This application is based upon and claims the benefit of priority from prior Japanese Patent Application No. 2008-202987, filed Aug. 6, 2008, the entire contents of which are incorporated herein by reference.
1. Field of the Invention
The present invention relates to a method of easily testing the condition of an electrochemical measuring apparatus used for performing electrochemical measurement by using a detection cassette and an apparatus for the test.
2. Description of the Related Art
An electrochemical measuring method such as voltammetry has very high selectivity and can perform high-sensitivity measurement, and hence is frequently used for the analysis and evaluation of clinical biological samples, environmental samples, and the like.
With advances in genetic engineering, it is possible to genetically diagnose and prevent diseases in the medical field. This technique is called genetic diagnosis, which allows diagnosis or prediction of a disease before it develops or at a very early stage by detecting a human genetic defect or change that is the cause of the disease. Advances in studies on the relationships between genotypes and diseases, together with decoding of the human genome, are implementing medical treatments suitable for the genotypes of individuals (tailor-made medical services). It is therefore very important to easily detect genes and determine genotypes.
Nucleic acid detection methods and nucleic acid detection apparatuses to which the above electrochemical measuring method is applied are under development as methods to allow highly accurate and easy detection. For example, Jpn. Pat. Appln. KOKAI Publication No. 2004-125777 has proposed a system that automatically performs detection processing for a sample nucleic acid sequence, from a reaction to liquid feeding and measurement, by inserting a nucleic acid detection cassette into an electrochemical measuring apparatus. The nucleic acid detection cassette includes a working electrode to which a nucleic acid probe is immobilized, a counter electrode, a reference electrode, and a channel that allows a sample nucleic acid solution to flow on the electrodes. The electrochemical measuring apparatus includes a temperature control system necessary for a nucleic acid reaction, a reagent feeding system, and an electrochemical measuring system for detection. This system is expected as a system that can easily perform nucleic acid detection.
Recently, the development of such apparatuses has already shifted from research applications to applications for actual diagnosis and the like. Demands have therefore arisen for improvement in reliability. In applications for diagnosis and the like, an enormous number of samples are processed. Even if, therefore, a trouble occurs in an electrochemical measuring apparatus, the abnormality is difficult to recognize. In addition, even if a result suspicious of a trouble is output, it is not easy for a person without expert skill to diagnose whether the result indicates a trouble. Furthermore, similar problems arise in apparatuses that perform electrochemical measurement on other types of materials as detection targets as well as nucleic acids.
According to an aspect of the present invention, a diagnostic cassette for diagnosing an electrochemical measuring apparatus is provided. The electrochemical measuring apparatus is to perform electrochemical measurement on a sample in a sample cassette, which is attachable to and detachable from the electrochemical measuring apparatus, and includes a first working electrode interface, a first counter electrode interface, and a first reference electrode interface. The diagnostic cassette is attachable to and detachable from the electrochemical measuring apparatus like the sample cassette, and includes a second working electrode interface connectable to the first working electrode interface, a second counter electrode interface connectable to the first counter electrode interface, a second reference electrode interface connectable to the first reference electrode interface, and one of a capacitor and a resistor including one terminal connected to the second working electrode interface and the other terminal connected to the second counter electrode interface and the second reference electrode interface.
According to another aspect of the present invention, a method of diagnosing the electrochemical measuring apparatus is provided. The method includes steps of loading the diagnostic cassette into the electrochemical measuring apparatus to perform electrochemical measurement, and diagnosing, from an output value obtained by the electrochemical measurement, whether electrochemical control on the metadata measuring apparatus is normally performed.
A nucleic acid detection apparatus and a nucleic acid detection cassette designed for a nucleic acid as a sample will be described first. A diagnostic cassette according to an embodiment will then be described.
As shown in
A nucleic acid detection cassette 200 includes a working electrode 240, a counter electrode 250, and a reference electrode 260. For example, the nucleic acid detection cassette 200 includes working electrodes 240, at least one counter electrode 250, and at least one reference electrode 260. In general, the working electrode 240 is used as a nucleic acid detection electrode. The nucleic acid detection cassette 200 also includes a detection-cassette-side interface (third interface) 270. The detection-cassette-side interface (third interface) 270 includes a third working electrode interface, a third counter electrode interface, and a third reference electrode interface. The working electrode 240, the counter electrode 250, and the reference electrode 260 are electrically connected to the third working electrode interface, third counter electrode interface, and third reference electrode interface of the detection-cassette-side interface (third interface) 270, respectively. Although not shown, the nucleic acid detection cassette 200 has a channel allowing a solution containing a detection target nucleic acid and/or a nucleic acid recognition body to flow. The working electrode 240, the counter electrode 250, and the reference electrode 260 are provided in the channel.
When the nucleic acid detection cassette 200 is loaded into the nucleic acid detection apparatus 100, the apparatus-side interface (first interface) 150 is electrically connected to the detection-cassette-side interface (third interface) 270. That is, the first working electrode interface, first counter electrode interface, and first reference electrode interface of the apparatus-side interface 150 are electrically connected to the third working electrode interface, third counter electrode interface, and third reference electrode interface of the detection-cassette-side interface 270, respectively.
The apparatus-side interface 150 includes probe pins, connectors, and the like for electric connection. If the apparatus-side interface 150 includes probe pins, the cassette-side interface 270 includes pads. If the apparatus-side interface 150 includes male connectors, the cassette-side interface 270 includes female connectors. If the contact resistance between these interfaces greatly varies or disconnection or short circuit occurs, large noise is generated in an obtained current signal, or no current value can be obtained (the current value becomes 0).
As shown in
As shown in
The reliability of the function of the electrochemical measuring system 130 of the nucleic acid detection apparatus 100 may deteriorate in terms of the following items due to external noise, deterioration in components, variations in power supply voltage, local solution resistance accompanying variations in reagent concentration, and variations in electric capacitance:
Conventionally, an oscilloscope or tester is used to check each part in diagnosis on each item. For this reason, the user needs to have an expert skill and knowledge and use specialized tools.
Consider a technique of performing electrochemical measurement by injecting, into a nucleic acid detection cassette, a standard reagent as a solution of a material that causes oxidation or a reduction reaction, and performing diagnosis based on the obtained current. According to this technique, large errors occur due to the concentration of an oxidized or reduced material and electrode surface states, and hence reliability is poor in measurement in a microchannel and at microelectrodes.
The present invention relates to a technique of diagnosing the electrochemical measuring system 130 of the nucleic acid detection apparatus 100 by using a diagnostic cassette attachable to and detachable from the nucleic acid detection apparatus 100 like the nucleic acid detection cassette 200. More specifically, the present invention is directed to a diagnostic cassette and a diagnosis method using the diagnostic cassette. This diagnostic cassette is loaded into a diagnosis target apparatus in place of a detection cassette to perform electrochemical detection, and the normality/abnormality of the nucleic acid detection apparatus is diagnosed on the basis of the output result.
In diagnosis by a diagnostic cassette, as shown in
The following is a case in which a nucleic acid detection apparatus is diagnosed by using a diagnostic cassette.
<Preparation>
First of all, a current signal in the diagnostic cassette is measured by the linear sweep voltammetry method using the potentiostat circuit that operates normally. This diagnostic cassette has a channel on an internal diagnostic substrate. In the channel, SiO2 electrodes (thickness: 5 nm), counter electrodes, and reference electrodes are provided on an N-type Si substrate. An electrolyte obtained by dissolving an electrolyte in a solvent is injected into the channel in advance.
<Diagnosis on Nucleic Acid Detection Apparatus>
As shown in
A diagnostic cassette 300 will be described below with reference to
The diagnostic cassette 300 has an arrangement similar to that of the nucleic acid detection cassette 200 attachable to and detachable from the nucleic acid detection apparatus 100, and is attachable to and detachable from the nucleic acid detection apparatus 100 like the nucleic acid detection cassette 200.
More specifically, as shown in
Each element 340 is used to diagnose the electrochemical measuring system 130 of the nucleic acid detection apparatus 100, and outputs a signal for diagnosing the electrochemical measuring system 130 in response to a supplied input.
The channel 380 of the diagnostic substrate 330 has substantially the same shape as that of the channel of the nucleic acid detection cassette 200.
The elements 340, counter electrode 350, and reference electrode 360 of the diagnostic substrate 330 are arranged in substantially the same layout as that of the working electrodes 240, counter electrodes 250, and reference electrodes 260 of the nucleic acid detection cassette 200.
The element 340, counter electrode 350, and reference electrode 360 are electrically connected to the second working electrode interface, second counter electrode interface, and second reference electrode interface of the diagnosis-cassette-side interface (second interface) 370, respectively.
The diagnosis-cassette-side interface (second interface) 370 has substantially the same layout as that of the detection-cassette-side interface (third interface) 270 of the nucleic acid detection cassette 200. When the diagnostic cassette is loaded into the nucleic acid detection apparatus 100, the apparatus-side interface (first interface) 150 is electrically connected to the diagnosis-cassette-side interface (second interface) 370. That is, the first working electrode interface, first counter electrode interface, and first reference electrode interface of the apparatus-side interface 150 are electrically connected to the second working electrode interface, second counter electrode interface, and second reference electrode interface of the detection-cassette-side interface 270, respectively.
As shown in
The elements 340 are capacitors or resistors.
As shown in
A commercially available solid-state element may be fixed as the element 340 on the diagnostic substrate 330 by soldering, contact bonding, or the like. The size of the element 340 is not specifically limited but is preferably minimized because diagnosis can be performed in consideration of local influences. The size of the element 340 is preferably 1.0×0.5 mm or less, more preferably 0.6×0.3 mm or less, and still more preferably 0.4×0.2 mm or less.
As shown in
The substrate 342 may have a flat or three-dimensional surface. In addition, the substrate 342 may be porous.
The thin layer 344 may be formed by a layer forming method such as sputtering, vapor deposition, or spin coating or a chemical reaction such as thermal oxidation. The thin layer 344 is not limited to any specific material as long as it has a characteristic that can output a signal suitable for diagnosis. It is possible to use Si, GaAs, Cu, Al, Ag, Ti, Cr, or one of their oxides as a layer material. It is also possible to use, as a layer material, an organic material, e.g., polyethylene, ethylene, polypropylene, polyisobutylene, polyethylene terephthalate, unsaturated polyester, fluorine-containing resin, polyvinylchloride, polyvinylidene, polyvinyl acetate, polyvinyl alcohol, polyvinyl acetal, acrylic resin, polyacrylonitrile, polystyrene, acetal resin, polycarbonate, polyamide, phenol resin, urea resin, epoxy resin, melamine resin, styrene-acrylonitrile copolymer, acrylonitrilebutadiene-styrene copolymer, silicone resin, polyphenylene oxide, or polysulfone. It is also possible to use, as a layer material, an alkane skeleton, alkyne skeleton, alkene skeleton, ethyleneglycol skeleton, or a molecule having a nucleic acid strand.
If the element 340 comprises a capacitor, an obtained current value I is determined by
I=C·Vi+k1
where C is a capacitor capacitance, Vi is a voltage scan rate, and k1 is a correction constant.
If the element 340 comprises a capacitor using a thin layer, in particular, the capacitor capacitance C is represented by
C=ε·S/d
where ε is the dielectric constant of the thin layer, S is the area of the thin layer, and d is the average thickness of the thin layer. The dielectric constant ε is a value specific to the material forming the thin layer.
Let IFM be the detected current value obtained from a double-stranded nucleic acid in electrochemical detection by the general nucleic acid detection cassette 200, and IMM be the detected current value obtained from a single-stranded nucleic acid. That is, let IFM be the detected current value obtained at the working electrode 240 of the nucleic acid detection cassette 200 that has hybridized with a sample nucleic acid, and IMM (<IFM) be the detected current value obtained at the working electrode 240 of the nucleic acid detection cassette 200 that has not hybridized with a sample nucleic acid. In this case, the capacitor capacitance C of the element 340 desirably falls within the range defined by
(10×IFM−k1)/Vi>C>( 1/10×IMM−k1)/Vi
where k1 is a correction constant.
If the element 340 comprises a capacitor using a thin layer, in particular, the ratio between the area S and layer thickness d of the thin layer forming the element 340 desirably falls within the range defined by
(10×IFM−k2)/(ε·Vi)>S/d>( 1/10×IMM−k2)/(ε·Vi).
As a result, the current value obtained from the diagnostic cassette 300 falls within the range of 10 times IFM to 1/10 IMM and has a current value generally equal to IFM or IMM obtained from the nucleic acid detection cassette 200, thus improving the accuracy of diagnosis.
The element 340 comprises a resistor, the obtained current value I is determined by
I=V/R+k3
where R is a resistance, V is a potential, and k3 is a correction constant.
If the element 340 comprises a resistor using a thin layer, in particular, the resistance R is represented by
R=ρ·d/S
where ρ is the resistivity of the thin layer, S is the area of the thin layer, and d is the thickness of the thin layer. The resistivity ρ is a value specific to the material forming the layer.
Let IFM be the detected current value obtained from a double-stranded nucleic acid in electrochemical detection by a general nucleic acid detection cassette, and IMM be the detected current value obtained from a single-stranded nucleic acid. In this case, the resistance R of the element 340 desirably falls within the range defined by
V/(10×IFM−k3)>R>V/( 1/10×IMM−k3)
where k3 is a correction constant.
If the element 340 comprises a resistor using a thin layer, in particular, the ratio between the area S and thin layer d of the thin layer forming the element 340 desirably falls within the range defined by
(10×IFM−k4)·ρ/V>S/d>( 1/10×IMM−k4)·ρ/V.
As a result, the current value obtained from the diagnostic cassette 300 falls within the range of 10 times IFM to 1/10 IMM and has a current value generally equal to IFM or IMM obtained from the nucleic acid detection cassette 200, thus improving the accuracy of diagnosis.
In addition, the element 340 may have characteristics. For example, impedance measurement may be performed by using an element having both a capacitance characteristic and a resistance characteristic. Separating the obtained electrical signal into a resistance value and a capacitance value allows efficient diagnosis.
A diagnostic cassette has the same arrangement as that shown in
The user who is to diagnose a nucleic acid detection apparatus 100 sets this diagnostic cassette in the nucleic acid detection apparatus 100 like a nucleic acid detection cassette, and performs electrochemical measurement as in the case with the nucleic acid detection cassette. Determining whether the obtained current value falls within a predetermined variation range can diagnose whether the nucleic acid detection apparatus 100 is normally operating.
A diagnostic cassette has the same arrangement as that shown in
The user who is to diagnose a nucleic acid detection apparatus 100 sets this diagnostic cassette in the nucleic acid detection apparatus 100 like a nucleic acid detection cassette, and performs electrochemical measurement as in the case with the nucleic acid detection cassette. Determining whether the obtained current value falls within a predetermined variation range can diagnose whether the nucleic acid detection apparatus 100 is normally operating.
A diagnostic cassette has the same arrangement as that shown in
The user who is to diagnose a nucleic acid detection apparatus 100 sets this diagnostic cassette in the nucleic acid detection apparatus 100 like a nucleic acid detection cassette, and performs electrochemical measurement as in the case with the nucleic acid detection cassette. Determining whether the obtained current value falls within a predetermined variation range can diagnose whether the nucleic acid detection apparatus 100 is normally operating.
As described in the third embodiment, an electrolyte can be used for measurement for diagnosis. When an electrolyte is to be used, the electrolyte functions as not only an electron supply source but also an element having a resistance and a charge capacitance. Diagnosis using an electrolyte can also diagnose a local solution resistance in a region where a working electrode exists and variations in capacitance in addition to diagnosis using no electrolyte, and hence is more preferable. In the case with a capacitor using a silicon substrate, an SiO2 layer, and an electrolyte, a phosphoric acid, hydrochloric acid, sulfuric acid, perchloric acid, sodium hydrate, potassium hydrate, hydrofluoric acid, one of various types of buffer solutions, or the like can be used as an electrolyte. The concentration of the electrolyte desirably falls within the range of 100 nM to 10 M.
Although this embodiment has exemplified the nucleic acid detection, it can be used for diagnosis on a measuring apparatus for electrochemical measurement using a cassette as well as an apparatus for nucleic acid detection.
Although it depends on the type of electrochemical detection, this embodiment can be used for general two-electrode and three-electrode type detection methods. Although not specifically limited, the detection technique can be used for impedance (IMP) measurement and the like by linear sweep voltammetry (LSV), cyclic voltammetry (CV), Tafel plot bulk electrolysis (BE), chronocoulometry (CA), chronopotentiometry (CP), amperometry (i-t), differential pulse amperometry (IPAD), normal pulse voltammetry (NPV), differential pulse voltammetry (DPV), square wave voltammetry (SWV), sweep step function (SSF), multi-potential step (STEP), multi-current step (ISTEP), alternating current voltammetry (ACV), or second-harmonic alternating current voltammetry (SHACV).
Diagnosis was performed by using the diagnostic cassette according to the first embodiment.
Diagnosis was performed by using the diagnostic cassette according to the second embodiment.
Diagnosis was performed by using the diagnostic cassette according to the third embodiment.
In this embodiment, by using the diagnostic cassette 300 attachable to and detachable from the nucleic acid detection apparatus 100 like the nucleic acid detection cassette 200, performing electrochemical measurement similar to that using the nucleic acid detection cassette 200 allows diagnosis of the nucleic acid detection apparatus 100. Therefore, the nucleic acid detection apparatus 100 can be easily diagnosed without any expert skill. In addition, this technique allows easy diagnosis when a nucleic acid test is actually performed, and hence allows quick diagnosis on the nucleic acid detection apparatus 100.
In addition, since the elements 340, counter electrode 350, and reference electrode 360 are arranged in the diagnostic cassette 300 in substantially the same layout as that of the working electrodes 240, counter electrodes 250, and reference electrodes 260 of the nucleic acid detection cassette 200, it is possible to perform more accurate diagnosis in measurement using an electrolyte, reflecting external noise, local concentration variations in the solution, and the magnitude of the solution resistance.
Although the embodiments of the present invention have been described with reference to the views of the accompanying drawing, the present invention is not limited to these embodiments. The embodiments can be variously modified and changed within the spirit and scope of the invention.
Additional advantages and modifications will readily occur to those skilled in the art. Therefore, the invention in its broader aspects is not limited to the specific details and representative embodiments shown and described herein. Accordingly, various modifications may be made without departing from the spirit or scope of the general inventive concept as defined by the appended claims and their equivalents.
Number | Date | Country | Kind |
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2008-202987 | Aug 2008 | JP | national |