This invention relates to devices, methods, systems, and compositions used to detect the presence of xanthan gum, quantify the presence of xanthan gum, or both, particularly in petroleum production operations.
Xanthan gum is an exocellular biopolymer secreted by Xanthomonas sp. It is a heteropolysaccharide with a primary structure of repeated pentasaccharide units formed by two glucose units, two mannose units, and one glucuronic acid unit. The main chain consists of β-D-glucose units linked at the 1 and 4 positions. The side chain is a trisaccharide, consisting of α-D-mannose that contains an acetyl group, β-D-glucuronic acid, and a β-D-mannose terminal unit, linked to a pyruvate group. The molecular weight distribution can range from 2×106 Da to 20×106 Da, depending on the association between polysaccharide chains (e.g., aggregates of several individual chains) and variations in fermentation conditions.
Provided in this disclosure is a xanthan gum detecting system that includes a polypeptide bound to a fluorescent probe, such that the fluorescent probe is released from the polypeptide when the polypeptide contacts xanthan gum.
In some embodiments, the system further includes a light source adapted to provide a wavelength of light that excites the fluorescent probe.
In some embodiments, the fluorescent probe fluoresces when it is released from the polypeptide and the detecting system is configured to detect the presence of xanthan gum in response to an increase in fluorescence. In some embodiments, the fluorescent probe fluoresces when it is bound to the polypeptide and the detecting system is configured to detect the presence of xanthan gum in response to a decrease in fluorescence.
The system can further include a detector for detecting a wavelength of light emitted from the fluorescent probe when the fluorescent probe is excited.
The fluorescent probe can be covalently bound to the enzyme. In some embodiments, the fluorescent probe is a fluorescent carbon nanotube. In some embodiments, the fluorescent probe is a fluorophore. In some embodiments, the fluorophore is Cy®3, Cy®5, methyl blue, methylene blue, or 8-anilinonaphthalene-1-sulfonic acid.
In some embodiments, the polypeptide is an enzyme. In certain embodiments, the polypeptide is β-glucanohydrolase I or β-glucanohydrolase II.
Also provided in this disclosure is a polypeptide bound to a fluorescent probe for the detection of xanthan gum.
In some embodiments, the polypeptide is an enzyme. In certain embodiments, the polypeptide is β-glucanohydrolase I or β-glucanohydrolase II.
In some embodiments, the fluorescent probe includes a fluorescent carbon nanotube. In some embodiments, the fluorescent probe includes a fluorophore. Suitable fluorophores 8-anilinonaphthalene-1-sulfonic acid, Cy®3, Cy®5, methyl blue, and methylene blue, or a combination thereof.
Also provided in this disclosure is a device for the detection of xanthan gum. The device includes a sensing region that includes a polypeptide bound to one or more fluorescent probes; a light source adapted to direct light to the sensing region, the light source adapted to provide a wavelength of light that excites the fluorescent probe; and a detector for detecting fluorescence emitted from the fluorescent probe when it is excited by the light source.
In some embodiments, the fluorescent probe is covalently bound to the polypeptide. In some embodiments, the fluorescent probe is non-covalently bound to the polypeptide. In certain embodiments, the fluorescent probe is a fluorescent carbon nanotube or a fluorophore. Suitable fluorophores include Cy®3, Cy®5, methyl blue, methylene blue, and 8-anilinonaphthalene-1-sulfonic acid.
Also provided herein is a method for detecting xanthan gum in a subterranean formation. The method includes placing a polypeptide bound to a fluorescent probe into the subterranean formation; directing light into the subterranean formation, wherein at least a portion of the light is at a wavelength that excites the fluorescent probe; and assessing an intensity of light emitted from the fluorescent probe, where a non-zero intensity of light emitted from the fluorescent probe indicates the presence of xanthan gum. In some embodiments, the method further includes quantifying an amount or concentration of xanthan gum based on an intensity of the light emitted from the fluorescent probe.
In some embodiments, the polypeptide is β-glucanohydrolase I or β-glucanohydrolase II, and the fluorophore is a fluorescent carbon nanotube, Cy®3, Cy®5, methyl blue, methylene blue, or 8-anilinonaphthalene-1-sulfonic acid (ANS).
Advantages of the disclosed systems and methods include specificity for xanthan gum, accuracy exceeding that of methods seeking to establish a relationship between concentration and viscosity of xanthan-containing fluids, and results independent of impurities that may be present.
Devices, systems, methods, and compositions are provided herein for the detection of xanthan gum. The xanthan gum is typically dispersed in a fluid, such as an aqueous-based fluid. In some cases, devices, systems, methods, and compositions provided herein can be used for the detection of an analyte other than xanthan gum. Devices, systems, methods, and compositions provided herein can use a polypeptide (such as an enzyme) that is bound to fluorescent probe (such as a fluorophore) for the detection of an analyte (such as xanthan gum). In one embodiment, a fluorescent probe is released from a polypeptide when the polypeptide comes into contact with an analyte. Cleavage of the fluorescent probe from the polypeptide can cause a change in the fluorescent characteristics of the fluorescent probe such that the detection of, or a change in, fluorescence is indicative of the presence of the analyte. Cleavage of the fluorescent probe from the polypeptide can cause a change in the fluorescent characteristics of the fluorescent probe such that the detection of, or a change in, fluorescence can also be used to quantify the amount or concentration of the analyte.
In one example of the process depicted in
In some embodiments, an operation in process 200 is omitted. In one example, the tagged polypeptides are obtained prior to implementation of process 200. In some embodiments, process 200 includes operations not shown in
Provided in this disclosure is a xanthan gum detecting system that includes a polypeptide bound to a fluorescent probe such that the fluorescent probe is released from the polypeptide when the polypeptide interacts with xanthan gum.
In one example, the polypeptide is an enzyme that catalyzes the hydrolysis of xanthan gum and the fluorescent probe is released from the polypeptide when the enzyme catalyzes the hydrolysis of xanthan gum. In some embodiments, the enzyme is β-glucosidase, β-mannosidase, or α-mannosidase. In some embodiments, the enzyme is hydrolase such as β-glucanohydrolase I or β-glucanohydrolase II.
In some embodiments, the fluorescent probe is covalently bound to the polypeptide. In certain embodiments, the fluorescent probe is bound to the polypeptide through a disulfide linkage, an amide linkage, an ester linkage, a carbamate linkage, a thioester linkage, a thioate linkage, a phosphodiester linkage, or a diphosphate linkage. In some embodiments, the fluorescent probe is covalently bound to the polypeptide through a linker. In some embodiments, the fluorescent probe is non-covalently bound to the polypeptide. In certain embodiments, the fluorescent probe is bound to the polypeptide through hydrogen bonding, charge-charge interactions, van der Waals forces, hydrophobic interactions, or a combination thereof
In some embodiments, the detecting system is configured to detect the presence of xanthan gum in response to an increase in fluorescence and the fluorescent probe fluoresces when it is released from the polypeptide and has a lower fluorescence or does not fluorescence when it is bound to the polypeptide. In some embodiments, the detecting system is configured to detect the presence of xanthan gum in response to a decrease in fluorescence and the fluorescent probe fluoresces when it is bound to the enzyme and has a lower fluorescence or does not fluoresce when it is not bound to the polypeptide.
In some embodiments, the fluorescent probe is a fluorescent carbon nanotube. The fluorescent carbon nanotube may fluoresce when it is released from the polypeptide (unbound) and have a lower fluorescence or does not fluoresce when it is bound to the polypeptide. Alternatively, the fluorescent carbon nanotube may fluoresce when it is bound to the polypeptide and does not fluoresce or has a lower fluorescence when it is released from the polypeptide. The fluorescent carbon nanotube can be released from the polypeptide following a conformational change in the polypeptide as a result of the polypeptide interacting with xanthan gum. If the fluorescent carbon nanotube is covalently bound to the polypeptide, the fluorescent carbon nanotube can be released from the polypeptide when the covalent bond breaks as a result of the polypeptide interacting with xanthan gum.
In some embodiments, the fluorescent probe is a fluorophore. Suitable fluorophores include Cy®3 and Cy®5, methyl blue, methylene blue, a coumarin, tetramethylrhodamine 8-anilinonaphthalene-1-sulfonic acid, 9-anthroylcholine (9-AC), and 5-dimethylaminonaphthalene-5-sulfonic acid (dansyl). In certain embodiments, the fluorophore fluoresces in the orange region of the visible spectrum and can be excited with an excitation wavelength of 532 nm and visualized with a tetramethylrhodamine (TRITC) filter set. In other embodiments, the fluorophore fluoresces in the far-red region and can be excited with an excitation wavelength of 633 nm or 647 nm.
In some embodiments, fluorophore fluoresces when it is released from the polypeptide and has a lower fluorescence or does not fluoresce when it is bound to the polypeptide. In some embodiments, the fluorophore fluoresces when it is in contact with the polypeptide and does not fluoresce or has a lower fluorescence when it is released from the polypeptide. The fluorophore can be released from the polypeptide following a conformational change in the polypeptide as a result of an interaction between the polypeptide and xanthan gum. If the fluorophore is covalently bound to the polypeptide, the fluorophore can be released from the polypeptide when the covalent bond breaks as a result of the polypeptide interacting with xanthan gum.
In some embodiments, a xanthan gum detecting system includes a light source adapted to provide a wavelength of light to excite the fluorescent probe. The system can further include a detector for detecting a wavelength of light emitted from the fluorescent probe when the fluorescent probe is excited. For example, the system can include a UV-VIS detector. The detector can include a fluorescence monochromator. The detector can also include a photomultiplier.
In some embodiments, the polypeptide includes a quencher compound. The quencher compound can be a quencher fluorophore. In some embodiments, the quencher compound is a quencher dye. That is, as a distance between the quencher compound and the fluorescent probe decreases, the fluorescence of the fluorescent probe decreases, and as a distance between the quencher compound and the fluorescent probe increases, the fluorescence of the fluorescent probe increases. When the polypeptide interacts with xanthan gum (such as catalyzing the hydrolysis of xanthan gum), the distance between the quencher compound and the fluorescent probe changes, resulting in a change in fluorescence of the fluorescent probe that can be measured by fluorescent resonance energy transfer. In one example, when the polypeptide interacts with xanthan gum, the distance between the quencher compound and the fluorescent probe can decrease, resulting in a decrease in the fluorescence of the fluorescent probe that can be measured by fluorescent resonance energy transfer. Alternatively, when the polypeptide interacts with xanthan gum, the distance between the quencher compound and the fluorescent probe can increase, resulting in an increase in the fluorescence of the fluorescent probe that can be measured by fluorescent resonance energy transfer.
In some embodiments, the fluorescent probe is covalently bound to the N-terminus of the polypeptide and the quencher compound is covalently bound to the C-terminus of the polypeptide. In some embodiments, the fluorescent probe is covalently bound to the C-terminus of the polypeptide and the quencher compound is covalently bound to the N-terminus of the polypeptide.
Also provided in this disclosure is a xanthan gum detecting system that includes an enzyme bound to a fluorescent probe such that the fluorescent probe is released from the enzyme when the enzyme interacts with xanthan gum. Suitable enzymes include β-glucanohydrolase I and β-glucanohydrolase II. Suitable fluorescent probes fluorescent carbon nanotubes, Cy®3, Cy®5, methyl blue, methylene blue, and 8-anilinonaphthalene-1-sulfonic acid. In some embodiments, the system includes a light source adapted to provide a wavelength of light to excite the fluorescent probe and a detector for detecting a wavelength of light emitted from the fluorescent probe when the fluorescent probe is excited.
Also provided in this disclosure is a xanthan gum probe. The xanthum gum probe includes a polypeptide and a fluorescent probe.
The polypeptide can be an enzyme. The enzyme can be capable of hydrolyzing xanthan gum. For example, the enzyme can include a hydrolase such as β-glucanohydrolase I or β-glucanohydrolase II.
In some embodiments, the fluorescent probe is covalently bound to the polypeptide. In some embodiments, the fluorescent probe is non-covalently bound to the polypeptide. In certain embodiments, the fluorescent probe is bound to the polypeptide through hydrogen bonding, charge-charge interactions, van der Waals forces, hydrophobic interactions, or a combination thereof
In some embodiments, the fluorescent probe is a fluorescent carbon nanotube. The fluorescent carbon nanotube can be configured such that it fluoresces when it is released from the polypeptide and has a lower fluorescence or does not fluoresce when it is bound to the polypeptide. Alternatively, the fluorescent carbon nanotube can be configured such that it fluoresces when it bound to the polypeptide and does not fluoresce or has a lower fluorescence when it is released from the polypeptide. The fluorescent carbon nanotube can be released from the polypeptide following a conformational change in the polypeptide as a result of the polypeptide interacting with xanthan gum. If the fluorescent carbon nanotube is covalently bound to the polypeptide, the fluorescent carbon nanotube can be released from the polypeptide when the covalent bond breaks as a result of the polypeptide interacting with xanthan gum.
In some embodiments, the fluorescent probe is a fluorophore. Suitable fluorophores include Cy®3, Cy®5, methyl blue, methylene blue, and 8-anilinonaphthalene-1-sulfonic acid.
In some embodiments, fluorophore fluoresces when it is released from the polypeptide and has a lower fluorescence or does not fluoresce when it is bound to the polypeptide. In some embodiments, the fluorophore fluoresces when it is in contact with the polypeptide and does not fluoresce or has a lower fluorescence when it is released from the polypeptide. The fluorophore can be released from the polypeptide following a conformational change in the polypeptide as a result of the polypeptide interacting with xanthan gum. If the fluorophore is covalently bound to the polypeptide, the fluorophore can be released from the polypeptide when the covalent bond breaks as a result of the polypeptide interacting with xanthan gum.
In some embodiments, the polypeptide includes a quencher compound. The quencher compound can be a quencher fluorophore. In some embodiments, the quencher compound is a quencher dye. As a distance between the quencher compound and the fluorescent probe decreases, the fluorescence of the fluorescent probe may decrease. As a distance between the quencher compound and the fluorescent probe increases, the fluorescence of the fluorescent probe may increase. When the polypeptide interacts with xanthan gum (such as catalyzing the hydrolysis of xanthan gum), a distance between the quencher compound and the fluorescent probe can change, resulting in a change in fluorescence of the fluorescent probe that can be measured by fluorescent resonance energy transfer. In one example, when the polypeptide interacts with xanthan gum, a distance between the quencher compound and the fluorescent probe can decrease, resulting in a decrease in the fluorescence of the fluorescent probe that can be measured by fluorescent resonance energy transfer. Alternatively, when the polypeptide interacts with xanthan gum, a distance between the quencher compound and the fluorescent probe can increase, resulting in an increase in the fluorescence of the fluorescent probe that can be measured by fluorescent resonance energy transfer.
In some embodiments, the fluorescent probe is covalently bound to the N-terminus of the polypeptide and the quencher compound is covalently bound to the C-terminus of the polypeptide. In some embodiments, the fluorescent probe is covalently bound to the C-terminus of the polypeptide and the quencher compound is covalently bound to the N-terminus of the polypeptide.
Also provided in this disclosure is a xanthan gum probe that includes an enzyme bound to a fluorescent probe such that the fluorescent probe is released from the enzyme when the enzyme contacts xanthan gum (e.g., hydrolyzes xanthan gum). The enzyme is a β-glucanohydrolase I, a β-glucanohydrolase II, or a combination thereof. The fluorescent probe includes a fluorescent carbon nanotube, Cy®3, Cy®5, methyl blue, methylene blue, 8-anilinonaphthalene-1-sulfonic acid, or a combination thereof.
Also provided in this disclosure is a device for the detection of xanthan gum. The device includes a sensing region that includes a polypeptide bound to a fluorescent probe. The device additionally includes a light source adapted to direct light to the sensing region. Further, the light source is adapted to provide one or more wavelengths of light capable of exciting the fluorescent probe. The device also includes a detector for detecting a fluorescence emitted from the fluorescent probe when it is excited by the light source.
The polypeptide can be any polypeptide as described in this disclosure. The fluorescent probe can be any fluorescent probe as described in this disclosure.
Also provided in this disclosure is a kit for the detection of xanthan gum. The kit includes a polypeptide and a fluorescent probe.
The polypeptide and fluorescent probe can be kept separate in the kit and then mixed prior to use to allow the fluorescent probe to bind to the polypeptide. The polypeptide and fluorescent probe can be kept together in the kit such that the fluorescent probe is bound to the polypeptide.
In some embodiments, the kit includes a light source and a detector. The light source can be adapted to provide one or more wavelengths of light capable of exciting the fluorescent probe. The detector can be configured to detect fluorescence emission from the fluorescent probe.
The polypeptide can be any polypeptide as described in this disclosure. The fluorescent probe can be any fluorescent probe as described in this disclosure.
Also provided is a method for detecting xanthan gum in a subterranean formation.
The phrase “subterranean formation” refers to any material under the surface of the earth, including under the surface of the bottom of the ocean. For example, a subterranean formation can be any section of a wellbore and any section of a subterranean petroleum- or water-producing formation or region in fluid contact with the wellbore. Placing a material in a subterranean formation can include contacting the material with any section of a wellbore or with any subterranean region in fluid contact therewith. Subterranean materials can include any materials placed into the wellbore such as cement, drill shafts, liners, tubing, casing, or screens; placing a material in a subterranean formation can include contacting with such subterranean materials. In some examples, a subterranean formation or material can be any below-ground region that can produce liquid or gaseous petroleum materials, water, or any section below-ground in fluid contact therewith. For example, a subterranean formation or material can be at least one of an area desired to be fractured, a fracture, or an area surrounding a fracture, and a flow pathway or an area surrounding a flow pathway, wherein a fracture or a flow pathway can be optionally fluidly connected to a subterranean petroleum- or water-producing region, directly or through one or more fractures or flow pathways.
The phrase “treatment of a subterranean formation” refers to any activity directed to extraction of water or petroleum materials from a subterranean petroleum- or water-producing formation or region, for example, including drilling, stimulation, hydraulic fracturing, clean-up, acidizing, completion, cementing, remedial treatment, abandonment, and the like.
A method for detecting xanthan gum can include placing a polypeptide bound to a fluorescent probe into the subterranean formation. For example, the polypeptide bound to a fluorescent probe can be placed into the subterranean formation using a suitable fluid. The fluid can be an aqueous-based fluid. Examples of suitable aqueous-based fluids include fresh water; saltwater (such as water containing one or more dissolved salts); brine (saturated salt water), seawater; and any combination thereof. In some embodiments, a method for detecting xanthan gum includes directing light into the subterranean formation. The light can include at least one wavelength adapted to excite the fluorescent probe. The method can also include assessing fluorescent emission from the fluorescent probe as an indication of the presence or absence of xanthan gum in the subterranean formation.
In some embodiments, a method for detecting xanthan gum includes collecting a fluid sample from the subterranean formation and combining the sample with a polypeptide bound to a fluorescent probe. The method can also include assessing fluorescent emission from the fluorescent probe as an indication of the presence or absence of xanthan gum in the subterranean formation.
In some embodiments, a method of detecting xanthan gum includes quantifying the amount of xanthan gum based on an intensity of fluorescent emission from the fluorescent probe.
The polypeptide can be any polypeptide as described in this disclosure. The fluorescent probe can be any fluorescent probe as described in this disclosure.
In some embodiments, a method of detecting xanthan gum includes treating a subterranean formation with a polymer flood after the presence or absence of xanthan gum is assessed or after the concentration of xanthan gum is assessed. In certain embodiments, the method includes adjusting an amount of xanthan gum in the polymer flood based on assessing the presence or absence of xanthan gum or determining a concentration of xanthan gum.
In some embodiments, a method of detecting xanthan gum includes delivering a polypeptide bound to a fluorescent probe to a sampling location; directing, to the sampling location, light capable of exciting the fluorescent probe when the fluorescent probe is separated from the polypeptide; and assessing fluorescent emission from the fluorescent probe in the sampling location.
In some embodiments, the sampling location is a subterranean formation. In some embodiments, the polypeptide bound to the fluorescent probe can be delivered to a sampling location using a suitable fluid, such as an aqueous-based fluid. Examples of suitable aqueous-based fluids include fresh water; saltwater (water containing one or more dissolved salts); brine (saturated salt water), seawater; or any combination thereof.
This application claims the benefit of U.S. application Ser. No. 62/299,193 entitled “DETECTING XANTHAN GUM” and filed on Feb. 24, 2016, which is incorporated herein by reference in its entirety.
Number | Date | Country | |
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62299193 | Feb 2016 | US |