Direct sequencing of serum antibodies after infection

Information

  • Research Project
  • 9253986
  • ApplicationId
    9253986
  • Core Project Number
    R43AI129082
  • Full Project Number
    1R43AI129082-01
  • Serial Number
    129082
  • FOA Number
    PA-15-269
  • Sub Project Id
  • Project Start Date
    2/1/2017 - 7 years ago
  • Project End Date
    10/31/2017 - 7 years ago
  • Program Officer Name
    REPIK, PATRICIA M.
  • Budget Start Date
    2/1/2017 - 7 years ago
  • Budget End Date
    10/31/2017 - 7 years ago
  • Fiscal Year
    2017
  • Support Year
    01
  • Suffix
  • Award Notice Date
    1/17/2017 - 8 years ago

Direct sequencing of serum antibodies after infection

Project Summary Monoclonal antibodies (mAbs) are a well-validated drug platform with exquisite specificity, diversity and potency. They offer the lowest-risk class of drug for development through licensure and offer great potential for addressing emerging and re-emerging infectious diseases. To be prepared as threats, like Ebola (EBOV), Marburg (MARV), and Zika viruses, continue to emerge or re-emerge, rapid discovery capabilities are a critical element. One of the best current methods for discovery of potent human mAbs is isolation of peripheral B-cells from survivors/sero-positive individuals for single cell sequencing or hybridoma generation. However, peripheral B-cells are not always easy to obtain and only represent a small percentage of the total B-cell population across all bodily tissues. We have developed an antibody discovery technology in which only serum antibodies are required, i.e. mAb sequences against a given antigen can be sequenced de novo from polyclonal antibody (pAb) pools without the need for sequencing of genetic material. We propose to further refine this novel proteomic approach and apply it towards discovery of new antibodies in serum obtained from EBOV survivors. Here IgGs from survivor plasma will be purified by filovirus glycoprotein antigen specificity and sequenced independently of B-cells. Given our preliminary data, these efforts may yield mAbs that are cross-reactive to ZEBOV, SUDV, BDBV, and possibly MARV. Viable mAbs will ultimately be developed to become pan-EBOV (ZEBOV, SUDV, BDBV) and/or pan-filovirus (EBOV, MARV) therapeutic products. But perhaps the most significant contribution of this work will be to further develop our rapid antibody discovery approach, which may impact drug discovery in nearly all sectors of the mAb industry, including infectious disease.

IC Name
NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES
  • Activity
    R43
  • Administering IC
    AI
  • Application Type
    1
  • Direct Cost Amount
  • Indirect Cost Amount
  • Total Cost
    255046
  • Sub Project Total Cost
  • ARRA Funded
    False
  • CFDA Code
    855
  • Ed Inst. Type
  • Funding ICs
    NIAID:255046\
  • Funding Mechanism
    SBIR-STTR RPGs
  • Study Section
    ZRG1
  • Study Section Name
    Special Emphasis Panel
  • Organization Name
    MAPP BIOPHARMACEUTICAL, INC.
  • Organization Department
  • Organization DUNS
    137551797
  • Organization City
    SAN DIEGO
  • Organization State
    CA
  • Organization Country
    UNITED STATES
  • Organization Zip Code
    921212740
  • Organization District
    UNITED STATES