The present invention relates to fluorescent markers and methods for imaging diseases, and in particular though non-limiting embodiments, to cloaked fluorophores which activate in the presence of enzymes present in tumor tissues and inflammatory diseases.
Molecular probes whose fluorescent reporter signal is generated by enzyme activation (turn-on probes) hold great potential for identification, enumeration and study of living cancer cells and/or diseased tissues. Such probes may be invaluable for accurate and early diagnoses and optimization of surgical and personalized chemotherapeutic treatments. In particular, successful development of enzyme-activatable probes that can yield rapid, highly sensitive, and selective reporting of species or events associated with cancer cells may allow for definition of diseased and healthy tissue borders during fluorescence-assisted surgical resection of cancerous tissues. Enzyme-activatable probes may also provide and/or enhance collection of real-time information on tumor cell microenvironment or the pharmacodynamic effect of drugs on specific tumor cells.
To date, live cancer cell detection with varying degrees of selectivity and sensitivity has generally been limited to routes employing extracellular or cell-surface protein recognition of a covalently attached component of the probe or reporter. However, living cancer cells may also be identified and their type differentiated by targeting endogenous, intracellular, cancer-associated enzymes. Hydrophobic small-molecule (<1000 Da), turn-on probes provide a possible vehicle for such identification not possible with larger molecules used in recognition-based probe models.
Enzymatically stimulated removal of a fluorescence quencher from a fluorescence probe is a potentially significant and unexplored route for turn-on probes. Such probes may provide selectivity and sensitivity based upon the activities of an endogenous enzyme or cofactor. In particular, this method may employ probes having reporter fluorescence quenched by photoinduced electron transfer (PeT) from a covalently attached enzyme substrate. Fluorescence may ensue from the reporter upon removal of the quencher substrate by an endogenous, cytosolic, disease-associated enzyme found in diseased cells from a wide range of origins.
NAD(P)H:quinone oxidoreductase isozyme I (NQO1) is an enzyme intimately involved with cancer. NQO1 is a gatekeeper for 20S proteasomal degradation of the p53, p73a, and p33 tumor suppressors. NQO1 is also present in a diverse group of human tumor cells (e.g., pancreas, colon, breast, lung, liver, stomach, kidney, head/neck, and ovaries) at levels 2- to 50-fold greater than in normal tissue. Furthermore, NQOI content/activity in tumor cells is strongly affected by cell life cycle and therapeutic approaches. Therefore, NQO1 provides a good target for identifying diseased cells and/or tissues, which will often express increased levels of the enzyme. Importantly, NQOI is found in the cytosol and catalyzes the strict two-electron reduction of quinones to hydroquinones. Moreover, other intracellular or extracellular enzymes and cofactors may be expressed at heightened levels in cancer tissues and/or inflammatory diseases.
Current fluorescent probes for the detection of disease and/or cancer are always-on probes and generally require additional steps, including washing, to determine the presence of disease. The probes generally are not selective and are often expensive, including costs associated with the numerous steps required by the methods utilizing said probes.
Accordingly, there is need for a turn-on probe having a fluorescence reporter that may be activated by intracellular or extracellular enzymes and/or cofactors expressed at heightened levels in cancer tissues and/or inflammatory diseases.
In an exemplary embodiment of the present invention, a compound is provided having a formula:
wherein R=Me.
In an exemplary embodiment of the present invention, a compound is provided having one of formulas 1, 2, and 3:
R1, R2, R3, R4, R5, R6, R7, R8, R14, R15, R16, R17, R18 represent, independently, H, Cl, Br, I, CH3, n-CyH2y+1 (where y is an integer value from 1 to 3), n-CjH2j+1O (where j is an integer value from 1 to 3), or (EO)z—R9 (where EO is ethylene oxide and z is an integer value from 3 to 100). R9 is H, CH3 (“methyl”), or CF3CH2OC(O)CH2. M is CH2, —C(O)— (“carbonyl”), or CH—R8. X is —C(O)NR10— (“C-amide”), —C(S)NR10— (“C-thioamide”), —C(O)O— (“C-ester”), —C(O)S— (“C-thioester”), —C(O)NR10C(O)— (“imide”), —C(O)OC(O)— (“anhydride”), —CH2OC(O)— (“O-ester”), —CH2SC(O)— (“S-thioester”), —CH2NR10C(O)— (“N-amide”), —CH2NR10C(S)— (“N-thioamide”), —CH2OC(O)O— (“carbonate”), —CH2NR10C(O)NR11— (“urea”), —CH2NR10C(S)NR11— (“thiourea”), —CH2OC(O)— (“O-ester”), —CH2OC(O)NR10— (“O-carbamate”), —CH2NR10C(O)O— (“N-carbamate”), —CH2NR10C(O)S— (“N-thiocarbamate”), —CH2SC(O)NR10— (“S-thiocarbamate”), —CH2OS(O)(O)— (“mesylate”), or —CH2OP(O)(O)O— (“phosphate”). R10, R11, R12, R13 represent, independently, H, CH3, or n-CyH2y+1 (where y is an integer value from 1 to 3), or or (EO)z—R9 (where EO is ethylene oxide and z is an integer value from 3 to 100); R9 is H, CH3 (“methyl”), or CF3CH2OC(O)CH2. Y and Z represent, O and O (“carbamate”), S and O (“S-thiocarbamate”), N and O (“urea”), or N and S (“thiourea”). W is an integer value of 1 or 2, indicating the number of methylenes (—CH2—).
In an exemplary embodiment of the present invention, a cloaked fluorophore is provided having: a fluorescent napthalimide reporter; a quinoidal moiety; and a linker. The linker links the quinoidal moiety to the reporter.
In an exemplary embodiment of the present invention, a method of detecting diseased cells is provided, including: administering to cells a compound of formula
and analyzing the cells for fluorescence. R=Me. Fluorescence indicates disease. The diseased cells may be cancerous. The diseased cells may express NAD(P)H:quinone oxidoreductase isozyme I. The method may include analyzing the cells under a fluorescent microscope. The method may include analyzing the cells with multiphoton microscopy imaging. The diseased cells may be circulating tumor cells. The method may include analyzing the cells with a flow cytometer.
In an exemplary embodiment of the present invention, a method of delineating boundaries of a cancerous tumor in tissue is provided, including: administering to the tissue a compound of formula
analyzing the tissue for fluorescence; and identifying boundaries between portions of tissue expressing fluorescence and portions of tissue not expressing fluorescence.
Embodiments of the present disclosure provide cloaked fluorophores which may be activated by intracellular or extracellular enzymes or upregulated cofactors. Embodiments may be activated by enzymes or cofactors having increased activity associated with diseased cells, such as cancer cells. Embodiments may incorporate a naphthalimide-based fluorophore cloaked by a quinone group that may be removed upon enzymatic activation. The fluorophore and quinone group may be bound by a linker, such as ethanolamines or substituted aminobenzyl alcohols. Embodiments of the present invention provide methods of identifying and quantifying cancer-related events and targets for future personalized oncology. Embodiments of the present invention provide synthetically accessible and economically viable probe molecules fully able to report the presence of disease events and targets in a rapid and highly selective and sensitive fashion.
In example embodiments, there is provided a PeT-quenched fluorescence probe which may be activated by NQO1. Embodiments of the fluorescence probe may be hydrophobic and small in molecular weight, allowing the fluorescence probe to readily penetrate membranes of cancer cells. Embodiments may undergo rapid and preferential, two-electron reduction of a quinone quencher subunit, allowing intensely light-emissive reporter to fluoresce. Efficacious PeT quenching of fluorescence prior to subunit self-cleavage may be ensured by selection of electronic properties of a naphthalimide reporter and a quinone quencher. Embodiments of the highly fluorescent reporter may be retained by cells, and may exhibit strong a Stokes shift between absorption and fluorescence emission maxima due to a push-pull internal charge transfer mechanism associated with the naphthalimide scaffold. Novel characteristics of the present invention may allow for rapid and enhanced signal-to-background imaging and detection of living cancer cells without the typical requirement of unactivated probe removal from the environment. Embodiments of the profluorogenic probe may provide real-time, highly sensitive, and selective human tumor cell analysis and differentiation based on NQO1 content.
In an example embodiment of the present disclosure, there is provided a novel compound of the formula shown in
Embodiments of the present invention provide a probe (Q3NI) having fluorescence signal of a naphthalimide reporter quenched via oxidative electron transfer (OeT) by a covalently attached quinone propionic acid motif. See, e.g.
was used to examine possible quinone propionic acid quenchers and 1,8-naphthalimide reporters as well as linkers between the OeT quencher and the NI reporter, so as to ensure that quenching is thermodynamically feasible and efficient. In this equation, ED is the redox potential of the donor and EA that of the acceptor, ΔG00 is the energy of the first excited singlet state of the reporter, and e2/εd is the Coulombic interaction energy of the ion pair, known to be 0.06 eV. The energy of the first excited singlet state of NI was measured to be 3.06 eV. From voltammetric measurements, ED of NI was determined to be 1.74 V, and EA for the quinone propionic acid group of Q3NI was found to be −1.01 V. See,
In embodiments of the present invention, fluorescence dequenching of Q3NI is achieved by reduction-initiated removal of quinone. To determine if it is possible to produce the NI reporter from the Q3NI probe by the cyclizative cleavage reaction of the hydroquinone via the gem-dialkyl effect that occurs subsequent to two-electron reduction of the quinone, strong reducing agent sodium dithionite was added to aqueous solutions of Q3NI. Under these conditions, it was found that NI is rapidly released as indicated by the increase in time-dependent fluorescence intensity (
In embodiments of the present in invention hNQO 1 reduces fluorescent probes cloked with a quinone moiety. In embodiments of the present invention, Q3NI is a probe capable of activation by hNQO1 to yield the NI reporter at a significant rate. Apparent kinetic parameters of Q3NI were obtained from Michaelis-Menten kinetic treatment of the time-dependent NI reporter production, namely the Michaelis constant (Km), maximum velocity (Vmax), catalytic constant (kcat), and substrate specificity (kcat/Km). The high rate of NI reporter production under in vitro conditions is readily apparent in
Embodiments of the present invention may allow for cancer cells to be rapidly visualized and differentiated. The colorectal carcinoma cell line HT-29 and the nonsmall cell lung cancer (NSCLC) A549 cell line are known to possess significant hNQO1 activity, while the NSCLC H596 cell line has been reported to have undetectable hNQO1 activity. After a 10 min incubation period in a cell culture solution containing 2×10−5 M Q3NI, it was possible to differentiate between the various substrate-cultured cells (4.84 cm2) using only a handheld fluorescent lamp emitting at 365 nm and the unaided eye. Both HT-29 (3.69×106 total cells) and A549 (5.72×106 total cells) appeared fluorescent blue, while H596 (3.96×106 total cells) exhibited no apparent emission. The ability to visually determine the presence of hNQO1 in a small number of cells is due to the marked difference in fluorescence from the unquenched NI reporter (Φ=0.23) and quenched Q3NI probe (Φ=0.007) and the large Stokes shift of the NI reporter that results in fluorescence emission in the visible spectrum (400 nm to ˜600 nm). These outcomes point to use of the Q3NI probe sensor in the real-time, visible (without the aid of imaging equipment), and accurate determination of tumor/healthy tissue borders so as to allow for surgical resection of tumors with small foci.
Flow cytometry assays were used to assess the applicability of the Q3NI probe to rapidly detect and quantify tumor cells containing hNQO1. See,
In agreement with flow cytometry data, wide-field imaging of fixed hNQ01-positive cells exposed to the Q3NI probe of the present invention for 10 min revealed significant probe uptake and activation that leads to intracellular NI fluorescence for the A549 and HT-29 cell lines; however, minimal signal was observed in the hNQ01-negative H596 cells. There was no indication of reporter in the nucleus, pointing to the lack of NQOI there; this is in contrast to previous work using immunohistochemical staining of penneabilized, fixed cells. The average cytosolic signal was 9 times higher in A549 cells versus NQOI-negative H596 cells, while it was 23 times higher in HT-29 cells compared to the NQOI-negative H596 cells. After incubating live HT-29 cells for 20 min with Q3NI followed by exposure to acidic organelle-specific Lysotracker Red in the media in the imaging dish, it was found that the majority of the NI signal originated from the cytosolic region. Accumulation of the basic (secondary amine pKa ˜11) NI occurred in acidic late endosomal and lysosomal vesicles, a beneficial outcome that leads to enhanced intracellular retention of NI. The higher signal-to-background value achieved for activation of Q3NI to NI reporter (9- to 23-fold) in target versus nontarget cells, relative to that of other exogenously introduced sensor probes for whole tumor analysis (2.5- to 5-old), points to the potential of Q3NI to provide highly selective tumor cell analyses with low limits of detection, even in the face of possible background fluorescence from hemoglobin and other species. In addition, results indicate that dye quantum yield is affected little, and there is no apparent efflux of NI reporter from cells during paraformaldehyde fixing, as noted by sustained fluorescence in fixed samples stored for 10 months in the laboratory ambient. Collectively, there is great potential for use of our probe/reporter system for ex vivo quantitative analysis of excised tumor cells and long-term in vivo and in vitro imaging.
Multiphoton (MP) microscopy imaging of cells and tissues may be more advantageous than traditional fluorescence microscopy, because use of the characteristic long-wavelength photons offers higher fluorophore and cellular photostability that provides extended imaging duration, less background signal from out-of-focus excitation and scattering events, and deeper penetration depth. In addition, MP imaging is ideal for direct observation of targets in their physiological environment and ex vivo thick-specimen sampling where 2D and 3D maps can be generated. During incubation with complete growth medium containing 2.0×10−5 M Q3NI, 2-photon microscopy revealed significant fluorescence signal from NI in living, hNQO1-positive HT-29 and A549 cells and minimal signal in two living, hNQO1-negative cell lines, H596 and H446. The average fluorescence signal was determined to be 13-fold higher in A549 cells compared to H596 cells, and 3.66×104-fold higher versus H446 cells. Similar results were obtained with the HT-29 cell line, with the cytosolic intensity being 15- and 4.51×104-fold higher compared to H596 and H446 cells. As before, the signal appears somewhat heterogeneous throughout the cytosolic space of the HT-29 and A549 cells due to NI accumulation in acidic organelles. To ensure Q3NI and NI had little effect on cell health, cells were incubated in a 2.0×10−5 M Q3NI solution in complete growth medium for 1 h and 1 day, and then cell viability was assessed with a trypan blue assay. After 1 h, cell viability for HT-29, A549, and H596 was 97.7%, 98.8%, and 100%, while it was 97.7%, 98.7%, and 98.4% after 24 h. Of particular importance is the real-time nature of the Q3NI probe in imaging, as this system does not require the time-consuming wash steps characteristic of always-on reporters.
Alternative embodiments of a cloaked fluorescent probe are contemplated by the present invention. Embodiments of the present invention may be a compound represented by Formula 1, 2, or 3 of
Embodiments may be activated to fluoresce by NQO1 which may be present in diseased cells such as cancerous cells. Embodiments may be activated to fluoresce by intra- and/or extracellular enzymes and/or cofactors present in cancerous tissues and/or inflammatory diseases.
Embodiments of the present invention include methods for in vivo detection of cancer cells. Embodiments include methods of detecting circulating tumor cells (CTCs) which may include a probe of the present invention as part of a flow cytometry assay. Embodiments may allow for enumeration of cancer cells. Further embodiments include methods of imaging cancer cells and/or tissues, which methods may be incorporated into various medical and/or surgical procedures or strategies to treat cancer. In still further embodiments, methods are provided to image inflammatory diseases, cells, and/or tissues having elevated NQO1 activities or cofactor activities. Embodiments may be employed to localize and/or image various diseases and/or diseased tissues. In still further embodiments, methods are provided for early detection of cancer and/or increased NQO1 activities.
While the embodiments are described with reference to various implementations and exploitations, it will be understood that these embodiments are illustrative and that the scope of the inventions is not limited to them. Many variations, modifications, additions, and improvements are possible. Further still, any steps described herein may be carried out in any desired order, and any desired steps may be added or deleted. Support for the present invention, including example embodiments of the present invention, may be found in the attached documents and figures, all of which arc expressly incorporated herein in their entirety by reference hereto.
This application claims benefit of U.S. Provisional Application 61/804,961 filed Mar. 25, 2013, which is incorporated herein by reference.
The invention was made with U.S. Government support under grant R21 CA135585 awarded by the National Institutes of Health and grant CHE 0910845 awarded by the National Science Foundation. The U.S. Government has certain rights in the invention.
Filing Document | Filing Date | Country | Kind |
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PCT/US14/31657 | 3/25/2014 | WO | 00 |
Number | Date | Country | |
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61804961 | Mar 2013 | US |