FIELD OF THE INVENTION
The teachings herein relate to methods of augmenting the regenerative activity of mesenchymal stem cells by contacting and mixing said mesenchymal stem cells with one or more inhibitors of mammalian target of rapamycin.
BACKGROUND OF THE INVENTION
Stem cell therapy offers the possibility of regenerative medicine, which conceptually can revolutionize the treatment of chronic disease. Mesenchymal stem cells (MSC) are a clinical grade regenerative cell population which has been demonstrated to possess therapeutic effects in a wide variety of inflammatory and degenerative conditions. MSC have been derived from tissue selected from the group consisting of the placenta, cord blood, Wharton's Jelly, menstrual blood, endometrium, skin, omentum, amniotic fluid, adipose tissue, bone marrow, umbilical cord tissue, peripheral blood, hair follicle, and a mixture thereof.
Unfortunately, despite the therapeutic promise of MSC, numerous clinical trials have failed, in part due to lack of sufficient therapeutic efficacy of said cells. In the current disclosure we provide novel means of enhancing MSC activity through the use inhibitors of mTOR such as rapamycin. Rapamycin (sirolimus, RAPA) is a bacterial macrolide that forms a complex with FK-binding protein (FKBP-12) that in turn binds to the mammalian target of rapamycin (mTOR) with high affinity.
SUMMARY
Preferred methods herein are directed to augmenting regenerative activity of mesenchymal stem cells comprising contacting/mixing said mesenchymal stem cell with one or more inhibitors of mammalian target of rapamycin (mTOR).
Preferred methods include embodiments wherein said mesenchymal stem cells express markers selected from a group comprising of: a) CD90; b) CD105 and c) CD74.
Preferred methods include embodiments wherein said mesenchymal stem cells lack expression of markers selected from a group comprising of: a) CD14; b) CD45 and c) CD34.
Preferred methods include embodiments wherein said mesenchymal stem cells are plastic adherent.
Preferred methods include embodiments wherein said mesenchymal stem cells are selected from a group of tissues comprising of: a) bone marrow b) placenta; c) menstrual blood; d) peripheral blood; e) adipose tissue; f) umbilical cord blood; g) Wharton's jelly; and h) fallopian tube.
Preferred methods include embodiments wherein said peripheral blood is drawn after subject is treated with one or more agents capable of mobilizing bone marrow derived mesenchymal stem cells.
Preferred methods include embodiments wherein said mobilizing agent is G-CSF.
Preferred methods include embodiments wherein said mobilizing agent is GM-CSF.
Preferred methods include embodiments wherein said mobilizing agent is M-CSF.
Preferred methods include embodiments wherein said mobilizing agent is FLT-3 ligand.
Preferred methods include embodiments wherein said mobilizing agent is Mozabil™.
Preferred methods include embodiments wherein said regenerative activity is angiogenesis.
Preferred methods include embodiments wherein said angiogenesis is production of new blood vessels, which restore circulation to an area of ischemia.
Preferred methods include embodiments wherein said angiogenesis is associated with activation of matrix metalloproteases.
Preferred methods include embodiments wherein said angiogenesis is associated with activation of endothelial cell migration.
Preferred methods include embodiments wherein said angiogenesis is associated with formation of tubules comprising of endothelial cells and pericytes.
Preferred methods include embodiments, wherein said angiogenesis is associated with activation of macrophages possessing the M2 phenotype.
Preferred methods include embodiments wherein said M2 macrophages possess a suppressed expression of inducible nitric oxide synthase as compared to a naïve macrophage.
Preferred methods include embodiments wherein said M2 macrophages possess an enhanced expression of arginase as compared to a naïve macrophage.
Preferred methods include embodiments wherein said M2 macrophages possess an enhanced expression of indolamine 2,3-deoxygenase as compared to a naïve macrophage.
Preferred methods include embodiments wherein said angiogenesis is associated with enhanced production of VEGF.
Preferred methods include embodiments wherein said angiogenesis is associated with enhanced production of SDF-1.
Preferred methods include embodiments wherein said angiogenesis is associated with enhanced production of FGF-1.
Preferred methods include embodiments wherein said angiogenesis is associated with enhanced production of FGF-2.
Preferred methods include embodiments wherein said angiogenesis is associated with enhanced production of FGF-5.
Preferred methods include embodiments wherein said angiogenesis is associated with enhanced production of HGF-1.
Preferred methods include embodiments wherein said angiogenesis is enhanced in response to induction of HIF-1 alpha translocation.
Preferred methods include embodiments wherein said angiogenesis is utilized to accelerate healing.
Preferred methods include embodiments wherein said angiogenesis is further enhanced by culture of cells in the presence of an inhibitor of ROCK.
Preferred methods include embodiments wherein said angiogenesis is further enhanced by culture of cells in the presence of an acidic environment.
Preferred methods include embodiments wherein said angiogenesis is further enhanced by culture of cells in the presence of a hypoxic environment.
Preferred methods include embodiments wherein said angiogenesis is further enhanced by culture of cells in the presence of 5-azacytidine.
Preferred methods include embodiments wherein said angiogenesis is further enhanced by culture of cells in the presence of trichostatin-A.
Preferred methods include embodiments wherein said angiogenesis is further enhanced by culture of cells in the presence of PDGF-BB.
Preferred methods include embodiments wherein said angiogenesis is further enhanced by culture of cells in the presence of PDGF-AA.
Preferred methods include embodiments wherein said angiogenesis is further enhanced by culture of cells in the presence of EGF.
Preferred methods include embodiments wherein said angiogenesis is further enhanced by culture of cells in the presence of IGF.
Preferred methods include embodiments wherein said angiogenesis is further enhanced by culture of cells in the presence of TGF-beta.
Preferred methods include embodiments wherein said angiogenesis is further enhanced by culture of cells in the presence of monocyte conditioned media.
Preferred methods include embodiments wherein said angiogenesis is further enhanced by culture of cells in the presence of dopamine.
Preferred methods include embodiments wherein said regenerative activity is suppression of inflammatory activity.
Preferred methods include embodiments wherein suppression of inflammatory activity is inhibition of NF-kappa B translocation.
Preferred methods include embodiments wherein suppression of inflammatory activity is inhibition of dendritic cell maturation.
Preferred methods include embodiments wherein said dendritic cell maturation is ability to stimulate activation of a naïve T cell.
Preferred methods include embodiments wherein said dendritic cell maturation is ability to stimulate activation of cytokine production in a naïve T cell.
Preferred methods include embodiments wherein said dendritic cell maturation is ability to stimulate cytotoxic activity from a naïve T cell.
Preferred methods include embodiments wherein said dendritic cell maturation is ability to stimulate immunological memory.
Preferred methods include embodiments wherein suppression of inflammatory activity is inhibition of TNF-alpha production.
Preferred methods include embodiments wherein suppression of inflammatory activity is inhibition of interleukin-1 production.
Preferred methods include embodiments wherein suppression of inflammatory activity is inhibition of interleukin-6 production.
Preferred methods include embodiments wherein suppression of inflammatory activity is inhibition of interleukin-8 production.
Preferred methods include embodiments wherein suppression of inflammatory activity is inhibition of interleukin-17 production.
Preferred methods include embodiments wherein said regenerative activity is stimulation of neurogenesis.
Preferred methods include embodiments wherein said regenerative activity is prevention of apoptotic death of cells surrounding administered mesenchymal stem cells.
Preferred methods include embodiments wherein said regenerative activity is stimulation of endogenous progenitor cells.
Preferred methods include embodiments wherein said mTOR inhibitor is rapamycin.
Preferred methods include embodiments wherein said mTOR inhibitor is everolimus.
Preferred methods include embodiments wherein said mTOR inhibitor is ridaforolimus.
BRIEF DESCRIPTION OF THE DRAWINGS
FIG. 1 is a line graph showing Hepatocyte Growth Factor (HGF-1) expression based on different concentrations of rapamycin
DETAILED DESCRIPTION OF THE INVENTION
The invention teaches that administration of mTOR inhibitors, such as rapamycin, to mesenchymal stem cells, allows for the generation of enhanced therapeutic activity.
The invention demonstrates that administration of rapamycin, one type of mTOR inhibitor, leads to upregulation of hepatocyte growth factor (HGF-1) production. As used herein, “mTOR inhibitor” refers to any agent that inhibits signaling of mTOR. An mTOR inhibitor is preferably water-soluble. This is because, unless an mTOR inhibitor is water-soluble, it may be necessary to use a solvent that is not highly biocompatible. Water-solubility can be classified based on the definition of solubility in the pharmacopoeia. In other words, the amount of solvent required to dissolve 1 g or 1 mL of solute is defined as extremely readily dissolvable: less than 1 mL; readily dissolvable: 1 mL or greater and less than 10 mL; somewhat readily dissolvable: 10 mL or greater and less than 30 mL; somewhat difficult to dissolve: 30 mL or greater and less than 100 mL; difficult to dissolve: 100 mL or greater and less than 1000 mL; very difficult to dissolve: 1000 mL or greater and less than 10000 mL; and hardly dissolvable: 10000 mL or greater.
The invention teaches that regenerative activities of MSC, which are desired to be upregulated by the teachings of the current invention, are production of growth factors, stimulation of angiogenesis, stimulation of neurogenesis, suppression of inflammation, stimulation of endogenous regenerative cells, enhancement of endothelial reactivity, and prevention of apoptosis. In one embodiment, wherein production of growth factors by MSC are assessed before and after treatment with mTOR inhibitors is disclosed in the current invention. Said growth factors of interest for the purpose of the invention include numerous proteins and peptides which are known to be therapeutic including but not necessarily limited to BLC, Eotaxin-1, Eotaxin-2, G-CSF, GM-CSF, I-309, ICAM-1, IL-1 ra, IL-2, IL-4, IL-5, IL-6 sR, IL-7, IL-10, IL-13, IL-16, MCP-1, M-CSF, MIG, MIP-1 alpha, MIP-1 beta, MIP-1 delta, PDGF-BB, RANTES, TIMP-1, TIMP-2, TNF alpha, TNF beta, sTNFRI, sTNFRIIAR, BDNF, bFGF, BMP-4, BMP-5, BMP-7, b-NGF, EGF, EGFR, EG-VEGF, FGF-4, FGF-7, GDF-15, GDNF, Growth Hormone, HB-EGF, HGF, IGFBP-1, IGFBP-2, IGFBP-3, IGFBP-4, IGFBP-6, IGF-1, Insulin, M-CSF R, NGF R, NT-3, NT-4, Osteoprotegerin, PDGF-AA, PIGF, SCF, SCF R, TGFalpha, TGF beta 1, TGF beta 3, VEGF, VEGFR2, VEGFR3, VEGF-D 6Ckine, Axl, BTC, CCL28, CTACK, CXCL16, ENA-78, Eotaxin-3, GCP-2, GRO, HCC-1, HCC-4, IL-9, IL-17F, IL-18 BPa, IL-28A, IL-29, IL-31, IP-10, I-TAC, LIF, Light, Lymphotactin, MCP-2, MCP-3, MCP-4, MDC, MIF, MIP-3 alpha, MIP-3 beta, MPIF-1, MSPalpha, NAP-2, Osteopontin, PARC, PF4, SDF-1 alpha, TARC, TECK, TSLP 4-1BB, ALCAM, B7-1, BCMA, CD14, CD30, CD40 Ligand, CEACAM-1, DR6, Dtk, Endoglin, ErbB3, E-Selectin, Fas, Flt-3L, GITR, HVEM, ICAM-3, IL-1 R4, IL-1 RI, IL-10 Rbeta, IL-17R, IL-2Rgamma, IL-21R, LIMPII, Lipocalin-2, L-Selectin, LYVE-1, MICA, MICB, NRG1-beta1, PDGF Rbeta, PECAM-1, RAGE, TIM-1, TRAIL R3, Trappin-2, uPAR, VCAM-1, XEDARActivin A, AgRP, Angiogenin, Angiopoietin 1, Catheprin S, CD40, Cripto-1, DAN, DKK-1, E-Cadherin, EpCAM, Fas Ligand, Fcg RIIB/C, Follistatin, Galectin-7, ICAM-2, IL-13 R1, IL-13R2, IL-17B, IL-2 Ra, IL-2 Rb, IL-23, LAP, NrCAM, PAI-1, PDGF-AB, Resistin, SDF-1 beta, sgp130, ShhN, Siglec-5, ST2, TGF beta 2, Tie-2, TPO, TRAIL R4, TREM-1, VEGF-C, VEGFR1Adiponectin, Adipsin, AFP, ANGPTL4, B2M, BCAM, CA125, CA15-3, CEA, CRP, ErbB2, Follistatin, FSH, GRO alpha, beta HCG, IGF-1 sR, IL-1 sRII, IL-3, IL-18 Rb, IL-21, Leptin, MMP-1, MMP-2, MMP-3, MMP-8, MMP-9, MMP-10, MMP-13, NCAM-1, Nidogen-1, NSE, OSM, Procalcitonin, Prolactin, PSA, Siglec-9, TACE, Thyroglobulin, TIMP-4, TSH2B4, ADAM-9, Angiopoietin 2, APRIL, BMP-2, BMP-9, C5a, Cathepsin L, CD200, CD97, Chemerin, DcR3, FABP2, FAP, FGF-19, Galectin-3, HGF R, IFN-gammalpha/beta ?R2, IGF-2, IGF-2 R, IL-1R6, IL-24, IL-33, Kallikrein 14, Legumain, LOX-1, MBL, Neprilysin, Notch-1, NOV, Osteoactivin, PD-1, PGRP-5, Serpin A4, sFRP-3, Thrombomodulin, TLR2, TRAIL R1, Transferrin, WIF-1ACE-2, Albumin, AMICA, Angiopoietin 4, BAFF, CA19-9, CD163, Clusterin, CRTAM, CXCL14, Cystatin C, Decorin, Dkk-3, DLL1, Fetuin A, aFGF, FOLR1, Furin, GASP-1, GASP-2, GCSF R, HAI-2, IL-17B R, IL-27, LAG-3, LDL R, Pepsinogen I, RBP4, SOST, Syndecan-1, TACI, TFPI, TSP-1, TRAIL R2, TRANCE, Troponin I, uPA, VE-Cadherin, WISP-1, and RANK.
In some specific embodiments, specific growth factors are of interest. We will discuss some growth factors for the purpose of assisting one of skill in the art in the practice of the invention. In one embodiment, the enhancement of hepatocyte growth factor (HGF) is desired. HGF has been demonstrated to support generation of immune regulatory cells termed T regulatory cells, which are capable of suppressing various types of inflammation and autoimmunity [1-6]. The potency of HGF acting as an immune modulator is observed in a study in which neutralization of this cytokine resulted in abrogation of several of the therapeutic effects of mesenchymal stem cells (MSC). In the study, MSCs were added to the upper chambers of cell culture inserts, and CD4+ T cells were plated in the lower chambers, followed by treatment with LPS or an anti-HGF antibody. Th17 and Treg cell frequencies were analyzed by flow cytometry, and the expression of Th17 cell- and Treg cell-related cytokines in the CD4+ T cells or culture medium was measured by quantitative PCR (qPCR) and enzyme-linked immunosorbent assay (ELISA), respectively. Neutrophil functions were determined by flow cytometry after a co-culture with Th17/Treg cells. It was found that co-culture with MSC resulted in an increase in Treg and decrease in Th17, which has significantly been inhibited by the anti-HGF antibody. MSCs significantly inhibited the CD4+ T cell expression of IL-17 and IL-6 but increased the expression of IL-10, which was inhibited by the anti-HGF antibody. Additionally, CD4+ T cells co-cultured with MSCs significantly inhibited neutrophil phagocytic and oxidative burst activities and these MSC-induced effects were inhibited by the anti-HGF antibody [7]. Other therapeutic properties of HGF include: stimulation of liver regeneration [8-10], stimulation of renal tubular epithelial cell proliferation [11, 12], enhancement of recovery of renal function after injury [13-24], stimulation of keratinocyte growth [25], stimulation of angiogenesis [26-46], inhibition of cancer cell proliferation [47-54], stimulation of hematopoiesis [55-63], enhancement of B cell activity [64], stimulation of bronchial epithelial cell growth [65, 66], stimulation of type 2 alveolar epithelial cells [67-72], inhibitory of epithelial cell apoptosis [70, 73, 74], stimulation of lung healing [75-80], reduction of pulmonary fibrosis [81-84], enhancement of pancreatic regeneration [85-90], promotion of survival of neurons [91-95], promotion of axonal growth [96], reduction of stroke size and acceleration of recovery [97-99], suppression of neuronal death [100-102], increases brain hypoperfusion [103], inhibits progression of neurodegenerative diseases [104-106], generates more oligodendrocytes [107], attenuates ischemia associated learning dysfunction [108, 109], enhances synaptic plasticity [110], stimulation of neuronal migration [111], stimulation of synaptic localization of receptors [112], activation of muscle satellite cells [113-116], accelerates reconstitution of intestinal epithelial cells [117], accelerate post cardiac infarct recovery [118-134], suppresses cardiomyopathy [135-138], inhibits autoimmune myocarditis [139], reduces endothelial cell injury [140], reduces graft versus host disease [141], improves efficacy of islet transplantation [142-144], restoration of hearing impairment [145, 146], suppression of inflammatory bowel disease [147-150], protects against blindness [151-153], stimulates production of interleukin 1 receptor antagonist [154], accelerates fracture repair [155], suppresses dendritic cell activation/generates tolerogenic dendritic cells [1, 156], promotes recovery after spinal cord injury [157], suppresses autoimmune arthritis [158], and vocal fold scarring [159].
An mTOR (mammalian target of rapamycin) is a serine/threonine kinase identified as a target molecule of rapamycin and is considered to play a central role in the adjustment of cell division, survival and the like. An mTOR is also known as SKS; FRAP; FRAP1; FRAP2; RAFT1; RAPT1, and 2475 is given as a Gene ID of NCBI. Based on such information, those skilled in the art can design and manufacture various mTOR inhibitors.
For the purpose of treatment of MSC, the mTOR inhibitors that can be used in the present invention are not particularly limited, as long as they are compounds having mTOR inhibiting activity. Examples thereof include, rapamycin, temsirolimus, everolimus, PI-103, CC-223, INK128, AZD8055, KU 0063794, Voxtalisib (XL765, SAR245409), Ridaforolimus (Deforolimus, MK-8669), NVP-BEZ235, CZ415, Torkinib (PP242), Torin 1, Omipalisib (GSK2126458, GSK458), OSI-027, PF-04691502, Apitolisib (GDC-0980, RG7422), WYE-354, Vistusertib (AZD2014), Torin 2, Tacrolimus (FK506), GSK1059615, Gedatolisib (PF-05212384, PKI-587), WYE-125132 (WYE-132), BGT226 (NVP-BGT226), Palomid 529 (P529), PP121, WYE-687, CH5132799, WAY-600, ETP-46464, GDC-0349, XL388, Zotarolimus (ABT-578), and Chrysophanic Acid. Preferred mTOR inhibitors include, but are not limited to, rapamycin, temsirolimus and everolimus. Although not wishing to be bound by any theory, this is because these pharmaceutical products are approved by FDA, PMDA, and the like and problems in the aspects of safety and toxicity are minimized. An ever more preferable mTOR inhibitor is rapamycin. Another preferable mTOR inhibitor is temsirolimus. Another preferable mTOR inhibitor is, but is not limited to, everolimus.
Other examples of mTOR inhibitors that can be used in the present invention include neutralizing antibodies against mTORs, compounds inhibiting the activity of mTORs, compounds inhibiting the transcription of a gene encoding an mTOR (e.g., antisense nucleic acids, siRNAs, and ribozymes), peptides, and various compounds. Antisense nucleic acids used in the present invention may inhibit the expression and/or function of a gene (nucleic acids) encoding a member of a signaling pathway of an mTOR or the like by any of the above-described actions. As one embodiment, designing an antisense sequence complementary to an untranslated region near the 5′ end of mRNA of a gene encoding the aforementioned mTOR is considered effective for inhibiting translation of a gene. Further, a sequence that is complementary to an untranslated region of 3′ or a coding region can also be used. In this manner, antisense nucleic acids utilized in the present invention include not only a translation region of a gene encoding the aforementioned mTOR or the like, but also nucleic acids comprising an antisense sequence of a sequence of an untranslated region. An antisense nucleic acid to be used is linked to the downstream of a suitable promoter, and preferably a sequence comprising a transcription termination signal is linked to the 3′ side. A nucleic acid prepared in this manner can be transformed into a desired animal (cell) by using a known method. A sequence of an antisense nucleic acid is preferably a sequence that is complementary to a gene encoding an mTOR of the animal (cell) to be transformed or a portion thereof. However, such a sequence does not need to be fully complementary, as long as gene expression can be effectively suppressed. A transcribed RNA preferably has complementarity that is 90% or greater, and most preferably 95% or greater, with respect to a transcript of a target gene. In order to effectively inhibit the expression of a target gene using an antisense nucleic acid, it is preferable that the length of the antisense nucleic acid is at least 12 bases and less than 25 bases. However, the antisense nucleic acid of the present invention is not necessarily limited to this length. For example, the length may be 11 bases or less, 100 bases or more, or 500 bases or more. An antisense nucleic acid may be composed of only DNA, but may comprise a nucleic acid other than DNAs, such as a locked nucleic acid (LNA). As one embodiment, an antisense nucleic acid used in the present invention may be an LNA containing antisense nucleic acid comprising LNA at the 5′ end or LNA at the 3′ end
Expression of mTOR can also be inhibited by utilizing a ribozyme or DNA encoding a ribozyme. A ribozyme refers to an RNA molecule having catalytic activity. While there are ribozymes with various activities, a study focusing on especially ribozymes as an enzyme for cleaving an RNA made it possible to design a ribozyme that site-specifically cleaves an RNA. There are ribozymes with a size of 400 nucleotides or more as in group I intron ribozymes and M1 RNA contained in RNase P, but there are also those with an active domain of about 40 nucleotides called hammerhead or hair-pin ribozymes.
Expression of an endogenous gene of an mTOR can also be suppressed by RNA interference (hereinafter, abbreviated as “RNAi”) using a double-stranded RNA having a sequence that is identical or similar to a target gene sequence. RNAi is a methodology that is currently drawing attention. The RNAi methodology can suppress the expression of a gene having a sequence that is homologous to a double-stranded RNA (dsRNA) when the dsRNA is incorporated directly into a cell. In mammalian cells, short stranded dsRNA (siRNA) can be used to induce RNAi. RNAi has many advantages over knockout mice, such as a stable effect, facilitated experiment, and low cost. SiRNA is discussed in detail in other parts of the specification.
As used herein “siRNA” is an RNA molecule having a double-stranded RNA portion consisting of 15 to 40 bases, where siRNA has a function of cleaving mRNA of a target gene with a sequence complementary to an antisense strand of the siRNA to suppress the expression of the target gene. Specifically, the siRNA in the present invention is an RNA comprising a double-stranded RNA portion consisting of a sense RNA strand consisting of a sequence homologous to consecutive RNA sequences in mRNA of mTOR and an antisense RNA strand consisting of a sequence complementary to the sense RNA sequence. Design and manufacture of such siRNA and mutant siRNA discussed below are within the technical competence of those skilled in the art. Any consecutive RNA regions of mRNA which is a transcript of a sequence of mTOR can be appropriately selected to make double-stranded RNA corresponding to this region, which is within the ordinary procedure performed by those skilled in the art. Further, those skilled in the art can appropriately select a siRNA sequence having a stronger RNAi effect from mRNA sequences, which are transcripts of the sequence, by a known method. Further, if one of the strands is revealed, those skilled in the art can readily find the base sequence of the other stand (complementary strand). SiRNA can be appropriately made by using a commercially available nucleic acid synthesizer. A common synthesis service can also be utilized for desired RNA synthesis.
In terms of bases, the length of a double-stranded RNA portion is 15 to 40 bases, preferably 15 to 30 bases, more preferably 15 to 25 bases, still more preferably 18 to 23 bases, and most preferably 19 to 21 bases. It is understood that the upper limits and the lower limits thereof are not limited to such specific limits, and may be of any combination of the mentioned limits. The end structure of a sense strand or antisense strand of siRNA is not particularly limited, and can be appropriately selected in accordance with the objective. For example, such an end structure may have a blunt end or a sticky end (overhang). A type where the 3′ end protrudes out is preferred. SiRNA having an overhang consisting of several bases, preferably 1 to 3 bases, and more preferably 2 bases at the 3′ end of a sense RNA strand and antisense RNA strand is preferable for having a large effect of suppressing expression of a target gene in many cases. The type of bases of an overhang is not particularly limited, which may be either a base constituting a RNA or a base constituting a DNA. An example of a preferred overhang sequence includes dTdT at the 3′ end (2 bp of deoxy T) and the like. Examples of preferable siRNA include, but are not limited to, all siRNAs with dTdT (2 bp of deoxy T) at the 3′ end of the sense or antisense strands of the siRNA.
Furthermore, it is also possible to use siRNA in which one to several nucleotides are deleted, substituted, inserted and/or added at one or both of the sense strand and antisense strand of the siRNA described above. One to several bases as used herein is not particularly limited, but preferably refers to 1 to 4 bases, more preferably 1 to bases, and most preferably 1 to 2 bases. Specific examples of such mutations include, but are not limited to, mutations resulting in 0 to 3 bases at the 3′-overhang portion, mutations that change the base sequence of the 3′-overhang portion to another base sequence, mutations in which the lengths of the above-described sense RNA strand and antisense RNA strand are different by 1 to 3 bases due to insertion, addition or deletion of bases, mutations substituting a base in the sense strand and/or the antisense with another base, and the like. However, it is necessary that the sense strand and the antisense strand can hybridize in such mutant siRNAs, and these mutant siRNAs have the ability to suppress gene expression that is equivalent to that of siRNAs without any mutations.
siRNA may also be a molecule with a structure in which one end is closed, such as siRNA with a hairpin structure (Short Hairpin RNA; shRNA). A shRNA is an RNA comprising a sense strand RNA with a specific sequence of a target gene, an antisense strand RNA consisting of a sequence complementary to the sense strand sequence, and a linker sequence for connecting the two strands, wherein the sense strand portion hybridizes with the antisense strand portion to form a double-stranded RNA portion.
It is desirable for siRNA to not exhibit the so-called off-target effect in clinical use. An off-target effect refers to an action for suppressing the expression of another gene, besides the target gene, which is partially homologous to the siRNA used. In order to avoid an off-target effect, it is possible to confirm that a candidate siRNA does not have cross reactivity by determining if there are DNA strands which could react with siRNA by using a DNA microarray or the like in advance. Further, it is possible to avoid an off-target effect by confirming whether there is a gene comprising a moiety that is highly homologous to a sequence of a candidate siRNA, other than a target gene, using a known database provided by the NCBI (National Center for Biotechnology Information) or the like.
EXAMPLE 1
Bone marrow MSCs were purchased from American Type Culture Collection (hereinafter, “ATCC”) and grown in DMEM media with 10% fetal calf serum. Cells were allowed to expand to 100% confluence. The media was subsequently washed with phosphate buffered saline (PBS). Cells were plated on 96 well plates and cultured in the presence of the indicated concentrations of rapamycin for the indicated time points. Hepatocyte Growth Factor (HGF-1) expression was assessed using ELISA (R&D Systems). A significant increase in production of HGF-1 was observed in response to rapamycin treatment as shown in FIG. 1
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