Detecting Low Frequency Variants

Information

  • Research Project
  • 8252248
  • ApplicationId
    8252248
  • Core Project Number
    R43HG006223
  • Full Project Number
    1R43HG006223-01A1
  • Serial Number
    006223
  • FOA Number
    PA-11-096
  • Sub Project Id
  • Project Start Date
    5/15/2012 - 12 years ago
  • Project End Date
    4/30/2014 - 10 years ago
  • Program Officer Name
    BROOKS, LISA
  • Budget Start Date
    5/15/2012 - 12 years ago
  • Budget End Date
    4/30/2014 - 10 years ago
  • Fiscal Year
    2012
  • Support Year
    01
  • Suffix
    A1
  • Award Notice Date
    5/14/2012 - 12 years ago

Detecting Low Frequency Variants

DESCRIPTION (provided by applicant): The ability to detect rare mutations in a population of sequences is enabling for a wide range of molecular studies that relate shifts in genotype and phenotype to selective pressures. Although recent technologies have enabled the analysis of entire genomes for common variation, it is still very challenging to detect rare variants in a sample. This proposal aims to develop a new approach to detect rare genetic variants using next- generation sequencing. Our approach has implications for the development of diagnostic and theranostic tests, and the development of novel drugs to treat infectious diseases and cancer. PUBLIC HEALTH RELEVANCE: There are over 200 diseases that are caused by mutations in the mitochondrial genome. Many of these mutations occur at a low frequency and are difficult to detect. By developing a powerful new method to detect rare variants, we aim to address an important unmet medical need.

IC Name
NATIONAL HUMAN GENOME RESEARCH INSTITUTE
  • Activity
    R43
  • Administering IC
    HG
  • Application Type
    1
  • Direct Cost Amount
  • Indirect Cost Amount
  • Total Cost
    233691
  • Sub Project Total Cost
  • ARRA Funded
    False
  • CFDA Code
    172
  • Ed Inst. Type
  • Funding ICs
    NHGRI:233691\
  • Funding Mechanism
    SBIR-STTR RPGs
  • Study Section
    ZRG1
  • Study Section Name
    Special Emphasis Panel
  • Organization Name
    PROGNOSYS BIOSCIENCES, INC.
  • Organization Department
  • Organization DUNS
    170943737
  • Organization City
    SAN DIEGO
  • Organization State
    CA
  • Organization Country
    UNITED STATES
  • Organization Zip Code
    921211213
  • Organization District
    UNITED STATES