Patent Grant
10545076
The present invention relates to a method for the determination of analytes in a sample matrix, particularly of mycotoxin levels in cereal grains, and in particular to a method involving analyte extraction using solvents.
Mycotoxins tend to be very stable and may produce severe illness when ingested, inhaled, or introduced into the body by any other means. For instance, mycotoxins are known to be poisonous or carcinogenic when consumed by humans or animals. Mycotoxins are produced by molds and fungi during their growth on food and feed and may remain in food and feed long after the mold or fungus that produced them has died. Therefore products that are not visibly moldy or do not test positive for mold count can still contain potentially dangerous levels of mycotoxins.
Several countries have currently established or proposed regulations for control of mycotoxins (primarily the aflatoxins) in food and animal feed. In order to harmonize these regulations, the Food and Drug Administration, for example, has established guidelines for the levels of aflatoxin permitted in commodities for further processing. The permitted levels vary depending upon the intended end usage of the commodity. The European Union, for example, has also established regulations for the levels of ochratoxin A (OTA), Deoxynivalenol (DON); Zearalenone (ZEA) and several other mycotoxins.
The enforcement of these regulations requires accurate monitoring of suspected commodities. However, since mycotoxins tend to be inhomogeneously distributed throughout a lot of cereal it becomes prohibitively expensive to carry out laboratory analysis on the number of samples required to be representative of the particular lot. Therefore, there is a continuous need for a rapid and inexpensive method for detecting the presence of mycotoxins in a lot of cereal grain so that, a lot containing mycotoxins may be rapidly identified to allow further, more accurate analysis to be performed in a laboratory.
Solvent extraction is a vital step in most detection methodologies. Indeed many authorities do not prescribe specific determination method requirements; rather certain performance criteria are mandated: for example, with the European Union Commission Regulation (EC) No 401/2006 of 23 Feb. 2006 criteria are prescribed which include extraction efficiency requirements stipulating a recovery of between 50% and 120% depending on mycotoxin. Generally, these requirements are selected in order to ensure that any test methodology will achieve acceptable levels of precision, accuracy and levels of detection. If extraction is unable to be performed reliably and consistently then the results from the analysis will be imprecise. It is therefore generally accepted that extraction should be performed for a period long enough to reach equilibrium for the extraction process; in the case of reference methods for mycotoxin analysis this period is of the order of an hour. Obviously, this adds considerably to the overall analysis time and leads away from the provision of a rapid assay methodology.
However, it is known from Zabe et. al (‘Ethanol Extraction Method for a Rapid Test for Aflatoxin in Corn’, pages 297-305, ACS Symposium Series 1001—Food Contaminants—Mycotoxins and Food Allergens) to provide a method which includes the rapid solvent extraction of a mycotoxin. Here it is disclosed that using a mixture by volume of 80% ethanol and 20% water sufficient extraction of aflatoxin from corn to meet regulatory demands may be achieved in one minute. Unfortunately, this level of ethanol represents a small but still unacceptable fire risk as well as providing a solvent solution that is hazardous both to health and to the environment.
Another extraction methodology is described in WO 2011/023230 of FOSS Analytical AB. Here it disclosed that adequate extraction of mycotoxin from cereal grain may be achieved using a solvent mixture by volume of 20% ethanol and 80% water. This significantly reduces the risk and hazard aspects associated with the higher concentration ethanol or other organic solvents (such as methanol or acetonitrile) but unfortunately adequate extraction takes around one hour to achieve, which does not lend itself to utilisation in a rapid determination technique.
It is the aim of the present invention to alleviate at least one of the problems associated with the known extraction techniques.
According to one aspect of the present invention there is provided a method for the quantitative assay of one or more analytes, particularly mycotoxins, extracted from a sample matrix, particularly cereal grain, comprising the steps, not essentially in the order presented, of: A) performing analyte extraction on a plurality of reference sample matrices, each having a different reference value level of analyte, said analyte extraction comprising combining each sample matrix with a solvent for a same extraction period which is less than a time required for reaching equilibrium; and separating the analyte containing solvent from the sample matrix; B) measuring a level of analyte present in the separated solvent obtained from each reference sample matrix; C) generating a computer executable calibration by which is established a mathematical relationship between levels of analyte extracted from each of the reference matrices and the reference level of analyte in the same each reference matrix; D) repeating the steps A and B substituting a sample matrix having an unknown level of analyte for the reference sample matrix to obtain a measure of a level of analyte in the separated solvent for the sample matrix; and E) applying in a computer the calibration generated at step C to the level of analyte determined at step D to thereby derive a measure of the level of analyte in the sample matrix. With the realisation that reliable and repeatable incomplete, non-equilibrium extraction under reproducible extraction conditions may be associated with the level of analyte present in the sample matrix which would be obtained from an equilibrium extraction the inventors have provided an assay method that does not rely on reaching extraction equilibrium. This allows an assay to be performed in shorter times and/or with solvents not normally considered suitable.
In order to achieve a rapid separation and thereby enhance the reliability and repeatability of the extraction process the separation may be usefully performed by applying a force to separate the solid and liquid materials. This may be done by forcing the solvent/matrix mixture through a filter, such as may simply and reliably be achieved using a French press, or by using a centrifuge typically of either the sediment or of the filter type.
It will be appreciated that it is entirely likely that one person (legal or real) may perform the steps up to and including generating the calibration model (steps A to C above) and another person (legal or real) may perform extraction and level measurements on sample matrices having an unknown level of analyte and apply the calibration model to these measurements. Thus according to another aspect of the present invention there is provided a method for the assay of one or more analytes in a sample matrix comprising the steps of performing analyte extraction on the sample matrix, said analyte extraction comprising combining the sample matrix with a solvent for an extraction period which is less than a time required for reaching equilibrium and separating the analyte containing solvent from the sample matrix; measuring a level of analyte present in the separated solvent; and applying in a computer a calibration by which is established a mathematical relationship between levels of analyte extracted from each of a plurality of reference samples by means of the process employed above in the extraction for the sample matrix and a reference value of the levels of analyte for each reference sample to thereby derive a measure of the level of analyte in the sample matrix.
These, as well as additional objects, features and advantages of the present invention, will be better understood through the following illustrative and non-limiting detailed description of embodiments of the present invention, made with reference to the drawings of the appended figures, of which:
An exemplary method for assay of analytes according to the present invention is illustrated generally by the flow diagram of
Once separated, at step 120 the level of analyte in the solvent is measured. The measurement technique employed in this determination will of course depend on the analytes under investigation. Steps 110 and 120 will be repeated for each of a plurality of reference sample matrices having a different reference analyte level and the results for each sample matrix made available to a computer. Reference values of the level of analyte contained in each reference matrix are obtained (step 130) and also made available to the computer. These reference values could be obtained from knowledge of a level of analyte deliberately introduced into the reference matrices or from a reference measurement made on the matrices. In the latter case it is advantageous if the same measurement technique is used as that used to obtain the level of analyte in the solvent. At step 140 a computer executable mathematical model is constructed from the reference level values (reference dataset) and from those measured in the separated solvent (solvent dataset) for the same sample matrix which links an amount of analyte measured in a solvent to a level of analyte present in the sample matrix. Regression analysis of the datasets is used to model the relationship between the variables in a known manner. In particular simple linear regression may be performed on the datasets in order to determine the mathematical relationship to be expressed in the computer executable calibration model. This model is then made available to the same or a different computer for use therein in determining a level of analyte in a test sample matrix.
At step 150 an analyte extraction is performed using a test sample matrix having an unknown level of analyte. The extraction procedure employed at this step 150 is necessarily substantially similar to the one employed at step 110 to extract analyte from reference sample matrices. It is to be understood that ‘substantially’ is to be taken to include an extraction procedure that varies from the one employed at step 110 to an extent that does not measurably impact the amount of analyte extracted into the solvent from a same reference matrix. Once separated a measurement is made (step 160) of a level of analyte present in the separated solvent is made using a substantially similar measurement technique and process as employed to measure the level of analyte extracted from the sample matrices at step 120. This measured level is provided to the computer that has been provided with access to the computer executable calibration model and at step 170 the calibration is applied by the computer to the measured level and a quantitative determination is made of the amount of analyte present in the unknown sample matrix which may be then output from the computer in machine or preferably human understandable format.
It will be appreciated that the process steps described above need not necessarily be performed in the order provided in respect of this particular embodiment and that not all process steps needs be performed by the same person or with the same frequency to fall within the scope of the invention as claimed. Indeed it is entirely likely that one person (legal or real) may perform the steps up to and including generating the calibration model (steps 110 to 140) and another person (legal or real) may perform extraction and level measurements on sample matrices having an unknown level of analyte and apply the calibration model to these measurements (steps 150 to 170).
Typically the steps involved in the assay of unknown samples (steps 150 to 170) may be performed a large plurality of times whereas the steps involved in generating the calibration model (steps 110 to 140) may be performed relatively seldom. Thus, according to another exemplary method for the assay of one or more analytes in a sample matrix the steps to be performed comprises performing analyte extraction on the sample matrix 150, said analyte extraction comprising combining the sample matrix with a solvent for an extraction period which is less than that required for reaching equilibrium and separating the analyte containing solvent from the sample matrix; measuring a level of analyte present in the separated solvent (step 160); and, at step 170, applying in a computer a calibration by which is established a mathematical relationship between levels of analyte extracted from each of a plurality of reference samples by means of the process employed above in the extraction for the sample matrix and a reference value of the levels of analyte for each reference sample to thereby derive a measure of the level of analyte in the sample matrix.
Measurement of the level of analyte at step 160 (in one embodiment also at step 120) may advantageously be performed using a conventional flow cytometer arrangement 710 illustrated in
The separated solvent obtained at step 150 is mixed with a known amount of fluorescently labelled analyte molecules and the coated micro-beads 770. The analyte from the separated solvent and the fluorescently labelled analyte molecules compete for the available binding site on the micro-beads and once equilibrium has been reached the fluorescence from the beads will reflect their relative concentration. Traditionally, this reaction is allowed to equilibrate by utilizing 30-60 minutes incubation of the reagents but the inventors have discovered that quantitative information may be extracted after few minutes of incubation, albeit with increased uncertainty. The robustness of predictions based on early measurements may be increased by tracking the reaction kinetics, rather than measuring in a fixed time window.
A solution containing the incubated reagents is injected into the flow cell 720 through sample inlet port 700 and is surrounded by a particle free sheath liquid 790. The solution is flowed through the flow cell 720 as a hydrodynamically focused sample stream 760 within which are suspended the micro-beads 770. A light beam 780 of substantially monochromatic light is generated by the light source 730, for example a laser light source or a light emitting diode, and is made incident upon the focussed sample stream 760 in the flow cell 720. By focusing the light beam to a small spot, individual beads may be optically addressed and the fluorescence from the labelled analytes on the beads can be distinguished from that from the labelled analytes in solution. A part of the emitted light is collected, for example with a lens, filtered to select a specific wavelength range and directed towards the appropriate one or more optical detectors 740. The output from each of the optical detector 740 is sent to a signal processor 750, configured such that, for instance, the total and/or maximum fluorescence from the individual beads may be read out and stored for later analysis.
In a modification to the flow cytometer measurement arrangement 710 described above the micro-beads 770 may comprise different sets of micro-beads with each set consisting of micro-beads coated with molecules having a binding affinity for an analyte that is specific for that set and different to the other sets. The fluorescent label attached to the analyte molecule may also be selected so as to provide a different wavelength (which term includes a narrow band of wavelengths) fluorescence signal for each type of analyte. In this way multiple analytes may be readily assayed simultaneously by differentiating between the wavelengths of fluorescence detected by the detector(s) 740. As is well known, this may be achieved by using a plurality of detectors where each of the plurality is configured (for example by the addition of an appropriate filter before each detector) to detect a different fluorescence wavelength. Alternatively, the same fluorescent label is attached to the different analytes. The micro-beads 770 are then stained with a dye emitting in a different wavelength band and the intensity of the bead fluorescence is used as a label to indicate the type of analyte that this bead binds. Either method advantageously permits simultaneous detection of multiple analytes from the sample matrix.
One operative definition of the time needed to reach equilibrium under a given set of conditions may be stated as follows (see also
It is to be understood that ‘substantially’; ‘substantially similar’ and like terms as used herein are to be taken to include any procedure employed in respect of an unknown sample matrices that varies from the ones employed at steps 110 and 120 in respect of the reference sample matrices to an extent that does not measurably impact the amount of analyte which would be extracted into the solvent from a same reference matrix.
Experimental Studies
The samples used in the demonstration of effects of different extraction times and solvent types consisted of a wheat sample matrix having reference mycotoxin levels of: DON: 1987 ppb±123 ppb and OTA: 18 ppb±3 ppb.
The samples used in the demonstration of extraction with 30% ethanol in 2 minutes consisted of five wheat sample matrices, each having a different mycotoxin concentration as per the table below:
The used extraction solvents were aqueous solutions of ethanol (30% V/V), acetonitrile (60% V/V) and methanol (80% V/V). The choice of the organic component of the solvent was based what normally is used in scientific studies.
Extraction times of 1, 2, 4 and 30 min. were chosen. The 30 minutes extraction times were used as a reference and a measure of the maximum recovery, Rm, of each extraction solvent. In order to obtain precise extractions, a fast separation was performed by filtering in a French press before a fine filtering. The French press is similar in construction and operation to the well known French coffee press and comprises a narrow cylindrical beaker equipped with plunger that fits tightly but slidably in the cylinder and which has a mesh filter at one end. As the plunger is moved through the mixture consisting of sample matrix and analyte containing solvent the solvent is forced through the filter and separated from the sample matrix. This pressure enhanced separation increased the speed from extraction to separated extract greatly, and it normally took no longer that 30 seconds. In an alternative embodiment the extraction may be performed using a standard centrifuge to separate the solvent and the sample matrix, for example by means of filtration or sedimentation.
An overview of the extraction and sample clean up procedures for DON and OTA in connection with HPLC analysis in a method according to the present invention which is employed in the experimental studies is illustrated in
In the sample preparation of DON for the reference method of a VICAM DONtest WB immuno affinity column (IAC) was used as a clean-up step. The reference method follows the procedure for sample preparation described by VICAM (DONtest HPLC & DONtest WB, Instruction Manual (for HPLC use), Rev. B, VICAM). HPLC settings used were: 1 mL/min flow of acetonitrile/water 10/90. 50 μL injected with 500 μL/min draw and inject speed. Column: Phenomenex reverse phase Synergi 4 μm, Hydro-RP 250×4.6 mm, with precolumn. Column department heated to 30° C. UV-VIS detection at 218 nm±2 nm with reference at 500 nm±50 nm.
The extraction and clean up procedure followed is:
For quantification of DON extracted with organic solvents a dilution step (step 215a) is included in the sample preparation. This is because the VICAM IAC is optimized for water extracts. If an extract with a high content of organic solvent is applied to the column, DON will not be bound in the column and a low recovery is achieved. When extracting with organic solvents the dilution step comprises:
Evaporate methanol from the sample and reconstitute with 300 μL HPLC mobile phase (replaces point 11 above).
For the extraction and Clean up of OTA the procedure followed was:
Results from the experiment with varying extraction solvent and time using one naturally contaminated wheat sample (1987 ppb DON and 18 ppb OTA) are illustrated in
In
The same is evident when plotting the recoveries of OTA as a function of extraction time for different solvents; the largest amount of mycotoxin is extracted during the first four minutes (
Generally OTA extracted by 60% acetonitrile in 1-4 min gave recoveries from 45-55%. In the same interval 30% ethanol gave recoveries of 28-29%. 80% methanol gave recoveries in between with 33-39%. It can be deduced from the time and solvent experiments for DON that the largest amount of DON is extracted within the first 4 minutes and that the water content of the solvent has a positive effect on the recovery.
As demonstrated above it will be appreciated that 30% ethanol in water could be a feasible solvent for fast extraction of both DON and OTA, and is chosen for further experiments. Indeed a fast but incomplete extraction of both DON and OTA may be achieved using an ethanol concentration of between 20% and 40% in water. In
Linear regression analysis, here for example in the form of a least squares fit, was performed on the DON datasets and the OTA datasets and the resulting straight line fits are shown in
As will be appreciated from a consideration of the above experimental studies a fast extraction method for mycotoxins, illustrated here for Deoxynivalenol (DON) and Ochratoxin A (OTA), has been established. It is possible to extract mycotoxins with 30% ethanol in 2 minutes with an average recovery of 70% for DON and 44% for OTA. For concentrations found by HPLC and reference concentrations, linear regressions could be obtained for the different mycotoxins, from which a computer executable calibration expressing each regression could be established for use in determining amounts of analytes in an unknown sample matrix (for example wheat) from levels present in solvent extracted using substantially similar techniques to those described above. For DON in the range of 0-3500 ppb a R-squared value of 0.99 was found, and for OTA in the range of 0-101.8 ppb the R-squared was 0.96.
It will be appreciated that the method according to the present invention is suitable for use in extracting other mycotoxins, such as fumonisins, ZEA, T2-toxin and aflatoxins, from the same or other types of cereal grains and may be applied more generally to other extraction based assays which traditionally rely on complete recovery. It is intended that the scope of protection afforded to the invention is limited only by the wording of the claims and not by the exemplary embodiments and experimental studies provided above.
| Filing Document | Filing Date | Country | Kind |
|---|---|---|---|
| PCT/IB2014/065461 | 10/20/2014 | WO | 00 |
| Publishing Document | Publishing Date | Country | Kind |
|---|---|---|---|
| WO2016/063104 | 4/28/2016 | WO | A |
| Number | Date | Country |
|---|---|---|
| WO-2011023230 | Mar 2011 | WO |
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| Number | Date | Country | |
|---|---|---|---|
| 20170248500 A1 | Aug 2017 | US |
