EXTRACORPOREAL CLEARING TRAPS BASED ON INVERSE ELECTRON DEMAND DIELS-ALDER CYCLOADDITION FOR (PRE)-TARGETED THERAPY AND DIAGNOSTICS

Information

  • Patent Application
  • 20230310643
  • Publication Number
    20230310643
  • Date Filed
    August 18, 2021
    3 years ago
  • Date Published
    October 05, 2023
    a year ago
Abstract
The present invention provides extracorporeal removal of targeting vectors applied in pretargeted therapy and diagnostics in animals and humans. The method and the means for extracorporeal removal of the targeting vectors is based on binding agents with inverse electron demand Diels-Alder (IEDDA) cycloaddition reactivity. The targeting vector comprises a therapeutic agent, a diagnostic agent or a theranostic agent and a chemical entity with IEDDA reactivity whereas the extracorporeal means comprises a column with a biocompatible solid support to which a chemical entity with complementary IEDDA reactivity is attached.
Description
FIELD OF THE INVENTION

The present invention relates to extracorporeal removal of targeting vectors applied in pretargeted therapy and diagnostics in animals and humans. The method and the means for extracorporeal removal of the targeting vectors is based on binding agents with inverse electron demand Diels-Alder (IEDDA) cycloaddition reactivity. The targeting vector comprises a therapeutic agent, a diagnostic agent or a theranostic agent and a chemical entity with IEDDA reactivity whereas the extracorporeal means comprises a column with a biocompatible solid support to which a chemical entity with complementary IEDDA reactivity is attached directly or via a linker. Extracorporeal removal of targeting vectors increases the efficiency of the therapy and/or diagnosis by removal of excess circulating targeting vectors whereby the targeting vectors that are bound to the target becomes easier to identify due to less tumor-to-background ratio. Moreover, the off-site toxicity of the targeting vector is reduced.


BACKGROUND OF THE INVENTION

In many areas of medical diagnosis and therapy, it is desired to selectively deliver an agent, such as a therapeutic agent or a diagnostic agent such as an imaging agent, to a specific site, or a confined region, in the body of a subject such as a human patient or a mammal.


Targeting of an organ or a tissue is achieved by the direct or indirect conjugation of the desired active moieties such as contrast-enhancing agents and cytotoxic compounds to a targeting vector, which binds to cell surfaces or promotes cellular uptake at or near the target site of interest. The targeting moieties used to target such agents are typically constructs that have affinity for cell surface targets such as membrane receptors, structural proteins such as amyloid plaques, or intracellular targets such as RNA, DNA, enzymes and cell signaling pathways.


Targeting can also be based on the propensity of the targeting vector to passively accumulate at or near the target site due to alterations in the structure in the target site (e.g. due to the enhanced permeability and retention effect in solid tumors).


Targeting vectors can be antibodies (fragments), proteins, aptamers, synthetic polymers, oligopeptides, oligonucleotides, oligosaccharides, as well as peptides, peptoids and synthetic drug compounds.


An important criterion for successful molecular imaging and/or therapy agents in general and nuclear imaging and/or therapy agents in particular is that they exhibit a high target uptake while showing a rapid clearance through renal and/or hepatobiliary systems from non-target tissue and from the blood. However, this is criterion is often difficult or impossible to meet. Imaging studies in humans have for example shown that whereas the maximum concentration of a radiolabeled antibody at the tumor site is attainable within 24 h several more days are required before the concentration of the labeled antibody in circulation decreases to levels low enough for successful imaging to take place.


Prolonged circulation through non-target tissues of the therapeutic agent such as a radionuclide or drug conjugated to the targeting vector leads to off-site toxicity and decreases the therapeutic index of the agent.


The problem of slow or insufficient accumulation of the therapeutic agent in target tissue and slow clearance from non-target areas can be mitigated by the application of pretargeting approaches.


In pretargeting approaches (as illustrated in FIG. 1), the targeting vector is modified with a tag which enables fast and specific binding to a small-molecular therapeutic or diagnostic agent (subsequently identified as the effector probe). In the first step, unlabeled tagged targeting vector is administered to a subject and given time to accumulate at the disease site usually for 3-7 days. In the second step, the effector probe is administered to the subject. The effector probe binds to the targeting vector upon encountering it, and thus accumulates at the target site. Unbound effector probe is excreted from the body, minimizing the exposure of healthy tissues to effector probe's action which can be radiation, cytotoxicity, reactive oxygen species generation etc.


Mechanisms of selective vector-probe interaction applied in pretargeting include antibody-hapten, or biotin-(strept)avidin binding, or covalent click ligation based on the inverse electron demand Diels-Alder (IEDDA) cycloaddition of dienes and dienophiles, among others. These first two mechanisms have been evaluated in clinical trials, but have not entered routine clinical practice, due to immunogenicity issues towards avidin and lack of modularity with bispecific antibodies.


IEDDA cycloaddition is the most promising pretargeting strategy, which is based on a chemical reaction with—extremely fast kinetics (bimolecular reaction rate up to ˜108 M−1s−1). Furthermore, the reaction is selective in vivo (“bioorthogonal”), while relevant reactive moieties can be easily attached to a wide range of substrates.


A general description of IEDDA-reactive dienes (e.g. tetrazines) and dienophiles (e.g. trans-cyclooctenes) are disclosed in U.S. Pat. No. 9,913,921 B2. The substitution pattern of tetrazines is known to influence the kinetics of their reaction with trans-cyclooctenes. In particular, tetrazines substituted with electron-donating groups, such as methyl-substituted tetrazines, react with trans-cyclooctenes at >10-fold slower rate than unsubstituted tetrazines or tetrazines substituted with electron-withdrawing groups, such as (bis)pyridyl (Oliveira, B. L.; Guo, Z.; Bernardes, G. J. L. Inverse Electron Demand Diels-Alder Reactions in Chemical Biology. Chem. Soc. Rev. 2017, 46 (16), 4895-4950; Stéen, E. J. L.; Jørgensen, J. T.; Denk, C.; Battisti, U. M.; Nørregaard, K.; Edem, P. E.; Bratteby, K.; Shalgunov, V.; Wilkovitsch, M.; Svatunek, D.; et al. Lipophilicity and Click Reactivity Determine the Performance of Bioorthogonal Tetrazine Tools in Pretargeted In Vivo Chemistry. ACS Pharmacol. Trans!. Sci. 2021, 4 (2), 824-833.).


Even with pretargeting approaches, the presence of circulating targeting vector in the blood is a factor that limits the delivery of the effector probe to the target disease site and contributes to off-target toxicity (as shown in FIG. 2A). This is the case for all state-of-the-art pretargeting strategies.


Approaches exist to remove circulating targeting vector from the bloodstream. One approach is to use “clearing agents” which are injectable compounds whose biodistribution is restricted to the blood pool. Clearing agents are capable of binding to the targeting vectors in the same fashion as effector probes do, and contain moieties recognized by the liver or by the immune system. By attaching themselves to the circulating targeting vectors, clearing agents accelerate the removal of the latter from the bloodstream. Such agents have been applied to monoclonal antibody (mAb) based targeting vectors with variable success. However, clinical translation of clearing agents is challenging due to high doses necessary to achieve efficient clearing and unclear properties of the resulting targeting vector conjugate.


Another approach is extracorporeal clearing as illustrated in FIG. 2B. In this approach, the blood of the subject whereto the targeting vector has been administered is passed through a solid resin support, decorated with moieties that recognize and bind the targeting vector molecules in the same fashion as effector probes do. After passing through the solid support, the blood, from which the present targeting vector has been removed, is returned into the patient. Extracorporeal clearing based on biotin-avidin interaction has been employed to improve tumor-vs-healthy tissue contrast (sometimes referred to as tumor-to-background ratio (TBR)) in conventional and pretargeted radio immunotherapy. Toxicological concerns related to extracorporeal clearing are significantly reduced compared to the use of injectable clearing agents since no clearing compounds have to be injected into the body.


Extracorporeal clearing approach developed for a certain pretargeting pair (biotin-streptavidin, antibody-hapten etc.) is not directly translatable to a different pair, because the interactions in each pair are highly selective. To date, no extracorporeal clearing approach based on IEDDA chemistry has been demonstrated.


Extracorporeal clearing based on IEDDA chemistry will possess the same advantages over other interactions used for extracorporeal clearing as are intrinsic to IEDDA reaction, namely: more efficient trapping due to fast kinetics and high resin loadings possible for small IEDDA-reactive compounds, lack of cross-reactivity with endogenous molecules and easy modification of vectors that need to be cleared.


SUMMARY OF THE INVENTION

The present invention provides an extracorporeal clearing trap column comprising a biocompatible solid support to which a chemical entity is attached, characterized in that the chemical entity possesses inverse electron demand Diels-Alder cycloaddition reactivity. The extracorporeal clearing trap is suitable for removing from a bloodstream targeting vectors comprising a therapeutic or diagnostic agent and a chemical entity with IEDDA reactivity complementary to the chemical entity possessing IEDDA reactivity in the clearing trap.


The present invention also provides a chemical entity with inverse electron demand Diels-Alder cycloaddition reactivity attached to an extracorporeal clearing trap column for use in the extracorporeal treatment of a disease wherein a targeting vector, comprising a therapeutic or diagnostic agent or a part of such agent and a complementary to the chemical entity in the clearing trap, has been administered to a subject.


The present invention further provides a method for implementation of the extracorporeal clearing approach based on inverse electron demand Diels-Alder (IEDDA) cycloaddition chemistry and a clearing trap column comprising a biocompatible solid support to which chemical moieties capable of IEDDA cycloaddition complementary to the IEDDA reactivity of the targeting vector to be trapped are attached. These chemical moieties possessing the IEDDA reactivity applied in the column are dienes or dienophiles.


The method according to the invention removes circulating targeting vectors comprising a therapeutic agent, a diagnostic agent, a synthetic agent, or part of such an agent and being tagged with IEDDA-reactive moieties from the bloodstream of a human patient or other mammals by passing the blood through a solid support bearing complementary IEDDA-reactive moieties and afterward, returning the blood back into the subject.


The present invention moreover relates to use of a clearing trap for removing from a bloodstream targeting vectors comprising a therapeutic or diagnostic agent and a chemical entity with IEDDA reactivity complementary to the chemical entity possessing IEDDA reactivity in the clearing trap. The method according to the invention increases the efficiency of pretargeting approaches based on IEDDA cycloaddition by ensuring selective delivery of the effector probe to the target site through the removal of circulating targeting vectors from the bloodstream by means of the clearing trap column according to the invention.





BRIEF DESCRIPTION OF THE DRAWINGS


FIG. 1: The pretargeting principle.



FIG. 2: The extracorporeal clearing principle. The body of the subject is represented by the disease site (tumor), the heart, and blood circulating between them. 2A shows the pretargeting approach without clearing; 2B shows the pretargeting approach when extracorporeal clearing is applied.



FIG. 3: Chemical structures of six amino-tetrazine derivatives tested as trapping agents.



FIG. 4: Amino-tetrazine derivative 7 and its 111In-labeled form [111In]8.



FIG. 5: Example of HPLC radio-chromatogram of [111In]8.



FIG. 6: Structure of a TCO-decorated monoclonal antibody and a TCO-decorated polymer used for determining the trapping efficiency of the agarose resin modified with the amino-tetrazine derivatives.



FIG. 7: Examples of HPLC chromatograms of amino-tetrazines 1-6 (FIGS. 7A to 7F, respectively).



FIG. 8: Examples of SDS-PAGE gel autoradiograms obtained from the titration of TCO-CC49 and TCO-KS254 with [111In]8.



FIG. 9: Diagrams of trapping efficiencies for the agarose resin modified with the amino-tetrazine derivatives. A—trapping efficiencies for TCO-CC49, B—trapping efficiencies for TCO-KS254. Bars show mean values from 2 independent experiments, error bars show standard deviations.



FIG. 10: Scheme of the extracorporeal trapping circuit used for in vivo experiments.



FIG. 11: Example of HPLC radio-chromatogram of [111In]TCO-CC49.



FIG. 12: Radioactivity uptake in the blood and organs of rats injected with [111In]TCO-CC49 and subjected to extracorporeal clearing procedure using tetrazine-decorated and tetrazine-free (sham) agarose columns.





DETAILED DESCRIPTION OF THE INVENTION

In a first aspect, the present invention provides a method for extracorporeal removal of a targeting vector, comprising a therapeutic or diagnostic agent or a part of such agent, and to which the first chemical entity with IEDDA reactivity is attached; comprising:

    • a) Administering the targeting vector to an animal,
    • b) Passing the bloodstream of the animal through a clearing trap column comprising a biocompatible solid support to which a second chemical entity possessing IEDDA reactivity complementary to the first chemical entity of the targeting vector is attached
    • c) Returning the bloodstream to the animal.


The method is suitable for any animal but is particularly relevant in the treatment of mammals, preferably humans. The term “patient” refers in the context of the present invention to an animal, particular to a human, subject to treatment, diagnostics or theranostics wherein a pretargeting approach is applied. Theranostic agents are agents suitable for use both as a diagnostic agent and as a therapeutic agent.


The general principle of extracorporeal clearing is shown in FIG. 2B. In context of the method provided in the first aspect of this invention, a targeting vector comprising a therapeutic or diagnostic agent or a part of such agent, and a first chemical entity with IEDDA reactivity is administered to a patient. The targeting vector must be allowed sufficient time for the targeting vector to reach the target. The sufficient time period will depend on the vector and on the target and will be estimated in early clinical trials of the specific vector. After allowing sufficient time for the vector to reach the target, the blood stream of the patient is passed through the clearing trap column. The clearing trap column comprises a biocompatible support to which a second chemical entity with IEDDA reactivity complementary to the first chemical entity of the targeting vector is attached. When the bloodstream is passed through the column, the second chemical entity of the clearing trap will recognize and bind to the first chemical entity of the targeting vector thereby trapping the targeting vector in the clearing trap column. After passing through the solid support, the blood, from which the targeting vector has been removed, is returned into the patient. Subsequent administration of the effector probe will thus be improved because binding of the effector probe will be restricted to the target vectors that have reached the target.


Any therapeutic agent suitable for pretargeting therapeutic approaches could be used in the present method. As this approach is developing rapidly, it is expected that more and more therapeutic agents will be tested and found to be suitable for pretargeting therapeutic approaches. Presently, the approach is mainly applied within cancer diagnosis, surgery and therapy.


The extracorporeal clearing method according to the invention is based in binding agents possessing IEDDA reactivity. In order for the method to work, the IEDDA reactivity of the targeting vector and of the clearing trap must be complementary. Pairs of chemical entities with complementary IEDDA reactivity such as dienes and dienophiles are well known in the art and includes trans-cyclooctenes (TCO) and s-tetrazines.


In one embodiment, the chemical entity of the targeting vector is a dienophile and the chemical entity of the column is a diene.


In another embodiment, the chemical entity of the targeting vector is a diene and the chemical entity of the clearing trap column is a dienophile.


In preferred embodiments, the diene is a 1,2,4,5-tetrazine derivative and the dienophile is a trans-cyclooctene derivative.

    • Particularly preferred embodiments are embodiments wherein the diene derivative as either the first chemical entity of the target vector or as the second chemical entity of the clearing trap column is selected from the group comprising:




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    • wherein:

    • A and B are independently N or CH

    • R1 is H or a C1-C10 alkyl or is selected from the group consisting of:







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    • wherein X, Y and Z are independently N or CH;

    • R3 is a C1-C10 alkyl, fluorine, bromine, iodine, carboxylic acid, —CO—NH2, —NH—CO—H, —NH—CO—CH3, or —O— R4, wherein R4 is H, or a C1-C10 alkyl or —[—CH2—CH2—O—]n—CH3 wherein n is an integer selected from the group consisting of 1, 2, 3, 4, 5, 6, 7, 8, 9 and 10;

    • R2 is a C1-C10 alkyl, —[—CH2—CH2—O—]m—, wherein in m is an integer selected from the group consisting of 1, 2, 3, 4, 5, 6, 7, 8, 9 and 10, or is selected from the group consisting of:







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    • wherein X, Y and Z are independently N or CH;

    • R3 is a C1-C10 alkyl, fluorine, bromine, iodine, carboxylic acid, —CO—NH2, —NH—CO—H, —NH—CO—CH3, or —O— R4, wherein R4 is H, or a C1-C10 alkyl or —[—CH2—CH2—O—]n—CH3, wherein n is an integer selected from the group consisting of 1, 2, 3, 4, 5, 6, 7, 8, 9 and 10;

    • and wherein the complementary trans-cyclooctene derivative is selected from the group comprising:







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    • wherein W is —CH2—CH(—O—)—, —CH2—CH(—NH—)—, —C(═O)—N(-)-, —N(-)—C(═O)—, a fused 3-membered ring selected from the group consisting of:







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    • wherein V is N or CH,

    • a fused 4-membered ring selected from the group consisting of:







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    • wherein T is O, NH, CH2 or C═O and

    • U is —CH— or —N—,

    • or a fused 5-membered ring selected from the group consisting of:







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    • Wherein Q is O, S or NH.





In another preferred embodiment, the diene derivative as either the first chemical entity of the target vector or as the second chemical entity of the clearing trap column is an 1,2,4,5-tetrazine derivative selected from the group comprising:




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    • and wherein the dienophile is a trans-cyclooctene derivative selected from the group comprising:







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The therapeutic, diagnostic or theranostic probe may be any suitable probe providing a therapeutic effect, a visual effect or both.


In one embodiment, the therapeutic, diagnostic agent or theranostic agent is an optical probe such as fluorescein, indocyanine green, fluorescein isothiocyanate, carboxyfluorescein, rhodamine derivatives, coumarin derivatives cyanine derivatives, Cy5.5, Alexa 680, Cy5, DiD (1,1′-dioctadecyl-3,3,3′,-3-tetramethylindodicarbocyanine perchlorate), and DiR (1,1′-dioctadecyl-3,3,3′,-3′-tetramethylindotricarbocyanine iodide).


In another embodiment, the therapeutic, diagnostic agent or theranostic agent is a fluorescent protein such as green fluorescent protein (GFP), Yellow fluorescent protein (YFP), Red fluorescent protein (RFP).


In yet another embodiment, therapeutic, diagnostic agent or theranostic agent is a radioisotope such as 3H, 11C, 13N, 18F, 19F, 60Co, 64Cu, 68Ga, 82Rb, 90Sr, 90Y, 99Tc, 99mTc, 111In, 123I, 124, 125I, 129I, 131I, 137Cs, 177Lu, 186Re, 188Re, 211At, 225 Ac, Rn, Ra, Th, U, Pu and 241Am.


In yet another embodiment, therapeutic, diagnostic agent or theranostic agent is an antibody such as vancomycin, paclitaxel, doxorubicin, etoposide, irinotecan, SN-38, cyclosporin A, podophyllotoxin, carmustine, amphotericin, ixabepilone, patupilone, rapamycin; a platinum drug or other drugs such as doxycylin, MMP inhibitors, daptomycin L-dopa, oseltamivir, cephalexin, 5-aminolevulinic acid, cysteine, nystatin, amphotericin B, flucytosine, emtricibatine, trimethoprim and sulfamecetriazone.


The targeting vector comprising the therapeutic, diagnostic agent or theranostic agent and a chemical entity possessing IEDDA reactivity can be any vector known in the art suitable for pretargeting approaches. Such targeting vectors includes small molecules, antibodies, aptamers, nanoparticles and polymers.


In preferred embodiments, the targeting vector is a monoclonal antibody or a polypeptoid polymer.


In a second aspect, the present invention provides an extracorporeal clearing trap column that is applicable for use in the method provided in the first aspect.


In a third aspect, the present invention provides a chemical entity with inverse electron demand Diels-Alder cycloaddition reactivity attached to an extracorporeal clearing trap column for use in the extracorporeal treatment of a disease wherein a targeting vector, comprising a therapeutic or diagnostic agent or a part of such agent and a complementary to the chemical entity in the clearing trap, has been administered to a subject.


The chemical entity possessing IEDDA reactivity is attached to a biocompatible solid support of the extracorporeal clearing trap column.


The extracorporeal clearing trap column thus comprises a biocompatible solid support to which a chemical entity possessing IEDDA reactivity is attached. The chemical entity possessing IEDDA reactivity may be attached directly to the biocompatible solid support or by a linker.


In one embodiment, a clearing trap column is provided that comprises a biocompatible solid support to which a chemical entity possessing IEDDA reactivity is attached, for use in the extracorporeal treatment of a disease wherein a targeting vector comprising a therapeutic or diagnostic agent and a chemical entity with IEDDA reactivity complementary to the chemical entity in the clearing trap, has been administered to a patient.


In another embodiment, an extracorporeal clearing trap column is provided that comprises a biocompatible solid support to which a chemical entity possessing IEDDA reactivity is attached, for use in the extracorporeal treatment of a disease wherein a targeting vector comprising a therapeutic or diagnostic agent or a part of such agent and a chemical entity with IEDDA reactivity complementary to the chemical entity in the clearing trap, has been administered to a patient.


The chemical entity with IEDDA reactivity must be complementary to the IEDDA reactivity of the targeting vector. Complementary pairs of chemical entities with IEDDA reactivity is well known in the art, and the skilled person will be able to select complementary pairs.


In one embodiment, the chemical entity of the targeting vector is a diene and the chemical entity in the clearing trap column is a dienophile.


In another embodiment, the chemical entity of the targeting vector is a diene and the chemical entity in the column is a dienophile.


In preferred embodiments, the diene is an 1,2,4,5-tetrazine derivative and the dienophile is a trans-cyclooctene derivative.


Particularly preferred embodiments are embodiments wherein the diene as either the first chemical entity of the target vector or the second chemical entity of the clearing trap column is selected from the group comprising:




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    • wherein:

    • A and B are independently N or CH

    • R1 H or C1-C10 alkyl or is selected from the group consisting of:







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    • wherein X, Y, Z are independently N or CH,

    • R3 is C1-C10 alkyl, fluorine, bromine, iodine, carboxylic acid, —CO—NH2, —NH—CO—H, —NH—CO—CH3, —O—R4, wherein R4 is H, or C1-C10 alkyl or —[—CH2—CH2—O—]n—CH3 wherein n is an integer selected from the group consisting of 1, 2, 3, 4, 5, 6, 7, 8, 9 and 10;

    • R2 is C1-C10 alkyl, —[—CH2—CH2—O—]m—, wherein in m is an integer selected from the group consisting of 1, 2, 3, 4, 5, 6, 7, 8, 9 and 10, or is selected from the group consisting of:







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    • wherein X, Y, Z are independently N or CH,

    • R3 is C1-C10 alkyl, fluorine, bromine, iodine, carboxylic acid, —CO—NH2, —NH—CO—H, —NH—CO—CH3, —O—R4, wherein R4 is H, or C1-C10 alkyl or —[—CH2—CH2—O—]n—CH3 wherein n is an integer selected from the group consisting of 1, 2, 3, 4, 5, 6, 7, 8, 9 and 10;

    • and wherein the dienophile complementary to the diene as either the first chemical entity of the target vector or the second chemical entity of the clearing trap is a trans-cyclooctene derivative selected from the group comprising:







embedded image




    • wherein W is —CH2—CH(—O—)—, or —CH2—CH(—NH—)—, or —C(═O)—N(-)-, —N(-)-, C(═O)—, a fused 3-membered ring selected from the group consisting of:







embedded image




    • wherein V is N or CH,

    • a fused 4-membered ring selected from the group consisting of:







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    • wherein T is O, NH, CH2 or C═O and

    • U is —CH—or —N—,

    • or a fused 5-membered ring selected from the group consisting of:







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    • Wherein Q is O, S or NH





In another preferred embodiment, the diene as either the first chemical entity of the target vector or the second chemical entity of the clearing trap column is a 1,2,4,5-tetrazine derivative selected from the group comprising:




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    • and wherein the dienophile complementary to the diene as either the first chemical entity of the target vector or the second chemical entity of the clearing trap is a trans-cyclooctene derivative selected from the group comprising:







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In embodiments wherein the chemical entity with inverse electron demand Diels-Alder cycloaddition reactivity attached to an extracorporeal clearing trap column for use in the extracorporeal treatment of a disease wherein a targeting vector, comprising a therapeutic or diagnostic agent or a part of such agent and a complementary to the chemical entity in the clearing trap, has been administered to a subject, the therapeutic, diagnostic or theranostic probe may be any suitable probe providing a therapeutic effect, a visual effect or both.


In one embodiment, the therapeutic, diagnostic agent or theranostic agent is an optical probe such as fluorescein, indocyanine green, fluorescein isothiocyanate, carboxyfluorescein, rhodamine derivatives, coumarin derivatives cyanine derivatives, Cy5.5, Alexa 680, Cy5, DiD (1,1′-dioctadecyl-3,3,3′,-3-tetramethylindodicarbocyanine perchlorate), and DiR (1,1′-dioctadecyl-3,3,3′,-3′-tetramethylindotricarbocyanine iodide).


In another embodiment, the therapeutic, diagnostic agent or theranostic agent is a fluorescent protein such as green fluorescent protein (GFP), Yellow fluorescent protein (YFP), Red fluorescent protein (RFP).


In yet another embodiment, therapeutic, diagnostic agent or theranostic agent is a radioisotope such as 3H, 11C, 13N, 18F, 19F, 60Co, 64Cu, 68Ga, 82Rb, 90Sr, 90Y, 99Tc, 99mTc, 111In, 123I, 124, 125I, 129I, 131I, 137Cs, 177Lu, 186Re, 188Re, 211At, 225 Ac, Rn, Ra, Th, U, Pu and 241Am.


In yet another embodiment, therapeutic, diagnostic agent or theranostic agent is an antibody such as vancomycin, paclitaxel, doxorubicin, etoposide, irinotecan, SN-38, cyclosporin A, podophyllotoxin, carmustine, amphotericin, ixabepilone, patupilone, rapamycin; a platinum drug or other drugs such as doxycylin, MMP inhibitors, daptomycin L-dopa, oseltamivir, cephalexin, 5-aminolevulinic acid, cysteine, nystatin, amphotericin B, flucytosine, emtricibatine, trimethoprim and sulfamecetriazone.


The targeting vector comprising the therapeutic, diagnostic agent or theranostic agent and a chemical entity possessing IEDDA reactivity can be any vector known in the art suitable for pretargeting approaches. Such targeting vectors includes small molecules, antibodies, aptamers, nanoparticles and polymers.


In preferred embodiments, the targeting vector is a monoclonal antibody or a polypeptoid polymer.


In embodiments wherein the extracorporeal clearing trap column comprising a biocompatible solid support to which a chemical entity possessing inverse electron demand Diels-Alder cycloaddition reactivity is attached is used in the extracorporeal treatment of a disease wherein a targeting vector, comprising a therapeutic or diagnostic agent or a part of such agent and a complementary to the chemical entity in the clearing trap, has been administered to a subject, the therapeutic, diagnostic or theranostic probe may be any suitable probe providing a therapeutic effect, a visual effect or both.


In one embodiment, the therapeutic, diagnostic agent or theranostic agent is an optical probe such as fluorescein, indocyanine green, fluorescein isothiocyanate, carboxyfluorescein, rhodamine derivatives, coumarin derivatives cyanine derivatives, Cy5.5, Alexa 680, Cy5, DiD (1,1′-dioctadecyl-3,3,3′,-3-tetramethylindodicarbocyanine perchlorate), and DiR (1,1′-dioctadecyl-3,3,3′,-3′-tetramethylindotricarbocyanine iodide).


In another embodiment, the therapeutic, diagnostic agent or theranostic agent is a fluorescent protein such as green fluorescent protein (GFP), Yellow fluorescent protein (YFP), Red fluorescent protein (RFP).


In yet another embodiment, therapeutic, diagnostic agent or theranostic agent is a radioisotope such as 3H, 11C, 13N, 18F, 19F, 60Co, 64Cu, 68Ga, 82Rb, 90Sr, 90Y, 99Tc, 99mTc, 111In, 123I, 124, 125I, 129I, 131I, 137Cs, 177Lu, 186Re, 188Re, 211At, 225 Ac, Rn, Ra, Th, U, Pu and 241Am.


In yet another embodiment, therapeutic, diagnostic agent or theranostic agent is an antibody such as vancomycin, paclitaxel, doxorubicin, etoposide, irinotecan, SN-38, cyclosporin A, podophyllotoxin, carmustine, amphotericin, ixabepilone, patupilone, rapamycin; a platinum drug or other drugs such as doxycylin, MMP inhibitors, daptomycin L-dopa, oseltamivir, cephalexin, 5-aminolevulinic acid, cysteine, nystatin, amphotericin B, flucytosine, emtricibatine, trimethoprim and sulfamecetriazone.


The targeting vector comprising the therapeutic, diagnostic agent or theranostic agent and a chemical entity possessing IEDDA reactivity can be any vector known in the art suitable for pretargeting approaches. Such targeting vectors includes small molecules, antibodies, aptamers, nanoparticles and polymers.


In preferred embodiments, the targeting vector is a monoclonal antibody or a polypeptoid polymer.


The biocompatible solid support of the clearing trap column can be any suitable biocompatible solid support can be used in the method of the present invention. For example, the biocompatible solid support can be a hydrogel, a cross linked polymer matrix, a metal, a ceramic, or a plastic.


Suitable hydrogels in the present invention include, but are not limited to, polysaccharide hydrogels, agarose, alginate, cellulose, hyaluronic acid, chitosan, chitosin, chitin, hyaluronic acid, chondroitin sulfate, and heparin.


Other Sugar-based biomaterials that are suitable as biocompatible solid support in the clearing trap column of the present invention are known in the art. Examples are those described in Polymer Advanced Technology 2014, 25, 448-460.


Suitable polymers as the biocompatible solid support in the clearing trap column of the present invention include, but are not limited to, polyphosphazenes, polyanhydrides, polyacetals, poly(ortho esters), polyphosphoesters, polycaprolactones, polyurethanes, polylactides, polycarbonates, polyamides, and polyethers, and blends/composites/co-polymers thereof. Representative polyethers include, but are not limited to, Poly(ethylene glycol) (PEG), poly(propylene glycol) (PPG), triblock Pluronic (PEGn PPGIm-PEGn), PEG diacrylate (PEGDA) and PEG dimethacrylate (PEGDMA).


The biocompatible solid support in the clearing trap column of the present invention can also include proteins and other poly(amino acids) such as collagen, gelatin, elastin and elastin-like polypeptides, albumin, fibrin, poly(gamma-glutamic acid), poly(L-lysine), poly(L-glutamic acid), and poly(aspartic acid).


In a preferred embodiment, the biocompatible solid support in the clearing trap column of the present invention support is agarose.


The chemical entity with IEDDA reactivity attached to the solid support in the clearing trap column may be attached directly to the solid support or via a linker.


In one embodiment, the chemical entity with IEDDA reactivity attached to the solid support in the clearing trap column is attached to the solid support via a linker.


Any suitable linker can be used in the present invention to link the binding agent to the biocompatible solid support or to the therapeutic or diagnostic agent.


One group of suitable linkers have about 1 to about 100 linking atoms such as from about 1 to about 50 linking atoms, such as from about 1 to about 10 linking atoms, or such as from about 5 to about 10 linking atom.


The types of bonds that can be used to link the chemical entity with IEDDA reactivity of the clearing trap column to the biocompatible support of the clearing trap column include amides, amines, esters, carbamates, ureas, thioethers, thiocarbamates, thiocarbonate and thioureas. However, the skilled person will know that other types of linkers may be applicable.


In some embodiments, the linker includes one or more ethylene-oxy moieties, amines, esters, amides, ketone, urea, carbamate and carbonate functional groups.


Preferably, the linker includes one or more of an amide bond, a urea bond, an alkane chain, a polypeptide, a polypeptoid polymer, polyethylene glycol, N-(2-hydroxypropyl)methacrylamide, polysarcosine, a thiosuccinimide ring or a triazole ring as structural elements connecting the chemical entity possessing IEDDA reactivity to the biocompatible solid support.


In preferred embodiments, the linker is no more than 3 atoms long and contains a single amide bond.


In a third aspect, the present invention provides use of a clearing trap column such as the column according to the second aspect of the invention for removing from a bloodstream targeting vectors comprising a therapeutic or diagnostic agent or a part of such agent and a chemical entity with IEDDA reactivity complementary to the chemical entity possessing IEDDA reactivity in the clearing trap.


In preferred embodiments, the use of a clearing trap column such as the column according to the second aspect of the invention is a use wherein the targeting vector being cleared from the bloodstream is a small molecule, an antibody, a nanoparticle or a polymer.


Also in preferred embodiments, the use of a clearing trap such as the column according to the second aspect of the invention is a use wherein whole blood is passed directly through the trap without prior removal of blood cells by means of a plasma filter or similar device.


Also in preferred embodiments, the use of a clearing trap such as the column according to the second aspect of the invention is a use wherein the therapeutic or diagnostic agent used together with the targeting vector being cleared from the bloodstream is an optical probe such as fluorescein, indocyanine green, fluorescein isothiocyanate, carboxyfluorescein, rhodamine derivatives, coumarin derivatives cyanine derivatives, Cy5.5, Alexa 680, Cy5, DiD (1,1′-dioctadecyl-3,3,3′,-3-tetramethylindodicarbocyanine perchlorate), and DiR (1,1′-dioctadecyl-3,3,3′,-3′-tetramethylindotricarbocyanine iodide); a fluorescent protein such as green fluorescent protein (GFP), Yellow fluorescent protein (YFP), Red fluorescent protein (RFP); a radioisotope such as 3H, 11C, 13N, 18F, 19F, 60Co, 64Cu, 68Ga, 82Rb, 90Sr, 90Y, 99Tc, 99mTc, 111In, 123I, 124I, 125I, 129I, 131I, 137Cs, 177Lu, 186Re, 188Re, 211At, 225Ac, Rn, Ra, Th, U, Pu and 241Am; an antibody such as CC49, B72.3, IDEC-159, a platinum drug, or other drugs such as vancomycin, paclitaxel, doxorubicin, etoposide, irinotecan, SN-38, cyclosporin A, podophyllotoxin, carmustine, ixabepilone, patupilone, rapamycin, doxycylin, MMP inhibitors, daptomycin L-dopa, oseltamivir, cephalexin, 5-aminolevulinic acid, cysteine, nystatin, amphotericin B, flucytosine, emtricibatine, trimethoprim and sulfamecetriazone.


SOURCES
Reviews of Pretargeting Methods





    • Altai M, Membreno R, Cook B, Tolmachev V, Zeglis B M. Pretargeted Imaging and Therapy. J Nucl Med 2017; 58:1553-9. doi:10.2967/jnumed.117.189944.

    • Stéen E J L, Edem P E, Nørregaard K, Jørgensen J T, Shalgunov V, Kjaer A, et al. Pretargeting in nuclear imaging and radionuclide therapy: Improving efficacy of theranostics and nanomedicines. Biomaterials 2018; 179:209-45. doi:10.1016/j.biomaterials.2018.06.021.





EXAMPLES
Example 1: Amino-Tetrazines

Six amino-tetrazines with IEDDA activity were tested for their efficiency as trapping agents for TCO-derivatives with complementary IEDDA activity. The six amino-tetrazines were used for incorporation into agarose hydrogel as described in Example 5.


The formulas of the six amino-tetrazines are shown in FIG. 3.


Tetrazine No. 1 and 2 (as shown in FIG. 3) were purchased from Jena Bioscience and used without further purification and characterization.


General methods used to prepare and characterize tetrazines 3-7:


All reagents and solvents were purchased from ABX, Sigma Aldrich, Fluorochem and VWR and used as received, without further purification, unless stated otherwise. Dry THF and DCM were obtained from a SG Water solvent purification system and dry dimethyl sulfoxide (DMSO), MeCN, pyridine and methanol (MeOH) were purchased from commercial suppliers. Room temperature corresponds to a temperature interval from 18-21° C. Reactions requiring anhydrous conditions were carried out under inert atmosphere (nitrogen) and using oven-dried glassware (152° C.).


NMR (1H, 13C) spectra were acquired on a 600 MHz Bruker Avance III HD, a 400 MHz Bruker Avance II or a Bruker AC200. Samples were measured at 300 K, except for the Bruker AC200, in which samples were measured at 293 K. Chemical shift (δ) are expressed in parts per million and referenced to residual solvent peak. The resonance multiplicity is abbreviated as follows or combinations thereof: s (singlet), bs (broad singlet), d (doublet), t (triplet), p (quintet) and m (multiplet). All 13C NMR spectra were measured with proton decoupling. Thin-layer chromatography (TLC) was run on silica plated aluminum sheets (Silica gel 60 F254) from Merck and the spots were visualized by ultraviolet light at 254 nm, by anisaldehyde and/or by potassium permanganate staining. Flash column chromatography was carried out manually on silica gel 60 (0.040-0.063 mm). Preparative high-performance liquid chromatography (HPLC) was performed on a Thermo Scientific Dionex 3000 UltiMate instrument connected to a Thermo Scientific Dionex 3000 Diode Array Detector using a Gemini-NX 5 μ RP C18 column (250×21.2 mm) with UV detection at 254 and 280 nm. Mobile phase A (MP A): 0.1% trifluoroacetic acid (TFA) in water (v/v). Mobile phase B (MP B): 0.1% TFA, 10% water in ACN (v/v/v). Flow rate: 20 mL/min. Gradient: 0-30 min, 0→100% MP B; 30-35 min, 100% MP B.


Tetrazine 3 (as shown in FIG. 3) was prepared as follows:


tert-Butyl (4-cyanobenzyl)carbamate



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4-(Aminomethyl)benzonitrile hydrochloride (2.00 g, 11.86 mmol, 1 eq.) was dissolved in 200 mL DCM under N2 atmosphere. After the addition of Boc2O (2.588 g, 11.86 mmol, 1 eq.) and Et3N (5.12 ml, 36.76 mmol, 3.1 eq.) the reaction mixture was left to stir at r.t overnight before being concentrated under reduced pressure. The crude was dissolved in EtOAc and washed with sat. NaHCO3 and dried over MgSO4 to afford a white solid (2.22 g, 9.55 mmol, 81%). 1H NMR (600 MHz, MeOD) δ 7.68 (d, J=8.0 Hz, 2H), 7.45 (d, J=8.0 Hz, 2H), 4.30 (s, 2H), 1.45 (s, 9H). 13C NMR (151 MHz, MeOD) δ 158.5, 147.0, 133.3, 128.9, 119.7, 111.7, 80.4, 44.6, 28.7.


tert-Butyl (4-(1,2,4,5-Tetrazin-3-yl)benzyl)carbamate



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tert-Butyl (4-cyanobenzyl)carbamate (3 g, 12.91 mmol, 1 eq.), DCM (2.07 mL 32.28 mmol, 2.5 eq.), sulfur (826.27 mg, 3.22 mmol, 0.25 eq.) and ethanol (20 mL) were mixed together in a 30 mL closed vial. Hydrazine monohydrate (5.86 mL, 103.32 mmol, 8 eq.) was added dropwise while stirring. The vessel was sealed and the reaction mixture was heated to 50° C. for 24 hours. The reaction mixture was cooled to 0° C., to which DCM (30 mL), sodium nitrite (8.91 g, 129.1 mmol, 10 eq.) and H2O (100 mL) were added. Excess acetic acid (44.3 mL, 775 mmol, 60 eq.) was added afterwards slowly during which the solution turned bright red in color (pH=3). The reaction mixture was extracted with DCM (150 mL). The organic phase was dried over MgSO4, filtered and concentrated under reduced pressure. The resulting residue was purified using silica gel chromatography (15:85 EtOAc:Heptane) and then fractions containing the desired compound were combined and concentrated (85-90% pure). Crystalized from heptane/ethyl acetate 2:1 at rt. A pink solid, was obtained with sufficient purity (>97%). (550 mg, 1.91 mmol, 14%); 1H NMR (600 MHz, MeOD) δ 10.34 (s, 1H), 8.57 (d, J=8.1 Hz, 2H), 7.57 (d, J=8.1 Hz, 2H), 4.39 (s, 2H), 1.51 (s, 9H); 13C NMR (151 MHz, MeOD) δ 167.6, 159.2, 158.6, 146.5, 132.1, 129.2, 128.9, 80.3, 44.7, 28.7.


(4-(1,2,4,5-Tetrazin-3-yl)phenyl)methanaminium trifluoroacetate (Tetrazine 3)



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tert-Butyl (4-(1,2,4,5-Tetrazin-3-yl)benzyl)carbamate (338 mg, 1.17 mmol, 1 eq.) was dissolved in 50 mL DCM. Afterwards 20 mL of TFA were added and the reaction was left to stir for 30 minutes at r.t. The solvent was removed under reduced pressure resulting to a pink solid (Tetrazine 3) (350 mg, 1.16 mmol, 99%) which was used at the next step without further purification. 1H NMR (600 MHz, MeOD) δ 10.39 (s, 1H), 8.69 (d, J=8.4 Hz, 2H), 7.76 (d, J=8.4 Hz, 2H), 4.30 (s, 2H); 13C NMR (151 MHz, MeOD) δ 167.3, 162.85 (q), 159.5, 139.2, 134.2, 130.8, 129.7, 118.14 (q), 43.9.


Tetrazine 4 (as shown in FIG. 3) was prepared as follows:


5-((4-(1,2,4,5-Tetrazin-3-yl)benzyl)amino)-5-oxopentanoic Acid



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(4-(1,2,4,5-Tetrazin-3-yl)phenyl)methanaminium trifluoroacetate (tetrazine 3, 210 mg, 0.69 mmol, 1 eq.) and glutaric anhydride (79.5 mg, 0.69 mmol, 1 eq., purified directly before use) were dissolved in a 100 mL flask then diluted with 20 mL DCM. After that, Et3N (194 μL, 1.39 mmol, 2 eq.) was added, and the reaction was stirred at r.t for 1.5 h. Volatiles were removed under vacuum and the concentrated reddish solid was washed with a solution 3:1 heptane:EtOAc. The crude was purified by flash chromatography (DCM:MeOH 9:1 0.2% Acetic acid), which yielded the desired compound as a pink solid (160 mg, 0.53 mmol, 76%). 1H NMR (600 MHz, MeOD) δ 10.34 (s, 1H), 8.58 (d, J=8.4 Hz, 2H), 7.59 (d, J=8.3 Hz, 2H), 4.53 (s, 2H), 2.38 (td, J=7.4, 2.9 Hz, 4H), 1.97 (p, J=7.4 Hz, 2H). 13C NMR (151 MHz, MeOD) δ 176.8, 175.4, 167.6, 159.2, 145.6, 132.3, 129.3, 129.3, 43.7, 36.0, 34.1, 22.3.


tert-Butyl (37,41-dioxo-41-((4-(1,2,4,5-tetrazin-3-yl)benzyl)amino)-3,6,9,12,15,18,21,24,27,30,33-undecaoxa-36-azahentetracontyl)carbamate



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Et3N (70 μL, 0.50 mmol, 1.5 eq.) was added to a stirred mixture of 5-((4-(1,2,4,5-Tetrazin-3-yl)benzyl)amino)-5-oxopentanoic acid (100 mg, 0.33 mmol, 1 eq.), O-(2-aminoethyl)-O′-[2-(Boc-amino)ethyl]decaethylene glycol (214 mg, 0.33 mmol, 1 eq.) and HATU (158 mg, 0.42 mmol, 1.25 eq.) in dry DMF (5 mL). After stirring for 2 hours at room temperature, the mixture was diluted in water (10 mL) and extracted afterwards with DCM (3×20 mL). The organic layers were combined was dried over MgSO4, filtered and concentrated under reduced pressure. The resulting residue was purified by column chromatography on silica using MeOH/DCM mixture (6/94 v/v) as eluent, giving the desired product as a red solid (265 mg, 0.29 mmol, 86%); 1H NMR (400 MHz, MeOD) δ 10.33 (s, 1H), 8.60-8.51 (m, 2H), 7.63-7.51 (m, 2H), 4.50 (s, 2H), 3.78-3.57 (m, 40H), 3.54 (t, J=5.5 Hz, 2H), 3.50 (t, J=5.6 Hz, 2H), 3.36 (t, J=5.5 Hz, 2H), 3.25-3.17 (m, 2H), 2.33 (t, J=7.5 Hz, 2H), 2.27 (t, J=7.4 Hz, 2H), 2.00-1.91 (m, 2H), 1.44 (s, 9H).


37,41-dioxo-41-((4-(1,2,4,5-Tetrazin-3-l)benzyl)amino)-3,6,9,12,15,18,21,24,27,30,33-undecaoxa-36-azahentetracontan-1-aminium trifluoroacetate (tetrazine 4)



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tert-Butyl (37,41-dioxo-41-((4-(1,2,4,5-tetrazin-3-yl)benzyl)amino)-3,6,9,12,15,18,21,24,27,30,33-undecaoxa-36-azahentetracontyl)carbamate (135 mg, 0.146 mmol) was mixed with 10 mL TFA and 35 mL dry DCM. After stirring for 30 min at room temperature, all volatiles were removed in vacuo, and the crude was dried on high vacuum, which yielded a dark red solid (137 mg, 0.136 mmol, 93%). 1H NMR (400 MHz, MeOD) δ 10.33 (s, 1H), 8.56 (d, J=8.3 Hz, 2H), 7.57 (d, J=8.2 Hz, 2H), 4.50 (s, 2H), 3.80-3.75 (m, 2H), 3.74-3.58 (m, 40H), 3.54 (t, J=5.5 Hz, 2H), 3.36 (t, J=5.6 Hz, 2H), 3.18 (t, J=5.1 Hz, 2H), 2.33 (t, J=7.5 Hz, 2H), 2.27 (t, J=7.5 Hz, 2H), 1.95 (p, J=7.4 Hz, 2H).


Tetrazine 5 (as shown in FIG. 3) was prepared as follows:


tert-butyl (8-((6-cyanopyridin-3-yl)amino)-8-oxooctyl)carbamate



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5-amino-2-cyanopyridine (1.0 g, 9.38 mmol, 1.0 eq.) and 8-((tert-butoxycarbonyl)amino)octanoic acid (2.39 g, 9.23, 1.1 eq.) were dissolved in dry DMF (15 mL), followed by the addition of Et3N (2.34 mL, 16.79 mmol, 2.0 eq.). HATU (3.83 g, 10.07 mmol, 1.2 eq.) was added in one portion and the reaction was allowed to stir for 17 hours at room temperature. The reaction was quenched with sat. Na2CO3 and the crude was extracted with 3× DCM. The product was purified by column chromatography, yielding the desired product (2.06 g, 5.72 mmol, 61%); 1H NMR (400 MHz, CDCl3) δ 8.96 (s, 1H), 8.72 (d, J=2.5 Hz, 1H), 8.44 (dd, J=8.6, 2.6 Hz, 1H), 7.64 (d, J=8.5 Hz, 1H), 4.65 (s, 1H), 3.08 (q, J=6.5 Hz, 2H), 2.42 (t, J=7.5 Hz, 2H), 1.72 (q, J=7.2 Hz, 2H), 1.43 (s, 9H), 1.38-1.21 (m, 8H); 13C NMR (101 MHz, CDCl3) δ 173.0, 156.5, 142.1, 138.3, 129.2, 127.4, 126.2, 117.6, 79.5, 40.4, 37.3, 33.2, 29.9, 28.6, 26.3, 25.0.


tert-butyl (8-oxo-8-((6-(6-(pyridin-2-yl)-1,4-dihydro-1,2,4,5-tetrazin-3-yl)pyridin-3-yl)amino)octyl)carbamate



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tert-butyl (8-((6-cyanopyridin-3-yl)amino)-8-oxooctyl)carbamate (500 mg, 1.39 mmol, 1.0 eq.) and 2-cyanopyridine (578 mg, 5.55 mmol, 4.0 eq.) were dissolved in EtOH (abs) (1.5 mL), followed by the addition of hydrazine hydrate (1.35 mL). The reaction was heated to 90° C. in a closed μW-vial, under N2-atmosphere and stirred for overnight. The reaction was concentrated, suspended in H2O and the crude was extracted with 3× DCM. The combined fractions were purified by column chromatography, yielding the desired product as a yellow solid (362 mg, 0.74 mmol, 53%); 1H NMR (400 MHz, CDCl3) δ 8.63 (d, J=2.5 Hz, 1H), 8.60-8.54 (m, 1H), 8.53 (s, 1H), 8.48 (s, 1H), 8.19 (dd, J=8.7, 2.5 Hz, 1H), 8.08-7.97 (m, 2H), 7.75 (td, J=7.8, 1.7 Hz, 1H), 7.34 (ddd, J=7.5, 4.9, 1.2 Hz, 1H), 4.54 (s, 1H), 3.11 (q, J=6.9 Hz, 2H), 2.40 (t, J=7.4 Hz, 2H), 1.74 (p, J=7.2 Hz, 2H), 1.53-1.45 (m, 1H), 1.44 (s, 9H), 1.40-1.25 (m, 6H), 1.28-1.22 (m, 1H), 1.14 (dt, J=25.7, 7.1 Hz, 1H). 13C NMR (151 MHz, CDCl3) δ 172.4, 156.3, 148.5, 147.7, 146.9, 146.5, 142.7, 139.3, 137.8, 136.4, 127.4, 125.0, 121.7, 121.4, 79.3, 40.2, 33.2, 32.0, 26.8, 26.3, 25.5, 25.2, 22.8.


tert-butyl (8-oxo-8-((6-(6-(pyridin-2-yl)-1,2,4,5-tetrazin-3-yl)pyridin-3-yl)amino)octyl)carbamate



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tert-butyl (8-oxo-8-((6-(6-(pyridin-2-yl)-1,4-dihydro-1,2,4,5-tetrazin-3-yl)pyridin-3-yl)amino)octyl) carbamate (60 mg, 0.12 mmol, 1.0 eq.) was dissolved in dry DCM (6 mL) and cooled to 0° C., followed by the portion wise addition of PIDA (47 mg, 0.15 mmol, 1.2 eq.). The reaction was allowed to warm to room temperature and was stirred for 3 h. Celite was added to the mixture and the mixture was concentrated. The crude was purified by column chromatography, which yielded a red solid (43 mg, 0.09 mmol, 72%). 1H NMR (600 MHz, CDCl3) δ 8.96 (dd, J=4.8, 1.6 Hz, 1H), 8.90 (d, J=2.5 Hz, 1H), 8.74 (t, J=8.9 Hz, 2H), 8.65 (dd, J=8.7, 2.5 Hz, 1H), 8.56 (s, 1H), 8.00 (td, J=7.8, 1.8 Hz, 1H), 7.57 (ddd, J=7.6, 4.7, 1.2 Hz, 1H), 4.58 (s, 1H), 3.12 (q, J=6.8 Hz, 2H), 2.46 (t, J=7.4 Hz, 2H), 1.76 (q, J=7.3 Hz, 2H), 1.50-1.46 (m, 2H), 1.44 (s, 9H), 1.41-1.30 (m, 6H). 13C NMR (151 MHz, CDCl3) δ 172.7, 163.7, 163.5, 156.4, 151.1, 150.3, 144.5, 141.9, 138.3, 137.6, 127.1, 126.6, 125.4, 124.5, 79.4, 40.3, 37.4, 29.9, 28.8, 28.6, 28.5, 26.2, 25.1.


8-amino—N-(6-(6-(pyridin-2-yl)-1,2,4,5-tetrazin-3-yl)pyridin-3-yl)octanamide 2,2,2-trifluoroacetate (Tetrazine 5)



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tert-butyl (8-oxo-8-((6-(6-(pyridin-2-yl)-1,2,4,5-tetrazin-3-yl)pyridin-3-yl)amino)octyl)carbamate (25 mg, 0.05 mmol, 1.0 eq.) was dissolved in dry DCM 2 mL), to which was added dropwise TFA (49 μL, 0.51 mmol, 10.0 eq.). The reaction was stirred for 2 h at room temperature, after which all volatiles were removed in vacuo and the crude was dried on high vacuum, which yielded of a dark red solid (19 mg, 0.048 mmol, 95%) 1H NMR (600 MHz, MeOD) δ 9.10 (d, J=2.5 Hz, 1H), 8.93 (ddd, J=5.0, 1.7, 0.9 Hz, 1H), 8.86 (dt, J=8.0, 1.1 Hz, 1H), 8.80 (d, J=8.7 Hz, 1H), 8.49 (dd, J=8.7, 2.5 Hz, 1H), 8.31 (tt, J=7.8, 1.3 Hz, 1H), 7.85 (ddt, J=7.5, 4.9, 1.1 Hz, 1H), 2.93 (t, J=7.7 Hz, 2H), 2.51 (t, J=7.4 Hz, 2H), 1.76 (p, J=7.5 Hz, 2H), 1.68 (p, J=7.4 Hz, 2H), 1.48-1.41 (m, 6H). 13C NMR (151 MHz, MeOD) δ 175.3, 164.3, 160.6, 160.4, 160.1, 159.8, 150.6, 142.3, 128.9, 126.5, 125.9, 117.7, 115.8, 40.7, 37.8, 30.0, 29.9, 28.5, 27.3, 26.3.


Tetrazine 6 (as shown in FIG. 3) was prepared as follows:


6-(6-(Pyridin-2-yl)-1,4-dihydro-1,2,4,5-tetrazin-3-yl)pyridin-3-amine



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5-amino-2-cyanopyridine (1.140 g, 9.60 mmol, 1 eq.), 2-cyanopyridine (0.995 g, 9.60 mmol, 1 eq.) and hydrazine monohydrate (2.35 mL, 48 mmol, 5 eq.) were added in a sealed vial at room temperature. The vial was heated at 90° C. and the resulting solution was stirred for 14 h at this temperature. After cooling to room temperature, the resulting orange solid was washed with cold water, dried and purified by column chromatography using a gradient elution (EtOAc-heptane, 1:1 to 6:1) to furnish the desired compound (532 mg, 2.10 mmol, 22%) as a pale orange solid; 1H NMR (600 MHz, DMSO) δ 8.71 (s, 1H), 8.65 (s, 1H), 8.64-8.60 (m, 1H), 7.98-7.87 (m, 3H), 7.65 (d, J=8.6 Hz, 1H), 7.51 (ddd, J=7.4, 4.8, 1.3 Hz, 1H), 7.00 (dd, J=8.6, 2.7 Hz, 1H), 5.87 (s, 2H); 13C NMR (151 MHz, DMSO) δ 148.5, 147.5, 146.7, 146.6, 146.6, 137.34, 134.1, 134.1, 125.1, 121.8, 120.8, 120.3.


6-(6-(Pyridin-2-yl)-1,2,4,5-tetrazin-3-yl)pyridin-3-amine



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6-(6-(Pyridin-2-yl)-1,4-dihydro-1,2,4,5-tetrazin-3-yl)pyridin-3-amine (532 mg, 2.09 mmol, 1 eq.) was dissolved in DCM (50 mL) and PIDA (809.8 mg, 2.51 mmol, 1.2 eq.) was added in one portion at room temperature. The resulting solution was stirred at this temperature for 2 h. Volatiles were removed under reduced pressure and the resulting crude material was purified by column chromatography using a gradient elution (DCM-MeOH, 99:1 to 9:1) to afford the desired compound (263 mg, 1.04 mmol, 50%) as a dark red solid; 1H NMR (600 MHz, DMSO) δ 8.91-8.88 (m, 1H), 8.53 (d, J=7.9 Hz, 1H), 8.36 (d, J=8.6 Hz, 1H), 8.24 (d, J=2.7 Hz, 1H), 8.12 (td, J=7.7, 1.8 Hz, 1H), 7.68 (ddd, J=7.6, 4.7, 1.2 Hz, 1H), 7.13 (dd, J=8.6, 2.7 Hz, 1H), 6.36 (s, 2H); 13C NMR (151 MHz, DMSO) δ 162.9, 162.5, 150.4, 147.9, 137.6, 137.3, 136.0, 126.2, 125.7, 123.7, 118.9.


5-oxo-5-((6-(6-(pyridin-2-yl)-1,2,4,5-tetrazin-3-yl)pyridin-3-yl)amino)pentanoic acid



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A solution of 6-(6-(Pyridin-2-yl)-1,2,4,5-tetrazin-3-yl)pyridin-3-amine (275 mg, 1.094 mmol, 1 eq.) and glutaric anhydride (624 mg, 5.46 mmol, 5 eq.) in dry THF (20 mL) was heated at 110° C. for 3 days in a sealed flask. After cooling, volatiles were removed under vacuum and the precipitate was washed with DCM (2×12 mL) and EtOAc (12 mL) to yield the desired compound as a red solid (333 mg, 0.911 mmol, 83%); 1H NMR (600 MHz, DMSO) δ 12.11 (s, 1H), 10.57 (s, 1H), 9.04 (d, J=2.5 Hz, 1H), 8.93 (d, J=4.4 Hz, 1H), 8.61 (d, J=8.7 Hz, 1H), 8.59 (d, J=7.8 Hz, 1H), 8.42 (dd, J=8.7, 2.5 Hz, 1H), 8.15 (td, J=7.7, 1.8 Hz, 1H), 7.72 (ddd, J=7.6, 4.7, 1.2 Hz, 1H), 2.48 (d, J=7.4 Hz, 2H), 2.32 (t, J=7.3 Hz, 2H), 1.86 (p, J=7.4 Hz, 2H); 13C NMR (151 MHz, DMSO) δ 174.1, 172.0, 163.0, 162.7, 150.6, 150.2, 143.8, 141.3, 138.4, 137.8, 126.5, 126.1, 124.9, 124.2, 35.4, 32.9, 20.1.


tert-Butyl (37,41-dioxo-41-((6-(6-(pyridin-2-yl)-1,2,4,5-tetrazin-3-yl)pyridin-3-yl)amino)-3,6,9,12,15,18,21,24,27,30,33-undecaoxa-36-azahentetracontyl)carbamate



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Et3N (71 μL, 0.466 mmol, 1.5 eq.) was added to a stirred mixture of 5-oxo-5-((6-(6-(pyridin-2-yl)-1,2,4,5-tetrazin-3-yl)pyridin-3-yl)amino)pentanoic acid (114 mg, 0.3115 mmol, 1 eq.), O-(2-Aminoethyl)-O′-[2-(Boc-amino)ethyl]decaethylene glycol (249 mg, 0.373 mmol, 1.2 eq.) and HATU (129 mg, 0.389 mmol, 1.25 eq.) in DMF (8 mL). After stirring overnight at rt, the mixture was diluted in water (20 mL) and extracted afterwards with DCM (40 mL) three times. The organic phases were combined was dried over MgSO4, filtered and concentrated under reduced pressure. The resulting residue was purified by column chromatography on silica using a gradient of MeOH in DCM (0-10%) giving the desired compound as a purple/red solid (157 mg, 0.158 mmol, 50%); 1H NMR (600 MHz, CDCl3) δ 9.61 (s, 1H), 9.04 (s, 1H), 8.98 (d, J=6.6 Hz, 1H), 8.74 (d, J=2.3 Hz, 1H), 8.73 (d, J=1.8 Hz, 1H), 8.65 (dd, J=8.6, 2.5 Hz, 1H), 8.01 (td, J=7.8, 1.8 Hz, 1H), 7.58 (ddd, J=7.6, 4.7, 1.2 Hz, 1H), 6.59 (s, 1H), 5.05 (s, 1H), 3.76-3.56 (m, 42H), 3.53 (t, J=5.2 Hz, 2H), 3.47 (q, J=5.2 Hz, 2H), 3.30 (d, J=5.9 Hz, 2H), 2.58 (t, J=6.9 Hz, 2H), 2.38 (t, J=6.8 Hz, 2H), 2.10 (p, J=6.4 Hz, 2H), 1.43 (s, 9H); 13C NMR (151 MHz, CDCl3) δ 173.3, 172.7, 163.6, 163.5, 151.0, 150.4, 144.0, 142.2, 138.7, 137.6, 126.6, 126.5, 125.3, 124.4, 70.6, 70.3, 70.2, 40.5, 39.4, 36.2, 35.1, 28.5, 21.6.


37,41-dioxo-41-((6-(6-(pyridin-2-yl)-1,2,4,5-tetrazin-3-yl)pyridin-3-yl)amino)-3,6,9,12,15,18,21,24,27,30,33-undecaoxa-36-azahentetracontan-1-aminium trifluoroacetate (Tetrazine 6)



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tert-Butyl (37,41-dioxo-41-((6-(6-(pyridin-2-yl)-1,2,4,5-tetrazin-3-yl)pyridin-3-yl)amino)-3,6,9,12,15,18,21,24,27,30,33-undecaoxa-36-azahentetracontyl)carbamate (157 mg, 0.158 mmol, 1 eq.) was dissolved in 25 mL dry DCM together with 10 mL TFA and left to react for 30 min at rt, resulting in complete conversion to Tetrazine 6 (159 mg, 0.158 mmol). 1H NMR (600 MHz, MeOD) δ 9.06 (d, J=2.4 Hz, 1H), 8.88 (d, J=4.0 Hz, 1H), 8.76 (t, J=8.1, 7.3 Hz, 2H), 8.48 (dd, J=8.7, 2.3 Hz, 1H), 8.17 (td, J=7.8, 1.8 Hz, 1H), 7.73 (ddd, J=7.6, 4.8, 1.2 Hz, 1H), 3.79-3.72 (m, 2H), 3.72-3.60 (m, 42H), 3.56 (t, J=5.5 Hz, 2H), 3.39 (t, J=5.5 Hz, 2H), 3.20-3.17 (m, 2H), 2.54 (t, J=7.3 Hz, 2H), 2.34 (t, J=7.4 Hz, 2H), 2.04 (p, J=7.3 Hz, 2H); 13C NMR (151 MHz, MeOD) δ 175.4, 174.3, 164.7, 164.5, 162.9 (q), 151.5, 151.3, 145.3, 142.7, 140.3, 139.5, 128.3, 128.2, 126.1, 125.6, 118.2 (q), 67.9, 40.6, 40.3, 36.8, 36.0, 22.6.


Example 2: Preparation of Radiolabeled Tetrazine

Tetrazine 7 (as shown in FIG. 4) was prepared as described in (Rossin, R.; Verkerk, P. R.; van den Bosch, S. M.; Vulders, R. C. M.; Verel, I.; Lub, J.; Robillard, M. S., In Vivo Chemistry for Pretargeted Tumor Imaging in Live Mice. Angew Chem Int Edit 2010, 49 (19), 3375-3378.)



111In-Labeled tetrazine 8 ([111In]8, as shown in FIG. 4) was prepared by radiolabeling of tetrazine 7. For the radiolabeling, [111In]InCl3 (50-100 μL, 10-20 MBq) was added to a solution of 1 M NH4OAc pH 5.0 (10-20 μL) and DOTA-Tz precursor 19 (4-6 μg, 2-3 μL from stock solution in metal-free water). Depending on the amount of [111In]InCl3 used for the labeling, one fifth of the volume 1 M NH4OAc pH 5.0 was needed. The mixture was heated at 60° C. for 5 min, before 13 mM gentisic acid in saline (2 μL) and 10 mM DTPA in PBS (3 μL) were added. The mixture was heated at 60° C. for 5 additional min. Analysis was performed by radio-HPLC on a Aeris Peptide 3.6 μm XB-C18 column (150×4.6 mm) using a gradient of acetonitrile (CH3CN) in water with 0.1% TFA. Gradient conditions: 0-1 min-5% CH3CN, 1-8 min—linear increase of CH3CN content to 75%, 8-9 min—75% CH3CN, 9-9.5 min—linear decrease of CH3CN content to 5%, 9.5-10 min—5% CH3CN, elution speed 1.5 mL/min. [111In]8 was afforded in a radiochemical yield (RCY) of 94±5% (n=7). Example of HPLC radio-chromatogram of [111In]8 is shown in FIG. 5.


Example 3: Preparation of TCO-Decorated Polymer and TCO-Decorated Monoclonal Antibody TCO-CC49

TCO-decorated monoclonal antibody TCO-CC49 (corresponding to Structure 1 in FIG. 6) was prepared as described in (Rossin, R.; Van Duijnhoven, S. M. J.; Läppchen, T.; Van Den Bosch, S. M.; Robillard, M. S. Trans-Cyclooctene Tag with Improved Properties for Tumor Pretargeting with the Diels-Alder Reaction. Mol. Pharm. 2014, 11 (9), 3090-3096.). In this publication, TCO-CC49 is referred to as CC49-TCO(2).


Namely, CC49 monoclonal antibody was produced from the CC49 hybridoma cell line acquired from the American Type Culture Collection (ATCC) as described in (Rossin, R.; Verkerk, P. R.; van den Bosch, S. M.; Vulders, R. C. M.; Verel, I.; Lub, J.; Robillard, M. S., In Vivo Chemistry for Pretargeted Tumor Imaging in Live Mice. Angew Chem Int Edit 2010, 49 (19), 3375-3378.) and modified with axial (E)-2,5-dioxopyrrolidin-1-yl 2-(cyclooct-4-en-1-yloxy)acetate (structure shown below) as described in the same publication.




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Axial (E)-2,5-dioxopyrrolidin-1-yl 2-(cyclooct-4-en-1-yloxy)acetate was prepared as described in (Rossin, R.; van den Bosch, S. M.; ten Hoeve, W.; Carvelli, M.; Versteegen, R. M.; Lub, J.; Robillard, M. S. Highly Reactive Trans-Cyclooctene Tags with Improved Stability for Diels-Alder Chemistry in Living Systems. Bioconjug. Chem. 2013, 24 (7), 1210-1217.) In this publication, axial (E)-2,5-dioxopyrrolidin-1-yl 2-(cyclooct-4-en-1-yloxy)acetate is referred to as compound 7b.


TCO-decorated polymer TCO-KS254 (corresponding to Structure 2 in FIG. 6) was prepared as described in (Stéen, E. J. L.; Jørgensen, J. T.; Johann, K.; Nørregaard, K.; Sohr, B.; Svatunek, D.; Birke, A.; Shalgunov, V.; Edem, P. E.; Rossin, R.; et al. Trans-Cyclooctene-Functionalized PeptoBrushes with Improved Reaction Kinetics of the Tetrazine Ligation for Pretargeted Nuclear Imaging. ACS Nano 2020, 14 (1), 568-584.) In this publication, TCO-KS254 is referred to as Peptobrush 1.


Example 4: Preparation of Tz-Agarose

Amino-tetrazine (1-6) was dissolved in phosphate-buffered saline (PBS, 120 mM NaCl, 10 mM phosphate buffer pH 7.4) to a concentration of 4 mM (tetrazine 5 could only be dissolved to a concentration of 2.7 mM). This solution was added to dry NHS-activated agarose resin (Pierce/Thermo Fisher Scientific) at the ratio of 1 mL solution per 60 mg resin. The resin was shaken in a plastic tube with a filter frit for 2-3 h at room temperature, then tetrazine solution was removed by vacuum filtration, and the resin was washed 3 times with PBS at the same mL-per-mg resin ratio. After that, Tris-HCl buffer (0.5M, pH 7.4) was added to the resin, the resin was shaken for 2-3 h at room temperature or overnight at 4° C. and washed 3 times with PBS. Control resin (tetrazine-free quenched agarose) was prepared in the same way, but pure PBS without amino-tetrazines was used for the initial incubation.


Aliquots (50 μL or more) were withdrawn from each amino-tetrazine solution before incubation with the resin. At the end of incubation, when solutions were removed by vacuum filtration, a second set of aliquots were withdrawn from each solution. All aliquots were analyzed by HPLC, and areas of absorption peaks at 254 nm were measured. Examples of HPLC chromatograms for amino-tetrazines 1-6 are shown in FIG. 7.


HPLC conditions: Luna C18 5 μm 150×4.6 mm, eluted at 1.5 mL/min with a gradient of acetonitrile (CH3CN) in water with 0.1% trifluoroacetic acid (TFA) in both solvents. Injection volume as 10 μL for all samples. Gradient conditions: 0-1 min—5% CH3CN, 1-8 min—linear increase of CH3CN content to 75%, 8-9 min—75% CH3CN, 9-9.5 min—linear decrease of CH3CN content to 5%, 9.5-10 min—5% CH3CN.


Coupling efficiency (CE) for each tetrazine-agarose batch was calculated according to the formula:





% CE=100%×(Absbefore/Absafter),


where Absbefore and Absafter are areas of the corresponding tetrazine peaks on HPLC chromatograms obtained from amino-tetrazine solutions respectively before and after incubation with the resin.


The calculated efficiency of the coupling of the six amino-tetrazine derivatives to the agarose resin is shown in Table 1.









TABLE 1







Coupling efficiency for tetrazine-decorated agarose










Tetrazine
% coupled, mean ± SD







1
90 ± 5



2
80 ± 0



3
92 ± 0



4
17 ± 1



5
83 ± 2



6
21 ± 1







n = 2 for all experiments






As evident from the data in Table 1, the coupling to agarose of all tetrazines except tetrazine 4 and tetrazine 6 proceeded with high efficiency (at least 80%). Tetrazine 4 and tetrazine 6 were coupled to agarose with lower efficiencies (17-21%), but obtained loadings are nevertheless suitable for trapping experiments (Example 6).


Example 5: Column Filling

Tetrazine-conjugated agarose, prepared as described above, was transferred into a double-fritted filtration column (Biotage) and packed between two frits. After swelling in PBS, the resin occupied the volume of 0.5 mL per 60 mg dry weight.


Example 6: Trapping Experiments with TCO-CC49 and TCO-KS254 Solutions in PBS

Tetrazine-agarose columns, two for each tetrazine, each prepared from 33 mg of dry NHS-agarose as described above (bed volume approx. 0.25 mL), and a control column prepared from tetrazine-free agarose, were equilibrated with 2-3 bed volumes of PBS. Antibody TCO-CC49 (approx. 1 TCO groups per 20 kDa molecular weight) or polymer TCO-KS254 (approx. 1 TCO group per 5 kDa molecular weight) were dissolved in PBS with to a mass concentration of 100 μg/mL. Aliquots of these solutions (0.4 mL) were pumped through the tetrazine-agarose columns at 0.5 mL/min pumping speed using an infusion pump (AL-1000, World Precision Instruments). When all solution had entered the resin bed, an aliquot of PBS (0.4 mL) was immediately added on top of it and pumped through the column at 0.5 mL/min. Total eluate (total volume approx. 0.8 mL) was collected and the amount of TCO-CC49 or TCO-KS254 was determined by 111In-tetrazine ([111In]8) titration.


For each column, trapping of both TCO-CC49 and TCO-KS254 was tested, and the column was rinsed with 2-3 volumes of PBS between tests. For pairs of columns with the same tetrazine, the order of testing (TCO-CC49 first or TCO-KS254 first) for one column was opposite to the order of testing for another column.


An aliquot of each trapping column eluate (6 μL) was mixed with an equal volume of 10 μM [111In]8 solution. Resulting mixtures were shaken at 37° C. for at least 1 hour to ensure full consumption of reactive TCO moieties. Then NuPage LDS Sample buffer was added to all mixtures according to the supplier's instructions, samples were heated for 10 min at 70° C. and applied on the NuPAGE 4-12% Bis-Tris SDS-PAGE gels. SDS-PAGE was run in MES-SDS buffer at 150V for 40-45 min. Separation was monitored by running SeeBlue® Plus2 Pre-Stained Protein Standard along with radiolabeled polymer samples. Control mixtures of 6 μL of [111In]8 solution with 6 μL of PBS and reference mixtures of 6 μL of [111In]8 solution and 6 μL of 50 μg/mL solutions of TCO-CC49 or TCO-KS254 were prepared and processed in the same manner. Developed gels were exposed against phosphor storage screens (PerkinElmer Multisensitive), which were then read in the Cyclone Plus phosphorimager (Packard Instruments, USA). Autoradiograms were quantified using Optiquant 3.0 software (Packard Instruments). Examples of obtained SDS-PAGE gel autoradiograms are shown in FIG. 8. Molecular weight reference ladder from the photo of the same gel aligned and merged to the autoradiogram is shown to the left in FIG. 8. Radioactivity found in the section of the gel corresponding to molecular weights of 60 kDa and above (using SeeBlue standards as reference) was considered polymer-bound or antibody-bound.


Trapping efficiency (TE) was calculated according to the formula:





% TE=100%×(1−% BTz/% BnoTz),


where % BTz is the percentage of polymer/antibody bound 111In activity in the eluate collected from a column with tetrazine-conjugated agarose, while % BnoTz is the percentage of polymer/antibody bound 111In activity in the eluate collected from a control column with tetrazine-free agarose.


For each column, evaluation of trapping efficiency for TCO-CC49 and TCO-KS254 was repeated 9 days after the first evaluation. In between evaluations, the columns were stored at 4° C. in phosphate-buffered saline with 0.1% vol/vol of ProClin™ 150 (Sigma-Aldrich).


The trapping efficiencies of agarose resins decorated with the six amino-tetrazine derivatives for each of the TCO-derivatives TCO-CC49 and TCO-KS254, respectively, as determined by 111In tetrazine titration in the first and second evaluations, are shown in FIG. 9 and in Table 2:









TABLE 2







Trapping efficiency for tetrazine-decorated agarose












% TE mean ± SD
% TE mean ± SD
% TE mean ± SD
% TE mean ± SD



1st evaluation
2nd evaluation
1st evaluation
2nd evaluation


Tetrazine
TCO-CC49
TCO-CC49
TCO-KS254
TCO-KS254





1
99 ± 0.4
89 ± 6
80 ± 10
60 ± 1


2
98 ± 0.4
92 ± 0.4
55 ± 11
43 ± 1


3
99 ± 1
96 ± 0.4
93 ± 10
78 ± 1


4
96 ± 6
92 ± 0.4
 75 ± 0.2
56 ± 2


5
98 ± 0.4
89 ± 3
85 ± 5 

67 ± 0.3



6
93 ± 7
72 ± 1
64 ± 0 
50 ± 6





n = 2 for all experiments






As evident from the data in FIG. 9, for all amino-tetrazine derivatives, agarose resins decorated with the corresponding tetrazines trapped 70% or more of TCO-CC49 and 40% or more of TCO-KS254 on a single pass. Trapping efficiencies measured during the second evaluation were only slightly lower than during the first evaluation. Thus, all amino-tetrazine tetrazines, when conjugated to agarose resin, demonstrated efficient removal of TCO-modified compounds from the solution passed through the resin. Two surprising trends were observed in the experimental results. First, trapping efficiencies for methyl-substituted tetrazines 1 and 2 were not significantly lower than for unsubstituted tetrazines 3 and 4 and (bis)pyridyl-substituted tetrazines 5 and 6, even though the kinetics of IEDDA reaction are known to be at least an order of magnitude slower for methyl-substituted tetrazines than for unsubstituted and (bis)pyridyl-substituted analogs (Oliveira, B. L.; Guo, Z.; Bernardes, G. J. L. Inverse Electron Demand Diels-Alder Reactions in Chemical Biology. Chem. Soc. Rev. 2017, 46 (16), 4895-4950; Stéen, E. J. L.; Jørgensen, J. T.; Denk, C.; Battisti, U. M.; Nørregaard, K.; Edem, P. E.; Bratteby, K.; Shalgunov, V.; Wilkovitsch, M.; Svatunek, D.; et al. Lipophilicity and Click Reactivity Determine the Performance of Bioorthogonal Tetrazine Tools in Pretargeted In Vivo Chemistry. ACS Pharmacol. Transl. Sci. 2021, 4 (2), 824-833.). Second, tetrazine-decorated resins with longer linkers between the tetrazine moiety and the solid support (those obtained from tetrazines 2, 4 and 6) demonstrated lower trapping efficiencies of TCO-KS254 polymer than resins with shorter or no linker (obtained from tetrazines 1, 3 and 5). This is counterintuitive, since a longer linker should impart greater accessibility of the tetrazine moiety from the liquid phase, which should lead to more efficient, rather than less efficient, IEDDA-mediated trapping. Trapping efficiency for prepared tetrazine-modified resins was preserved for at least 9 days after preparation, which suggests that the resins can have a long shelf-life, which is valuable for routine application.


Example 7: Extracorporeal Clearing of TCO-CC49 from the Bloodstream of Living Rats

Tetrazine-agarose resin was prepared from tetrazine 2 as described in Example 4, with the following modification: NHS-activated agarose slurry (Pierce/Thermo Fisher Scientific) was used instead of dry agarose, and prepared for coupling as described in the manufacturer's instructions. Control resin (tetrazine-free quenched agarose) was prepared in the same way, but pure PBS without amino-tetrazines was used for the initial incubation. Prepared tetrazine-decorated and tetrazine-free resins were transferred to filtration columns (Biotage) with only the bottom frits present and rinsed with 3-4 column volumes of sterile physiological saline. The total resin bed volume in each column was 1 mL. All operations were performed in a laminar air flow bench to minimize the risk of bacterial contamination. Columns and frits were sterilized in the autoclave before use.


Each column was attached to the extracorporeal clearing circuit consisting of polypropylene and Tygon tubings, Luer adapters and a T-junction with a hydrophobic 0.22 μm PTFE filter acting as a bubble trap (FIG. 10). All circuit parts were sterilized by autoclaving before use, and the whole system was flushed by heparinized saline (20 IU/mL heparin in 9 mg/mL NaCl). The total volume of the circuit was about 2 mL.


Radiolabeled TCO-CC49 for the clearing experiment was prepared by incubating TCO-CC49 (0.7 mg in 1.5 mL PBS, 33 nmol TCO) with [111In]8 (15 MBq, 2 ug, 1.5 nmol, 0.05 eq) for 15 min at room temperature. Attachment of 111In radioactivity to CC49 antibodies was analyzed by radio-HPLC on a Aeris Widepore 3.6 μm C4 column (150×4.6 mm) using a gradient of acetonitrile (CH3CN) in water with 0.1% TFA. Gradient conditions: 0-1 min—5% CH3CN, 1-8 min—linear increase of CH3CN content to 75%, 8-9 min -75% CH3CN, 9-9.5 min—linear decrease of CH3CN content to 5%, 9.5-10 min—5% CH3CN, elution speed 1.5 mL/min. [111In]TCO-CC49 was afforded in a radiochemical yield (RCY) of 95%. Example of HPLC radio-chromatogram of [111In]TCO-CC49 is shown in FIG. 11.


Female Long-Evans rats (300-350 g body weight) were injected intravenously with [111In]TCO-CC49 (150 ug, 4 MBq). After 2 hours, the rats were anesthetized with isoflurane and connected to the clearing circuits: inlets and outlets of the clearing circuits were connected to catheters inserted into, respectively, tail artery and lateral tail vein of the rats. Blood was pumped through the circuit at a rate of 0.5 mL/min for 60 min. Thus, the total blood volume passed through the circuit equaled 30 mL, which is equivalent to a single passage of all blood through the trapping column (assuming 8% of the rats' weight accounts for blood). Samples of arterial blood were taken for gamma counting before and right after the clearing procedure. Furthermore, samples of blood exiting the column at the end of the clearing procedure were taken for gamma counting to compare untrapped 111In activity concentrations for tetrazine-decorated and tetrazine-free columns. At the end of the clearing procedure, the catheters were disconnected and the rats were allowed to recover from anesthesia. 22 hours later, the rats were sacrificed and dissected. Samples of blood and internal organs were taken for gamma counting. The trapping columns were rinsed with saline and adsorbed 111In activity was also measured by gamma counting. 111In activity concentrations were expressed as % injected dose per gram tissue (% ID/g). In total, 3 rats were used for the experiment, of which 1 rat was connected to a tetrazine-decorated column and 2 rats were connected to tetrazine-free (sham) columns. Measured concentrations of 111In activity in the blood and organs of rats are shown in Table 3, Table 4 and FIG. 12.









TABLE 3







Concentration of 111In activity (% ID/g) in the blood of


rats before and after extracorporeal clearing procedure










Sham columns
Tetrazine-decorated



(n = 2)
column (n = 1)













Arterial blood before
2.30 ± 0.07
2.01


clearing


Arterial blood after
2.20 ± 0.22
0.82


clearing


Blood exiting the
2.24 ± 0.13
0.14


column at the end of


clearing


Blood 22 h after clearing
1.14 ± 0.28
0.53
















TABLE 4







Concentration of 111In activity (% ID/g) in the blood and organs


of rats at 22 hours after extracorporeal clearing procedure










Sham columns
Tetrazine-decorated



(n = 2)
column (n = 1)















Blood
1.12 ± 0.28
0.52



Heart
0.25 ± 0.06
0.11



Lung
0.61 ± 0.16
0.35



Liver
1.47 ± 0.16
1.16



Spleen
0.60 ± 0.01
0.34



Kidney
0.48 ± 0.05
0.26



Muscle
0.05 ± 0.02
0.02










As evident from the data in Table 3 and FIG. 12, before the extracorporeal clearing procedure, 111In-activity concentrations in the whole blood differed only by 13% in the rat connected to the tetrazine-decorated column compared to the rats connected to sham columns (control rats). After the clearing, whole blood activity concentration decreased by 59% in the rat connected to the tetrazine-decorated column, but only by 5% in the control rats. Activity concentration in the blood exiting the column at the end of the extracorporeal clearing was 94% lower in the tetrazine column connected rat than in the control rats, demonstrating efficient trapping of TCO-CC49 from the blood in vivo. At 22 hours after the extracorporeal clearing procedure, the whole blood activity concentration in the rat connected to the tetrazine-decorated column was 53% lower than in the control rats, while activity concentration in kidney, liver, lungs, spleen, heart and muscles was 21-56% lower than in control rats (Table 4). The percentage of the total injected 111In activity adsorbed on the trapping column was 1.48±0.54% for the control column and 10.2% (6-fold more) for the tetrazine-decorated column.


Existing publications on the trapping of biotin-modified antibodies from the bloodstream of rats with the aid of streptavidin-decorated resin report trapping efficiency of approximately 80% after triple passage through the column (Garkavij, M.; Tennvall, J.; Strand, S. E.; Sjögren, H. O.; JianQing, C.; Nilsson, R.; Isaksson, M. Extracorporeal Whole-Blood Immunoadsorption Enhances Radioimmunotargeting of Iodine-125-Labeled BR96-Biotin Monoclonal Antibody. J. Nucl. Med. 1997, 38 (6), 895-901). Assuming equal trapping efficiency at each passage, this is equivalent to single passage trapping efficiency of 58%. Thus, the trapping efficiency of our IEDDA-based traps is equal to the trapping efficiency of biotin-streptavidin based traps, even though the kinetics of the IEDDA reaction is known to be several orders of magnitude slower than biotin-streptavidin interaction (Stéen, E. J. L.; Edem, P. E.; Nørregaard, K.; Jørgensen, J. T.; Shalgunov, V.; Kjaer, A.; Herth, M. M. Pretargeting in Nuclear Imaging and Radionuclide Therapy: Improving Efficacy of Theranostics and Nanomedicines. Biomaterials 2018, 179, 209-245.). This is a surprising finding, which highlights the robustness of IEDDA-based trapping.


Remarkably, the extracorporeal trap presented here does not require separation of blood cells from plasma for successful trapping of components dissolved in plasma. This simplifies the construction of the trapping circuits based on the IEDDA principle.

Claims
  • 1. Method for extracorporeal removal of a targeting vector, comprising a therapeutic agent, a diagnostic agent, a synthetic agent, or a part of such agent, and to which the first chemical entity with inverse electron demand Diels-Alder cycloaddition reactivity is attached; comprising: i) Administering the targeting vector to a subjectii) Passing the bloodstream of the patient through a clearing trap column comprising a biocompatible solid support to which a second chemical entity possessing inverse electron demand Diels-Alder cycloaddition reactivity complementary to the first chemical entity of the targeting vector is attachediii) Returning the bloodstream to the subject.
  • 2. Method according to claim 1 wherein the chemical entity of the targeting vector is a dienophile and the chemical entity of the column is a diene; or wherein the chemical entity of the targeting vector is a diene and the chemical entity of the clearing trap column is a dienophile.
  • 3. Method according to claim 2 wherein said diene is selected from the group of compounds of the following structure:
  • 4. Method according to claim 3 wherein said diene is an 1,2,4,5-tetrazine derivative selected from the group comprising:
  • 5. Method according to any of claims 1 to 4 wherein said therapeutic or diagnostic agent is an optical probe such as fluorescein, indocyanine green, fluorescein isothiocyanate, carboxyfluorescein, rhodamine derivatives, coumarin derivatives cyanine derivatives, Cy5.5, Alexa 680, Cy5, DiD (1,1′-dioctadecyl-3,3,3′,-3-tetramethylindodicarbocyanine perchlorate), and DiR (1,1′-dioctadecyl-3,3,3′,-3′-tetramethylindotricarbocyanine iodide); a fluorescent protein such as green fluorescent protein (GFP), Yellow fluorescent protein (YFP), Red fluorescent protein (RFP); a radioisotope such as 3H, 11C, 13N, 18F, 19F, 60Co, 64Cu, 68Ga, 82Rb, 90Sr, 90Y, 99Tc, 99mTc, 111In, 123I, 124, 125I, 129I, 131I, 137Cs, 177Lu, 186Re, 188Re, 211At, 225 Ac, Rn, Ra, Th, U, Pu and 241Am; an antibody such as vancomycin, paclitaxel, doxorubicin, etoposide, irinotecan, SN-38, cyclosporin A, podophyllotoxin, carmustine, amphotericin, ixabepilone, patupilone, rapamycin; a platinum drug or other drugs such as doxycylin, MMP inhibitors, daptomycin L-dopa, oseltamivir, cephalexin, 5-aminolevulinic acid, cysteine, nystatin, amphotericin B, flucytosine, emtricibatine, trimethoprim and sulfamecetriazone.
  • 6. Method according to any of claims 1 to 5 wherein said targeting vector is a small molecule, an antibody, an aptamer, a nanoparticle or a polymer, such as a monoclonal antibody or a polypeptoid polymer.
  • 7. An extracorporeal clearing trap column comprising a biocompatible solid support to which a chemical entity is attached, characterized in that the chemical entity possesses inverse electron demand Diels-Alder cycloaddition reactivity.
  • 8. A chemical entity with inverse electron demand Diels-Alder cycloaddition reactivity attached to an extracorporeal clearing trap column according to claim 7 for use in the extracorporeal treatment of a disease wherein a targeting vector, comprising a therapeutic or diagnostic agent or a part of such agent and a complementary to the chemical entity in the clearing trap, has been administered to a subject.
  • 9. A clearing trap according to claim 7 or 8 wherein the chemical entity of the targeting vector is a diene and the chemical entity in the column is a dienophile or wherein the chemical entity of the targeting vector is a diene and the chemical entity in the column is a dienophile.
  • 10. A clearing trap according to claim 9 wherein said diene is selected from the group comprising:
  • 11. A clearing trap according to claim 9 wherein said diene is a 1,2,4,5-tetrazine derivative selected from the group comprising:
  • 12. A clearing trap according to any of claims 7 to 11 wherein said biocompatible solid support is agarose.
  • 13. A clearing trap according to any of claims 7 to 12 wherein the chemical entity possessing inverse electron demand Diels-Alder cycloaddition reactivity is attached to the biocompatible solid support by a linker.
  • 14. A clearing trap according to claim 13 wherein the linker is 1 to 100 atoms long and comprises one or more of the following: an amide bond, a urea bond, an alkane chain, a polypeptide, a polypeptoid polymer, polyethylene glycol, N-(2-hydroxypropyl)methacrylamide, polysarcosine, a thiosuccinimide ring or a triazole ring as structural elements connecting the chemical entity possessing inverse electron-demand Diels-Alder reactivity to the biocompatible solid support.
  • 15. Use of a clearing trap according to any of claims 7 to 14 for removing from a bloodstream targeting vectors comprising a therapeutic or diagnostic agent or a part of such agent and a chemical entity with inverse electron demand Diels-Alder cycloaddition reactivity complementary to the chemical entity possessing inverse electron demand Diels-Alder cycloaddition reactivity in the clearing trap.
Priority Claims (1)
Number Date Country Kind
20191448.8 Aug 2020 EP regional
PCT Information
Filing Document Filing Date Country Kind
PCT/EP2021/072932 8/18/2021 WO