1. Field of the Invention
The present invention relates to an electrophoresis chip with a channel which separates a desired sample, which contains a plurality of components, into the respective components by isoelectric focusing electrophoresis.
Priority is claimed on Japanese Patent Application No. 2008-201026, filed Aug. 4, 2008, the content of which is incorporated herein by reference.
2. Description of Related Art
In recent years, devices called electrophoresis chips are under development. The electrophoresis chip has a channel therein and separates a sample, such as DNA or protein, within the channel by electrophoresis.
Moreover, there is also an electrophoresis chip which separates a sample, such as DNA or protein, according to the size of the sample by using a groove between the columnar structures formed in the channel. In such an electrophoresis chip, the width of the groove between the columnar structures is almost equal to the size of the sample, such as DNA or protein.
Moreover, there is also an electrophoresis chip which separates a sample, such as protein, by isoelectric focusing electrophoresis. In such an electrophoresis chip, the sample is separated by using the isoelectric points without separating the sample according to the size. For this reason, the width of the groove between the columnar structures does not need to be equal to the size of the sample. The columnar structure of such an electrophoresis chip is formed for the following purpose. For example, the columnar structure is formed to help dissipation of the Joule heat generated during the electrophoresis, to give super-lyophilicity for helping introduction of the sample solution into a channel, to make the sample remain in the channel when the lid is peeled off, or to suppress diffusion of the sample.
In the electrophoresis chip which separates the sample by the isoelectric focusing electrophoresis, however, the drift phenomenon is observed while the isoelectric focusing electrophoresis in which the sample is focused at the isoelectric point is being performed. The drift phenomenon variously changes with the situation of electric charges on the surface of the chip or the contents of the sample. This is the reason why the same observation result cannot be reproduced each time.
For this reason, it is necessary to develop an electrophoresis chip capable of suppressing the drift phenomenon.
Moreover, as a related document there is a document which discloses the technique of accurately performing analysis or separation using a small amount of sample (for example, refer to international publication No. 2005/121767).
In the technique disclosed in international publication No. 2005/121767, the channel of the structure where the edge of a plurality of electrodes to which the AC voltage is applied surrounds the periphery of the main channel, through which a sample existing in a dispersed or floating state in carrier liquid flows together with the carrier liquid, is used. This makes it possible to accurately perform the analysis or separation using a small amount of sample.
Furthermore, there is a document which discloses the technique of operating the flow of fume particles in liquid within a microchannel (for example, refer to JP-A-2004-354364).
In the technique disclosed in JP-A-2004-354364, a channel formed on the substrate is branched into channels at the branch point In addition, blocking materials each of which has a columnar structure are provided and disposed at fixed distances at the branch points of the channels.
Moreover, in
In addition, the point that blocking materials each of which has a columnar structure being disposed at the branch point of the channel and the flow of fine particles being operated is disclosed in JP-A-2004-354364. However, JP-A-2004-354364 does not disclose the point that the flow of the sample solution which moves in a straight line along the longitudinal direction of the channel is disturbed and does not point out the necessity, either.
The invention has been made in view of the above situation, and it is an object of the invention to provide an electrophoresis chip capable of suppressing the drift phenomenon.
In order to achieve the above object, according to an aspect of the invention, an electrophoresis chip includes: a channel which separates a sample by isoelectric focusing electrophoresis; and a plurality of columnar structures disposed all over the channel. The columnar structures are disposed such that the flow of a sample solution, which moves in the longitudinal direction of the channel, is disturbed.
Furthermore, according to another aspect of the invention, an electrophoresis chip includes: a channel which separates a sample by isoelectric focusing electrophoresis; and a plurality of columnar structures disposed all over the channel. Arrays of the columnar structures disposed in a predetermined region within the channel are regularly disposed all over the channel. The columnar structures include a first columnar structure whose position in the channel is expressed as (x1, y1), a second columnar structure whose position in the channel is expressed as (x2, y2), and a third columnar structure whose position in the channel is expressed as (x3, y3) assuming that the longitudinal direction of the channel is an x-axis direction and the width direction of the channel perpendicular to the longitudinal direction of the channel is a y-axis direction. The first to third columnar structures are disposed adjacent to each other. The first and third columnar structures are disposed before the second columnar structure in the x-axis direction such that x1<x2 and x3<x2 are satisfied. The second columnar structure is disposed between the first and third columnar structures in the y-axis direction such that y1<y2<y3 is satisfied.
As a result, it becomes possible to suppress the drift phenomenon.
First the outline of all electrophoresis chip of the present embodiment will be described with reference to
The electrophoresis chip of the present embodiment has a channel 233 for separating a sample by isoelectric focusing electrophoresis, as shown in
As shown in
Moreover, in the electrophoresis chip of the present embodiment, arrays of the columnar structures shown in the
First, the configuration of the electrophoresis chip of the present embodiment will be described with reference to
The electrophoresis chip in the present embodiment has a substrate 236 and a lid 235. The channel 233 is formed in the substrate 236. Liquid reservoirs 239 and 240 are formed at both ends of the channel 233. The channel 233 communicates with the liquid reservoirs 239 and 240. In addition, the liquid reservoirs 239 and 240 have electrodes (not shown) formed by insertion of the platinum line (not shown).
In the columnar structure arrangement shown in FIG, 3, grooves between the columnar structures are formed in a straight line in the longitudinal direction A1 of the channel. Accordingly, the grooves are disposed such that it is difficult to disturb the flow of the sample solution in the longitudinal direction A1 of the channel. Actually, the speed at which the sample solution moved to the inside of the channel was almost twice the speed in the case of the columnar structure arrangement shown in
In the columnar structure arrangement shown in
In cases of the columnar structure arrangements shown in
Thus, in the case of the columnar structure arrangement shown in the
In addition, the columnar structure arrangement in which it is difficult to disturb the flow of the sample solution in the longitudinal direction A1 of the channel means that the columnar structures are disposed such that the view is made worse in the longitudinal direction A1 of the channel or that the grooves on the root bypassing the columnar structures which disturb the flow are also formed narrow, for example. Here, ‘narrow’ means that the length of the groove between the columnar structures is 50 μm or less.
Moreover, in the present embodiment, the columnar structure arrangement shown in FIG, 4 which is easy to be compared with the columnar structure arrangement shown in
For example, the columnar structure arrangement shown in
In addition, the columnar structure arrangements shown in
In
Moreover, in
Moreover, in
In the columnar structure arrangement of the present embodiment, when the columnar structures 100a are not disposed in the shape of a checkerboard unlike
In addition, when the columnar structure arrays are disposed within the channel 233, it is preferable that the columnar structure arrays disposed in a region within the predetermined channel 233 be regularly disposed all over the channel 233 as shown in
In
In
For this reason, in the cases of the columnar structure arrangements shown in
The surface which is in contact with the sample solution within the channel 233 is preferably lyophilic for the sample solution. In this case, it becomes possible to realize the columnar structure arrangement in which it is difficult to disturb the flow of the sample solution in the longitudinal direction A1 of the channel while making the solution easily introduced into the channel 233.
The surface which is in contact with the sample solution within the channel 233 is more preferably super-lyophilic for the sample solution. In this case, it becomes possible to realize the columnar structure arrangement in which it is difficult to disturb the flow of the sample solution in the longitudinal direction A1 of the channel while making the solution more easily introduced into the channel 233.
For example, quartz glass is used as a material of the substrate 236. Since the surface of the substrate 236 has lyophilicity by the quartz glass, the channel 233 can be appropriately formed. In addition, glass, such as Pyrex (registered trademark), a plastic material, or the like may be used as materials of the substrate 236. Examples of the plastic material include thermoplastic resins, such as a silicon rest, PMMA (polymethyl methacrylate), PET (polyethylene terephthalate), and PC (polycarbonate), and thermosetting resins, such as an epoxy resin. Since such materials are easy molded, manufacturing cost can be suppressed. In addition, it is also possible to use metal for the substrate 236.
Moreover, the columnar structures formed in the channel 233 may be formed, for example, by etching the substrate 236 in a predetermined pattern shape. In addition, the manufacturing method when forming the columnar structures in the channel 233 is not particularly limited, and any method may be applied.
Moreover, the shape of the columnar structure of the present embodiment is riot particularly limited. For example, the shape of the columnar structure is not limited to the pseudo-cylindrical shape, such as a cylinder and an elliptical cylinder, and cones such as a circular cone and an elliptical cone, polygonal columns such as a triangular prism and a quadrangular prism, and columns having other cross-sectional shapes may also be applied. In this case, in order to accurately control the flow of fine particles, the column is more preferable than the cone.
Moreover, as for the size of the columnar structure of the present embodiment, it is preferable that the width of the columnar structure be about 10 nm to 10 μm, for example. In addition, it is preferable that the width of the groove between the columnar structures be appropriately selected according to the shape and size of the fine particle flowing into the channel 233. In addition, the width of the groove between the columnar structures is preferably 10 or more times the molecular size of a component included in a sample solution. For example, the size of peptide or protein separated by isoelectric focusing electrophoresis is about 20 nm in general even if it is large. In this case, it is preferable that the width of the groove between the columnar structures be at least 200 nm, or more. Thus, it becomes possible to suppress the flow of the sample solution without the sample solution being disturbed. In addition, the width of the groove between the columnar structures means the width of the groove in the width direction B1 of the channel, and the length of the groove between the columnar structures means the length of the groove in the longitudinal direction A1 of the channel.
Moreover, it is preferable that the upper surface of each columnar structure be built to match the upper surface of the channel within ±3 nm. This makes it possible to keep the sample solution from easily flowing between the lid 235 of the upper surface of the channel 233 and the upper surface of the columnar structure.
Next, a method of manufacturing the electrophoresis chip of the present embodiment will be described. In addition, the channel 233 and the columnar structures can be formed on the substrate 236, for example, by etching the substrate 236 in the predetermined pattern shape. However, the manufacturing method is not particularly limited, and any method may be applied.
For example, they may be manufactured by using photolithography using a thick-film resist for microfabrication. The thick-film resist is used as a negative resist for photolithography and may be appropriately used as a resist for microfabrication of a micrometer scale.
First, a water repellent layer (not shown) and a thick resist layer are sequentially formed on the substrate 236. The thickness of the water repellent layer is 400 nm, and the thickness of the thick resist layer is 10 μm. Then, a pattern on the chip, such as a columnar structure pattern, is exposed using the exposure device. Development is performed using a developer. By this process, the thick-film resist is patterned.
Then, the water repellent layer and the glass substrate are removed by dry etching using a resist mask and the mixed gas of CF4 and CHF3. The remaining photoresist is removed by peeling liquid, and then the resist which still remains is Removed by plasma oxidation treatment. As a result, the channel 233 and columnar structures are formed on the substrate 236.
Here, coating treatment for promoting the lyophilicity of the surface of the substrate 236 is performed By making the surface of the substrate 236 lyophilic, the sample solution is smoothly introduced into the channel 233 or the columnar structures. Particularly by the columnar structures, introduction of the sample solution based on the capillary phenomenon of is promoted. As a result, the flow operation precision can be improved.
Then, for example, the region where the glass surface of the surface of the substrate 236 is exposed, that is, an inner wall and a bottom surface of the etched channel 233 and side walls of the, columnar structures are coated with a linear polyacrylamide film after the etching process. That is, the linear polyacrylamide film is formed by performing the silane coupling process and then polymerizing the linear polyacrylamide while making the linear polyacrylamide react with the silane coupling agent on the surface. The linear polyacrylamide film is effective in maintaining the hydrophilic property for a long time and suppressing adsorption of protein or the like. In addition, the surface of the substrate 236 which is not etched, such as the outside of the channel 233, shows the water repellent property because the water repellent layer remains on the surface. Accordingly, the liquid is difficult to leak to the outside of the channel 233. Finally, the silicon rubber lid 235 with the self-adhesive property is bonded to the substrate 236 while being aligned with the substrate 236. Thus, the electrophoresis chip is completed.
Moreover, when a plastic material is used for the substrate 236, the known methods suitable for the type of the material of the substrate 236, which include etching or press molding using a die, such as embossing molding, injection molding, and photo-curable formation, is applied.
Also when the plastic material is used for the substrate 236, it is preferable to make the surface of the substrate 236 lyophilic. By making the surface of the substrate 236 lyophilic, the sample solution is smoothly introduced into the channel 233 or the region where the columnar structures are formed.
As surface treatment for lyophilicity, for example, a process of covalently binding a linear polyacrylamide film or a polyethylene glycol film on the surface by silane coupling is performed.
In addition, the electrophoresis chip of the present embodiment may be easily manufactured by applying the microfabrication technology used for manufacture of MEMS (Micro Electro Mechanical Systems) or semiconductor devices. In addition, press machining, sandblasting, or the like may also be applied.
In addition, in the isoelectric focusing electrophoresis, the channel 233 communicates with the liquid reservoirs 239 and 240. Preferably, the columnar structures of the present embodiment are provided on the entire bottom surfaces of the liquid reservoirs 239 and 240 or parts of the bottom surfaces adjacent to the channel 233 and in the entire region from a channel portion adjacent to one liquid reservoir 239 to a channel portion adjacent to the other liquid reservoir 240. This is because the isoelectric focusing electrophoresis and the drift phenomenon occur in the liquid reservoirs 239 and 240 and the channel 233 which communicates therewith. Therefore, it is preferable that the columnar structures of the present embodiment be disposed all over the channel 233.
Thus, according to the present embodiment, the plurality of columnar structures disposed in the channel 233 is disposed such that the flow of the sample solution, which moves in a straight line along the longitudinal direction of the channel 233, is disturbed as shown in
While preferred embodiments of the invention have been described and illustrated above, it should be understood that these are exemplary of the invention and are not to be considered as limiting. Additions, omissions, substitutions, and other modifications can be made without departing from the spirit or scope of the present invention. Accordingly, the invention is not to be considered as being limited by the foregoing description, and is only limited by the scope of the appended claims.
Number | Date | Country | Kind |
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P2008-201026 | Aug 2008 | JP | national |