synthase)
114.60
62.52
0.310
91.19


522373
GSN
Gelsolin (amyloidosis. Finnish type)
434.41
204.85
0.138
323.96


522394
HSPA5
Heat shock 70 kDa protein 5 (glucose-regulated protein. 78 kDa)
367.53
102.24
0.172
784.29


522463
EEF1A1
Eukaryotic translation elongation factor 1 alpha 1
9324.87
148.86
0.000
3936.86


522507
FBXW5
F-box and WD-40 domain protein 5
199.15
90.48
0.276
108.16


522584
TMSB4X
Thymosin, beta 4, X-linked
1362.45
161.68
0.172
1985.02


522590
EIF1AX
Eukaryotic translation initiation factor 1A. X-linked
136.35
67.99
0.207
125.35


522632
TIMP1
TIMP metallopeptidase inhibitor 1
386.91
180.87
0.241
193.45


522665
MAGED2
Melanoma antigen family D, 2
430.71
110.49
0.138
74.89


522675
LAS1L
LAS1-like (S. cerevisiae)
201.59
69.13
0.241
56.35


522752
PSMD10
Proteasome (prosome. macropain) 26S subunit, non-ATPase, 10
122.91
60.90
0.276
74.90


522817
BCAP31
B-cell receptor-associated protein 31
290.93
84.50
0.172
110.80


522819
IRAK1
Interleukin-1 receptor-associated kinase 1
382.94
97.80
0.138
147.41


522823
EMD
Emerin (Emery-Dreifuss muscular dystrophy)
171.35
87.58
0.379
89.83


522932
NCOA4
Nuclear receptor coactivator 4
209.19
70.05
0.138
63.66


522995
EIF4EBP2
Eukaryotic translation initiation factor 4E binding protein 2
176.81
73.83
0.103
72.69


523004
PSAP
Prosaposin (variant Gaucher disease and variant metachromatic
1098.27
123.65
0.034
854.93




leukodystrophy)


523012
DDIT4
DNA-damage-inducible transcript 4
415.15
125.10
0.276
174.92


523054
TMEM50A
Transmembrane protein 50A
139.64
109.41
0.276
109.08


523131
TRAPPC3
Trafficking protein particle complex 3
139.68
66.61
0.310
61.64


523145
DDOST
Dolichyl-diphosphooligosaccharide-protein glycosyltransferase
338.02
90.17
0.103
119.03


523215
NDUFB8
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8. 19 kDa
199.51
106.37
0.172
132.65


523238
NOLC1
Nucleolar and coiled-body phosphoprotein 1
176.02
83.34
0.138
97.37


523262
TMEM59
Transmembrane protein 59
262.49
95.63
0.069
168.88


523299
EIF3S10
Eukaryotic translation initiation factor 3, subunit 10 theta. 150/170
180.25
76.56
0.172
112.29




kDa


523302
PRDX3
Peroxiredoxin 3
948.84
182.31
0.138
83.94


523560
HSP90AA2
Heat shock protein 90 kDa alpha (cytosolic), class A member 2
971.87
81.16
0.000
822.83


523680
SSRP1
Structure specific recognition protein 1
259.94
67.23
0.138
128.11


523789
TncRNA
Trophoblast-derived noncoding RNA
290.76
109.38
0.310
400.45


523829
POLD4
Polymerase (DNA-directed), delta 4
192.79
92.64
0.310
73.03


523836
GSTP1
Glutathione S-transferase pi
363.83
79.45
0.103
390.11


523852
CCND1
Cyclin D1
257.94
79.21
0.310
315.81


523875
INPPL1
Inositol polyphosphate phosphatase-like 1
198.48
82.78
0.310
52.62


524009
AASDHPPT
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheiny
139.83
74.10
0.345
73.36




transferase


524081
DPAGT1
Dolichyl-phosphate (UDP-N-acetylglucosamine) N-
125.85
78.99
0.345
43.70




acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase


524084
RNF26
Ring finger protein 26
170.50
95.60
0.310
45.76


524161
RSU1
Ras suppressor protein 1
173.91
80.13
0.276
81.94


524171
RAD52
RAD52 homolog (S. cerevisiae)
128.36
73.88
0.345
57.90


524183
FKBP4
FK506 binding protein 4, 59 kDa
345.04
165.12
0.138
195.27


524195
ARHGAP2
Rho GTPase activating protein 21
118.87
87.10
0.379
102.62


524214
MLF2
Myeloid leukemia factor 2
271.91
68.75
0.138
109.61


524219
TPI1
Triosephosphate isomerase 1
1085.58
88.77
0.069
928.11


524271
PHC2
Polyhomeotic-like 2 (Drosophila)
333.79
105.07
0.138
59.03


524367
CBARA1
Calcium binding atopy-related autoantigen 1
133.75
65.29
0.207
95.25


524395
TUBA1A
Tubulin, alpha 1a
423.08
127.26
0.241
779.97


524464
ATP5G2
ATP synthase, H+ transporting. mitochondrial F0 complex, subuni
300.01
124.98
0.172
295.35




c (subunit 9), isoform 2


524502
RNF41
Ring finger protein 41
110.38
68.59
0.241
55.12


524530
CTDSP2
CTD (carboxy-terminal domain, RNA polymerase II. polypeptide A
286.91
136.97
0.103
54.40




small phosphatase 2


524590
RAB21
RAB21, member RAS oncogene family
112.13
48.40
0.379
39.33


524599
NAP1L1
60S ribosomal protein L6 (RPL6A)
559.97
99.14
0.034
179.39


524690
PPIE
Peptidylprolyl isomerase E (cyclophilin E)
224.33
109.34
0.207
60.86


524788
RAB35
RAB35, member RAS oncogene family
97.18
65.96
0.379
47.40


524809
CLIP1
CAP-GLY domain containing linker protein 1
121.91
90.76
0.345
71.42


524899
SAP18
Sin3-associated polypeptide, 18 kDa
129.03
72.41
0.172
89.47


524920
ZFP91
Zinc finger protein 91 homolog (mouse)
126.10
83.51
0.207
99.40


524969
UFM1
Ubiquitin-fold modifier 1
172.41
84.47
0.310
85.23


525134
POMGNT1
Protein O-linked mannose beta1,2-N-
161.82
102.74
0.345
77.25




acetylglucosaminyltransferase


525163
ANKRD10
Ankyrin repeat domain 10
156.22
79.59
0.207
92.10


525232
LRP10
Low density lipoprotein receptor-related protein 10
201.98
129.16
0.138
71.88


525238
C14orf119
Chromosome 14 open reading frame 119
141.96
104.26
0.276
130.29


525330
ARF6
ADP-ribosylation factor 6
191.66
134.63
0.103
129.69


525391
C1orf123
Chromosome 1 open reading frame 123
98.24
87.20
0.310
44.15


525527
RER1
RER1 retention in endoplasmic reticulum 1 homolog (S.
137.56
72.32
0.310
57.33





cerevisiae)



525626
PACS2
Phosphofurin acidic cluster sorting protein 2
126.74
98.42
0.345
36.14


525899
C6orf49
Chromosome 6 open reading frame 49
144.67
83.87
0.172
114.56


526464
PML
Promyelocytic leukemia
129.51
84.95
0.345
75.33


526521
MDH1
Malate dehydrogenase 1, NAD (soluble)
414.98
150.61
0.103
302.75


527105
HNRPDL
Heterogeneous nuclear ribonucleoprotein D-like
215.39
95.16
0.207
425.77


527193
RPS23
Ribosomal protein S23
178.23
128.51
0.207
1153.32


527348
AKAP9
A kinase (PRKA) anchor protein (Yotiao) 9
103.64
60.76
0.310
39.34


527412
ASAH1
N-acylsphingosine amidohydrolase (acid ceramidase) 1
216.47
95.28
0.241
124.23


527861
OS9
Amplified in osteosarcoma
317.55
151.86
0.138
157.27


527862
PKD1
Hypothetical protein LOC339047
142.25
87.72
0.345
135.27


527980
DUT
DUTP pyrophosphatase
150.77
79.02
0.207
96.02


528050
HARS
HistidyI-tRNA synthetase
171.62
84.32
0.138
39.25


528222
NDUFS4
NADH dehydrogenase (ubiquinone) Fe—S protein 4. 18 kDa
112.10
94.04
0.276
72.79




(NADH-coenzyme Q reductase)


528300
PITRM1
Pitrilysin metallopeptidase 1
122.00
61.07
0.276
46.35


528305
DDX17
DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
298.20
91.95
0.138
235.95


528572
SORBS3
Sorbin and SH3 domain containing 3
187.70
104.57
0.345
62.31


528668
RPL6
Ribosomal protein L6
1037.68
85.03
0.034
572.62


528780
GSPT1
G1 to S phase transition 1
170.88
56.71
0.138
73.97


528803
UQCRC2
Ubiquinol-cytochrome c reductase core protein II
272.39
84.82
0.103
118.93


529059
EIF3S4
Eukaryotic translation initiation factor 3, subunit 4 delta. 44 kDa
311.33
92.44
0.172
112.54


529132
SEPW1
Selenoprotein W. 1
231.08
110.89
0.276
115.82


529244
NCK2
NCK adaptor protein 2
236.70
169.13
0.345
42.17


529280
ANAPC7
Anaphase promoting complex subunit 7
94.04
52.31
0.379
51.63


529303
ARPC2
Actin related protein 2/3 complex, subunit 2. 34 kDa
329.77
127.35
0.034
204.04


529369
AFAP1
Actin filament associated protein 1
101.03
56.96
0.379
54.85


529400
IFNAR1
Interferon (alpha, beta and omega) receptor 1
108.71
56.53
0.310
76.16


529420
UBE2G2
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)
160.64
100.65
0.103
928.90


529591
TLOC1
Translocation protein 1
141.82
65.80
0.172
80.62


529618
TFRC
Transferrin receptor (p90, CD71)
212.76
85.52
0.241
89.51


529631
RPL35A
Ribosomal protein L35a
453.58
173.13
0.103
891.99


529782
VCP
Valosin-containing protein
532.58
85.03
0.034
173.75


529798
BTF3
Basic transcription factor 3
400.11
94.96
0.069
270.43


529862
CSNK1A1
Casein kinase 1. alpha 1
210.72
69.09
0.103
102.92


529890
CANX
Calnexin
399.31
129.28
0.069
448.92


529892
SQSTM1
Sequestosome 1
789.12
108.86
0.034
194.96


529957
SEC63
SEC63-like (S. cerevisiae)
120.12
80.80
0.276
70.58


530096
EIF3S2
Eukaryotic translation initiation factor 3. subunit 2 beta. 36 kDa
451.94
86.61
0.034
284.86


530118
LUC7L2
LUC7-like 2 (S. cerevisiae)
132.76
59.55
0.172
74.65


530291
ANXA11
Annexin A11
279.25
86.71
0.069
75.64


530314
SSNA1
Sjogren's syndrome nuclear autoantigen 1
122.20
58.54
0.379
75.26


530331
PDHA1
Pyruvate dehydrogenase (lipoamide) alpha 1
179.99
79.37
0.207
104.89


530381
PIM3
Pim-3 oncogene
114.61
72.86
0.345
42.02


530412
SERBP1
SERPINE1 mRNA binding protein 1
289.56
66.47
0.069
569.26


530436
STXBP3
Syntaxin binding protein 3
113.84
77.40
0.276
71.84


530479
PMF1
Polyamine-modulated factor 1
128.35
73.53
0.241
60.22


530687
RNH1
Ribonuclease/angiogenin inhibitor 1
342.47
102.27
0.172
126.29


530734
MRPL16
Mitochondrial ribosomal protein L16
106.22
67.89
0.345
48.51


530753
C11orf59
Chromosome 11 open reading frame 59
153.75
63.46
0.276
132.79


530823
COPS7A
COP9 constitutive photomorphogenic homolog subunit 7A
202.70
132.83
0.138
52.43




(Arabidopsis)


530862
PRKAG1
Protein kinase. AMP-activated. gamma 1 non-catalytic subunit
136.75
73.16
0.241
38.26


531081
LGALS3
Lectin. galactoside-binding. soluble. 3 (galectin 3)
318.01
134.08
0.241
403.19


531089
PSMA3
Proteasome (prosome. macropain) subunit. alpha type. 3
218.40
93.16
0.276
54.35


531176
SARS
Seryl-tRNA synthetase
297.55
88.08
0.138
137.35


531330
CBWD1
COBW domain containing 2
123.09
79.22
0.310
125.23


531614
BTBD14B
BTB (POZ) domain containing 14B
123.09
63.39
0.310
79.33


531752
RANBP3
RAN binding protein 3
122.49
64.65
0.310
44.32


531856
GAS5
Growth arrest-specific 5
227.80
134.55
0.241
609.96


531876
DYNLRB1
Dynein, light chain, roadblock-type 1
167.51
104.22
0.241
122.79


531879
RAD1
RAD1 homolog (S. pombe)
115.15
74.02
0.379
58.80


532359
RPL5
Ribosomal protein L5
747.39
72.96
0.000
682.59


532399
ZC3H11A
Zinc finger CCCH-type containing 11A
139.50
74.48
0.241
64.34


532755
C16orf80
Chromosome 16 open reading frame 80
95.17
63.38
0.207
37.29


532790
NMT1
N-myristoyltransferase 1
165.97
105.96
0.172
94.43


532793
KPNB1
Karyopherin (importin) beta 1
568.94
129.62
0.000
88.10


532803
HN1
Hematological and neurological expressed 1
225.82
90.89
0.103
218.39


532826
MCL1
Myeloid cell leukemia sequence 1 (BCL2-related)
252.48
83.80
0.207
221.93


532853
NDUFB7
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18 kDa
145.80
84.03
0.345
150.66


533030
TRIOBP
TRIO and F-actin binding protein
339.95
148.19
0.207
108.55


533059
TUBB
Tubulin, beta polypeptide
2476.41
87.07
0.000
423.10


533122
SFRS10
Splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
182.52
60.97
0.034
111.10





Drosophila)



533136
LRPAP1
Low density lipoprotein receptor-related protein associated protein
234.76
108.38
0.207
119.75




1


533192
TOMM20
Translocase of outer mitochondrial membrane 20 homolog (yeast)
208.87
77.43
0.138
133.51


533222
DIMT1L
DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)
129.17
69.14
0.379
42.41


533245
DDX46
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
118.53
50.97
0.345
51.51


533282
NONO
Non-POU domain containing. octamer-binding
842.92
104.94
0.034
184.07


533308
PPP2R5D
Protein phosphatase 2. regulatory subunit B (B56). delta isoform
223.23
100.62
0.138
47.46


533317
VIM
Vimentin
1800.81
137.19
0.069
658.72


533437
TCEB1
Transcription elongation factor B (SIII). polypeptide 1 (15 kDa.
121.08
94.03
0.276
103.33




elongin C)


533440
WWP1
WW domain containing E3 ubiquitin protein ligase 1
146.51
87.93
0.345
60.09


533474
PPP1R8
Protein phosphatase 1, regulatory (inhibitor) subunit 8
95.08
118.26
0.379
50.60


533479
LYPLA2
Lysophospholipase II
223.79
59.26
0.276
107.17


533526
ATRX
Alpha thalassemia/mental retardation syndrome X-linked (RAD54
149.83
61.38
0.276
73.22




homolog, S. cerevisiae)


533624
H3F3A
H3 histone. family 3A
322.44
81.23
0.103
986.85


533712
RBM4
RNA binding motif protein 4
169.22
66.18
0.138
54.47


533732
SRP14
Signal recognition particle 14 kDa (homologous Alu RNA binding
223.87
85.87
0.172
350.32




protein)


533771
STUB1
STIP1 homology and U-box containing protein 1
238.45
84.03
0.241
74.01


533782
KRT8
Keratin 8
1307.25
94.61
0.379
1096.00


533977
TXNIP
Thioredoxin interacting protein
429.73
92.27
0.034
105.46


533985
EXOC7
Exocyst complex component 7
168.92
93.23
0.276
83.81


533986
ZMYM6
Zinc finger, MYM-type 6
99.16
62.99
0.310
42.97


534125
HLA-C
Major histocompatibility complex. class I. C
610.10
155.80
0.034
477.32


534168
NDUFA1
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex. 1, 7.5
261.51
202.07
0.310
304.79




kDa


534212
SEC22B
SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
107.96
68.79
0.379
57.75


534255
B2M
Beta-2-microglobulin
1303.98
172.16
0.000
2594.12


534307
CCND3
Cyclin D3
471.76
356.89
0.207
49.64


534314
EIF5A
Eukaryotic translation initiation factor 5A
438.38
88.29
0.207
745.09


534326
ITGB4BP
Integrin beta 4 binding protein
360.06
78.91
0.103
132.91


534338
PPP4C
Protein phosphatase 4 (formerly X). catalytic subunit
191.52
75.42
0.138
85.04


534346
RPS7
Ribosomal protein S7
572.81
120.27
0.000
458.06


534350
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of
210.96
162.57
0.172
56.06




chromatin. subfamily b. member 1


534453
NDUFA13
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex. 13
194.91
119.87
0.138
355.30


534456
ANAPC11
APC11 anaphase promoting complex subunit 11 homolog (yeast)
164.01
99.17
0.172
159.17


534457
C14orf166
Chromosome 14 open reading frame 166
171.37
66.04
0.138
73.01


534473
TOMM22
Translocase of outer mitochondrial membrane 22 homolog (yeast)
144.72
100.10
0.207
64.20


534483
PHF23
PHD finger protein 23
123.34
63.04
0.276
43.74


536275
PACS1
Phosphofurin acidic cluster sorting protein 1
217.82
86.00
0.345
46.64


541269
NDUFB9
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9. 22 kDa
269.72
132.31
0.172
420.59


546248
CTSD
Cathepsin D (lysosomal aspartyl peptidase)
660.73
119.52
0.103
104.98


546250
DYNC1I2
Dynein. cytoplasmic 1, intermediate chain 2
154.54
71.13
0.172
166.85


546253
FDFT1
Farnesyl-diphosphate farnesyltransferase 1
249.53
81.90
0.034
124.83


546261
HNRPA1
Heterogeneous nuclear ribonucleoprotein A1
649.46
94.55
0.000
470.61


546269
RPL10A
Ribosomal protein L10a
706.14
175.46
0.103
1748.03


546271
PCBP2
Poly(rC) binding protein 2
293.34
87.15
0.103
451.52


546286
RPS3
Ribosomal protein S3
2290.87
95.60
0.000
1021.82


546289
RPS12
Ribosomal protein S12
527.74
281.85
0.103
1459.28


546290
RPS18
Ribosomal protein S18
939.29
233.81
0.069
1853.80


546291
RPS27
Ribosomal protein S27 (metallopanstimulin 1)
725.59
382.56
0.172
55.70


546339
C11orf58
Chromosome 11 open reading frame 58
580.69
190.75
0.138
99.65


546356
RPL13A
Ribosomal protein L13a
1352.43
84.32
0.000
3663.74


546394
CCDC72
Coiled-coil domain containing 72
244.28
200.01
0.241
175.77


547759
SSBP3
Single stranded DNA binding protein 3
124.35
57.76
0.310
76.79


549178
C9orf86
Chromosome 9 open reading frame 86
219.13
114.79
0.138
106.75


552590
HTF9C
Hpall tiny fragments locus 9C
107.24
77.34
0.276
37.92


553496
PGM3
Phosphoglucomutase 3
103.08
61.39
0.379
48.42


553512
MBOAT5
Membrane bound O-acyltransferase domain containing 5
124.81
75.10
0.310
81.43


554767
NUP88
Nucleoporin 88 kDa
120.01
86.75
0.345
41.31


554776
SREBF1
Sterol regulatory element binding transcription factor 1
171.91
88.02
0.276
65.79


554894
WDR54
WD repeat domain 54
114.62
72.99
0.345
48.56


554896
C7orf50
Chromosome 7 open reading frame 50
193.18
101.69
0.207
156.46


555194
FAM36A
Family with sequence similarity 36, member A
120.40
52.67
0.276
115.74


555866
C1QBP
Complement component 1. q subcomponent binding protein
312.33
77.95
0.138
179.94


555873
HNRPAB
Heterogeneous nuclear ribonucleoprotein A/B
316.21
89.74
0.034
87.52


555875
IDH3A
Isocitrate dehydrogenase 3 (NAD+) alpha
143.01
87.51
0.345
43.03


555889
PSMC2
Proteasome (prosome, macropain) 26S subunit. ATPase, 2
219.37
69.24
0.172
67.04


555890
RBBP4
Retinoblastoma binding protein 4
204.72
80.47
0.172
148.13


555911
RBM8A
RNA binding motif protein 8A
125.26
75.03
0.172
110.86


555969
RIC8A
Resistance to inhibitors of cholinesterase 8 homolog A (C.
261.31
93.56
0.172
42.50





elegans)



555971
TMBIM1
Transmembrane BAX inhibitor motif containing
219.28
114.17
0.207
100.55


555973
MRPS25
Mitochondrial ribosomal protein S25
152.15
62.00
0.207
47.22


555994
LONP2
Ion peptidase 2. peroxisomal
135.95
87.69
0.379
37.87


556267
FBXL10
F-box and leucine-rich repeat protein 10
81.84
65.86
0.379
39.65


556461
NDUFV2
NADH dehydrogenase (ubiquinone) flavoprotein 2. 24 kDa
146.86
108.59
0.207
99.23


556795
PAICS
Phosphoribosylaminoimidazole carboxylase.
253.76
89.34
0.138
122.76




phosphoribosylaminoimidazole succinocarboxamide synthetase


557550
NPM1
Nucleophosmin (nucleolar phosphoprotein B23, numatrin)
1675.95
168.64
0.000
707.78


558296
ACP1
Acid phosphatase 1, soluble
123.31
58.79
0.172
76.31


558313
COX6A1
Cytochrome c oxidase subunit VIa polypeptide 1
170.58
93.53
0.241
268.12


558322
EEF1B2
Eukaryotic translation elongation factor 1 beta 2
450.71
94.79
0.034
725.93


558325
EIF5
Eukaryotic translation initiation factor 5
232.38
85.09
0.172
121.20


558328
FKBP5
FK506 binding protein 5
117.84
59.52
0.310
88.77


558330
FTL
Ferritin, light polypeptide
2521.41
158.72
0.069
1268.35


558338
HSPE1
Heat shock 10 kDa protein 1 (chaperonin 10)
270.37
133.18
0.207
259.73


558345
IK
IK cytokine, down-regulator of HLA II
252.13
99.25
0.138
52.12


558354
RPSA
Ribosomal protein SA
1322.76
86.38
0.034
2215.71


558360
NDUFB4
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15 kDa
211.99
145.77
0.345
213.80


558361
NME2
Non-metastatic cells 2, protein (NM23B) expressed in
300.76
113.65
0.276
377.22


558362
NUMA1
Nuclear mitotic apparatus protein 1
186.63
72.04
0.207
70.26


558376
RAC1
Ras-related C3 botulinum toxin substrate 1 (rho family, small GTP
310.27
151.23
0.000
423.24




binding protein Rac1)


558381
SNORA65
Small nucleolar RNA, H/ACA box 65
182.13
140.06
0.172
167.44


558382
RPL15
Ribosomal protein L15
675.76
128.40
0.000
247.73


558383
RPL18A
Ribosomal protein L18a
705.56
175.27
0.034
1510.30


558384
RPL19
Ribosomal protein L19
526.89
137.15
0.034
913.52


558385
RPL23A
Ribosomal protein L23a
699.13
138.42
0.069
591.06


558386
RPL34
Ribosomal protein L34
697.35
378.17
0.069
994.94


558388
RPS3A
Ribosomal protein S3A
2474.40
122.86
0.034
1599.66


558389
RPS8
Ribosomal protein S8
962.64
129.92
0.000
1884.53


558390
RPS24
Ribosomal protein S24
612.43
101.36
0.034
1096.04


558391
RPS26
Ribosomal protein S26
165.48
119.11
0.276
1253.30


558396
SCD
Stearoyl-CoA desaturase (delta-9-desaturase)
914.63
104.45
0.069
153.06


558424
CSDA
Cold shock domain protein A
226.19
107.82
0.103
153.84


558426
EIF3S5
Eukaryotic translation initiation factor 3. subunit 5 epsilon, 47 kDa
303.80
92.52
0.172
111.38


558429
BUD31
BUD31 homolog (S. cerevisiae)
144.18
63.32
0.172
74.41


558431
RPL14
Ribosomal protein L14
572.84
76.90
0.069
374.90


558442
PDCD6IP
Programmed cell death 6 interacting protein
197.37
92.14
0.241
62.39


558448
TXNL2
Thioredoxin-like 2
190.19
99.31
0.276
111.05


558453
ATP5L
ATP synthase. H+ transporting, mitochondrial F0 complex, subuni
303.51
169.99
0.172
614.08




g


558454
NUDC
Nuclear distribution gene C homolog (A. nidulans)
366.87
118.17
0.207
97.57


558458
COPS8
COP9 constitutive photomorphogenic homolog subunit 8
143.44
86.61
0.207
41.97




(Arabidopsis)


558473
C18orf10
Chromosome 18 open reading frame 10
143.75
80.47
0.172
66.89


558499
CD320
CD320 molecule
188.81
75.95
0.379
45.84


558511
PARL
Presenilin associated, rhomboid-like
126.27
91.30
0.276
60.47


558521
C2orf33
Chromosome 2 open reading frame 33
133.19
79.12
0.241
84.37


558591
ORMDL1
ORM1-like 1 (S. cerevisiae)
156.16
85.13
0.345
92.26


558825
PDE4DIP
Phosphodiesterase 4D interacting protein (myomegalin)
192.79
111.41
0.241
95.41


558995
C1orf151
Chromosome 1 open reading frame 151
718.64
244.03
0.103
115.01


567260
CD2BP2
CD2 antigen (cytoplasmic tail) binding protein 2
161.65
79.42
0.207
55.10


567263
C1orf43
Chromosome 1 open reading frame 43
337.41
80.70
0.172
106.63


567267
ATP2C1
ATPase. Ca++ transporting. type 2C. member 1
95.02
60.83
0.345
74.61


567279
SAP30BP
SAP30 binding protein
178.67
103.35
0.207
55.83

















SHORT


Genomic Variants on Human



UniGene
SAGE
LONG SAGE
Affymetrix
Genome Assembly Build 36



















cluster
CV
0's P
Mean
CV
0's P
Mean
CV
Variation
Cytogen
Locus ID







120
77.57
0.000
182.28
77.83
0.000
536.31
44.78
CopyNumber
1q25.1
177



142
78.94
0.036
83.00
75.28
0.000


CopyNumber
16p11.2
2900



202
113.47
0.000
199.28
96.07
0.111
419.21
51.49



429
82.18
0.000
551.21
81.48
0.000
865.18
43.60



695
90.92
0.000
118.87
85.62
0.111
1052.98
100.96
CopyNumber
21q22.3
3455



808
66.96
0.000
135.76
77.44
0.222
210.67
38.17



861
107.22
0.000
36.11
50.87
0.222
127.15
87.08
CopyNumber
16p11.2
2903



1063
67.18
0.036
100.31
75.40
0.222
194.60
33.14



1103
111.80
0.036
125.52
97.41
0.111
106.24
57.23



2430
80.01
0.071
47.30
88.89
0.222
218.15
32.90



2533
77.46
0.071
74.01
77.57
0.111
354.31
47.43



2795
95.03
0.000
259.59
82.14
0.111
2250.38
43.77



2853
63.43
0.036
186.93
60.34
0.111
926.32
22.95



3100
76.40
0.000
61.24
67.08
0.222
517.42
29.81



3254
78.32
0.036
113.88
73.94
0.111
211.49
31.45
Inversion
11p15.5
2202



3353
56.37
0.071
216.42
70.65
0.000
881.36
27.96



3416
131.08
0.036
68.67
112.87
0.222
360.44
151.18
CopyNumber
9p22.1
1912



3439
80.75
0.036
89.54
93.24
0.111
191.34
38.33



3530
72.15
0.036
108.31
56.32
0.000
136.00
30.88



3989
108.38
0.036
134.74
83.01
0.111
427.22
43.37



4055
135.83
0.000
441.94
118.93
0.111
64.49
38.32



4742
119.15
0.036
39.71
65.93
0.222
275.64
44.77
CopyNumber
8q24.3
1879



4747
73.50
0.071
71.07
73.04
0.111
307.46
47.47



4766
86.86
0.036
72.60
84.36
0.222
262.05
27.51



4859
103.29
0.071
110.40
111.52
0.000
299.38
40.44



4997
62.12
0.000
50.72
94.59
0.111
264.44
22.10



4998
63.22
0.036
28.78
51.61
0.222
229.36
56.84



5062
101.42
0.000
111.82
81.88
0.111
800.47
52.13
CopyNumber
15q24.3
2811



5086
72.25
0.036
53.42
73.36
0.222
135.70
28.77



5120
71.64
0.000
204.68
69.54
0.111
1158.59
29.63



5158
67.54
0.000
138.55
60.73
0.111
383.95
36.39



5245
74.90
0.000
80.69
73.69
0.000
219.54
21.60



5258
84.40
0.071
133.74
77.92
0.111
589.76
55.05



5268
78.70
0.000
46.25
73.83
0.111
113.40
37.54



5298
59.08
0.000
58.54
49.70
0.111
296.11
31.82



5308
83.81
0.000
479.50
73.38
0.000
2422.20
38.02



5324
64.23
0.000
62.22
66.74
0.111
694.81
25.69



5345
86.81
0.071
61.41
84.79
0.111
73.49
30.51
CopyNumber
2q37.3
515



5662
87.26
0.000
651.22
57.10
0.000
2861.36
36.28



5710
67.53
0.071
34.13
80.74
0.111
452.86
45.78



5719
94.26
0.000
65.99
56.36
0.000
55.53
45.18
CopyNumber
12p13.31
2368



5912
65.61
0.000
30.20
60.87
0.111
430.78
30.03



5947
68.42
0.036
34.91
59.37
0.222
368.59
33.28



6396
72.90
0.036
94.01
39.56
0.222
869.88
31.02



6454
77.38
0.000
290.31
91.04
0.000
504.85
40.25
CopyNumber
19p13.12
3223



6459
121.97
0.036
88.34
85.38
0.111
157.79
41.08
CopyNumber
8q24.3
1880



6551
102.10
0.000
99.28
83.28
0.000
515.56
45.37



6891
68.55
0.000
79.36
95.32
0.000
437.26
34.58



7101
85.77
0.071
81.04
84.26
0.000
183.19
27.20



7236
91.55
0.000
89.02
123.50
0.111
150.63
53.39
CopyNumber
19q13.33
3277



7476
85.55
0.000
91.48
67.53
0.000
1250.83
39.30



7527
92.63
0.036
52.36
54.01
0.222
97.43
36.93



7744
85.28
0.000
77.42
71.13
0.000
415.46
37.27
CopyNumber
11q13.1-
2278












11q13.2



7753
136.12
0.000
138.00
85.95
0.111
100.65
48.84
CopyNumber
7q32.1
1639



7768
65.21
0.000
63.80
65.95
0.111
269.17
27.39
CopyNumber
11q13.1
2276



7862
74.15
0.036
84.67
63.85
0.111



7910
72.05
0.036
78.63
65.90
0.111
153.70
42.23



7917
78.00
0.000
135.78
112.82
0.111
661.73
52.63
CopyNumber
3p22.1
572



8102
83.01
0.000
1410.01
75.01
0.000
4250.06
30.72



8372
108.88
0.000
146.74
79.82
0.111
788.19
32.34



8737
68.38
0.036
88.71
85.75
0.111
253.06
44.11



8752
57.76
0.071
52.10
62.17
0.222
102.13
32.76
CopyNumber
12q13.2
2429



8765
64.21
0.000
53.71
59.12
0.000
228.43
30.56



8859
111.07
0.036
53.33
94.17
0.222
234.96
73.37



8867
137.92
0.000
273.81
95.23
0.111
547.98
79.93



9003
69.05
0.000
66.15
65.61
0.000
148.11
36.69



9015
65.95
0.000
180.11
68.32
0.000



9043
67.83
0.000
38.48
97.33
0.111
162.00
25.78



9234
79.49
0.071
68.18
62.80
0.111
434.76
37.42



9235
92.25
0.000
67.77
88.26
0.222
256.46
58.39



9527
84.48
0.036
51.11
48.09
0.222
538.70
28.49



9534
72.74
0.000
86.28
73.16
0.222
626.14
29.63



9573
92.63
0.036
31.79
54.71
0.222
778.41
33.32



9589
61.30
0.036
71.77
49.75
0.111
919.32
26.81



9788
88.77
0.071
127.59
72.78
0.000
377.13
38.24



9825
66.79
0.000
56.23
48.85
0.111
365.07
28.07



9857
122.60
0.000
232.82
151.99
0.000
463.40
157.98



10326
73.58
0.000
197.00
75.36
0.000
369.97
68.55



10842
94.54
0.000
239.28
115.19
0.222
718.72
44.58



10848
67.53
0.071
31.76
66.74
0.111
104.71
37.33
CopyNumber
10q11.21
2093



11125
68.78
0.071
93.47
59.46
0.000
817.21
27.49



11184
59.84
0.036
115.93
46.13
0.000
292.68
27.77
CopyNumber
9p13.3
1937



11223
88.67
0.071
78.63
87.24
0.222
57.89
55.15



11355
104.32
0.036
66.99
75.00
0.222
62.56
35.20



11463
61.89
0.036
113.19
84.50
0.111
429.95
40.75



12013
64.76
0.036
45.75
69.36
0.222
99.02
32.35



12084
81.01
0.000
364.40
89.06
0.000
623.07
39.39
CopyNumber
16p11.2
2900



12102
67.05
0.071
114.17
52.22
0.111
518.73
22.82
CopyNumber
6q21
1407



12107
72.91
0.036
50.80
59.67
0.111
329.36
29.47



12109
61.69
0.036
46.73
59.25
0.111
118.79
29.00
CopyNumber
2q11.2
378



12144
73.94
0.071
41.87
82.28
0.222
162.21
31.04



12152
79.55
0.036
58.29
64.64
0.222
30.47
58.95



12272
64.89
0.071
48.28
64.28
0.111
236.82
29.21



12341
71.85
0.000
80.90
63.60
0.222
646.53
35.91



12457
60.75
0.036
41.32
44.32
0.222
141.28
35.86



12865
77.51
0.036
56.10
68.14
0.111
161.87
24.52



13662
73.45
0.071
42.54
82.56
0.111
286.77
29.53



14317
85.06
0.000
210.81
76.29
0.111
707.56
30.56
CopyNumber
15q14
2760



14333
93.92
0.000
49.69
65.95
0.222
52.91
32.36
CopyNumber
1p36.11
49



14745
67.71
0.036
34.86
68.85
0.222
344.17
44.46



14839
60.79
0.036
72.24
59.97
0.000
425.45
27.99
CopyNumber
11q12.3
2269



14846
71.11
0.036
35.42
56.40
0.111
290.22
58.28



14894
82.05
0.000
60.76
70.36
0.111
126.08
28.41



15277
127.86
0.000
94.06
82.10
0.111
147.72
37.89
CopyNumber
16p13.3
2866



15591
67.01
0.000
41.12
58.74
0.111
131.70
28.53
CopyNumber
7q22.1
1598



15738
72.04
0.000
129.69
48.46
0.111
417.14
23.56



16059
66.35
0.000
71.91
74.39
0.111
679.76
46.08



16130
62.56
0.036
43.34
61.70
0.222
18.64
94.29
CopyNumber
17q25.1
3075



16349
59.57
0.071
31.68
64.66
0.222
148.04
24.93
CopyNumber
16q23.2
2956



17118
62.14
0.071
46.03
69.29
0.111
213.73
40.31
CopyNumber
1p34.3
58



17250
79.64
0.071
117.82
78.92
0.111
294.70
33.94



17680
73.53
0.071
48.01
54.77
0.111
516.93
33.95
CopyNumber
6q24.2
1437



17731
70.13
0.000
29.51
60.36
0.111
520.71
54.10



17883
65.60
0.000
135.33
70.28
0.000
114.89
33.02



18069
90.49
0.036
63.83
85.91
0.111
211.65
49.02



18128
74.70
0.036
28.66
43.42
0.222
141.00
37.06
CopyNumber
20q11.22
3366



18349
74.07
0.036
49.61
83.49
0.222
300.87
45.97



19673
80.92
0.071
95.67
73.57
0.222
562.71
37.51
CopyNumber
8q24.3
1879



20013
65.84
0.000
62.25
52.78
0.000
173.94
35.93
CopyNumber
1p36.11
48



20107
96.88
0.036
39.46
139.41
0.222
175.52
41.33
CopyNumber
14q32.33
2746



20157
77.35
0.036
59.44
87.93
0.222
376.62
32.83



20521
94.01
0.000
152.96
89.93
0.111
383.24
40.81
CopyNumber
19q13.33
3277



20529
69.78
0.071
39.76
53.17
0.222
749.10
34.18
CopyNumber
1p36.32
11



20573
67.85
0.000
81.56
153.79
0.111
23.55
41.49



20716
71.00
0.036
66.00
55.65
0.222
276.11
36.03
CopyNumber
1q32.1
209



22393
64.62
0.036
63.67
82.21
0.222
228.15
33.72



22543
56.69
0.036
63.96
65.55
0.222
34.14
49.75



22546
71.92
0.036
42.45
98.37
0.222
651.22
63.93
CopyNumber
11q12.2
2266



22616
75.10
0.071
35.69
58.10
0.222
144.92
52.15
CopyNumber
17p13.3
2978



23033
58.71
0.071
39.15
53.57
0.222
341.82
43.42



23111
77.82
0.071
52.47
83.58
0.222
105.11
33.54
CopyNumber
19p13.13
3220



23978
66.48
0.036
58.25
63.84
0.222
128.24
28.55



24301
143.33
0.036
116.94
59.98
0.111
286.08
26.26
CopyNumber
19p13.3
3198



24379
89.22
0.000
90.75
71.03
0.000
479.98
29.85



24601
136.75
0.000
195.56
129.74
0.222
34.60
49.50
CopyNumber
22q13.31
3508



24950
186.79
0.071
189.81
135.70
0.222
307.39
104.91



25155
120.45
0.071
52.76
77.03
0.222
204.80
58.51



25450
206.58
0.036
103.43
106.19
0.222
124.80
61.30



25723
98.01
0.036
74.46
92.32
0.111
204.78
31.78



26010
107.96
0.036
71.92
87.71
0.111
127.90
44.05
CopyNumber
10p15.2-
2038












10p15.3



26023
71.18
0.036
27.14
63.42
0.222
32.41
34.48



26136
64.61
0.000
126.52
71.60
0.000
1187.97
29.30



26232
90.53
0.071
26.46
93.62
0.222
122.41
30.42



26403
79.12
0.036
49.19
87.28
0.222
49.29
121.55



26518
108.83
0.036
82.68
57.69
0.111
145.35
56.07
CopyNumber
11p15.5
2200



27222
70.07
0.036
92.82
77.94
0.111
408.36
36.92



28491
110.80
0.000
366.05
99.16
0.000
1987.13
39.05



28914
124.19
0.036
75.99
55.29
0.111
172.22
38.11
CopyNumber
16q24.3
2971



29203
106.14
0.000
45.04
65.31
0.111
60.43
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14q13.2



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217.18
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2097



522995
72.57
0.000
92.76
85.46
0.222
155.41
29.78



523004
91.74
0.000
1093.46
104.71
0.000
1020.96
39.57



523012
151.59
0.036
108.27
101.71
0.111
460.74
105.86



523054
58.03
0.000
85.81
56.99
0.111
215.84
28.86
CopyNumber
1p36.11
48



523131
64.37
0.036
54.95
87.13
0.000
176.91
27.06



523145
77.65
0.000
77.46
74.44
0.000
713.08
34.57



523215
72.87
0.000
87.19
71.68
0.111
515.77
29.73
CopyNumber
10q24.31
2164



523238
72.68
0.000
120.04
66.25
0.222
77.37
32.28



523262
70.08
0.036
131.35
69.97
0.000
1073.88
31.10



523299
84.00
0.071
94.08
72.86
0.222
94.93
27.98



523302
73.40
0.036
52.80
58.41
0.111
39.16
33.68



523560
81.28
0.000
971.82
62.39
0.000



523680
83.52
0.000
107.04
96.51
0.111
160.42
34.93



523789
160.56
0.000
399.15
138.88
0.000
126.46
81.17



523829
93.80
0.036
62.35
75.95
0.111
128.33
63.45



523836
118.62
0.000
551.15
91.25
0.000
692.25
64.89
CopyNumber
11q13.1-
2278












11q13.2



523852
122.32
0.000
140.78
82.29
0.222
223.69
123.19
CopyNumber
11q13.2-
2280












11q13.3



523875
85.23
0.036
67.45
82.01
0.222
138.28
32.54



524009
72.05
0.071
48.51
71.53
0.222
181.41
38.91



524081
79.74
0.036
25.40
66.56
0.222
131.07
30.87



524084
71.59
0.000
52.46
63.40
0.222
310.09
30.43



524161
56.55
0.071
58.04
46.88
0.000
158.34
33.48
CopyNumber
10p13
2062



524171
65.02
0.036
39.20
45.15
0.222



524183
99.77
0.036
250.38
82.32
0.111
259.10
66.52
CopyNumber
12p13.33
2363



524195
77.48
0.036
45.90
110.88
0.222
329.67
54.17



524214
65.06
0.000
93.97
80.62
0.111
429.42
38.04



524219
102.77
0.000
1283.75
138.72
0.000
1413.03
41.62



524271
101.04
0.000
72.07
117.41
0.111
303.87
28.52



524367
97.52
0.000
23.68
69.12
0.222
212.52
34.89



524395
160.71
0.071
629.43
152.46
0.111
691.04
113.98



524464
63.84
0.000
249.77
51.93
0.111
800.60
36.87



524502
63.30
0.036
38.16
53.21
0.222
35.02
67.39
CopyNumber
12q13.2
2429



524530
62.04
0.071
58.64
69.36
0.222
119.54
33.29



524590
62.24
0.071
32.90
59.64
0.222
168.27
24.98
CopyNumber
12q21.1
2454



524599
101.39
0.036
171.63
88.17
0.111
877.45
45.68



524690
157.16
0.071
37.45
91.05
0.222
129.11
25.70
CopyNumber
1p34.2
60



524788
66.86
0.071
46.71
77.38
0.222
152.65
26.13



524809
81.00
0.071
32.60
68.39
0.222
71.44
35.75



524899
64.26
0.000
95.67
74.61
0.222
638.70
30.17



524920
66.48
0.000
61.67
67.69
0.111
789.95
26.29



524969
65.49
0.000
50.51
61.47
0.222
159.56
35.37



525134
62.67
0.036
52.40
77.61
0.222
157.75
32.67



525163
68.79
0.036
118.15
66.40
0.000
209.09
38.04



525232
89.47
0.036
78.60
84.11
0.000
536.96
31.58



525238
93.87
0.000
59.16
67.35
0.111
602.44
37.66



525330
77.23
0.000
183.06
61.77
0.000
381.49
40.05



525391
59.57
0.036
42.13
65.68
0.222
156.20
32.83
CopyNumber
1p32.3
74



525527
71.43
0.071
100.14
58.46
0.111
184.06
29.23
CopyNumber
1p36.33-
4












1p36.32



525626
70.54
0.036
28.27
80.56
0.222
93.85
33.60
CopyNumber
14q32.33
2747



525899
90.18
0.000
114.54
61.10
0.222
197.83
28.39



526464
68.99
0.036
26.13
58.80
0.222
142.58
30.88
CopyNumber
15q24.1
2808



526521
96.01
0.000
250.88
101.74
0.000
147.15
33.86



527105
68.10
0.000
371.42
53.26
0.000
445.41
26.61



527193
66.74
0.000
1409.75
60.87
0.000
54.69
37.93



527348
68.02
0.071
31.17
107.14
0.111
156.88
41.93



527412
112.08
0.036
111.78
104.84
0.222
954.00
37.46



527861
75.05
0.000
174.55
93.72
0.000
778.13
44.76



527862
77.71
0.000
121.83
69.64
0.222


CopyNumber
16p13.3
2866



527980
93.19
0.000
140.08
80.91
0.111
72.21
28.28
CopyNumber
15q21.1
2774



528050
86.07
0.071
39.50
93.86
0.222
153.01
24.84



528222
71.25
0.000
56.92
67.43
0.222
297.99
38.18



528300
70.72
0.071
37.21
64.60
0.111
143.10
32.16
CopyNumber
10p15.2-
2038












10p15.3



528305
69.32
0.000
323.87
54.84
0.000
1767.97
27.06



528572
107.18
0.036
40.58
69.71
0.222
121.35
39.94
CopyNumber
8p21.3
1710



528668
82.67
0.000
640.96
72.93
0.000



528780
78.91
0.036
95.64
74.72
0.111
545.27
28.60



528803
63.96
0.000
69.19
61.88
0.222
637.49
39.09
Inversion
16p12.2-
2894












16p12.1



529059
86.70
0.000
155.84
79.33
0.000
436.61
43.10
CopyNumber
19p13.2
3216



529132
101.86
0.000
206.58
89.23
0.000
607.67
37.45



529244
79.26
0.036
48.81
59.97
0.222
299.18
31.69
CopyNumber
2q12.2
387



529280
59.84
0.036
42.59
87.27
0.222
122.27
29.28



529303
118.67
0.000
324.14
115.14
0.111
857.43
38.03



529369
89.29
0.000
25.26
76.50
0.111
9.01
69.95



529400
76.13
0.000
40.63
114.07
0.111
32.05
45.08



529420
107.73
0.000
106.80
48.77
0.000
56.41
37.58



529591
68.74
0.000
78.81
61.99
0.111
467.29
39.56



529618
87.09
0.036
82.62
91.59
0.111
36.01
56.84
CopyNumber
3q29
753











Inversion











CopyNumber



529631
74.72
0.000
620.31
56.60
0.000
176.79
30.79
CopyNumber
3q29
755



529782
58.53
0.000
130.67
66.49
0.000
146.41
27.77



529798
75.07
0.000
328.92
49.58
0.000
1755.52
30.60



529862
62.81
0.000
117.16
56.20
0.222



529890
63.76
0.000
331.32
41.79
0.000
3988.58
27.20
CopyNumber
5q35.3
1270



529892
108.94
0.036
139.13
107.43
0.222


CopyNumber
5q35.3
1271



529957
57.49
0.036
71.45
52.24
0.000
242.41
35.55



530096
68.28
0.000
137.92
57.16
0.111
422.18
29.43



530118
65.41
0.000
57.21
50.39
0.111
386.79
22.90



530291
94.65
0.000
62.14
78.23
0.000
77.23
37.30



530314
113.91
0.000
72.35
69.84
0.111
135.51
32.51
CopyNumber
9q34.3
2030



530331
79.95
0.071
96.65
72.31
0.111
393.16
48.43



530381
84.23
0.000
44.92
94.49
0.111
740.81
47.85



530412
108.42
0.000
884.31
121.35
0.000
755.69
25.73



530436
68.51
0.036
39.15
65.12
0.000
89.36
36.15



530479
68.09
0.071
50.16
67.87
0.222
130.74
30.76



530687
76.35
0.000
123.16
101.20
0.111
388.74
29.72
CopyNumber
11p15.5
2200



530734
78.25
0.036
43.82
67.00
0.222
203.80
36.73



530753
64.89
0.000
122.19
58.43
0.111
1049.37
27.21



530823
71.41
0.036
34.72
46.24
0.111
219.78
24.63



530862
76.97
0.071
24.06
57.79
0.111
216.03
27.91
CopyNumber
12q13.12
2421



531081
144.33
0.000
188.82
111.97
0.111
1778.83
73.47



531089
64.92
0.000
58.25
72.81
0.222
240.62
40.78



531176
69.91
0.036
192.02
57.22
0.111
407.01
25.65



531330
73.90
0.000
113.07
68.46
0.111
834.17
46.89
CopyNumber
9p24.3
1883



531614
75.55
0.071
84.93
89.38
0.111
260.94
66.65



531752
65.88
0.071
46.35
66.00
0.000
53.66
35.52



531856
113.19
0.000
567.60
102.77
0.000
10.32
101.76



531876
75.41
0.036
87.48
59.71
0.222
539.73
29.29



531879
73.81
0.071
33.40
53.04
0.111
88.51
36.03



532359
71.75
0.000
899.39
67.01
0.000
3112.89
40.25



532399
60.44
0.071
53.30
56.19
0.111
556.41
25.27



532755
59.70
0.071
35.53
57.88
0.222
174.78
35.47



532790
82.55
0.000
83.21
52.24
0.222
153.66
31.53



532793
105.70
0.036
160.69
81.87
0.111
299.76
37.08
CopyNumber
17q21.32
3031



532803
110.79
0.000
194.85
85.55
0.111
251.26
89.23



532826
124.52
0.036
436.04
83.52
0.000
55.92
39.14



532853
75.00
0.000
86.71
66.43
0.111
104.95
47.87



533030
90.84
0.036
91.99
90.93
0.111
235.53
30.97
CopyNumber
22q13.1
3496



533059
100.23
0.000
432.63
104.06
0.111
952.40
34.46
CopyNumber
6p21.33
1312



533122
60.64
0.071
124.04
67.72
0.000
610.09
26.23



533136
71.52
0.000
67.48
58.25
0.111
202.24
47.72
CopyNumber
4p16.2
761



533192
67.13
0.036
119.13
68.06
0.000
390.25
37.80



533222
60.55
0.071
36.87
44.13
0.111
164.72
28.30
CopyNumber
5q12.1
1137



533245
65.70
0.036
46.71
63.31
0.111
179.53
24.31
CopyNumber
5q31.1
1222



533282
56.67
0.000
183.69
77.18
0.000
1100.81
25.29



533308
68.45
0.036
48.77
64.22
0.222
202.26
24.39



533317
143.97
0.000
745.87
104.93
0.111
2393.96
70.88



533437
71.07
0.036
132.40
64.32
0.222



533440
143.68
0.036
45.51
61.68
0.222
235.54
58.67



533474
59.55
0.036
53.89
75.77
0.111
128.82
31.21



533479
69.59
0.036
96.22
76.98
0.111
86.44
31.09



533526
71.06
0.000
49.86
57.89
0.111
218.93
31.26



533624
70.85
0.000
959.57
58.54
0.000
1867.45
27.19



533712
65.23
0.036
55.59
73.88

259.05



533732
65.50
0.000
204.31
50.13
0.000
1297.83
21.87



533771
93.54
0.000
50.24
77.32
0.222
1094.17
25.43
CopyNumber
16p13.3
2866



533782
221.65
0.036
544.77
104.33
0.222
29.71
50.29



533977
109.58
0.071
160.18
105.13
0.111
1758.85
51.28
CopyNumber
1q21.1
147



533985
197.67
0.036
55.92
64.84
0.111
188.23
31.85



533986
68.64
0.036
24.58
130.07
0.222
179.95
28.58



534125
142.62
0.000
832.59
105.81
0.111
4813.26
38.31
CopyNumber
6p21.33
1313



534168
75.97
0.036
323.99
55.72
0.000
1011.41
45.93
CopyNumber
Xq24
3602



534212
77.33
0.000
43.32
66.35
0.222
99.62
33.06
CopyNumber
1q21.1
147



534255
96.87
0.000
2910.69
103.61
0.000
4736.90
32.54
CopyNumber
15q21.1
2773



534307
90.48
0.036
47.43
99.71



534314
85.64
0.000
902.22
82.80
0.000
123.06
45.02



534326
91.25
0.000
113.47
96.69
0.111
398.89
46.54



534338
66.09
0.036
78.26
71.00
0.222
158.13
58.47
CopyNumber
16p11.2
2903



534346
77.56
0.000
650.12
74.11
0.000



534350
71.06
0.071
29.73
56.39
0.222
141.64
41.82



534453
90.65
0.000
296.51
95.48
0.000
624.74
38.70



534456
130.28
0.000
192.47
72.01
0.000
88.66
32.89
CopyNumber
17q25.3
3087



534457
62.64
0.071
61.53
74.61
0.000
730.32
25.54



534473
63.86
0.071
93.62
63.87
0.222
453.91
46.23



534483
56.84
0.071
41.04
62.68
0.222
271.95
33.02



536275
69.43
0.071
36.99
76.62
0.222
305.46
30.60



541269
79.15
0.000
244.71
86.94
0.000



546248
137.05
0.036
819.47
122.30
0.000
277.158
66.77



546250
75.46
0.000
135.33
72.35
0.000
457.00
31.62



546253
79.22
0.036
154.37
88.05
0.222
80.29
33.55



546261
89.83
0.036
496.55
65.24
0.000
6040.82
27.54



546269
75.45
0.000
1517.81
42.29
0.000
14429.75
31.95



546271
65.78
0.000
386.41
50.39
0.000
1283.29
34.90



546286
89.05
0.000
1172.72
54.31
0.000
4362.29
39.28



546289
108.77
0.000
1051.06
67.54
0.000
4831.90
38.49



546290
94.06
0.000
2012.36
62.38
0.000
6697.93
38.63



546291
84.07
0.000
142.03
61.95
0.000
5073.35
34.62
CopyNumber
12p13.33-
2364












12p13.32



546339
64.42
0.000
67.76
55.24
0.111
535.27
24.30



546356
59.11
0.000
4388.69
51.21
0.000
6301.04
40.02
CopyNumber
19q13.33
3277



546394
111.80
0.000
185.13
58.61
0.000



547759
63.46
0.071
48.56
84.67
0.000



549178
82.90
0.000
82.93
55.18
0.111


CopyNumber
9q34.3
2030



552590
70.08
0.036
25.28
65.81
0.222


CopyNumber
22q11.21
3466



553496
72.62
0.071
41.08
79.89
0.222
43.50
72.79



553512
113.45
0.000
44.13
95.01
0.111



554767
64.47
0.071
35.90
65.85
0.222



554776
84.70
0.071
46.58
100.28
0.222


Inversion
17p11.2
2999



554894
87.26
0.071
45.88
73.07
0.222


CopyNumber
2p13.1
356



554896
89.43
0.000
112.49
60.07
0.000
291.19
31.70
CopyNumber
7p22.3
1481



555194
75.14
0.036
108.54
77.43
0.222



555866
100.49
0.000
206.53
89.92
0.000
185.01
47.68



555873
116.51
0.000
174.85
100.43
0.111



555875
78.46
0.036
17.73
91.10
0.222



555889
61.77
0.036
59.41
70.56
0.222



555890
64.41
0.000
151.98
72.68
0.111


CopyNumber
1p35.1
54



555911
83.61
0.000
120.74
64.55
0.000
182.74
32.39
CopyNumber
1q21.1
147



555969
85.57
0.036
27.90
60.28
0.222
187.95
28.62



555971
102.99
0.071
43.43
70.29
0.000



555973
61.02
0.071
25.39
54.32
0.222
365.86
37.66
CopyNumber
3p24.3
538



555994
67.15
0.071
17.47
70.28
0.222
113.88
43.85
CopyNumber
16q12.1
2912



556267
68.11
0.036
37.29
76.22
0.222



556461
109.80
0.000
89.26
94.15
0.111



556795
113.17
0.071
222.20
105.92
0.111



557550
90.20
0.000
781.42
91.24
0.000
2030.99
30.63



558296
65.84
0.000
71.76
64.47
0.222
293.40
20.63
CopyNumber
2p25.3
261



558313
83.46
0.000
103.84
61.28
0.111



558322
81.02
0.000
781.10
60.08
0.000



558325
58.04
0.071
105.00
59.17
0.000



558328
175.31
0.071
41.72
74.68
0.222
724.52
77.69
CopyNumber
6p21.31
1321



558330
119.70
0.000
1306.25
81.82
0.000


CopyNumber
19q13.33
3275



558338
94.69
0.000
392.75
84.14
0.111



558345
68.96
0.036
47.70
48.55
0.222



558354
85.28
0.000
3392.33
80.75
0.000



558360
85.52
0.000
198.33
51.08
0.111



558361
86.68
0.000
276.67
71.79
0.111



558362
74.08
0.036
45.59
64.87
0.222
229.35
49.45



558376
55.75
0.000
528.10
45.88
0.000



558381
127.10
0.000
52.20
90.63
0.000



558382
62.95
0.036
245.75
66.13
0.111



558383
92.57
0.000
850.60
69.48
0.111



558384
70.50
0.000
972.23
66.45
0.000


CopyNumber
17q12
3020



558385
76.67
0.000
522.14
55.82
0.111



558386
70.79
0.000
1008.37
63.71
0.000



558388
76.32
0.000
1561.96
59.50
0.000



558389
86.31
0.000
2526.25
46.00
0.000



558390
76.07
0.000
653.91
60.77
0.000



558391
71.38
0.000
1018.49
62.26
0.000



558396
101.60
0.071
177.30
89.88
0.222
187.47
100.01



558424
92.40
0.000
144.32
74.76
0.000



558426
67.09
0.036
90.90
62.22
0.111



558429
78.14
0.036
73.01
72.78
0.111


CopyNumber
7q22.1
1597



558431
100.68
0.000
155.33
60.37
0.000



558442
63.18
0.000
51.45
69.20
0.000



558448
67.59
0.000
46.04
58.56
0.111



558453
82.84
0.000
530.26
57.92
0.000



558454
75.98
0.000
112.20
87.34
0.111


CopyNumber
1p36.11
49



558458
67.67
0.071
35.79
63.61
0.111



558473
70.64
0.000
40.37
55.42
0.222
104.21
36.46
CopyNumber
18q12.2
3132



558499
78.66
0.071
43.18
52.43
0.222
69.81
63.34
CopyNumber
19p13.2
3210



558511
54.61
0.000
46.40
50.18
0.222



558521
78.28
0.000
61.92
65.33
0.111



558591
68.02
0.071
85.80
56.76
0.111
687.61
32.03



558825
107.55
0.000
42.12
72.58
0.000


CopyNumber
1q21.1
147



558995
53.36
0.000
186.71
64.24
0.111



567260
63.25
0.036
44.20
70.83
0.222
14.03
385.13
CopyNumber
16p11.2
2903



567263
62.05
0.000
93.74
61.88
0.222
27.38
49.92



567267
57.55
0.036
44.12
65.62
0.000
26.18
56.35



567279
65.02
0.036
43.97
59.48
0.111


CopyNumber
17q25.1
3074







Mean: mean gene expression level,



CV: coefficient of variation,



0's P: 0's proportion




text missing or illegible when filed indicates data missing or illegible when filed







Example 3: Identification of ERG

Among the candidate ERGs, reference genes were further identified according to the following process.


First. CVs were calculated for each UniGene cluster in the datasets including EST, ShortSAGE, LongSAGE and microarray (Affymetrix HG-U133, CA), and genes were preferentially ranked in ascending order of CV. Out of the 400 genes (approx. 20% of the candidate ERG) which were preferentially ranked in ascending order of CV from each dataset, 13 ERGs were found to be common to all four datasets (Table 3). The 13 ERGs were identified as Accession No. Hs 500775(ZNF207), Accession No. Hs 446427(OAZ1), Accession No. Hs 530118(LUC7L2), Accession No. Hs 208597(CTBP1), Accession No. Hs 440382(TRIM27), Accession No. Hs 444279(GPBP1), Accession No. Hs 250009(ARL8B), Accession No. Hs 9589(UBQLN1), Accession No. Hs 253726(PAPOLA), Accession No. Hs 146806(CUL1), Accession No. Hs 533222(DIMT1L), Accession No. Hs 494985(FBXW2) and Accession No. Hs 242458(SPG21).


The gene ontology thereof was determined from a Gene Ontology site (http://www.geneontology.org).


Most of the identified genes (ZNF207. OAZ1. CTBP1. PAPOLA, and FBXW2) were involved in basic cellular physiological processes, particularly in cellular metabolic processes. TRIM27 and CUL1 are genes responsible for cell proliferation. OAZ1 showed the lowest CV in both ShortSAGE and LongSAGE. CTBP1 and ZNF207 were the most stable genes in CGAP and Microarray, respectively. OAZ1, which is involved in polyamine biosynthesis, showed the highest expression across all four datasets, with relatively low CV in all datasets except for the EST dataset.


Experimental Example 4: Correlation Analysis of Reference Gene Between Dataset

Pearson and Spearman's rank correlation analyses were performed on the ERGs identified according to the present invention in a manner similar to that of Experimental Example 2 to compare the four datasets in terms of gene expression and CV.


Significant correlations between expression values were observed within some of the datasets, whereas no significant correlations of CV between any of the datasets were observed.


Although the Superman correlation between EST-microarray (0.374, P=0.206) and ShortSAGE-Microarray (0.511, P=0.076) was not significant, the gene expression of the 13 ERGs showed a significant Pearson correlation (p<0.01). No significant correlation in CV was found between the datasets (P>0.05). With the respective transcripts thereof found in all tissues in both ShortSAGE and LongSAGE, CDC42 and MYL6 were most stably expressed among the ERGs. HBP1 and PSMC1 showed the lowest CV in EST and Microarray.


Experimental Example 5: Comparison Between Novel Reference Gene and Traditional Reference Gene in Gene Expression Datasets

The 13 endogenous reference genes identified according to the present invention were compared with 13 traditional reference genes (Table 4) in terms of gene expression level and CV.


As a result, the six traditional endogenous reference genes. RPLP0, ACTB. PPIA. GAPD. PGK1 and B2M, showed high expression levels, while the other genes, GUSB, HPRT1, TBP, TFRC, ALAS1, H6PD and HMBS, exhibited relatively low expression levels, in all four datasets (FIG. 6). These results are in line with those of the previous repot, in which potential endogenous expression genes were analyzed for mRNA level using qRT-PCR (Radonic A et al., Biochem Biophys Res Commun. 313(4), 856-862, 2004). The expression levels of the endogenous reference genes identified according to the present invention were similar to or slightly higher than those of the low-abundance group of the traditional endogenous reference gems.


In addition, all of the endogenous reference genes identified according to the present invention, except for a few, showed lower CV values than traditional reference genes (FIG. 7). In other words, the endogenous reference genes of the present invention are generally low in expression variation across a wide range of tissues, indicating that the identified reference genes according to the present invention m more stably expressed than traditional endogenous reference genes.









TABLE 3





ERGs identified from four datasets


















UniGene
EST
SHORT SAGE
LONG SAGE


















cluster
Symbol
Gene Title
Mean
CV
0's P
Mean
CV
0's P
Mean
CV
0's P





Hs446427
GAZ1

text missing or illegible when filed  decarboxylate

673.62
62.31
0.069
376.38
53.94
0
444.92
41.91
0




antizyme 1


Hs95text missing or illegible when filed
UBQINI

text missing or illegible when filed  1

111.34
60.19
0.31
25.93
61.3
0.035
71.27
44.75
0.111


Hs444279
GPBP1
GC-rich text missing or illegible when filed
132.95
56.92
0.241
63.11
61.65
0
60.72
51.79
0.111




binding protein 1


Hs202597
CTEF1
C-terminal binding
236.74
48.53
0.338
213.99
82.01
0
112.96
50.6
0




protein 1


Hs251726
PAPOLA
Poly(A) polymerase
216.13
65.36
0.171
110.14
32.02
0
29.5
30.83
0




alpha


Hs230909
ARL2B
ADPtext missing or illegible when filed  factor
132.27
35.79
0.379
124.21
61.55
0
59.49
55.14
0.111




like 2B


Hs241455
SPG11
Spastic text missing or illegible when filed  21
120.33
39.44
0.31
36.41
57.83
0.636
73.3
49.12
0




(autosomal receive




Meat syndrome)


Hs530214
LUC7L2
LUC7-like 2 (S. cerevisiae)
131.76
39.55
0.172
74.65
65.41
0
57.21
59.39
0.111


Hs560773
ZNF267
Zinc finger protein 201
233.29
62.27
0.034
165.65
56.72
0
154.32
52.88
0.111


Hs333222
DBtext missing or illegible when filed
DNA dimethyltext missing or illegible when filed
129.17
69.34
0.379
42.11
60.55
0.071
36.87
44.13
0.111




(transferase 1-like S. cerevisiae)


Hs440322
TRI427
Tripartile text missing or illegible when filed
155.231
68.54
0.172
59.65
63.06
0
67.84
45.41
0.111




containing 27


Hs146866
CEL1
Culin1
126.27
37.3
0.205
69.33
65.76
0.036
76.43
55
0.111


Hs494985

text missing or illegible when filed


text missing or illegible when filed  and WD-40

97.45
62.65
0.379
46.27
56.47
0
23.34
53.61
0.111




domain protein 1














UniGene
Affymetrix
Gene Ontology













cluster
Mean
CV
Biological Process
Molecular Function







Hs446427
1360.0
22.07
Polytext missing or illegible when filed

text missing or illegible when filed  decarboxylase








initiator activity



Hs95text missing or illegible when filed
919.32
26.21


text missing or illegible when filed




Hs444279
746.56
26.6



Hs202597
481.81
24.72
Negative regulation of cell
Protein C4text missing or illegible when filed






proliferation Protein
binding Transcription






phosphorylation text missing or illegible when filed
factor binding







text missing or illegible when filed  replication




Hs251726
431.23
27.65
mRNA polytext missing or illegible when filed
RNA binding



Hs230909
416.24
26.51

text missing or illegible when filed

α-tubulin binding







β-tubulin binding GDP







binding GTP binding







GTPase activity



Hs241455
415.04
29.35
Antigen receptor-text missing or illegible when filed
CDtext missing or illegible when filed  binding






signalling pathway



Hs530214
326.79
22.9



Hs560773
358.69
18.38
Regulation of transcription
Transcription factor






DNA-dependent
activity zinc ion binding



Hs333222
161.22
28.3



Hs440322
163.6
26.3
Cell proliferation
Metal ion binding







text missing or illegible when filed

Transmembrane receptor







protein tyrosine kinase







activity



Hs146866
156.47
27.78
Cell cycle text missing or illegible when filed
Domain binding







text missing or illegible when filed  cell







cycle Induction of






apotext missing or illegible when filed  intracellular







text missing or illegible when filed  Negative







regulation of cell






proliferation



Hs494985
69.32
28.36

text missing or illegible when filed

Protein binding ubiquintin







context missing or illegible when filed  enzyme







activity, ubiquitin protein







lipase activity







Mean: Mean gene expression level,



CV: Coefficient of variation,



0's P: 0's proportion




text missing or illegible when filed indicates data missing or illegible when filed














TABLE 4





Traditional ERGs used in present invention

















UniGene
EST
SHORT SAGE















cluster
Symbol
Gene Title
Mean
CV
0's P
Mean
CV
0's P





Hs.448226
RPIP0
Riboclinical protein, large,
3,809.2
75.92
0
1,108.65
91.01
0




P0


Hs.520640
ACTB
β-actin
4,381.34
95.98
0.034
1,348.49
91.02
0


Hs.356331
PPIA
Peptidylprolyl-isomerase
1,225.7
78.02
0.034
1,646.83
59.53
0




A (cyclophilin A)


Hs.479728
GAPDH
Glyceraldehyde-3-
7,330.22
80.18
0
3,167.05
83.62
0




phosphate dehydrogenase


Hs.78771
PGK1
Phosphoglycerate kinase 1
681.19
86.72
0.034
423.67
85.52
0


Hs.534255
B2M
β-2-nucroglobulin
1,303.98
172.16
0
2,594.12
96.87
0


Hs.255230
GUSB
β-Glucurcoidase
116.77
89.37
0.414
40.98
67.81
0.407


Hs.412707
HPRT1
Hypoxanthine
103.48
63.18
0.345
32.51
63.51
0.407




phosphoriborytransferase 1


Hs.1100
TBP
TATA box binding
71.45
47.75
0.448
31.94
62.8
0.286




protein


Hs.529618
TFRC
Transferrin recepter
212.76
85.52
0.341
89.51
87.09
0.036




(p90, CD71)


Hs.82609
HMB8
Hydroxymethylbilane
176.26
105.68
0.172
32.51
76.51
0.214




synthase


Hs.463511
H6PD
Hexose-6-phosphate
101.9
86.9
0.483
44.65
70.8
0.071




dehydrogenase (glucose-




1-dehydrogenase)


Hs.476308
ALAS1
δ-Aminolevulinate
132.82
82.5
0.345
50.43
72.23
0




synthase 1














UniGene
LONG SAGE
Affymetrix














cluster
Mean
CV
0's P
Mean
CV







Hs.448226
1,605,76
74.12
0
1,888.46
41.47



Hs.520640
1,961.29
60.59
0.111
5,036.63
31.42



Hs.356331
1,683.27
56.79
0
5,223.43
28.46



Hs.479728
3,178.15
102.5
0
4,934.56
42.86



Hs.78771
445.96
90.9
0
1,179.63
41.05



Hs.534255
2,910.69
103.61
0
4,736.9
32.54



Hs.255230
11.42
89.36
0.556
360.37
49.14



Hs.412707
33.29
49.07
0.222
233.36
40.85



Hs.1100
17.58
69.22
0.444
25.44
73.23



Hs.529618
82.62
91.59
0.111
36.01
56.84



Hs.82609
28.04
43.5
0.444
119.08
33.63



Hs.463511
25.33
101.45
0.222
25.04
28.85



Hs.476308
22.6
50.59
0.202
178.95
107.93







Mean: Mean gene expression level,



CV: Coefficient of variation,



0's P: 0's proportion






Experimental Example 6: Gene Copy Number Variations of ERGs

The 13 ERGs identified according to the present invention were examined for gene copy number variation with reference to the Database of Genomic Variants (http//projects.tcag.ca/variation/). Only OAZ1 and DIMT1L, among the 13 genes of the present invention, were found in chromosome regions known to exhibit gene copy number variation (Table 5). In contrast, many (ACTB, GAPDH, PGK1, B2M. TBP. TFRC, ALAS1) of the traditional reference genes were located at such genomic loci (Table 5). These results suggest that almost all of the identified reference genes of the present invention, except for the two genes, can be used as guide genes for the measurement of gene amplification because they might be highly unlikely to show variation in gene copy number.


Experimental Example 7: Validation of Referee Gene

<7-1> Validation of Expression Level of ERG by Quantitative RT-PCR (qRT-PCR)


For use in validating the expression stability of the ERGs identified from the datasets, a total of 108 human samples, including 26 frozen human tissues, 60 formalin-fixed, paraffin embedded (FFPE) human tissues, and 22 human cancer cell lines were obtained (Table 6). The 60 FFPE tissues were composed of 10 breast cancer tissues, 8 normal stomach tissues, 9 stomach cancer tissues, 10 normal ovary tissues, 4 ovarian dropsy tissues, 9 borderline ovarian tumors, and 10 ovarian cancer tissues. Total RNA was isolated from these tissues and cell lines. For frozen human tissues and human cancer cell line samples. RNA which met the requirements of A26/280≥1.80 and rRNA (28S/18S)≥1.0 was used in qRT-PCR. cDNA was synthesized from the RNA using a standard technique and then diluted in distilled water (1:3 cDNA:DW) before qRT-PCR. PCR primers are summarized, together with the Universal Probe Library (UPL) thereof, in Table 7, below.


For use in this qRT-PCR, traditional ERGs were selected on the basis of the use frequency in previous repots and commercially available kits and the CV calculated from the database of the present invention. The 8 ERGs (B2M. ACTB. GAPDH, HMBS. PPIA. HPRT1, TBP and H6PD) that are most widely used can be found in commercially available kits such as Taqman human endogenous control plate (Applied Biosystems) and HKG selection kit (Roche Applied Science. Ohl F et, al., Mal Med 83:1014-24, 2005; Roche Applied Science Technical Note No. LC 15/2005; Applied Biosystems, 2001). Each gene was measured at 530 nm using an PAM-conjugate UPL probe (Roche Applied Science) or a custom-made specific probe (TIB MOLBIOL GmbH, Germany). All PCR was performed in a Lightcycler 2.0 (Roche Applied Science. USA) using standard protocols.


PCR efficiency for each gene was measured using a cDNA serial dilution (Pfaffl M W et al., Nucleic Acids Res 29: e45, 2001) of the stomach cancer cell line MKN74 and calculated with Lightcycler software 4.0 (Roche Applied Science, USA). It was found to fall within a range from 90 to 100% (Table 8).


Also, PCR efficiency for each probe in tissue samples was estimated using a LinRegPCR program (Ramakers C et al., Neurosci Lett 339:62-6, 2003). A Cp value is an average of three measurements for each gene. The same genes from different tissue samples were measured under the same PCR conditions so as to minimize experimental variation. Because it was not measured in any of 4 samples, normal lung, liver, breast and kidney tissues, the Cp value of H6PD was omitted from subsequent calculations. For each experiment that was conducted in triplicate, the Cp values were found to have a CV less than 5%.


Expression levels of 20 genes, except for H6PD, across 48 samples, including frozen human tissues and cancer cell lines, are depicted in FIG. 8. The 13 novel ERGs of the present invention were expressed in all 48 samples, 7 traditional ERGs showed a wide expression range (Cp: 13.52˜29.39) whereas H6PD was not found in some tissues. The 13 ERGs ranged in Cp from 18.90 to 28.79 (FIG. 9). Traditional ERGs can be classified into a high-expression group (median <20 cycles) and a low-expression group (median >23 cycles). B2M. PPIA. GAPDH and ACTB are included in the high-expression group and HPRT1, TBP, and HMBS are found in the low-expression group. All of the novel ERGs of the present invention, except for OAZ1, show expression levels between those of the high-expression group and the low-expression group of the traditional ERGs. ZNF2007 had the highest expression level among the ERGs, followed by UBQLN1 and CUL1. OAZ1 had the lowest expression level.









TABLE 5







Gene copy number variations of traditional ERG and novel ERG








Novel candidate ERGs
Traditional ERGs












Gene
Genomic
Genomic Variation**
Gene
Genomic
Genomic Variation**
















Symbol
location*
Variation type
Locus ID
References
symbol
location*
Variation type
Locus ID
References



















ZNF207
17q11.2



RPLP0
12q24.23





OAZ1
19p13.3
Copy number
3199
Wong et al (2007)
ACTB
7p22.1
Copy number
1487
Wong et al (2007)


LUC7L2
7q34



PP1A
7p13


CTBP1
4p16.3



GAPDH
12p13.31
Copy number
2368
Redon et al (2006)


TRIM27
6p22.1



PGK1
Xq21.1
Copy number
3567
Iafrate et al (2004)


GPBP1
5q11.2



B2M
15q21.1
Copy number
2773
Redon et al (2006)


UBQLN1
9q21.33



GUSB
7q11.21


ARL8B
3p26.1



HPRT1
Xq26.2


PAPOLA
14q32.2



TBP
6q27
Copy number
1479
Redon et al (2006)


CUL1
7q36.1



TFRC
3q29
Copy number
753
Iafrate et al (2004)


DIMTIL
5q12.1
Copy number
1137
Redon et al (2006)


Copy number

Redon et al (2006)


FBXW2
9q33.2



HMBS
11q23.3


SPG21
15q22.31



H6PD
1p36.22







ALAS1
3p21.2
Copy number
590
Wong et al (2007)





*Genomic location was searched from Ensembl (http://www.ensembl.org/index:html)


**Genomic variations were searched in the Database of Genomic Variants (http://projects.text missing or illegible when filed /variation/Human Genomic Assembly Build 36 (hg18))



text missing or illegible when filed indicates data missing or illegible when filed







<7-2 Validation of ERG Using Expression Stability Based on qRT-PCR Data


Gene expression stability was analyzed using geNorm v3.4 software (Vandesompele J et al., Genome Biol 3:RESEARCH034, 2002) and NormFinder software (Andersen C L et al., Cancer Res 64:5245-50, 2004). For geNorm and NormFinder analysis. Cp values were converted into relative expression levels in consideration of the PCR efficiencies of genes shown in Table 8 (GeNorm software manual, update on Sep. 6, 2004. //medgen.ugnet.be/˜jvdesomp/genorm/). Relative expression was calculated according to the following Mathematical Formula 4.





Relative Expression=(1+E)ΔCp  <Mathematical Formula 4>

    • ΔCp=Minimum Cp−Sample Cp;
    • Minimum Cp=lowest Cp value; and
    • E=PCR Efficiency


Correlation between the gone expression stability calculated with the geNorm or NormFinder program (M by geNorm, S by NormFinder) and the CV calculated in each dataset was analyzed with R analysis software (//www.R-project.org).


All of the genes were found to have M values (<0.9) lower than the default limit, 1.5, of geNorm, with high expression stability, as analyzed using the geNorm program (Table 9). Lower M values for mean expression stability mean more stable expression. GPBP1 and CUL1 were observed to show the most stable expression. Among the genes analyzed, B2M is the lowest stable expression gene, with the highest M value of 0.888, followed by ACTB (M=0.843). HMBS (M=0.815) and GAPDH (M=0.793) in descending order of expression instability.


When using the NormFinder program. TBP and PAPOLA were ranked as the top two in terms of expression stability (Table 9). Consistent with the geNorm result, B2M. ACTB, GAPDH. HMBS and HPRT1 were found to be less stable in expression level than the novel ERGs of the present invention. Both programs demonstrated that most of the novel ERGs identified according to the present invention show more stable expression levels than do traditional ERGs. Further, when analyzed for gene expression stability using a LinRegPCR program on the basis of the relative expression calculated with PCR efficiency, most novel ERGs were found to maintain higher expression stability than traditional ERGs.


There is no significant correlation between the M values calculated with geNorm and the CV values in Microarray and LongSAGE (p>0.05), whereas significance was found in correlation between M values and CV values in EST (Pearson correlation coefficient: 0.676, p=0.001) and ShortSAGE (Pearson correlation coefficient 0.659, p=0.002). Likewise, as for the Stability values (S), calculated with NormFinder, significant correlation was found in EST, ShortSAGE and LongSAGE, but not in microarray. Both the M and the S values showed higher agreement with CV in EST and ShortSAGE than in Affymetrix (Table 10).


Furthermore, the 13 novel ERGs were analyzed for expression in 60 FFPE samples using qRT-PCR in order to examine the possibility of applying them to the tissues in which high RNA degradation occurs. All of the genes, except for DIMT1L, were found to be expressed in all 60 samples. Cp was observed to range from 18.85 to 33.02 for traditional ERGs and from 23.33 to 31.38 for the novel ERGs (FIG. 9). Because of the lack of amplification in 5 samples. DIMT1L was omitted from subsequent stability analyses. Despite difference in the type of samples used in the experiments, almost all genes, except for several genes, were observed to be expressed in a pattern similar to that observed in the previous 48 samples. These results indicate that the novel ERGs of the present invention can be applied to gene expression in FFPE samples, geNorm and NormFinder analyses demonstrate that most of the novel ERGs are more stably expressed with lower Cp values in FFPE samples, as well as in the 48 samples, than are traditional ERGs (Table









TABLE 6







Human tissues and cancer cell lines used in Real time-PCR















Normal





Tissue or

(N)/







Tumor




No.
cell lines
Type
(T)
Diagnosis
Remarks















1
Adrenal
frozen
N
Normal




gland
tissue





2
Brain
frozen
N
Normal





tissue





3
Breast
frozen
N
Normal





tissue





4
Colon
frozen
N
Normal
Normal tissue




tissue


adjacent to







signet ring cell







carcinoma,







ascending colon


5
Esophagus
frozen
N
Normal





tissue





6
Kidney
frozen
N
Normal





tissue





7
Liver
frozen
N
Normal





tissue





8
Lung
frozen
N
Normal





tissue





9
Omentum
frozen
N
Normal





tissue





10
Ovary
frozen
N
Normal





tissue





11
Placenta
frozen
N
Normal





tissue





12
Placenta
frozen
N
Normal
Immature




tissue


placenta with







focal







intervillous







calcification,







normal two







umbilical







arteries







and one vein,







and no-evidence







of







chorioamnionitis


13
Rectum
frozen
N
Normal





tissue





14
Salivary
frozen
N
Normal




gland
tissue





15
Thyroid
frozen
N
Normal




gland
tissue





16
Tonsil
frozen
N
Normal





tissue





17
Uterus
frozen
N
Normal





tissue





18
Vein
frozen
N
Normal





tissue





19
Vulva
frozen
N
Normal





tissue





20
Brain
frozen
T
Glioblastoma





tissue

multiforme



21
Breast
frozen
T
Invasive ductal





tissue

carcinoma,







uppe rcentral



22
Transverse
frozen
T
Ulcerofungating




colon
tissue

carcinoma







transverse colon,







Mucinous







adenocarcinoma



23
Lung
frozen
T
Pleomorphic





tissue

carcinoma



24
Ovary
frozen
T
Transitional cell





tissue

carcinoma,







bilateral ovaries



25
Rectum
frozen
T
Adenocarcinoma,





tissue

moderately







differentiated







with mucin







production



26
Stomach
frozen
T
Advanced gastric





tissue

carcinoma,







Tubular







adenocarcinoma,







M/D



27
HL-60
cell lines
T
Leukemia
Blood


28
MDA-
cell lines
T
Breast cancer
Breast



MB-231






29
C33A
cell lines
T
Cervical cancer
Cervix


30
HeLa
cell lines
T
Cervical cancer
Lung


31
HCC-44
cell lines
T
Lung cancer



32
A549
cell lines
T
Lung cancer



33
Caov3
cell lines
T
Ovarian cancer
Ovary


34
OV-90
cell lines
T
Ovarian cancer



35
OVCAR3
cell lines
T
Ovarian cancer



36
SK-OV3
cell lines
T
Ovarian cancer



37
SNU119
cell lines
T
Ovarian cancer



38
LSW626
cell lines
T
Ovarian cancer



39
AGS
cell lines
T
Gastric cancer
Stomach


40
Kato III
cell lines
T
Gastric cancer



41
MKN1
cell lines
T
Gastric cancer



42
MKN74
cell lines
T
Gastric cancer



43
NCI-N87
cell lines
T
Gastric cancer



44
SNU5
cell lines
T
Gastric cancer



45
SNU16
cell lines
T
Gastric cancer



46
SNU484
cell lines
T
Gastric cancer



47
SNU601
cell lines
T
Gastric cancer



48
SNU638
cell lines
T
Gastric cancer





*: Normal tissue adjacent to signet ring cell carcinoma, ascending colon; and


**: immature placenta with focal intervillous calcifications, normal two umbilical arteries and one vein, and no evidence of chorioamnionitis.













TABLE 7







Primers and Taqman Probes for Real-Time PCR










Gene
UPL
Primers
Product











Names
No.
Sense Primers
Anti-Sense Primers
(bp)





GAPDH
60
SEQ ID NO. 1:
SEQ ID NO. 2:
 66




agccacatgctcagaca
gccaatacgaccaaatcc






ACTB
64
SEQ ID NO. 3:
SEQ ID NO. 4:
 97




ccaaccgcgagaagatga
ccagaggcgtacagggatag






B2M
42
SEQ ID NO. 5:
SEQ ID NO. 6:
 86




ttctggcctggaggctatc
tcaggaaatttgactttccattc






PPIA
#
SEQ ID NO. 7:
SEQ ID NO. 8:
326




catctgcactgccaagactgag
tgcaatccagctaggcatg






HPRT1
73
SEQ ID NO. 9:
SEQ ID NO. 10:
102




tgaccttgatttattttgcatacc
cgagcaagacgttcagtcct






HBMS
26
SEQ ID NO. 11:
SEQ ID NO. 12:
 92




tgtggtgggaaccagctc
tgttgaggtttccccgaat






TBP
 3
SEQ ID NO. 13:
SEQ ID NO. 14:
 60




gctggcccatagtgatcttt
cttcacacgccaagaaacagt






H6PD
89
SEQ ID NO. 15:
SEQ ID NO. 16:
 74




tggagatcatcatgaaagagacc
gcgaatgacaccgtactcct






ZNF207
27
SEQ ID NO. 17:
SEQ ID NO. 18:
 65




ctgtttcctagcacagcacaa
ggtttgaaatctgtaccaacagg






OAZ1
74
SEQ ID NO. 19:
SEQ ID NO. 20:
 67




caccatgccgctcctaag
gagggagaccctggaactct






LUC7L2
85
SEQ ID NO. 21:
SEQ ID NO. 22:
 60




cgatcacacagcaagaatcc
agatcgatgtctgcgatgc






CTBP1
77
SEQ ID NO. 23:
SEQ ID NO. 24:
 86




actgcgtgaccctgcact
gccccttgtctcatctgc






TRIM27
 7
SEQ ID NO. 25:
SEQ ID NO. 26:
 71




caggcacgagctgaactct
agctgctcaaactcccaaac






GPBP1
 4
SEQ ID NO. 27:
SEQ ID NO. 28:
 75




tcacttgaggcagaacacaga
agcacatgtttcatcattttcac






UBQLN1
73
SEQ ID NO. 29:
SEQ ID NO. 30:
 92




gaatcctgaccttgctgcac
ttgggagctgttgtctcattt






ARL8B
82
SEQ ID NO. 31:
SEQ ID NO. 32:
 66




aagcatgtgggagcggtat
cgatctgcagcatctatcatgt






PAPOLA
78
SEQ ID NO. 33:
SEQ ID NO. 34:
 91




gctacgaagaccagtccattg
tgttggtcacagatgctgct






CUL1
65
SEQ ID NO. 35:
SEQ ID NO. 36:
 86




gcgaggtcctcactcagc
ttctttctcaattagaatgtcaatgc






DIMT1L
77
SEQ ID NO. 37:
SEQ ID NO. 38:
 75




tccagtgttgtaaggatagaacctaag
Ccttactagaccatcccattcct






FBXW2
 3
SEQ ID NO. 39:
SEQ ID NO. 40:
111




cggctctgcagacttcact
ttgcacttctgcaaaactacct






SPG21
21
SEQ ID NO. 41:
SEQ ID NO. 42:
 88




gatgtctttttccggcagat
cgagatggtcccaataaactg

















TABLE 8







PCR Efficiency of Genes











UPL Probe
PCR Efficiency
PCR Efficiency


Gene Name
Nos.
(Diluted)*
(LinRegPCR)**













GAPDH
60
1.899
1.735 ± 0.048(137)


ACTB
64
2.038
1.491 ± 0.034(137)


B2M
42
1.868
1.717 ± 0.068(140)


PPIA
#
1.877
1.773 ± 0.058(142)


HPRT1
73
1.800
1.771 ± 0.024(143)


HMBS
26
1.954
1.431 ± 0.031(143)


TBP
3
1.826
1.447 ± 0.038(142)


H6PD
89
1.874
1.832 ± 0.026(64) 


ZNF207
27
1.869
1.648 ± 0.018(142)


OAZ1
74
2.068
1.498 ± 0.059(142)


LUC7L2
85
1.829
1.709 ± 0.047(143)


CTBP1
77
2.064
1.651 ± 0.055(141)


TRIM27
7
1.908
1.693 ± 0.034(143)


GPBP1
4
1.844
1.715 ± 0.031(141)


UBQLN1
73
1.864
1.723 ± 0.027(143)


ARL8B
82
1.838
1.499 ± 0.074(139)


PAPOLA
78
1.830
1.509 ± 0.032(141)


CUL1
65
1.810
1.695 ± 0.027(139)


DIMT1L
77
1.906
1.655 ± 0.037(141)


FBXW2
3
1.891
1.638 ± 0.02(142) 


SPG21
21
1.826
1.636 ± 0.021(142)





*PCR Efficiency; calculated with Roche Lightcycler software 4.0 using serial diluted cDNA of MKN 74 stomach cancer cell line;


**PCR Efficiency; calculated with LinRegPCR(Ramakers et. al., Neurosci Lett 339(1):62-66, 2003); and,


#: F-ttcttgctggtcttgccatTcctgga-p;


T: TAMRA-labeled;


F: FAM-labeled;


P: phosphate.













TABLE 9







Expression Stability of Novel and Traditional ERGs Calculated


by geNorm and NormFinder based on Real-Time PCR Data








48 Samples
60 FFPE Samples*










GeNorm
NormFinder
GeNorm
NormFinder














Genes
M
Genes
S
Genes
M
Genes
S

















GPBP1
0.496
TBP
0.276
GPBP1
0.409
ARL8B
0.233


CUL1

PAPOLA
0.280
PAPOLA

LUC7L2
0.235


PAPOLA
0.536
CUL1
0.287
ARL8B
0.437
OAZ1
0.247


TBP
0.548
LUC7L2
0.290
CTBP1
0.454
CTBP1
0.251


LUC7L2
0.565
CTBP1
0.312
LUC7L2
0.483
UBQLN1
0.273


TRIM27
0.585
GPBP1
0.317
SPG21
0.509
SPG21
0.280


FBXW2
0.597
TRIM27
0.317
FBXW2
0.528
FBXW2
0.286


CTBP1
0.608
FBXW2
0.329
OAZ1
0.545
PAPOLA
0.290


UBQLN1
0.623
DIMT1L
0.364
UBQLN1
0.555
TRIM27
0.327


DIMT1L
0.637
PPIA
0.383
TRIM27
0.567
GPBP1
0.345


PPIA
0.661
UBQLN
10.398
TBP
0.580
HPRT1
0.368


OAZ1
0.682
OAZ1
0.438
CUL1
0.593
CUL1
0.383


ZNF207
0.709
ARL8B
0.494
HPRT1
0.609
TBP
0.402


ARL8B
0.731
SPG21
0.502
ZNF207
0.625
HMBS
0.407


SPG21
0.749
ZNF207
0.502
HMBS
0.641
ZNF207
0.440


HPRT1
0.770
HPRT1
0.516
GAPDH
0.668
PPIA
0.461


GAPDH
0.793
HMBS
0.587
PPIA
0.692
GAPDH
0.527


HMBS
0.815
GAPDH
0.591
B2M
0.715
B2M
0.530


ACTB
0.843
ACTB
0.618
ACTB
0.737
ACTB
0.541


B2M
0.888
B2M
0.815





*DIMT1L was excluded from the analysis.


M: mean expression stability calculated with geNorm program;


S: Stability calculated with NormFinder program.













TABLE 10







Correlation between CV in each dataset and expression stability calculated with geNorm and NormFinder

















EST-M
EST-S
Short SAGE-M
Short SAGE-S
Long SAGE-M
Long SAGE-S
Affy-M
Affy-S
M-S




















Pearson
0.676
0.792
0.659
0.75
0.427
0.561
0.039
0.017
0.953


P value
0.001
<0.001
0.002
<0.001
0.061
0.01
0.869
0.944
<0.001


Spearman
0.589
0.605
0.277
0.268
0.092
0.105
0.424
0.357
0.955


P value
0.006
0.005
0.237
0.254
0.701
0.661
0.063
0.123
<0.001


Pearson
0.623
0.626
0.656
0.737
0.481
0.672
0.243
0.335
0.852


P value
0.004
0.004
0.002
<0.001
0.037
0.002
0.317
0.161
<0.001


Spearman
0.653
0.596
0.515
0.502
0.374
0.567
0.521
0.583
0.841


P value
0.002
0.008
0.024
0.03
0.115
0.013
0.022
0.009
<0.001





M: Mean expression stability calculated with geNorm;


S: Stability calculated with NormFinder













TABLE 11







List of 567 Samples Including 13 Tissues in HG-U133 Array













Nos. of


Tissues
Categories
Morphology
Samples














Brain
Benign
Meningioma
7
23



Malignant
Glioblastoma Multiforme
7





Oligodendroglioma
6





Medulloblastoma
3



Breast
Normal
Normal Tissue
18
74



Malignant
Infiltrating Duct Carcionma
36





Infiltrating Duct and Lobular Carcinoma
7





Infiltrating Lobular Carcinoma
13



Colon
Normal
Normal Tissue
22
62



Malignant
Adenocarcinoma
33





Mucinous Adenocarcinoma
7



Esophagus
Normal
Normal Tissue
11
17



Malignant
Adenocarcinoma
6



Kidney
Normal
Normal Tissue
26
51



Benign
Oncocytoma
5




Malignant
Clear Cell Adenocarcinoma
6





Renal Cell Carcinoma
14



Liver
Normal
Normal Tissue
10
29



Malignant
Hepatocellular Carcinoma
19



Lung
Normal
Normal Tissue
26
58



Malignant
Adenocarcinoma
15





Squamous Cell Carcinoma
17



Lymph
Normal
Normal Tissue
4
23


Node
Malignant
Hodgkin's Disease
4





Malignant Lymphoma
15



Ovary
Normal
Normal Tissue
10
50



Malignant
Adenocarcinoma
5





Clear Cell Adenocarcinoma
6





Mucinous Cystadenocarcinoma
5





Serous Cystadenocarcinoma
6





Papillary Serous Adenocarcinoma
18



Pancreas
Normal
Normal Tissue
13
41



Malignant
Adenocarcinoma
28



Prostate
Normal
Normal Tissue
14
41



Malignant
Adenocarcinoma
27



Rectum
Normal
Normal Tissue
17
38



Malignant
Adenocarcinoma
21



Stomach
Normal
Normal Tissue
17
60



Malignant
Adenocarcinoma
37





Signet Ring Cell Carcinoma
6



Total


567








Claims
  • 1.-2. (canceled)
  • 3. A method for selecting endogenous reference gene OAZ1 expressed in a formaline-fixed paraffin embedded (FFPE) tissue sample of human breast cancer tissues comprising: 1) selecting candidate endogenous reference gene by a method comprising (a) computing expression levels of genes from expressed sequence tag (EST), serial analysis of gene expression (SAGE) and microarray datasets, and (b) identifying constitutively expressed genes from more than one tissue type based on the computed gene expression level of step (a) and zero(0)'s proportions thereof;2) determining the coefficient of variation (CV) for the candidate endogenous reference gene of step 1); and3) ranking the candidate endogenous gene in an ascending order of CV of step 2.
  • 4. The method according to the claim 3, wherein the endogenous reference gene OAZ1 can be used to normalize expression levels for relative quantification of gene expression between different samples.
  • 5. The method according to the claim 3, wherein the coefficient of variation (CV) becomes larger as the gene expression increasingly varies from one tissue to another.
Priority Claims (1)
Number Date Country Kind
10-2006-0134883 Dec 2006 KR national
RELATED APPLICATION

This application is a continuation of U.S. application Ser. No. 13/631,279 filed on Sep. 28, 2012 and U.S. application Ser. No. 12/521,498, filed on Jun. 26, 2009, which is the U.S. national phase pursuant to 35 U.S.C. 371, of PCT international application Set. No. PCT/KR20071006890, filed Dec. 27, 2007, designating the United States and published in English on Jul. 3, 2008 as publication WO 2008/078969 A1, which claims priority to Korean application Set. No. 10-2006-0134883, filed Dec. 27, 2006. The entire contents of the aforementioned patent applications are incorporated herein by this reference.

Continuations (3)
Number Date Country
Parent 15582330 Apr 2017 US
Child 16129206 US
Parent 13631279 Sep 2012 US
Child 15582330 US
Parent 12521498 Jun 2009 US
Child 13631279 US