Patent Application
20230380448
This application contains a Sequence Listing in computer readable form, which is incorporated herein by reference.
Anti-oxidative enzymes for preserving animal feed or an animal feed additive or for preventing the oxidative degradation of probiotic microbials in animal feed.
Reactive oxygen species (ROS) are reactive chemicals formed from O2 and include hydrogen peroxide and superoxide. ROS can be formed from oxygen as a metabolic/respiratory byproduct or by other factors such as heat, radiation (UV, ionizing), drought, salinity, chilling, defense of pathogens, nutrient deficiency, metal toxicity, toxins, xenobiotics, and pollutants. ROS can cause damage to DNA, lipids/fats, proteins and vitamins. If exposed to too high levels of ROS, a cell undergoes necrosis or triggers apoptosis.
WO 2104/014860 discloses an antioxidant for preserving food products wherein the antioxidant is extracted from animal tissues.
There is the need in the art is a biological alternative preservative antioxidant that can be used as a feed preservative in a cost-effective manner and that can be easily and efficiently obtained and can meet the regulatory and customer need and customer demand for natural antioxidant that can be used in various types of animal feeds.
A first aspect of the invention is directed to a method of preserving animal feed or an animal feed additive comprising a microbial probiotic comprising applying to said feed or feed additive a preservative, wherein said preservative comprises a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, or a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin.
A further aspect of the invention is directed to a method of preserving a probiotic in an animal feed or animal feed additive comprising the use of a preservative wherein said preservative comprises a polypeptide selected from the group consisting of a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, and a combination of a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin.
An interesting aspect of the invention is directed to a method of promoting the growth or establishment of a probiotic in an animal's intestinal microbiome comprising administering to said animal a composition comprising a polypeptide selected from the group consisting of a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, and a combination of a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin.
The invention is furthermore directed to an animal feed additive or animal feed composition comprising a microbial probiotic and a polypeptide selected from the group consisting of a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, or a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin.
The invention also is directed to a preserved animal feed composition comprising a feed grain stored under aerobic conditions said composition comprising a microbial probiotic, and a preservative, said preservative comprising a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, or a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin.
A further aspect of the invention is directed to use of a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, or a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin for preserving a microbial probiotic in animal feed or an animal feed additive comprising applying to said feed or feed additive a preservative.
The invention is further directed to an animal feed additive or animal feed composition comprising a microbial probiotic and a polypeptide selected from the group consisting of a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, or a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin.
SEQ ID NO 1 is the amino acid sequence of a mature polypeptide having catalase activity available from Thermoascus aurantiacus.
SEQ ID NO 2 is the amino acid sequence of a mature polypeptide having catalase activity available from Thermoascus aurantiacus.
SEQ ID NO 3 is the amino acid sequence of a mature polypeptide having catalase activity available from Thermoascus aurantiacus.
SEQ ID NO 4 is the amino acid sequence of a mature polypeptide having catalase activity available from Thermoascus aurantiacus.
SEQ ID NO 5 is the amino acid sequence of a mature polypeptide having catalase activity available from Thermoascus aurantiacus.
SEQ ID NO 6 is the amino acid sequence of a mature polypeptide having catalase activity available from Thermoascus aurantiacus.
SEQ ID NO 7 is the amino acid sequence of a mature polypeptide having catalase activity from Aspergillus niger comprising 714 amino acid residues.
SEQ ID NO 8 is the amino acid sequence of a mature polypeptide having catalase activity from Aspergillus niger comprising 730 amino acid residues. SEQ ID NO 7 is sold under the tradename Catazyme™.
SEQ ID NO 9 is the amino acid sequence of a mature polypeptide having catalase activity available from Aspergillus lentulus.
SEQ ID NO 10 is the amino acid sequence of a mature polypeptide having catalase activity available from Talaromyces stipitatus.
SEQ ID NO 11 is the amino acid sequence of a mature polypeptide having catalase activity available from Malbranchea cinnamomea.
SEQ ID NO 12 is the amino acid sequence of a mature polypeptide having catalase activity available from Crassicarpon thermophilum.
SEQ ID NO 13 is the amino acid sequence of a mature polypeptide having catalase activity available from Penicillium emersonii.
SEQ ID NO 14 is the amino acid sequence of a mature polypeptide having catalase activity available from Aspergillus versicolor.
SEQ ID NO 15 is the amino acid sequence of a mature polypeptide having catalase activity available from Thermomucor indicae-seudaticae.
SEQ ID NO 16 is the amino acid sequence of a mature polypeptide having activity available from Aspergillus fumigatus.
SEQ ID NO 17 is the amino acid sequence of a mature polypeptide having catalase activity available from Thermothelomyces thermophilus.
SEQ ID NO 18 is the amino acid sequence of a mature polypeptide having catalase activity available from Curvularia verruculosa.
SEQ ID NO 19 is the amino acid sequence of a mature polypeptide having catalase activity available from Mycothermus thermophilus
SEQ ID NO 20 is the amino acid sequence of a mature polypeptide having catalase activity available from Mycothermus thermophilus.
SEQ ID NO 21 is the amino acid sequence of a mature polypeptide having catalase activity available from Penicillium oxalicum.
SEQ ID NO 22 is the amino acid sequence of a mature polypeptide having catalase activity available from Humicola hyalothermophila.
SEQ ID NO 23 is the amino acid sequence of a mature polypeptide having catalase activity available from Thermoascus crustaceus.
SEQ ID NO 24 is the amino acid sequence of a mature polypeptide having catalase activity available from Thielavia australiensis.
SEQ ID NO 25 is the amino acid sequence of a mature polypeptide having catalase activity available from Thielavia hyrcaniae.
SEQ ID NO 26 is the amino acid sequence of a mature polypeptide having catalase activity available from Neurospora crassa.
SEQ ID NO 27 is the amino acid sequence of a mature polypeptide having catalase activity available from Neurospora crassa.
SEQ ID NO 28 is the amino acid sequence of a mature polypeptide having superoxide dismutase activity available from Armillaria ostoyae.
SEQ ID NO 29 is the amino acid sequence of a mature polypeptide having superoxide dismutase activity available from Trichoderma reesei.
SEQ ID NO 30 is the amino acid sequence of a mature polypeptide having superoxide dismutase activity available from Aspergillus templicola.
SEQ ID NO 31 is the amino acid sequence of a mature polypeptide having superoxide dismutase activity available from Aspergillus japonicus.
The invention is directed to an alternative biological solution to chemicals, including vitamins, to preserve animal feed components. The enzyme biological solutions of the invention can be used independent of or in combination with the chemical solutions presently on the market.
Animal: The term “animal” refers to any animal except humans. Examples of animals are monogastric animals, including but not limited to pigs or swine (including, but not limited to, piglets, growing pigs, and sows); poultry such as turkeys, ducks, quail, guinea fowl, geese, pigeons (including squabs) and chicken (including but not limited to broiler chickens (referred to herein as broiles), chicks, layer hens (referred to herein as layers)); pets such as cats and dogs; horses (including but not limited to hotbloods, coldbloods and warm bloods) crustaceans (including but not limited to shrimps and prawns) and fish (including but not limited to amberjack, arapaima, barb, bass, bluefish, bocachico, bream, bullhead, cachama, carp, catfish, catla, chanos, char, cichlid, cobia, cod, crappie, dorada, drum, eel, goby, goldfish, gourami, grouper, guapote, halibut, java, labeo, lai, loach, mackerel, milkfish, mojarra, mudfish, mullet, paco, pearlspot, pejerrey, perch, pike, pompano, roach, salmon, sampa, sauger, sea bass, seabream, shiner, sleeper, snakehead, snapper, snook, sole, spinefoot, sturgeon, sunfish, sweetfish, tench, terror, tilapia, trout, tuna, turbot, vendace, walleye and whitefish).
Animal feed: The term “animal feed” refers to any compound, preparation, or mixture suitable for, or intended for intake by an animal. Animal feed for a monogastric animal typically comprises concentrates as well as vitamins, minerals, enzymes, direct fed microbial, amino acids and/or other feed ingredients (such as in a premix) whereas animal feed for ruminants generally comprises forage (including roughage and silage) and may further comprise concentrates as well as vitamins, minerals, enzymes direct fed microbial, amino acid and/or other feed ingredients (such as in a premix).
Concentrates: The term “concentrates” means feed with high protein and energy concentrations, such as fish meal, molasses, oligosaccharides, sorghum, seeds and grains (either whole or prepared by crushing, milling, etc. from e.g. corn, oats, rye, barley, wheat), oilseed press cake (e.g. from cottonseed, safflower, sunflower, soybean (such as soybean meal), rapeseed/canola, peanut or groundnut), palm kernel cake, yeast derived material and distillers grains (such as wet distillers grains (WDS) and dried distillers grains with solubles (DDGS)).
Feed Premix: The incorporation of the composition of feed additives as exemplified herein above to animal feeds, for example poultry feeds, is in practice carried out using a concentrate or a premix. A premix designates a preferably uniform mixture of one or more microingredients with diluent and/or carrier. Premixes are used to facilitate uniform dispersion of micro-ingredients in a larger mix. A premix according to the invention can be added to feed ingredients or to the drinking water as solids (for example as water soluble powder) or liquids.
Forage: The term “forage” as defined herein also includes roughage. Forage is fresh plant material such as hay and silage from forage plants, grass and other forage plants, seaweed, sprouted grains and legumes, or any combination thereof. Examples of forage plants are Alfalfa (lucerne), birdsfoot trefoil, brassica (e.g. kale, rapeseed (canola), rutabaga (swede), turnip), clover (e.g. alsike clover, red clover, subterranean clover, white clover), grass (e.g. Bermuda grass, brome, false oat grass, fescue, heath grass, meadow grasses, orchard grass, ryegrass, Timothy-grass), corn (maize), millet, barley, oats, rye, sorghum, soybeans and wheat and vegetables such as beets. Forage further includes crop residues from grain production (such as corn stover; straw from wheat, barley, oat, rye and other grains); residues from vegetables like beet tops; residues from oilseed production like stems and leaves form soy beans, rapeseed and other legumes; and fractions from the refining of grains for animal or human consumption or from fuel production or other industries.
Fragment: The term “fragment” means a polypeptide or a catalytic domain having one or more (e.g., several) amino acids absent from the amino and/or carboxyl terminus of a mature polypeptide or domain; wherein the fragment has SOD activity. several) amino acids absent from the amino and/or carboxyl terminus of a mature polypeptide or domain; wherein the fragment has SOD activity.
Fungal origin: The term “fungal origin is intended to mean, in reference to a superoxide dismutase, that the source of the enzyme in a fungus. A fungus is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, fungi. Currently, seven phyla are proposed: Microsporidia, Chytridiomycota, Blastocladiomycota, Neocallimastigomycota, Glomeromycota, Ascomycota, and Basidiomycota. Suitable examples include, without limitation, Trichoderma reesei, Aspergillus versicolor, Aspergillus deflectus, Aspergillus egyptiacus, Westerdykella sp. AS85-2, Aspergillus sp. XZ2669, Preussia terricola, Kionochaeta sp., Metapochonia bulbillosa, Xylomelasma sp. XZ0718, Preussia flanaganii, Cladobotryum sp., Westerdykella sp-46156, Trichoderma hamatum, Mycothermus thermophilus, Cephalotrichiella penicillate, Chaetomium megalocarpum, Chaetomium thermophilum var. thermophilum, Humicola hyalothermophila, Subramaniula anamorphosa, Sphingobacterium sp. T2, Trichoderma rossicum, Trichoderma lixii, Trichoderma sp-54723, Aspergillus niveus, Aspergillus templicola, Pochonia chlamydosporia var. spinulospora, Trichoderma sp-44174, Trichoderma rossicum, Trichoderma sp-54723, Trichoderma sp-44174, Metapochonia suchlasporia, Metarhizium marquandii, Diaporthe nobilis, Tolypocladium sp. XZ2627, Aspergillus japonicus, Metarhizium sp. XZ2431, Armillaria ostoyae, Trichoderma spirale, Aspergillus elegans, Trichoderma sinuosum, Trichoderma virens, Trichoderma harzianum, Fusicolla acetilerea, Plectosphaerella sp. 1-29, Mariannaea punicea, Penicillium oxalicum, Colletotrichum sp-71086, Aspergillus sp. nov. XZ3202, Trichoderma parapiluliferum, Aspergillus sp. nov. XZ3202, Mucor sp. XZ2651, Rhizomucor miehei, Mucor sp. XZ2651, Amphisphaeriaceae-sp 43674, Humicola fuscoatra and Valsaria rubricosa.
Isolated: The term “isolated” means a substance in a form or environment that does not occur in nature. Non-limiting examples of isolated substances include (1) any non-naturally occurring substance, (2) any substance including, but not limited to, any enzyme, variant, nucleic acid, protein, peptide or cofactor, that is at least partially removed from one or more or all of the naturally occurring constituents with which it is associated in nature; (3) any substance modified by the hand of man relative to that substance found in nature; or (4) any substance modified by increasing the amount of the substance relative to other components with which it is naturally associated (e.g., multiple copies of a gene encoding the substance; use of a stronger promoter than the promoter naturally associated with the gene encoding the substance). An isolated substance may be present in a fermentation broth sample.
Mature polypeptide: The term “mature polypeptide” means a polypeptide in its final form following translation and any post-translational modifications, such as N-terminal processing, C-terminal truncation, glycosylation, phosphorylation, etc.
Physical determination of the mature N terminus of SODs was done with Mass Spectrometry. Samples were diluted to 0.1 mg/ml in water. If they were to be deglycosylated before analysis, the samples were suspended in 50 mM Ammonium acetate buffer pH 5.5. The samples are then placed in an Ultimate 3000 UHPLC system (Thermo Scientific) at 8 degrees C. and run over an Advance Bio-RP desalting column (Agilent) The solvents used were A: LC/MS grade water with 0.1% formic acid, solvent: B 95% acetonitrile with 0.1% formic acid. The gradient was 5-80% B over 5 minutes. Post column the protein eluent was analyzed in a Bruker Maxis II mass spectrometer (Bremen Germany) and the resulting trace was analyzed by the supplied Bruker data analysis software. The deconvoluted spectrum was then compared to the calculated molecular weight with the expected N and C terminals using GPMAW (General Protein/Mass Analysis for Windows) software version 12.20. If the values match within 1 Dalton, a match was concluded.
Microbial Probiotic refers to microorganisms that may have a beneficial effect on an animal health.
Obtained or obtainable from: The term “obtained or obtainable from” means that the polypeptide may be found in an organism from a specific taxonomic rank. In one embodiment, the polypeptide is obtained or obtainable from the kingdom Fungi, wherein the term kingdom is the taxonomic rank. In a preferred embodiment, the polypeptide is obtained or obtainable from the phylum Ascomycota, wherein the term phylum is the taxonomic rank. In another preferred embodiment, the polypeptide is obtained or obtainable from the subphylum Pezizomycotina, wherein the term subphylum is the taxonomic rank. In another preferred embodiment, the polypeptide is obtained or obtainable from the class Eurotiomycetes, wherein the term class is the taxonomic rank.
If the taxonomic rank of a polypeptide is not known, it can easily be determined by a person skilled in the art by performing a BLASTP search of the polypeptide (using e.g. the National Center for Biotechnology Information (NCIB) website http://www.ncbi.nlm.nih.gov/) and comparing it to the closest homologues. The skilled person can also compare the sequence to those of the application as filed. An unknown polypeptide which is a fragment of a known polypeptide is considered to be of the same taxonomic species. An unknown natural polypeptide or artificial variant which comprises a substitution, deletion and/or insertion in up to 10 positions is considered to be from the same taxonomic species as the known polypeptide.
Roughage: The term “roughage” means dry plant material with high levels of fiber, such as fiber, bran, husks from seeds and grains and crop residues (such as stover, copra, straw, chaff, sugar beet waste).
Sequence identity: The relatedness between two amino acid sequences or between two nucleotide sequences is described by the parameter “sequence identity”.
For purposes of the present invention, the sequence identity between two amino acid sequences is determined using the Needleman-Wunsch algorithm (Needleman and Wunsch, 1970, J. Mol. Biol. 48: 443-453) as implemented in the Needle program of the EMBOSS package (EMBOSS: The European Molecular Biology Open Software Suite, Rice et al., 2000, Trends Genet. 16: 276-277), preferably version 5.0.0 or later. The parameters used are gap open penalty of 10, gap extension penalty of 0.5, and the EBLOSUM62 (EMBOSS version of BLOSUM62) substitution matrix. The output of Needle labeled “longest identity” (obtained using the —nobrief option) is used as the percent identity and is calculated as follows:
(Identical Residues×100)/(Length of Alignment−Total Number of Gaps in Alignment)
Substantially pure polypeptide: The term “substantially pure polypeptide” means a preparation that contains at most 10%, at most 8%, at most 6%, at most 5%, at most 4%, at most 3%, at most 2%, at most 1%, and at most 0.5% by weight of other polypeptide material with which it is natively or recombinantly associated. Preferably, the polypeptide is at least 92% pure, e.g., at least 94% pure, at least 95% pure, at least 96% pure, at least 97% pure, at least 98% pure, at least 99%, at least 99.5% pure, and 100% pure by weight of the total polypeptide material present in the preparation. The polypeptides of the present invention are preferably in a substantially pure form. This can be accomplished, for example, by preparing the polypeptide by well known recombinant methods or by classical purification methods.
Tm: The term Tm, as used in the Examples refers to the temperature at which 50% of the protein molecules are unfolded and 50% of the protein molecules are folded.
Variant: The term “variant” means a polypeptide having SOD activity comprising an alteration, i.e., a substitution, insertion, and/or deletion, of one or more (several) amino acid residues at one or more (e.g., several) positions. A substitution means replacement of the amino acid occupying a position with a different amino acid; a deletion means removal of the amino acid occupying a position; and an insertion means adding 1, 2, or 3 amino acids adjacent to and immediately following the amino acid occupying the position.
Nutrient: The term “nutrient” in the present invention means components or elements contained in dietary feed for an animal, including water-soluble ingredients, fat-soluble ingredients and others. The example of water-soluble ingredients includes but is not limited to carbohydrates such as saccharides including glucose, fructose, galactose and starch; minerals such as calcium, magnesium, zinc, phosphorus, potassium, sodium and sulfur; nitrogen source such as amino acids and proteins, vitamins such as vitamin B1, vitamin B2, vitamin B3, vitamin B6, folic acid, vitamin B12, biotin and phatothenic acid. The example of the fat-soluble ingredients includes but is not limited to fats such as fat acids including saturated fatty acids (SFA); mono-unsaturated fatty acids (MUFA) and poly-unsaturated fatty acids (PUFA), fibre, vitamins such as vitamin A, vitamin E and vitamin K.
Superoxide: Superoxide is the name of the short-lived, membrane impermeable superoxide radical anion, which is created when molecular oxygen captures a single electron.
The superoxide radical ion can acts as a one-electron reducing agent, if it donates electrons to a molecule (=acceptor) other than itself. In this process, the superoxide radical is oxidised (=looses the electron) and the acceptor “accepts” the electron and thereby gets reduced.
O2·−+acceptor→O2+acceptor·−
The reduced acceptor could get even further reduced by accepting another electron from a second superoxide radical molecule.
O2·−+acceptor·−→O2+acceptor2−
If no acceptor accepts the electron from superoxide, two superoxide molecules will react with each other, forming hydrogen peroxide.
O2·−+O2·−+2H+→O2+H2O2
However this second reduction of superoxide requires the compression of two full negative charges on the diatomic oxygen molecule, which is an energetically disfavourable process. As a result, superoxide is generally a better reducing agent than oxidizing agent.
This can also be seen from the superoxide radical anion's negative redox potential. A negative redox potential means, that the superoxide radical anion wants to get rid of the electron, rather than oxygen wants to accept an electron. (Hydrogen peroxide in contrast has a positive redox potential, it wants to accept electrons, thereby oxidising the molecule it accepts the electrons from.)
Superoxide dismutase: Superoxide dismutases (SOD) catalize this energetically unfavourable reaction of two superoxide molecules (=dismutation of superoxide) into hydrogen peroxide and water.
SOD's thus remove a reducing agent. In other words, SODs are pro-oxidants, not antioxidants. The beneficial effect of SODs arises from their capability to remove the reactive and damaging superoxide radical ion rather than being an antioxidant.
Reactive oxygen species: Both hydrogen peroxide and superoxide are reactive oxygen species. Due to their reactive nature they react with biomolecules and damage/deactivate those. CAT and SOD “disarm” these reactive oxygen species so they cannot damage/deactivate biomolecules. ROS include
Table of reactive oxygen species and enzymes acting on the various ROS types:
1O2
A first aspect of the invention is directed to a method of preserving animal feed or an animal feed additive comprising a microbial probiotic comprising applying to said feed or feed additive a preservative, wherein said preservative comprises a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, or a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin.
A further aspect of the invention is directed to a method of preserving a probiotic in an animal feed or animal feed additive comprising the use of a preservative wherein said preservative comprises a polypeptide selected from the group consisting of a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, and a combination of a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin.
A further aspect of the invention is directed to a method of promoting the growth or establishment of a probiotic in an animal's intestinal microbiome comprising administering to said animal a composition comprising a polypeptide selected from the group consisting of a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, and a combination of a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin.
In the methods of the invention, the level of chemical preservative applied to said animal feed or an animal feed additive is typically reduced compared to an animal feed or an animal feed additive absent of a polypeptide having catalase activity or absent of a polypeptide having superoxide dismutase activity.
The polypeptide having catalase activity is preferably dosed at a level of 50 to 1000 U enzyme protein per kg animal feed, such as 100 to 1000 U enzyme protein per kg animal feed, such as 200 to 900 U, 300 to 800, 400 to 700, 500 to 600 enzyme protein per kg animal feed, or any combination of these intervals.
In the methods of the invention, wherein the level of chemical preservative applied to said animal feed or an animal feed additive is typically reduced compared to an animal feed or an animal feed additive absent of a polypeptide having catalase activity or absent of a polypeptide having superoxide dismutase activity, the reduced chemical preservative is suitably selected from Butylated hydroxytoluene (BHT), Butylated hydroxyanisole (BHA) and Ethoxyquin.
The method may comprise adding one or more antioxidants selected from the group consisting of Vitamin A, Vitamin B6, Vitamin B12, Vitamin C, Vitamin D, Vitamin E, Vitamin K, Carotenoids (e.g. astaxanthin, canthaxanthin, . . . ), Thiamin, Riboflavin, Niacin, Pyridoxine, Biotin, essential fatty acids, Essential oils, Methionine, Iron, Zinc, Manganese, Copper, Selenium, and Iodine, preferably selected from the group consisting of Vitamin C, Vitamin E, Vitamin K and selenium.
A further aspect is directed to a method of preventing the oxidative degradation of a microbial probiotic comprising the use of preservative; wherein said preservative comprises a polypeptide selected from the group consisting of a polypeptide having catalase activity; a polypeptide having superoxide dismutase activity; and a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin.
The methods of invention relate to the administration of animal feed to an animal. The animal is typically a mono-gastric animal, e.g. pigs or swine (including, but not limited to, piglets, growing pigs, and sows); poultry (including but not limited to poultry, turkey, duck, quail, guinea fowl, goose, pigeon, squab, chicken, broiler, layer, pullet and chick); pets (including but not limited to cats and dogs); fish (including but not limited to amberjack, arapaima, barb, bass, bluefish, bocachico, bream, bullhead, cachama, carp, catfish, catla, chanos, char, cichlid, cobia, cod, crappie, dorada, drum, eel, goby, goldfish, gourami, grouper, guapote, halibut, java, labeo, lai, loach, mackerel, milkfish, mojarra, mudfish, mullet, paco, pearlspot, pejerrey, perch, pike, pompano, roach, salmon, sampa, sauger, sea bass, seabream, shiner, sleeper, snakehead, snapper, snook, sole, spinefoot, sturgeon, sunfish, sweetfish, tench, terror, tilapia, trout, tuna, turbot, vendace, walleye and whitefish); and crustaceans (including but not limited to shrimps and prawns). In a more preferred embodiment, the animal is selected from the group consisting of swine, poultry, crustaceans and fish. In an even more preferred embodiment, the animal is selected from the group consisting of swine, piglet, growing pig, sow, chicken, broiler, layer, pullet and chick. In a further preferred embodiment, the animal is selected from the group consisting of swine, piglet, growing pig and sow.
A further aspect of the invention is directed to a method of feeding a microbial probiotic to an animal, such as poultry or pigs, comprising adding a preservative to a raw feed material, wherein said preservative comprises a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, or a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin.
A further aspect of the invention is directed to a method of feeding an animal, wherein the animal feed or animal feed additive comprises a microbial probiotic and a preservative, wherein said preservative comprises a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, or a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin and further comprises one or more components selected from the list consisting of:
One may furthermore administer additional enzymes but enzymes other than a catalase and a superoxide dismutase are not essential for the beneficial effects of the invention. The polypeptide having superoxide dismutase activity is suitably obtained, obtainable from or originating from Armillaria ostoyae, Aspergillus japonicus, Trichoderma reesei, and Aspergillus templicola. The polypeptide having superoxide dismutase activity is suitably selected from the group consisting of a polypeptide having:
A further aspect of the invention is directed to a use of an enzyme selected from polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, or a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin for preserving animal feed or an animal feed additive comprising applying to said feed or feed additive a preservative.
An alternative definition of the invention is related to a use of an enzyme selected from polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, or a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin for preventing the degradation of the vitamins, proteins, fats and lipids contained in animal feed components comprising applying said enzyme to an animal feed or to an animal feed additive or feed ingredient in said animal feed.
A biological solution which is superior to chemical solutions has been found. It has been found that either or both of catalases of the invention and superoxide dismutases of the invention are superior in their anti-oxidant effect in feed compared to vitamin E for preserving the activity of microbial probiotics. A calculation using SEQ ID NO 31, based on validated data, finds the latter to have a 2700-fold higher antioxidant effect compared to vitamin E.
An aspect of the invention is directed to a preserved animal feed composition comprising a microbial probiotic and a feed grain stored under aerobic conditions said composition further comprising a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, or a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin. Typically, the preserved animal feed composition comprises a reduced level of chemical preservative compared to an animal feed or an animal feed additive absent of a polypeptide having catalase activity. The animal feed composition may comprise one or more antioxidants selected from the group consisting of Vitamin A, Vitamin B6, Vitamin B12, Vitamin C, Vitamin D, Vitamin E, Vitamin K, Carotenoids (e.g. astaxanthin, canthaxanthin, . . . ), Thiamin, Riboflavin, Niacin, Pyridoxine, Biotin, essential fatty acids, Essential oils, Methionine, Iron, Zinc, Manganese, Copper, Selenium and Iodine. The preserved animal feed composition typically comprises a reduced level of chemical preservative selected from Butylated hydroxytoluene (BHT), Butylated hydroxyanisole (BHA) and Ethoxyquin. The preserved animal feed composition may be substantially absent or absent a content of Butylated hydroxytoluene (BHT), Butylated hydroxyanisole (BHA) and Ethoxyquin.
In a typical embodiment, the animal feed composition comprises a microbial probiotic and further comprises a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, or a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin and further comprises a vitamin selected from the group consisting of Vitamin E or a derivative thereof and Vitamin C or a derivative thereof.
In a typical embodiment, the animal feed composition comprises a microbial probiotic and further comprises a polypeptide having catalase activity, a polypeptide having superoxide dismutase activity, or a combination of a polypeptide having catalase activity and a polypeptide having superoxide dismutase activity, wherein the polypeptide having superoxide dismutase activity is of fungal origin and further comprises selenium.
The preserved animal feed composition may comprise one or more components selected from the list consisting of:
The preserved animal feed composition may comprise the polypeptide having catalase activity at a dose of 50 to 1000 U enzyme protein per kg animal feed, such as 100 to 1000 U enzyme protein per kg animal feed, such as 200 to 900 U, 300 to 800, 400 to 700, 500 to 600 enzyme protein per kg animal feed, or any combination of these intervals.
The protein source of preserved animal feed composition may be selected from the group consisting of soybean, wild soybean, beans, lupin, tepary bean, scarlet runner bean, slimjim bean, lima bean, French bean, Broad bean (fava bean), chickpea, lentil, peanut, Spanish peanut, canola, sunflower seed, cotton seed, rapeseed (oilseed rape) or pea or in a processed form such as soybean meal, full fat soy bean meal, soy protein concentrate (SPC), fermented soybean meal (FSBM), sunflower meal, cotton seed meal, rapeseed meal, fish meal, bone meal, feather meal, whey or any combination thereof.
The energy source of preserved animal feed composition may be selected from the group consisting of maize, corn, sorghum, barley, wheat, oats, rice, triticale, rye, beet, sugar beet, spinach, potato, cassava, quinoa, cabbage, switchgrass, millet, pearl millet, foxtail millet or in a processed form such as milled corn, milled maize, potato starch, cassava starch, milled sorghum, milled switchgrass, milled millet, milled foxtail millet, milled pearl millet, or any combination thereof.
The preserved animal feed composition is typically such that the polypeptide having catalase activity is obtained or obtainable from or originating from a fungus selected from the group consisting of Thermoascus aurantiacus and Aspergillus niger, preferably Thermoascus aurantiacus. The polypeptide having catalase activity may be selected from the group consisting of
The polypeptide having catalase activity is more typically selected from the group consisting of
The polypeptide having superoxide dismutase activity is obtained, obtainable from or originating from Armillaria ostoyae, Aspergillus japonicus, Trichoderma reesei, and Aspergillus templicola.
Typically, the polypeptide having superoxide dismutase activity is selected from the group consisting of a polypeptide having:
In a preferred example, the animal feed may further comprise one or more components selected from the list consisting of one or more additional enzymes; one or more microbes; one or more vitamins; one or more minerals; one or more amino acids; and one or more other feed ingredients, as described herein.
The invention, in a further aspect, is directed to an animal feed additive and to an animal feed comprising a microbial probiotic and the feed preservative composition as defined herein.
The feed preservative composition comprises a polypeptide having catalase activity, and further comprising one or more antioxidants selected from the group consisting of Vitamin A, Vitamin B6, Vitamin B12, Vitamin C, Vitamin D, Vitamin E, Vitamin K, Carotenoids (e.g. astaxanthin, canthaxanthin, . . . ), Thiamin, Riboflavin, Niacin, Pyridoxine, Biotin, essential fatty acids, Essential oils, Methionine, Iron, Zinc, Manganese, Copper, Selenium and Iodine, wherein said feed preservative composition is typically substantially free of Butylated hydroxytoluene (BHT), Butylated hydroxyanisole (BHA) and Ethoxyquin
The feed preservative composition may comprise
In a further embodiment, the feed preservative composition may further comprise one or more components selected from the list consisting of:
The polypeptide having catalase activity is preferably dosed at a level of 50 to 1000 U enzyme protein per kg animal feed, such as 100 to 1000 U enzyme protein per kg animal feed, such as 200 to 900 U, 300 to 800, 400 to 700, 500 to 600 enzyme protein per kg animal feed, or any combination of these intervals.
The animal is typically a mono-gastric animal, e.g. pigs or swine (including, but not limited to, piglets, growing pigs, and sows); poultry (including but not limited to poultry, turkey, duck, quail, guinea fowl, goose, pigeon, squab, chicken, broiler, layer, pullet and chick); pets (including but not limited to cats and dogs); fish (including but not limited to amberjack, arapaima, barb, bass, bluefish, bocachico, bream, bullhead, cachama, carp, catfish, catla, chanos, char, cichlid, cobia, cod, crappie, dorada, drum, eel, goby, goldfish, gourami, grouper, guapote, halibut, java, labeo, lai, loach, mackerel, milkfish, mojarra, mudfish, mullet, paco, pearlspot, pejerrey, perch, pike, pompano, roach, salmon, sampa, sauger, sea bass, seabream, shiner, sleeper, snakehead, snapper, snook, sole, spinefoot, sturgeon, sunfish, sweetfish, tench, terror, tilapia, trout, tuna, turbot, vendace, walleye and whitefish); and crustaceans (including but not limited to shrimps and prawns). In a more preferred embodiment, the animal is selected from the group consisting of swine, poultry, crustaceans and fish. In an even more preferred embodiment, the animal is selected from the group consisting of swine, piglet, growing pig, sow, chicken, broiler, layer, pullet and chick. In a further preferred embodiment, the animal is selected from the group consisting of swine, piglet, growing pig and sow. The mammal is typically selected from the group consisting of swine, piglet, growing pig and sow.
The present invention is directed to a method for preparing an animal feed product comprising: Combining a probiotic strain and an enzyme selected from the group consisting of a catalase and a superoxide dismutase. This combining enhances the survival rate of the probiotic strain.
In the present invention, the term microbial probiotic refers to microorganisms that may have a beneficial effect on an animal health.
The microbial probiotic may be selected from the group consisting of the genera Lactococcus (such as Lactococcus cremoris and Lactococcus lactis), Lactobacillus (such as Lactobacillus acidophilus, Lactobacillus rhamnosus, Lactobacillus casei, Lactobacillus kefiri, Lactobacillus bifidus, Lactobacillus brevis, Lactobacillus helveticus, Lactobacillus paracasei, Lactobacillus rhamnosus, Lactobacillus salivarius, Lactobacillus curvatus, Lactobacillus bulgaricus, Lactobacillus sakei, Lactobacillus reuteri, Lactobacillus fermentum, Lactobacillus farciminis, Lactobacillus lactis, Lactobacillus delbrueckii, Lactobacillus plantarum, Lactobacillus paraplantarum, Lactobacillus crispatus, Lactobacillus gasseri, Lactobacillus johnsonii and Lactobacillus jensenii), Leuconostoc, Carnobacterium, Enterococcus, Propionibacteium, Pediococcus, Streptococcus, Bifidobacterium (such as Bifidobacterium lactis, Bifidobacterium bifidium, Bifidobacterium longum, Bifidobacterium animalis, Bifidobacterium breve, Bifidobacterium infantis, Bifidobacterium catenulatum, Bifidobacterium pseudocatenulatum, Bifidobacterium adolescentis, and Bifidobacterium angulatum), Weissella (such as Weissella confusa), Bacillus (such as Bacillus pumilus), and Pediococcus (such as Pediococcus acidilactici).
Suitably the microbial probiotic may comprise a bacterium from one or more of the following genera: Lactobacillus, Lactococcus, Streptococcus, Bacillus, Pediococcus, Enterococcus, Leuconostoc, Carnobacterium, Propionibacterium, Bifidobacterium, Clostridium and Megasphaera and combinations thereof. Suitably the microbial probiotic may comprise a bacterium from one or more of the following genera Lactobacillus, Lactococcus, Streptococcus, Bacillus, Pediococcus, and Weissella. Suitably, the microbial probiotic is selected from the group consisting of Lactobacillus rhamnosus, Weissella confusa, Bacillus pumilus, and Pediococcus acidilactici).
In a preferred embodiment, the microbial probiotic is selected from a facultative anaerobe and an aerobe bacterium.
In one embodiment the microbial probiotic may be selected from the following Bacillus spp: Bacillus subtilis, Bacillus cereus, Bacillus licheniformis and Bacillus amyloliquefaciens. In one embodiment the microbial probiotic may be a combination comprising two or more Bacillus strains. In one embodiment the microbial probiotic may be a combination comprising two or more Bacillus strains. In one embodiment the microbial probiotic may be a combination of two or more the Bacillus subtilis strains 3A-P4 (PTA-6506); 15A-P4 (PTA-6507); 22C-P1 (PTA-6508); 2084 (NRRL B-500130): LSSAO1 (NRRL-B-50104); BS27 (NRRL B-50105); BS 18 (NRRL B-50633); and BS 278 (NRRL B-50634). Strains 3A-P4 (PTA-6506), 15A-P4 (PTA-6507) and 22C-P1 (PTA-6508) are publically available from American Type Culture Collection (ATCC).
Strains 2084 (NRRL B-500130); LSSAO1 (NRRL-B-50104); BS27 (NRRL B-50105) are publically available from the Agricultural Research Service Culture Collection (NRRL). Strain Bacillus subtilis LSSAO1 is sometimes referred to as B. subtilis 8. These strains are taught in U.S. Pat. No. 7,754,469 B2. Bacillus subtilis BS 18 and Bacillus subtilis BS 278 were deposited by Andy Madisen of W227 N752 Westmound Dr. Waukesha, WI 53186, USA or Danisco USA Inc. of W227 N752 Westmound Dr. Waukesha, WI 53186, USA under the Budapest Treaty at the Agricultural Research Service Culture Collection (NRRL) at 1815 North University Street, Peoria, Illinois 61604, United States of America, under deposit numbers NRRL B-50633 and NRRL B-50634, respectively on 9 Jan. 2012. Andy Madisen of W227 N752 Westmound Dr. Waukesha, WI 53186, USA and Danisco USA Inc. of W227 N752 Westmound Dr. Waukesha, WI 53186, USA authorise Danisco A/S of Langebrogade 1, PO Box 17, DK-1001, Copenhagen K, Denmark to refer to these deposited biological materials in this patent application and have given unreserved and irrevocable consent to the deposited material being made available to the public.
In one embodiment the microbial probiotic may be selected from the following Lactococcus spp: Lactococcus cremoris and Lactococcus lactis and combinations thereof. In one embodiment the microbial probiotic may be selected from the following Lactobacillus spp: Lactobacillus buchneri, Lactobacillus acidophilus, Lactobacillus casei, Lactobacillus kefiri, Lactobacillus bifidus, Lactobacillus brevis, Lactobacillus helveticus, Lactobacillus paracasei, Lactobacillus rhamnosus, Lactobacillus salivarius, Lactobacillus curvatus, Lactobacillus bulgaricus, Lactobacillus sakei, Lactobacillus reuteri, Lactobacillus fermentum, Lactobacillus farciminis, Lactobacillus lactis, Lactobacillus delbreuckii, Lactobacillus plantarum, Lactobacillus paraplantarum, Lactobacillus farciminis, Lactobacillus rhamnosus, Lactobacillus crispatus, Lactobacillus gasseri, Lactobacillus johnsonii and Lactobacillus jensenii, and combinations of any thereof. In one embodiment the MICROBIAL PROBIOTIC may be selected from the following Bifidobacteria spp: Bifidobacterium lactis, Bifidobacterium bifidium, Bifidobacterium longum, Bifidobacterium animalis, Bifidobacterium breve, Bifidobacterium infantis, Bifidobacterium catenulatum, Bifidobacterium pseudocatenulatum, Bifidobacterium adolescentis, and Bifidobacterium angulatum, and combinations of any thereof.
Suitably the microbial probiotic may comprise a bacterium from one or more of the following species: Bacillus subtilis, Bacillus licheniformis, Bacillus amyloliquefaciens, Enterococcus faecium, Enterococcus spp, and Pediococcus spp, Lactobacillus spp, Bifidobacterium spp, Lactobacillus acidophilus, Pediococsus acidilactici, Lactococcus lactis, Bifidobacterium bifidum, Bacillus subtilis, Propionibacterium thoenii, Lactobacillus farciminis, Lactobacillus rhamnosus, Megasphaera elsdenii, Clostridium butyricum, Bifidobacterium animalis ssp. animalis, Lactobacillus reuteri, Bacillus cereus, Lactobacillus salivarius ssp. Salivarius, Propionibacteria sp and combinations thereof.
The microbial probiotic used in the present invention may be of the same type (genus, species and strain) or may comprise a mixture of genera, species and/or strains.
Suitably the microbial probiotic according to the present invention may be one or more of the products or the microorganisms contained in the following products:
The microbial probiotic may be a commercially available probiotic or direct feed microbial. Preferably the microbial probiotic to be used in accordance with the present invention is a microorganism which is generally recognised as safe and, which is preferably GRAS approved.
In one embodiment suitably the microbial probiotic may be Enviva Pro®. Enviva Pro® is commercially available from Danisco A/S and is a combination of Bacillus strain 2084 Accession No. NRRI B-50013, Bacillus strain LSSAO1 Accession No. NRRL B-50104 and Bacillus strain 15A-P4 ATCC Accession No. PTA-6507 (as taught in U.S. Pat. No. 7,754,469 B).
Suitably, the microbial probiotic may comprise a yeast from the genera: Saccharomyces spp.
In one embodiment the antipathogen microbial probiotic may be one or more of the following bacteria: Bacillus subtilis strain 2084 Accession No. NRRL B-50013, Bacillus subtilis strain LSSAO1 Accession No. NRRL B-50104, Bacillus subtilis strain 15A-P4 ATCC Accession No. PTA-6507, Bacillus subtilis strain 3A-P4 ATCC Accession No. PTA-6506, and Bacillus subtilis strain BS27 ATCC Accession No. NRRL B-50105.
Preferably the microbial probiotic is not an inactivated microorganism.
A skilled person will readily be aware of specific species and or strains of microorganisms from within the genera described herein which are used in the feed industry and which are generally considered suitable for animal consumption. Preferably, the microbial probiotic used in accordance with the present invention is one which is recognized as suitable for animal consumption.
In some embodiments it is important that the microbial probiotic is tolerant to heat, i.e. is thermotolerant. This is particularly the case where the feed is pelleted. Therefore, in one embodiment the microbial probiotic may be a thermotolerant microorganism, such as a thermotolerant bacterium, including for example Bacillus spp.
In some embodiments it may be preferable that the microbial probiotic is a spore producing bacteria, such as Bacilli, e.g. Bacillus spp. Bacilli are able to from stable endospores when conditions for growth are unfavorable and are very resistant to heat, pH, moisture and disinfectants.
In one embodiment suitably the microbial probiotic may decrease or prevent intestinal establishment of pathogenic microorganism (such as Clostridium perfringens and/or E. coli and/or Salmonella spp and/or Campylobacter spp.).
In one embodiment the microbial probiotic according to the present invention may be an inhibitory strain (or an antipathogen strain).
In one embodiment the microbial probiotic of the present invention is preferably an antipathogen. The term “antipathogen” as used herein means that the microbial probiotic counters an effect (e.g. a negative effect) of a pathogen.
The polypeptide having catalase activity is selected from the group comprising a polypeptide classified as an EC 1.11.1.6 catalase and a polypeptide classified as an EP 1.11.1.21 catalase peroxidase.
In a preferred embodiment, the polypeptide having catalase activity is obtained or obtainable from or originating from a fungus. Typically, the polypeptide having catalase activity is obtained or obtainable from or originating from a fungus selected from the group consisting of Thermoascus aurantiacus, Aspergillus niger, Aspergillus lentulus, Aspergillus versicolor, Aspergillus fumigatus, Talaromyces stipitatus, Malbranchea cinnamomea, Crassicarpon thermophilum, Penicillium emersonii, Thermomucor indicae-seudaticae, Thermothelomyces thermophilus, Curvularia verruculosa, Mycothermus thermophilus, Penicillium oxalicum, Humicola hyalothermophila, Thermoascus crustaceus, Thielavia australiensis, Thielavia hyrcaniae and Neurospora crassa. The method according to any of claims 1 to 8, wherein the polypeptide having catalase activity is obtained or obtainable from or originating from a fungus selected from the group consisting of Thermoascus aurantiacus, Aspergillus niger, Aspergillus lentulus, Aspergillus versicolor and Aspergillus fumigatus. Preferably wherein the polypeptide having catalase activity is obtained or obtainable from or originating from a fungus selected from the group consisting of Thermoascus aurantiacus and Aspergillus niger, preferably Thermoascus aurantiacus.
The polypeptide having catalase activity is preferably selected from the group consisting of
The polypeptide having catalase activity is more preferably selected from the group consisting of
In a preferred embodiment, the polypeptide with catalase activity has at least 80%, at least 85%, at least 90%, at least 95%, at least 98%, at least 99%, or 100% sequence identity to any one of SEQ ID NO:1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO:5, and SEQ ID NO:6 and is obtained, obtainable from or originating from Thermoascus aurantiacus.
The catalase is suitably thermal stable such that it retains at least 40% of its activity when measured at 50° C. and pH 7 such as retaining at least 50% activity, such as retaining at least 55% activity, such as retaining at least 60% activity, such as retaining at least 65% activity, such as retaining at least 70% activity, such as retaining at least 75% activity, such as retaining at least 80% activity.
In an embodiment of the invention, the catalase is thermal stable such that it retains at least 50% of its activity when measured at 50° C. and pH 5 such as retaining at least 55% activity, such as retaining at least 60% activity, such as retaining least 65% activity, such as retaining at least 70% activity, such as retaining at least 75% activity, such as retaining at least 80% activity. In an embodiment of the invention, the catalase is thermal stable such that its Tm is at least 50° C. at pH 5.
In an alternative embodiment of the invention, the catalase is thermal stable such that it retains at least 50% of its activity when measured at 50° C. and pH 4 such as retaining at least 55% activity, such as retaining at least 60% activity, such as retaining least 65% activity, such as retaining at least 70% activity, such as retaining at least 75% activity, such as retaining at least 80% activity. An aspect of the invention is directed to an animal feed additive comprising a catalase wherein the catalase is thermal stable such that its Tm is at least 50° C. at pH 4.
In an alternative embodiment of the invention, the catalase is thermal stable such that it retains at least 50% of its activity when measured at 40° C. and pH 3 such as retaining at least 55% activity, such as retaining at least 60% activity, such as retaining least 65% activity, such as retaining at least 70% activity, such as retaining at least 75% activity, such as retaining at least 80% activity. An aspect of the invention is directed to an animal feed additive comprising a catalase wherein the catalase is thermal stable such that its Tm is at least 40° C. at pH 3.
Gastric Stability of catalases
The catalase from Bovine Liver (Enzyme Commission (EC) Number: 1.11.1.6 CAS Number: 9001-05-2, Molecular weight: 250 kDa) has an activity of 3524 U/mg EP and a gastric stability wherein it retains only 40% of its activity under the gastric stability studies of Example 4.
In an alternative embodiment of the invention, the catalase is gastric stable such that it retains at least 40% of its activity when measured according to the test method described in Example 4, such as retaining at least 50% activity, such as retaining at least 55% activity, such as retaining at least 60% activity, such as retaining at least 65% activity, such as retaining at least 70% activity, such as retaining at least 75% activity, such as retaining at least 80% activity. As can be seen from the Table in Example 4, catalases of fungal origin retain at least 50% of their activity at pH 3 and exposure to pepsin.
The preservative further comprises a polypeptide having superoxide dismutase activity of fungal origin. Superoxide dismutase (SOD, EC 1.15.1.1) is an enzyme that alternately catalyzes the dismutation (or partitioning) of the superoxide (O2−) radical into either ordinary molecular oxygen (O2) or hydrogen peroxide (H2O2).
The superoxide dismutase of the invention may be obtainable, may be obtained, may be derived from a superoxide dismutase obtainable from a fungus selected from the group consisting of Trichoderma reesei, Aspergillus versicolor, Aspergillus deflectus, Aspergillus egyptiacus, Westerdykella sp. AS85-2, Aspergillus sp. XZ2669, Preussia terricola, Kionochaeta sp., Metapochonia bulbillosa, Xylomelasma sp. XZ0718, Preussia flanaganii, Cladobotryum sp., Westerdykella sp-46156, Trichoderma hamatum, Mycothermus thermophilus, Cephalotrichiella penicillate, Chaetomium megalocarpum, Chaetomium thermophilum var. thermophilum, Humicola hyalothermophila, Subramaniula anamorphosa, Sphingobacterium sp. T2, Trichoderma rossicum, Trichoderma lixii, Trichoderma sp-54723, Aspergillus niveus, Aspergillus templicola, Pochonia chlamydosporia var. spinulospora, Trichoderma sp-44174, Trichoderma rossicum, Trichoderma sp-54723, Trichoderma sp-44174, Metapochonia suchlasporia, Metarhizium marquandii, Diaporthe nobilis, Tolypocladium sp. XZ2627, Aspergillus japonicus, Metarhizium sp. XZ2431, Armillaria ostoyae, Trichoderma spirale, Aspergillus elegans, Trichoderma sinuosum, Trichoderma reesei, Trichoderma virens, Trichoderma harzianum, Fusicolla acetilerea, Plectosphaerella sp. 1-29, Mariannaea punicea, Penicillium oxalicum, Colletotrichum sp-71086, Aspergillus sp. nov. XZ3202, Trichoderma parapiluliferum, Aspergillus sp. nov. XZ3202, Mucor sp. XZ2651, Rhizomucor miehei, Mucor sp. XZ2651, Amphisphaeriaceae-sp 43674, Humicola fuscoatra and Valsaria rubricosa.
The superoxide dismutase is typically selected from those disclosed in WO 2020/200321. In suitable embodiment, the superoxide dismutase is obtained or obtainable from Armillaria ostoyae, Aspergillus japonicus, Trichoderma reesei, and Aspergillus templicola. In a suitable embodiment, the superoxide dismutase is selected from a polypeptide having:
The feed additive may be formulated as a liquid or a solid. For a liquid formulation, the formulating agent may comprise a polyol (such as e.g. glycerol, ethylene glycol or propylene glycol), a salt (such as e.g. sodium chloride, sodium benzoate, potassium sorbate) or a sugar or sugar derivative (such as e.g. dextrin, glucose, sucrose, and sorbitol). Thus, in one embodiment, the composition is a liquid composition comprising the polypeptide of the invention and one or more formulating agents selected from the list consisting of glycerol, ethylene glycol, 1,2-propylene glycol, 1,3-propylene glycol, sodium chloride, sodium benzoate, potassium sorbate, dextrin, glucose, sucrose, and sorbitol. The liquid formulation may be sprayed onto the feed after it has been pelleted or may be added to drinking water given to the animals.
In one embodiment, the liquid formulation further comprises 20%-80% polyol (i.e. total amount of polyol), preferably 25%-75% polyol, more preferably 30%-70% polyol, more preferably 35%-65% polyol or most preferably 40%-60% polyol. In one embodiment, the liquid formulation comprises 20%-80% polyol, preferably 25%-75% polyol, more preferably 30%-70% polyol, more preferably 35%-65% polyol or most preferably 40%-60% polyol wherein the polyol is selected from the group consisting of glycerol, sorbitol, propylene glycol (MPG), ethylene glycol, diethylene glycol, triethylene glycol, 1, 2-propylene glycol or 1, 3-propylene glycol, dipropylene glycol, polyethylene glycol (PEG) having an average molecular weight below about 600 and polypropylene glycol (PPG) having an average molecular weight below about 600. In one embodiment, the liquid formulation comprises 20%-80% polyol (i.e. total amount of polyol), preferably 25%-75% polyol, more preferably 30%-70% polyol, more preferably 35%-65% polyol or most preferably 40%-60% polyol wherein the polyol is selected from the group consisting of glycerol, sorbitol and propylene glycol (MPG).
In one embodiment, the liquid formulation further comprises preservative, preferably selected from the group consisting of sodium sorbate, potassium sorbate, sodium benzoate and potassion benzoate or any combination thereof. In one embodiment, the liquid formulation comprises 0.02% to 1.5% w/w preservative, more preferably 0.05% to 1.0% w/w preservative or most preferably 0.1% to 0.5% w/w preservative. In one embodiment, the liquid formulation comprises 0.001% to 2.0% w/w preservative (i.e. total amount of preservative), preferably 0.02% to 1.5% w/w preservative, more preferably 0.05% to 1.0% w/w preservative or most preferably 0.1% to 0.5% w/w preservative wherein the preservative is selected from the group consisting of sodium sorbate, potassium sorbate, sodium benzoate and potassium benzoate or any combination thereof.
For a solid formulation, the formulation may be for example as a granule, spray dried powder or agglomerate (e.g. as disclosed in WO2000/70034). The formulating agent may comprise a salt (organic or inorganic zinc, sodium, potassium or calcium salts such as e.g. such as calcium acetate, calcium benzoate, calcium carbonate, calcium chloride, calcium citrate, calcium sorbate, calcium sulfate, potassium acetate, potassium benzoate, potassium carbonate, potassium chloride, potassium citrate, potassium sorbate, potassium sulfate, sodium acetate, sodium benzoate, sodium carbonate, sodium chloride, sodium citrate, sodium sulfate, zinc acetate, zinc benzoate, zinc carbonate, zinc chloride, zinc citrate, zinc sorbate, zinc sulfate), starch or a sugar or sugar derivative (such as e.g. sucrose, dextrin, glucose, lactose, sorbitol).
In one embodiment, the composition is a solid composition, such as a spray dried composition, comprising the polypeptide having SOD activity of the invention and one or more formulating agents selected from the list consisting of sodium chloride, sodium benzoate, potassium sorbate, sodium sulfate, potassium sulfate, magnesium sulfate, sodium thiosulfate, calcium carbonate, sodium citrate, dextrin, glucose, sucrose, sorbitol, lactose, starch and cellulose. In a preferred embodiment, the formulating agent is selected from one or more of the following compounds: sodium sulfate, dextrin, cellulose, sodium thiosulfate, magnesium sulfate and calcium carbonate.
The present invention also relates to enzyme granules/particles comprising the polypeptide having catalase activity of the invention optionally combined with one or more additional enzymes. The granule is composed of a core, and optionally one or more coatings (outer layers) surrounding the core.
Typically, the granule/particle size, measured as equivalent spherical diameter (volume based average particle size), of the granule is 20-2000 μm, particularly 50-1500 μm, 100-1500 μm or 250-1200 μm.
The core can be prepared by granulating a blend of the ingredients, e.g., by a method comprising granulation techniques such as crystallization, precipitation, pan-coating, fluid bed coating, fluid bed agglomeration, rotary atomization, extrusion, prilling, spheronization, size reduction methods, drum granulation, and/or high shear granulation.
Methods for preparing the core can be found in Handbook of Powder Technology; Particle size enlargement by C. E. Capes; Volume 1; 1980; Elsevier. Preparation methods include known feed and granule formulation technologies, e.g.:
The core may include additional materials such as fillers, fibre materials (cellulose or synthetic fibres), stabilizing agents, solubilizing agents, suspension agents, viscosity regulating agents, light spheres, plasticizers, salts, lubricants and fragrances.
The core may include a binder, such as synthetic polymer, wax, fat, or carbohydrate.
The core may include a salt of a multivalent cation, a reducing agent, an antioxidant, a peroxide decomposing catalyst and/or an acidic buffer component, typically as a homogenous blend.
In one embodiment, the core comprises a material selected from the group consisting of salts (such as calcium acetate, calcium benzoate, calcium carbonate, calcium chloride, calcium citrate, calcium sorbate, calcium sulfate, potassium acetate, potassium benzoate, potassium carbonate, potassium chloride, potassium citrate, potassium sorbate, potassium sulfate, sodium acetate, sodium benzoate, sodium carbonate, sodium chloride, sodium citrate, sodium sulfate, zinc acetate, zinc benzoate, zinc carbonate, zinc chloride, zinc citrate, zinc sorbate, zinc sulfate), starch or a sugar or sugar derivative (such as e.g. sucrose, dextrin, glucose, lactose, sorbitol), sugar or sugar derivative (such as e.g. sucrose, dextrin, glucose, lactose, sorbitol), small organic molecules, starch, flour, cellulose and minerals and clay minerals (also known as hydrous aluminium phyllosilicates). In one embodiment, the core comprises a clay mineral such as kaolinite or kaolin.
The core may include an inert particle with the enzyme absorbed into it, or applied onto the surface, e.g., by fluid bed coating.
The core may have a diameter of 20-2000 μm, particularly 50-1500 μm, 100-1500 μm or 250-1200 μm.
The core may be surrounded by at least one coating, e.g., to improve the storage stability, to reduce dust formation during handling, or for coloring the granule. The optional coating(s) may include a salt and/or wax and/or flour coating, or other suitable coating materials.
The coating may be applied in an amount of at least 0.1% by weight of the core, e.g., at least 0.5%, 1% or 5%. The amount may be at most 100%, 70%, 50%, 40% or 30%.
The coating is preferably at least 0.1 μm thick, particularly at least 0.5 μm, at least 1 μm or at least 5 μm. In some embodiments the thickness of the coating is below 100 μm, such as below 60 μm, or below 40 μm.
The coating should encapsulate the core unit by forming a substantially continuous layer. A substantially continuous layer is to be understood as a coating having few or no holes, so that the core unit is encapsulated or enclosed with few or no uncoated areas. The layer or coating should in particular be homogeneous in thickness.
The coating can further contain other materials as known in the art, e.g., fillers, antisticking agents, pigments, dyes, plasticizers and/or binders, such as titanium dioxide, kaolin, calcium carbonate or talc.
The granule may comprise a core comprising the polypeptide having SOD activity of the invention, one or more salt coatings and one or more wax coatings. Examples of enzyme granules with multiple coatings are shown in WO1993/07263, WO1997/23606 and WO2016/149636.
A salt coating may comprise at least 60% by weight of a salt, e.g., at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95% or at least 99% by weight.
The salt may be added from a salt solution where the salt is completely dissolved or from a salt suspension wherein the fine particles are less than 50 μm, such as less than 10 μm or less than 5 μm.
The salt coating may comprise a single salt or a mixture of two or more salts. The salt may be water soluble, in particular having a solubility at least 0.1 g in 100 g of water at 20° C., preferably at least 0.5 g per 100 g water, e.g., at least 1 g per 100 g water, e.g., at least 5 g per 100 g water.
The salt may be an inorganic salt, e.g., salts of sulfate, sulfite, phosphate, phosphonate, nitrate, chloride or carbonate or salts of simple organic acids (less than 10 carbon atoms, e.g., 6 or less carbon atoms) such as citrate, malonate or acetate. Examples of cations in these salts are alkali or earth alkali metal ions, the ammonium ion or metal ions of the first transition series, such as sodium, potassium, magnesium, calcium, zinc or aluminium. Examples of anions include chloride, bromide, iodide, sulfate, sulfite, bisulfite, thiosulfate, phosphate, monobasic phosphate, dibasic phosphate, hypophosphite, dihydrogen pyrophosphate, tetraborate, borate, carbonate, bicarbonate, metasilicate, citrate, malate, maleate, malonate, succinate, sorbate, lactate, formate, acetate, butyrate, propionate, benzoate, tartrate, ascorbate or gluconate. In particular alkali- or earth alkali metal salts of sulfate, sulfite, phosphate, phosphonate, nitrate, chloride or carbonate or salts of simple organic acids such as citrate, malonate or acetate may be used.
The salt in the coating may have a constant humidity at 20° C. above 60%, particularly above 70%, above 80% or above 85%, or it may be another hydrate form of such a salt (e.g., anhydrate). The salt coating may be as described in WO1997/05245, WO1998/54980, WO1998/55599, WO2000/70034, WO2006/034710, WO2008/017661, WO2008/017659, WO2000/020569, WO2001/004279, WO1997/05245, WO2000/01793, WO2003/059086, WO2003/059087, WO2007/031483, WO2007/031485, WO2007/044968, WO2013/192043, WO2014/014647 and WO2015/197719 or polymer coating such as described in WO 2001/00042.
Specific examples of suitable salts are NaCl (CH20° C.=76%), Na2CO3 (CH20° C.=92%), NaNO3 (CH20° C.=73%), Na2HPO4 (CH20° C.=95%), Na3PO4 (CH25° C.=92%), NH4Cl (CH20° C.=79.5%), (NH4)2HPO4 (CH20° C.=93.0%), NH4H2PO4 (CH20° C.=93.1%), (NH4)2SO4 (CH20° C.=81.1%), KCl (CH20° C.=85%), K2HPO4 (CH20° C.=92%), KH2PO4 (CH20° C.=96.5%), KNO3 (CH20° C.=93.5%), Na2SO4 (CH20° C.=93%), K2504 (CH20° C.=98%), KHSO4 (CH20° C.=86%), MgSO4 (CH20° C.=90%), ZnSO4 (CH20° C.=90%) and sodium citrate (CH25° C.=86%). Other examples include NaH2PO4, (NH4)H2PO4, CuSO4, Mg(NO3)2, magnesium acetate, calcium acetate, calcium benzoate, calcium carbonate, calcium chloride, calcium citrate, calcium sorbate, calcium sulfate, potassium acetate, potassium benzoate, potassium carbonate, potassium chloride, potassium citrate, potassium sorbate, sodium acetate, sodium benzoate, sodium citrate, sodium sulfate, zinc acetate, zinc benzoate, zinc carbonate, zinc chloride, zinc citrate and zinc sorbate.
The salt may be in anhydrous form, or it may be a hydrated salt, i.e. a crystalline salt hydrate with bound water(s) of crystallization, such as described in WO 99/32595. Specific examples include anhydrous sodium sulfate (Na2SO4), anhydrous magnesium sulfate (MgSO4), magnesium sulfate heptahydrate (MgSO4.7H2O), zinc sulfate heptahydrate (ZnSO4.7H2O), sodium phosphate dibasic heptahydrate (Na2HPO4.7H2O), magnesium nitrate hexahydrate (Mg(NO3)2(6H2O)), sodium citrate dihydrate and magnesium acetate tetrahydrate.
Preferably the salt is applied as a solution of the salt, e.g., using a fluid bed.
A wax coating may comprise at least 60% by weight of a wax, e.g., at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95% or at least 99% by weight.
Specific examples of waxes are polyethylene glycols; polypropylenes; Carnauba wax; Candelilla wax; bees wax; hydrogenated plant oil or animal tallow such as polyethylene glycol (PEG), methyl hydroxy-propyl cellulose (MHPC), polyvinyl alcohol (PVA), hydrogenated ox tallow, hydrogenated palm oil, hydrogenated cotton seeds and/or hydrogenated soy bean oil; fatty acid alcohols; mono-glycerides and/or di-glycerides, such as glyceryl stearate, wherein stearate is a mixture of stearic and palmitic acid; micro-crystalline wax; paraffin's; and fatty acids, such as hydrogenated linear long chained fatty acids and derivatives thereof. A preferred wax is palm oil or hydrogenated palm oil.
Non-dusting granulates may be produced, e.g., as disclosed in U.S. Pat. Nos. 4,106,991 and 4,661,452 and may optionally be coated by methods known in the art. The coating materials can be waxy coating materials and film-forming coating materials. Examples of waxy coating materials are poly(ethylene oxide) products (polyethyleneglycol, PEG) with mean molar weights of 1000 to 20000; ethoxylated nonylphenols having from 16 to 50 ethylene oxide units; ethoxylated fatty alcohols in which the alcohol contains from 12 to 20 carbon atoms and in which there are 15 to 80 ethylene oxide units; fatty alcohols; fatty acids; and mono- and di- and triglycerides of fatty acids. Examples of film-forming coating materials suitable for application by fluid bed techniques are given in GB 1483591.
The granulate may further comprise one or more additional enzymes. Each enzyme will then be present in more granules securing a more uniform distribution of the enzymes, and also reduces the physical segregation of different enzymes due to different particle sizes. Methods for producing multi-enzyme co-granulates is disclosed in the ip.com disclosure IPCOM000200739D.
Animal feed compositions or diets have a relatively high content of protein. Poultry and pig diets can be characterised as indicated in Table B of WO 01/58275, columns 2-3. Fish diets can be characterised as indicated in column 4 of this Table B. Furthermore, such fish diets usually have a crude fat content of 200-310 g/kg.
An animal feed composition according to the invention has a crude protein content of 50-800 g/kg, and furthermore comprises one or more polypeptides having SOD activity as described herein.
Furthermore, or in the alternative (to the crude protein content indicated above), the animal feed composition of the invention has a content of metabolisable energy of 10-30 MJ/kg; and/or a content of calcium of 0.1-200 g/kg; and/or a content of available phosphorus of 0.1-200 g/kg; and/or a content of methionine of 0.1-100 g/kg; and/or a content of methionine plus cysteine of 0.1-150 g/kg; and/or a content of lysine of 0.5-50 g/kg.
In particular embodiments, the content of metabolisable energy, crude protein, calcium, phosphorus, methionine, methionine plus cysteine, and/or lysine is within any one of ranges 2, 3, 4 or 5 in Table B of WO 01/58275 (R. 2-5).
Crude protein is calculated as nitrogen (N) multiplied by a factor 6.25, i.e. Crude protein (g/kg)=N (g/kg)×6.25. The nitrogen content is determined by the Kjeldahl method (A.O.A.C., 1984, Official Methods of Analysis 14th ed., Association of Official Analytical Chemists, Washington DC).
Metabolisable energy can be calculated on the basis of the NRC publication Nutrient requirements in swine, ninth revised edition 1988, subcommittee on swine nutrition, committee on animal nutrition, board of agriculture, national research council. National Academy Press, Washington, D.C., pp. 2-6, and the European Table of Energy Values for Poultry Feed-stuffs, Spelderholt centre for poultry research and extension, 7361 DA Beekbergen, The Netherlands. Grafisch bedrijf Ponsen & Iooijen by, Wageningen. ISBN 90-71463-12-5.
The dietary content of calcium, available phosphorus and amino acids in complete animal diets is calculated on the basis of feed tables such as Veevoedertabel 1997, gegevens over chemische samenstelling, verteerbaarheid en voederwaarde van voedermiddelen, Central Veevoederbureau, Runderweg 6, 8219 pk Lelystad. ISBN 90-72839-13-7.
In a particular embodiment, the animal feed composition of the invention contains at least one vegetable protein as defined above.
The animal feed composition of the invention may also contain animal protein, such as Meat and Bone Meal, Feather meal, and/or Fish Meal, typically in an amount of 0-25%. The animal feed composition of the invention may also comprise Dried Distillers Grains with Solubles (DDGS), typically in amounts of 0-30%.
In still further particular embodiments, the animal feed composition of the invention contains 0-80% maize; and/or 0-80% sorghum; and/or 0-70% wheat; and/or 0-70% Barley; and/or 0-30% oats; and/or 0-40% soybean meal; and/or 0-25% fish meal; and/or 0-25% meat and bone meal; and/or 0-20% whey.
The animal feed may comprise vegetable proteins. In particular embodiments, the protein content of the vegetable proteins is at least 10, 20, 30, 40, 50, 60, 70, 80, or 90% (w/w). Vegetable proteins may be derived from vegetable protein sources, such as legumes and cereals, for example, materials from plants of the families Fabaceae (Leguminosae), Cruciferaceae, Chenopodiaceae, and Poaceae, such as soy bean meal, lupin meal, rapeseed meal, and combinations thereof.
In a particular embodiment, the vegetable protein source is material from one or more plants of the family Fabaceae, e.g., soybean, lupine, pea, or bean. In another particular embodiment, the vegetable protein source is material from one or more plants of the family Chenopodiaceae, e.g. beet, sugar beet, spinach or quinoa. Other examples of vegetable protein sources are rapeseed, and cabbage. In another particular embodiment, soybean is a preferred vegetable protein source. Other examples of vegetable protein sources are cereals such as barley, wheat, rye, oat, maize (corn), rice, and sorghum.
Animal diets can e.g. be manufactured as mash feed (non-pelleted) or pelleted feed. Typically, the milled feed-stuffs are mixed and sufficient amounts of essential vitamins and minerals are added according to the specifications for the species in question. Enzymes can be added as solid or liquid enzyme formulations. For example, for mash feed a solid or liquid enzyme formulation may be added before or during the ingredient mixing step. For pelleted feed the (liquid or solid) SOD/enzyme preparation may also be added before or during the feed ingredient step. Typically a liquid enzyme preparation comprises the SOD of the invention optionally with a polyol, such as glycerol, ethylene glycol or propylene glycol, and is added after the pelleting step, such as by spraying the liquid formulation onto the pellets. The SOD may also be incorporated in a feed additive or premix.
In an embodiment, the composition comprises one or more additional enzymes. In an embodiment, the composition comprises one or more microbes. In an embodiment, the composition comprises one or more vitamins. In an embodiment, the composition comprises one or more minerals. In an embodiment, the composition comprises one or more amino acids. In an embodiment, the composition comprises one or more other feed ingredients.
In another embodiment, the composition comprises one or more of the polypeptides of the invention, one or more formulating agents and one or more additional enzymes. In an embodiment, the composition comprises one or more of the polypeptides of the invention, one or more formulating agents and one or more microbes. In an embodiment, the composition comprises one or more of the polypeptides of the invention, one or more formulating agents and one or more vitamins. In an embodiment, the composition comprises one or more of the polypeptides of the invention and one or more minerals. In an embodiment, the composition comprises the polypeptide of the invention, one or more formulating agents and one or more amino acids. In an embodiment, the composition comprises one or more of the polypeptides of the invention, one or more formulating agents and one or more other feed ingredients.
In a further embodiment, the composition comprises one or more of the polypeptides of the invention, one or more formulating agents and one or more components selected from the list consisting of: one or more additional enzymes; one or more microbes; one or more vitamins; one or more minerals; one or more amino acids; and one or more other feed ingredients.
The final catalase concentration in the diet is within the range of 100 to 1000 mg enzyme protein per kg animal feed, such as 200 to 900 mg, 300 to 800 mg, 400 to 700 mg, 500 to 600 mg enzyme protein per kg animal feed, or any combination of these intervals.
The final catalase concentration in the diet can also be determined in Units/kg feed, which is within the range of 100 to 3000 Units per kg animal feed, such as 200 to 3000 U/kg, 300 to 2000 U/kg, 100 to 800 U/kg, 100 to 400 U/kg, or any combination of these intervals.
In another embodiment, the compositions described herein optionally include one or more enzymes for improving feed digestibility. Enzymes can be classified on the basis of the handbook Enzyme Nomenclature from NC-IUBMB, 1992), see also the ENZYME site at the internet: http://www.expasy.ch/enzyme/. ENZYME is a repository of information relative to the nomenclature of enzymes. It is primarily based on the recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (IUB-MB), Academic Press, Inc., 1992, and it describes each type of characterized enzyme for which an EC (Enzyme Commission) number has been provided (Bairoch A. The ENZYME database, 2000, Nucleic Acids Res 28:304-305). This IUB-MB Enzyme nomenclature is based on their substrate specificity and occasionally on their molecular mechanism; such a classification does not reflect the structural features of these enzymes.
Thus the composition of the invention may also comprise at least one other enzyme selected from the group comprising of acetylxylan esterase (EC 3.1.1.23), acylglycerol lipase (EC 3.1.1.72), alpha-amylase (EC 3.2.1.1), beta-amylase (EC 3.2.1.2), arabinofuranosidase (EC 3.2.1.55), cellobiohydrolases (EC 3.2.1.91), cellulase (EC 3.2.1.4), feruloyl esterase (EC 3.1.1.73), galactanase (EC 3.2.1.89), alpha-galactosidase (EC 3.2.1.22), beta-galactosidase (EC 3.2.1.23), beta-glucanase (EC 3.2.1.6), beta-glucosidase (EC 3.2.1.21), triacylglycerol lipase (EC 3.1.1.3), lysophospholipase (EC 3.1.1.5), alpha-mannosidase (EC 3.2.1.24), beta-mannosidase (mannanase) (EC 3.2.1.25), phytase (EC 3.1.3.8, EC 3.1.3.26, EC 3.1.3.72), phospholipase A1 (EC 3.1.1.32), phospholipase A2 (EC 3.1.1.4), phospholipase D (EC 3.1.4.4), pullulanase (EC 3.2.1.41), pectinesterase (EC 3.1.1.11), beta-xylosidase (EC 3.2.1.37), or any combination thereof.
In another embodiment, the animal feed may include one or more vitamins, such as one or more fat-soluble vitamins and/or one or more water-soluble vitamins. In another embodiment, the animal feed may optionally include one or more minerals, such as one or more trace minerals and/or one or more macro minerals.
Usually fat- and water-soluble vitamins, as well as trace minerals form part of a so-called premix intended for addition to the feed, whereas macro minerals are usually separately added to the feed.
Non-limiting examples of fat-soluble vitamins include vitamin A, vitamin D3, vitamin E, and vitamin K, e.g., vitamin K3.
Non-limiting examples of water-soluble vitamins include vitamin C, vitamin B12, biotin and choline, vitamin B1, vitamin B2, vitamin B6, niacin, folic acid and panthothenate, e.g., Ca-D-panthothenate.
Non-limiting examples of trace minerals include boron, cobalt, chloride, chromium, copper, fluoride, iodine, iron, manganese, molybdenum, iodine, selenium and zinc.
Non-limiting examples of macro minerals include calcium, magnesium, phosphorus, potassium and sodium.
In one embodiment, the amount of vitamins is 0.001% to 10% by weight of the composition. In one embodiment, the amount of minerals is 0.001% to 10% by weight of the composition.
The nutritional requirements of these components (exemplified with poultry and piglets/pigs) are listed in Table A of WO 01/58275. Nutritional requirement means that these components should be provided in the diet in the concentrations indicated.
In the alternative, the animal feed additive of the invention comprises at least one of the individual components specified in Table A of WO 01/58275. At least one means either of, one or more of, one, or two, or three, or four and so forth up to all thirteen, or up to all fifteen individual components. More specifically, this at least one individual component is included in the additive of the invention in such an amount as to provide an in-feed-concentration within the range indicated in column four, or column five, or column six of Table A.
In a still further embodiment, the animal feed additive of the invention comprises at least one of the below vitamins, preferably to provide an in-feed-concentration within the ranges specified in the below Table 1 (for piglet diets, and broiler diets, respectively).
In the suitable embodiments, the invention relates to an animal feed and a method of improving one or more performance parameters in an animal comprising administering to the animal an animal feed or animal feed additive comprising one or more polypeptides having catalase activity, wherein the one or more performance parameters is selected from the group consisting of the European Production Efficiency Factor (EPEF), Feed Conversion Ratio (FCR), Growth Rate (GR), Body Weight Gain (WG), Mortality Rate (MR) and Flock Uniformity (FU).
These features are supported by examples 1 2, 3, and 4. As it is generally known, an improved FCR is lower than the control FCR. In particular embodiments, the FCR is improved (i.e., reduced) as compared to the control by at least 1.0%, preferably at least 1.5%, 1.6%, 1.7%, 1.8%, 1.9%, 2.0%, 2.1%, 2.2%, 2.3%, 2.4%, or at least 2.5%.
The term “mortality” as used herein refers to the ratio of life animals at the end of the growth phase versus the number of animals originally included into the pond. It may be determined on the basis of a fish challenge trial comprising two groups of fish challenged by a particular fish pathogen with the aim to provoke a mortality of 40 to 80% of the animals in the untreated group. However, in the challenge group fed with a suitable concentration per Kg of feed of a mixture of at least two compounds according to the invention, the mortality is reduced compared to the untreated group by at least 5%, preferably at least, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, or at least 50%.
In some embodiments, the invention relates to an animal feed and a method of improving or enhancing immune response and/or reducing inflammation and/or for the modulation of the gut flora in an animal comprising administering to the animal an animal feed or animal feed additive comprising one or more polypeptides having superoxide dismutase activity.
These features are supported by example 1 as the first two features are very much linked to oxidative stress. Different in-vitro models tested by the applicant also show that SODs optionally in combinations with a catalase are very effective to decrease oxidative stress/burst.
Dysregulating effects of heat stress and oxidative stress also help in maintaining gut integrity and function. Therefore, the invention also supports a positive modulation of the gut flora, in particular of the microbial gut flora.
The term “gut” as used herein designates the gastrointestinal or digestive tract (also referred to as the alimentary canal) and it refers to the system of organs within multi-cellular animals which takes in food, digests it to extract energy and nutrients, and expels the remaining waste.
The term gut “microflora” as used herein refers to the natural microbial cultures residing in the gut and maintaining health by aiding in proper digestion.
The term “modulate” as used herein in connection with the gut microflora generally means to change, manipulate, alter, or adjust the function or status thereof in a healthy and normally functioning animal, i.e. a non-therapeutic use.
The term “supporting immune system function” as used herein refers to the immune stimulation effect obtained by the compounds according to the invention.
In the fifth and sixth embodiment, the invention relates to a method of reducing or eliminating the use of antibiotics administered to animal feed or to a method of reducing cellular markers of reactive oxygen species or free radicals in animal body comprising administering to the animal an animal feed or animal feed additive comprising one or more polypeptides having catalase activity. These embodiments are supported by examples 1 to 4.
In the seventh embodiment, the invention relates to an animal feed additive or animal feed premix comprising one or more polypeptides having superoxide dismutase (SOD), wherein the feed additive or premix further comprises
As shown in example 1, such a premix has strong antioxidative properties and can be used, optionally in combination with selenium as an antioxidant in feed and feed premixes or as a replacement or partial replacement of antibiotics in animal feed.
The protein source of the animal feed is selected from the group consisting of soybean, wild soybean, beans, lupin, tepary bean, scarlet runner bean, slimjim bean, lima bean, French bean, Broad bean (fava bean), chickpea, lentil, peanut, Spanish peanut, canola, sunflower seed, cotton seed, rapeseed (oilseed rape) or pea or in a processed form such as soybean meal, full fat soy bean meal, soy protein concentrate (SPC), fermented soybean meal (FSBM), sunflower meal, cotton seed meal, rapeseed meal, fish meal, bone meal, feather meal, whey or any combination thereof.
The energy source of the animal feed is selected from the group consisting of maize, corn, sorghum, barley, wheat, oats, rice, triticale, rye, beet, sugar beet, spinach, potato, cassava, quinoa, cabbage, switchgrass, millet, pearl millet, foxtail millet or in a processed form such as milled corn, milled maize, potato starch, cassava starch, milled sorghum, milled switchgrass, milled millet, milled foxtail millet, milled pearl millet, or any combination thereof.
In a preferred example, the animal feed further comprises one or more components selected from the list consisting of one or more additional enzymes; one or more microbes; one or more vitamins; one or more minerals; one or more amino acids; and one or more other feed ingredients, as described herein.
In a further embodiment, the invention relates to an animal feed additive or animal feed premix comprising one or more polypeptides having catalase activity, wherein the feed additive or premix further comprises
A preferred example of the catalase according to the invention is a polypeptide having at least 80% sequence identity to SEQ ID NO: 1 and SEQ ID NO: 2, SEQ ID NO: 3 and SEQ ID NO 4, SEQ ID NO: 5 and SEQ ID NO: 6.
A preferred animal feed premix (animal feed additive) comprises one or more polypeptides having catalase activity, vitamin E and optionally selenium and is used as antioxidant, preferably in feed and feed premixes or as a replacement or partial replacement of antibiotics in animal feed.
Examples of commercial vitamin E and selenium are Rovimix® E50 and SePlex (DSM Nutritional Products).
The polypeptide having catalase activity of the invention may be formulated as a liquid or a solid. For a liquid formulation, the formulating agent may comprise a polyol (such as e.g. glycerol, ethylene glycol or propylene glycol), a salt (such as e.g. sodium chloride, sodium benzoate, potassium sorbate) or a sugar or sugar derivative (such as e.g. dextrin, glucose, sucrose, and sorbitol). Thus, in one embodiment, the composition is a liquid composition comprising the polypeptide of the invention and one or more formulating agents selected from the list consisting of glycerol, ethylene glycol, 1,2-propylene glycol, 1,3-propylene glycol, sodium chloride, sodium benzoate, potassium sorbate, dextrin, glucose, sucrose, and sorbitol. The liquid formulation may be sprayed onto the feed after it has been pelleted or may be added to drinking water given to the animals.
In one embodiment, the liquid formulation further comprises 20%-80% polyol (i.e. total amount of polyol), preferably 25%-75% polyol, more preferably 30%-70% polyol, more preferably 35%-65% polyol or most preferably 40%-60% polyol. In one embodiment, the liquid formulation comprises 20%-80% polyol, preferably 25%-75% polyol, more preferably 30%-70% polyol, more preferably 35%-65% polyol or most preferably 40%-60% polyol wherein the polyol is selected from the group consisting of glycerol, sorbitol, propylene glycol (MPG), ethylene glycol, diethylene glycol, triethylene glycol, 1, 2-propylene glycol or 1, 3-propylene glycol, dipropylene glycol, polyethylene glycol (PEG) having an average molecular weight below about 600 and polypropylene glycol (PPG) having an average molecular weight below about 600. In one embodiment, the liquid formulation comprises 20%-80% polyol (i.e. total amount of polyol), preferably 25%-75% polyol, more preferably 30%-70% polyol, more preferably 35%-65% polyol or most preferably 40%-60% polyol wherein the polyol is selected from the group consisting of glycerol, sorbitol and propylene glycol (MPG).
In one embodiment, the liquid formulation further comprises preservative, preferably selected from the group consisting of sodium sorbate, potassium sorbate, sodium benzoate and potassion benzoate or any combination thereof. In one embodiment, the liquid formulation comprises 0.02% to 1.5% w/w preservative, more preferably 0.05% to 1.0% w/w preservative or most preferably 0.1% to 0.5% w/w preservative. In one embodiment, the liquid formulation comprises 0.001% to 2.0% w/w preservative (i.e. total amount of preservative), preferably 0.02% to 1.5% w/w preservative, more preferably 0.05% to 1.0% w/w preservative or most preferably 0.1% to 0.5% w/w preservative wherein the preservative is selected from the group consisting of sodium sorbate, potassium sorbate, sodium benzoate and potassium benzoate or any combination thereof.
For a solid formulation, the formulation may be for example as a granule, spray dried powder or agglomerate (e.g. as disclosed in WO2000/70034). The formulating agent may comprise a salt (organic or inorganic zinc, sodium, potassium or calcium salts such as e.g. such as calcium acetate, calcium benzoate, calcium carbonate, calcium chloride, calcium citrate, calcium sorbate, calcium sulfate, potassium acetate, potassium benzoate, potassium carbonate, potassium chloride, potassium citrate, potassium sorbate, potassium sulfate, sodium acetate, sodium benzoate, sodium carbonate, sodium chloride, sodium citrate, sodium sulfate, zinc acetate, zinc benzoate, zinc carbonate, zinc chloride, zinc citrate, zinc sorbate, zinc sulfate), starch or a sugar or sugar derivative (such as e.g. sucrose, dextrin, glucose, lactose, sorbitol).
In one embodiment, the composition is a solid composition, such as a spray dried composition, comprising the polypeptide having catalase activity of the invention and one or more formulating agents selected from the list consisting of sodium chloride, sodium benzoate, potassium sorbate, sodium sulfate, potassium sulfate, magnesium sulfate, sodium thiosulfate, calcium carbonate, sodium citrate, dextrin, glucose, sucrose, sorbitol, lactose, starch and cellulose. In a preferred embodiment, the formulating agent is selected from one or more of the following compounds: sodium sulfate, dextrin, cellulose, sodium thiosulfate, magnesium sulfate and calcium carbonate.
The present invention also relates to enzyme granules/particles comprising the polypeptide having catalase activity of the invention optionally combined with one or more additional enzymes. The granule is composed of a core, and optionally one or more coatings (outer layers) surrounding the core.
Typically, the granule/particle size, measured as equivalent spherical diameter (volume based average particle size), of the granule is 20-2000 μm, particularly 50-1500 μm, 100-1500 μm or 250-1200 μm.
The core can be prepared by granulating a blend of the ingredients, e.g., by a method comprising granulation techniques such as crystallization, precipitation, pan-coating, fluid bed coating, fluid bed agglomeration, rotary atomization, extrusion, prilling, spheronization, size reduction methods, drum granulation, and/or high shear granulation.
Methods for preparing the core can be found in Handbook of Powder Technology; Particle size enlargement by C. E. Capes; Volume 1; 1980; Elsevier. Preparation methods include known feed and granule formulation technologies, e.g.:
The core may include additional materials such as fillers, fibre materials (cellulose or synthetic fibres), stabilizing agents, solubilizing agents, suspension agents, viscosity regulating agents, light spheres, plasticizers, salts, lubricants and fragrances.
The core may include a binder, such as synthetic polymer, wax, fat, or carbohydrate.
The core may include a salt of a multivalent cation, a reducing agent, an antioxidant, a peroxide decomposing catalyst and/or an acidic buffer component, typically as a homogenous blend.
In one embodiment, the core comprises a material selected from the group consisting of salts (such as calcium acetate, calcium benzoate, calcium carbonate, calcium chloride, calcium citrate, calcium sorbate, calcium sulfate, potassium acetate, potassium benzoate, potassium carbonate, potassium chloride, potassium citrate, potassium sorbate, potassium sulfate, sodium acetate, sodium benzoate, sodium carbonate, sodium chloride, sodium citrate, sodium sulfate, zinc acetate, zinc benzoate, zinc carbonate, zinc chloride, zinc citrate, zinc sorbate, zinc sulfate), starch or a sugar or sugar derivative (such as e.g. sucrose, dextrin, glucose, lactose, sorbitol), sugar or sugar derivative (such as e.g. sucrose, dextrin, glucose, lactose, sorbitol), small organic molecules, starch, flour, cellulose and minerals and clay minerals (also known as hydrous aluminium phyllosilicates). In one embodiment, the core comprises a clay mineral such as kaolinite or kaolin.
The core may include an inert particle with the enzyme absorbed into it, or applied onto the surface, e.g., by fluid bed coating.
The core may have a diameter of 20-2000 μm, particularly 50-1500 μm, 100-1500 μm or 250-1200 μm.
The core may be surrounded by at least one coating, e.g., to improve the storage stability, to reduce dust formation during handling, or for coloring the granule. The optional coating(s) may include a salt and/or wax and/or flour coating, or other suitable coating materials.
The coating may be applied in an amount of at least 0.1% by weight of the core, e.g., at least 0.5%, 1% or 5%. The amount may be at most 100%, 70%, 50%, 40% or 30%.
The coating is preferably at least 0.1 μm thick, particularly at least 0.5 μm, at least 1 μm or at least 5 μm. In some embodiments the thickness of the coating is below 100 μm, such as below 60 μm, or below 40 μm.
The coating should encapsulate the core unit by forming a substantially continuous layer. A substantially continuous layer is to be understood as a coating having few or no holes, so that the core unit is encapsulated or enclosed with few or no uncoated areas. The layer or coating should in particular be homogeneous in thickness.
The coating can further contain other materials as known in the art, e.g., fillers, antisticking agents, pigments, dyes, plasticizers and/or binders, such as titanium dioxide, kaolin, calcium carbonate or talc.
The granule may comprise a core comprising the polypeptide having catalase activity of the invention, one or more salt coatings and one or more wax coatings. Examples of enzyme granules with multiple coatings are shown in WO1993/07263, WO1997/23606 and WO2016/149636.
A salt coating may comprise at least 60% by weight of a salt, e.g., at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95% or at least 99% by weight.
The salt may be added from a salt solution where the salt is completely dissolved or from a salt suspension wherein the fine particles are less than 50 μm, such as less than 10 μm or less than 5 μm.
The salt coating may comprise a single salt or a mixture of two or more salts. The salt may be water soluble, in particular having a solubility at least 0.1 g in 100 g of water at 20° C., preferably at least 0.5 g per 100 g water, e.g., at least 1 g per 100 g water, e.g., at least 5 g per 100 g water.
The salt may be an inorganic salt, e.g., salts of sulfate, sulfite, phosphate, phosphonate, nitrate, chloride or carbonate or salts of simple organic acids (less than 10 carbon atoms, e.g., 6 or less carbon atoms) such as citrate, malonate or acetate. Examples of cations in these salts are alkali or earth alkali metal ions, the ammonium ion or metal ions of the first transition series, such as sodium, potassium, magnesium, calcium, zinc or aluminium. Examples of anions include chloride, bromide, iodide, sulfate, sulfite, bisulfite, thiosulfate, phosphate, monobasic phosphate, dibasic phosphate, hypophosphite, dihydrogen pyrophosphate, tetraborate, borate, carbonate, bicarbonate, metasilicate, citrate, malate, maleate, malonate, succinate, sorbate, lactate, formate, acetate, butyrate, propionate, benzoate, tartrate, ascorbate or gluconate. In particular alkali- or earth alkali metal salts of sulfate, sulfite, phosphate, phosphonate, nitrate, chloride or carbonate or salts of simple organic acids such as citrate, malonate or acetate may be used.
The salt in the coating may have a constant humidity at 20° C. above 60%, particularly above 70%, above 80% or above 85%, or it may be another hydrate form of such a salt (e.g., anhydrate). The salt coating may be as described in WO1997/05245, WO1998/54980, WO1998/55599, WO2000/70034, WO2006/034710, WO2008/017661, WO2008/017659, WO2000/020569, WO2001/004279, WO1997/05245, WO2000/01793, WO2003/059086, WO2003/059087, WO2007/031483, WO2007/031485, WO2007/044968, WO2013/192043, WO2014/014647 and WO2015/197719 or polymer coating such as described in WO 2001/00042.
Specific examples of suitable salts are NaCl (CH20° C.=76%), Na2CO3 (CH20° C.=92%), NaNO3 (CH20° C.=73%), Na2HPO4 (CH20° C.=95%), Na3PO4 (CH25° C.=92%), NH4Cl (CH20° C.=79.5%), (NH4)2HPO4 (CH20° C.=93.0%), NH4H2PO4 (CH20° C.=93.1%), (NH4)2SO4 (CH20° C.=81.1%), KCl (CH20° C.=85%), K2HPO4 (CH20° C.=92%), KH2PO4. (CH20° C.=96.5%), KNO3 (CH20° C.=93.5%), Na2SO4 (CH20° C.=93%), K2SO4 (CH20° C.=98%), KHSO4 (CH20° C.=86%), MgSO4 (CH20° C.=90%), ZnSO4 (CH20° C.=90%) and sodium citrate (CH25° C.=86%). Other examples include NaH2PO4, (NH4)H2PO4, CuSO4, Mg(NO3)2, magnesium acetate, calcium acetate, calcium benzoate, calcium carbonate, calcium chloride, calcium citrate, calcium sorbate, calcium sulfate, potassium acetate, potassium benzoate, potassium carbonate, potassium chloride, potassium citrate, potassium sorbate, sodium acetate, sodium benzoate, sodium citrate, sodium sulfate, zinc acetate, zinc benzoate, zinc carbonate, zinc chloride, zinc citrate and zinc sorbate.
The salt may be in anhydrous form, or it may be a hydrated salt, i.e. a crystalline salt hydrate with bound water(s) of crystallization, such as described in WO 99/32595. Specific examples include anhydrous sodium sulfate (Na2SO4), anhydrous magnesium sulfate (MgSO4), magnesium sulfate heptahydrate (MgSO4·7H2O), zinc sulfate heptahydrate (ZnSO4·7H2O), sodium phosphate dibasic heptahydrate (Na2HPO4·7H2O), magnesium nitrate hexahydrate (Mg(NO3)2(6H2O)), sodium citrate dihydrate and magnesium acetate tetrahydrate.
Preferably the salt is applied as a solution of the salt, e.g., using a fluid bed.
A wax coating may comprise at least 60% by weight of a wax, e.g., at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95% or at least 99% by weight.
Specific examples of waxes are polyethylene glycols; polypropylenes; Carnauba wax; Candelilla wax; bees wax; hydrogenated plant oil or animal tallow such as polyethylene glycol (PEG), methyl hydroxy-propyl cellulose (MHPC), polyvinyl alcohol (PVA), hydrogenated ox tallow, hydrogenated palm oil, hydrogenated cotton seeds and/or hydrogenated soy bean oil; fatty acid alcohols; mono-glycerides and/or di-glycerides, such as glyceryl stearate, wherein stearate is a mixture of stearic and palmitic acid; micro-crystalline wax; paraffin's; and fatty acids, such as hydrogenated linear long chained fatty acids and derivatives thereof. A preferred wax is palm oil or hydrogenated palm oil.
Non-dusting granulates may be produced, e.g., as disclosed in U.S. Pat. Nos. 4,106,991 and 4,661,452 and may optionally be coated by methods known in the art. The coating materials can be waxy coating materials and film-forming coating materials. Examples of waxy coating materials are poly(ethylene oxide) products (polyethyleneglycol, PEG) with mean molar weights of 1000 to 20000; ethoxylated nonylphenols having from 16 to 50 ethylene oxide units; ethoxylated fatty alcohols in which the alcohol contains from 12 to 20 carbon atoms and in which there are 15 to 80 ethylene oxide units; fatty alcohols; fatty acids; and mono- and di- and triglycerides of fatty acids. Examples of film-forming coating materials suitable for application by fluid bed techniques are given in GB 1483591.
The granulate may further comprise one or more additional enzymes. Each enzyme will then be present in more granules securing a more uniform distribution of the enzymes, and also reduces the physical segregation of different enzymes due to different particle sizes. Methods for producing multi-enzyme co-granulates is disclosed in the ip.com disclosure IPCOM000200739D.
Escherichia coli Top-10 strain purchased from Invitrogen (Thermofisher Inc.) was used to propagate our expression vector.
Aspergillus oryzae strain MT3568 (described in WO2015040159) was used for heterologous expression of the genes described in Table 1.
DAP4C medium is composed of 11 g MgSO4·7H2O, 1 g KH2PO4, 2.2 g Citric acid·H2O, 20 g glucose, 10 g maltose, 5.2 g K3PO4·H2O, 0.5 g yeast extract, 1.25 g CaCO3, 0.5 ml AMG Trace element solution and deionized water to 1 liter. After autoclaving, 3.3 ml of 20% Lactic Acid (autoclaved) and 9.3 ml of 50% (NH4)2HPO4 (sterile filtered) are added to every 400 ml of the above medium.
AMG Trace element solution is composed of 6.8 g ZnCl2, 2.5 g CuSO4·5H2O, 0.24 g NiCl2·5H2O, 13.9 g FeSO4·7H2O, 13.6 g MnSO4·5H2O, 3 g Citric acid·H2O, and deionised water to 1000 ml.
LB plates are composed of 10 g of Bacto-tryptone, 5 g of yeast extract, 10 g of sodium chloride, 15 g of Bacto-agar, and deionised water to 1000 ml.
LB medium is composed of 1 g of Bacto-tryptone, 5 g of yeast extract, and 10 g of sodium chloride, and deionised water to 1000 ml.
COVE sucrose plates are composed of 342 g of sucrose, 20 g of agar powder, 20 ml of COVE salt solution, and deionized water to 1 liter. The medium was sterilized by autoclaving. For the transformation of MT3568, 10 mM acetamide was added, when the medium was cooled to 60° C.
COVE-2 plate/tube for isolation if single transformants: 30 g/L sucrose, 20 ml/L COVE salt solution, 10 mM acetamide, 30 g/L noble agar (Difco, Cat #214220).
COVE salt solution is composed of 26 g of MgSO4·7H2O, 26 g of KCL, 26 g of KH2PO4, 50 ml of COVE trace metal solution, and deionised water to 1000 ml.
COVE trace metal solution is composed of 0.04 g of Na2B4O7·10H2O, 0.4 g of CuSO4·5H2O, 1.2 g of FeSO4·7H2O, 0.7 g of MnSO4·H2O, 0.8 g of Na2MoO4·2H2O, 10 g of ZnSO4·7H2O, and deionised water to 1000 ml.
The catalase genes were derived from fungal strains isolated from environmental samples using standard microbiological isolation techniques. The donor strains HEAL7001, was identified, and taxonomy assigned based on the DNA sequencing of the ITS (Table 1). The donor fungal organism for HEAL7060 was Curvularia verruculosa, a publicly available strain originally isolated from a grass inflorescence in The Gambian Republic, Africa. The strain was originally collected in 1966: Curvularia verruculosa Tandon & Bilgrami ex M. B. Ellis, Mycological Papers 106: 20 (1966).
Chromosomal DNA from individual strains was isolated by QIAamp Dneasy Kit (Qiagen, Hilden, Germany). 5 μg of each genomic DNA sample were sent for full genome sequencing using Illumina technology. Genome sequencing, the subsequent assembly of reads and the gene discovery (i.e. annotation of gene functions) is known to persons skilled in the art and the service can also be purchased commercially.
The genome sequences were BLAST analyzed for putative catalase from the PFAM database families PF00199 and PF18011. This analysis identified genes encoding putative catalases, which were subsequently cloned and recombinantly expressed in Aspergillus oryzae.
The catalase genes were amplified by PCR respectively from above isolated genomic DNA. The purified PCR products were cloned into the previously digested pDau109 by ligation with an IN-FUSION™ CF Dry-down Cloning Kit (Clontech Laboratories, Inc., Mountain View, CA, USA) according to the manufacturer's instructions. The plasmid pDAu109 and its use are described in (WO 2005/042735). The ligation mixture was used to transform E. coli TOP10 chemically competent cells (described in Strains). The cloned genes were sequenced and confirmed to be identical to the corresponding genes found in the genome sequences and transformed into the Aspergillus oryzae strain MT3568 (WO 11/057140) by the methods described in Christensen et al., 1988, Biotechnology 6, 1419-1422 and WO 04/032648. Transformants were selected during regeneration from protoplasts based on the ability, conferred by a selectable marker in the expression vector, to utilize acetamide as a nitrogen source, and were subsequently re-isolated under selection.
Production of the recombinant catalase peptides was evaluated by culturing the transformants in 96-well deep-well microtiter plates for 4 days at 30° C. in either a 0.25 ml or 0.75 ml volume of either or both YPG medium (WO 05/066338) or DAP-4C-1 medium (WO 12/103350) and monitoring peptide expression by SDS-PAGE. A single Aspergillus transformant was selected for each gene based on expression yields as evaluated in microtiter plate fermentation.
Spores of the best expressed transformant were spread on COVE-2 plates for re-isolation in order to isolate single colonies. Then a single colony was spread on a COVE-2 tube until sporulation.
For larger-scale production of the recombinant enzymes, and the Aspergillus transformants were cultured in 500 ml baffled flasks containing 150 ml of fermentation medium. Transformants expressing the catalase peptides were fermented in DAP-4C-1 medium (WO 12/103350). The cultures were shaken on a rotary table at 150 RPM at for 4 days, and the broth was subsequently separated from cellular material by passage through a 0.22 um filtration unit.
The catalase from Bovine Liver (Sigma®, Enzyme Commission (EC) Number: 1.11.1.6, CAS Number: 9001-05-2, Molecular weight: 250 kDa) has an activity of 3524 U/mg EP. Catalase activity was determined by H2O2 reduction detected at 240 nm. Firstly, catalase was diluted with different dilution times by MQ water and 0.01% Triton X-100. 10 μl enzyme sample, 90 μl activity buffer (K2HPO4/KH2PO4 mixed with final concentration of 100 mM PBS at pH7.0) were added into 50 μl 0.2% H2O2 solution (30% H2O2 was diluted to 0.2% in activity buffer). The mixture was measured at 240 nm for 10 minutes at room temperature (interval 34 sec, shake before first read). The commercial catalase from Sigma®, catalase from bovine liver (C1345), was set as reference. This allows for the selection of the suitable enzyme dosage.
Gastric stability was assayed with artificial gastric juice as stress condition. 10 μl catalase with appropriate dilution was added into 90 μl stress buffer (100 mM NaCl, 0.0013M HCl at pH3.0). The stress buffer with pepsin was prepared by adding 1.11 mg/ml pepsin (from porcine gastric mucosa, P7000, Sigma, 474U/mg) as pH3+pepsin buffer, and also was incubated with 10 ul catalase. The mixture was incubated at 37° C. in thermomixer for 0, 30, 60 and 90 minutes separately. 10 μl sample extracted from the mixture was added into 90 μl activity buffer as stop mixture. Then 100 μl stop mixture was added with 50 μl 0.2% H2O2 solution to measure absorbance. The absorbance was measured at 240 nm for 10 minutes at room temperature (interval 34 sec, shake before first read). One slop could be calculated by OD vs min, which presents the activity. The activity at pH7.0 without stress condition was set as reference, and the residual activity at stress condition (pH3.0 or pH3.0+pepsin) compared with reference was calculated as relative stability.
All probiotic strains used in the experiments described here were confirmed by biotyping. Both facultative anaerobes and an aerobe bacterial strains were used.
In all experiments, the catalase used was SEQ ID NO:6 and the SOD used was SEQ ID NO: 28
An overnight culture of Weissella confusa (O14EVX) was grown from a glycerol stock in MRS media in a 15 mL tube with tight lid at 37 deg C. The next day, the OD600 was measured and the culture diluted with MRS media, hydrogen peroxide and/or catalase to a starting OD600 of 0.2 in a total volume of 2 mL MRS medium. Catalase was added in an amount of 0 U/ml, 0.1 U/ml, 0.5 U/ml, 1 U/ml, 5 U/ml, 10 U/ml, 50 U/ml, and 100 U/ml. The combinations of hydrogen peroxide and catalase were also tested. Cells were left o/n in the anaerobic box at 37 deg C. The next day, the OD600 of the cultures was measured in order to assess the effect of hydrogen and/or catalase.
Hydrogen peroxide stops the growth of Weissella confusa at around 5 mM H2O2. However, the culture is protected even with the lowest catalase concentration of 1 U/ml (at 5 mM H2O2). In the presence of 38 mM hydrogen peroxide, 5 U/mL of catalase was shown to be sufficient. Weissella confusa is a hetero-fermentative, facultative anaerobe, which does not contain an endogenous catalase. This could explain the strains susceptibility for hydrogen peroxide.
An overnight culture of Bacillus pumilus (JHS-0047; O72NR7) was grown from a glycerol stock in TSBY media in a 15 mL tube with loose lid at 37 deg C. The next day, the OD600 was measured and the culture diluted with TSBY medium, hydrogen peroxide and/or catalase to a starting OD600 of 0.2 in a total volume of 2 mL TSBY medium. The combinations of hydrogen peroxide and catalase were also tested. Catalase was added in an amount of 0 U/ml, 0.1 U/ml, 0.5 U/ml, 1 U/ml, 5 U/ml, 10 U/ml, 50 U/ml, and 100 U/ml. Cells were left o/n shaking at 150 rpm at 37 deg C. The next day, the OD600 of the cultures was measured in order to assess the effect of hydrogen and/or catalase.
Hydrogen peroxide stops the growth of Bacillus pumilus only at the highest concentration of H2O2 tested. The culture growth is protected already with 1 U/mL catalase from the effects of 38 mM catalase. The higher intrinsic resistance of Bacillus pumilus against the reactive oxygen species hydrogen peroxide probably comes from the fact that this strain is an anaerobe strain and contains an endogeneous catalase.
An overnight culture of Lactobacillus rhamnosus (O431MJ) was grown from a glycerol stock in MRS medium in a 15 mL tube with closed lid at 30 deg C. The next day, the OD600 was measured and the culture diluted with MRS medium, hydrogen peroxide and/or catalase to a starting OD600 of 0.2 in a total volume of 2 mL MRS medium. The combinations of hydrogen peroxide and catalase were also tested. Catalase was added in an amount of 0 U/ml, 0.1 U/ml, 0.5 U/ml, 1 U/ml, 5 U/ml, 10 U/ml, 50 U/ml, and 100 U/ml. Cells were left o/n in the anaerobic box at 37 deg C. The next day, the OD600 of the cultures was measured in order to assess the effect of hydrogen and/or catalase.
Hydrogen peroxide stops the growth of Lactobacillus rhamnosus at around 2 mM H2O2, however the culture is protected even with the lowest catalase concentration of 1 U/ml (at 5 mM H2O2). In the presence of 20 mM hydrogen peroxide, 1 U/mL catalase is not sufficient to protect the culture growth, but 5 U/mL of catalase were shown to be sufficient. Lactobacillus rhamnosus, a facultative anaerobe, does not contain an endogenous catalase. This could explain the strains susceptibility for hydrogen peroxide.
An overnight culture of Pediococcus acidilactici (O14EVW) was grown from a glycerol stock in MRS medium in a 15 mL tube with closed lid at 37 deg C. The next day, the OD600 was measured and the culture diluted with MRS medium, hydrogen peroxide and/or catalase to a starting OD600 of 0.2 in a total volume of 2 mL MRS medium. The combinations of hydrogen peroxide and catalase were also tested. Catalase was added in an amount of 0 U/ml, 0.1 U/ml, 0.5 U/ml, 1 U/ml, 5 U/ml, 10 U/ml, 50 U/ml, and 100 U/ml. Cells were left o/n in the anaerobic box at 37 deg C. The next day, the OD600 of the cultures was measured in order to assess the effect of hydrogen and/or catalase.
Hydrogen peroxide stops the growth of Pediococcus acidilactici at around 2 mM H202, however the culture is protected even with the lowest catalase concentration of 1 U/ml (at 5 mM H202). In contrast to Lactobacillus rhamnosus, 1 U/mL catalase was sufficient to protect strain growth even at the highest hydrogen peroxide concentrations tested. Pediococcus is a facultative anaerobe, not containing the enzyme catalase. This could explain its sensitivity towards hydrogen peroxide.
Three of the strains used above (Lactobacillus rhamnosus, Pediococcus acidilactici, Weissella confusa) were investigated further.
A pre-culture of each strain was grown overnight as described above. This pre-culture was used as inoculum to grow the strain at 37 deg C. for 24 hours under aerobic conditions+/−shaking at 150 rpm, or in the anaerobic box without shaking, using their respective media described above in 24 well plates. The data for these experiments were generated.
The data is represented
(SOD versus CAT activity ratio of 10:1) and Error! Reference source not found. (SOD versus CAT activity ratio of 1:10). In the no-enzyme control, neither CAT nor SOD was used. For each strain, all treatments were compared with each other using Tukey-Kramer HSD in SAS JMP16. In both figures, treatments not connected by the same letter are significantly different.
For all strains tested, the overnight aerobe growth while shaking is improved when adding enzymes. At least the two highest enzyme doses improved growth significantly for all strains. Even without shaking, a significant improvement in overnight aerobe growth could be observed for Weissella confusa and Pediococcus acidilactici. Under anaerobe conditions, generally less effect is seen for the enzymes.
Shaking increases aeration and homogeneity in a culture. Also, when grown anaerobically, no/low reactive oxygen species are formed and thus the oxidoreductases have no ROS to disarm.
For Weissella confusa, aerobe growth without shaking but with a different SOD versus CAT ratio of 1:10 was tested (see Error! Reference source not found.). Already with the lowest enzyme activity (1 U/mL CAT and 0.1 U/mL SOD) the growth was improved significantly, showing that other ratios work as well.
| Number | Date | Country | Kind |
|---|---|---|---|
| 20200651.6 | Oct 2020 | EP | regional |
| Filing Document | Filing Date | Country | Kind |
|---|---|---|---|
| PCT/EP2021/077796 | 10/7/2021 | WO |
