The present invention relates to a HMG-CoA reductase degradation inducing compound, a method for preparing the same, and the use thereof.
Intracellular cholesterol homeostasis may be maintained through transcriptional regulation of HMG-CoA reductase through a sterol regulatory element-binding protein (SREBP) pathway. The SREBP is a transcriptional regulator present in the endoplasmic reticulum membrane, which forms a complex with SREBP cleavage-activating protein (SCAP). When the concentration of the intracellular cholesterol drops, the complex moves to the Golgi apparatus to induce cleavage of the SREBP, and the activated SREBP enters cell's nucleus to promote transcription of HMG-CoA reductase. On the other hand, when the concentration of the intracellular cholesterol elevates, INSIG (insulin-induced gene) binds to SCAP and inhibits the movement of the SREBP-SCAP complex to the Golgi apparatus, thereby inhibiting the transcription of HMG-CoA reductase.
The HMG-CoA reductase is involved in conversion of HMG-CoA to mevalonate in a mevalonate pathway, which is a pathway for cholesterol biosynthesis in hepatocytes, with the cholesterol as the end product. Statin-based compounds are designed to bind the active site of HMG-CoA reductase, thereby inhibiting enzyme activity. Through the drug mechanism, the statin-based compounds may inhibit intracellular cholesterol production and lower blood cholesterol concentration and reduce the risk of cardiovascular disease. However, when the intracellular cholesterol concentration is lowered by statin, the SREBP pathway may be activated to increase expression of the HMG-CoA as a compensatory mechanism. As a result, in addition to weakening effect of statin, higher dose of statin is necessary, which may lead to risk of type 2 diabetes, muscle pain, or the like. In addition, patients taking high dose of statins for a long period of time in which HMG-CoA reductase are induced, the prognosis may worsen if the patient stops taking the drug. Therefore, there is a demand for alternative drug capable of solving the disadvantages of statin therapy as described above.
Recently, a proteolysis targeting chimera (PROTAC) has been proposed as a small molecule-based platform technology capable of inducing proteolysis of a target protein in the human body. The PROTAC is a bifunctional compound in which a ligand molecule that binds to disease-related target protein and an E3 ubiquitin ligase binding moiety are linked by a chemical linker. Theoretically, the PROTAC compound is capable of inducing degradation of the target protein by placing the disease-related target protein near the E3 ubiquitin ligase. In the case of the PROTAC compound having the HMG-CoA reductase as a target protein, International Patent Publication No. WO2019/109415 A1 discloses some bifunctional compounds in which atorvastatin and a binding moiety for E3 ubiquitin ligase CRBN are linked by a triazole group linker.
However, the above document only describes a synthesis example of only one type of atorvastatin statin-derived PROTAC compound. In addition, the above document merely shows partial confirmation of degradation effects of HMG-CoA reductase in CHO cell line (SRD-15) artificially mutated to lack the function of INSIG, etc. The CHO cell line is histologically different from the hepatocyte environment in which statins actually act, and has basically different expression and activity characteristics of HMG-CoA reductase. In addition, the cell line is engineered to maintain a constant level of expression of HMG-CoA reductase through artificially mutating a gene. Thus, unlike the hepatocyte environment, the compensatory mechanism of HMG-CoA reductase depending on the intracellular cholesterol concentration does not occur. In other words, in actual hepatocytes, when the intracellular cholesterol concentration is lowered by administering statins, the HMG-CoA reductase is overexpressed as a compensatory mechanism, and as a result, the pharmacological effect of statins is weakened, but the SRD-15 cell line does not reflect these hepatocyte characteristics. Therefore, it is not sufficient to conclude from the above document that the PROTAC compound using atorvastatin as a binding moiety to the HMG-CoA reductase effectively induces degradation of the HMG-CoA reductase while overcoming the compensation mechanism caused by atorvastatin action in the actual hepatocyte environment.
In addition, the target protein degradation effect of the PROTAC compound may vary depending on the type of the target protein ligand and the E3 ubiquitin ligase binding moiety constituting the PROTAC compound (see Burslem and Crews, 2017, etc.). Therefore, it is extremely difficult to predict a structure of a compound capable of effectively inducing the degradation of the HMG-CoA reductase among a wide range of statin-derived PROTAC compounds that are not described in WO2019/109415 A1.
An object of the present invention is to provide HMG-CoA reductase degradation inducing compounds.
Another object of the present invention is to provide a method for preparing the compounds.
Still another object of the present invention is to provide a use of the compounds.
HMG-CoA Reductase Degradation Inducing Compounds
The present invention provides novel compounds that induce HMG-CoA reductase degradation. Specifically, the present invention provides a bifunctional compound in which a HMG-CoA reductase binding moiety and an E3 ubiquitin ligase-binding moiety are linked by a chemical linker.
In one general aspect, there is provided a compound represented by the following Formula I, a stereoisomer thereof or a pharmaceutically acceptable salt thereof:
ULM-Linker-PTM [Formula I]
in the Formula I above,
ULM is CRBN, VHL or IAP E3 ubiquitin ligase binding moiety;
PTM is HMG-CoA reductase binding moiety represented by the following Formula II:
{in the Formula II above,
R1 is
RL is a single bond or C1-6 alkylene that is optionally substituted by 1-4 substituents selected from the group consisting of —CH3, —CN, NH2, —OH and halogen;
R2 is selected from the group consisting of hydrogen, halogen, —OH, —O(C1-6 alkyl), —O(C3-8 cycloalkyl), —OCO(C1-6 alkyl), —O(C3-8 cycloalkyl) and silyl ether, optionally substituted by one or more straight- or branched-C1-4 alkyl, 5- to 10-membered heterocyclyl, 6- to 10-membered aryl, 6- to 10-membered heteroaryl, halogen, NH3, OH, or CF3;
R3 and R4 are each independently —OH or —O(C1-3 alkyl); or R3 and R4 together form —O—;
R5 and R6 are each independently hydrogen, halogen, OH, C1-4 alkyl, C1-4 alkenyl, OC1-4 alkyl, CF3, NH3, NO2 or CN;
R7 is hydrogen or C1-3 alkyl; and
is a single bond or a double bond}; and
Linker is a chemical group that links ULM and PTM.
In the Formula II, indicates a covalent bond that links PTM into Linker.
(1) E3 Ubiquitin Ligase Binding Moiety (ULM)
In one embodiment of the present invention, ULM is a CRBN E3 ubiquitin ligase binding moiety.
In the present invention, CRBN means Cereblon E3 ubiquitin ligase. CRBN constitutes an E3 ubiquitin ligase complex together with DDB1, Cul4A and ROC1, wherein the CRBN is a substrate recognition subunit of the complex. Some compounds capable of binding to the CRBN E3 ubiquitin ligase are known in the art. For example, after it was known that thalidomide binds to the CRBN E3 ubiquitin ligase (see Ito et al. 2010), it has been reported that a number of immunomodulatory imide drugs (IMiD) including lenalidomide and pomalidomide have CRBN binding ability (see Chamberlain and Brian. 2019; Akuffo et al. 2018; and Burslem et al. 2018, etc.).
In one embodiment, the CRBN E3 ubiquitin ligase binding moiety in Formula I is represented by the following Formula A-1:
wherein:
is a ring selected from the group consisting of
X1 is a single bond, —CH2—, —NH—, —O—, —CH2CH2—, —CC— —CO—, —COO—, —NHCO— or —CONH—;
X2 is —CH2—, —CH(C1-4 alkyl)-, —NH—, —N(C1-4 alkyl)-, —O—, —CO—, —CH2—CH2—, —NH—CH2—, —NH—CH(C1-4 alkyl)-, —N═CH—, —N═C(C1-4 alkyl)- or —N═N—;
X3 is hydrogen or C1-4 alkyl; and
X4 is hydrogen, halogen, C1-6 alkyl, CN, NH2, NO2, OH, COH, COOH or CF3.
In one embodiment, Formula A-1 is represented by the following Formula A-2:
wherein:
X2 is —CH2—, —CH(C1-4 alkyl)-, —CO— or —N═N—; and
X3 is hydrogen or C1-3 alkyl.
In certain embodiment, Formula A-2 is selected from the group consisting of:
One example of CRBN E3 ubiquitin ligase binding moieties of Formula A-1 or A-2 may be derived from the compounds having the following structures (Chamberlain and Brian. 2019; Akuffo et al. 2018; etc.):
Another example of CRBN E3 ubiquitin ligase binding moieties of Formula A-1 or A-2 may be derived from the compounds having the following structures (Burslem et al. 2018; etc.):
In another embodiment of the present invention, ULM is a VHL E3 ubiquitin ligase ligand binding moiety.
In the present invention, VHL means a von Hippel-Lindau tumor suppressor. VHL constitutes a VCB E3 ligation complex together with Elongin B, Elongin C, CUL2 and Rbx1, wherein VHL is a substrate recognition subunit of the complex. Some compounds capable of binding to the VHL E3 ubiquitin ligase are known in the art. For example, after it was known that peptide such as Ala-Leu-Ala-(Hy)Pro-Tyr-Ile-Pro heptapeptide (see Schneekloth et al. 2004) and Leu-Ala-(Hy)Pro-Tyr-Ile pentapeptide (see Rodriguez-Gonzalez et al. 2008), an improved low-molecular VHL E3 ubiquitin ligase binding compound has been reported (see Buckley et al. J. Am. Chem. Soc. 2012; Buckley et al. Ang. Chem. Int. Ed. 2012; Galdeano et al. 2014; Soares et al. 2017, etc.).
In one embodiment, the VHL E3 ubiquitin ligase binding moiety in Formula I is represented by the following Formula B-1:
wherein:
n is an integer from 1 to 3;
is 5- to 6-membered cycloalkyl, phenyl, 5- to 6-membered heterocycloalkyl, or 5- to 6-membered heteroaryl, wherein the heterocycloalkyl or the heteroaryl contains one to three N, O or S atoms;
Y1 is hydrogen or C1-4 alkyl;
Y2 is C1-4alkyl, hydroxy(C1-4alkyl), —(C0-2alkyl)-COH, C3-8cycloalkyl, or phenyl;
Y3 is hydrogen, or
Y4 is hydrogen, halogen, C1-4 alkyl, —O(C1-4 alkyl), C3-6 cycloalkyl or 4- to 6-membered heterocycloalkyl, optionally substituted by halogen, —OH, —CN, —NHCOH, —NHCOCH3, —COH or —COCH3; and
Y5 is hydrogen or C1-4 alkyl.
In one embodiment, the VHL E3 ubiquitin ligase binding moiety in Formula B-1 is selected from the group consisting of the following Formula B-2-1 and B-2-2:
wherein:
is 5-membered heteroaryl ring selected from the group consisting of oxazole, isoxazole, thiazole, isothiazole, imidazole, pyrazole, triazole, oxadiazole, pyrrole, pyrrolidine, furan, dihydrofuran and tetrahydrofuran;
Y1 is hydrogen or C1-3 alkyl; and
Y4 is C1-4 alkyl or C3-5 cycloalkyl, optionally substituted by hydrogen or halogen.
In certain example, Formula B-2-1 is represented by the moiety selected from the group consisting of:
In certain example, Formula B-2-2 is represented by the moiety selected from the group consisting of:
One example of VHL E3 ubiquitin ligase binding moieties of Formula B-1, B-2-1 or B-2-2 may be derived from the compounds having the following structures (Galdeano et al. (2014); etc.).
Another example of VHL E3 ubiquitin ligase binding moieties of Formula B-1, B-2-1 or B-2-2 may be derived from the compounds having the following structures (Soares et al. 2017; etc.).
In one embodiment, ULM of Formula I is IAP E3 ubiquitin ligase binding moeity.
In the present invention, IAP (inhibitor of apoptosis protein) refers to a protein family including 1 to 3 BIR (baculoviral IAP repeat) domains. In human, total 8 IAP members (XIAP, cIAP1, cIAP2, Livin, ILP2, Survivin, NAIP, Apollon) have been reported and are known to inhibit apoptosis in various cellular systems. Since IAP contains an E3 ubiquitin ligase-specific domain that recognizes a substrate and promotes its ubiquitination, it has been reported that it can be used as an E3 ubiquitin ligase target of PROTAC compounds together with CRBN and VHL (see Naito, Mikihiko, Nobumichi Ohoka, and Norihito Shibata. “SNIPERs—Hijacking IAP activity to induce protein degradation.” Drug Discovery Today: Technologies 31 (2019): 35-42; et al.).
In one embodiment, IAP E3 ubiquitin ligase binding moiety is represented by the following Formula C-1:
wherein:
Z1 and Z2 are each independently hydrogen, C1-4 alkyl or C3-6 cycloalkyl;
is phenyl or 5- to 6-membered heteroaryl.
In one embodiment, Formula C-1 is represented by the following Formula C-2:
wherein, Z1 and Z2 are as same defined in the above.
In the present invention, Linker may be attached into ULM at a position necessary to exhibit the bifunctionality of PROTAC. In Formulas A-1, A-2, B-1, B-2-1, B-2-2, C-1 and C-2 of the present invention, the Linker may be covalently linked through . If there
is not indicated, one hydrogen in the moiety of E3 ubiquitin ligase binding compound may be substituted into a single bond to be connected to the Linker.
(2) Protein Target Moiety (PTM)
In the compound represented by Formula I of the present invention, PTM, a moiety that performs a target protein ligand function, is a Type 1 statin or a derivative thereof.
Statins are low-molecular compounds that inhibit HMG-CoA reductase (3-hydroxy-3-methylglutaryl-coenzyme A), and are known to bind to HMG-CoA binding sites and inhibit the enzymatic activity of HMG-CoA reductase. Various types of statins are known, and they can be largely classified into Type 1 statins and Type 2 statins according to their molecular structure (see E S Istvan, J Deisenhofer, Science (2001); Istvan, Eva. Atherosclerosis Supplements (2003); etc.).
Type 1 statins share the form of a decalin ring, and can bind to the active site of HMG-CoA reductase through the decalin ring. Examples of known Type 1 statins include compactin, pravastatin, simvastatin, lovastin, and the like.
On the other hand, Type 2 statins are distinguished from Type 1 statins in that they have a fluorophenyl and/or methylethyl group form instead of the decalin ring structure of Type 1 statins, and bind to HMG-CoA reductase through the group. Examples of type 2 statins include rosuvastatin, atorvastatin, cerivastatin, fluvastatin, and the like.
In the compound represented by Formula I of the present invention, Type 1 statin derivative refers to a chemical analog containing a substituent that can be suitably modified to exhibit bifunctionality while sharing the core structure of a known Type 1 statin. Specifically, Type 1 statin is a moiety represented by Formula II described above.
In one embodiment of Formula II of the present invention is represented by the following Formula III-1:
wherein:
R1 is
R2A is selected from the group consisting of hydrogen, C1-6 alkyl, C3-6 cycloalkyl, 5-6-membered heterocyclyl, phenyl, 5-6-membered heteroaryl and
and
S1 to S3 are each independently hydrogen, C1-6 alkyl, C3-6 cycloalkyl, 5-6-membered heterocyclyl, phenyl or 5-6-membered heteroaryl.
In Formula III-1, in one embodiment, R2A—O— is hydroxy.
In Formula III-1, in one embodiment, R2A—O— is silyl ether. In this case, R2A may be selected from the group consisting of:
(see Examples 19-22, 27-30, 35-38, 46-57, 65, 67, 70, 71, 72, 74, 76, 78, 80, 82, 84, 86, 88, 90, 92, 94, 96, 98, 100, 102, 104, 108-109, 114, 116, 118, 120, 122, 124-125, 128, 130, 132, 134, 136, 138, 140, 142, 144, 146, 148, 150 or 155).
In Formula III-1, in one embodiment, R2A—O— is selected from the group consisting of methoxy, ethoxy, propoxy and butoxy (see Examples 69, 110).
In one embodiment, Formula II is represented by the following Formula III-2 (see Example 153):
wherein R1 is
In one embodiment, Formula II is represented by the following Formula III-3 (see Examples 106, 107 and 154):
wherein R1 is
R2B is selected from the group consisting of hydrogen, C1-6 alkyl, C3-6 cycloalkyl, 5-6-membered heterocyclyl, phenyl, 5-6-membered heteroaryl and
S1 to S3 are each independently hydrogen, C1-6 alkyl, C3-6 cycloalkyl, 5-6-membered heterocyclyl, phenyl or 5-6-membered heteroaryl; and
R3 and R4 are each independently —OH or —OCH3.
In Formula II, in one embodiment, R2 is hydrogen (see Example 153) or halogen (see Example 113).
In Formula II, in one embodiment, R2 is CH3COO— (see Example 111);
In Formula II, in one embodiment, R2 is Ph-CH2O— (see Example 112).
In one embodiment, the PTM moiety is PTM moiety that is included in the compound selected from the group consisting of Compound 1 to 169.
(3) Linker
In one embodiment of the present invention, the Linker as defined in Formula I is represented by the following Formula L:
wherein:
and
are each independently bond;
LULM is covalently bonded to ULM moiety through that is linked thereto,
LPTM is covalently bonded to PTM moiety through that is linked thereto,
LULM, LPTM and LINT are independently selected from the group consisting of null, a single bond, —CH2—, —NH—, —O—, —S—, —SO—, —SO2—, —CO—, —CH2CH2—, —CHCH—, —CC—, —CH2CH2O—, —OCH2CH2—, —CH2CH2S—, —SCH2CH2—, —COO—, —CONH—, —NHCO— and
optionally substituted by one or more C1-6 alkyl, C3-8 cycloalkyl, halogen, hydroxy, amino, nitro, cyano or haloalkyl {wherein
is cycloalkyl, heterocycloalkyl, aryl, or heteroaryl}; and
p is an integer from 1 to 30.
In one embodiment, p is 1 or more; 5 or more; 10 or more; 15 or more; 20 or more; or 25 or more. In another embodiment, p is 25 or less; 20 or less; 15 or less; 10 or less; 5 or less.
In Formula L above, LULM may be
wherein:
LU1 is selected from the group consisting of a single bond, —CH2—, —CH2CH2—, —CH═CH—, —CC—, —NH—, —NCH3—, —CO—, —NHCO— and —O—;
LU2 is selected from the group consisting of a single bond, —CH2—, —NH—, —O—, —CO— and —CONH—; and
is null, C1-6 alkyl or a ring selected from the group consisting of 3- to 10-membered cycloalkyl, 4- to 10-membered heterocycloalkyl, 6- to 10-membered aryl and 5- to 10-membered heteroaryl.
In certain embodiment,
is selected from the group consisting of —CH2—, —NH—, —O—, —NHCO—, —CC—, —O(CH2)—CO— and —O(CH2)CONH—.
In certain embodiment,
is selected from the group consisting of
In Formula L above, LPTM may be
wherein:
LP1 is selected from the group consisting of a single bond, —O—, —S—, —NH—, —N(C1-4 alkyl)-, —CH2—, —CH(C1-4 alkyl)-, —CH2NH—, and —CH2CH2—;
LP2 is selected from the group consisting of a single bond, —CO—, —COCH2—, —NHCO—, —NHCOCH2—, -HET- and -HET-CH2— {wherein HET is 5- to 6-membered heterocyclyl or heteroaryl containing one ore more N, S or O atoms}; and
is null, amino substituted C1-8 alkyl, or a ring selected from the group consisting of 3- to 10-membered cycloalkyl, 4- to 10-membered heterocycloalkyl, 6- to 10-membered aryl and 5- to 10-membered heteroaryl.
In certain embodiment,
is selected from the group consisting of
and, and for example, is
In certain embodiment, is
wherein X1 is CH or N; X2 and X3 are each independently hydrogen, CH3 or CH2CH3.
In Formula L above,
may be
wherein:
is null or a ring selected from the group consisting of 3- to 10-membered cycloalkyl, 4- to 10-membered heterocycloalkyl, 6- to 10-membered aryl and 5- to 10-membered heteroaryl;
LINT1 and LINT2 are each independently selected from the group consisting of —CH2—, —NH—, —NCH3—, —O—, —S—, —SO—, —SO2—, —CO—, —CH2CH2O—, —OCH2CH2—, —CH2CH2S—, —SCH2CH2—, —COO—, —CONH— and —NHCO—; and
q and r are each independently an integer from 1 to 10.
In one embodiment,
is selected from the group consisting of
In one embodiment, Linker is a linker that is included in the compound selected from the group consisting of Compound 1 to 169.
In a certain embodiment of the present invention, the compound represented by Formula I is a compound that is selected from the group consisting of Compound 2-6, 8-12, 14-33, 36-38, 40-44 and 46-169.
In the present invention, a pharmaceutically acceptable salt refers to any organic or inorganic acid addition salt with a concentration that is relatively non-toxic, is harmless, and has effective action to patients, wherein side effects caused by this salt does not deteriorate beneficial efficacy of the compound represented by Formula I. For example, the pharmaceutically acceptable salt may be an inorganic acid such as hydrochloric acid, phosphoric acid, sulfuric acid, nitric acid, or the like, or an organic acid such as methanesulfonic acid, p-toluenesulfonic acid, acetic acid, trifluoroacetic acid, maleic acid, succinic acid, oxalic acid, benzoic acid, tartaric acid, fumaric acid, manderic acid, propionic acid, citric acid, lactic acid, glycolic acid, gluconic acid, galacturonic acid, glutamic acid, glutaric acid, glucuronic acid, aspartic acid, ascorbic acid, carbonic acid, vanillic acid or hydroiodic acid, but is not limited thereto.
Method for the Preparing the HMG-CoA Reductase Degradation Inducing Compounds
In the present invention, the compound represented by Formula I above, a stereoisomer thereof, or a pharmaceutically acceptable salt thereof may be prepared through reactions such as the following Reaction Schemes 1 to 3 by a synthetic method known in the field of organic chemistry or a modification technique apparent to those skilled in the art.
In the Reaction Schemes 1 to 3 above, PTM, Linker and ULM are a group defined in the above, or a suitable derivative thereof. RG1, RG2, RG2a, RG2b, RG3, RG3a, RG3b and RG4 are moieties including a suitable reactive group capable of linking together with an intermediate of the PROTAC compound represented by Formula I through formation of the covalent bond in the field of organic synthesis. The formation of the covalent bond may be achieved by synthetic reactions such as amide formation, ester formation, carbamate formation, urea formation, ether formation, amine formation, and single bonds, double bond formation between various carbons, click chemistry and the like, depending on specific reaction groups, but is not limited thereto.
Variations of each step in the above Reaction Scheme may include one or multiple synthesis steps. Isolation and purification of the product may be accomplished by standard procedures known to those skilled in the art of organic chemistry.
In one embodiment, the compounds of the present invention can be prepared through Reaction Scheme 1 by one or multiple synthetic steps.
In one example of Reaction Scheme 1, when ULM is Formula A-1, the compound of the present invention may be prepared through the following Reaction Scheme 1-A.
In one example of Reaction Scheme 1, when ULM is Formula B-1, the compound of the present invention may be prepared through the following Reaction Scheme 1-B.
In one example of Reaction Scheme 2, when ULM is Formula A-1, the compound of the present invention may be prepared through the following Reaction Scheme 2-A (see Examples 2-6, 31-38, 40-44, 46-105, 106-153 and 155-157).
In one example of Reaction Scheme 2, when ULM is Formula B-1, the compound of the present invention may be prepared through the following Reaction Scheme 2-B (see Examples 8-12, 14-30, 154, 158-169)
In one example of Reaction Scheme 3, when ULM is Formula A-1, the compound of the present invention may be prepared through the following Reaction Scheme 3-A.
In one example of Reaction Scheme 3, when ULM is Formula B-1, the compound of the present invention may be prepared through the following Reaction Scheme 3-B.
In the above schemes, RG1, RG2, and RG2a are each independently LPTM or any reaction precursor thereof, RG3, RG4 and RG3a are each independently LULM or any reaction precursor thereof, and RG1, RG2, RG2a, RG3, RG3a and RG4 may be appropriately selected according to the structure and linker position of the target compound.
In the above Reaction Scheme, each compound represented by PTM and ULM may be synthesized by a person skilled in the art with reference to documents known in the field of organic chemistry, descriptions of Examples of the present invention, and the like.
The present invention also provides the compounds represented by PTM-Linker-RG3 or PTM-Linker 1-RG2b that are the reaction intermediates of the compounds represented by Formula I.
Use of the HMG-CoA Reductase Degradation Inducing Compounds
Another embodiment of the present invention is a composition for inducing HMG-CoA reductase degradation comprising the compound represented by Formula I, stereoisomer, or a pharmaceutically acceptable salt thereof. Formula I is the same as defined above.
HMG-CoA reductase (3-hydroxy-3-methylglutaryl-CoA reductase) is an enzyme in an endoplasmic reticulum membrane and catalyzes conversion of HMG-CoA to mevalonate which is a rate-limiting step of intracellular cholesterol biosynthesis.
In Experimental Examples of the present invention, it was confirmed that the compound according to the present invention effectively induced the degradation of HMG-CoA reductase in a hepatocyte model. Surprisingly, it was confirmed that the compound of the present invention had remarkably excellent degradability of HMG-CoA reductase in hepatocytes as compared to the atorvastatin-based PROTAC compound described in WO 2019/109415 A1 (see FIGS. 1 to 10). Accordingly, the composition comprising the compound represented by Formula I of the present invention may be effectively employed for inducing degradation of HMG-CoA reductase.
An embodiment of the present invention is a composition for preventing or treating HMG-CoA reductase-related diseases comprising a compound represented by Formula I, a stereoisomer or a pharmaceutically acceptable salt thereof. An another embodiment of the present invention is a method for prevention or treatment of HMG-CoA reductase-related diseases by administering a therapeutically effective amount of compound represented by Formula I, a stereoisomer or a pharmaceutically acceptable salt thereof into a patient. Formula I is the same as defined above.
In the present invention, the HMGCR-related disease refers to any disease or condition capable of being treated, alleviated, delayed, inhibited or prevented from induction of degradation or inhibition of activity of HMGCR. In an embodiment, the HMG-CoA reductase-related disease may be cardiovascular disease or hyperlipidemia. The cardiovascular disease may include, for example, myocardial infarction, stroke, angina, heart failure, atherosclerosis, or arteriosclerosis, and the hyperlipidemia may include, for example, primary hypercholesterolemia (family and non-family), mixed dyslipidemia, primary dysbetalipoproteinemia, or hypertriglyceridemia. However, examples thereof are not limited thereto.
It was confirmed from Experimental Examples of the present invention that the compound according to the present invention has an excellent effect of inducing protein degradation of HMG-CoA reductase. Therefore, the pharmaceutical composition comprising the compound represented by Formula I, a stereoisomer or a pharmaceutically acceptable salt thereof may be effectively employed for the prevention or treatment of HMG-CoA-related diseases.
The pharmaceutical composition of the present invention may further include one or more pharmaceutically acceptable carriers in addition to the compound represented by Formula I for administration. These formulations may be prepared by referring to conventional methods or literature (see Remington's Pharmaceutical Science, Mack Publishing Company, Easton Pa.) used for formulation in the art, and may be formulated into various formulations according to each disease or ingredient.
The pharmaceutical composition of the present invention may be administered orally or parenterally according to a desired method (e.g., intravenously, subcutaneously, intraperitoneally or topically applied), and the dosage range may vary according to be the patient's weight, age, sex, and health status, diet, administration time, administration method, excretion rate, and the severity of the disease, etc.
The pharmaceutical composition of the present invention may further include one or more active ingredients exhibiting the same or similar medicinal effects in addition to the compound represented by Formula I above, or the pharmaceutically acceptable salt thereof.
An embodiment of the present invention is a method of degrading HMG-CoA reductase by administering a compound represented by Formula I, a stereoisomer or a pharmaceutically acceptable salt thereof to mammals including humans.
Another embodiment of the present invention is a method of degrading HMG-CoA reductase by administering the compound represented by Formula I, a stereoisomer or a pharmaceutically acceptable salt thereof to a sample in vitro. The sample may be a cell, a cell culture, a body fluid or tissue of a mammal including a human, but is not limited thereto.
The compound of the present invention exhibits an effect of inducing HMG-CoA reductase degradation. Therefore, the pharmaceutical compound of the present invention may be effectively utilized for preventing or treating HMG-CoA reductase-related diseases.
Unless otherwise defined, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this disclosure belongs. The terminology used in the description is for describing particular embodiments only and is not intended to be limiting of the disclosure.
Examples 2 to 6, 8 to 12, 14 to 38, 40 to 44, 46 to 105 and 106 to 169 are examples for synthesis of Compounds 2 to 6, 8 to 12, 14 to 38, 40 to 44 and 46 to 105 and 106 to 169 which are HMGCR decomposition-inducing bifunctional compounds according to the present invention. Examples of 1, 7, 13, 39 and 45 are examples for synthesis of Compounds 1, 7, 13, 39 and 45, which are comparative compounds that lack the E3 ubiquitin ligase ligand. Comparative Examples 1 and 2 are examples for synthesis of Comparative Compounds 1 and 2 disclosed in WO2019/109415 A1.
The present invention provides synthetic methods for Compound 1 to 169 shown in the table below.
The compounds of the present invention were purified according to the following method and the structure was analyzed.
Instruments
LCMS: Shimadzu LCMS-2020
NMR: BRUKER AVANCE III 400 MHz, Bruker A V-600 600 Mhz
HPLC: Shimadzu LC-20AB, Shimadzu LC-20AD, Agilent 1100 LC, Agilent 1200 LC, Agilent 1290 LC
SFC: SHIMADZU LC-30ADsf
LCSM Analysis
LCMS data were recorded with Shimadzu LCMS-2020 equipped with an electron spray ionization device. 0.0375% TFA in water (solvent A) and 0.01875% TFA in acetonitrile (solvent B) were used as mobile phases. As a column, Kinetex EVO C18 (2.1*30) mm, 5 μm was used.
HPLC Analysis
In HPLC analysis, Shimadzu LC-20AB, Shimadzu LC-20AD, Agilent 1100 LC, Agilent 1200 LC or Agilent 1290 LC was used. 0.0375% TFA in water (solvent A) and 0.01875% TFA in acetonitrile (solvent B) or 0.025% NH3.H2O in water (solvent A) and acetonitrile (Solvent B) was used as the mobile phase. As a column, XBridge C18 (2.1*50) mm, 5 μm or Kinetex C18 LC column (4.6*50) mm, 5 μm or Eclipse plus C18 (4.6*150) mm, 3.5 μm or Waters XBridge® C18 (4.6*150) mm, 3.5 m was used.
NMR Analysis
1H NMR spectrum was recorded with Bruker AVANCE III 400 MHz/5 mm Probe (BBO) and Bruker A V-600 600 Mhz.
SFC Analysis
In SFC analysis, SHIMADZU LC-30ADsf was used, and C02 (solvent A) and 0.05% DEA in isopropanol (solvent B) or 0.05% DEA in methanol (solvent B) or 0.05% DEA in ethanol (solvent B) or 0.05% DEA in isopropanol:acetonitrile (1:1) (solvent B) was used as the mobile phase. Columns were Cellucoat 50×4.6 mm, 3 μm or Chiralcel OD-3 50×4.6 mm, 3 μm or Chiralcel OJ-3 50×4.6 mm, 3 μm or Chiralpak AD-3 50×4.6 mm, 3 μm or Chiralpak AS-3 50×4.6 mm, 3 μm or Chiralpak IG-3 50×4.6 mm, 3 μm or (S,S)Whelk-01 100×4.6 mm, 3.5 μm Chiralcel OD-3 50×4.6 mm, 3 μm or Chiralcel OJ-3 50×4.6 mm, 3 μm or Chiralpak AD-3 50×4.6 mm, 3 μm or Chiralpak AS-3 50×4.6 mm, 3 μm.
To a mixture of 3,3-dimethyltetrahydropyran-2,6-dione (10 g, 70.35 mmol) and prop-2-en-1-ol (4.09 g, 70.35 mmol, 4.78 mL) in 2,6-di-tert-butylpyridine (40 mL) was added DMAP (866.67 mg, 7.09 mmol). The mixture was stirred at 25° C. for 15 h. TLC (Petroleum ether:Ethyl acetate=2:1) showed two new spots were formed. The mixture was added to water (100 mL), the aqueous phase was extracted with EtOAc (50 mL×3). The combined organic layer was concentrated under vacuum. The residue was purified by silica gel column chromatography (Petroleum ether:Ethyl acetate=1:0 to 2:1) to afford 5-(allyloxy)-2,2-dimethyl-5-oxopentanoic acid (10 g, 49.94 mmol, 70.99% yield) and 5-(allyloxy)-2,2-dimethyl-5-oxopentanoic acid (2 g, crude) was obtained as colorless oil.
1H NMR (400 MHz, CDCl3) δ 5.84-6.01 (m, 1H), 5.29-5.37 (m, 1H), 5.25 (dd, J=1.16, 10.45 Hz, 1H), 4.58 (d, J=5.75 Hz, 2H), 2.33-2.46 (m, 2H), 1.88-2.00 (m, 2H), 1.23 (s, 6H)
To a solution of 5-allyloxy-2,2-dimethyl-5-oxo-pentanoic acid (2 g, 9.99 mmol), (4R,6R)-6-[2-[(1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl]ethyl]-4-[tert-butyl(dimethyl)silyl]oxy-tetrahydropyran-2-one (1.45 g, 3.33 mmol) and DMAP (1.45 g, 11.85 mmol) in DCM (30 mL) was added and DCC (2.03 g, 9.82 mmol, 1.99 mL) and the resulting mixture was stirred at 25° C. for 15 h. TLC (Petroleum ether:Ethyl acetate=2:1) showed desired spot was formed and the starting material remained. The mixture was filtered. The filtrate was concentrated under vacuum. The residue was purified by reversed-phase HPLC (neutral, 100% ACN) to afford 5-allyl 1-((1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl) 2,2-dimethylpentanedioate (1.5 g, 2.43 mmol, 36.51% yield) as yellow oil.
1H NMR (400 MHz, CDCl3) δ 6.01 (s, 1H), 5.94-5.84 (m, 1H), 5.79 (dd, J=6.11, 9.66 Hz, 1H), 5.53 (s, 1H), 5.36 (d, J=2.57 Hz, 1H), 5.32-5.27 (m, 1H), 5.23-5.20 (m, 1H), 4.64-4.56 (m, 1H), 4.56-4.54 (m, 2H), 4.32-4.28 (m, 1H), 2.56-2.61 (m, 2H), 2.48-2.34 (m, 2H), 2.32-2.16 (m, 3H), 2.03-1.97 (m, 4H), 1.93-1.80 (m, 5H), 1.74-1.63 (m, 2H), 1.54-1.44 (m, 1H), 1.35 (t, J=7.89 Hz, 2H), 1.19 (d, J=3.91 Hz, 5H), 1.06 (d, J=7.46 Hz, 3H), 0.92-0.88 (m, 12H), 0.09 (d, J=1.47 Hz, 6H).
To a solution of 5-allyl 1-((1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl) 2,2-dimethylpentanedioate (1.5 g, 2.43 mmol) and PPh3 (95.66 mg, 364.73 μmol) in DCM (20 mL) was added diethylammonium formate (2 M, 2.40 mL) followed by Pd(PPh3)4 (210.00 mg, 0.18 mmol) and the resulting mixture was stirred at 25° C. for 15 h. LCMS showed a peak with desired mass and starting material remained. The mixture was filtered, the filtrate was concentrated under vacuum. The residue was purified by reversed-phase HPLC (neutral, 89% ACN) to afford 5-(((1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl)oxy)-4,4-dimethyl-5-oxopentanoic acid (0.9 g, 1.56 mmol, 64.17% yield) as yellow oil. MS (M+H)+=577.2
A mixture of 5-(((1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl)oxy)-4,4-dimethyl-5-oxopentanoic acid (0.9 g, 1.56 mmol) in formic acid (24.40 g, 424.11 mmol, 20 mL, 80% purity) was stirred at 25° C. for 1 h. LCMS showed a main peak with desired mass. The mixture was concentrated under vacuum. The residue was purified by reversed-phase HPLC (neutral, 50% ACN) to afford
5-(((1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl)oxy)-4,4-dimethyl-5-oxopentanoic acid (0.28 g, 0.61 mmol, 38.80% yield) as white solid. MS (M+H)+=463.0
To a solution of 2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethanol (1 g, 5.17 mmol) and TEA (1.05 g, 10.35 mmol, 1.44 mL) in DCM (20 mL) was added CbzCl (971.08 mg, 5.69 mmol, 0.81 mL), the mixture was stirred at 25° C. for 2 h. LCMS showed a peak with desired mass. The mixture was concentrated under vacuum to give benzyl (2-(2-(2-(2-hydroxyethoxy)ethoxy) ethoxy)ethyl)carbamate (1.7 g, crude) as white solid, which was used for next step directly.
MS (M+H)+=328.0
To a solution of benzyl (2-(2-(2-(2-hydroxyethoxy)ethoxy)ethoxy)ethyl)carbamate (1.7 g, crude) and pyridine (821.51 mg, 10.39 mmol) in DCM (20 mL) was added p-TsCl (1.49 g, 7.79 mmol), the mixture was stirred at 25° C. for 16 h. LCMS showed a peak with desired mass. The mixture was concentrated under vacuum. The residue was purified by silica gel column chromatography (Petroleum ether/EtOAc=1/0 to 1/1) to afford 3-oxo-1-phenyl-2,7,10,13-tetraoxa-4-azapentadecan-15-yl 4-methylbenzenesulfonate (0.9 g, 1.87 mmol, 35.99% yield) as yellow oil. MS (M+H)+=482.2
To a mixture of 3-oxo-1-phenyl-2,7,10,13-tetraoxa-4-azapentadecan-15-yl 4-methylbenzenesulfonate (0.9 g, 1.87 mmol) and aniline (1.74 g, 18.69 mmol, 1.71 mL) in CH3CN (15 mL) was added Cs2CO3 (1.83 g, 5.61 mmol), the mixture was stirred at 90° C. for 15 h. LCMS showed a peak (50%) with desired mass. The mixture was filtered and the filtrate was concentrated under vacuum to give a residue. The residue was purified by reversed-phase HPLC (0.1% FA condition, 50% ACN) to afford benzyl (2-(2-(2-(2-(phenylamino)ethoxy)ethoxy)ethoxy) ethyl)carbamate (0.11 g, 0.27 mmol, 14.62% yield) as yellow oil. MS (M+H)+=403.2
To a solution of benzyl (2-(2-(2-(2-(phenylamino)ethoxy)ethoxy)ethoxy)ethyl)carbamate (0.11 g, 0.27 mmol) in MeOH (10 mL) was added Pd/C (0.05 g, 10% purity), the mixture was stirred at 40° C. for 16 h. LCMS showed a peak with desired and a little starting material remained. The mixture was filtered and the filtrate was concentrated under vacuum to give N-(2-(2-(2-(2-aminoethoxy)ethoxy)ethoxy)ethyl)aniline (60 mg, 0.22 mmol, 81.81% yield) as yellow oil, which was used directly in the next step. MS (M+H)+=269.3
To a solution of 5-[[(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-hydroxy-6-oxo-tetrahydropyran-2-yl] ethyl]-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl]oxy]-4,4-dimethyl-5-oxo-pentanoic acid (0.1 g, 0.21 mmol) and DIEA (55.88 mg, 0.43 mmol, 0.075. mL) in DMF (2 mL) was added HATU (0.1 g, 0.26 mmol), the mixture was stirred at 25° C. for 15 min, to the mixture was added N-[2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethyl]aniline (58.01 mg, 0.216 mmol), the mixture was stirred at 25° C. for 1 h. LCMS showed a peak (53%) with desired mass. The pH was adjusted to 7-8 with 50% FA, the mixture was filtered and the filtrate was collected. The filtrate was purified by prep-HPLC (column: Phenomenex luna C18 150*25 mm*10 μm; mobile phase: [water (0.1% TFA)-ACN]; B %: 37%-67%, 10 min) to give a crude product (HPLC: EW15926-241-P1C), The crude product was re-purified by prep-HPLC (column: UniSil 3-100 C18 Ultra (150*25 mm*3 μm); mobile phase: [water (0.225% FA)-ACN]; B %: 46%-76%, 10 min) followed by lyophilization to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl 16,16-dimethyl-13-oxo-1-(phenylamino)-3,6,9-trioxa-12-azaheptadecan-17-oate (12.8 mg, 0.017 mmol, 8.06% yield, 97% purity) as yellow oil. MS (M+H)+=713.2
1H NMR (400 MHz, DMSO-d6) δ 7.47 (t, J=5.6 Hz, 1H), 7.05 (dd, J=8.5, 7.2 Hz, 2H), 6.60-6.54 (m, 2H), 6.51 (t, J=7.2 Hz, 1H), 5.94 (d, J=9.6 Hz, 1H), 5.77 (dd, J=9.6, 6.0 Hz, 1H), 5.51-5.42 (m, 2H), 5.18 (d, J=3.4 Hz, 2H), 4.55-4.43 (m, 1H), 4.14-4.06 (m, 1H), 3.57-3.51 (m, 6H), 3.51-3.45 (m, 4H), 3.36 (d, J=6.4 Hz, 2H), 3.20-3.13 (m, 4H), 2.61 (dd, J=17.3, 4.5 Hz, 1H), 2.42-2.40 (m, 1H), 2.38-2.34 (m, 2H), 2.27 (d, J=12.5 Hz, 1H), 2.22-2.11 (m, 1H), 2.09-1.97 (m, 1H), 1.94-1.75 (m, 3H), 1.72-1.57 (m, 5H), 1.41-1.27 (m, 2H), 1.27-1.20 (m, 1H), 1.03 (d, J=5.3 Hz, 6H), 0.99 (d, J=7.3 Hz, 3H), 0.83 (d, J=6.9 Hz, 3H).
To a solution of 2-(2,6-dioxo-3-piperidyl)-4-fluoro-isoindoline-1,3-dione (1 g, 3.62 mmol, 1 eq) and tert-butyl N-[2-[2-(2-aminoethoxy)ethoxy]ethyl]carbamate (0.9 g, 3.62 mmol) in DMSO (10 mL) was added DIEA (935.80 mg, 7.24 mmol, 1.26 mL), the mixture was stirred at 90° C. for 16 h. LCMS showed a main peak with desired mass. The pH was adjusted to 7-8 by 1N HCl, the mixture was filtered and the filtrate was purified directly by reversed-phase HPLC (0.1% FA condition, 65% ACN) to afford tert-butyl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (1.3 g, 2.58 mmol, 71.17% yield) as black oil.
To a solution of tert-butyl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (1.3 g, 2.58 mmol) in dioxane (5 mL) was added HCl/dioxane (4 M, 15 mL) and the resulting mixture was stirred at 25° C. for 3 h. LCMS showed a main peak with desired mass. The mixture was concentrated under vacuum to give 4-((2-(2-(2-aminoethoxy)ethoxy)ethyl)amino)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (1.2 g, crude, HCl salt) as brown oil, which was used directly in the next step. MS (M+H)+=405.3
To a solution of 5-[[(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-hydroxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl]oxy]-4,4-dimethyl-5-oxo-pentanoic acid (0.12 g, 0.26 mmol) and DIEA (74.20 mg, 0.57 mmol, 0.1 mL) in DMF (2 mL) was added HATU (0.12 g, 315.60 μmol) at 25° C., the resulting mixture was stirred at 25° C. for 0.5 h. To the mixture was added 4-[2-[2-(2-aminoethoxy)ethoxy]ethylamino]-2-(2,6-dioxo-3-piperidyl) isoindoline-1,3-dione (0.12 g, 272.18 μmol, HCl), the resulting mixture was stirred at 25° C. for 2.5 h. LCMS showed a peak with desired mass. The pH was adjusted 7-8 with 1 N HCl, the mixture was filtered, the filtrated was purified directly by prep-HPLC (column: UniSil 3-100 C18 Ultra (150*25 mm*3 μm); mobile phase: [water (0.225% FA)-ACN]; B %: 43%-73%, 10 min) followed by lyophilization to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl 5-((2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)amino)-2,2-dimethyl-5-oxopentanoate (98.7 mg, 0.10 mmol, 42.13% yield, 94% purity) as yellow solid. MS (M+H)+=849.3.
1H NMR (400 MHz, DMSO-d6) δ 11.09 (s, 1H), 7.58 (dd, J=7.4, 8.4 Hz, 1H), 7.45 (t, J=5.6 Hz, 1H), 7.14 (d, J=8.6 Hz, 1H), 7.04 (d, J=7.0 Hz, 1H), 6.60 (t, J=5.8 Hz, 1H), 5.93 (d, J=9.8 Hz, 1H), 5.76 (dd, J=6.0, 9.6 Hz, 1H), 5.47 (s, 1H), 5.18 (d, J=3.2 Hz, 2H), 5.05 (dd, J=5.4, 12.8 Hz, 1H), 4.53-4.43 (m, 1H), 4.10 (d, J=3.2 Hz, 1H), 3.63-3.58 (m, 2H), 3.56-3.51 (m, 2H), 3.51-3.43 (m, 4H), 3.34-3.39 (m, 2H), 3.17 (q, J=6.0 Hz, 2H), 2.94-2.82 (m, 1H), 2.64-2.52 (m, 3H), 2.40 (d, J=1.8 Hz, 1H), 2.38-2.30 (m, 2H), 2.30-2.23 (m, 1H), 2.22-2.12 (m, 1H), 2.06-1.98 (m, 2H), 1.93-1.74 (m, 3H), 1.71-1.56 (m, 5H), 1.39-1.20 (m, 3H), 1.02 (d, J=5.0 Hz, 6H), 0.98 (d, J=7.4 Hz, 3H), 0.83 (d, J=6.8 Hz, 3H).
In a manner similar to Step 1 of Example 2, the titled compound (0.78 g, 1.42 mmol, 41.57% yield) was obtained as a black oil.
In a manner similar to Step 2 of Example 2, the titled compound (0.7 g, crude, HCl) was obtained as a brown oil.
MS (M+H)+=449.0
In a manner similar to Step 3 of Example 2, the titled compound (22.0 mg, 23.28 μmol, 17.95% yield, 94.5% purity) was obtained as a yellow solid.
MS (M+H)+=893.3.
1H NMR (400 MHz, DMSO-d6) δ 11.08 (s, 1H), 7.58 (dd, J=8.6, 7.1 Hz, 1H), 7.46 (t, J=5.7 Hz, 1H), 7.14 (d, J=8.6 Hz, 1H), 7.04 (d, J=7.0 Hz, 1H), 6.60 (t, J=5.9 Hz, 1H), 5.93 (d, J=9.7 Hz, 1H), 5.76 (dd, J=9.6, 6.0 Hz, 1H), 5.48 (s, 1H), 5.18 (d, J=3.3 Hz, 2H), 5.05 (dd, J=12.9, 5.4 Hz, 1H), 4.54-4.40 (m, 1H), 4.10 (d, J=4.1 Hz, 1H), 3.62 (t, J=5.4 Hz, 2H), 3.58-3.54 (m, 2H), 3.54-3.51 (m, 2H), 3.50-3.43 (m, 6H), 3.16 (q, J=6.0 Hz, 2H), 2.95-2.82 (m, 1H), 2.65-2.52 (m, 4H), 2.42-2.34 (m, 3H), 2.27 (d, J=12.6 Hz, 2H), 2.23-2.10 (m, 1H), 2.10-1.98 (m, 2H), 1.94-1.74 (m, 3H), 1.74-1.56 (m, 5H), 1.42-1.19 (m, 3H), 1.03 (d, J=5.4 Hz, 6H), 0.98 (d, J=7.3 Hz, 3H), 0.83 (d, J=6.9 Hz, 3H).
In a manner similar to Step 1 of Example 2, the titled compound (1 g, 1.69 mmol, 18.92% yield) was obtained as a brown oil.
In a manner similar to Step 2 of Example 2, the titled compound (0.3 g, 0.6 mmol, 36.10% yield) was obtained as a brown oil.
In a manner similar to Step 3 of Example 2, the titled compound (16.6 mg, 0.016 mmol, 7.76% yield, 94.7% purity) was obtained as a yellow solid.
MS (M+H)+=937.3
1H NMR (400 MHz, DMSO-d6) δ 11.09 (s, 1H), 7.62-7.55 (m, 1H), 7.46 (t, J=5.6 Hz, 1H), 7.15 (d, J=8.6 Hz, 1H), 7.04 (d, J=7.0 Hz, 1H), 6.60 (t, J=5.6 Hz, 1H), 5.93 (d, J=9.6 Hz, 1H), 5.77 (dd, J=5.8, 9.6 Hz, 1H), 5.48 (s, 1H), 5.18 (d, J=2.8 Hz, 2H), 5.05 (dd, J=5.4, 12.8 Hz, 1H), 4.48 (dd, J=7.6, 11.2 Hz, 1H), 4.10 (d, J=3.2 Hz, 1H), 3.64-3.59 (m, 2H), 3.58-3.51 (m, 4H), 3.50-3.43 (m, 8H), 3.37-3.34 (m, 4H), 3.16 (q, J=6.2 Hz, 2H), 2.94-2.82 (m, 1H), 2.65-2.54 (m, 2H), 2.42-2.30 (m, 4H), 2.26 (d, J=14.0 Hz, 1H), 2.22-2.12 (m, 1H), 2.07-1.98 (m, 2H), 1.93-1.74 (m, 3H), 1.71-1.55 (m, 5H), 1.40-1.21 (m, 3H), 1.08-1.01 (m, 6H), 0.98 (d, J=7.4 Hz, 3H), 0.83 (d, J=7.0 Hz, 3H).
In a manner similar to Step 1 of Example 2, the titled compound (0.4 g, 0.63 mmol, 23.90% yield) was obtained as a black oil.
In a manner similar to Step 2 of Example 2, the titled compound (0.4 g, crude, HCl) was obtained as a brown oil. MS (M+H)+=537.2
In a manner similar to Step 3 of Example 2, the titled compound (22.1 mg, 0.02 mmol, 13.84% yield, 94% purity) was obtained as a yellow solid.
MS (M+H)+=981.3
1H NMR (400 MHz, DMSO-d6) δ 11.1 (s, 1H), 7.58 (dd, J=7.2, 8.4 Hz, 1H), 7.47 (t, J=5.6 Hz, 1H), 7.15 (d, J=8.6 Hz, 1H), 7.04 (d, J=7.0 Hz, 1H), 6.60 (t, J=5.6 Hz, 1H), 5.93 (d, J=9.8 Hz, 1H), 5.77 (dd, J=5.8, 9.4 Hz, 1H), 5.48 (s, 1H), 5.18 (d, J=2.8 Hz, 2H), 5.05 (dd, J=5.2, 12.8 Hz, 1H), 4.53-4.42 (m, 1H), 4.10 (d, J=2.8 Hz, 1H), 3.64-3.59 (m, 2H), 3.58-3.51 (m, 4H), 3.51-3.44 (m, 14H), 3.37-3.34 (m, 2H), 3.16 (q, J=6.0 Hz, 2H), 2.96-2.82 (m, 1H), 2.64-2.52 (m, 2H), 2.42-2.30 (m, 4H), 2.27 (d, J=12.2 Hz, 1H), 2.22-2.11 (m, 1H), 2.07-1.97 (m, 2H), 1.93-1.74 (m, 3H), 1.71-1.56 (m, 5H), 1.41-1.19 (m, 3H), 1.03 (d, J=5.2 Hz, 6H), 0.99 (d, J=7.4 Hz, 3H), 0.83 (d, J=6.8 Hz, 3H).
In a manner similar to Step 1 of Example 2, the titled compound (0.8 g, 0.93 mmol, 39.46% yield, 79% purity) was obtained as a brown oil.
In a manner similar to Step 2 of Example 2, the titled compound (0.8 g, crude, HCl) was obtained as a brown oil.
MS (M+H)+=581.2.
In a manner similar to Step 3 of Example 2, the titled compound (40.4 mg, 0.034 mmol, 16.15% yield, 88.6% purity) was obtained as a yellow solid.
MS (M+H)+=1025.4
1H NMR (400 MHz, DMSO-d6) δ 11.10 (s, 1H), 7.59 (dd, J=8.6, 7.1 Hz, 1H), 7.49 (t, J=5.6 Hz, 1H), 7.15 (d, J=8.6 Hz, 1H), 7.05 (d, J=7.0 Hz, 1H), 6.61 (t, J=5.8 Hz, 1H), 5.94 (d, J=9.7 Hz, 1H), 5.78 (dd, J=9.6, 5.9 Hz, 1H), 5.49 (d, J=4.5 Hz, 1H), 5.25-5.13 (m, 2H), 5.06 (dd, J=12.9, 5.4 Hz, 1H), 4.57-4.42 (m, 1H), 4.11 (s, 1H), 3.63 (t, J=5.4 Hz, 2H), 3.59-3.55 (m, 2H), 3.55-3.52 (m, 2H), 3.52-3.44 (m, 18H), 3.17 (q, J=6.0 Hz, 2H), 2.95-2.83 (m, 1H), 2.65-2.54 (m, 3H), 2.44-2.24 (m, 5H), 2.23-2.12 (m, 1H), 2.10-1.99 (m, 2H), 1.95-1.75 (m, 3H), 1.75-1.56 (m, 5H), 1.43-1.22 (m, 3H), 1.04 (d, J=5.4 Hz, 6H), 0.99 (d, J=7.4 Hz, 3H), 0.84 (d, J=7.0 Hz, 3H).
In a manner similar to Step 3 of Example 2, the titled compound (42.2 mg, 53.85 μmol, 35.59% yield, 92% purity) was obtained as a yellow oil.
MS (M+H)+=721.3
1H NMR (400 MHz, DMSO-d6) δ 7.52-7.41 (m, 2H), 5.94 (d, J=9.5 Hz, 1H), 5.78 (dd, J=6.0, 9.6 Hz, 1H), 5.49 (s, 1H), 5.18 (d, J=3.2 Hz, 2H), 4.55-4.48 (m, 1H), 4.10 (d, J=3.3 Hz, 1H), 3.90 (s, 2H), 3.60-3.54 (m, 4H), 3.53-3.46 (m, 4H), 3.39-3.33 (m, 2H), 3.17 (q, J=6.0 Hz, 2H), 2.94 (d, J=6.5 Hz, 2H), 2.61 (dd, J=4.5, 17.2 Hz, 1H), 2.43-2.31 (m, 4H), 2.28 (d, J=12.1 Hz, 1H), 2.22-2.13 (m, 1H), 2.07-1.99 (m, 1H), 1.94-1.74 (m, 3H), 1.73-1.56 (m, 5H), 1.41-1.22 (m, 3H), 1.03 (d, J=5.2 Hz, 6H), 0.99 (d, J=7.3 Hz, 3H), 0.84 (s, 12H).
To a mixture of 2-(2-((tert-butoxycarbonyl)amino)ethoxy)acetic acid (250.00 mg, 1.14 mmol) and DIEA (450.25 mg, 3.48 mmol, 0.6 mL, 3 eq) in DMF (6 mL) was added HATU (500.00 mg, 1.31 mmol), the mixture was stirred at 25° C. for 10 min, and then a solution of (2S,4R)-1-((S)-2-amino-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (0.5 g, 1.16 mmol, 1 eq) in DMF (2 mL) was added, the resulting mixture was stirred at 25° C. for 3 h. LCMS showed a peak (40%) with desired mass. The mixture was filtered and the filtrate was purified by reversed-phase HPLC (0.1% FA condition, 48% ACN) to give tert-butyl (2-(2-(((S)-1-((2S,4R)-4-hydroxy-2-((4-(4-methylthiazol-5-yl)benzyl)carbamoyl)pyrrolidin-1-yl)-3,3-dimethyl-1-oxobutan-2-yl)amino)-2-oxoethoxy)ethyl)carbamate (0.5 g, 0.79 mmol, 34.08% yield) as brown oil. MS (M+H)+=632.3
A mixture of tert-butyl (2-(2-(((S)-1-((2S,4R)-4-hydroxy-2-((4-(4-methylthiazol-5-yl)benzyl) carbamoyl)pyrrolidin-1-yl)-3,3-dimethyl-1-oxobutan-2-yl)amino)-2-oxoethoxy)ethyl)carbamate (0.5 g, 0.79 mmol) in HCl/dioxane (4 M, 20 mL) was stirred at 25° C. for 3 h. LCMS showed a main peak with desired mass. The mixture was concentrated under vacuum to give (2S,4R)-1-((S)-2-(2-(2-aminoethoxy)acetamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (0.4 g, 0.7 mmol, 88.96% yield, HCl) as yellow solid which was used directly in the next step. MS (M+H)+=532.5
To a solution of 5-[[(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-hydroxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl]oxy]-4,4-dimethyl-5-oxo-pentanoic acid (60 mg, 0.129 mmol), DIPEA (33.53 mg, 0.259 mmol, 45.19 μL) in DMF (2 mL) was added HATU (59.18 mg, 0.155 mmol) and the resulting mixture was stirred at 25° C. for 10 min. Then (2S,4R)-1-((S)-2-(2-(2-aminoethoxy)acetamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (75 mg, 0.13 mmol, HCl salt) was added, the mixture was stirred at 25° C. for 1 h. LCMS showed a peak (42%) with desired mass. The pH was adjusted to 7-8 with 50% formic acid and filtered. The filtrate was purified by prep-HPLC (column: UniSil 3-100 C18 Ultra (150*25 mm*3 μm); mobile phase: [water (0.225% FA)-ACN]; B %: 45%-75%, 10 min) followed by lyophilization to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl 5-((2-(2-(((S)-1-((2S,4R)-4-hydroxy-2-((4-(4-methylthiazol-5-yl)benzyl)carbamoyl)pyrrolidin-1-yl)-3,3-dimethyl-1-oxobutan-2-yl)amino)-2-oxoethoxy)ethyl)amino)-2,2-dimethyl-5-oxopentanoate (10.2 mg, 0.097 mmol, 7.51% yield, 93.2% purity) as white solid. MS (M+H)+=976.3
1H NMR (400 MHz, DMSO-d6) δ 8.98 (s, 1H), 8.58 (t, J=5.9 Hz, 1H), 7.58 (t, J=5.5 Hz, 1H), 7.44 (d, J=9.5 Hz, 1H), 7.40 (s, 4H), 5.93 (d, J=9.6 Hz, 1H), 5.81-5.73 (m, 1H), 5.48 (s, 1H), 5.18 (d, J=3.4 Hz, 2H), 5.14 (d, J=3.6 Hz, 1H), 4.56 (d, J=9.5 Hz, 1H), 4.52-4.33 (m, 4H), 4.25 (dd, J=15.8, 5.6 Hz, 1H), 4.15-4.07 (m, 1H), 3.93 (d, J=2.0 Hz, 2H), 3.70-3.57 (m, 2H), 3.46 (t, J=6.0 Hz, 2H), 3.26-3.18 (m, 2H), 2.61 (dd, J=17.3, 4.5 Hz, 1H), 2.44 (s, 3H), 2.41-2.34 (m, 3H), 2.30-2.23 (m, 1H), 2.23-2.12 (m, 1H), 2.09-2.00 (m, 2H), 1.94-1.86 (m, 2H), 1.85-1.74 (m, 2H), 1.71-1.56 (m, 5H), 1.42-1.21 (m, 3H), 1.04 (d, J=4.8 Hz, 6H), 0.98 (d, J=7.2 Hz, 3H), 0.94 (s, 9H), 0.83 (d, J=6.9 Hz, 3H).
In a manner similar to Step 1 of Example 8, the titled compound (0.6 g, 0.89 mmol, 54.61% yield) was obtained as a brown oil.
In a manner similar to Step 2 of Example 8, the titled compound (0.5 g, 0.82 mmol, 92.00% yield, HCl salt) was obtained as a yellow solid.
In a manner similar to Step 3 of Example 8, the titled compound (11.2 mg, 0.1 mmol, 7.68% yield, 90.7% purity) was obtained as a white solid.
MS (M+H)+=1020.4
1H NMR (400 MHz, DMSO-d6) δ 8.98 (s, 1H), 8.58 (t, J=5.9 Hz, 1H), 7.57-7.35 (m, 6H), 5.94 (d, J=9.7 Hz, 1H), 5.83-5.73 (m, 1H), 5.49 (s, 1H), 5.18 (dd, J=11.3, 3.5 Hz, 3H), 4.58 (d, J=9.6 Hz, 1H), 4.53-4.39 (m, 2H), 4.39-4.34 (m, 1H), 4.31-4.21 (m, 1H), 4.14-4.06 (m, 1H), 3.96 (s, 2H), 3.72-3.65 (m, 1H), 3.63-3.58 (m, 2H), 3.53 (d, J=5.1 Hz, 2H), 3.43-3.38 (m, 2H), 3.30-3.27 (m, 1H), 3.23-3.17 (m, 2H), 2.69-2.66 (m, 1H), 2.62 (dd, J=17.3, 4.6 Hz, 1H), 2.45 (s, 3H), 2.42-2.38 (m, 1H), 2.38-2.36 (m, 1H), 2.36-2.31 (m, 2H), 2.27 (d, J=13.2 Hz, 1H), 2.22-2.12 (m, 1H), 2.10-1.99 (m, 2H), 1.95-1.86 (m, 2H), 1.86-1.76 (m, 2H), 1.72-1.57 (m, 5H), 1.42-1.21 (m, 3H), 1.03 (d, J=5.5 Hz, 6H), 0.99 (d, J=7.3 Hz, 3H), 0.95 (s, 9H), 0.84 (d, J=6.9 Hz, 3H).
In a manner similar to Step 1 of Example 8, the titled compound (0.7 g, 0.97 mmol, 59.81% yield) was obtained as a brown oil.
MS (M+H)+=720.4
In a manner similar to Step 2 of Example 8, the titled compound (0.6 g, 0.91 mmol, 94.03% yield, HCl) was obtained as a yellow solid.
In a manner similar to Step 3 of Example 8, the titled compound (11.6 mg, 0.00985 mmol, 9.12% yield, 90.4% purity) was obtained as a white solid.
MS (M+H)+=1064.4
1H NMR (400 MHz, DMSO-d6) δ 8.99 (s, 1H), 8.59 (t, J=6.0 Hz, 1H), 7.49-7.43 (m, 2H), 7.40 (s, 4H), 5.94 (d, J=9.7 Hz, 1H), 5.83-5.74 (m, 1H), 5.49 (s, 1H), 5.18 (d, J=3.5 Hz, 2H), 5.15 (d, J=3.6 Hz, 1H), 4.57 (d, J=9.5 Hz, 1H), 4.47-4.33 (m, 3H), 4.26 (dd, J=15.7, 5.6 Hz, 1H), 4.14-4.07 (m, 1H), 3.97 (s, 2H), 3.71-3.65 (m, 1H), 3.61 (d, J=5.6 Hz, 3H), 3.59-3.51 (m, 4H), 3.49 (d, J=4.2 Hz, 2H), 3.21-3.13 (m, 2H), 2.62 (dd, J=17.2, 4.5 Hz, 1H), 2.45 (s, 3H), 2.42-2.40 (m, 1H), 2.38-2.37 (m, 1H), 2.31-2.24 (m, 2H), 2.23-2.11 (m, 1H), 2.11-1.97 (m, 1H), 1.97-1.75 (m, 3H), 1.74-1.57 (m, 5H), 1.39-1.23 (m, 3H), 1.03 (d, J=5.7 Hz, 6H), 0.99 (d, J=7.3 Hz, 3H), 0.95 (s, 9H), 0.84 (d, J=6.9 Hz, 3H).
In a manner similar to Step 1 of Example 8, the titled compound (0.45 g, 0.59 mmol, 36.14% yield) was obtained as a brown oil.
MS (M+H)+=764.2
In a manner similar to Step 2 of Example 8, the titled compound (0.4 g, 0.57 mmol, 96.97% yield, HCl) was obtained as a yellow oil.
MS (M+H)+=664.2
In a manner similar to Step 3 of Example 8, the titled compound (17 mg, 0.014 mmol, 13.31% yield, 93.8% purity) was obtained as a white solid.
MS (M+H)+=1108.4
1H NMR (400 MHz, DMSO-d6) δ 8.98 (s, 1H), 8.59 (t, J=5.87 Hz, 1H), 7.48-7.35 (m, 6H), 5.93 (d, J=9.54 Hz, 1H), 5.81-5.73 (m, 1H), 5.48 (s, 1H), 5.16 (dd, J=3.36, 13.02 Hz, 3H), 4.56 (d, J=9.66 Hz, 1H), 4.51-4.40 (m, 3H), 4.39-4.32 (m, 2H), 4.29-4.21 (m, 1H), 4.10-4.05 (m, 1H), 3.96 (s, 2H), 3.70-3.63 (m, 1H), 3.63-3.49 (m, 16H), 3.19-3.13 (m, 2H), 2.65-2.57 (m, 1H), 2.46-2.43 (m, 3H), 2.30-2.42 (m, 2H), 2.30-2.13 (m, 1H), 2.09-1.99 (m, 1H), 1.95-1.74 (m, 4H), 1.71-1.56 (m, 5H), 1.40-1.14 (m, 3H), 1.03 (d, J=5.75 Hz, 6H), 0.98 (d, J=7.34 Hz, 3H), 0.96-0.92 (m, 9H), 0.83 (d, J=6.97 Hz, 3H).
To a solution of 1-(9H-fluoren-9-yl)-3-oxo-2,7,10,13,16,19-hexaoxa-4-azahenicosan-21-oic acid (0.35 g, 0.67 mmol, 1 eq) and DIEA (104.88 mg, 0.81 mmol, 0.14 mL) in DMF (5 mL) was added (2S,4R)-1-((S)-2-amino-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (208.33 mg, 0.74 mmol) at 0° C., the mixture was stirred at 0-25° C. for 30 min, and then (2S,4R)-1-((S)-2-amino-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (291.16 mg, 0.67 mmol) was added, the resulting mixture was stirred at 25° C. for 1 h. LCMS showed a peak with desired mass. The mixture was filtered, the filtrate was purified by reversed-phase HPLC (0.1% FA condition, 70% ACN) to afford (9H-fluoren-9-yl)methyl ((S)-19-((2S,4R)-4-hydroxy-2-((4-(4-methylthiazol-5-yl)benzyl)carbamoyl)pyrrolidine-1-carbonyl)-20,20-dimethyl-17-oxo-3,6,9,12,15-pentaoxa-18-azahenicosyl)carbamate (0.8 g, 0.86 mmol, 63.59% yield) as brown oil.
MS (M+H)+=930.2
To a solution of (9H-fluoren-9-yl)methyl ((S)-19-((2S,4R)-4-hydroxy-2-((4-(4-methylthiazol-5-yl) benzyl)carbamoyl)pyrrolidine-1-carbonyl)-20,20-dimethyl-17-oxo-3,6,9,12,15-pentaoxa-18-azahenicosyl)carbamat (0.8 g, 0.86 mmol) in DMF (8 mL) was added piperidine (1.72 g, 20.25 mmol, 2 mL), the resulting mixture was stirred at 25° C. for 1 h. LCMS showed a peak with desired mass. The pH was adjusted to 8-9 by 1 N HCl, the mixture was extracted with EA (20 mL×3), the aqueous phase was concentrated under high vacuum, The solution was purified directly by reversed-phase HPLC (0.1% NH3.H2O) followed by lyophilization to afford (2S,4R)-1-((S)-20-amino-2-(tert-butyl)-4-oxo-6,9,12,15,18-pentaoxa-3-azaicosan-1-oyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (0.4 g, 0.565 mmol, 65.70% yield) as yellow oil.
MS (M+H)+=708.3
In a manner similar to Step 3 of Example 8, the titled compound (70.5 mg, 0.054 mmol, 41.98% yield, 89% purity) was obtained as a white solid.
MS (M+H)+=1152.4
1H NMR (400 MHz, DMSO-d6) δ 8.98 (s, 1H), 8.59 (t, J=6.0 Hz, 1H), 7.49-7.38 (m, 6H), 5.93 (d, J=9.6 Hz, 1H), 5.81-5.73 (m, 1H), 5.48 (s, 1H), 5.16 (dd, J=13.1, 3.5 Hz, 3H), 4.56 (d, J=9.5 Hz, 1H), 4.52-4.33 (m, 4H), 4.25 (dd, J=15.8, 5.6 Hz, 1H), 4.13-4.05 (m, 1H), 3.96 (s, 2H), 3.69-3.64 (m, 1H), 3.63-3.59 (m, 3H), 3.59-3.56 (m, 2H), 3.56-3.52 (m, 2H), 3.52-3.49 (m, 2H), 3.46 (d, J=5.5 Hz, 8H), 3.36-3.34 (m, 2H), 3.16 (q, J=6.0 Hz, 2H), 2.61 (dd, J=17.2, 4.5 Hz, 1H), 2.44 (s, 3H), 2.41-2.39 (m, 1H), 2.37-2.35 (m, 1H), 2.27 (d, J=12.9 Hz, 2H), 2.22-2.13 (m, 1H), 2.08-1.99 (m, 2H), 1.93-1.87 (m, 2H), 1.85-1.82 (m, 1H), 1.81-1.78 (m, 1H), 1.78-1.74 (m, 1H), 1.71-1.56 (m, 5H), 1.42-1.21 (m, 3H), 1.03 (d, J=5.4 Hz, 6H), 0.99 (d, J=7.3 Hz, 3H), 0.94 (s, 9H), 0.83 (d, J=6.9 Hz, 3H).
To a solution of [(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-hydroxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3,7-dimethyl-1,2,3,7,8,8ahexahydronaphthalen-1-yl] (2S)-2-methylbutanoate (10 g, 24.72 mmol) in MeOH (60 mL) H2O (10 mL) was added KOH (13.87 g, 247.19 mmol) and the reaction mixture was heated at 100° C. for 12 h. TLC showed the reaction was completed. The reaction mixture was cooled to rt, water (50 mL) was added. The mixture was concentrated under reduced pressure. The residue was dissolved in DCM (100 mL) and adjusted by 5 M HCl to pH=2. The resulting material was stirred for 4 h. Then the organic layer was separated, washed brine (50 mL) and dried over Na2SO4, filtered. The filtrate was concentrated under reduced pressure to give (4R,6R)-4-hydroxy-6-(2-((1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)ethyl)tetrahydro-2H-pyran-2-one (9.6 g, crude) as yellow solid, which was used for next step without purification.
To a solution of (4R,6R)-4-hydroxy-6-(2-((1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)ethyl)tetrahydro-2H-pyran-2-one (9.6 g, 29.96 mmol) in DCM (100 mL) was added TBSCl (6.77 g, 44.94 mmol, 5.51 mL) and Imidazole (4.08 g, 59.92 mmol). The reaction mixture was stirred for 12 h at 20° C. TLC showed the reaction was completed. The reaction mixture was quenched with water (100 mL), extracted with DCM (300 mL). The organic layer washed with brine (100 mL), dried over Na2SO4, filtered and the filtrate was concentrated under reduced pressure. The residue was purified by silica gel column (PE/EtOAc=30/1 to 5/1) to give (4R,6R)-4-((tert-butyldimethylsilyl)oxy)-6-(2-((1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)ethyl)tetrahydro-2H-pyran-2-one (5.9 g, 13.57 mmol, 45.30% yield) as white solid.
To a mixture of (4R,6R)-4-((tert-butyldimethylsilyl)oxy)-6-(2-((1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)ethyl)tetrahydro-2H-pyran-2-one (5.00 g, 11.50 mmol) and DMAP (10.00 g, 81.85 mmol) in pyridine (80 mL) was added (4-nitrophenyl) carbonochloridate (16.23 g, 80.52 mmol) and the resulting mixture was stirred at 25° C. for 16 h. LCMS showed a peak with desired mass and the starting material was consumed. The mixture was poured into water (100 mL) and extracted with EtOAc (100 mL×3), the organic phase was washed with 1N HCL (100 mL×3), brine (100 mL×2) and concentrated under vacuum. The residue was purified by silica gel column chromatography (PE:EtOAc=10:1 to 4:1) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (1.3 g, 2.17 mmol, 18.84% yield) as white solid and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (9 g, 7.20 mmol, 62.62% yield, 48% purity) as white solid.
1H NMR (400 MHz, DMSO-d6) δ 8.26-8.32 (m, 2H), 7.47-7.54 (m, 2H), 5.97 (d, J=9.66 Hz, 1H), 5.81 (dd, J=6.05, 9.60 Hz, 1H), 5.54 (br d, J=2.45 Hz, 1H), 5.25 (br d, J=2.81 Hz, 1H), 4.50-4.62 (m, 1H), 4.28 (t, J=3.30 Hz, 1H), 2.69 (dd, J=4.16, 17.24 Hz, 1H), 2.32-2.48 (m, 4H), 2.04 (br d, J=2.93 Hz, 2H), 1.67-1.84 (m, 4H), 1.45-1.64 (m, 2H), 1.28-1.40 (m, 1H), 1.11 (d, J=7.34 Hz, 3H), 0.82-0.91 (m, 3H), 0.77-0.80 (m, 9H), 0.01 (d, J=5.87 Hz, 6H)
To a solution of 2-(2-(2-(2-aminoethoxy)ethoxy)ethoxy)-N-neopentylacetamide (0.15 g, 384.23 μmol, TFA) and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl(4-nitrophenyl) carbonate (480.11 mg, 384.23 μmol) in pyridine (5 mL) was added DMAP (93.88 mg, 768.45 μmol), the resulting mixture was stirred at 25° C. for 20 h. LCMS showed a peak (22%) with desired mass. The mixture was concentrated under vacuum. The residue was purified by reversed-phase HPLC (0.1% FA condition, 93% ACN) to give (1S,3R,7S,8S,8aR)-8-(2-((2S,4S)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (14,14-dimethyl-11-oxo-3,6,9-trioxa-12-azapentadecyl)carbamate (0.17 g, 0.23 mmol, 60.03% yield) as light yellow oil.
MS (M+H)+=737.2
A mixture of (1S,3R,7S,8S,8aR)-8-(2-((2S,4S)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl(14,14-dimethyl-11-oxo-3,6,9-trioxa-12-azapentadecyl) carbamate (0.17 g, 0.231 mmol) in formic acid (12.20 g, 212.06 mmol, 10 mL, 80% purity) was stirred at 25° C. for 1 h. LCMS showed a peak (72%) with desired mass. The mixture was concentrated under vacuum. The residue was purified by prep-HPLC (column: Waters Xbridge 150*25 mm*5 μm; mobile phase: [water (10 mM NH4HCO3)-ACN]; B %: 38%-68%, 10 min) followed by lyophilization to give (1S,3R,7S,8S,8aR)-8-(2-((2S,4S)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (14,14-dimethyl-11-oxo-3,6,9-trioxa-12-azapentadecyl) carbamate (123.6 mg, 0.173 mmol, 75.20% yield, 87.4% purity) as light yellow oil.
MS (M+H)+=623.5
1H NMR (400 MHz, CDCl3) δ 6.92 (s, 1H), 5.97 (d, J=9.7 Hz, 1H), 5.78 (dd, J=9.7, 6.0 Hz, 1H), 5.51 (s, 1H), 5.30 (t, J=5.9 Hz, 1H), 5.21 (s, 1H), 4.64 (s, 1H), 4.31 (t, J=4.3 Hz, 1H), 4.03 (s, 2H), 3.67 (d, J=3.3 Hz, 4H), 3.64-3.59 (m, 4H), 3.57-3.47 (m, 2H), 3.35 (s, 2H), 3.08 (dd, J=6.5, 4.7 Hz, 2H), 2.75-2.58 (m, 2H), 2.45-2.34 (m, 2H), 2.25 (d, J=12.4 Hz, 1H), 2.09 (d, J=15.1 Hz, 1H), 1.96 (d, J=14.6 Hz, 1H), 1.90-1.81 (m, 2H), 1.80-1.67 (m, 6H), 1.07 (d, J=7.4 Hz, 3H), 0.94-0.88 (m, 12H).
To a solution of (2S,4R)-1-((S)-2-(2-(2-aminoethoxy)acetamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (0.2 g, 0.35 mmol, HCl) and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl(4-nitrophenyl)carbonate (439.88 mg, 0.35 mmol) in pyridine (2 mL) was added DMAP (215.04 mg, 1.76 mmol), the resulting mixture was stirred at 25° C. for 15 h. LCMS showed a peak (17.5%) with desired mass. The mixture was concentrated under vacuum. The residue was purified by reversed-phase HPLC (0.1% FA condition, 95% ACN) to give (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(((S)-1-((2S,4R)-4-hydroxy-2-((4-(4-methylthiazol-5-yl)benzyl)carbamoyl)pyrrolidin-1-yl)-3,3-dimethyl-1-oxobutan-2-yl)amino)-2-oxoethoxy)ethyl)carbamate (0.12 g, 0.12 mmol, 34.35% yield) as yellow solid. MS (M+H)+=992.7
A mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl) ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl(2-(2-(((S)-1-((2S,4R)-4-hydroxy-2-((4-(4-methylthiazol-5-yl)benzyl)carbamoyl)pyrrolidin-1-yl)-3,3-dimethyl-1-oxobutan-2-yl)amino)-2-oxoethoxy)ethyl)carbamate (0.12 g, 0.12 mmol) in formic acid (12.20 g, 212.06 mmol, 10 mL, 80% purity) was stirred at 25° C. for 1 h. LCMS showed a peak with desired mass. The mixture was concentrated under vacuum. The residue was purified by prep-HPLC (column: Phenomenex Synergi C18 150*30 mm*4 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 36%-66%, 10 min) followed by lyophilization to give (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(((S)-1-((2S,4R)-4-hydroxy-2-((4-(4-methylthiazol-5-yl)benzyl)carbamoyl)pyrrolidin-1-yl)-3,3-dimethyl-1-oxobutan-2-yl)amino)-2-oxoethoxy)ethyl)carbamate (34.1 mg, 0.037 mmol, 30.44% yield, 94.8% purity) as white solid.
MS (M+H)+=878.3
1H NMR (400 MHz, DMSO-d6) δ 8.99 (s, 1H), 8.58 (t, J=6.0 Hz, 1H), 7.45-7.39 (m, 5H), 7.14 (t, J=5.8 Hz, 1H), 5.90 (d, J=9.7 Hz, 1H), 5.76 (dd, J=9.4, 6.1 Hz, 1H), 5.46 (s, 1H), 5.17 (dd, J=9.8, 3.4 Hz, 2H), 5.08-5.01 (m, 1H), 4.56 (d, J=9.6 Hz, 1H), 4.52-4.34 (m, 4H), 4.26 (dd, J=15.8, 5.6 Hz, 1H), 4.14-4.07 (m, 1H), 3.93 (s, 2H), 3.69-3.58 (m, 2H), 3.47 (t, J=6.1 Hz, 2H), 3.16 (dd, J=11.2, 5.9 Hz, 2H), 2.68-2.59 (m, 1H), 2.45 (s, 3H), 2.38-2.30 (m, 3H), 2.26-2.21 (m, 1H), 2.09-2.03 (m, 1H), 1.94-1.79 (m, 4H), 1.71-1.57 (m, 3H), 1.52-1.43 (m, 1H), 1.37-1.25 (m, 2H), 1.04 (d, J=7.4 Hz, 3H), 0.95-0.92 (m, 9H), 0.84 (d, J=6.9 Hz, 3H).
In a manner similar to Step 1 of Example 14, the titled compound (0.15 g, 0.145 mmol, 35.44% yield, 97% purity) was obtained as a yellow solid.
MS (M+H)+=1036.5
1H NMR (400 MHz, DMSO-d6) δ 8.99 (s, 1H), 8.52 (d, J=5.9 Hz, 1H), 7.40 (s, 5H), 7.03 (t, J=5.7 Hz, 1H), 5.92 (d, J=9.7 Hz, 1H), 5.77 (dd, J=9.6, 5.9 Hz, 1H), 5.47 (s, 1H), 5.16 (d, J=3.5 Hz, 1H), 5.06 (s, 1H), 4.57 (d, J=9.6 Hz, 1H), 4.51-4.34 (m, 4H), 4.26 (dd, J=16.6, 6.4 Hz, 2H), 3.96 (s, 2H), 3.70-3.49 (m, 6H), 3.45-3.38 (m, 2H), 3.20-3.06 (m, 2H), 2.71-2.65 (m, 1H), 2.45 (s, 3H), 2.39-2.30 (m, 3H), 2.28-2.21 (m, 1H), 2.10-2.02 (m, 1H), 1.95-1.77 (m, 4H), 1.74-1.61 (m, 3H), 1.52-1.45 (m, 1H), 1.33-1.23 (m, 2H), 1.03 (d, J=7.2 Hz, 3H), 0.96-0.92 (m, 9H), 0.86-0.83 (m, 12H), 0.06 (d, J=0.8 Hz, 6H).
In a manner similar to Step 2 of Example 14, the titled compound (35.0 mg, 0.0366 mmol, 25.25% yield, 96.3% purity) was obtained as a white solid.
MS (M+H)+=922.2
1H NMR (400 MHz, DMSO-d6) δ 8.98 (s, 1H), 8.52 (t, J=6.1 Hz, 1H), 7.40 (s, 5H), 7.03 (t, J=5.8 Hz, 1H), 5.91 (d, J=9.6 Hz, 1H), 5.76 (dd, J=9.6, 5.9 Hz, 1H), 5.46 (t, J=3.2 Hz, 1H), 5.17 (dd, J=8.9, 3.3 Hz, 2H), 5.05 (d, J=3.4 Hz, 1H), 4.56 (d, J=9.4 Hz, 1H), 4.52-4.33 (m, 4H), 4.30-4.21 (m, 1H), 4.13-4.07 (m, 1H), 3.95 (s, 2H), 3.71-3.47 (m, 6H), 3.41-3.37 (m, 2H), 3.19-3.05 (m, 2H), 2.65-2.57 (m, 1H), 2.45 (s, 3H), 2.38-2.30 (m, 3H), 2.26-2.18 (m, 1H), 2.10-2.02 (m, 1H), 1.95-1.76 (m, 4H), 1.70-1.56 (m, 3H), 1.46 (d, J=9.4 Hz, 1H), 1.34-1.21 (m, 2H), 1.02 (d, J=7.2 Hz, 3H), 0.97-0.90 (m, 9H), 0.83 (d, J=6.8 Hz, 3H).
In a manner similar to Step 1 of Example 14, the titled compound (0.13 g, 0.12 mmol, 31.58% yield, 97% purity) was obtained as a white solid.
MS (M+H)+=1080.5
1H NMR (400 MHz, CDCl3) δ 8.68 (s, 1H), 7.35 (d, J=2.9 Hz, 5H), 7.25 (s, 1H), 5.96 (d, J=9.6 Hz, 1H), 5.83-5.72 (m, 1H), 5.50 (s, 1H), 5.37 (s, 1H), 5.19 (s, 1H), 4.73 (t, J=7.9 Hz, 1H), 4.68-4.45 (m, 4H), 4.34 (dd, J=14.9, 5.3 Hz, 1H), 4.28 (t, J=3.8 Hz, 1H), 4.11-4.05 (m, 1H), 4.06-3.92 (m, 2H), 3.66 (s, 4H), 3.61-3.56 (m, 4H), 3.53-3.47 (m, 2H), 3.42-3.20 (m, 2H), 2.62-2.51 (m, 6H), 2.42-2.30 (m, 2H), 2.24-2.02 (m, 3H), 1.89-1.79 (m, 3H), 1.79-1.66 (m, 4H), 1.50-1.23 (m, 3H), 1.05 (d, J=7.0 Hz, 3H), 0.98-0.93 (m, 9H), 0.89-0.87 (m, 12H), 0.07 (d, J=0.9 Hz, 6H).
In a manner similar to Step 2 of Example 14, the titled compound (36.0 mg, 0.035 mmol, 29.20% yield, 94.3% purity) was obtained as a white solid.
MS (M+H)+=966.3
1H NMR (400 MHz, DMSO-d6) δ 8.98 (s, 1H), 8.58 (t, J=6.0 Hz, 1H), 7.40 (s, 5H), 6.99 (s, 1H), 5.91 (d, J=9.6 Hz, 1H), 5.79-5.73 (m, 1H), 5.45 (s, 1H), 5.16 (dd, J=3.4, 10.6 Hz, 2H), 5.04 (s, 1H), 4.56 (d, J=9.6 Hz, 1H), 4.51-4.33 (m, 4H), 4.29-4.22 (m, 1H), 4.10 (s, 1H), 3.96 (s, 2H), 3.60-3.40 (m, 10H), 3.41-3.37 (m, 2H), 3.19-3.05 (m, 2H), 2.70-2.66 (m, 1H), 2.46-2.43 (m, 3H), 2.39-2.34 (m, 3H), 2.26-2.20 (m, 1H), 2.09-2.00 (m, 1H), 1.94-1.77 (m, 4H), 1.71-1.61 (m, 3H), 1.53-1.44 (m, 1H), 1.35-1.22 (m, 2H), 1.02 (d, J=7.46 Hz, 3H), 0.96-0.91 (m, 9H), 0.84 (d, J=6.9 Hz, 3H).
In a manner similar to Step 1 of Example 14, the titled compound (0.14 g, 124.50 μmol, 41.32% yield) was obtained as a yellow oil.
MS (M+H)+=1124.6
1H NMR (400 MHz, CDCl3) δ 8.68 (s, 1H), 7.41-7.31 (m, 5H), 7.25 (s, 1H), 5.96 (d, J=9.7 Hz, 1H), 5.77 (dd, J=9.6, 6.0 Hz, 1H), 5.50 (s, 1H), 5.35 (s, 1H), 5.20 (s, 1H), 4.73 (t, J=7.9 Hz, 1H), 4.68-4.45 (m, 4H), 4.35 (dd, J=14.9, 5.2 Hz, 1H), 4.32-4.25 (m, 1H), 4.11 (d, J=11.5 Hz, 1H), 4.09-3.93 (m, 2H), 3.69-3.64 (m, 4H), 3.64-3.59 (m, 4H), 3.60-3.55 (m, 4H), 3.54-3.46 (m, 2H), 3.42-3.23 (m, 2H), 2.61-2.49 (m, 6H), 2.44-2.31 (m, 2H), 2.28-2.03 (m, 3H), 1.92-1.68 (m, 7H), 1.49-1.23 (m, 3H), 1.06 (d, J=7.3 Hz, 3H), 0.96-0.93 (m, 9H), 0.91-0.85 (m, 12H), 0.08 (d, J=0.9 Hz, 6H).
In a manner similar to Step 2 of Example 14, the titled compound (39.4 mg, 0.034 mol, 27.25% yield, 87% purity) was obtained as a white solid.
MS (M+H)+=1010.3
1H NMR (400 MHz, DMSO-d6) δ 8.98 (s, 1H), 8.60 (t, J=6.1 Hz, 1H), 7.40 (s, 5H), 7.00 (t, J=5.7 Hz, 1H), 5.91 (d, J=9.6 Hz, 1H), 5.76 (dd, J=9.6, 6.0 Hz, 1H), 5.46 (t, J=3.4 Hz, 1H), 5.04 (q, J=3.2 Hz, 1H), 4.56 (d, J=9.5 Hz, 1H), 4.52-4.32 (m, 4H), 4.25 (dd, J=15.8, 5.6 Hz, 1H), 4.09 (p, J=3.8 Hz, 1H), 3.96 (s, 2H), 3.67 (dd, J=10.7, 4.0 Hz, 2H), 3.62-3.58 (m, 4H), 3.58-3.52 (m, 8H), 3.34 (s, 2H), 3.07 (q, J=7.2, 6.6 Hz, 2H), 2.62 (dd, J=17.2, 4.6 Hz, 1H), 2.44 (s, 3H), 2.33 (dd, J=12.6, 7.8 Hz, 3H), 2.26-2.17 (m, 1H), 2.10-2.00 (m, 1H), 1.95-1.78 (m, 4H), 1.73-1.57 (m, 3H), 1.52-1.42 (m, 1H), 1.36-1.22 (m, 2H), 1.04-0.99 (m, 3H), 0.97-0.91 (m, 9H), 0.83 (d, J=6.8 Hz, 3H).
In a manner similar to Step 1 of Example 14, the titled compound (0.12 g, 0.1 mmol, 36.35% yield) was obtained as a yellow oil.
MS (M+H)+=1168.8
1H NMR (400 MHz, CDCl3) δ 8.68 (s, 1H), 7.39-7.31 (m, 5H), 7.27 (s, 1H), 5.96 (d, J=9.6 Hz, 1H), 5.77 (dd, J=9.6, 6.1 Hz, 1H), 5.50 (s, 1H), 5.31 (t, J=5.7 Hz, 1H), 5.20 (s, 1H), 4.73 (t, J=7.9 Hz, 1H), 4.68-4.45 (m, 4H), 4.34 (dd, J=14.9, 5.3 Hz, 1H), 4.30-4.25 (m, 1H), 4.09 (d, J=11.4 Hz, 1H), 4.06-3.94 (m, 2H), 3.70-3.64 (m, 4H), 3.62 (s, 4H), 3.60 (s, 4H), 3.59-3.55 (m, 4H), 3.51 (d, J=6.3 Hz, 2H), 3.30 (d, J=5.4 Hz, 2H), 2.63-2.50 (m, 6H), 2.46-2.32 (m, 2H), 2.26-2.04 (m, 3H), 1.88-1.63 (m, 7H), 1.60-1.15 (m, 3H), 1.06 (d, J=7.3 Hz, 3H), 0.98-0.91 (m, 9H), 0.91-0.87 (m, 12H), 0.07 (d, J=0.9 Hz, 6H).
In a manner similar to Step 2 of Example 14, the titled compound (65.5 mg, 0.054. mmol, 53.12% yield, 87.8% purity) was obtained as a white solid.
MS (M+H)+=1054.6
1H NMR (400 MHz, DMSO-d6) δ 8.99 (s, 1H), 8.62 (t, J=6.0 Hz, 1H), 7.45-7.38 (m, 5H), 7.05-6.94 (m, 1H), 5.91 (d, J=9.6 Hz, 1H), 5.77 (dd, J=9.6, 6.0 Hz, 1H), 5.46 (d, J=3.7 Hz, 1H), 5.05 (q, J=3.3 Hz, 1H), 4.57 (d, J=9.6 Hz, 1H), 4.53-4.35 (m, 4H), 4.25 (dd, J=15.7, 5.6 Hz, 1H), 4.10 (q, J=3.8 Hz, 1H), 3.97 (s, 2H), 3.68 (dd, J=10.6, 3.9 Hz, 2H), 3.62-3.52 (m, 10H), 3.48-3.46 (m, 8H), 3.13-3.06 (m, 2H), 2.62 (dd, J=17.2, 4.6 Hz, 1H), 2.45 (s, 3H), 2.43-2.18 (m, 5H), 2.08-2.04 (m, 1H), 1.96-1.74 (m, 5H), 1.72-1.58 (m, 3H), 1.53-1.43 (m, 1H), 1.33-1.24 (m, 2H), 1.03 (dd, J=7.1, 4.9 Hz, 3H), 0.96-0.92 (m, 9H), 0.83 (d, J=6.6 Hz, 3H).
To a solution of 2-(2-aminoethoxy) ethanol (5.3 g, 50.41 mmol, 5.05 mL) in DCM (20 mL) was added Boc2O (11.00 g, 50.41 mmol, 11.58 mL). The mixture was stirred at 25° C. for 3 h. TLC showed a main new spot was formed. DCM (80 mL) and water (100 mL) were added and layers were separated. The aqueous phase was extracted with DCM (80 mL×2). Combined extracts were washed with brine (100 mL), dried over Na2SO4, filtered. The filtrate was concentrated under vacuum. The residue was purified by silica gel chromatography (Petroleum ether/Ethyl acetate=1/1) to afford tert-butyl N-[2-(2-hydroxyethoxy)ethyl]carbamate (9.1 g, 44.34 mmol, 87.95% yield) as a colorless oil.
1H NMR (400 MHz, CDCl3) δ=5.18 (s, 1H), 3.70 (d, J=3.6 Hz, 2H), 3.63-3.43 (m, 4H), 3.30 (d, J=4.2 Hz, 2H), 2.89 (dd, J=3.2, 5.2 Hz, 1H), 1.41 (s, 9H).
To a solution of tert-butyl N-[2-(2-hydroxyethoxy) ethyl] carbamate (4 g, 19.49 mmol) in DCM (40 mL) was added pyridine (1.54 g, 19.49 mmol, 1.57 mL) and TosCl (4.09 g, 21.44 mmol) at 0° C. and the resulting mixture was stirred at 25° C. for 2 h. LCMS showed 32% desired mass was detected. DCM (150 mL) and water (200 mL) were added and layers were separated. The aqueous phase was extracted with DCM (100 mL×2). Combined extracts were washed with brine (20 mL), dried over Na2SO4, filtered. The filtrate was concentrated under vacuum. The residue was purified by silica gel chromatography (Petroleum ether:Ethyl acetate=2:1) to afford 2-[2-(tert-butoxycarbonylamino)ethoxy] ethyl 4-methylbenzenesulfonate (3.9 g, 10.85 mmol, 55.68% yield) as a yellow oil. MS (M+H)+=360.1
To a solution of 1-fluorocyclopropanecarboxylic acid (2.68 g, 25.74 mmol) in DMF (150 mL) was added HATU (12.23 g, 32.17 mmol) followed by DIPEA (13.86 g, 107.24 mmol, 18.68 mL). The mixture was stirred at 25° C. for 15 minutes. Then (2S, 4R)-1-[(2S)-2-amino-3, 3-dimethyl-butanoyl]-4-hydroxy-N-[[2-hydroxy-4-(4-methylthiazol-5-yl) phenyl] methyl] pyrrolidine-2-carboxamide (10.36 g, 21.45 mmol, HCl salt) was added and the resulting mixture was stirred at 25° C. for 2 h. LCMS showed starting material was consumed completely and 17% of desired mass and 63% of the mass of (2S, 4R)-1-[(2S)-2-[(1-fluorocyclopropanecarbonyl) amino]-3, 3-dimethyl-butanoyl]-4-hydroxy-N-[[2-hydroxy-4-(4-methylthiazol-5-yl) phenyl] methyl] pyrrolidine-2-carboxamide was detected. The mixture was quenched by addition of H2O (500 mL) and extracted with EtOAc (500 mL×3). The combined organic layers were washed with CaCl2) (sat.aq, 300 mL×3), dried over Na2SO4, filtered. The filtrate was concentrated under reduced pressure. The residue was dissolved in MeOH (100 mL) and NaHCO3 (sat.aq, 100 mL) was added. The mixture was stirred at 25° C. for 0.5 h. LCMS showed 95% of desired mass was detected. The mixture was concentrated under reduced pressure to remove most of MeOH and extracted with EtOAc (200 mL×2). The combined organic layers were washed with brine (300 mL), dried over Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (SiO2, 100˜200 mesh, Petroleum ether/Ethyl acetate=1/1 to 0/1) to afford (2S, 4R)-1-[(2S)-2-[(1-fluorocyclopropanecarbonyl) amino]-3, 3-dimethyl-butanoyl]-4-hydroxy-N-[[2-hydroxy-4-(4-methylthiazol-5-yl) phenyl] methyl] pyrrolidine-2-carboxamide (5.24 g, 9.25 mmol, 43.13% yield, 94% purity)) as a brown solid. SFC (retention time=1.805, analysis method: “Column: Chiralpak IC-3 50×4.6 mm I.D., 3 μm; Mobile phase: Phase A for CO2, and Phase B for MeOH (0.05% DEA); Gradient elution: MeOH (0.05% DEA) in CO2 from 5% to 40%; Flow rate: 3 mL/min; Detector: PDA; Column Temp: 35C; Back Pressure: 100 Bar”).
MS (M+H)+=533.1
1H NMR (400 MHz, DMSO-d6) δ=9.80 (s, 1H), 8.95 (s, 1H), 8.52 (t, J=5.8 Hz, 1H), 7.45-7.21 (m, 2H), 6.96-6.81 (m, 2H), 5.16 (d, J=3.4 Hz, 1H), 4.59 (d, J=9.1 Hz, 1H), 4.51 (t, J=8.2 Hz, 1H), 4.35 (s, 1H), 4.29-4.15 (m, 2H), 3.71-3.55 (m, 2H), 2.45 (s, 3H), 2.13-2.03 (m, 1H), 1.92 (ddd, J1=12.6 Hz, J2=8.6 Hz, J3=3.9 Hz, 1H), 1.42-1.31 (m, 2H), 1.25-1.20 (m, 2H), 0.96 (s, 9H).
To a solution of (2S, 4R)-1-[(2S)-2-[(1-fluorocyclopropanecarbonyl) amino]-3, 3-dimethyl-butanoyl]-4-hydroxy-N-[[2-hydroxy-4-(4-methylthiazol-5-yl) phenyl] methyl]pyrrolidine-2-carboxamide (1.5 g, 2.65 mmol) and 2-[2-(tert-butoxycarbonylamino) ethoxy]ethyl 4-methylbenzenesulfonate (1.60 g, 3.97 mmol) in DMF (25 mL) was added K2CO3 (2.20 g, 15.88 mmol) and the resulting mixture was stirred at 40° C. for 12 h. LCMS showed the starting material was consumed completely and 93% of desired mass was detected. The reaction mixture was diluted with brine (40 mL), and extracted with EtOAc (50 mL×3). The combined organic layers were washed with CaCl2 (sat.aq, 50 mL×2), dried over Na2SO4, filtered. The filtrate was concentrated under reduced pressure. The residue was purified by silica gel column chromatography (SiO2, 100˜200 mesh, EtOAc:MeOH=1:0˜20:1). Compound (tert-butyl N-[2-[2-[2-[[[(2S, 4R)-1-[(2S)-2-[(1-fluorocyclopropanecarbonyl) amino]-3, 3-dimethyl-butanoyl]-4-hydroxy-pyrrolidine-2-carbonyl] amino] methyl]-5-(4-methylthiazol-5-yl) phenoxy] ethoxy] ethyl] carbamate (1.74 g, 2.32 mmol, 87.65% yield, 96% purity)) was obtained as a colourless oil. MS (M+H)+=720.1.
To a solution of tert-butyl N-[2-[2-[2-[[[(2S, 4R)-1-[(2S)-2-[(1-fluorocyclopropanecarbonyl) amino]-3, 3-dimethyl-butanoyl]-4-hydroxy-pyrrolidine-2-carbonyl] amino] methyl]-5-(4-methylthiazol-5-yl) phenoxy] ethoxy] ethyl] carbamate (1.74 g, 2.42 mmol) in MeOH (10 mL) was added HCl/MeOH (4 M, 15.92 mL). The mixture was stirred at 25° C. for 2 h. LCMS showed 75% of desired mass was detected. The reaction mixture was concentrated under reduced pressure. Compound ((2S, 4R)—N-[[2-[2-(2-aminoethoxy) ethoxy]-4-(4-methylthiazol-5-yl) phenyl] methyl]-1-[(2S)-2-[(1-fluorocyclopropanecarbonyl) amino]-3, 3-dimethyl-butanoyl]-4-hydroxy-pyrrolidine-2-carboxamide (1.94 g, crude, HCl)) was obtained as a yellow solid, which was used for next step without any further purification. MS (M+H)+=620.3.
A mixture of (2S, 4R)—N-[[2-[2-(2-aminoethoxy) ethoxy]-4-(4-methylthiazol-5-yl) phenyl] methyl]-1-[(2S)-2-[(1-fluorocyclopropanecarbonyl) amino]-3, 3-dimethyl-butanoyl]-4-hydroxy-pyrrolidine-2-carboxamide (252 mg, 303.38 μmol, HCl salt), [(1S, 3R, 7S, 8S, 8aR)-8-[2-[(2R, 4R)-4-[tert-butyl (dimethyl) silyl]oxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3, 7-dimethyl-1, 2, 3, 7, 8, 8a-hexahydronaphthalen-1-yl] (4-nitrophenyl) carbonate (568.63 mg, 455.07 μmol) and TEA (153.50 mg, 1.52 mmol, 211.13 μL) in DMAC (3 mL) was stirred at 25° C. for 12 h. LCMS showed 41% of desired mass was detected. The reaction mixture was quenched by addition of H2O (20 mL) and extracted with EtOAc (40 mL×3). The combined organic layers were washed with CaCl2 (sat.aq, 50 mL×2), dried over Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by prep-HPLC (column: Phenomenex Synergi C18 150*25*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %0: 70%-1000%, 8 min). Compound ((1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3, 7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(((2S,4R)-1-((S)-2-(1-fluorocyclopropane-1-carboxamido)-3,3-dimethylbutanoyl)-4-hydroxypyrrolidine-2-carboxamido)methyl)-5-(4-methylthiazol-5-yl)phenoxy)ethoxy)ethyl)carbamate (92 mg, 83.45 μmol, 27.51% yield, 9800 purity) was obtained as a white solid. SFC: (retention time=1.973, analysis method: “Column: Cellucoat 50×4.6 mm I.D., 3 μm; Mobile phase: Phase A for CO2, and Phase B for IPA (0.05% DEA); Gradient elution: IPA (0.05% DEA) in CO2 from 5% to 40% Flow rate: 3 mL/min; Detector: PDA; Column Temp: 35C; Back Pressure: 100 Bar”).
MS (M+H)+=1080.3.
1H NMR (400 MHz, DMSO-d6) δ 8.99 (s, 1H), 8.50 (t, J=6.0 Hz, 1H), 7.42 (d, J=7.7 Hz, 1H), 7.32-7.26 (m, 1H), 7.09-6.96 (m, 3H), 5.92 (d, J=9.6 Hz, 1H), 5.79-5.71 (m, 1H), 5.47 (s, 1H), 5.18 (d, J=3.6 Hz, 1H), 5.06 (s, 1H), 4.61 (d, J=9.2 Hz, 1H), 4.55-4.45 (m, 2H), 4.40-4.25 (m, 4H), 4.25-4.09 (m, 4H), 3.76 (s, 2H), 3.68-3.59 (m, 2H), 3.49 (t, J=6.2 Hz, 2H), 3.18-3.09 (m, 2H), 2.70-2.67 (m, 1H), 2.46 (s, 3H), 2.37-2.33 (m, 2H), 2.26-2.22 (m, 1H), 2.13-2.07 (m, 1H), 1.95-1.90 (m, 1H), 1.86-1.82 (m, 2H), 1.74-1.65 (m, 3H), 1.52-1.45 (m, 1H), 1.41-1.32 (m, 3H), 1.28-1.21 (m, 3H), 1.04 (d, J=7.3 Hz, 3H), 0.98-0.95 (m, 9H), 0.85-0.81 (m, 12H), 0.06 (s, 6H).
The mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(((2S,4R)-1-((S)-2-(1-fluorocyclopropane-1-carboxamido)-3, 3-dimethylbutanoyl)-4-hydroxypyrrolidine-2-carboxamido)methyl)-5-(4-methylthiazol-5-yl)phenoxy)ethoxy)ethyl)carbamate (500 mg, 462.78 μmol) in HCOOH (2 mL) was stirred at 20° C. for 3 h. LCMS showed that 45% desired mass was detected. The mixture was adjusted pH=˜5 with NaHCO3 solid. The resulting mixture was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 42%-72%, 11 min) followed by prep-TLC (Ethylacetate:Methanol=10/1) to obtain 70 mg of crude product, the crude product was re-purified by prep-HPLC (column: 3_Phenomenex Luna C18 75*30 mm*3 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 48%-68%, 8 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(((2S,4R)-1-((S)-2-(1-fluorocyclopropane-1-carboxamido)-3,3-dimethylbutanoyl)-4-hydroxypyrrolidine-2-carboxamido)methyl)-5-(4-methylthiazol-5-yl)phenoxy)ethoxy)ethyl)carbamate (24.4 mg, 24.24 μmol, 5.24% yield, 93% purity) as white solid.
SFC: (retention time=2.083 min, analysis method: “Column: Chiralcel OD-3 50×4.6 mm I.D., 3 μm Mobile phase: Phase A for CO2, and Phase B for MeOH (0.05% DEA); Gradient elution: MeOH (0.05% DEA) in CO2 from 5% to 40% Flow rate: 3 mL/min; Detector: PDA, Column Temp: 35° C.; Back Pressure: 100 Bar.”)
MS (M+H)+=966.4.
1H NMR (400 MHz, CDCl3) δ 8.68 (s, 1H), 7.34 (d, J=7.7 Hz, 1H), 7.20-7.10 (m, 1H), 6.98 (dd, J=7.7, 1.6 Hz, 1H), 6.88 (d, J=1.6 Hz, 1H), 5.96 (d, J=9.6 Hz, 1H), 5.78 (dd, J=9.6, 6.1 Hz, 1H), 5.49 (s, 1H), 5.23 (s, 1H), 5.14 (s, 1H), 4.72-4.44 (m, 6H), 4.30-4.11 (m, 3H), 3.98 (d, J=11.1 Hz, 1H), 3.88 (s, 2H), 3.70-3.28 (m, 6H), 2.73-2.53 (m, 2H), 2.53 (s, 3H), 2.49-2.15 (m, 5H), 2.04-1.69 (m, 6H), 1.42-1.17 (m, 7H), 1.04 (d, J=6.8 Hz, 3H), 1.02-0.90 (m, 9H), 0.88 (d, J=7.0 Hz, 3H).
In a manner similar to Step 1 of Example 23, 27, the titled compound (4.7 g, 18.85 mmol, 93.75% yield) was obtained as a colorless oil.
1H NMR (400 MHz, CDCl3) δ=5.20 (s, 1H), 3.84-3.46 (m, 11H), 3.30 (d, J=4.9 Hz, 2H), 1.53-1.41 (m, 9H).
In a manner similar to Step 2 of Example 23, 27, the titled compound (3.4 g, 6.40 mmol, 33.97% yield, 76% purity) was obtained as a colorless oil.
MS (M+H)+=404.2
In a manner similar to Step 4 of Example 23, 27, the titled compound (1.72 g, 2.18 mmol, 82.50% yield, 97% purity) was obtained as a yellowish oil.
MS (M+H)+=764.2.
In a manner similar to Step 5 of Example 23, 27, the titled compound (1.75 g, crude, HCl salt) was obtained as a yellow solid.
MS (M+H)+=664.4.
In a manner similar to Step 6 of Example 23, 27, the titled compound (135.5 mg, 115.68 μmol, 4.63% yield, 96% purity) was obtained as a white solid.
SFC: (retention time: 0.616, analysis method: “Column: Chiralpak IG-3 50×4.6 mm I.D., 3 μm; Mobile phase: Phase A for CO2, and Phase B for IPA+ACN (0.05% DEA); Gradient elution: 50% IPA+ACN (0.05% DEA) in CO2; Flow rate: 3 mL/min; Detector: PDA; Column Temp: 35C; Back Pressure: 100 Bar”).
MS (M+H)+=1124.2
1H NMR (400 MHz, DMSO-d6) δ 8.98 (s, 1H), 8.54-8.43 (m, 1H), 7.41 (d, J=7.8 Hz, 1H), 7.29 (dd, J=9.4, 2.8 Hz, 1H), 7.04-6.95 (m, 3H), 5.90 (d, J=9.7 Hz, 1H), 5.74 (s, 1H), 5.45 (s, 1H), 5.17 (d, J=3.6 Hz, 1H), 5.09-5.01 (m, 1H), 4.60 (d, J=9.2 Hz, 1H), 4.54-4.44 (m, 2H), 4.39-4.10 (m, 8H), 3.78 (t, J=4.6 Hz, 2H), 3.67-3.59 (m, 4H), 3.53-3.49 (m, 2H), 3.40-3.36 (m, 2H), 3.09 (t, J=6.1 Hz, 2H), 2.71-2.66 (m, 1H), 2.46 (s, 3H), 2.37-2.32 (m, 2H), 2.27-2.21 (m, 1H), 2.12-2.05 (m, 1H), 1.95-1.88 (m, 1H), 1.84-1.77 (m, 3H), 1.73-1.64 (m, 3H), 1.51-1.45 (m, 1H), 1.39-1.33 (m, 2H), 1.26-1.20 (m, 3H), 1.03 (d, J=7.3 Hz, 3H), 0.98-0.93 (m, 9H), 0.85-0.81 (m, 12H), 0.05 (s, 6H).
The mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(2-(((2S,4R)-1-((S)-2-(1-fluorocyclopropane-1-carboxamido)-3,3-dimethylbutanoyl)-4-hydroxypyrrolidine-2-carboxamido)methyl)-5-(4-methylthiazol-5-yl)phenoxy)ethoxy)ethoxy)ethyl)carbamate (300 mg, 266.79 μmol) in THE (10 mL) was added TBAF (1 M, 1.07 mL) and AcOH (80.11 mg, 1.33 mmol, 76.29 μL) and the resulting mixture was stirred at 25° C. for 12 h. LCMS showed 71% desired mass was detected. The mixture was poured into water (50 mL) and extracted with EtOAc (50 mL×3). The combined organic layer was washed with brine (100 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-TLC (Ethylacetate:Methanol=10:1) followed by prep-HPLC (column: Shim-pack C18 150*25*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 54%-74%, 9 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(2-(((2S,4R)-1-((S)-2-(1-fluorocyclopropane-1-carboxamido)-3,3-dimethylbutanoyl)-4-hydroxypyrrolidine-2-carboxamido)methyl)-5-(4-methylthiazol-5-yl)phenoxy)ethoxy)ethoxy)ethyl)carbamate (70.4 mg, 68.99 μmol, 25.86% yield, 99% purity) as white solid.
SFC: (retention time=2.083 min, Column: Chiralcel OD-3 50×4.6 mm I.D., 3 μm Mobile phase: Phase A for CO2, and Phase B for MeOH (0.05% DEA); Gradient elution: MeOH (0.05% DEA) in CO2 from 5% to 40%, Flow rate: 3 mL/min; Detector: PDA Column Temp: 35° C.; Back Pressure: 100 Bar”).
MS (M+H)+=1011.0
1H NMR (400 MHz, CDCl3) δ 8.70 (s, 1H), 7.39-7.35 (m, 1H), 7.13 (s, 1H), 7.00 (dd, J=7.7, 1.6 Hz, 1H), 6.92 (s, 1H), 5.97 (d, J=9.7 Hz, 1H), 5.77 (s, 1H), 5.52 (s, 1H), 5.32-5.20 (m, 2H), 4.70-4.46 (m, 6H), 4.31-4.16 (m, 3H), 4.00 (d, J=11.4 Hz, 1H), 3.97-3.87 (m, 2H), 3.79-3.61 (m, 6H), 3.61-3.45 (m, 2H), 3.37-3.19 (m, 2H), 2.75-2.58 (m, 2H), 2.55 (s, 3H), 2.48-2.20 (m, 5H), 2.07-1.67 (m, 6H), 1.42-1.25 (m, 7H), 1.08 (d, J=7.4 Hz, 3H), 1.04-1.00 (m, 9H), 0.89 (d, J=6.9 Hz, 3H).
In a manner similar to Step 1 of Example 23, 27, the titled compound (3.9 g, crude) was obtained as a colorless oil.
In a manner similar to Step 2 of Example 23, 27, the titled compound (3.1 g, 5.61 mmol, 42.20% yield, 81% purity) was obtained as a colorless oil.
MS (M+H)+=448.2
In a manner similar to Step 4 of Example 23, 27, the titled compound (1.68 g, 1.68 mmol, 63.62% yield, 81% purity) was obtained as a yellowish oil.
MS (M+H)+=808.2
To a solution of tert-butyl (2-(2-(2-(2-(2-(((2S,4R)-1-((S)-2-(1-fluorocyclopropane-1-carboxamido)-3,3-dimethylbutanoyl)-4-hydroxypyrrolidine-2-carboxamido)methyl)-5-(4-methylthiazol-5-yl)phenoxy)ethoxy)ethoxy)ethoxy)ethyl)carbamate (1.68 g, 2.08 mmol) in MeOH (10 mL) was added HCl/MeOH (4 M, 15 mL). The reaction mixture was stirred at 25° C. for 2 h. LCMS showed the starting material was consumed completely. The reaction mixture was concentrated under reduced pressure. Compound ((2S, 4R)—N-[[2-[2-[2-[2-(2-aminoethoxy) ethoxy] ethoxy] ethoxy]-4-(4-methylthiazol-5-yl) phenyl] methyl]-1-[(2S)-2-[(1-fluorocyclopropanecarbonyl) amino]-3, 3-dimethyl-butanoyl]-4-hydroxy-pyrrolidine-2-carboxamide (1.78 g, crude, HCl salt)) was obtained as a yellow solid, which was used for next step without any further purification.
MS (M+H)+=708.4.
In a manner similar to Step 6 of Example 23, 27, the titled compound (148.9 mg, 124.88 μmol, 4.97% yield, 98% purity) was obtained as a white solid.
MS (M+H)+=1168.2
1H NMR (400 MHz, DMSO-d6) δ 8.99 (s, 1H), 8.49 (t, J=6.0 Hz, 1H), 7.41 (d, J=7.8 Hz, 1H), 7.29 (dd, J=9.4, 2.8 Hz, 1H), 7.04 (d, J=1.6 Hz, 1H), 7.01-6.95 (m, 2H), 5.90 (d, J=9.7 Hz, 1H), 5.75 (dd, J=9.6, 5.9 Hz, 1H), 5.46 (s, 1H), 5.17 (d, J=3.6 Hz, 1H), 5.08-5.01 (m, 1H), 4.60 (d, J=9.2 Hz, 1H), 4.55-4.45 (m, 2H), 4.44-4.06 (m, 8H), 3.81-3.76 (m, 2H), 3.67-3.60 (m, 4H), 3.56-3.52 (m, 2H), 3.50-3.46 (m, 4H), 3.38-3.35 (m, 2H), 3.14-3.03 (m, 2H), 2.71-2.66 (m, 1H), 2.47 (s, 3H), 2.36-2.31 (m, 2H), 2.26-2.21 (m, 1H), 2.14-2.06 (m, 1H), 1.95-1.89 (m, 1H), 1.86-1.78 (m, 3H), 1.73-1.64 (m, 3H), 1.53-1.44 (m, 1H), 1.41-1.35 (m, 2H), 1.28-1.20 (m, 3H), 1.03 (d, J=7.3 Hz, 3H), 0.98-0.95 (m, 9H), 0.85-0.83 (m, 12H), 0.06 (s, 6H).
The mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(2-(2-(((2S,4R)-1-((S)-2-(1-fluorocyclopropane-1-carboxamido)-3,3-dimethylbutanoyl)-4-hydroxypyrrolidine-2-carboxamido)methyl)-5-(4-methylthiazol-5-yl)phenoxy)ethoxy)ethoxy)ethoxy)ethyl)carbamate (300 mg, 256.73 μmol) in THF (10 mL) was added TBAF (1 M, 1.03 mL) and AcOH (77.09 mg, 1.28 mmol, 73.42 μL) and the resulting mixture was stirred at 20° C. for 12 h. LCMS showed that 66% desired mass was detected. The mixture was poured into water (50 mL) and extracted with EtOAc (50 mL×3). The combined organic layer was washed with brine (100 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-TLC (Ethylacetate:Methanol=10/1) followed by prep-HPLC (column: Shim-pack C18 150*25*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 52%-72%, 9 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(2-(2-(((2S,4R)-1-((S)-2-(1-fluorocyclopropane-1-carboxamido)-3,3-dimethylbutanoyl)-4-hydroxypyrrolidine-2-carboxamido)methyl)-5-(4-methylthiazol-5-yl)phenoxy)ethoxy)ethoxy)ethoxy)ethyl)carbamate (63 mg, 59.16 μmol, 23.04% yield, 99% purity) as white solid.
SFC: (retention time=2.170 min, analysis method: “Column: Chiralcel OD-3 50×4.6 mm I.D., 3 μm Mobile phase: Phase A for CO2, and Phase B for MeOH (0.05% DEA); Gradient elution: MeOH (0.05% DEA) in CO2 from 5% to 40% Flow rate: 3 mL/min; Detector: PDA, Column Temp: 35° C.; Back Pressure: 100 Bar”).
MS (M+H)+=1055.1.
1H NMR (400 MHz, CDCl3) δ 8.68 (s, 1H), 7.35 (d, J=7.7 Hz, 1H), 7.12 (s, 1H), 6.98 (dd, J=7.7, 1.6 Hz, 1H), 6.90 (s, 1H), 5.95 (d, J=9.7 Hz, 1H), 5.76 (dd, J=9.6, 6.0 Hz, 1H), 5.50 (s, 1H), 5.40-5.17 (m, 2H), 4.65-4.46 (m, 6H), 4.28-4.16 (m, 3H), 3.97-3.86 (m, 3H), 3.79-3.65 (m, 6H), 3.61-3.46 (m, 6H), 3.34-3.22 (m, 2H), 2.71-2.56 (m, 2H), 2.53 (s, 3H), 2.45-2.17 (m, 5H), 2.10-1.69 (m, 6H), 1.42-1.21 (m, 7H), 1.06 (d, J=7.4 Hz, 3H), 1.02-0.96 (m, 9H), 0.88 (d, J=7.0 Hz, 3H).
To a solution of 2-[2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethoxy]ethanol (1 g, 4.21 mmol) in DCM (40 mL) was added CbzCl (718.91 mg, 4.21 mmol, 599.10 μL) and DIPEA (1.09 g, 8.43 mmol, 1.47 mL) and the resulting mixture was added at 25° C. for 16 h. LCMS showed desired mass was detected. The reaction mixture was concentrated in vacuum. Compound benzyl N-[2-[2-[2-[2-(2-hydroxyethoxy)ethoxy]ethoxy]ethoxy]ethyl]carbamate (1.5 g, crude) was obtained as a yellow oil, which was used into the next step without further purification.
In a manner similar to Step 2 of Example 23, 27, the titled compound (540 mg, 945.19 μmol, 23.40% yield, 92% purity) was obtained as a yellow oil.
MS (M+H)+=526.1
In a manner similar to Step 4 of Example 23, 27, the titled compound (490 mg, 508.78 μmol, 54.20% yield, 92% purity) was obtained as a yellow oil.
MS (M+H)+=886.0
To the solution of benzyl (14-(2-(((2S,4R)-1-((S)-2-(1-fluorocyclopropanecarboxamido)-3,3-dimethylbutanoyl)-4-hydroxypyrrolidine-2-carboxamido)methyl)-5-(4-methylthiazol-5-yl)phenoxy)-3,6,9,12-tetraoxatetradecyl)carbamate (380 mg, 428.88 μmol) in ACN (40 mL) was added TMSI (188.79 mg, 943.53 μmol, 128.43 μL) and the resulting mixture was stirred at 25° C. for 2 h. LCMS showed that the reaction was completed. Et3N (0.2 mL) was added into the mixture and the resulting mixture was stirred for another 0.5 h. The mixture was concentrated to afford (2S,4R)—N-(2-((14-amino-3,6,9,12-tetraoxatetradecyl)oxy)-4-(4-methylthiazol-5-yl)benzyl)-1-((S)-2-(1-fluorocyclopropanecarboxamido)-3,3-dimethylbutanoyl)-4-hydroxypyrrolidine-2-carboxamide (322 mg, crude) as yellow oil, which was used for next step directly. MS (M+H)+=752.3
In a manner similar to Step 6 of Example 23, 27, the titled compound (227.5 mg, 183.86 μmol, 29.28% yield, 98% purity) was obtained as a brown solid.
MS (M+H)+=1212.7
1H NMR (400 MHz, CDCl3) δ 8.68 (s, 1H), 7.33 (d, J=7.7 Hz, 2H), 7.08-7.02 (m, 1H), 6.97 (dd, J=7.7, 1.7 Hz, 1H), 6.90 (d, J=1.6 Hz, 1H), 5.96 (d, J=9.6 Hz, 1H), 5.76 (dd, J=9.6, 6.0 Hz, 1H), 5.50 (s, 1H), 5.43-5.32 (m, 1H), 5.20 (s, 1H), 4.69-4.61 (m, 2H), 4.55-4.45 (m, 4H), 4.28-4.15 (m, 3H), 3.96-3.87 (m, 3H), 3.74-3.55 (m, 14H), 3.53-3.46 (m, 2H), 3.42-3.24 (m, 2H), 2.63-2.54 (m, 2H), 2.52 (s, 3H), 2.44-2.31 (m, 3H), 2.27-2.20 (m, 1H), 2.16-2.05 (m, 2H), 1.89-1.83 (m, 2H), 1.67-1.60 (m, 3H), 1.45-1.38 (m, 1H), 1.36-1.22 (m, 6H), 1.06 (d, J=7.4 Hz, 3H), 0.98-0.94 (m, 9H), 0.89-0.87 (m, 12H), 0.07 (d, J=0.9 Hz, 6H).
In a manner similar to Step 7 of Example 23, 27, the titled compound (15.8 mg, 13.81 μmol, 54.17% yield, 94% purity) was obtained as a white solid.
MS (M+H)+=1098.6
1H NMR (400 MHz, CDCl3) δ 8.68 (s, 1H), 7.35 (d, J=7.7 Hz, 1H), 7.11 (s, 1H), 6.98 (d, J=8.5 Hz, 1H), 6.91 (s, 1H), 5.95 (d, J=9.6 Hz, 1H), 5.76 (dd, J=9.6, 6.1 Hz, 1H), 5.50 (s, 1H), 5.40-5.13 (m, 2H), 4.66-4.44 (m, 6H), 4.32-4.16 (m, 3H), 3.95-3.86 (m, 3H), 3.79-3.65 (m, 6H), 3.62-3.46 (m, 10H), 3.34-3.22 (m, 2H), 2.71-2.56 (m, 2H), 2.53 (s, 3H), 2.45-2.17 (m, 5H), 2.07-1.68 (m, 6H), 1.35-1.25 (m, 7H), 1.06 (d, J=7.4 Hz, 3H), 1.00-0.94 (m, 9H), 0.87 (d, J=3.2 Hz, 3H).
To a mixture of tert-butyl (2S)-2-carbamoylpyrrolidine-1-carboxylate (50.00 g, 233.36 mmol) in THE (500 mL) was added 2,4-bis(4-methoxyphenyl)-2,4-dithioxo-1,3,2,4dithiadiphosphetane (47.19 g, 116.68 mmol) at 30° C. under N2. The mixture was stirred at 30° C. for 3 h. TLC (SiO2, Dichloromethane:Methanol=10:1) indicated starting material was consumed completely and three new spots were detected. The reaction mixture was filtrated, the cake was dried in vacuum to afford tert-butyl (2S)-2-carbamothioylpyrrolidine-1-carboxylate (50 g, 217.08 mmol, 93.02% yield) as a white solid.
To a mixture of tert-butyl (2S)-2-carbamothioylpyrrolidine-1-carboxylate (50 g, 217.08 mmol) and KHCO3 (217.33 g, 2.17 mol) in DME (500 mL) was added ethyl 3-bromo-2-oxo-propanoate (63.50 g, 325.62 mmol, 40.71 mL) at 25° C. under N2. The mixture was stirred at 25° C. for 10 min, then to the mixture was added pyridine (154.54 g, 1.95 mol, 157.70 mL) and (CF3CO)2O (319.16 g, 1.52 mol, 211.36 mL) and the resulting mixture was stirred at 0° C. for 1 h. LCMS showed 38% of intermediate state remained and 52% desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=2:1) indicated starting material was consumed completely and four new spots were detected. The reaction mixture was combined with another batch (2 g scale) for work-up, the reaction mixture was concentrated in vacuum, the residue was diluted with H2O (300 mL) and extracted with EtOAc (300 mL×5). The combined organic layer was dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 3/1) to afford tert-butyl (S)-2-(4-(3-ethoxybenzoyl)thiazol-2-yl)pyrrolidine-1-carboxylate (34.5 g, 105.70 mmol, 48.69% yield) as a yellow oil.
To a mixture of tert-butyl (S)-2-(4-(3-ethoxybenzoyl)thiazol-2-yl)pyrrolidine-1-carboxylate (34.5 g, 105.70 mmol) in THF (350 mL) and was added a solution of LiOH.H2O (22.18 g, 528.48 mmol) in H2O (350 mL) dropwise at 0° C. The mixture was stirred at 25° C. for 2 h. LCMS showed starting material was consumed completely and 98% desired mass was detected. The reaction mixture was diluted with ice-H2O (100 mL) and added HCl (6 M) to adjust the PH to 5-6. The reaction mixture was extracted with EtOAc (50 mL×3). The combined organic layer was dried over Na2SO4, filtered, and concentrated to afford (S)-2-(1-(tert-butoxycarbonyl)pyrrolidin-2-yl)thiazole-4-carboxylic acid (29.5 g, 95.91 mmol, 90.74% yield, 97% purity) as a yellow oil. MS (M+H)+=299.2
To a solution of (S)-2-(1-(tert-butoxycarbonyl)pyrrolidin-2-yl)thiazole-4-carboxylic acid (27.5 g, 92.17 mmol) in DMF (200 mL) was added DIPEA (35.74 g, 276.51 mmol, 48.16 mL) and HATU (42.06 g, 110.61 mmol). The mixture was stirred at 25° C. for 30 min and a solution of N-methoxymethanamine (13.76 g, 141.02 mmol, HCl salt) in DMF (200 mL) with DIPEA (71.48 g, 553.03 mmol, 96.33 mL) was added and the resulting mixture was stirred at 25° C. for 2 h. LCMS showed starting material was consumed completely and desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=2:1) indicated starting material was consumed and one major new spot was detected. The reaction mixture was combined with another batch (2 g scale) for work-up, the combined reaction mixture was diluted with H2O (120 mL) and extracted with EtOAc (120 mL×3), the organic layer was washed with brine (120 mL×5) and citric acid (120 mL×3). The combined organic layer was dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=8/1 to 2/1) to afford tert-butyl (S)-2-(4-(methoxy(methyl)carbamoyl)thiazol-2-yl)pyrrolidine-1-carboxylate (29.4 g, 80.94 mmol, 87.82% yield, 94% purity) as a yellow oil. MS (M+H)+=362.4
To a mixture of tert-butyl (S)-2-(4-(methoxy(methyl)carbamoyl)thiazol-2-yl)pyrrolidine-1-carboxylate (29 g, 84.94 mmol) in THF (300 mL) was added bromo-(3-methoxyphenyl)magnesium (1 M, 169.88 mL) dropwise at −70° C. under N2 and the resulting mixture was stirred at −70° C. for 0.5 h. LCMS showed starting material was consumed completely and desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=5:1) indicated starting material was consumed completely and one major new spot was detected. The reaction mixture was combined with another batch (3 g, scale) for work-up, the combined reaction mixture was quenched with NH4Cl (sat.aq, 200 mL) and extracted with EtOAc (200 mL×3). The combined organic lawyer was dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 5/1) to afford tert-butyl (S)-2-(4-(3-methoxybenzoyl)thiazol-2-yl)pyrrolidine-1-carboxylate (16 g, 41.19 mmol, 48.49% yield) as a yellow oil, which is checked by SFC (retention time:1.117, 71% ee, analysis method: Column: Chiralpak AD-3 50×4.6 mm I.D., 3 μm; Mobile phase: Phase A for CO2, and Phase B for EtOH (0.05% DEA); Gradient elution: B in A from 5% to 40%; Flow rate: 3 mL/min; Detector: DAD; Column Temp: 35 C; Back Pressure: 100 Bar).
MS (M+H)+=389.1
Two batches in parallel: To a mixture of tert-butyl (S)-2-(4-(3-methoxybenzoyl)thiazol-2-yl)pyrrolidine-1-carboxylate (7.5 g, 19.31 mmol) in DMF (75 mL) was added NaSEt (12.99 g, 154.45 mmol) in one portion at 25° C. and the resulting mixture was stirred at 100° C. for 16 h. LCMS showed the starting material was consumed completely and desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=2:1) indicated starting material was consumed completely and two new spots were formed. Two parallel batches and combined with another batch (1 g scale) for work-up, the combined reaction mixture was diluted with H2O (150 mL) and extracted with EtOAc (150 mL×3). The organic layer was washed with brine (150 mL×3). The organic layer was dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=8/1 to 2/1) to afford tert-butyl (2S)-2-[4-(3-hydroxybenzoyl)thiazol-2-yl]pyrrolidine-1-carboxylate (9.4 g, 25.10 mmol, 65.01% yield) as a yellow oil, which is checked by SFC (two peaks on SFC (ratio is about 1/1), retention time: 0.976 and 1.069, analysis method: Column: Chiralcel OJ-3 50×4.6 mm I.D., 3 μm; Mobile phase: Phase A for CO2, and Phase B for MEOH (0.05% DEA); Gradient elution: B in A from 5% to 40%; Flow rate: 3 mL/min; Detector: DAD; Column Temp: 35 C; Back Pressure: 100 Bar). MS (M+H)+=375.1
To a mixture of tert-butyl (2S)-2-[4-(3-hydroxybenzoyl)thiazol-2-yl]pyrrolidine-1-carboxylate (9.4 g, 25.10 mmol) in dioxane (20 mL) was added HCl/dioxane (80 mL) at 25° C. The mixture was stirred at 25° C. for 1 h. LCMS showed the starting material was consumed completely and 84% desired mass was detected. The reaction mixture was concentrated in vacuum to afford (3-hydroxyphenyl)-[2-[(2S)-pyrrolidin-2-yl]thiazol-4-yl]methanone (8.1 g, crude) as a yellow oil, which was used in the next step.
MS (M+H)+=275.0
To a solution of (2S)-2-(tert-butoxycarbonylamino)-2-cyclohexyl-acetic acid (3.35 g, 13.03 mmol) in DMF (20 mL) was added DIPEA (5.05 g, 39.09 mmol, 6.81 mL) and HATU (5.45 g, 14.33 mmol), the mixture was stirred at 0° C. for 15 min, then a solution of (3-hydroxyphenyl)-[2-[(2S)-pyrrolidin-2-yl]thiazol-4-yl]methanone (4.05 g, 13.03 mmol, HCl salt) in DMF (20 mL) with DIPEA (10.10 g, 78.19 mmol, 13.62 mL) was added and the resulting mixture was stirred at 0° C. for 3 h. LCMS showed the starting material was consumed completely and desired mass was detected. The reaction mixture was combined with another batch (4.05 g scale) for work-up, the combined reaction mixture was diluted with H2O (20 mL) and extracted with EtOAc (20 mL). The organic layer was washed with brine (20 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=8/1 to 1/1) to afford tert-butyl ((S)-1-cyclohexyl-2-((S)-2-(4-(3-hydroxybenzoyl)thiazol-2-yl)pyrrolidin-1-yl)-2-oxoethyl)carbamate (4.9 g, 9.16 mmol, 70.29% yield, 96% purity) as a yellow oil, which is checked by SFC (two peaks on SFC (ratio is about 1/1), retention time: 3.052 and 3.485, analysis method: Column: (R,R)Whelk-01 100×4.6 mm I.D., 3.5 μm; Mobile phase: Phase A for C02, and Phase B for MEOH (0.05% DEA); Gradient elution: B in A from 5% to 40%; Flow rate: 3 mL/min; Detector: DAD; Column Temp: 35 C; Back Pressure: 120 Bar).
MS (M+H)+=514.2
To a mixture of tert-butyl ((S)-1-cyclohexyl-2-((S)-2-(4-(3-hydroxybenzoyl)thiazol-2-yl)pyrrolidin-1-yl)-2-oxoethyl)carbamate (4.9 g, 9.54 mmol) in dioxane (10 mL) was added HCl/dioxane (4 M, 50 mL) and the resulting mixture was stirred at 30° C. for 1 h. LCMS showed starting material was consumed and desired mass was detected. The reaction mixture was concentrated in vacuum to afford (2S)-2-amino-2-cyclohexyl-1-[(2S)-2-[4-(3-hydroxybenzoyl)thiazol-2-yl]pyrrolidin-1-yl]ethanone (4.7 g, crude, HCl salt) as a yellow oil, which was used in the next step directly.
MS (M+H)+=414.3
To a solution of (2S)-2-[tert-butoxycarbonyl(methyl)amino]propanoic acid (2.12 g, 10.44 mmol) in DMF (20 mL) was added DIPEA (4.05 g, 31.33 mmol, 5.46 mL) and HATU (4.77 g, 12.53 mmol), the mixture was stirred at 0° C. for 15 min and a solution of (2S)-2-amino-2-cyclohexyl-1-[(2S)-2-[4-(3-hydroxybenzoyl)thiazol-2-yl]pyrrolidin-1-yl]ethanone (4.7 g, 10.44 mmol, HCl salt) in DMF (20 mL) with DIPEA (8.10 g, 62.67 mmol, 10.92 mL) was added and the resulting mixture was stirred at 0° C. for 3 h. LCMS showed desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=2:1) indicated starting material remained and two new spots were detected. The reaction mixture was diluted with H2O (120 mL) and extracted with EtOAc (120 mL×3). The organic layer was washed with brine (120 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=8/1 to 1/1) to afford tert-butyl ((S)-1-(((S)-1-cyclohexyl-2-((R)-2-(4-(3-hydroxybenzoyl)thiazol-2-yl)pyrrolidin-1-yl)-2-oxoethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (40-Int-2) (1.3 g, 2.06 mmol, 19.75% yield, 95% purity) as a yellow oil, which is checked by SFC (retention time: 1.355, analysis method: “Column: Cellucoat 50×4.6 mm I.D., 3 μm Mobile phase: Phase A for C02, and Phase B for MeOH (0.05% DEA); Gradient elution: MeOH (0.05% DEA) in C02 from 5% to 40%; Flow rate: 3 mL/min; Detector: PDA; Column Temp: 35 C; Back Pressure: 100 Bar”) and tert-butyl ((S)-1-(((S)-1-cyclohexyl-2-((S)-2-(4-(3-hydroxybenzoyl)thiazol-2-yl)pyrrolidin-1-yl)-2-oxoethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (40-Int-1) (1.4 g, 2.15 mmol, 20.60% yield, 92% purity) as a yellow oil, which is checked by SFC (retention time: 1.406, analysis method: “Column: Cellucoat 50×4.6 mm I.D., 3 μm Mobile phase: Phase A for CO2, and Phase B for MeOH (0.05% DEA); Gradient elution: MeOH (0.05% DEA) in C02 from 5% to 40%; Flow rate: 3 mL/min; Detector: PDA; Column Temp: 35 C; Back Pressure: 100 Bar”).
To a mixture of tert-butyl ((S)-1-(((S)-1-cyclohexyl-2-((S)-2-(4-(3-hydroxybenzoyl)thiazol-2-yl)pyrrolidin-1-yl)-2-oxoethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (200 mg, 334.03 μmol) and 2,2-dimethyl-4-oxo-3,8,11-trioxa-5-azatridecan-13-yl 4-methylbenzenesulfonate (195.07 mg, 367.43 μmol) in DMF (4 mL) was added K2CO3 (92.33 mg, 668.06 μmol) in one portion at 30° C. under N2. The mixture was stirred at 50° C. for 16 h. LCMS showed the starting material was consumed completely and desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=1:3) indicated the starting material was consumed completely and one major new spot was detected. The reaction mixture was diluted with H2O (15 mL) and extracted with EtOAc (15 mL×3). The combined organic layer was dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=3/1 to 1/3) to afford tert-butyl ((S)-1-(((S)-1-cyclohexyl-2-((S)-2-(4-(3-((2,2-dimethyl-4-oxo-3,8,11-trioxa-5-azatridecan-13-yl)oxy)benzoyl)thiazol-2-yl)pyrrolidin-1-yl)-2-oxoethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (216 mg, 257.63 μmol, 77.13% yield, 99% purity) as a yellow oil. MS (M+H)+=830.4
To a mixture of tert-butyl ((S)-1-(((S)-1-cyclohexyl-2-((S)-2-(4-(3-((2,2-dimethyl-4-oxo-3,8,11-trioxa-5-azatridecan-13-yl)oxy)benzoyl)thiazol-2-yl)pyrrolidin-1-yl)-2-oxoethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (216.00 mg, 260.23 μmol) in dioxane (2 mL) was added HCl/dioxane (4 M, 4 mL) and the resulting mixture was stirred at 25° C. for 1 h. LCMS showed starting material was consumed and desired mass was detected. The reaction mixture was concentrated in vacuum to afford (2S)—N-[(1S)-2-[(2S)-2-[4-[3-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]benzoyl]thiazol-2-yl]pyrrolidin-1-yl]-1-cyclohexyl-2-oxo-ethyl]-2-(methylamino)propanamide (174 mg, crude, HCl salt) as a yellow solid.
MS (M+H)+=630.2
To a mixture of (2S)—N-[(1S)-2-[(2S)-2-[4-[3-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]benzoyl]thiazol-2-yl]pyrrolidin-1-yl]-1-cyclohexyl-2-oxo-ethyl]-2-(methylamino)propanamide (174 mg, 276.27 μmol, HCl salt) and [(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-[tert-butyl(dimethyl)silyl]oxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl](4-nitrophenyl) carbonate (167.38 mg, 276.27 μmol) in DMAC (3 mL) was added TEA (83.87 mg, 828.82 μmol, 115.36 μL) at 25° C. and the resulting mixture was stirred at 25° C. for 16 h. LCMS showed 63% desired mass was detected. The reaction mixture was diluted with H2O (12 mL) and extracted with EtOAc (12 mL×3). The organic layer was dried over Na2SO4, filtrated and concentrated in vacuum. The residue was purified by prep-HPLC (column: Unisil 3-100 C18 Ultra 150*50 mm*3 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 48%-78%, 10 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(3-(2-((S)-1-((S)-2-cyclohexyl-2-((S)-2-(methylamino)propanamido)acetyl)pyrrolidin-2-yl)thiazole-4-carbonyl)phenoxy)ethoxy)ethoxy)ethyl)carbamate (122.3 mg, 111.03 μmol, 40.19% yield, 99% purity) as a white solid, which is checked SFC (retention time: 0.952, method: “Column: Chiralpak AD-3 50×4.6 mm I.D., 3 μm; Mobile phase: Phase A for CO2, and Phase B for IPA (0.05% DEA); Gradient elution: 40% IPA (0.05% DEA) in CO2; Flow rate: 3 mL/min; Detector: PDA; Column Temp: 35 C; Back Pressure: 100 Bar”).
MS (M+H)+=1090.6
1H NMR (400 MHz, CDCl3) δ 8.11 (s, 1H), 7.80 (d, J=7.7 Hz, 1H), 7.71-7.61 (m, 2H), 7.37 (t, J=7.9 Hz, 1H), 7.19-7.09 (m, 1H), 5.96 (d, J=9.6 Hz, 1H), 5.76 (dd, J=9.6, 6.0 Hz, 1H), 5.56 (dd, J=7.9, 2.7 Hz, 1H), 5.50 (s, 1H), 5.27-5.18 (m, 2H), 4.64 (dd, J=9.1, 6.0 Hz, 2H), 4.30-4.25 (m, 1H), 4.18 (t, J=4.8 Hz, 2H), 3.99-3.73 (m, 5H), 3.72-3.67 (m, 2H), 3.64-3.60 (m, 2H), 3.57-3.49 (m, 2H), 3.43-3.27 (m, 2H), 2.63-2.55 (m, 2H), 2.47-2.40 (m, 5H), 2.36-2.26 (m, 4H), 2.23-2.14 (m, 4H), 2.09-2.04 (m, 4H), 1.91-1.84 (m, 2H), 1.75-1.70 (m, 4H), 1.38-1.29 (m, 5H), 1.19-0.98 (m, 9H), 0.89-0.87 (m, 12H), 0.07 (s, 6H).
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(3-(2-((S)-1-((S)-2-cyclohexyl-2-((S)-2-(methylamino)propanamido)acetyl)pyrrolidin-2-yl)thiazole-4-carbonyl)phenoxy)ethoxy)ethoxy)ethyl)carbamate (250 mg, 204.04 μmol) in ACN (5 mL) was added HF.Pyridine (612.11 μmol, 0.75 mL) in one portion at 15° C. The mixture was stirred at 15° C. for 2 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was concentrated in vacuum. The residue was purified by prep-HPLC (column: Phenomenex Luna C18 150*25 mm*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 23%-53%, 10 min). Compound (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(3-(2-((S)-1-((S)-2-cyclohexyl-2-((S)-2-(methylamino)propanamido)acetyl)pyrrolidin-2-yl)thiazole-4-carbonyl)phenoxy)ethoxy)ethoxy)ethyl)carbamate (42 mg, 37.80 μmol, 18.53% yield, 92% purity, FA salt) was obtained as an off-white solid, which is checked by SFC (retention time=3.566, SFC analysis method: “Column: (S,S)Whelk-01 100×4.6 mm I.D., 3.5 μm; Mobile phase: Phase A for CO2, and Phase B for EtOH (0.05% DEA); Gradient elution: 60% EtOH (0.05% DEA) in CO2; Flow rate: 3 mL/min; Detector: PDA; Column Temp: 35 C; Back Pressure: 100 Bar”).
MS (M+H)+=976.6
1H NMR (400 MHz, CDCl3) δ 8.12 (s, 1H), 7.81-7.77 (m, 1H), 7.77-7.68 (m, 2H), 7.38 (t, J=8.0 Hz, 1H), 7.17-7.11 (m, 1H), 5.95 (d, J=9.7 Hz, 1H), 5.76 (dd, J=9.7, 6.0 Hz, 1H), 5.54 (dd, J=7.8, 2.9 Hz, 1H), 5.50 (s, 1H), 5.28 (s, 1H), 5.22-5.14 (m, 1H), 4.69-4.52 (m, 2H), 4.31-4.24 (m, 1H), 4.22-4.13 (m, 2H), 3.95-3.80 (m, 4H), 3.76-3.65 (m, 3H), 3.65-3.59 (m, 2H), 3.58-3.49 (m, 2H), 3.39-3.31 (m, 2H), 2.67-2.59 (m, 2H), 2.50-2.46 (m, 3H), 2.44-2.38 (m, 3H), 2.35-2.30 (m, 3H), 2.27-2.19 (m, 3H), 2.15-2.04 (m, 3H), 1.97-1.86 (m, 2H), 1.85-1.77 (m, 2H), 1.74-1.68 (m, 4H), 1.44-1.29 (m, 5H), 1.21-0.95 (m, 9H), 0.87 (d, J=7.0 Hz, 3H).
In a manner similar to Step 11 of Example 31, 36, the titled compound (948 mg, 1.15 mmol, 57.41% yield, 94% purity) was obtained as a yellow oil.
MS (M+H)+=874.1
In a manner similar to Step 12 of Example 31, 36, the titled compound (771 mg, crude, HCl salt) was obtained as a yellow solid.
MS (M+H)+=674.2
In a manner similar to Step 13 of Example 31, 36, the titled compound (647 mg, 537.08 μmol, 49.48% yield, 98% purity, FA salt) was obtained as a white solid.
MS (M+H)+=1134.6
1H NMR (400 MHz, CDCl3) δ=8.11 (s, 1H), 7.81 (d, J=7.4 Hz, 1H), 7.70-7.63 (m, 2H), 7.38 (t, J=8.0 Hz, 1H), 7.16 (dd, J=2.0, 8.3 Hz, 1H), 5.97 (d, J=9.5 Hz, 1H), 5.78 (dd, J=6.0, 9.7 Hz, 1H), 5.56 (dd, J=2.6, 7.9 Hz, 1H), 5.51 (brs, 1H), 5.29-5.25 (m, 1H), 5.20 (brs, 1H), 4.65 (dd, J=6.0, 9.0 Hz, 2H), 4.29-4.26 (m, 1H), 4.20 (t, J=4.8 Hz, 2H), 3.92-3.86 (m, 3H), 3.75-3.71 (m, 2H), 3.69-3.65 (m, 2H), 3.65-3.58 (m, 4H), 3.56-3.50 (m, 2H), 3.46-3.38 (m, 1H), 3.35-3.22 (m, 2H), 2.60-2.55 (m, 2H), 2.46 (s, 3H), 2.41-2.27 (m, 12H), 1.88-1.85 (m, 2H), 1.81-1.60 (m, 9H), 1.46-1.32 (m, 4H), 1.27-0.98 (m, 9H), 0.89 (s, 9H), 0.08 (s, 6H)
In a manner similar to Step 14 of Example 31, 36, the titled compound (176.7 mg, 157.43 μmol, 25.44% yield, 95% purity, FA salt) was obtained as a white solid.
MS (M+H)+=1020.6
1H NMR (400 MHz, CDCl3) δ 8.10 (s, 1H), 8.00-7.59 (m, 3H), 7.38 (t, J=7.9 Hz, 1H), 7.18-7.12 (m, 1H), 5.95 (d, J=9.6 Hz, 1H), 5.76 (dd, J=9.6, 6.0 Hz, 1H), 5.55 (dd, J=7.6, 3.4 Hz, 1H), 5.50 (s, 1H), 5.33-5.25 (m, 1H), 5.19 (s, 1H), 4.62 (d, J=7.7 Hz, 2H), 4.32-4.25 (m, 1H), 4.23-4.15 (m, 2H), 3.90-3.75 (m, 5H), 3.73-3.68 (m, 2H), 3.67-3.64 (m, 2H), 3.63-3.57 (m, 4H), 3.54-3.47 (m, 2H), 3.37-3.29 (m, 2H), 2.69-2.53 (m, 5H), 2.44-2.31 (m, 4H), 2.27-2.03 (m, 4H), 1.97-1.61 (m, 12H), 1.48-1.30 (m, 5H), 1.21-0.95 (m, 9H), 0.87 (d, J=7.0 Hz, 3H).
In a manner similar to Step 11 of Example 31, 36, the titled compound (1.1 g, 1.19 mmol, 71.02% yield, 99% purity) was obtained as a yellow oil.
MS (M+H)+=918.1
In a manner similar to Step 12 of Example 31, 36, the titled compound (906 mg, crude, HCl salt) was obtained as a yellow oil.
MS (M+H)+=718.1
In a manner similar to Step 13 of Example 31, 36, the titled compound (726 mg, 603.67 μmol, 50.26% yield, 98% purity) was obtained as a white solid.
MS (M+H)+=1178.6
1H NMR (400 MHz, CDCl3) δ=8.10 (s, 1H), 7.80 (d, J=7.6 Hz, 1H), 7.72-7.66 (m, 2H), 7.38 (t, J=7.8 Hz, 1H), 7.16 (dd, J=2.2, 7.8 Hz, 1H), 5.97 (d, J=9.8 Hz, 1H), 5.78 (dd, J=6.1, 9.6 Hz, 1H), 5.57 (dd, J=2.6, 7.9 Hz, 1H), 5.49 (brs, 1H), 5.30-5.19 (m, 2H), 4.64 (dd, J=6.2, 9.0 Hz, 2H), 4.31-4.27 (m, 1H), 4.20 (t, J=4.7 Hz, 2H), 3.97-3.87 (m, 3H), 3.84-3.78 (m, 1H), 3.75-3.72 (m, 2H), 3.68 (m, 2H), 3.64 (s, 3H), 3.62-3.56 (m, 5H), 3.55-3.48 (m, 2H), 3.46-3.36 (m, 1H), 3.30-3.28 (m, 1H), 3.16-3.14 (m, 1H), 2.64-2.56 (m, 2H), 2.50-2.41 (m, 5H), 2.38-2.20 (m, 3H), 1.92-1.84 (m, 6H), 1.78-1.68 (m, 5H), 1.68-1.59 (m, 4H), 1.48-1.27 (m, 5H), 1.26-0.97 (m, 9H), 0.89 (s, 9H), 0.08 (s, 6H).
In a manner similar to Step 14 of Example 31, 36, the titled compound (21 mg, 19.34 μmol, 11.39% yield, 98% purity) was obtained as a white solid.
MS (M+H)+=1064.8
1H NMR (400 MHz, CDCl3) δ 8.11 (s, 1H), 7.83-7.66 (m, 3H), 7.37 (t, J=8.0 Hz, 1H), 7.18-7.12 (m, 1H), 5.95 (d, J=9.7 Hz, 1H), 5.76 (dd, J=9.7, 6.0 Hz, 1H), 5.54 (dd, J=8.0, 2.7 Hz, 1H), 5.50 (s, 1H), 5.34-5.16 (m, 2H), 4.66-4.57 (m, 2H), 4.29 (t, J=4.3 Hz, 1H), 4.19 (t, J=4.7 Hz, 2H), 3.98-3.74 (m, 5H), 3.75-3.69 (m, 2H), 3.67-3.64 (m, 2H), 3.64-3.61 (m, 4H), 3.61-3.56 (m, 4H), 3.55-3.46 (m, 2H), 3.37-3.29 (m, 2H), 2.71-2.54 (m, 2H), 2.49-2.41 (m, 2H), 2.39 (s, 3H), 2.36-2.27 (m, 2H), 2.25-2.15 (m, 2H), 2.15-2.07 (m, 2H), 2.06-1.94 (m, 2H), 1.92-1.79 (m, 4H), 1.77-1.69 (m, 6H), 1.40-1.28 (m, 5H), 1.20-0.99 (m, 9H), 0.88 (d, J=7.0 Hz, 3H).
To a mixture of tert-butyl N-[(1S)-2-[[(1S)-1-cyclohexyl-2-[(2R)-2-[4-(3-hydroxybenzoyl)thiazol-2-yl]pyrrolidin-1-yl]-2-oxo-ethyl]amino]-1-methyl-2-oxo-ethyl]-N-methyl-carbamate (1.5 g, 2.51 mmol) and 2-[2-[2-(tert-butoxycarbonylamino)ethoxy]ethoxy]ethyl 4-methylbenzenesulfonate (1.33 g, 2.51 mmol) in DMF (10 mL) was added K2CO3 (1.04 g, 7.52 mmol) and the resulting mixture was stirred at 50° C. for 16 h. LCMS showed the starting material was consumed completely and 78% desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=1:3) indicated the starting material was consumed completely and one major new spot was detected. The reaction mixture was diluted with H2O (30 mL) and extracted with EtOAc (30 mL×3). The combined organic layer was washed with brine (30 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=2/1 to 1/3) to afford tert-butyl ((S)-1-(((S)-1-cyclohexyl-2-((R)-2-(4-(3-((2,2-dimethyl-4-oxo-3,8,11-trioxa-5-azatridecan-13-yl)oxy)benzoyl)thiazol-2-yl)pyrrolidin-1-yl)-2-oxoethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (1.7 g, 1.93 mmol, 76.85% yield, 94% purity) as a yellow oil.
MS (M+H)+=830.1
To a mixture of tert-butyl ((S)-1-(((S)-1-cyclohexyl-2-((R)-2-(4-(3-((2,2-dimethyl-4-oxo-3,8,11-trioxa-5-azatridecan-13-yl)oxy)benzoyl)thiazol-2-yl)pyrrolidin-1-yl)-2-oxoethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (1.7 g, 2.05 mmol) in dioxane (10 mL) was added HCl/dioxane (4 M, 20 mL) and the resulting mixture was stirred at 25° C. for 1 h. LCMS showed starting material was consumed completely and 86% desired mass was detected. The reaction mixture was concentrated in vacuum to afford (2S)—N-[(1S)-2-[(2R)-2-[4-[3-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]benzoyl]thiazol-2-yl]pyrrolidin-1-yl]-1-cyclohexyl-2-oxo-ethyl]-2-(methylamino)propanamide (1.36 g, crude, HCl salt) as a yellow solid, which was used in the next step. MS (M+H)+=630.3
To a mixture of (2S)—N-[(1S)-2-[(2R)-2-[4-[3-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]benzoyl]thiazol-2-yl]pyrrolidin-1-yl]-1-cyclohexyl-2-oxo-ethyl]-2-(methylamino)propanamide (1.36 g, 2.16 mmol, HCl salt) and [(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-[tert-butyl(dimethyl)silyl]oxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl] (4-nitrophenyl) carbonate (1.30 g, 2.16 mmol) in DMAC (15 mL) was added TEA (655.52 mg, 6.48 mmol, 901.68 μL) in one portion at 25° C. and the resulting mixture was stirred at 25° C. for 16 h. LCMS showed the starting material was consumed completely and 70% desired mass was detected. The reaction was diluted with H2O (30 mL) and extracted with EtOAc (30 mL×3). The combined organic layer was dried over Na2SO4, filtrated and concentrated in vacuum. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 50%-80%, 11 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(3-(2-((R)-1-((S)-2-cyclohexyl-2-((S)-2-(methylamino)propanamido)acetyl)pyrrolidin-2-yl)thiazole-4-carbonyl)phenoxy)ethoxy)ethoxy)ethyl)carbamate (579.7 mg, 499.87 μmol, 23.15% yield, 98% purity, FA salt) as a white solid, which is checked by SFC (retention time: 1.368, analysis method: “Column: Chiralpak AD-3 50 jÁ4.6 mm I.D., 3 μm; Mobile phase: Phase A for CO2, and Phase B for IPA (0.05% DEA); Gradient elution: 40% IPA (0.05% DEA) in CO2; Flow rate: 3 mL/min; Detector: PDA; Column Temp: 35 C; Back Pressure: 100 Bar”).
MS (M+H)+=1090.6
1H NMR (400 MHz, CDCl3) δ 8.05 (s, 1H), 7.77 (d, J=7.5 Hz, 1H), 7.64 (s, 1H), 7.53-7.46 (m, 1H), 7.38 (t, J=8.0 Hz, 1H), 7.15 (dd, J=8.2, 2.5 Hz, 1H), 5.95 (d, J=9.6 Hz, 1H), 5.76 (dd, J=9.6, 6.0 Hz, 1H), 5.54-5.48 (m, 2H), 5.28-5.17 (m, 2H), 4.62 (t, J=8.9 Hz, 2H), 4.28 (t, J=3.7 Hz, 1H), 4.18 (t, J=4.8 Hz, 2H), 4.12 (t, J=8.3 Hz, 1H), 3.88-3.84 (m, 2H), 3.76-3.65 (m, 4H), 3.64-3.60 (m, 2H), 3.54 (d, J=5.3 Hz, 2H), 3.43-3.29 (m, 2H), 2.64-2.40 (m, 5H), 2.36-2.33 (m, 3H), 2.27-2.20 (m, 2H), 1.90-1.75 (m, 9H), 1.74-1.66 (m, 4H), 1.64-1.58 (m, 2H), 1.39-1.03 (m, 14H), 0.89-0.87 (m, 12H), 0.07 (s, 6H).
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(3-(2-((R)-1-((S)-2-cyclohexyl-2-((S)-2-(methylamino)propanamido)acetyl)pyrrolidin-2-yl)thiazole-4-carbonyl)phenoxy)ethoxy)ethoxy)ethyl)carbamate (201 mg, 184.32 μmol) in ACN (3 mL) was added HF.Pyridine (552.96 mol, 0.6 mL) at 0° C. The mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was concentrated in vacuum. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 24%-54%, 10 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(3-(2-((R)-1-((S)-2-cyclohexyl-2-((S)-2-(methylamino)propanamido)acetyl)pyrrolidin-2-yl)thiazole-4-carbonyl)phenoxy)ethoxy)ethoxy)ethyl)carbamate (72.8 mg, 69.79 μmol, 37.86% yield, 98% purity, FA salt) as a white solid, which is checked by SFC (retention time=2.780, SFC analysis method: “Column: (S,S)Whelk-O1 100×4.6 mm I.D., 3.5 μm Mobile phase: Phase A for CO2, and Phase B for EtOH (0.05% DEA); Gradient elution: 60% EtOH (0.05% DEA) in CO2, Flow rate: 3 mL/min; Detector: PDA, Column Temp: 35 C; Back Pressure: 100 Bar”).
MS (M+H)+=976.6
1H NMR (400 MHz, CDCl3) δ 8.05 (s, 1H), 7.79-7.58 (m, 3H), 7.40-7.34 (m, 1H), 7.18-7.11 (m, 1H), 5.95 (d, J=9.6 Hz, 1H), 5.76 (dd, J=9.7, 6.0 Hz, 1H), 5.51 (d, J=9.8 Hz, 2H), 5.24 (d, J=39.6 Hz, 2H), 4.61 (t, J=8.9 Hz, 2H), 4.29-4.17 (m, 3H), 4.15-4.07 (m, 1H), 3.88-3.82 (m, 2H), 3.74-3.65 (m, 4H), 3.65-3.52 (m, 4H), 3.39-3.31 (m, 2H), 2.66-2.59 (m, 2H), 2.49-2.41 (m, 3H), 2.41-2.37 (m, 2H), 2.35-2.29 (m, 2H), 2.26-2.18 (m, 2H), 2.17-2.00 (m, 4H), 1.94-1.84 (m, 2H), 1.84-1.74 (m, 4H), 1.74-1.67 (m, 4H), 1.38-1.30 (m, 5H), 1.24-0.96 (m, 9H), 0.87 (d, J=7.0 Hz, 3H).
To a solution of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (325.95 mg, 0.26 mmol) and N-[2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethyl]aniline (70 mg, 0.26 mmol) in pyridine (0.5 mL) was added DMAP (223.07 mg, 1.83 mmol) and the mixture was stirred at 25° C. for 16 h. LCMS showed a peak (14.7%) with desired mass. The mixture was concentrated under vacuum. The residue was purified by prep-HPLC (column: Phenomenex Synergi C18 150*25*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 75%-100%, 10 min) followed by lyophilization to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(2-(phenylamino)ethoxy)ethoxy)ethoxy)ethyl)carbamate (9.1 mg, 0.011 mmol, 4.46% yield, 93.2% purity) as yellow oil and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl(2-(2-(2-(2-(phenylamino)ethoxy)ethoxy)ethoxy)ethyl)carbamate (90 mg, 123.45 μmol, 47.33% yield, 93.2% purity) as yellow oil.
MS (M+H)+=729.6
1H NMR (400 MHz, DMSO-d6) δ 7.10-7.02 (m, 2H), 6.99 (t, J=5.7 Hz, 1H), 6.57 (dd, J=0.9, 8.5 Hz, 2H), 6.54-6.47 (m, 1H), 5.91 (d, J=9.7 Hz, 1H), 5.76 (dd, J=6.5, 8.8 Hz, 1H), 5.51-5.42 (m, 2H), 5.05 (d, J=2.81 Hz, 1H), 4.48-4.47 (m, 1H), 4.33-4.25 (m, 1H), 3.57-3.43 (m, 10H), 3.39-3.34 (m, 2H), 3.16 (q, J=5.8 Hz, 2H), 3.12-3.02 (m, 2H), 2.72-2.64 (m, 1H), 2.40-2.29 (m, 2H), 2.23-2.20 (m, 1H), 1.88-1.75 (m, 3H), 1.73-1.59 (m, 3H), 1.48 (t, J=11.6 Hz, 1H), 1.38-1.21 (m, 2H), 1.03 (d, J=7.3 Hz, 3H), 0.89-0.80 (m, 12H), 0.08-0.06 (m, 6H).
A mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(2-(phenylamino)ethoxy)ethoxy)ethoxy)ethyl)carbamate (90 mg, 0.12 mmol) in formic acid (2.44 g, 42.41 mmol, 2.00 mL, 80% purity) was stirred at 25° C. for 30 min. LCMS showed a main peak with desired mass and a little starting material remained. The mixture was stirred at 25° C. for 30 min. The mixture was concentrated under vacuum. The residue was purified by prep-HPLC (column: Phenomenex Synergi C18 150*25*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 37%-67%, 10 min) followed by lyophilization to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-(2-(phenylamino)ethoxy)ethoxy)ethoxy)ethyl)carbamate (37.8 mg, 0.057 mmol, 46.72% yield, 93.8% purity) as yellow oil.
MS (M+H)+=615.4
1H NMR (400 MHz, DMSO-d6) δ 7.09-7.02 (m, 2H), 6.99 (t, J=5.6 Hz, 1H), 6.57 (dd, J=0.9, 8.5 Hz, 2H), 6.51 (t, J=7.21 Hz, 1H), 5.91 (d, J=9.5 Hz, 1H), 5.76 (dd, J=5.9, 9.4 Hz, 1H), 5.49-5.42 (m, 2H), 5.18 (d, J=3.30 Hz, 1H), 5.05 (d, J=3.0 Hz, 1H), 4.49-4.46 (m, 1H), 4.15-4.05 (m, 1H), 3.57-3.32 (m, 12H), 3.16-3.14 (m, 2H), 3.09-3.05 (m, 2H), 2.62-2.60 (m, 1H), 2.41 (m, 2H), 2.36 (d, J=3.5 Hz, 1H), 1.89-1.77 (m, 3H), 1.72-1.57 (m, 3H), 1.50-1.40 (m, 1H), 1.38-1.20 (m, 2H), 1.03 (d, J=7.3 Hz, 3H), 0.83 (d, J=6.9 Hz, 3H).
A mixture of [(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-[tert-butyl(dimethyl)silyl]oxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl] (4-nitrophenyl) carbonate (0.3 g, 0.50 mmol), 4-[2-[2-(2-aminoethoxy)ethoxy]ethylamino]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (0.3 g, 680.46 μmol, HCl salt) and DMAP (0.43 g, 3.52 mmol, 7.04 eq) in pyridine (3 mL) was stirred at 25° C. for 16 h. LCMS showed a main peak with desired mass. The mixture was concentrated. The residue was purified by prep-HPLC (column: Phenomenex Synergi Max-RP 150*50 mm*10 μm; mobile phase: [water (0.2% FA)-ACN]; B %: 3%-33%, 11 min) followed by lyophilization to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (19.4 mg, 0.021 mmol, 4.37% yield, 97.5% purity) as yellow solid and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl(2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (100 mg, 0.115 mmol, 23.11% yield, 98% purity) as yellow solid.
MS (M+H)+=865.4
1H NMR (400 MHz, DMSO-d6) δ 11.08 (s, 1H), 7.58 (dd, J=8.5, 7.1 Hz, 1H), 7.13 (d, J=8.6 Hz, 1H), 7.04 (d, J=7.0 Hz, 1H), 6.97 (t, J=5.7 Hz, 1H), 6.59 (t, J=5.8 Hz, 1H), 5.90 (d, J=9.6 Hz, 1H), 5.74 (dd, J=9.6, 5.9 Hz, 1H), 5.45 (s, 1H), 5.12-4.96 (m, 2H), 4.53-4.41 (m, 1H), 4.33-4.21 (m, 1H), 3.60 (t, J=5.4 Hz, 2H), 3.57-3.41 (m, 6H), 3.37 (t, J=6.2 Hz, 2H), 3.29 (s, 2H), 3.09 (p, J=6.5 Hz, 2H), 2.94-2.82 (m, 1H), 2.70 (d, J=4.3 Hz, 1H), 2.62-2.55 (m, 1H), 2.40-2.36 (m, 1H), 2.23 (d, J=11.7 Hz, 1H), 2.08-1.97 (m, 1H), 1.88-1.75 (m, 3H), 1.75-1.58 (m, 3H), 1.54-1.43 (m, 1H), 1.39-1.21 (m, 2H), 1.03 (d, J=7.4 Hz, 3H), 0.85-0.82 (m, 12H), 0.05 (s, 6H).
A mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (95 mg, 109.81 μmol) in FA (109.81 μmol, 10 mL, 80% purity) was stirred at 25° C. for 1 h. LCMS showed a main peak (68%) with desired mass. The mixture was concentrated under vacuum. The residue was purified by prep-HPLC (column: Phenomenex Synergi C18 150*25*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 48%-78%, 9 min) followed by lyophilization to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (64.9 mg, 0.084 mmol, 76.11% yield, 96.7% purity) as yellow solid.
MS (M+H)+=751.4
1H NMR (400 MHz, DMSO-d6) δ 11.08 (s, 1H), 7.61-7.55 (m, 1H), 7.13 (d, J=8.6 Hz, 1H), 7.04 (d, J=7.09 Hz, 1H), 6.98 (t, J=5.4 Hz, 1H), 6.59 (t, J=5.6 Hz, 1H), 5.90 (d, J=9.54 Hz, 1H), 5.79-5.71 (m, 1H), 5.45 (brs, 1H), 5.17 (d, J=3.1 Hz, 1H), 5.09-5.01 (m, 2H), 4.48-4.46 (m, 1H), 4.09 (m, 1H), 3.63-3.58 (m, 2H), 3.56-3.42 (m, 6H), 3.40-3.37 (m, 2H), 3.13-3.05 (m, 2H), 2.94-2.82 (m, 1H), 2.65-2.53 (m, 3H), 2.41 (s, 1H), 2.36 (s, 1H), 2.22 (d, J=10.7 Hz, 1H), 2.07 (s, 1H), 2.05-1.98 (m, 1H), 1.86-1.75 (m, 3H), 1.70-1.57 (m, 3H), 1.49-1.23 (m, 1H), 1.36-1.21 (m, 2H), 1.02 (d, J=7.2 Hz, 3H), 0.83 (d, J=6.9 Hz, 3H).
In a manner similar to Step 1 of Example 40, 46, the titled compound (0.13 g, 0.14 mmol, 28.66% yield, 99.1% purity) was obtained as a white solid.
MS (M+H)+=909.5
1H NMR (400 MHz, DMSO-d6) δ 11.09 (s, 1H), 7.58 (dd, J=8.6, 7.0 Hz, 1H), 7.14 (d, J=8.6 Hz, 1H), 7.04 (d, J=7.0 Hz, 1H), 6.97 (t, J=5.7 Hz, 1H), 6.60 (t, J=5.8 Hz, 1H), 5.90 (d, J=9.6 Hz, 1H), 5.75 (dd, J=9.6, 5.9 Hz, 1H), 5.46 (d, J=3.8 Hz, 1H), 5.10-4.99 (m, 2H), 4.55-4.42 (m, 1H), 4.32-4.25 (m, 1H), 3.61 (t, J=5.4 Hz, 2H), 3.58-3.53 (m, 2H), 3.53-3.50 (m, 2H), 3.50-3.42 (m, 6H), 3.38-3.34 (m, 2H), 3.15-3.01 (m, 2H), 2.95-2.81 (m, 1H), 2.72-2.64 (m, 1H), 2.58-2.53 (m, 1H), 2.36-2.30 (m, 2H), 2.23 (d, J=12.2 Hz, 1H), 2.06-1.98 (m, 1H), 1.90-1.75 (m, 3H), 1.75-1.60 (m, 3H), 1.54-1.42 (m, 1H), 1.41-1.17 (m, 2H), 1.03 (d, J=7.3 Hz, 3H), 0.88-0.79 (m, 12H), 0.05 (s, 6H).
In a manner similar to Step 2 of Example 40, 46, the titled compound (71.5 mg, 0.086 mmol, 60.58% yield, 96.3% purity) was obtained as a yellow solid.
MS (M+H)+=795.4
1H NMR (400 MHz, DMSO-d6) δ 11.08 (s, 1H), 7.61-7.55 (m, 1H), 7.14 (d, J=8.6 Hz, 1H), 7.04 (d, J=6.9 Hz, 1H), 6.98 (t, J=5.4 Hz, 1H), 6.60 (t, J=5.9 Hz, 1H), 5.90 (d, J=9.6 Hz, 1H), 5.75 (dd, J=6.1, 9.3 Hz, 1H), 5.45 (brs, 1H), 5.17 (d, J=2.9 Hz, 1H), 5.10-4.99 (m, 2H), 4.49-4.46 (m, 1H), 4.09-4.06 (m, 1H), 3.63-3.59 (m, 2H), 3.57-3.44 (m, 12H), 3.11-3.05 (m, 2H), 2.93-2.82 (m, 1H), 2.65-2.54 (m, 3H), 2.41 (m, 1H), 2.34 (m, 2H), 2.06-1.97 (m, 1H), 1.88-1.74 (m, 3H), 1.72-1.56 (m, 3H), 1.49-1.28 (m, 1H), 1.36-1.21 (m, 2H), 1.02 (d, J=7.2 Hz, 3H), 0.83 (d, J=6.9 Hz, 3H).
In a manner similar to Step 1 of Example 40, 46, the titled compound (50 mg, 51.46 μmol, 10.31% yield, 98.1% purity) was obtained as a yellow solid.
MS (M+H)+=953.3.
1H NMR (400 MHz, DMSO-d6) δ=11.09 (s, 1H), 7.58-7.56 (m, 1H), 7.14 (d, J=8.6 Hz, 1H), 7.07-7.02 (m, 1H), 6.98 (t, J=5.7 Hz, 1H), 6.64-6.57 (m, 1H), 5.90 (d, J=9.6 Hz, 1H), 5.75 (dd, J=9.5 Hz, 5.9 Hz, 1H), 5.45 (s, 1H), 5.11-4.98 (m, 2H), 4.53-4.41 (m, 1H), 4.33-4.24 (m, 1H), 3.64-3.59 (m, 2H), 3.58-3.54 (m, 2H), 3.54-3.43 (m, 12H), 3.50-3.30 (m, 2H), 3.15-3.00 (m, 2H), 2.94-2.81 (m, 1H), 2.73-2.58 (m, 2H), 2.57-2.54 (m, 1H), 2.40-2.31 (m, 3H), 2.23 (d, J=11.8 Hz, 1H), 2.06-1.98 (m, 1H), 1.90-1.76 (m, 3H), 1.74-1.60 (m, 3H), 1.53-1.42 (m, 1H), 1.36-1.22 (m, 2H), 1.07-0.99 (m, 3H), 0.83-0.84 (m, 12H), 0.08-0.05 (m, 6H).
In a manner similar to Step 2 of Example 40, 46, the titled compound (26.6 mg, 0.03 mmol, 57.91% yield, 95.8% purity) was obtained as a yellow solid.
MS (M+H)+=839.5
1H NMR (400 MHz, DMSO-d6) δ 11.09 (s, 1H), 7.64 (dd, J=7.2, 8.4 Hz, 1H), 7.15 (d, J=8.6 Hz, 1H), 7.04 (d, J=7.0 Hz, 1H), 6.99 (t, J=5.5 Hz, 1H), 6.60 (t, J=5.7 Hz, 1H), 5.90 (d, J=9.6 Hz, 1H), 5.76 (dd, J=6.0, 9.5 Hz, 1H), 5.46 (brs, 1H), 5.17 (d, J=3.3 Hz, 1H), 5.08-5.01 (m, 2H), 4.48 (brs, 1H), 4.09 (m, 1H), 3.65-3.59 (m, 2H), 3.58-3.43 (m, 16H), 3.13-3.04 (m, 2H), 2.94-2.83 (m, 1H), 2.65-2.55 (m, 4H), 2.41-2.39 (m, 1H), 2.36 (m, 1H), 2.23 (d, J=10.0 Hz, 1H), 2.06-1.97 (m, 1H), 1.88-1.76 (m, 3H), 1.72-1.56 (m, 3H), 1.48-1.40 (m, 1H), 1.37-1.21 (m, 2H), 1.03 (d, J=7.4 Hz, 3H), 0.83 (d, J=6.9 Hz, 3H).
In a manner similar to Step 1 of Example 40, 46, the titled compound (180 mg, 0.18 mmol, 27.15% yield, 98.9% purity) was obtained as a yellow solid.
MS (M+H)+=997.6
1H NMR (400 MHz, DMSO-d6) δ 11.09 (s, 1H), 7.61-7.55 (m, 1H), 7.15 (d, J=8.5 Hz, 1H), 7.04 (d, J=7.0 Hz, 1H), 6.98 (t, J=5.0 Hz, 1H), 6.60 (t, J=5.6 Hz, 1H), 5.90 (d, J=9.5 Hz, 1H), 5.79-5.72 (m, 1H), 5.46 (brs, 1H), 5.11-4.99 (m, 2H), 4.46-4.43 (m, 1H), 4.29 (s, 1H), 3.62 (t, J=5.3 Hz, 2H), 3.59-3.43 (m, 18H), 3.39-3.33 (m, 2H), 3.15-3.01 (m, 2H), 2.95-2.82 (m, 1H), 2.72-2.65 (m, 1H), 2.63-2.56 (m, 2H), 2.40-2.29 (m, 1H), 2.23 (d, J=10.5 Hz, 1H), 2.06-1.98 (m, 1H), 1.89-1.60 (m, 7H), 1.53-1.19 (m, 2H), 1.03 (d, J=7.1 Hz, 3H), 0.77-0.90 (m, 12H), 0.08-0.06 (m, 6H).
In a manner similar to Step 1 of Example 40, 46, the titled compound (157.0 mg, 0.174 mmol, 96.34% yield, 97.8% purity) was obtained as a yellow solid.
MS (M+H)+=883.5
1H NMR (400 MHz, DMSO-d6) δ 11.09 (s, 1H), 7.58 (dd, J=7.2, 8.4 Hz, 1H), 7.14 (d, J=8.6 Hz, 1H), 7.04 (d, J=7.0 Hz, 1H), 6.99 (t, J=5.4 Hz, 1H), 6.60 (t, J=5.7 Hz, 1H), 5.90 (d, J=9.8 Hz, 1H), 5.80-5.72 (m, 1H), 5.46 (brs, 1H), 5.18 (brs, 1H), 5.10-5.00 (m, 2H), 4.54-4.43 (m, 1H), 4.13-4.07 (m, 1H), 3.65-3.59 (m, 2H), 3.58-3.44 (m, 22H), 3.13-3.04 (m, 2H), 2.95-2.65 (m, 1H), 2.64-2.54 (m, 2H), 2.41 (m, 1H), 2.36 (m, 1H), 2.23 (d, J=10.3 Hz, 1H), 2.06-1.99 (m, 1H), 1.88-1.77 (m, 3H), 1.72-1.56 (m, 3H), 1.49 (m, 1H), 1.37-1.22 (m, 2H), 1.02 (d, J=7.6 Hz, 3H), 0.83 (d, J=6.9 Hz, 3H).
In a manner similar to Step 1 of Example 40, 46, the titled compound (0.24 g, 0.23 mmol, 33.46% yield, 99.5% purity) was obtained as a yellow solid.
MS (M+H)+=1041.6
1H NMR (400 MHz, DMSO-d6) δ 11.09 (s, 1H), 7.58 (dd, J=7.2, 8.6 Hz, 1H), 7.14 (d, J=8.6 Hz, 1H), 7.04 (d, J=7.0 Hz, 1H), 6.98 (t, J=5.8 Hz, 1H), 6.60 (t, J=6.0 Hz, 1H), 5.90 (d, J=9.8 Hz, 1H), 5.77-5.74 (m, 1H), 5.46 (brs, 1H), 5.10-5.00 (m, 2H), 4.47-4.46 (m, 1H), 4.32-4.29 (m, 1H), 3.64-3.60 (m, 2H), 3.58-3.52 (m, 5H), 3.51-3.44 (m, 20H), 3.11-3.04 (m, 2H), 2.93-2.83 (m, 1H), 2.71-2.67 (m, 1H), 2.60-2.57 (m, 1H), 2.58-2.56 (m, 1H), 2.39-2.34 (m, 1H), 2.23 (d, J=10.8 Hz, 1H), 2.03-2.00 (m, 1H), 1.86-1.76 (m, 3H), 1.72-1.59 (m, 3H), 1.47 (t, J=12.2 Hz, 1H), 1.38-1.21 (m, 2H), 1.03 (d, J=7.4 Hz, 3H), 0.90-0.84 (m, 12H), 0.08-0.06 (m, 6H).
In a manner similar to Step 1 of Example 40, 46, the titled compound (65.8 mg, 0.068 mmol, 29.56% yield, 99% purity) was obtained as a yellow solid.
MS (M+H)+=927.5
1H NMR (400 MHz, DMSO-d6) δ 11.10 (s, 1H), 7.58 (dd, J=7.2, 8.4 Hz, 1H), 7.15 (d, J=8.6 Hz, 1H), 6.98-7.07 (m, 2H), 6.61 (t, J=5.6 Hz, 1H), 5.91 (d, J=9.8 Hz, 1H), 5.80-5.76 (m, 1H), 5.46 (brs, 1H), 5.18 (d, J=3.0 Hz, 1H), 5.09-5.02 (m, 2H), 4.56-4.41 (m, 1H), 4.09-4.05 (m, 1H), 3.64-3.59 (m, 2H), 3.58-3.51 (m, 5H), 3.51-3.44 (m, 20H), 3.14-3.04 (m, 2H), 2.95-2.81 (m, 1H), 2.67-2.53 (m, 2H), 2.43-2.30 (m, 3H), 2.23 (d, J=13.0 Hz, 1H), 2.06-1.98 (m, 1H), 1.88-1.77 (m, 3H), 1.72-1.56 (m, 3H), 1.49 (d, J=11.6 Hz, 1H), 1.36-1.20 (m, 2H), 1.03 (d, J=7.4 Hz, 3H), 0.83 (d, J=6.8 Hz, 3H).
To the solution of 2-(2,6-dioxo-3-piperidyl)-4-fluoro-isoindoline-1,3-dione (1 g, 3.62 mmol) and tert-butyl N-(5-aminopentyl)carbamate (732.36 mg, 3.62 mmol, 753.46 μL) in DMF (10 mL) was added DIPEA (935.80 mg, 7.24 mmol, 1.26 mL) and the resulting mixture was stirred at 90° C. for 12 hr. LCMS showed 49% desired mass was detected. The mixture was poured into H2O (50 mL) and extracted with EtOAc (50 mL×3). The combined organic layer was washed with brine (50 mL) and concentrated. The residue was purified by silica gel column (Petroleum ether:Ethyl acetate=1:0-1:1) to afford tert-butyl N-[5-[[2-(2,6-dioxo-3-piperidyl)-1,3-dioxo-isoindolin-4-yl]amino]pentyl]carbamate (1.3 g, 1.76 mmol, 48.56% yield, 62% purity) as yellow oil MS (M+H)+=459.3
To a solution of tert-butyl N-[5-[[2-(2,6-dioxo-3-piperidyl)-1,3-dioxo-isoindolin-4-yl]amino]pentyl]carbamate (1.0 g, 2.18 mmol) in dioxane (10 mL) was added HCl/dioxane (4 M, 9.09 mL). The mixture was stirred at 25° C. for 3 hr. LCMS showed starting material was consumed and 83% desired mass was detected. The mixture was concentrated under vacuum. The residue was purified by reverse HPLC (FA). Compound 4-(5-aminopentylamino)-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (540 mg, 1.51 mmol, 69.08% yield, 100% purity) was obtained as a yellow oil.
MS (M+H)+=359.2
To the solution of 4-(5-aminopentylamino)-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (540 mg, 1.51 mmol, HCl salt) and [(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-[tert-butyl(dimethyl)silyl]oxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl] (4-nitrophenyl) carbonate (994.09 mg, 1.66 mmol) in DMF (10 mL) was added TEA (457.40 mg, 4.52 mmol, 629.16 μL) and the resulting mixture was stirred at 25° C. for 12 hr. LCMS showed that starting material was consumed and 57% desired mass was detected. The mixture was poured into water (50 mL) and extracted with EtOAc (50 mL×3). The combined organic layer was washed with brine (50 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 75%-100%, 11 min). Compound (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (5-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)pentyl)carbamate (550 mg, 664.78 μmol, 44.12% yield, 99% purity) was obtained as yellow solid.
MS (M+H)+=819.4
1H NMR (400 MHz, CDCl3) δ=8.00 (brs, 1H), 7.50 (dd, J=7.3, 8.4 Hz, 1H), 7.10 (d, J=7.1 Hz, 1H), 6.88 (d, J=8.4 Hz, 1H), 6.24-6.21 (m, 1H), 5.98 (d, J=9.7 Hz, 1H), 5.78 (dd, J=6.0, 9.4 Hz, 1H), 5.53 (brs, 1H), 5.17 (brs, 1H), 4.99-4.82 (m, 2H), 4.75-4.55 (m, 1H), 4.35-4.23 (m, 1H), 3.26 (q, J=6.8 Hz, 3H), 3.16-3.04 (m, 1H), 2.96-2.69 (m, 3H), 2.66-2.50 (m, 2H), 2.47-2.30 (m, 2H), 2.26 (d, J=12.2 Hz, 1H), 2.18-2.08 (m, 2H), 1.91-1.79 (m, 3H), 1.73-1.62 (m, 4H), 1.60-1.52 (m, 3H), 1.44-1.22 (m, 3H), 1.08 (d, J=7.3 Hz, 3H), 0.94-0.85 (m, 12H), 0.08-0.06 (m, 6H).
To a stirred solution of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (5-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)pentyl)carbamate (0.3 g, 366.27 μmol) in THE (10 mL) was added a premixed solution of TBAF (1 M, 1.47 mL) and AcOH (105.58 mg, 1.76 mmol, 100.55 μL) and the resulting solution was heated at 25° C. for 12 h. LCMS showed that 94% desired mass was detected. The mixture was poured into water (50 mL) and extracted with EtOAc (50 mL×3). The combined organic layer was washed with brine (100 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by silica gel column (Petroleum ether:Ethyl acetate=1:1-0:1) twice. Compound (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (5-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)pentyl)carbamate (93 mg, 127.99 μmol, 34.94% yield, 97% purity) was obtained as yellow solid.
MS (M+H)+=705.6
1H NMR (400 MHz, CDCl3) δ=8.14 (brs, 1H), 7.50 (dd, J=7.2, 8.3 Hz, 1H), 7.10 (d, J=7.1 Hz, 1H), 6.89 (d, J=8.6 Hz, 1H), 6.25-6.23 (m, 1H), 5.99 (d, J=9.5 Hz, 1H), 5.84-5.74 (m, 1H), 5.53 (brs, 1H), 5.21 (brs, 1H), 4.95-4.89 (m, 1H), 4.84 (brs, 1H), 4.69-4.59 (m, 1H), 4.32 (d, J=4.0 Hz, 1H), 3.32-3.10 (m, 4H), 2.93-2.68 (m, 4H), 2.62-2.55 (m, 1H), 2.48-2.35 (m, 2H), 2.26 (d, J=9.7 Hz, 1H), 2.18-2.05 (m, 2H), 1.99-1.81 (m, 3H), 1.77-1.65 (m, 5H), 1.54 (d, J=7.0 Hz, 3H), 1.47-1.36 (m, 4H), 1.08 (d, J=7.3 Hz, 3H), 0.90 (d, J=7.0 Hz, 3H).
In a manner similar to Step 1 of Example 51, 58, the titled compound (1.04 g, 2.20 mmol, 60.79% yield) was obtained as a yellow oil.
MS (M+H)+=473.2
In a manner similar to Step 2 of Example 51, 58, the titled compound (590 mg, 1.24 mmol, 56.38% yield, 86% purity, HCl) was obtained as a yellow oil.
MS (M+H)+=373.2
In a manner similar to Step 3 of Example 51, 58, the titled compound (0.5 g, 594.17 μmol, 41.18% yield, 99% purity) was obtained as a yellow solid.
MS (M+H)+=833.4
1H NMR (400 MHz, CDCl3) δ=8.00 (brs, 1H), 7.52 (dd, J=7.3, 8.4 Hz, 1H), 7.11 (d, J=7.0 Hz, 1H), 6.89 (d, J=8.6 Hz, 1H), 6.24 (t, J=5.4 Hz, 1H), 6.00 (d, J=9.8 Hz, 1H), 5.85-5.75 (m, 1H), 5.54 (brs, 1H), 5.20 (brs, 1H), 4.97-4.90 (m, 1H), 4.85 (brs, 1H), 4.66 (brs, 1H), 4.30 (t, J=3.5 Hz, 1H), 3.25 (q, J=6.7 Hz, 3H), 3.20-3.10 (m, 1H), 2.96-2.70 (m, 3H), 2.66-2.52 (m, 2H), 2.50-2.34 (m, 2H), 2.27 (d, J=10.1 Hz, 1H), 2.19-2.10 (m, 2H), 1.92-1.80 (m, 3H), 1.74-1.63 (m, 4H), 1.55-1.32 (m, 8H), 1.10 (d, J=7.3 Hz, 3H), 0.94-0.89 (m, 12H), 0.08-0.06 (m, 6H).
In a manner similar to Step 4 of Example 51, 58, the titled compound (48 mg, 65.44 μmol, 18.17% yield, 98% purity) was obtained as a yellow solid.
MS (M+H)+=719.6
1H NMR (400 MHz, CDCl3) δ=8.17 (brs, 1H), 7.50-7.34 (m, 1H), 7.02 (d, J=7.2 Hz, 1H), 6.81 (d, J=8.6 Hz, 1H), 6.14 (t, J=5.4 Hz, 1H), 5.90 (d, J=9.8 Hz, 1H), 5.75-5.65 (m, 1H), 5.45 (brs, 1H), 5.14 (brs, 1H), 4.90-4.81 (m, 1H), 4.73 (d, J=4.4 Hz, 1H), 4.56 (brs, 1H), 4.25 (brs, 1H), 3.24-3.03 (m, 4H), 2.86-2.60 (m, 4H), 2.55-2.46 (m, 1H), 2.41-2.25 (m, 3H), 2.18 (d, J=10.0 Hz, 1H), 2.10-1.96 (m, 2H), 1.92-1.72 (m, 3H), 1.69-1.55 (m, 4H), 1.48-1.24 (m, 8H), 1.00 (d, J=7.2 Hz, 3H), 0.82 (d, J=7.0 Hz, 3H).
To the solution of heptane-1,7-diamine (9 g, 69.11 mmol) in DCM (450 mL) was added Boc2O (4.52 g, 20.73 mmol, 4.76 mL) in DCM (90 mL) and the resulting mixture was stirred at 25° C. for 12 hr. TLC (Dichloromethane:Methanol:NH3.H2O=10/1/0.01) showed some of starting material was consumed and new spot was detected. The mixture was concentrated. The residue was purified by base Al2O3 column (Ethyl acetate). Compound tert-butyl N-(7-aminoheptyl)carbamate (4 g, 17.37 mmol, 25.13% yield) was obtained as yellow oil.
In a manner similar to Step 1 of Example 51, 58, the titled compound (1.1 g, 1.09 mmol, 14.99% yield, 48% purity) was obtained as a yellow oil.
MS (M+H)+=487.1
In a manner similar to Step 2 of Example 51, 58, the titled compound (0.49 g, 1.14 mmol, 65.77% yield, 98% purity, HCl salt) was obtained as a yellow oil.
MS (M+H)+=387.2
In a manner similar to Step 3 of Example 51, 58, the titled compound (480.2 mg, 561.19 μmol, 44.26% yield, 99% purity) was obtained as a yellow solid.
MS (M+H)+=847.5
1H NMR (400 MHz, CDCl3) δ=7.99 (brs, 1H), 7.50 (t, J=7.8 Hz, 1H), 7.10 (d, J=7.1 Hz, 1H), 6.89 (d, J=8.3 Hz, 1H), 6.23 (brs, 1H), 5.98 (d, J=9.5 Hz, 1H), 5.87-5.72 (m, 1H), 5.53 (brs, 1H), 5.19 (brs, 1H), 4.92 (dd, J=5.4, 12.2 Hz, 1H), 4.82 (brs, 1H), 4.66 (brs, 1H), 4.29 (brs, 1H), 3.26 (q, J=6.7 Hz, 3H), 3.08-3.04 (m, 1H), 2.94-2.69 (m, 3H), 2.64-2.51 (m, 2H), 2.48-2.32 (m, 2H), 2.25 (d, J=12.5 Hz, 1H), 2.19-2.08 (m, 2H), 1.93-1.71 (m, 4H), 1.71-1.60 (m, 4H), 1.52-1.23 (m, 10H), 1.08 (d, J=7.6 Hz, 3H), 0.92-0.87 (m, 12H), 0.08 (s, 6H).
In a manner similar to Step 4 of Example 51, 58, the titled compound (212.7 mg, 287.33 μmol, 60.85% yield, 99% purity) was obtained as a yellow solid.
MS (M+H)+=733.5
1H NMR (400 MHz, CDCl3) δ=8.16 (d, J=15.5 Hz, 1H), 7.51 (t, J=7.8 Hz, 1H), 7.10 (d, J=6.7 Hz, 1H), 6.89 (d, J=8.4 Hz, 1H), 6.23 (brs, 1H), 5.99 (d, J=9.7 Hz, 1H), 5.86-5.73 (m, 1H), 5.53 (brs, 1H), 5.22-5.21 (m, 1H), 4.92 (d, J=11.9 Hz, 1H), 4.79-4.76 (m, 1H), 4.64 (brs, 1H), 4.33 (brs, 1H), 3.36-3.03 (m, 3H), 2.94-2.69 (m, 4H), 2.65-2.54 (m, 1H), 2.50-2.34 (m, 2H), 2.25 (d, J=11.1 Hz, 1H), 2.18-2.05 (m, 2H), 1.98 (d, J=13.8 Hz, 1H), 1.91-1.80 (m, 2H), 1.78-1.61 (m, 6H), 1.51-1.31 (m, 10H), 1.08 (d, J=7.5 Hz, 3H), 0.90 (d, J=6.8 Hz, 3H).
In a manner similar to Step 1 of Example 51, 58, the titled compound (1.2 g, 2.40 mmol, 66.22% yield) was obtained as a yellow oil.
MS (M+H)+=401.2
In a manner similar to Step 2 of Example 51, 58, the titled compound (600 mg, 1.48 mmol, 61.87% yield, 99% purity) was obtained as a yellow oil.
MS (M+H)+=401.2
In a manner similar to Step 3 of Example 51, 58, the titled compound (600 mg, 668.88 μmol, 44.64% yield, 96% purity) was obtained as a yellow solid.
MS (M+H)+=861.5
1H NMR (400 MHz, CDCl3) δ=8.06 (brs, 1H), 7.54-7.49 (m, 1H), 7.11 (d, J=7.1 Hz, 1H), 6.90 (d, J=8.7 Hz, 1H), 6.25 (brs, 1H), 6.00 (d, J=9.7 Hz, 1H), 5.80 (dd, J=6.4, 9.4 Hz, 1H), 5.54 (brs, 1H), 5.20 (brs, 1H), 4.94 (dd, J=5.1, 12.2 Hz, 1H), 4.81 (brs, 1H), 4.66 (brs, 1H), 4.30 (brs, 1H), 3.34-3.20 (m, 3H), 3.14-3.04 (m, 1H), 2.94-2.72 (m, 3H), 2.66-2.54 (m, 2H), 2.49-2.35 (m, 2H), 2.27 (d, J=14.2 Hz, 1H), 2.20-2.09 (m, 2H), 1.95-1.75 (m, 4H), 1.73-1.64 (m, 4H), 1.53-1.23 (m, 12H), 1.10 (d, J=7.3 Hz, 3H), 0.93-0.90 (m, 12H), 0.10 (s, 6H).
In a manner similar to Step 4 of Example 51, 58, the titled compound (125 mg, 164.01 μmol, 47.08% yield, 98% purity) was obtained as a yellow solid.
MS (M+H)+=747.7
1H NMR (400 MHz, CDCl3) δ=8.37 (br d, J=15.2 Hz, 1H), 7.47-7.37 (m, 1H), 7.02 (d, J=7.0 Hz, 1H), 6.81 (d, J=8.6 Hz, 1H), 6.16 (br s, 1H), 5.90 (d, J=9.7 Hz, 1H), 5.76-5.64 (m, 1H), 5.45 (br s, 1H), 5.15 (br s, 1H), 4.92-4.78 (m, 1H), 4.70 (br s, 1H), 4.56 (br s, 1H), 4.25 (br s, 1H), 3.25-2.96 (m, 4H), 2.84-2.60 (m, 4H), 2.57-2.47 (m, 1H), 2.41-2.25 (m, 2H), 2.18 (br d, J=12.0 Hz, 1H), 2.11-1.87 (m, 4H), 1.79 (br dd, J=8.4, 13.4 Hz, 3H), 1.70-1.58 (m, 4H), 1.44-1.21 (m, 12H), 1.00 (d, J=7.3 Hz, 3H), 0.82 (dd, J=1.3, 7.0 Hz, 3H).
In a manner similar to Step 1 of Example 53, 60, the titled compound (1.6 g, 6.19 mmol, 19.60% yield) was obtained as a yellow oil.
In a manner similar to Step 1 of Example 51, 58, the titled compound (0.93 g, 1.61 mmol, 44.43% yield, 89% purity) was obtained as a yellow oil.
MS (M+H)+=515.3
In a manner similar to Step 2 of Example 51, 58, the titled compound (814 mg, 1.81 mmol, 99.88% yield, HCl salt) was obtained as a yellow oil.
In a manner similar to Step 3 of Example 51, 58, the titled compound (599 mg, 677.59 μmol, 37.54% yield, 99% purity) was obtained as a yellow solid.
MS (M+H)+=875.6
1H NMR (400 MHz, CDCl3) δ=8.05 (s, 1H), 7.50 (dd, J=7.2, 8.5 Hz, 1H), 7.09 (d, J=7.0 Hz, 1H), 6.89 (d, J=8.6 Hz, 1H), 6.23 (brs, 1H), 5.98 (d, J=9.7 Hz, 1H), 5.79 (dd, J=6.1, 9.4 Hz, 1H), 5.53 (brs, 1H), 5.19 (brs, 1H), 4.97-4.87 (m, 1H), 4.79 (brs, 1H), 4.65-4.55 (m, 1H), 4.29 (t, J=3.5 Hz, 1H), 3.31-3.17 (m, 2H), 3.15-3.08 (m, 1H), 2.94-2.68 (m, 3H), 2.66-2.51 (m, 2H), 2.48-2.33 (m, 2H), 2.25 (d, J=12.1 Hz, 1H), 2.20-2.07 (m, 2H), 1.94-1.72 (m, 4H), 1.71-1.62 (m, 4H), 1.50-1.23 (m, 14H), 1.08 (d, J=7.3 Hz, 3H), 0.93-0.87 (m, 12H), 0.09 (s, 6H)
In a manner similar to Step 4 of Example 51, 58, the titled compound (200.5 mg, 258.23 μmol, 56.50% yield, 98% purity) was obtained as a yellow solid.
MS (M+H)+=761.5
1H NMR (400 MHz, CDCl3) δ=8.38-7.94 (m, 1H), 7.48-7.37 (m, 1H), 7.02 (d, J=7.1 Hz, 1H), 6.81 (d, J=8.6 Hz, 1H), 6.16 (br s, 1H), 5.91 (d, J=9.5 Hz, 1H), 5.76-5.67 (m, 1H), 5.45 (br s, 1H), 5.15 (br s, 1H), 4.92-4.80 (m, 1H), 4.68 (br d, J=5.8 Hz, 1H), 4.56 (br s, 1H), 4.25 (br s, 1H), 3.28-3.00 (m, 4H), 2.87-2.59 (m, 4H), 2.57-2.46 (m, 1H), 2.40-2.26 (m, 2H), 2.22-1.87 (m, 5H), 1.81 (br d, J=8.1 Hz, 2H), 1.70-1.54 (m, 5H), 1.43-1.12 (m, 14H), 1.01 (d, J=7.4 Hz, 3H), 0.85-0.79 (m, 3H)
In a manner similar to Step 1 of Example 51, 58, the titled compound (600 mg, 601.54 μmol, 20.77% yield, 53% purity) was obtained as a yellow oil.
MS (M−100+H)+=429.3
In a manner similar to Step 2 of Example 51, 58, the titled compound (360 mg, 394.85 μmol, 65.64% yield, 51% purity, HCl salt) was obtained as a yellow oil.
MS (M+H)+=429.1
In a manner similar to Step 3 of Example 51, 58, the titled compound (298.9 mg, 332.78 μmol, 39.61% yield, 99% purity) was obtained as a yellow oil.
MS (M+H)+=889.6
1H NMR (400 MHz, CDCl3) δ=7.93 (brs, 1H), 7.41 (dd, J=7.2, 8.2 Hz, 1H), 7.01 (d, J=7.0 Hz, 1H), 6.80 (d, J=8.6 Hz, 1H), 6.15 (t, J=5.4 Hz, 1H), 5.90 (d, J=9.6 Hz, 1H), 5.70 (dd, J=6.2, 9.6 Hz, 1H), 5.44 (brs, 1H), 5.11 (brs, 1H), 4.84 (dd, J=5.4, 12.0 Hz, 1H), 4.69 (brs, 1H), 4.56 (dd, J=3.0, 8.0 Hz, 1H), 4.20 (t, J=3.6 Hz, 1H), 3.23-3.08 (m, 3H), 3.00 (dd, J=5.8, 12.8 Hz, 1H), 2.85-2.61 (m, 3H), 2.56-2.42 (m, 2H), 2.40-2.22 (m, 2H), 2.20-2.11 (m, 1H), 2.09-1.98 (m, 2H), 1.84-1.64 (m, 4H), 1.62-1.52 (m, 4H), 1.40-1.29 (m, 5H), 1.19 (brs, 11H), 1.00 (d, J=7.4 Hz, 3H), 0.83-0.80 (m, 12H), 0.07 (s, 6H).
In a manner similar to Step 4 of Example 51, 58, the titled compound (37.8 mg, 47.31 μmol, 21.04% yield, 97% purity) was obtained as a yellow solid.
MS (M+H)+=775.6
1H NMR (400 MHz, CDCl3) δ=8.39-8.14 (m, 1H), 7.56-7.45 (m, 1H), 7.10 (d, J=7.2 Hz, 1H), 6.89 (d, J=8.4 Hz, 1H), 6.23 (br s, 1H), 5.99 (d, J=9.6 Hz, 1H), 5.84-5.73 (m, 1H), 5.53 (br s, 1H), 5.23 (br s, 1H), 4.99-4.87 (m, 1H), 4.75 (br s, 1H), 4.64 (br s, 1H), 4.34 (br s, 1H), 3.32-3.24 (m, 3H), 3.12 (br s, 1H), 2.95-2.67 (m, 4H), 2.66-2.52 (m, 1H), 2.49-2.32 (m, 2H), 2.29-1.95 (m, 5H), 1.87 (br d, J=7.6 Hz, 2H), 1.77-1.63 (m, 4H), 1.50-1.18 (m, 16H), 1.09 (d, J=7.6 Hz, 3H), 0.90 (d, J=7.2 Hz, 3H).
In a manner similar to Step 1 of Example 53, 60, the titled compound (2.3 g, 8.03 mmol, 22.00% yield) was obtained as a white solid.
1H NMR (400 MHz, CDCl3) δ=4.52 (br s, 1H), 3.15-3.09 (m, 2H), 2.70 (t, J=7.0 Hz, 2H), 1.46 (s, 9H), 1.35-1.22 (m, 20H) Step 2: Synthesis of tert-butyl N-[11-[[2-(2,6-dioxo-3-piperidyl)-1,3-dioxo-isoindolin-4-yl]amino]undecyl]carbamate (45g)
In a manner similar to Step 1 of Example 51, 58, the titled compound (0.6 g, 961.92 μmol, 26.57% yield, 87% purity) was obtained as a yellow oil.
MS (M+H)+=443.2
In a manner similar to Step 2 of Example 51, 58, the titled compound (529 mg, 1.10 mmol, 99.88% yield, HCl salt) was obtained as a yellow oil.
MS (M+H)+=443.2
In a manner similar to Step 3 of Example 51, 58, the titled compound (592.5 mg, 616.62 μmol, 55.84% yield, 94% purity) was obtained as a yellow solid.
MS (M+H)+=903.6
1H NMR (400 MHz, CDCl3) δ=8.06 (brs, 1H), 7.50 (dd, J=7.2, 8.2 Hz, 1H), 7.09 (d, J=7.0 Hz, 1H), 6.89 (d, J=8.6 Hz, 1H), 6.24-6.23 (m, 1H), 5.98 (d, J=9.6 Hz, 1H), 5.79 (dd, J=6.0, 9.2 Hz, 1H), 5.53 (brs, 1H), 5.19 (brs, 1H), 4.96-4.88 (m, 1H), 4.78 (brs, 1H), 4.70-4.60 (m, 1H), 4.33-4.25 (m, 1H), 3.32-3.15 (m, 3H), 3.13-3.03 (m, 1H), 2.96-2.68 (m, 3H), 2.65-2.51 (m, 2H), 2.47-2.31 (m, 2H), 2.25 (d, J=12.2 Hz, 1H), 2.19-2.04 (m, 2H), 1.93-1.72 (m, 4H), 1.69-1.59 (m, 4H), 1.50-1.37 (m, 5H), 1.35-1.25 (m, 13H), 1.08 (d, J=7.4 Hz, 3H), 0.92-0.88 (m, 12H), 0.09 (s, 6H).
In a manner similar to Step 4 of Example 51, 58, the titled compound (89 mg, 110.55 μmol, 33.28% yield, 98% purity) was obtained as a yellow solid
MS (M+H)+=789.6
1H NMR (400 MHz, CDCl3) δ=8.20 (br s, 1H), 7.55-7.45 (m, 1H), 7.10 (d, J=7.2 Hz, 1H), 6.89 (d, J=8.6 Hz, 1H), 6.23 (s, 1H), 5.99 (d, J=9.8 Hz, 1H), 5.85-5.72 (m, 1H), 5.53 (br s, 1H), 5.24 (br s, 1H), 4.93 (br d, J=8.8 Hz, 1H), 4.74 (br s, 1H), 4.64 (br s, 1H), 4.35 (br s, 1H), 3.32-3.23 (m, 3H), 3.22-3.00 (m, 2H), 2.93-2.85 (m, 1H), 2.84-2.69 (m, 3H), 2.63 (s, 1H), 2.50-2.33 (m, 2H), 2.26 (br d, J=12.2 Hz, 1H), 2.19-1.95 (m, 4H), 1.92-1.81 (m, 2H), 1.78-1.60 (m, 4H), 1.48-1.20 (m, 18H), 1.09 (d, J=7.5 Hz, 3H), 0.91 (d, J=7.0 Hz, 3H).
To a mixture of 3-(4-amino-1-oxoisoindolin-2-yl)piperidine-2,6-dione (3 g, 11.57 mmol) and 2-[2-[2-(tert-butoxycarbonylamino)ethoxy]ethoxy]ethyl 4-methylbenzenesulfonate (6.50 g, 12.73 mmol) in DMF (30 mL) was added DIPEA (4.49 g, 34.71 mmol, 6.05 mL) in one portion at 25° C. The mixture was stirred at 110° C. for 12 h. LCMS showed starting material was consumed completely and desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=10:1) indicated starting material was consumed completely and one major new spot was formed. The reaction mixture was diluted with H2O (90 mL) and extracted with EtOAc (90 mL×3). The organic layer was washed with brine (90 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=2/1 to 0/1) to afford tert-butyl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1-oxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (2.1 g, 4.28 mmol, 37.00% yield) as a reddish brown solid.
MS (M+H)+=491.3
To a mixture of tert-butyl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1-oxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (2.1 g, 4.28 mmol) in dioxane (10 mL) was added HCl/dioxane (4 M, 20 mL) in one portion at 25° C. and the mixture was stirred at 25° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was concentrated in vacuum to afford 3-(4-((2-(2-(2-aminoethoxy)ethoxy)ethyl)amino)-1-oxoisoindolin-2-yl)piperidine-2,6-dione (1.7 g, crude, HCl salt) as a reddish brown solid.
MS (M+H)+=391.2
To a mixture of 3-(4-((2-(2-(2-aminoethoxy)ethoxy)ethyl)amino)-1-oxoisoindolin-2-yl)piperidine-2,6-dione (1.7 g, 3.98 mmol, HCl salt) and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (3.73 g, 3.98 mmol) in DMAC (15 mL) was added TEA (1.21 g, 11.95 mmol, 1.66 mL) in one portion at 15° C. The mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was diluted with H2O (45 mL) and extracted with EtOAc (45 mL×3). The organic layer was washed with brine (45 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by prep-HPLC (column: Waters Xbridge C18 150*50 mm*10 μm; mobile phase: [water (10 mM NH4HCO3)-ACN]; B %: 60%-90%, 11.5 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1-oxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (886 mg, 957.71 μmol, 24.05% yield, 92% purity) as a white solid.
MS (M+H)+=851.8
1H NMR (400 MHz, Chloroform-d) δ 8.23 (d, J=18.0 Hz, 1H), 7.35 (t, J=7.7 Hz, 1H), 7.33-7.28 (m, 1H), 6.79 (d, J=7.9 Hz, 1H), 5.97 (d, J=9.6 Hz, 1H), 5.83-5.74 (m, 1H), 5.51 (s, 1H), 5.40-5.08 (m, 3H), 4.74-4.59 (m, 1H), 4.41-4.24 (m, 2H), 4.22-4.13 (m, 1H), 4.08-3.95 (m, 1H), 3.71 (t, J=5.0 Hz, 2H), 3.67-3.57 (m, 4H), 3.57-3.49 (m, 2H), 3.47-3.24 (m, 4H), 2.96-2.74 (m, 2H), 2.64-2.47 (m, 2H), 2.47-2.28 (m, 3H), 2.28-2.16 (m, 2H), 2.09 (d, J=14.4 Hz, 1H), 1.91-1.71 (m, 4H), 1.70-1.60 (m, 3H), 1.50-1.37 (m, 1H), 1.35-1.22 (m, 1H), 1.06 (dd, J=7.4, 2.0 Hz, 3H), 0.93-0.79 (m, 12H), 0.12-0.04 (m, 6H).
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1-oxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (670 mg, 787.21 μmol) in THF (6 mL) was added TBAF (1 M, 3.15 mL) and AcOH (236.36 mg, 3.94 mmol, 225.10 μL) in one portion at 15° C. The mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. TLC (SiO2, Dichloromethane:Methanol=10:1) indicated starting material was consumed completely and one major new spot was detected. The reaction mixture was quenched with saturated NH4Cl (20 mL) and extracted with EtOAc (20 mL×3). The organic layer was dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Dichloromethane/Methanol=1/0 to 8/1) followed by prep--HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 35%-65%, 10 min) to afford 160 mg with 72% purity of product. The less pure product was re-purified by prep-HPLC (column: Unisil 3-100 C18 Ultra 150*50 mm*3 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 40%-60%, 10 min) followed by prep-TLC (SiO2, DCM:MeOH:THF=10:10:1) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1-oxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (94.1 mg, 123.87 μmol, 15.74% yield, 97% purity) as a white solid.
MS (M+H)+=737.5
1H NMR (400 MHz, Chloroform-d) δ 7.39-7.32 (m, 1H), 7.31-7.27 (m, 1H), 6.79 (d, J=7.9 Hz, 1H), 5.96 (dd, J=9.6, 5.1 Hz, 1H), 5.83-5.72 (m, 1H), 5.50 (s, 1H), 5.35-5.11 (m, 3H), 4.65-4.50 (m, 1H), 4.42-4.14 (m, 3H), 3.76-3.67 (m, 2H), 3.66-3.55 (m, 5H), 3.53-3.33 (m, 4H), 3.32-3.17 (m, 1H), 2.93-2.74 (m, 2H), 2.73-2.55 (m, 2H), 2.50-2.27 (m, 3H), 2.27-2.15 (m, 2H), 2.06 (d, J=14.6 Hz, 1H), 1.95-1.70 (m, 5H), 1.65-1.53 (m, 2H), 1.46-1.26 (m, 2H), 1.06 (dd, J=7.4, 3.7 Hz, 3H), 0.87 (dd, J=7.0, 4.6 Hz, 3H).
To a solution of 5-fluoroisobenzofuran-1,3-dione (4 g, 24.08 mmol) and 3-aminopiperidine-2,6-dione (3.96 g, 24.08 mmol, HCl salt) in HOAc (80 mL) was added sodium acetate (2.96 g, 36.12 mmol). The mixture was then stirred at 130° C. for 16 hr. LCMS showed 100% desired mass was detected. The reaction mixture was cooled to room temperature and concentrated under vacuum. The crude product was triturated with H2O (100 mL) at 25° C. for 10 min. Compound 2-(2,6-dioxo-3-piperidyl)-5-fluoro-isoindoline-1,3-dione (5.5 g, 19.91 mmol, 82.69% yield) was obtained as a white solid.
MS (M+H)+=277.1
To the solution of 2-(2,6-dioxo-3-piperidyl)-5-fluoro-isoindoline-1,3-dione (2 g, 7.24 mmol) and tert-butyl N-[2-[2-(2-aminoethoxy)ethoxy]ethyl]carbamate (1.80 g, 7.24 mmol) in NMP (20 mL) was added DIPEA (1.87 g, 14.48 mmol, 2.52 mL) and the resulting mixture was stirred at 90° C. for 16 hr. LCMS showed that desired mass was detected. The reaction mixture was cooled to room temperature. EtOAc (150 mL) and water (150 mL) were added and layers were separated. The aqueous phase was extracted with EtOAc (200 mL×2). Combined extracts were washed with brine (300 mL), dried over Na2SO4, filtered and concentrated under vacuum. The residue was purified by silica gel chromatography (Petroleum ether:Ethyl acetate 1:1 to 0:1). Compound tert-butyl N-[2-[2-[2-[[2-(2,6-dioxo-3-piperidyl)-1,3-dioxo-isoindolin-5-yl]amino]ethoxy]ethoxy]ethyl]carbamate (1.1 g, 1.77 mmol, 24.39% yield, 81% purity) was obtained as a black brown oil.
MS (M+H)+=505.1
To a solution of tert-butyl N-[2-[2-[2-[[2-(2,6-dioxo-3-piperidyl)-1,3-dioxo-isoindolin-5-yl]amino]ethoxy]ethoxy]ethyl]carbamate (1 g, 1.61 mmol) in dioxane (20 mL) was added HCl/dioxane (4 M, 20 mL). The mixture was then stirred at 25° C. for 6 hr. LCMS showed that starting material was consumed and 77% desired mass was detected. The residue was combined with another batch (100 mg scale) and concentrated under vacuum. Compound 5-[2-[2-(2-aminoethoxy)ethoxy]ethylamino]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (1.3 g, crude, HCl salt) was obtained as a yellow oil
MS (M+H)+=405.1
To the solution of 5-[2-[2-(2-aminoethoxy)ethoxy]ethylamino]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (600 mg, 1.48 mmol, HCl salt) and [(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-[tert-butyl(dimethyl)silyl]oxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl] (4-nitrophenyl) carbonate (1.01 mg, 1.68 μmol) in DMF (10 mL) was added TEA (450.38 mg, 4.45 mmol, 619.51 μL) and the resulting mixture was stirred at 25° C. for 12 hr. LCMS showed that the starting material was consumed and 35% desired mass was detected. The mixture was poured into water (50 mL) and extracted with EtOAc (50 mL×3). The combined organic layer was washed with brine (50 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 68%-98%, 11 min). Compound (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-5-yl)amino)ethoxy)ethoxy)ethyl)carbamate (105 mg, 120.16 μmol, 8.10% yield, 99% purity) was obtained as yellow solid.
MS (M+H)+=865.8
1H NMR (400 MHz, CDCl3) δ=8.07 (s, 1H), 7.61 (d, J=8.3 Hz, 1H), 6.99 (d, J=1.7 Hz, 1H), 6.79 (br d, J=8.4 Hz, 1H), 5.98 (d, J=9.7 Hz, 1H), 5.79 (dd, J=6.1, 9.5 Hz, 1H), 5.52 (br s, 1H), 5.21 (br s, 2H), 4.93 (dd, J=5.3, 12.3 Hz, 1H), 4.66 (br s, 1H), 4.34-4.25 (m, 1H), 3.72 (t, J=5.0 Hz, 2H), 3.63 (s, 4H), 3.58-3.51 (m, 2H), 3.50-3.36 (m, 3H), 3.36-3.26 (m, 1H), 2.94-2.69 (m, 3H), 2.65-2.51 (m, 2H), 2.44 (br s, 1H), 2.35 (br s, 1H), 2.26 (br d, J=12.5 Hz, 1H), 2.17-2.07 (m, 2H), 1.92-1.81 (m, 2H), 1.78-1.65 (m, 4H), 1.45 (br s, 1H), 1.36-1.25 (m, 1H), 1.08-1.07 (m, 3H), 0.92-0.86 (m, 12H), 0.08 (s, 6H).
To a stirred solution of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-5-yl)amino)ethoxy)ethoxy)ethyl)carbamate (250 mg, 288.99 μmol) in THF (5 mL) was added a premixed solution of TBAF (1 M, 1.16 mL) and AcOH (83.30 mg, 1.39 mmol, 79.33 μL) and the resulting solution was heated at 25° C. for 12 h. LCMS showed that starting material was consumed and 85% desired mass was detected. The mixture was poured into water (50 mL) and extracted with EtOAc (50 mL×3). The combined organic layer was washed with brine (100 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by silica gel column (Petroleum ether:Ethyl acetate=1:1-0:1). Compound (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-5-yl)amino)ethoxy)ethoxy)ethyl)carbamate (70.2 mg, 89.76 μmol, 31.06% yield, 96% purity) was obtained as yellow solid.
MS (M+H)+=751.6
1H NMR (400 MHz, CDCl3) δ=8.17 (br s, 1H), 7.61 (d, J=8.3 Hz, 1H), 7.01 (d, J=1.7 Hz, 1H), 6.79 (br d, J=7.8 Hz, 1H), 5.98 (d, J=9.8 Hz, 1H), 5.79 (dd, J=6.4, 9.5 Hz, 1H), 5.53 (br s, 1H), 5.31 (br s, 1H), 5.22 (br s, 1H), 4.93 (dd, J=5.3, 12.0 Hz, 1H), 4.64 (br s, 1H), 4.32 (br s, 1H), 3.72 (t, J=5.0 Hz, 2H), 3.67-3.51 (m, 6H), 3.40 (br s, 4H), 2.94-2.66 (m, 5H), 2.63-2.54 (m, 1H), 2.48-2.32 (m, 2H), 2.26 (br d, J=10.6 Hz, 1H), 2.17-2.04 (m, 2H), 2.00-1.80 (m, 3H), 1.77-1.69 (m, 2H), 1.46-1.35 (m, 2H), 1.08 (d, J=7.3 Hz, 3H), 0.90 (br d, J=6.8 Hz, 3H).
To the mixture of [(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-hydroxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl] (4-nitrophenyl) carbonate (1 g, 2.06 mmol), MgSO4 (495.83 mg, 4.12 mmol) and Ag2O (954.60 mg, 4.12 mmol) in DCM (20 mL) was added Mel (584.68 mg, 4.12 mmol, 256.44 μL) and the resulting mixture was stirred at 25° C. for 12 hr. LCMS showed that 47% starting material remained and 45% desired mass was detected. The mixture was filtered and the filtrate was concentrated. The residue was purified by silica gel column (Petroleum ether:Ethyl acetate=5:1-1:1). Compound [(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-methoxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl] (4-nitrophenyl) carbonate (0.24 g, 442.00 μmol, 21.46% yield, 92% purity) was obtained as white solid.
MS (M+H)+=500.3
To the solution of [(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-methoxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl] (4-nitrophenyl) carbonate (240 mg, 480.43 μmol) and 4-[2-[2-(2-aminoethoxy)ethoxy]ethylamino]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (254.17 mg, 576.52 μmol, HCl salt) in DMF (5 mL) was added TEA (145.84 mg, 1.44 mmol, 200.61 μL) and the resulting mixture was stirred at 20° C. for 12 hr. LCMS showed the starting material was consumed and 79% desired mass was detected. The mixture was poured into water (50 mL) and extracted with EtOAc (50 mL×3), the combined organic layer was washed with brine (100 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex Luna C18 150*25 mm*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 47%-77%, 11 min). Compound (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-methoxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (125.7 mg, 159.41 μmol, 33.18% yield, 97% purity) was obtained as yellow solid.
MS (M+H)+=765.4
1H NMR (400 MHz, CDCl3) δ=8.64-8.26 (m, 1H), 7.50 (t, J=7.8 Hz, 1H), 7.12 (d, J=7.1 Hz, 1H), 6.91 (d, J=8.6 Hz, 1H), 6.51 (br s, 1H), 5.96 (d, J=9.8 Hz, 1H), 5.81-5.71 (m, 1H), 5.50 (br s, 1H), 5.22 (br d, J=13.3 Hz, 2H), 4.93 (br s, 1H), 4.51 (br d, J=7.3 Hz, 1H), 3.81-3.69 (m, 3H), 3.64 (s, 4H), 3.61-3.50 (m, 2H), 3.49-3.39 (m, 3H), 3.33 (d, J=5.4 Hz, 4H), 2.92-2.64 (m, 5H), 2.49-2.31 (m, 2H), 2.24 (br d, J=11.5 Hz, 1H), 2.18-2.03 (m, 3H), 1.93-1.69 (m, 3H), 1.68-1.61 (m, 2H), 1.42-1.31 (m, 2H), 1.07 (d, J=7.3 Hz, 3H), 0.89 (br d, J=5.6 Hz, 3H).
To a solution (4R,6R)-4-hydroxy-6-(2-((1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)ethyl)tetrahydro-2H-pyran-2-one (1 g, 2.90 mmol), DMAP (17.73 mg, 145.00 μmol) in DCM (15 mL) was added imidazole (592.77 mg, 8.70 mmol) followed by triisopropylsilyl chloride (531.61 mg, 2.75 mmol, 590.02 μL), the mixture was stirred at 40° C. for 16 hours. Additional triisopropylsilyl chloride (167.74 mg, 870.00 μmol, 186.17 μL) was added and the resulting mixture was stirred at 40° C. for 16 hours. LCMS showed 25% of starting material remained and 35% of desired mass was detected. The mixture was concentrated under reduced pressure. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=15/1 to 4/1). Compound (4R,6R)-6-(2-((1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)ethyl)-4-((triisopropylsilyl)oxy)tetrahydro-2H-pyran-2-one (690 mg, 1.42 mmol, 48.91% yield, 98% purity)) was obtained a yellowish oil. MS (M+H)+=477.3.
To a solution of (4R,6R)-6-(2-((1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)ethyl)-4-((triisopropylsilyl)oxy)tetrahydro-2H-pyran-2-one (690 mg, 1.42 mmol) in Py (15 mL) was added DMAP (1.23 g, 10.10 mmol) followed by (4-nitrophenyl) carbonochloridate (2.00 g, 9.93 mmol). The mixture was stirred at 25° C. for 16 hours. LCMS showed 15% of desired mass was detected. The mixture was added HCl (5 M) to adjust pH=5-6 and extracted with EtOAc (40 mL×2). The combined organic layers were washed with NaHCO3 solution (40 mL) and brine (40 mL), dried over Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=20/1). Compound (1S,3R,7S,8S,8aR)-3,7-dimethyl-8-(2-((2R,4R)-6-oxo-4-((triisopropylsilyl)oxy)tetrahydro-2H-pyran-2-yl)ethyl)-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (1.7 g, 794.56 μmol, 56.02% yield, 30% purity)) was obtained as a yellow solid. MS (M+H)+=642.4.
To a solution of (1S,3R,7S,8S,8aR)-3,7-dimethyl-8-(2-((2R,4R)-6-oxo-4-((triisopropylsilyl)oxy)tetrahydro-2H-pyran-2-yl)ethyl)-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (460 mg, 630.66 μmol), 4-((2-(2-(2-aminoethoxy)ethoxy)ethyl)amino)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (278.04 mg, 630.66 μmol, HCl salt) in DMAC (3 mL) was added TEA (255.26 mg, 2.52 mmol, 351.12 μL). The mixture was stirred at 25° C. for 16 hours. LCMS showed 55% of desired mass was detected. The reaction mixture was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 80%-100%, 10 min). Compound (1S,3R,7S,8S,8aR)-3,7-dimethyl-8-(2-((2R,4R)-6-oxo-4-((triisopropylsilyl)oxy)tetrahydro-2H-pyran-2-yl)ethyl)-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (182.6 mg, 195.25 μmol, 30.96% yield, 97% purity)) was obtained as a yellow solid. MS (M+H)+=907.6.
1H NMR (400 MHz, CDCl3) δ=8.56-8.22 (m, 1H), 7.57-7.41 (m, 1H), 7.11 (d, J=7.1 Hz, 1H), 6.91 (d, J=8.5 Hz, 1H), 6.49 (s, 1H), 5.96 (d, J=9.8 Hz, 1H), 5.77 (dd, J1=9.5 Hz, J2=6.0 Hz, 1H), 5.50 (s, 1H), 5.21 (s, 2H), 4.91 (m, 1H), 4.74-4.63 (m, 1H), 4.45-4.34 (m, 1H), 3.71 (t, J=5.3 Hz, 2H), 3.63 (s, 4H), 3.56 (m, 2H), 3.46 (q, J=5.4 Hz, 3H), 3.31 (m, 1H), 2.95-2.69 (m, 3H), 2.63 (dd, J1=5.9 Hz, J2=4.2 Hz, 2H), 2.48-2.30 (m, 2H), 2.24 (d, J=11.5 Hz, 1H), 2.17-2.04 (m, 2H), 1.98-1.91 (m, 1H), 1.89-1.63 (m, 6H), 1.49-1.39 (m, 1H), 1.37-1.28 (m, 1H), 1.10-1.01 (m, 23H), 0.89 (d, J=6.9 Hz, 3H).
To a solution (4R,6R)-4-hydroxy-6-(2-((1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)ethyl)tetrahydro-2H-pyran-2-one (1 g, 2.90 mmol) in DCM (15 mL) was added imidazole (592.77 mg, 8.71 mmol) followed by tert-butyl-chloro-diphenyl-silane (757.87 mg, 2.76 mmol, 708.29 μL). The mixture was stirred at 25° C. for 16 hours. LCMS showed 39% of desired mass was detected. The mixture was concentrated under reduced pressure. The residue was purified by (SiO2, Petroleum ether/Ethyl acetate=10/1 to 4/1). Compound (4R,6R)-4-((tert-butyldiphenylsilyl)oxy)-6-(2-((1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)ethyl)tetrahydro-2H-pyran-2-one (1.1 g, 1.04 mmol, 35.94% yield, 53% purity)) was obtained as a brown oil.
MS (M+H)+=559.3
To a solution of (4R,6R)-4-((tert-butyldiphenylsilyl)oxy)-6-(2-((1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)ethyl)tetrahydro-2H-pyran-2-one (1.1 g, 1.04 mmol) in Py (15 mL) was added DMAP (907.47 mg, 7.43 mmol) followed by (4-nitrophenyl) carbonochloridate (1.47 g, 7.30 mmol). The mixture was stirred at 25° C. for 16 hours. LCMS showed 30% of desired mass was detected. To this mixture was added HCl solution (5 M) to adjust pH=5-6, and then the resulting mixture was extracted with EtOAc (40 mL×2). The combined organic layers were washed with NaHCO3 solution (40 mL) and brine (40 mL), dried over Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=15/1 to 4/1). Compound (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldiphenylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (1.7 g, 798.43 μmol, 76.53% yield, 34% purity)) was obtained as a yellow solid. MS (M+H)+=724.4.
A mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldiphenylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (700 mg, 328.76 μmol), 4-[2-[2-(2-aminoethoxy) ethoxy] ethylamino]-2-(2, 6-dioxo-3-piperidyl) isoindoline-1, 3-dione (132.96 mg, 328.76 μmol), TEA (133.07 mg, 1.32 mmol, 183.04 μL) in DMAC (3 mL) was stirred at 25° C. for 16 hours. Then to this mixture was added 4-[2-[2-(2-aminoethoxy) ethoxy] ethylamino]-2-(2, 6-dioxo-3-piperidyl) isoindoline-1, 3-dione (132.96 mg, 328.76 μmol) and the resulting mixture was stirred at 25° C. for 32 hours. LCMS showed 31% of desired mass was detected. The mixture was purified by (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 80%-100%, 11 min). Compound ((1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldiphenylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)carbamate (85.8 mg, 85.87 μmol, 26.12% yield, 99% purity)) was obtained as a yellow solid.
MS [M+H]+=989.2.
1H NMR (400 MHz, CDCl3) δ=8.44-8.15 (m, 1H), 7.67-7.59 (m, 4H), 7.52-7.38 (m, 7H), 7.11 (d, J=7.1 Hz, 1H), 6.90 (d, J=8.6 Hz, 1H), 6.49 (s, 1H), 5.97 (d, J=9.7 Hz, 1H), 5.78 (dd, J1=9.4 Hz, J2=6.1 Hz, 1H), 5.51 (s, 1H), 5.20 (s, 2H), 4.97-4.84 (m, 1H), 4.82-4.70 (m, 1H), 4.28 (s, 1H), 3.70 (t, J=5.4 Hz, 2H), 3.61 (d, J=3.9 Hz, 4H), 3.53 (d, J=4.8 Hz, 2H), 3.45-3.53 (m, 3H), 3.32-3.26 (m, 1H), 2.90-2.67 (m, 3H), 2.61-2.52 (m, 1H), 2.49-2.39 (m, 2H), 2.38-2.30 (m, 1H), 2.24 (d, J=11.7 Hz, 1H), 2.16-2.07 (m, 2H), 1.92-1.81 (m, 2H), 1.78-1.69 (m, 2H), 1.53-1.46 (m, 1H), 1.46-1.17 (m, 3H), 1.11-1.03 (m, 12H), 0.89 (d, J=6.8 Hz, 3H).
To a mixture of tert-butyl N-(4-hydroxybutyl)carbamate (1 g, 5.28 mmol) in THF (10 mL) was added PPh3 (2.63 g, 10.04 mmol), then a solution of CBr4 (3.33 g, 10.04 mmol) in THF (10 mL) was added drop-wise at 0° C. and the resulting mixture was stirred at 15° C. for 4 h. TLC indicated starting material was consumed completely and three new spots were detected. The reaction mixture was diluted with H2O (40 mL) and extracted with EtOAc (40 mL×3). The combined organic layer was dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/0 to 5/1) to afford tert-butyl (4-bromobutyl)carbamate (1.3 g, 5.16 mmol, 97.57% yield) as a white oil.
1H NMR (400 MHz, CDCl3) δ=4.60 (br s, 1H), 3.41 (t, J=6.7 Hz, 2H), 3.14 (q, J=6.2 Hz, 2H), 1.92-1.83 (m, 2H), 1.66-1.60 (m, 2H), 1.43 (s, 9H).
To a mixture of 2-(2,6-dioxopiperidin-3-yl)-4-fluoroisoindoline-1,3-dione (2 g, 7.24 mmol) and tert-butyl 4-aminopiperidine-1-carboxylate (1.60 g, 7.96 mmol) in DMF (10 mL) was added DIPEA (2.81 g, 21.72 mmol, 3.78 mL) in one portion at 25° C. and the resulting mixture was stirred at 90° C. for 16 h. LCMS showed starting material remained and desired mass was detected. The reaction mixture was diluted with H2O (30 mL) and extracted with EtOAc (30 mL×3). The combined organic layer was washed with brine (30 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/0 to 1/1) to afford tert-butyl 4-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)piperidine-1-carboxylate (2.1 g, 4.60 mmol, 63.53% yield) as a yellow solid.
MS (M+H)+=457.2
To a mixture of tert-butyl 4-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)piperidine-1-carboxylate (2.1 g, 4.60 mmol) in dioxane (20 mL) was added HCl/dioxane (4 M, 40 mL) at 25° C. and the resulting mixture was stirred at 25° C. for 1 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was concentrated in vacuum to afford 2-(2,6-dioxopiperidin-3-yl)-4-(piperidin-4-ylamino)isoindoline-1,3-dione (1.81 g, crude, HCl salt) as a yellow solid.
MS (M+H)+=357.2
To a mixture of 2-(2,6-dioxopiperidin-3-yl)-4-(piperidin-4-ylamino)isoindoline-1,3-dione (1 g, 2.55 mmol, HCl salt) in DMF (10 mL) was added DIPEA (1.97 g, 15.27 mmol, 2.66 mL) and tert-butyl (4-bromobutyl)carbamate (641.87 mg, 2.55 mmol, 521.84 μL) in one portion at 25° C. and the resulting mixture was stirred at 90° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. TLC indicated starting material was consumed completely and three new spots were detected. The reaction mixture was combined with another batch (0.5 g, scale) for work-up, the combined reaction mixture was diluted with H2O (30 mL) and extracted with EtOAc (30 mL×3). The combined organic layer was washed with brine (30 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=2/1 to 0/1) to afford tert-butyl (4-(4-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)piperidin-1-yl)butyl)carbamate (510 mg, 966.62 μmol, 36.02% yield, 98% purity) as a yellow solid.
MS (M+H)+=528.3
To a mixture of tert-butyl (4-(4-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)piperidin-1-yl)butyl)carbamate (510 mg, 966.62 μmol) in dioxane (2 mL) was added HCl/dioxane (4 M, 10 mL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 1 h. LCMS indicated starting material was consumed completely and desired mass was detected. The reaction mixture was concentrated in vacuum to afford 4-((1-(4-aminobutyl)piperidin-4-yl)amino)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (450 mg, crude, HCl salt) as a yellow solid.
MS (M+H)+=428.2
To a mixture of 4-((1-(4-aminobutyl)piperidin-4-yl)amino)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (450 mg, 969.92 μmol, HCl salt) in DMAC (4 mL) was added TEA (392.58 mg, 3.88 mmol, 540.01 μL) and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (465.39 mg, 775.93 μmol) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was diluted with H2O (12 mL) and extracted with EtOAc (12 mL×3). The combined organic layer was washed with brine (12 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by prep-HPLC (column: Waters Xbridge C18 150*50 mm*10 μm; mobile phase: [water (10 mM NH4HCO3)-ACN]; B %: 75%-100%, 11.5 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-(4-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)piperidin-1-yl)butyl)carbamate (611.3 mg, 660.74 μmol, 68.12% yield, 96% purity) as a yellow solid.
MS (M+H)+=888.6
1H NMR (400 MHz, CDCl3) δ=8.07 (br s, 1H), 7.53-7.46 (m, 1H), 7.10 (d, J=7.1 Hz, 1H), 6.88 (d, J=8.6 Hz, 1H), 6.24 (br d, J=7.7 Hz, 1H), 6.01-5.87 (m, 2H), 5.73 (m, 1H), 5.52 (br s, 1H), 5.18 (br s, 1H), 4.96-4.89 (m, 1H), 4.72-4.65 (m, 1H), 4.33-4.26 (m, 1H), 3.49 (br d, J=9.7 Hz, 1H), 3.26 (br s, 1H), 3.12 (br s, 1H), 2.94-2.70 (m, 4H), 2.66-2.56 (m, 2H), 2.48-2.33 (m, 4H), 2.28-2.09 (m, 5H), 2.03-1.98 (m, 2H), 1.93-1.81 (m, 3H), 1.80-1.58 (m, 8H), 1.51-1.25 (m, 3H), 1.10 (d, J=7.5 Hz, 3H), 0.92-0.89 (m, 12H), 0.09 (s, 6H).
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-(4-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)piperidin-1-yl)butyl)carbamate (510 mg, 574.21 μmol) in THE (6 mL) was added AcOH (172.41 mg, 2.87 mmol, 164.20 μL), TBAF (1 M, 2.30 mL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was quenched with NH4Cl (sat.aq, 12 mL) and extracted with EtOAc (12 mL×3). The organic layer was washed with NH4Cl (sat.aq, 12 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 22%-52%, 11 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-(4-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)piperidin-1-yl)butyl)carbamate (36.8 mg, 44.22 μmol, 7.70% yield, 93% purity, FA salt) as a yellow solid.
MS (M+H)+=774.5
1H NMR (400 MHz, Chloroform-d) δ 8.52-8.09 (m, 1H), 7.55-7.46 (m, 1H), 7.11 (d, J=7.1 Hz, 1H), 6.87 (d, J=8.6 Hz, 1H), 6.25 (d, J=7.6 Hz, 1H), 5.93 (d, J=9.5 Hz, 1H), 5.73 (t, J=8.0 Hz, 1H), 5.51 (s, 2H), 5.19 (s, 1H), 4.92 (dd, J=12.0, 5.4 Hz, 1H), 4.74-4.58 (m, 1H), 4.37-4.26 (m, 1H), 3.61-3.54 (m, 1H), 3.33-3.21 (m, 2H), 3.20-3.09 (m, 1H), 3.08-2.95 (m, 2H), 2.93-2.83 (m, 2H), 2.83-2.72 (m, 3H), 2.70-2.67 (m, 1H), 2.65-2.62 (m, 1H), 2.62-2.55 (m, 2H), 2.52-2.40 (m, 3H), 2.39-2.32 (m, 1H), 2.24 (d, J=11.8 Hz, 1H), 2.18-2.07 (m, 3H), 1.97 (d, J=14.3 Hz, 1H), 1.90-1.82 (m, 1H), 1.79-1.71 (m, 3H), 1.69-1.60 (m, 4H), 1.48-1.37 (m, 3H), 1.08 (d, J=7.4 Hz, 3H), 0.89 (d, J=6.9 Hz, 3H).
To a mixture of tert-butyl 2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetate (7 g, 18.02 mmol) in dioxane (10 mL) was added HCl/dioxane (4 M, 35.00 mL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 6 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was concentrated in vacuum to afford 2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetic acid (6.8 g, crude) as a white solid.
MS (M+H)+=333.3
To the solution of 2-[2-(2,6-dioxo-3-piperidyl)-1,3-dioxo-isoindolin-4-yl]oxyacetic acid (1 g, 3.01 mmol) and HATU (2.29 g, 6.02 mmol), DIPEA (1.17 g, 9.03 mmol, 1.57 mL) in DMF (10 mL) was added tert-butyl N-(5-aminopentyl)carbamate (669.72 mg, 3.31 mmol, 689.01 μL) and the resulting mixture was stirred at 25° C. for 2 h. LCMS showed 31% desired mass was detected. The mixture was poured into water (50 mL) and extracted with EtOAc (50 mL×2), Combined extracts were washed with brine (100 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by silica gel chromatography (Petroleum ether:Ethyl acetate 1:1 to 1:4) to afford tert-butyl N-[5-[[2-[2-(2,6-dioxo-3-piperidyl)-1,3-dioxo-isoindolin-4-yl]oxyacetyl]amino]pentyl]carbamate (0.7 g, 1.19 mmol, 39.62% yield, 88% purity) as white solid. MS (M+H)+=417.1
To a solution of tert-butyl N-[5-[[2-[2-(2,6-dioxo-3-piperidyl)-1,3-dioxo-isoindolin-4-yl]oxyacetyl]amino]pentyl]carbamate (0.7 g, 1.36 mmol) in dioxane (10 mL) was added HCl/dioxane (4 M, 10 mL) and the resulting mixture was stirred at 25° C. for 12 h. LCMS showed 97% desired mass was detected. The mixture was concentrated under vacuum to afford N-(5-aminopentyl)-2-[2-(2,6-dioxo-3-piperidyl)-1,3-dioxo-isoindolin-4-yl]oxy-acetamide (0.6 g, 1.32 mmol, 97.76% yield, HCl salt) as yellow solid. MS (M+H)+=417.1
To the solution of [(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-[tert-butyl(dimethyl)silyl]oxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl] (4-nitrophenyl) carbonate (794.61 mg, 1.32 mmol) and N-(5-aminopentyl)-2-[2-(2,6-dioxo-3-piperidyl)-1,3-dioxo-isoindolin-4-yl]oxy-acetamide (600 mg, 1.32 mmol, HCl salt) in DMF (10 mL) was added TEA (402.18 mg, 3.97 mmol, 553.20 μL) and the resulting mixture was stirred at 25° C. for 12 h. LCMS showed 57% desired mass was detected. The mixture was poured into water (50 mL) and extracted with EtOAc (50 mL×3). The combined organic layer was washed with brine (50 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 66%-96%, 10 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (5-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetamido)pentyl)carbamate (308.2 mg, 326.79 μmol, 24.67% yield, 93% purity) as white solid.
MS (M+H)+=877.2.
1H NMR (400 MHz, CDCl3) δ=8.85 (br s, 1H), 7.76 (t, J=7.8 Hz, 1H), 7.56 (br d, J=7.2 Hz, 2H), 7.20 (d, J=8.2 Hz, 1H), 5.97 (br d, J=9.8 Hz, 1H), 5.81-5.72 (m, 1H), 5.51 (br s, 1H), 5.16 (br s, 1H), 5.05 (br s, 1H), 4.91 (br s, 1H), 4.71-4.58 (m, 3H), 4.33-4.23 (m, 1H), 3.54-3.41 (m, 1H), 3.36-3.04 (m, 3H), 2.94-2.75 (m, 3H), 2.69-2.49 (m, 2H), 2.47-2.07 (m, 5H), 1.90-1.72 (m, 4H), 1.72-1.63 (m, 3H), 1.54-1.37 (m, 6H), 1.35-1.23 (m, 1H), 1.07 (br d, J=7.2 Hz, 3H), 0.92-0.85 (m, 12H), 0.07 (s, 6H).
To the solution of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (5-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetamido)pentyl)carbamate (0.2 g, 228.02 μmol) in THF (3 mL) was added AcOH (68.47 mg, 1.14 mmol, 65.21 μL), TBAF (1 M, 912.09 μL) and the resulting mixture was stirred at 25° C. for 12 h. LCMS showed 82% desired mass was detected. The mixture was poured into water (20 mL) and extracted with EtOAc (20 mL×3). The combined organic layer was washed by brine (50 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-TLC (Petroleum ether/Ethyl acetate=10/1) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (5-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetamido)pentyl)carbamate (105.5 mg, 132.77 μmol, 58.23% yield, 96% purity) as white solid.
MS (M+H)+=763.4
(m, 2H), 7.24-7.16 (m, 1H), 5.97 (d, J=9.6 Hz, 1H), 5.83-5.72 (m, 1H), 5.51 (br s, 1H), 5.30-5.17 (m, 1H), 5.15-4.96 (m, 1H), 4.75 (br s, 1H), 4.70-4.55 (m, 3H), 4.36-4.20 (m, 1H), 3.50-3.41 (m, 1H), 3.33-3.16 (m, 3H), 2.95-2.74 (m, 3H), 2.73-2.51 (m, 2H), 2.48-2.31 (m, 2H), 2.29-2.12 (m, 2H), 2.10-1.93 (m, 2H), 1.92-1.78 (m, 2H), 1.76-1.64 (m, 3H), 1.61-1.24 (m, 8H), 1.11-1.02 (m, 3H), 0.84-0.80 (m, 3H)
To a mixture of 4-amino-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (1 g, 3.66 mmol) in DMF (50 mL) was added 8-((tert-butoxycarbonyl)amino)octanoic acid (1.90 g, 7.32 mmol) at 15° C., then T3P (13.97 g, 21.96 mmol, 13.06 mL, 50% purity) and Py (2.89 g, 36.60 mmol, 2.95 mL) was added. The reaction mixture was stirred at 80° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=1:1) indicated starting material was consumed completely and two new spots were detected. The reaction mixture was diluted with H2O (150 mL) and extracted with EtOAc (150 mL×3). The organic layer was washed with brine (150 mL×3). The organic layer was dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=8/1 to 1/1) to afford tert-butyl (8-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-8-oxooctyl)carbamate (1.7 g, 3.30 mmol, 90.27% yield) as a yellow solid.
MS (M+H)+=515.2
To a mixture of tert-butyl (8-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-8-oxooctyl)carbamate (1.7 g, 3.30 mmol) in dioxane (10 mL) was added HCl/dioxane (4 M, 20 mL) in one portion at 25° C. and the resulting mixture was stirred at 25° C. for 1 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was concentrated in vacuum to afford 8-amino-N-(2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)octanamide (1.49 g, crude, HCl salt) as a yellow oil.
MS (M+H)+=415.2
To a mixture of 8-amino-N-(2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)octanamide (1.49 g, 3.30 mmol, HCl salt) and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (3.37 g, 3.60 mmol) in DMAC (15 mL) was added TEA (1.00 g, 9.91 mmol, 1.38 mL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was diluted with H2O (30 mL) and extracted with EtOAc (30 mL×3). The organic layer was dried over Na2SO4, filtrated and concentrated. The residue was purified by prep-HPLC (column: Waters Xbridge C18 150*50 mm*10 μm; mobile phase: [water (10 mM NH4HCO3)-ACN]; %: 70%-100%, 11.5 min) to afford (1S,3R,7S,8,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (8-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-8-oxooctyl)carbamate (560 mg, 620.71 μmol, 18.78% yield, 97% purity) as a white solid.
MS (M+H)+=875.8
1H NMR (400 MHz, Chloroform-d) δ 9.43 (s, 1H), 8.82 (d, J=8.4 Hz, 1H), 8.29-8.15 (m, 1H), 7.71 (dd, J=8.5, 7.3 Hz, 1H), 7.55 (d, J=7.3 Hz, 1H), 5.97 (d, J=9.6 Hz, 1H), 5.81-5.73 (m, 1H), 5.51 (s, 1H), 5.17 (s, 1H), 5.02-4.91 (m, 1H), 4.85-4.74 (m, 1H), 4.69-4.57 (m, 1H), 4.28 (s, 1H), 3.28-3.16 (m, 1H), 3.12-3.03 (m, 1H), 2.93-2.86 (m, 1H), 2.84-2.75 (m, 2H), 2.64-2.52 (m, 2H), 2.48-2.33 (m, 4H), 2.27-2.15 (m, 2H), 2.10 (d, J=14.9 Hz, 1H), 1.92-1.80 (m, 3H), 1.79-1.70 (m, 3H), 1.69-1.62 (m, 2H), 1.50-1.43 (m, 2H), 1.40-1.28 (m, 8H), 1.07 (dd, J=7.4, 2.2 Hz, 3H), 0.90-0.86 (m, 12H), 0.08 (s, 6H).
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (8-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-8-oxooctyl)carbamate (456 mg, 521.06 μmol) in THE (5 mL) was added TBAF (1 M, 2.08 mL), AcOH (156.45 mg, 2.61 mmol, 149.00 μL) drop-wise at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. TLC (SiO2, Dichloromethane:Methanol=10:1) indicated starting material was consumed completely and one major new spot was detected. The reaction mixture was quenched with saturated NH4Cl (15 mL) and extracted with EtOAc (15 mL×3). The organic layer was dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Dichloromethane/Methanol=1/0 to 8/1) followed by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 49%-79%, 10 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (8-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-8-oxooctyl)carbamate (132.4 mg, 163.57 μmol, 31.39% yield, 94% purity) as a white solid.
MS (M+H)+=761.7
1H NMR (400 MHz, Chloroform-d) δ 9.50-9.39 (m, 1H), 8.79 (d, J=8.5 Hz, 1H), 7.71 (t, J=7.9 Hz, 1H), 7.55 (d, J=7.3 Hz, 1H), 5.96 (d, J=9.6 Hz, 1H), 5.77 (t, J=7.5 Hz, 1H), 5.54-5.45 (m, 1H), 5.35-5.15 (m, 1H), 5.09-4.91 (m, 1H), 4.81 (s, 1H), 4.70-4.55 (m, 1H), 4.40-4.18 (m, 1H), 3.22-3.03 (m, 2H), 2.97-2.86 (m, 1H), 2.86-2.66 (m, 3H), 2.66-2.55 (m, 1H), 2.51-2.30 (m, 4H), 2.26-2.11 (m, 2H), 2.09-1.91 (m, 3H), 1.90-1.77 (m, 4H), 1.67-1.58 (m, 2H), 1.50-1.41 (m, 2H), 1.40-1.25 (m, 8H), 1.06 (d, J=7.3 Hz, 3H), 0.88 (dd, J=7.0, 2.2 Hz, 3H).
To a mixture of 2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetic acid (790 mg, 2.38 mmol) and tert-butyl (3-(aminomethyl)benzyl)carbamate (674.23 mg, 2.85 mmol) in DMF (10 mL) was added HATU (994.45 mg, 2.62 mmol) and DIPEA (921.87 mg, 7.13 mmol, 1.24 mL) in one portion at 25° C. and the resulting mixture was stirred at 25° C. for 2 h. LCMS showed the starting material was consumed completely and desired mass was detected. TLC (SiO2, Dichloromethane:Methanol=20:1) indicated the starting material was consumed completely and three new spots were detected. The reaction mixture was diluted with H2O (30 mL) and extracted with EtOAc (30 mL×3). The organic layer was washed with brine (30 mL×3). The organic layer was dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/3) to afford tert-butyl (3-((2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetamido)methyl)benzyl)carbamate (1.2 g, 2.05 mmol, 86.17% yield, 94% purity) as a yellow solid.
MS (M+H)+=551.2
To a mixture of tert-butyl (3-((2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetamido)methyl)benzyl)carbamate (1.2 g, 2.18 mmol) in dioxane (10 mL) was added HCl/dioxane (4 M, 20 mL) in one portion at 25° C. and the resulting mixture was stirred at 25° C. for 1 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was concentrated in vacuum to afford N-(3-(aminomethyl)benzyl)-2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetamide (1.06 g, crude, HCl) as a yellow solid.
MS (M+H)+=451.2
To a mixture of tert-butyl (3-((2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetamido)methyl)benzyl)carbamate (1.06 g, 2.18 mmol, HCl salt) and (1S,3R,7S,8,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (2.04 g, 2.18 mmol, 34.02 μL) in DMAC (15 mL) was added TEA (660.87 mg, 6.53 mmol, 909.04 μL) in one portion at 25° C. and the resulting mixture was stirred at 25° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was diluted with H2O (30 mL) and extracted with EtOAc (30 mL×3). The organic layer was dried over Na2SO4, filtrated and concentrated. The residue was purified by prep-HPLC (column: Waters Xbridge C18 150*50 mm*10 μm; mobile phase: [water (10 mM NH4HCO3)-ACN]; B %: 60%-90%, 11.5 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (3-((2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetamido)methyl)benzyl)carbamate (965 mg, 1.01 mmol, 46.22% yield, 95% purity) as a white solid.
MS (M+H)+=911.9
1H NMR (400 MHz, CDCl3) δ=7.88 (br s, 1H), 7.77-7.72 (m, 1H), 7.55 (d, J=7.4 Hz, 1H), 7.27-7.04 (m, 5H), 5.96 (br d, J=9.2 Hz, 1H), 5.77 (br dd, J=6.1, 9.4 Hz, 1H), 5.52 (br s, 1H), 5.39-5.17 (m, 2H), 5.14-4.88 (m, 1H), 4.75-4.64 (m, 3H), 4.62-4.41 (m, 3H), 4.39-4.12 (m, 3H), 2.92-2.14 (m, 10H), 1.91-1.46 (m, 7H), 1.28-1.24 (m, 1H), 1.12-1.02 (m, 3H), 0.90-0.87 (m, 12H), 0.07 (s, 6H).
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (3-((2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetamido)methyl)benzyl)carbamate (162 mg, 177.80 μmol) in THF (3 mL) was added AcOH (53.39 mg, 889.02 μmol, 50.84 μL), TBAF (1 M, 711.21 μL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 32 h. The reaction mixture was quenched with NH4Cl (sat.aq, 10 mL) and extracted with EtOAc (10 mL×3). The organic layer was washed with NH4Cl (sat.aq, 10 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by prep-HPLC (column: Unisil 3-100 C18 Ultra 150*50 mm*3 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 43%-63%, 10 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (3-((2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetamido)methyl)benzyl)carbamate (57.2 mg, 65.32 μmol, 36.74% yield, 91% purity) as a white solid.
MS (M+H)+=797.5
1H NMR (400 MHz, CDCl3) δ=8.07-7.86 (m, 1H), 7.79-7.73 (m, 1H), 7.57 (d, J=7.3 Hz, 1H), 7.31 (br d, J=12.3 Hz, 1H), 7.25-6.97 (m, 4H), 6.03-5.93 (m, 1H), 5.82-5.74 (m, 1H), 5.52 (s, 1H), 5.40-5.11 (m, 2H), 5.09-4.96 (m, 1H), 4.76-4.68 (m, 2H), 4.67-4.45 (m, 3H), 4.44-4.26 (m, 2H), 4.25-4.15 (m, 1H), 3.20-2.89 (m, 1H), 2.89-2.51 (m, 4H), 2.50-2.42 (m, 1H), 2.39-2.30 (m, 1H), 2.29-2.20 (m, 1H), 2.16-2.02 (m, 2H), 1.93-1.83 (m, 2H), 1.78-1.69 (m, 1H), 1.64-1.57 (m, 3H), 1.44-1.28 (m, 2H), 1.11 (br d, J=6.3 Hz, 3H), 0.92-0.83 (m, 3H).
To a mixture of 2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetic acid (800 mg, 2.41 mmol) and tert-butyl (2-(piperidin-4-yl)ethyl)carbamate (604.73 mg, 2.65 mmol) in DMF (10 mL) was added HATU (915.49 mg, 2.41 mmol), DIPEA (933.54 mg, 7.22 mmol, 1.26 mL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 1 h. LCMS showed starting material was consumed completely and desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=1:2) indicated starting material was consumed completely and one major new spot was detected. The reaction mixture was diluted with H2O (30 mL) and extracted with EtOAc (30 mL×3). The organic layer was washed with brine (30 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 0/1) to afford tert-butyl (2-(1-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetyl)piperidin-4-yl)ethyl)carbamate (1.1 g, 1.99 mmol, 82.52% yield, 98% purity) as an off-white solid.
MS (M+H)+=543.2
To solution of tert-butyl (2-(1-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetyl)piperidin-4-yl)ethyl)carbamate (1.1 g, 2.03 mmol) in dioxane (10 mL) was added HCl/dioxane (4 M, 20 mL) in on portion at 15° C. and the resulting mixture was stirred at 15° C. for 1 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was concentrated in vacuum to afford 4-(2-(4-(2-aminoethyl)piperidin-1-yl)-2-oxoethoxy)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (972 mg, crude, HCl salt) as a white solid.
MS (M+H)=443.1
To a mixture of 4-(2-(4-(2-aminoethyl)piperidin-1-yl)-2-oxoethoxy)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (872 mg, 1.82 mmol, HCl salt) in DMAC (10 mL) was added TEA (552.72 mg, 5.46 mmol, 760.28 μL) and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (3.74 g, 2.18 mmol) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was diluted with H2O (30 mL) and extracted with EtOAc (30 mL×3). The organic layer was dried over Na2SO4, filtrated and concentrated. The residue was purified by prep-HPLC (column: Waters Xbridge C18 150*50 mm*10 μm; mobile phase: [water (10 mM NH4HCO3)-ACN]; B %: 57%-87%, 11.5 min) followed by prep-HPLC (column: Unisil 3-100 C18 Ultra 150*50 mm*3 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 70%-90%, 10 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(1-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetyl)piperidin-4-yl)ethyl)carbamate (464.8 mg, 478.62 μmol, 26.29% yield, 93% purity) as a white solid.
MS (M+H)+=903.5
1H NMR (400 MHz, CDCl3) δ=7.68 (t, J=8.0 Hz, 1H), 7.51 (d, J=7.2 Hz, 1H), 7.40-7.28 (m, 1H), 5.98 (d, J=9.8 Hz, 1H), 5.78 (br dd, J=5.8, 9.3 Hz, 1H), 5.53 (br s, 1H), 5.14 (br s, 1H), 5.08-4.99 (m, 1H), 4.99-4.88 (m, 3H), 4.74-4.63 (m, 1H), 4.68 (br s, 1H), 4.47 (br s, 1H), 4.29 (br s, 1H), 4.15-3.92 (m, 1H), 3.20-2.95 (m, 2H), 2.94-2.69 (m, 3H), 2.65-2.51 (m, 3H), 2.43 (br s, 1H), 2.34 (br s, 1H), 2.26 (br d, J=11.4 Hz, 1H), 2.16-2.12 (m, 2H), 1.93-1.74 (m, 5H), 1.72-1.36 (m, 9H), 1.35-1.12 (m, 2H), 1.08 (br d, J=7.6 Hz, 3H), 0.97-0.88 (m, 12H), 0.08 (s, 6H)
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(1-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetyl)piperidin-4-yl)ethyl)carbamate (360 mg, 398.61 μmol) in THF (8 mL) was added TBAF (1 M, 1.59 mL) and AcOH (119.69 mg, 1.99 mmol, 113.99 μL) in one portion at 15° C. and the mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was quenched with NH4Cl (sat.aq, 30 mL) and extracted with EtOAc (30 mL×3). The organic layer was washed with NH4Cl (sat.aq, 30 mL×3). The organic layer was dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 0/1) followed by prep-HPLC (column: Waters Xbridge C18 150*50 mm*10 μm; mobile phase: [water (10 mM NH4HCO3)-ACN]; B %: 32%-62%, 11.5 min) to afford 312 mg impure product, which was re-purified by prep-TLC (SiO2, Ethyl acetate: Methanol=10:1) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(1-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetyl)piperidin-4-yl)ethyl)carbamate (67.6 mg, 83.12 μmol, 20.85% yield, 97% purity) as a white solid.
MS (M+H)+=789.5
1H NMR (400 MHz, CDCl3) δ=7.73-7.67 (m, 1H), 7.52 (d, J=7.2 Hz, 1H), 7.46-7.29 (m, 1H), 6.01-5.95 (m, 1H), 5.83-5.75 (m, 1H), 5.56-5.49 (m, 1H), 5.23-5.07 (m, 1H), 5.00-4.92 (m, 2H), 4.91-4.78 (m, 1H), 4.72-4.54 (m, 1H), 4.51-4.39 (m, 1H), 4.36-4.26 (m, 1H), 4.22-3.91 (m, 1H), 3.40-2.96 (m, 3H), 2.92-2.53 (m, 7H), 2.47-2.32 (m, 2H), 2.30-2.22 (m, 1H), 2.21-2.03 (m, 2H), 2.03-1.82 (m, 3H), 1.79-1.55 (m, 10H), 1.48-1.35 (m, 4H), 1.10-1.04 (m, 3H), 0.93-0.88 (m, 3H).
According to the above reaction scheme, in a manner similar to the other examples, the titled compound (83.7 mg, 91.40 μmol, 8.50% yield, 96% purity) was obtained as a yellow solid.
MS (M+H)+=879.3
1H NMR (400 MHz, CDCl3) δ=8.28-7.90 (m, 1H), 7.59-7.44 (m, 1H), 7.13 (d, J=7.1 Hz, 1H), 6.94 (d, J=8.4 Hz, 1H), 6.51 (br s, 1H), 5.99 (br d, J=8.8 Hz, 1H), 5.78 (br s, 1H), 5.52 (br s, 1H), 5.27-5.12 (m, 1H), 5.02-4.88 (m, 1H), 4.67 (br s, 1H), 4.30 (br s, 1H), 3.75-3.70 (m, 2H), 3.66-3.53 (m, 6H), 3.48 (br d, J=5.4 Hz, 2H), 3.31 (br s, 1H), 2.98 (s, 1H), 2.95-2.85 (m, 3H), 2.85-2.73 (m, 2H), 2.67-2.53 (m, 2H), 2.49-2.34 (m, 2H), 2.27 (br d, J=11.9 Hz, 1H), 2.19-2.08 (m, 2H), 1.95-1.61 (m, 6H), 1.46-1.22 (m, 3H), 1.07 (d, J=7.3 Hz, 3H), 0.94-0.87 (m, 12H), 0.09 (s, 6H).
To the solution of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl(2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)(methyl)carbamate (0.3 g, 341.25 μmol) in THF (10 mL) was added AcOH (102.46 mg, 1.71 mmol, 97.58 μL) and TBAF (1 M, 1.37 mL) and the resulting mixture was stirred at 25° C. for 12 h. LCMS showed the starting material was consumed and 66% desired mass was detected. The mixture was poured into water (50 mL) and extracted by EtOAc (50 mL×3). The combined organic layer was washed with brine (100 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex Luna C18 150*25 mm*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 45%-75%, 11 min) to afford 200 mg of product with 90% purity, which was re-purified by prep-HPLC (column: Unisil 3-100 C18 Ultra 150*50 mm*3 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 50%-70%, 10 min) to afford 100 mg of crude product with 81% purity, then the product was re-purified by prep-TLC (Ethyl acetate: Methanol=10:1) and the eluent was concentrated then lyophilized to get 50 mg of crude product with 84% purity, which was re-purified by prep-HPLC (column: Unisil 3-100 C18 Ultra 150*50 mm*3 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 45%-65%, 10 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl(2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethoxy)ethyl)(methyl)carbamate (16.6 mg, 21.70 μmol, 6.36% yield) as white solid.
MS (M+H)+=765.5
1H NMR (400 MHz, Chloroform-d) δ 7.50 (t, J=7.7 Hz, 1H), 7.17-7.05 (m, 1H), 6.90 (d, J=8.5 Hz, 1H), 6.61-6.43 (m, 1H), 5.97 (d, J=9.7 Hz, 1H), 5.83-5.73 (m, 1H), 5.50 (s, 1H), 5.28-5.16 (m, 1H), 5.03-4.88 (m, 1H), 4.68-4.56 (m, 1H), 4.35-4.19 (m, 1H), 3.71 (t, J=5.2 Hz, 2H), 3.68-3.59 (m, 4H), 3.59-3.49 (m, 2H), 3.47-3.41 (m, 2H), 2.97 (d, J=6.5 Hz, 1H), 2.89 (s, 3H), 2.80-2.67 (m, 3H), 2.66-2.59 (m, 1H), 2.59-2.48 (m, 1H), 2.48-2.30 (m, 2H), 2.25 (d, J=11.9 Hz, 1H), 2.18-2.05 (m, 2H), 2.03-1.82 (m, 3H), 1.77-1.62 (m, 3H), 1.42-1.24 (m, 3H), 1.05 (d, J=7.2 Hz, 3H), 0.94-0.85 (m, 3H)
To a mixture of tert-butyl 4-(2-hydroxyethyl) piperidine-1-carboxylate (5 g, 21.80 mmol) and TEA (6.62 g, 65.41 mmol, 9.10 mL) in DCM (50 mL) was added MsCl (2.75 g, 23.98 mmol, 1.86 mL) drop-wise at 0° C. and the resulting mixture was stirred at 15° C. for 16 h. TLC (SiO2, Petroleum ether:Ethyl acetate=1:1) indicated starting material was consumed completely and one new spot was detected. The reaction mixture was diluted H2O (150 mL) and extracted with DCM (150 mL×3). The organic layer was dried over Na2SO4, filtrated and concentrated in vacuum to afford tert-butyl 4-(2-((methylsulfonyl) oxy) ethyl) piperidine-1-carboxylate (6.6 g, crude) as a yellow solid.
1H NMR (400 MHz, CDCl3) δ=4.26 (t, J=6.4 Hz, 2H), 4.14-3.98 (m, 2H), 3.01-2.95 (m, 3H), 2.67 (br t, J=12.2 Hz, 2H), 1.71-1.55 (m, 5H), 1.43 (s, 9H), 1.18-1.05 (m, 2H).
To a mixture of 2-(2-hydroxyethyl)isoindoline-1,3-dione (1.86 g, 9.73 mmol) in DMF (20 mL) was added NaH (598.50 mg, 14.96 mmol, 60% purity) at 0° C., after stirring at 15° C. for 0.5 h, the reaction mixture cool to 0° C., then a solution of tert-butyl 4-(2-methylsulfonyloxyethyl)piperidine-1-carboxylate (2.3 g, 7.48 mmol) in DMF (10 mL) was added drop-wise and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=3:1) indicated starting material was consumed completely and three new spots were detected. The reaction mixture was combined with another batch (1.5 g scale) for work-up, the reaction mixture was quenched with saturated NH4Cl (100 mL) and extracted with EtOAc (100 mL×3). The organic layer was washed with brine (100 mL×3), dried over Na2SO4, filtrated and concentrated. The crude product was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 2/1) to afford tert-butyl (2-(2-(3-((2-(2, 6-dioxopiperidin-3-yl)-1, 3-dioxoisoindolin-4-yl) amino) propoxy) ethoxy) ethyl) carbamate (1.02 g, 2.53 mmol, 33.87% yield) as a yellow oil.
MS (M+H)+=403.4
To a mixture of tert-butyl (2-(2-(3-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl) amino) propoxy) ethoxy) ethyl) carbamate (1.02 g, 2.53 mmol) in EtOH (10 mL) was added NH2NH2.H2O (1.49 g, 25.34 mmol, 1.45 mL, 85% purity) in one portion at 15° C. and the resulting mixture was stirred at 80° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was filtrated and the filtrate was concentrated in vacuum. The residue was diluted with DCM (30 mL) and filtrated, the filtrated was concentrated in vacuum to afford tert-butyl 4-(2-(2-aminoethoxy) ethyl) piperidine-1-carboxylate (625 mg, crude) as a yellow oil.
MS (M+H)+=273.6
To a mixture of 2-(2,6-dioxo-3-piperidyl)-4-fluoro-isoindoline-1,3-dione (600 mg, 2.17 mmol) and tert-butyl 4-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethyl)piperidine-1-carboxylate (591.67 mg, 2.17 mmol) in DMF (6 mL) was added DIPEA (842.22 mg, 6.52 mmol, 1.14 mL) at 15° C. and the mixture was stirred at 90° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=1:1) indicated starting material was consumed completely and four new spots were detected. The reaction mixture was diluted with H2O (30 ml) and extracted with EtOAc (30 mL×3). The organic layer was washed with brine (30 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 1/1) followed by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15p m; mobile phase: [water (0.225% FA)-ACN]; B %: 49%-79%, 11 min) to afford tert-butyl 4-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethyl)piperidine-1-carboxylate (248 mg, 469.17 μmol, 21.60% yield, 100% purity) as a yellow solid.
MS (M+H)+=529.3
To a mixture of tert-butyl 4-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethyl)piperidine-1-carboxylate (248 mg, 469.17 μmol) in dioxane (4 mL) was added HCl/dioxane (4 M, 8 mL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 1 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was concentrated in vacuum to afford 2-(2, 6-dioxopiperidin-3-yl)-4-((2-(2-(piperidin-4-yl) ethoxy) ethyl) amino) isoindoline-1, 3-dione (220 mg, crude, HCl salt) as a yellow solid.
MS (M+H)+=429.3
To a mixture of 2-(2, 6-dioxopiperidin-3-yl)-4-((2-(2-(piperidin-4-yl) ethoxy) ethyl) amino) isoindoline-1, 3-dione (220 mg, 473.18 μmol, HCl salt) in DMAC (5 mL) was added TEA (143.64 mg, 1.42 mmol, 197.58 μL) and [(1S,3R,7S,8S,8aR)-8-[2-[(2R,4R)-4-[tert-butyl(dimethyl)silyl]oxy-6-oxo-tetrahydropyran-2-yl]ethyl]-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl] (4-nitrophenyl) carbonate (283.81 mg, 473.18 μmol) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=1:2) indicated starting material was consumed completely and two new spots were detected. The reaction mixture was diluted with H2O (15 mL) and extracted with EtOAc (15 mL×3). The organic layer was washed with brine (15 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/3) to afford (1S, 3R, 7S, 8S, 8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl4-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethyl)piperidine-1-carboxylate (345.8 mg, 377.24 μmol, 79.72% yield, 97% purity) as a yellow solid.
MS (M+H)+=889.5
1H NMR (400 MHz, CDCl3) δ=8.71-8.34 (m, 1H), 7.50 (t, J=7.8 Hz, 1H), 7.11 (d, J=7.1 Hz, 1H), 6.91 (d, J=8.4 Hz, 1H), 6.54-6.41 (m, 1H), 5.98 (d, J=9.8 Hz, 1H), 5.81-5.74 (m, 1H), 5.51 (br s, 1H), 5.22 (br s, 1H), 4.95-4.87 (m, 1H), 4.68-4.58 (m, 1H), 4.32-4.25 (m, 1H), 4.20-3.92 (m, 2H), 3.65 (br t, J=4.8 Hz, 2H), 3.52 (br s, 2H), 3.44 (br d, J=4.6 Hz, 2H), 3.02 (s, 1H), 2.95 (s, 1H), 2.90-2.81 (m, 1H), 2.79-2.68 (m, 4H), 2.60-2.50 (m, 2H), 2.46-2.34 (m, 2H), 2.26 (br d, J=12.0 Hz, 1H), 2.16-2.07 (m, 3H), 1.94-1.80 (m, 3H), 1.71-1.59 (m, 6H), 1.39-1.21 (m, 3H), 1.06-1.04 (m, 3H), 0.92-0.84 (m, 12H), 0.07 (d, J=3.8 Hz, 6H).
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl4-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethyl)piperidine-1-carboxylate (244 mg, 274.42 μmol) in THF (5 mL) was added AcOH (82.40 mg, 1.37 mmol, 78.47 μL) and TBAF (1 M, 1.10 mL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed 7% of starting material remained and 84% desired mass was detected. The reaction mixture was quenched with saturated NH4Cl (15 mL) and extracted with EtOAc (15 mL×3). The organic layer was washed with saturated NH4Cl (15 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 52%-82%, 11 min) to afford (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl4-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethyl)piperidine-1-carboxylate (83.6 mg, 102.49 μmol, 37.35% yield, 95% purity) as a yellow solid.
MS (M+H)+=775.5
1H NMR (400 MHz, CDCl3) δ 7.56-7.46 (m, 1H), 7.12 (d, J=7.0 Hz, 1H), 6.88 (dd, J=8.6, 5.2 Hz, 1H), 6.53-6.42 (m, 1H), 6.03-5.94 (m, 1H), 5.83-5.71 (m, 1H), 5.55-5.45 (m, 1H), 5.36-5.18 (m, 1H), 5.00-4.85 (m, 1H), 4.74-4.38 (m, 1H), 4.38-4.22 (m, 1H), 4.22-3.91 (m, 2H), 3.85-3.50 (m, 4H), 3.50-3.30 (m, 2H), 3.02-2.48 (m, 8H), 2.48-1.99 (m, 6H), 1.99-1.76 (m, 3H), 1.75-1.60 (m, 4H), 1.53-1.20 (m, 5H), 1.11-0.96 (m, 5H), 0.89 (t, J=6.7 Hz, 3H).
In a manner similar to Step 1 of Example 2, the titled compound (1.8 g, 3.71 mmol, 41.03% yield, 95% purity) was obtained as a green solid.
MS [M+H]+=461.2
In a manner similar to Step 2 of Example 2, the titled compound (2.2 g, crude, HCl salt) was obtained as a green solid.
To a solution of 4-((2-(2-aminoethoxy)ethyl)amino)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (800 mg, 2.02 mmol, HCl salt) in DMAC (8 mL) was added TEA (611.99 mg, 6.05 mmol, 841.80 μL) followed by (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (3.45 g, 2.02 mmol). The mixture was stirred at 20° C. for 16 hours. LCMS showed 14% of desired mass was detected. The reaction mixture was filtered and the filtrate was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 70%-100%, 10 min). Compound (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethyl)carbamate (450.8 mg, 538.08 μmol, 26.69% yield, 98% purity)) was obtained as a yellow solid.
MS [M+H]+=821.6.
1H NMR (400 MHz, DMSO-d6) δ=11.09 (s, 1H), 7.57 (dd, J1=8.4 Hz, J2=7.3 Hz, 1H), 7.13 (d, J=8.7 Hz, 1H), 7.07-6.96 (m, 2H), 6.59 (t, J=5.5 Hz, 1H), 5.91 (d, J=9.7 Hz, 1H), 5.81-5.67 (m, 1H), 5.46 (s, 1H), 5.11-4.96 (m, 2H), 4.52-4.41 (m, 1H), 4.31-4.23 (m, 1H), 3.63-3.51 (m, 2H), 3.57-3.40 (m, 4H), 3.11 (m, 2H), 2.95-2.83 (m, 1H), 2.70-2.64 (m, 1H), 2.63-2.52 (m, 2H), 2.39-2.28 (m, 3H), 2.26-2.20 (m, 1H), 2.06-1.98 (m, 1H), 1.89-1.73 (m, 3H), 1.66 (t, J=11.7 Hz, 3H), 1.51-1.41 (m, 1H), 1.36-1.20 (m, 2H), 1.02 (d, J=7.3 Hz, 3H), 0.83-0.73 (m, 12H), 0.04 (s, 6H).
To a solution of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethyl)carbamate (250 mg, 298.40 μmol) in THF (5 mL) was added AcOH (89.60 mg, 1.49 mmol, 85.33 μL) followed by TBAF (1 M, 1.19 mL). The mixture was stirred at 20° C. for 16 hours. LCMS showed 93% of desired mass was detected. The reaction mixture was diluted with H2O (20 mL) and extracted with EtOAc (30 mL×3). The combined organic layers were washed with NH4Cl (sat.aq, 50 mL×3), dried over Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by prep-HPLC (column: Phenomenex Luna C18 150*25 mm*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 42%-72%, 9 min). Compound (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethyl)carbamate (100.9 mg, 134.19 μmol, 44.97% yield, 94% purity)) was obtained as a yellow solid.
MS [M+H]+=707.1.
1H NMR (400 MHz, DMSO-d6) δ=11.09 (s, 1H), 7.57 (dd, J1=8.4 Hz, J2=7.3 Hz, 1H), 7.14 (d, J=8.7 Hz, 1H), 7.07-6.93 (m, 2H), 6.59 (t, J=5.4 Hz, 1H), 5.91 (d, J=9.7 Hz, 1H), 5.81-5.68 (m, 1H), 5.46 (s, 1H), 5.17 (d, J=3.4 Hz, 1H), 5.10-4.98 (m, 2H), 4.54-4.38 (m, 1H), 4.13-3.93 (m, 1H), 3.63-3.51 (m, 2H), 3.49-3.36 (m, 4H), 3.19-3.05 (m, 2H), 2.94-2.82 (m, 1H), 2.69-2.52 (m, 3H), 2.40 (s, 3H), 2.23 (d, J=12.4 Hz, 1H), 2.06-1.98 (m, 1H), 1.90-1.75 (m, 3H), 1.72-1.56 (m, 3H), 1.51-1.43 (m, 1H), 1.35-1.21 (m, 2H), 1.02 (d, J=7.3 Hz, 3H), 0.83 (d, J=6.7 Hz, 3H).
According to the above reaction scheme, in a manner similar to the other examples, the titled compound (964 mg, crude, HCl salt) as a white solid. MS (M+H)+=417.2
In a manner similar to Step 3 of Example 51, 58, the titled compound (574.7 mg, 642.09 μmol, 30.29% yield, 98% purity) was obtained as a yellow solid.
MS (M+H)+=877.6
1H NMR (400 MHz, Chloroform-d) δ 8.04 (s, 1H), 7.49 (dd, J=8.5, 7.1 Hz, 1H), 7.09 (d, J=7.0 Hz, 1H), 6.89 (d, J=8.5 Hz, 1H), 6.35-6.23 (m, 1H), 5.97 (d, J=9.6 Hz, 1H), 5.77 (dd, J=9.6, 6.0 Hz, 1H), 5.51 (s, 1H), 5.18 (s, 1H), 5.02-4.86 (m, 2H), 4.68-4.58 (m, 1H), 4.35-4.22 (m, 1H), 3.42 (dt, J=12.0, 6.0 Hz, 4H), 3.36-3.18 (m, 3H), 3.18-3.01 (m, 1H), 2.98-2.66 (m, 3H), 2.66-2.50 (m, 2H), 2.50-2.29 (m, 2H), 2.24 (d, J=12.0 Hz, 1H), 2.19-2.06 (m, 2H), 1.94-1.58 (m, 11H), 1.47-1.23 (m, 2H), 1.07 (d, J=7.4 Hz, 3H), 0.88 (d, J=2.4 Hz, 12H), 0.07 (d, J=0.8 Hz, 6H)
In a manner similar to Step 4 of Example 51, 58, the titled compound (178.4 mg, 215.14 μmol, 47.18% yield, 92% purity) was obtained as a yellow solid.
MS (M+H)+=763.5
1H NMR (400 MHz, CDCl3) δ=8.36 (br d, J=15.0 Hz, 1H), 7.50 (t, J=7.8 Hz, 1H), 7.10 (d, J=6.8 Hz, 1H), 6.90 (d, J=8.6 Hz, 1H), 6.30 (br s, 1H), 5.98 (d, J=9.6 Hz, 1H), 5.85-5.73 (m, 1H), 5.52 (br s, 1H), 5.22 (br s, 1H), 4.93 (br s, 2H), 4.62 (br s, 1H), 4.30 (br s, 1H), 3.45 (td, J=5.4, 10.4 Hz, 4H), 3.31 (br d, J=5.4 Hz, 2H), 3.20 (br d, J=5.8 Hz, 2H), 2.94-2.68 (m, 4H), 2.64-2.50 (m, 2H), 2.49-2.33 (m, 2H), 2.25 (br d, J=10.4 Hz, 1H), 2.18-2.02 (m, 2H), 2.00-1.83 (m, 3H), 1.78-1.65 (m, 7H), 1.58-1.51 (m, 4H), 1.42-1.31 (m, 2H), 1.08 (d, J=7.4 Hz, 3H), 0.90 (br d, J=7.0 Hz, 3H).
In a manner similar to Step 3 of Example 51, 58, the titled compound (520.7 mg, 586.37 μmol, 29.92% yield, 99% purity) was obtained as a yellow solid.
MS (M+H)+=879.5
1H NMR (400 MHz, CDCl3) δ=8.34 (br s, 1H), 7.50 (t, J=7.8 Hz, 1H), 7.12 (d, J=7.0 Hz, 1H), 6.92 (d, J=8.6 Hz, 1H), 6.51 (br s, 1H), 5.98 (d, J=9.7 Hz, 1H), 5.82-5.74 (m, 1H), 5.52 (br s, 1H), 5.22 (br s, 1H), 5.13 (br s, 1H), 4.98-4.86 (m, 1H), 4.68-4.55 (m, 1H), 4.32-4.25 (m, 1H), 3.68-3.63 (m, 2H), 3.58-3.51 (m, 4H), 3.49-3.38 (m, 5H), 3.32-3.23 (m, 1H), 2.92-2.72 (m, 3H), 2.62-2.52 (m, 2H), 2.46-2.34 (m, 2H), 2.25 (br d, J=9.2 Hz, 1H), 2.18-2.07 (m, 2H), 1.92-1.74 (m, 6H), 1.70-1.62 (m, 2H), 1.46-1.30 (m, 2H), 1.08 (d, J=6.8 Hz, 3H), 0.92-0.88 (m, 12H), 0.08 (s, 6H).
In a manner similar to Step 4 of Example 51, 58, the titled compound (326.8 mg, 405.90 μmol, 89.21% yield, 95% purity) was obtained as a yellow solid.
MS (M+H)+=765.4
1H NMR (400 MHz, CDCl3) δ=7.55-7.48 (m, 1H), 7.13 (t, J=6.9 Hz, 1H), 6.91 (d, J=8.5 Hz, 1H), 6.58-6.46 (m, 1H), 5.97 (d, J=9.6 Hz, 1H), 5.85-5.70 (m, 1H), 5.52 (br s, 1H), 5.25 (br s, 1H), 5.21-5.09 (m, 1H), 4.99-4.89 (m, 1H), 4.67-4.50 (m, 1H), 4.36-4.11 (m, 1H), 3.74-3.40 (m, 11H), 3.36-3.17 (m, 1H), 3.01-2.69 (m, 4H), 2.66-2.55 (m, 1H), 2.45-2.34 (m, 2H), 2.25 (br d, J=12.3 Hz, 1H), 2.17-2.11 (m, 1H), 2.11-2.02 (m, 1H), 2.02-1.94 (m, 1H), 1.91-1.80 (m, 4H), 1.72 (br d, J=10.8 Hz, 2H), 1.65-1.52 (m, 3H), 1.40-1.29 (m, 2H), 1.08 (d, J=7.4 Hz, 3H), 0.89 (dd, J=4.6, 6.9 Hz, 3H).
In a manner similar to Step 3 of Example 51, 58, the titled compound (942.3 mg, 1.06 mmol, 50.28% yield, 99% purity) was obtained as a yellow solid.
MS (M+H)+=879.6
1H NMR (400 MHz, CDCl3) δ=8.13 (br s, 1H), 7.54-7.47 (m, 1H), 7.09 (d, J=6.8 Hz, 1H), 6.92 (d, J=8.6 Hz, 1H), 6.45 (br s, 1H), 5.97 (d, J=9.8 Hz, 1H), 5.78 (dd, J=6.1, 9.6 Hz, 1H), 5.51 (br s, 1H), 5.22 (br s, 2H), 4.92 (br dd, J=5.0, 11.6 Hz, 1H), 4.70-4.60 (m, 1H), 4.32-4.24 (m, 1H), 3.65-3.61 (m, 2H), 3.61-3.52 (m, 6H), 3.40 (q, J=6.0 Hz, 2H), 3.35-3.27 (m, 1H), 2.93-2.84 (m, 1H), 2.82-2.69 (m, 2H), 2.64-2.51 (m, 2H), 2.46-2.33 (m, 2H), 2.25 (br d, J=11.2 Hz, 1H), 2.17-2.06 (m, 2H), 1.97-1.74 (m, 6H), 1.68-1.59 (m, 2H), 1.46-1.27 (m, 2H), 1.07 (d, J=7.4 Hz, 3H), 0.93-0.83 (m, 12H), 0.08 (s, 6H).
In a manner similar to Step 4 of Example 51, 58, the titled compound (389.4 mg, 468.38 μmol, 49.02% yield, 92% purity) was obtained as a yellow solid.
MS (M+H)+=765.5
1H NMR (400 MHz, CDCl3) δ=8.77-8.47 (m, 1H), 7.53-7.47 (m, 1H), 7.09 (dd, J=1.4, 7.0 Hz, 1H), 6.91 (d, J=8.6 Hz, 1H), 6.55 (br s, 1H), 5.97 (d, J=9.6 Hz, 1H), 5.81-5.74 (m, 1H), 5.51 (br s, 1H), 5.38-5.14 (m, 2H), 4.99-4.89 (m, 1H), 4.68-4.54 (m, 1H), 4.34-4.24 (m, 1H), 3.71-3.54 (m, 8H), 3.45-3.32 (m, 4H), 2.96-2.63 (m, 5H), 2.63-2.52 (m, 1H), 2.47-2.31 (m, 2H), 2.28-2.22 (m, 1H), 2.18-2.11 (m, 1H), 2.08-2.04 (m, 1H), 1.95-1.92 (m, 3H), 1.90-1.78 (m, 2H), 1.72-1.60 (m, 3H), 1.42-1.30 (m, 2H), 1.07 (d, J=7.4 Hz, 3H), 0.89 (dd, J=1.6, 6.9 Hz, 3H).
In a manner similar to Step 3 of Example 51, 58, the titled compound (620 mg, 656.10 μmol, 27.55% yield, 96% purity) was obtained as a yellow solid.
MS (M+H)+=907.6
1H NMR (400 MHz, CDCl3) δ=8.15 (br s, 1H), 7.50 (dd, J=7.4, 8.4 Hz, 1H), 7.09 (d, J=7.0 Hz, 1H), 6.92 (d, J=8.6 Hz, 1H), 6.52-6.40 (m, 1H), 5.97 (d, J=9.8 Hz, 1H), 5.77 (dd, J=6.2, 9.5 Hz, 1H), 5.58-5.49 (m, 1H), 5.28-5.15 (m, 1H), 5.14-5.03 (m, 1H), 4.95-4.88 (m, 1H), 4.64 (br dd, J=3.2, 8.0 Hz, 1H), 4.29 (br s, 1H), 3.55-3.37 (m, 10H), 3.35-3.25 (m, 1H), 3.25-3.15 (m, 1H), 2.92-2.84 (m, 1H), 2.83-2.69 (m, 2H), 2.64-2.55 (m, 2H), 2.46-2.33 (m, 2H), 2.25 (br dd, J=2.0, 12.2 Hz, 1H), 2.17-2.07 (m, 2H), 1.89-1.89 (m, 1H), 1.97-1.81 (m, 7H), 1.76-1.71 (m, 2H), 1.69-1.62 (m, 2H), 1.47-1.37 (m, 1H), 1.36-1.27 (m, 1H), 1.08 (d, J=7.4 Hz, 3H), 0.91-0.89 (m, 12H), 0.08 (s, 6H).
In a manner similar to Step 4 of Example 51, 58, the titled compound (188.9 mg, 223.94 μmol, 39.83% yield, 94% purity) was obtained as a yellow solid.
MS (M+H)+=793.5
1H NMR (400 MHz, CDCl3) δ=8.73-8.47 (m, 1H), 7.53-7.47 (m, 1H), 7.09 (d, J=7.1 Hz, 1H), 6.91 (d, J=8.6 Hz, 1H), 6.60-6.49 (m, 1H), 5.97 (d, J=9.8 Hz, 1H), 5.78 (dd, J=6.2, 9.6 Hz, 1H), 5.51 (br s, 1H), 5.33-5.21 (m, 1H), 5.19-4.98 (m, 1H), 4.98-4.88 (m, 1H), 4.69-4.55 (m, 1H), 4.36-4.25 (m, 1H), 3.57-3.37 (m, 10H), 3.25 (br d, J=6.2 Hz, 2H), 2.98-2.65 (m, 5H), 2.64-2.52 (m, 1H), 2.48-2.33 (m, 2H), 2.25 (br d, J=11.0 Hz, 1H), 2.17-2.10 (m, 1H), 2.08-2.01 (m, 1H), 1.97-1.81 (m, 7H), 1.75-1.62 (m, 5H), 1.43-1.30 (m, 2H), 1.08 (d, J=7.4 Hz, 3H), 0.90 (d, J=7.0 Hz, 3H).
In a manner similar to Step 3 of Example 51, 58, the titled compound (628.6 mg, 642.84 μmol, 32.43% yield, 94% purity) was obtained as a white solid.
MS (M+H)+=919.8
1H NMR (400 MHz, Chloroform-d) δ 8.38 (d, J=18.3 Hz, 1H), 7.75 (t, J=7.9 Hz, 1H), 7.55 (d, J=7.3 Hz, 1H), 7.47-7.35 (m, 1H), 7.19 (d, J=8.4 Hz, 1H), 5.97 (d, J=9.6 Hz, 1H), 5.78 (t, J=7.8 Hz, 1H), 5.52 (s, 1H), 5.17 (s, 1H), 4.97 (dd, J=12.4, 5.1 Hz, 1H), 4.90-4.82 (m, 1H), 4.72-4.58 (m, 3H), 4.33-4.24 (m, 1H), 3.36 (q, J=6.6 Hz, 2H), 3.29-3.15 (m, 1H), 3.15-2.99 (m, 1H), 2.99-2.71 (m, 3H), 2.66-2.48 (m, 2H), 2.48-2.31 (m, 2H), 2.24 (d, J=11.8 Hz, 1H), 2.20-2.06 (m, 2H), 1.92-1.71 (m, 4H), 1.70-1.63 (m, 2H), 1.50-1.40 (m, 3H), 1.40-1.21 (m, 11H), 1.07 (d, J=7.3 Hz, 3H), 0.92-0.86 (m, 12H), 0.07 (d, J=1.5 Hz, 6H).
In a manner similar to Step 4 of Example 51, 58, the titled compound (50.5 mg, 60.23 μmol, 17.30% yield, 96% purity) was obtained as a white solid.
MS (M+H)+=805.6
1H NMR (400 MHz, CDCl3) δ=7.79-7.74 (m, 1H), 7.57 (d, J=7.2 Hz, 1H), 7.52-7.45 (m, 1H), 7.21 (d, J=8.4 Hz, 1H), 5.98 (d, J=9.5 Hz, 1H), 5.79 (dd, J=6.1, 9.6 Hz, 1H), 5.52 (br s, 1H), 5.28-5.20 (m, 1H), 5.03-4.96 (m, 1H), 4.88-4.76 (m, 1H), 4.70-4.60 (m, 3H), 4.36-4.22 (m, 1H), 3.46-3.29 (m, 2H), 3.24-3.07 (m, 2H), 3.05-2.78 (m, 4H), 2.71-2.62 (m, 1H), 2.60-2.51 (m, 1H), 2.49-2.33 (m, 2H), 2.29-2.21 (m, 1H), 2.17 (br dd, J=5.7, 7.6 Hz, 1H), 2.09-1.98 (m, 2H), 1.92-1.81 (m, 2H), 1.73-1.59 (m, 4H), 1.49-1.23 (m, 14H), 1.08 (d, J=7.3 Hz, 3H), 0.90 (dd, J=2.3, 7.0 Hz, 3H).
To a mixture of 4-amino-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (800 mg, 2.93 mmol) and 2-[2-[2-[2-(tert-butoxycarbonylamino)ethoxy]ethoxy]ethoxy]acetic acid (899.82 mg, 2.93 mmol) in DMF (10 mL) was added T3P (11.18 g, 17.57 mmol, 10.45 mL, 50% purity), Py (2.32 g, 29.28 mmol, 2.36 mL) in one portion at 25° C. The mixture was stirred at 80° C. for 16 h. LCMS showed starting material was consumed completely and 87% desired mass (MS-100) was detected.
TLC (SiO2, Petroleum ether:Ethyl acetate=10:1) indicated starting material was consumed completely and one major new spot was detected. The reaction mixture was combined with another batch (100 mg scale) for work-up, the reaction mixture was diluted with H2O (30 mL) and extracted with EtOAc (30 mL×3). The organic layer was washed with brine (30 mL×3), dried over Na2SO4, filtrated and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=3/1 to 0/1). Compound tert-butyl (2-(2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-2-oxoethoxy)ethoxy)ethoxy)ethyl)carbamate (1.42 g, 2.45 mmol, 83.63% yield, 97% purity) was obtained as a yellow solid.
MS (M+H)+=563.2
In a manner similar to Step 2 of Example 2, the titled compound (1.22 g, crude, HCl salt) was obtained as a yellow solid.
MS (M+H)+=463.2
In a manner similar to Step 3 of Example 51, 58, the titled compound (821.3 mg, 827.41 μmol, 31.36% yield, 93% purity) was obtained as a white solid.
MS (M+H)+=923.6
1H NMR (400 MHz, Chloroform-d) δ 10.48 (s, 1H), 8.85 (d, J=8.4 Hz, 1H), 8.52 (s, 1H), 7.73 (dd, J=8.5, 7.3 Hz, 1H), 7.58 (d, J=7.3 Hz, 1H), 5.96 (dd, J=9.7, 3.5 Hz, 1H), 5.82-5.70 (m, 1H), 5.57-5.39 (m, 2H), 5.19 (s, 1H), 5.02-4.91 (m, 1H), 4.70-4.57 (m, 1H), 4.33-4.24 (m, 1H), 4.19 (d, J=3.5 Hz, 2H), 3.79 (s, 4H), 3.71-3.47 (m, 6H), 3.44-3.24 (m, 2H), 2.95-2.83 (m, 1H), 2.83-2.70 (m, 2H), 2.64-2.49 (m, 2H), 2.46-2.31 (m, 2H), 2.27-2.12 (m, 2H), 2.07 (dd, J=14.6, 3.8 Hz, 1H), 1.92-1.76 (m, 3H), 1.74-1.63 (m, 3H), 1.49-1.22 (m, 2H), 1.05 (dd, J=7.4, 3.2 Hz, 3H), 0.93-0.81 (m, 12H), 0.07 (s, 6H).
In a manner similar to Step 4 of Example 51, 58, the titled compound (102.6 mg, 124.31 μmol, 16.16% yield, 98% purity) was obtained as a white solid.
MS (M+H)+=809.5
1H NMR (400 MHz, Chloroform-d) δ 10.47 (s, 1H), 9.06-8.82 (m, 2H), 7.79-7.69 (m, 1H), 7.59 (d, J=7.3 Hz, 1H), 5.96 (t, J=8.9 Hz, 1H), 5.76 (t, J=7.7 Hz, 1H), 5.51 (d, J=11.6 Hz, 1H), 5.47-5.30 (m, 1H), 5.22 (s, 1H), 5.05-4.92 (m, 1H), 4.61 (s, 1H), 4.36-4.25 (m, 1H), 4.25-4.13 (m, 2H), 3.80 (s, 4H), 3.74-3.65 (m, 2H), 3.64-3.44 (m, 4H), 3.41-3.25 (m, 2H), 2.99-2.66 (m, 5H), 2.63-2.50 (m, 1H), 2.50-2.28 (m, 2H), 2.28-2.10 (m, 2H), 2.10-1.92 (m, 2H), 1.92-1.77 (m, 2H), 1.77-1.68 (m, 2H), 1.47-1.29 (m, 2H), 1.05 (t, J=7.4 Hz, 3H), 0.88 (d, J=6.8 Hz, 3H).
To a solution of 3-(tert-butoxycarbonylamino) propanoic acid (1.47 g, 2.72 mmol) in DMF (15 mL) was added DIEA (2.51 g, 19.42 mmol, 3.38 mL) and HATU (2.22 g, 5.83 mmol). The mixture was stirred at 20° C. for 25 minutes, then to this mixture was added 4-((2-(2-aminoethoxy)ethyl)amino)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (1.4 g, 3.88 mmol). The mixture was stirred at 20° C. for 2 hours. LCMS showed 87% of desired mass was detected. The reaction mixture was diluted with H2O (40 mL) and extracted with EtOAc (40 mL×3). The combined organic layers were washed with brine (80 mL×3), dried over Na2SO4, filtered and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/1). Compound tert-butyl (3-((2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethyl)amino)-3-oxopropyl)carbamate (2.1 g, 3.79 mmol, 97.62% yield, 96% purity)) was obtained as a green solid. MS [M+H]+=532.4.
In a manner similar to Step 2 of Example 2, the titled compound (3.5 g, crude, HCl salt) was obtained as a yellow solid.
In a manner similar to Step 3 of Example 51, 58, the titled compound (1.13 g, 1.22 mmol, 17.70% yield, 96% purity) was obtained as a yellow solid.
MS [M+H]+=892.6
1H NMR (400 MHz, DMSO-d6) δ=11.09 (s, 1H), 7.83 (t, J=5.5 Hz, 1H), 7.58 (dd, J1=9.5 Hz, J2=7.2 Hz, 1H), 7.14 (d, J=8.7 Hz, 1H), 7.04 (d, J=7.0 Hz, 1H), 6.92 (t, J=5.5 Hz, 1H), 6.61 (t, J=5.6 Hz, 1H), 5.90 (d, J=9.8 Hz, 1H), 5.75 (dd, J1=9.5 Hz, J2=6.0 Hz, 1H), 5.45 (s, 1H), 5.15-4.96 (m, 2H), 4.54-4.42 (m, 1H), 4.33-4.24 (m, 1H), 3.65-3.54 (m, 2H), 3.50-3.39 (m, 4H), 3.22-3.07 (m, 4H), 2.95-2.82 (m, 1H), 2.68 (dd, J1=17.2 Hz, J2=4.1 Hz, 1H), 2.63-2.52 (m, 2H), 2.39-2.30 (m, 3H), 2.22 (t, J=7.2 Hz, 3H), 2.06-1.98 (m, 1H), 1.88-1.76 (m, 3H), 1.74-1.61 (m, 3H), 1.52-1.42 (m, 1H), 1.40-1.31 (m, 1H), 1.29-1.20 (m, 1H), 1.02 (d, J=7.4 Hz, 3H), 0.86-0.81 (m, 12H), 0.05 (s, 6H).
In a manner similar to Step 4 of Example 51, 58, the titled compound (122.6 mg, 146.58 μmol, 45.40% yield, 93% purity) was obtained as a yellow solid.
MS [M+H]+=778.1
1H NMR (400 MHz, DMSO-d6) δ=11.09 (s, 1H), 7.90-7.75 (m, 1H), 7.59 (dd, J1=8.4 Hz, J2=7.2 Hz, 1H), 7.14 (d, J=8.5 Hz, 1H), 7.04 (d, J=7.0 Hz, 1H), 6.93 (t, J=5.7 Hz, 1H), 6.61 (t, J=5.8 Hz, 1H), 5.90 (d, J=9.8 Hz, 1H), 5.76 (dd, J1=9.5 Hz, J2=6.0 Hz, 1H), 5.45 (s, 1H), 5.18 (d, J=2.9 Hz, 1H), 5.10-4.98 (m, 2H), 4.46-4.51 (m, 1H), 4.15-4.04 (m, 1H), 3.64-3.55 (m, 2H), 3.49-3.40 (m, 4H), 3.22-3.09 (m, 4H), 2.93-2.82 (m, 1H), 2.68-2.52 (m, 3H), 2.41-2.31 (m, 3H), 2.26-2.18 (m, 3H), 2.06-1.98 (m, 1H), 1.89-1.76 (m, 3H), 1.71-1.56 (m, 3H), 1.52-1.43 (m, 1H), 1.38-1.21 (m, 2H), 1.02 (d, J=7.4 Hz, 3H), 0.83 (d, J=6.9 Hz, 3H).
To a solution of 1H-imidazole-4-carboxylic acid (23 g, 205.20 mmol) in MeOH (180 mL) was added SOCl2 (122.06 g, 1.03 mol, 74.43 mL). The reaction mixture was stirred at 70° C. for 16 h.
The reaction mixture was concentrated under reduced pressure. Compound (Methyl 1H-imidazole-4-carboxylate (33 g, crude, HCl salt) was obtained as a black solid.
1H NMR (400 MHz, DMSO-d6) δ=14.78-12.34 (m, 2H), 9.30 (s, 1H), 8.35 (s, 1H), 8.27 (s, 1H), 3.84 (s, 3H).
To a solution of methyl 1H-imidazole-4-carboxylate (3.3 g, 20.30 mmol, HCl salt) in ACN (50 mL) was added K2CO3 (14.03 g, 101.49 mmol) and tert-butyl N-(3-bromopropyl)carbamate (6.77 g, 28.42 mmol). The mixture was stirred at 15° C. for 16 h. TLC (SiO2, Ethyl acetate/MeOH=10/1) indicated 30% of starting material remained and two new spots with lower polarity were detected. The reaction mixture was concentrated under reduced pressure, the residue was then diluted with H2O (30 mL) and extracted with EtOAc (80 mL×3). The combined organic layers were washed with brine (80 mL×2), dried over Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=4/3 to 0/1). Compound (methyl 1-[3-(tert-butoxycarbonylamino)propyl]imidazole-4-carboxylate (2.9 g, 9.31 mmol, 45.89% yield, 91% purity) was obtained as a colorless oil.
MS (M+H)+=284.2
1H NMR (400 MHz, DMSO-d6) δ=7.94 (s, 1H), 7.76 (s, 1H), 6.93 (t, J=4.7 Hz, 1H), 4.02-3.98 (m, 2H), 3.73 (s, 3H), 2.87 (q, J=6.2 Hz, 2H), 1.86-1.78 (m, 2H), 1.37 (s, 9H).
A mixture of Methyl 1-[3-(tert-butoxycarbonylamino)propyl]imidazole-4-carboxylate (2.9 g, 9.31 mmol) in THE (45 mL) was added LiAlH4 (636.34 mg, 16.77 mmol) slowly at 0° C. After addition, the resulting mixture was stirred at 20° C. for 2 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was quenched with H2O (4 mL) and NaOH solution (15%, 6 mL) at 0° C. The suspension was dried over Na2SO4, filtered and the filtrate was concentrated under reduced pressured. Compound (tert-butyl N-[3-[4-(hydroxymethyl)imidazol-1-yl]propyl]carbamate (2.4 g, 8.55 mmol, 91.84% yield, 91% purity) was obtained as a colorless oil.
MS (M+H)+=256.2
To a solution of tert-butyl N-[3-[4-(hydroxymethyl)imidazol-1-yl]propyl]carbamate (2.4 g, 8.55 mmol) in THE (50 mL) was added DPPA (3.53 g, 12.83 mmol, 2.78 mL) and DBU (3.26 g, 21.39 mmol, 3.22 mL) at 0° C. and the reaction mixture was stirred at 20° C. for 16 h. LCMS showed starting material was consumed completely and 60% of desired mass was detected. The mixture was diluted with H2O (100 mL) and extracted with EtOAc (100 mL×3). The combined organic layers were washed with brine (200 mL×2), dried over Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by column chromatography (SiO2, Petroleum ether/MeOH=20/1). Compound (tert-butyl N-[3-[4-(azidomethyl)imidazol-1-yl]propyl]carbamate (2.3 g, 5.74 mmol, 67.14% yield, 70% purity) was obtained as a colorless oil.
MS (M+H)+=281.1
To a solution of tert-butyl N-[3-[4-(azidomethyl)imidazol-1-yl]propyl]carbamate (2.3 g, 5.74 mmol) in MeOH (40 mL) was added Pd/C (600 mg, 5.74 mmol, 10% purity). The mixture was then degassed and purged with N2 for 3 times and then degassed and purged with H2 for 3 times. The reaction mixture was stirred at 20° C. for 12 hours at H2 atmosphere. The reaction mixture was filtered and concentrated under reduced pressure. Compound (tert-butyl N-[3-[4-(aminomethyl)imidazol-1-yl]propyl]carbamate (1.85 g, crude)) was obtained as a colorless oil.
In a manner similar to Step 1 of Example 2, the titled compound (1.05 g, 2.02 mmol, 31.07% yield, 98% purity) was obtained as a yellow solid.
MS (M+H)+=511.2
In a manner similar to Step 2 of Example 2, the titled compound (1.34 g, crude, HCl salt) was obtained as a yellow solid.
MS (M+H)+=411.2
In a manner similar to Step 3 of Example 51, 58, the titled compound (1.08 g, 1.19 mmol, 41.28% yield, 96% purity) was obtained as a yellow solid.
MS (M+H)+=871.3
1H NMR (400 MHz, Chloroform-d) δ 8.81 (s, 1H), 7.54-7.40 (m, 2H), 7.08 (d, J=7.1 Hz, 1H), 6.97 (d, J=8.6 Hz, 1H), 6.85 (s, 1H), 6.67 (t, J=5.8 Hz, 1H), 5.97 (d, J=9.6 Hz, 1H), 5.76 (dd, J=9.6, 6.0 Hz, 1H), 5.53 (s, 1H), 5.27 (s, 1H), 5.09 (s, 1H), 4.96-4.86 (m, 1H), 4.78-4.62 (m, 1H), 4.42 (d, J=5.7 Hz, 2H), 4.26 (p, J=3.4 Hz, 1H), 3.91 (t, J=7.1 Hz, 2H), 3.32-3.02 (m, 2H), 2.90-2.66 (m, 4H), 2.61-2.50 (m, 2H), 2.50-2.37 (m, 1H), 2.37-2.16 (m, 2H), 2.16-2.05 (m, 1H), 2.02-1.89 (m, 2H), 1.89-1.70 (m, 5H), 1.69-1.60 (m, 1H), 1.55-1.40 (m, 1H), 1.36-1.19 (m, 1H), 1.07 (d, J=7.4 Hz, 3H), 0.91-0.85 (m, 12H), 0.06 (d, J=3.8 Hz, 6H).
In a manner similar to Step 4 of Example 51, 58, the titled compound (164.3 mg, 204.06 μmol, 37.03% yield, 94% purity, FA salt) was obtained as a yellow solid.
MS (M+H)+=757.2
1H NMR (400 MHz, Chloroform-d) δ 9.25 (s, 1H), 8.22 (s, 1H), 7.66 (s, 1H), 7.45 (t, J=7.8 Hz, 1H), 7.07 (d, J=7.1 Hz, 1H), 7.02-6.87 (m, 2H), 6.65 (s, 1H), 5.96 (d, J=9.6 Hz, 1H), 5.76 (dd, J=9.5, 5.9 Hz, 1H), 5.57-5.44 (m, 1H), 5.37-5.10 (m, 2H), 4.99-4.86 (m, 1H), 4.71-4.49 (m, 4H), 4.49-4.38 (m, 2H), 4.32-4.15 (m, 1H), 3.94 (t, J=7.0 Hz, 2H), 3.25-3.07 (m, 2H), 2.90-2.67 (m, 3H), 2.67-2.49 (m, 2H), 2.46-2.21 (m, 3H), 2.18-2.03 (m, 2H), 1.99-1.82 (m, 4H), 1.69-1.59 (m, 2H), 1.49-1.28 (m, 2H), 1.05 (d, J=7.3 Hz, 3H), 0.87 (d, J=6.9 Hz, 3H).
To a solution of tert-butyl N-[(4-hydroxyphenyl)methyl]carbamate (3 g, 13.44 mmol) in DMF (30 mL) was added K2CO3 (5.57 g, 40.31 mmol) and KI (2.23 g, 13.44 mmol) followed by benzyl N-(2-bromoethyl)carbamate (3.82 g, 14.78 mmol). The mixture was stirred under nitrogen at 60° C. for 16 hours. LCMS showed starting material was consumed completely and 60% of desired mass was detected. The reaction mixture was diluted with H2O (100 mL) and extracted with EtOAc (100 mL×3). The combined organic layers were washed with brine (200 mL×3), dried over Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 3/1). Compound (tert-butyl N-[[4-[2-(benzyloxycarbonylamino)ethoxy]phenyl]methyl]carbamate (4.58 g, 10.64 mmol, 79.16% yield, 93% purity) was obtained as a brown solid.
1H NMR (400 MHz, DMSO-d6) δ=7.36-7.29 (m, 5H), 7.14 (d, J=8.4 Hz, 2H), 6.86 (d, J=8.4 Hz, 2H), 5.03 (s, 2H), 4.08-4.01 (m, 2H), 3.96 (t, J=5.8 Hz, 2H), 3.36 (q, J=5.9 Hz, 2H), 2.89 (s, 1H), 2.73 (s, 1H), 1.38 (s, 9H).
To a solution of tert-butyl N-[[4-[2-(benzyloxycarbonylamino)ethoxy]phenyl]methyl]carbamate (4.58 g, 10.64 mmol) in MeOH (80 mL) was added Pd/C (0.8 g, 10.64 mmol, 10% purity). The mixture was stirred under H2 (15 psi) at 20° C. for 16 hours. LCMS showed starting material was consumed completely and 78% of desired mass was detected. The reaction mixture was filtered and concentrated under reduced pressure. Compound (tert-butyl N-[[4-(2-aminoethoxy)phenyl]methyl]carbamate (2.9 g, 8.49 mmol, 79.85% yield, 78% purity) was obtained as a colorless oil.
MS (M+H)+=267.3
In a manner similar to Step 1 of Example 2, the titled compound (1.78 g, 2.96 mmol, 34.89% yield, 87% purity) was obtained as a yellow solid.
LCMS: MS (M+H)+=523.2
In a manner similar to Step 2 of Example 2, the titled compound (2.4 g, crude, HCl salt) was obtained as a green solid.
MS (M+H)+=423.2
In a manner similar to Step 3 of Example 51, 58, the titled compound (620.5 mg, 681.55 μmol, 26.06% yield, 97% purity) was obtained as a yellow solid.
MS (M+H)+=883.3
1H NMR (400 MHz, Chloroform-d) δ 8.06 (s, 1H), 7.52 (dd, J=8.5, 7.1 Hz, 1H), 7.15 (dd, J=15.2, 7.6 Hz, 3H), 7.00 (d, J=8.5 Hz, 1H), 6.83 (d, J=8.3 Hz, 2H), 6.62-6.53 (m, 1H), 5.96 (d, J=9.6 Hz, 1H), 5.77 (t, J=8.0 Hz, 1H), 5.51 (s, 1H), 5.30-5.20 (m, 1H), 5.16 (t, J=6.0 Hz, 1H), 4.91 (dd, J=12.0, 5.3 Hz, 1H), 4.72-4.56 (m, 1H), 4.37-4.26 (m, 1H), 4.25-4.21 (m, 1H), 4.15 (t, J=5.3 Hz, 2H), 3.69 (q, J=5.6 Hz, 2H), 2.97-2.65 (m, 3H), 2.64-2.51 (m, 2H), 2.51-2.31 (m, 2H), 2.25 (d, J=12.2 Hz, 1H), 2.17-2.05 (m, 2H), 1.95-1.53 (m, 6H), 1.53-1.30 (m, 2H), 1.29-1.16 (m, 1H), 1.08 (d, J=7.4 Hz, 3H), 0.97-0.79 (m, 12H), 0.07 (s, 6H).
In a manner similar to Step 4 of Example 51, 58, the titled compound (103.5 mg, 130.58 μmol, 22.86% yield, 97% purity) was obtained as a yellow solid.
MS (M+H)+=769.2
1H NMR (400 MHz, CDCl3) δ=8.43 (s, 1H), 7.53 (t, J=7.8 Hz, 1H), 7.15 (dd, J1=17.4 Hz, J2=7.5 Hz, 3H), 7.00 (d, J=8.4 Hz, 1H), 6.85 (d, J=7.9 Hz, 2H), 6.57 (t, J=5.7 Hz, 1H), 5.97 (d, J=9.7 Hz, 1H), 5.85-5.64 (m, 1H), 5.52 (s, 1H), 5.24 (s, 2H), 4.92 (dd, J1=11.6 Hz, J2=5.1 Hz, 1H), 4.69-4.46 (m, 1H), 4.37 (dd, J1=14.5 Hz, J2=5.5 Hz, 1H), 4.27-4.03 (m, 4H), 3.81-3.49 (m, 2H), 2.90-2.71 (m, 3H), 2.68-2.52 (m, 2H), 2.50-2.29 (m, 2H), 2.27-2.05 (m, 3H), 1.78 (s, 7H), 1.42-1.19 (m, 2H), 1.09 (d, J=7.3 Hz, 3H), 0.95-0.77 (m, 3H).
KOH (13.87 g, 247 mmol) was dissolved in water (10 mL), and methanol (60 mL) was slowly added dropwise while stirring at 0° C. while maintaining an internal temperature of 20° C. After the dropwise addition was completed, lovastatin (10.00 g, 24.72 mmol) was added, and the resulting mixture was stirred at 100° C. for 8 h. TLC (EA 100%) shows starting material was consumed. The solvent of the mixture was concentrated under reduced pressure, and 1N HCl was slowly added dropwise to the residue to adjust the pH to 5-6. The reaction mixture was extracted with EtOAc (100 mL) and concentrated under reduced pressure. The residue was vacuum-dried to give the title compound (10.68 g, crude) as a black oil.
MS (M+K)+=378.3
To a solution of (3R,5R)-3,5-dihydroxy-7-((1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)heptanoic acid (10.68 g, crude) and K2CO3 (15.37 g, 111.23 mmol) in DMF (100 mL) was added PMBCl (103.82 mmol, 14.02 mL), and the mixture was stirred at 25° C. for 18 hours. LCMS showed a main peak of the desired mass. Water (50 mL) was added to the mixture, extracted with EtOAc (100 mL×3), and the organic phase was washed with brine (50 mL×2) and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (Hex:EtOAc=1:1) to afford the title compound (5.89 g, 12.84 mmol, 52% yield) as a clear oil.
MS (M+Na)+=481.3
To a solution of 4-methoxybenzyl (3R,5R)-3,5-dihydroxy-7-((1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)heptanoate (5.85 g, 12.76 mmol) and imidazole (3.47 g, 51.02 mmol) in DMF/THF (1:1) (82 mL) was added TBDMSCl (44.65 mmol, 7.73 mL) and the resulting mixture was stirred at 25° C. for 18 hours. LCMS showed a main peak of the desired mass. The reaction mixture was concentrated under reduced pressure, water (50 mL) was poured into the residue, extracted with EtOAc (100 mL×3), dried over Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (Hex:EtOAc=95:5 to 9:1) to afford the title compound (8.45 g, 12.30 mmol, 96% yield) as a white solid.
MS (M+Na)+=710.3
To a mixture of 4-methoxybenzyl(3R,5R)-3,5-bis((tert-butyldimethylsilyl)oxy)-7-((1S,2S,6R,8S,8aR)-8-hydroxy-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)heptanoate (8.40 g, 12.22 mmol) and DMAP (9.11 g, 74.57 mmol) was added (4-nitrophenyl)carbonochloridate (14.78 g, 73.35 mmol), and the resulting mixture was stirred at 25° C. for 16 hours. LCMS showed a peak of the desired mass and the starting material was consumed. Water (100 mL) was poured into the mixture, extracted with EtOAc (100 mL×3), and the organic phase was washed with 1N HCl (50 mL×3) and brine (50 mL), and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (Hex: EtOAc=9:1 to 4:1) to afford the title compound (8.65 g, crude, 78% purity) as a yellow oil.
MS (M+H)+=852.2
To a solution of 2-(2,6-dioxo-3-piperidyl)-4-fluoro-isoindoline-1,3-dione (1.67 g, 6.04 mmol, 1 eq) and tert-butyl (2-(2-(2-aminoethoxy)ethoxy)ethyl)carbamate (1.50 g, 6.04 mmol) in DMF (15 mL) was added DIEA (12.08 mmol, 1.72 mL), and the mixture was stirred at 90° C. for 12 hours. LCMS showed a main peak of the desired mass. Water (40 mL) was poured into the mixture, extracted with EtOAc (40 mL×3), and the organic phase was washed with 1N HCl (20 mL×3), brine (20 mL×2), and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (Hex:EtOAc=1:1 to 1:3) to afford the title compound (0.79 g, 1.57 mmol, 26% yield) as a green oil.
MS (M+Na)+=527.2
To a solution of tert-butyl (2-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl))amino)ethoxy)ethoxy)ethyl)carbamate (0.75 g, 1.49 mmol) in DCM (3.5 mL) was added HCl/dioxane (4 M, 0.743 mL), and the resulting mixture was stirred at 25° C. for 4 hours. LCMS showed a main peak of the desired mass. The reaction mixture was concentrated in vacuo to afford the title compound (0.530 g, crude, HCl salt) as a yellow solid.
MS (M+H)+=405.2
To a solution of 4-((2-(2-(2-(2-aminoethoxy)ethoxy)ethyl)amino)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (10a) (534 mg, 1.32 mmol, HCl salt) and (4-methoxybenzyl (3R,5R)-3,5-bis((tert-butyldimethylsilyl)oxy)-7-((1S,2S,6R,8S,8aR)-2,6-dimethyl-8-((4-nitrophenoxy)carbonyl)oxy)-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)heptanoate (900 mg, 1.06 mmol) in DMAC (10.8 mL) was added TEA (4.22 mmol, 590 μL), and the resulting mixture was stirred at 25° C. for 16 hours. LCMS showed a peak of the desired mass.
The reaction mixture was quenched by adding H2O (10 mL) and extracted with EtOAc (20 mL×3). The organic layer was washed with brine (sat.aq, 10 mL×2), dried over Na2SO4, and filtered. The residue was purified by silica gel column chromatography (Hex:EtOAc=1:9 to 1:1) to afford the title compound (899 mg, 804 μmol, 76% yield) as a yellow solid.
MS (M)+=1117.5
1H NMR (600 MHz, DMSO-d6) δ 11.10 (s, 1H), 7.58 (t, J=7.7 Hz, 1H), 7.30-7.25 (m, 2H), 7.13 (d, J=8.6 Hz, 1H), 7.04 (dd, J=7.0, 1.5 Hz, 1H), 6.97-6.89 (m, 3H), 6.60 (t, J=5.8 Hz, 1H), 5.90 (d, J=9.5 Hz, 1H), 5.78-5.73 (m, 1H), 5.44 (s, 1H), 5.08-5.03 (m, 1H), 5.02-4.94 (m, 3H), 4.13 (t, J=6.3 Hz, 1H), 3.77-3.72 (m, 3H), 3.69-3.56 (m, 4H), 3.54-3.43 (m, 6H), 3.36 (t, J=6.5 Hz, 2H), 3.19 (dd, J=13.4, 6.7 Hz, 1H), 3.00-2.96 (m, 1H), 2.88 (t, J=12.8 Hz, 1H), 2.60-2.53 (m, 2H), 2.38-2.32 (m, 2H), 2.29-2.25 (m, 1H), 2.17 (d, J=12.2 Hz, 1H), 2.04-2.00 (m, 1H), 1.89-1.79 (m, 2H), 1.65-1.50 (m, 4H), 1.41 (s, 2H), 1.19-1.15 (m, 1H), 1.09 (d, J=10.0 Hz, 1H), 1.01 (d, J=7.4 Hz, 3H), 0.92-0.68 (m, 21H), 0.07-−0.09 (m, 12H).
To a solution of 4-methoxybenzyl(3R,5R)-3,5-bis((tert-butyldimethylsilyl)oxy)-7-((1S,2S,6R,8S,8aR)-8-((2-(2-(2-(2-(2-(2-(2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)oxy)ethyl)carbamoyl)oxy)-2,6-dimethyl-1,2,6,7,8,8a-hexahydronaphthalen-1-yl)heptanoate (350 mg, 313 μmol) was added TBAF (1 M, 6.26 mL) in one portion at room temperature and the resulting mixture was stirred for 18 h. LCMS showed complete consumption of starting material and the desired mass was detected. The reaction mixture was quenched with H2O (5 mL) and extracted with EtOAc (5 mL×3). The organic layer was dried over Na2SO4, filtered and concentrated. The residue was purified by silica gel column chromatography (Hex: EtOAc=0:100, MC: MeOH=9:1) to afford the title compound (235 mg, 306 μmol, 98% yield, 96% purity) was obtained as a yellow solid.
MS (M+Na)+=791.4
1H NMR (600 MHz, DMSO-d6) δ 11.06 (s, 1H), 7.59-7.53 (m, 1H), 7.11 (d, J=8.6 Hz, 1H), 7.01 (d, J=7.0 Hz, 1H), 6.92 (t, J=5.8 Hz, 1H), 6.57 (d, J=6.0 Hz, 1H), 5.86 (d, J=9.5 Hz, 1H), 5.76-5.69 (m, 1H), 5.40 (s, 1H), 5.06-4.94 (m, 2H), 4.49-4.35 (m, 2H), 3.98-3.90 (m, 1H), 3.62-3.33 (m, 10H), 3.15-3.03 (m, 3H), 2.88-2.82 (m, 1H), 2.61-2.50 (m, 3H), 2.39-2.25 (m, 3H), 2.15 (d, J=12.3 Hz, 1H), 2.02-1.95 (m, 1H), 1.86-1.74 (m, 2H), 1.65-1.49 (m, 3H), 1.46-1.36 (m, 2H), 1.32-1.25 (m, 2H), 0.99 (d, J=7.1 Hz, 3H), 0.79 (d, J=6.7 Hz, 3H).
In a manner similar to Step 7 of Example 106, the titled compound (207 mg, 178 μmol, 51% yield) was obtained as a yellow solid.
MS (M)+=1161.6
1H NMR (600 MHz, DMSO-d6) δ 11.07 (s, 1H), 7.58-7.54 (m, 1H), 7.26 (dt, J=8.8, 2.5 Hz, 2H), 7.12 (d, J=8.6 Hz, 1H), 7.02 (dd, J=7.0, 1.6 Hz, 1H), 6.93-6.87 (m, 3H), 6.58 (t, J=5.9 Hz, 1H), 5.88 (d, J=9.6 Hz, 1H), 5.74 (dd, J=9.6, 6.0 Hz, 1H), 5.42 (s, 1H), 5.04 (dd, J=12.9, 5.5 Hz, 1H), 4.99-4.95 (m, 2H), 4.13-4.09 (m, 1H), 3.72 (d, J=1.5 Hz, 3H), 3.65-3.57 (m, 4H), 3.53-3.48 (m, 4H), 3.46-3.43 (m, 4H), 3.37-3.32 (m, 4H), 3.18-3.13 (m, 1H), 2.97-2.92 (m, 1H), 2.86 (t, J=12.8 Hz, 1H), 2.53 (d, J=14.8 Hz, 2H), 2.33 (dd, J=14.8, 7.5 Hz, 2H), 2.26 (d, J=6.8 Hz, 1H), 2.15 (d, J=12.4 Hz, 1H), 2.03-1.98 (m, 1H), 1.86-1.78 (m, 2H), 1.60-1.48 (m, 4H), 1.39 (d, J=7.0 Hz, 2H), 1.16 (td, J=6.9, 1.8 Hz, 1H), 1.08 (t, J=10.2 Hz, 1H), 1.00 (d, J=7.3 Hz, 3H), 0.80 (dd, J=19.5, 1.8 Hz, 21H), 0.01-0.07 (m, 12H).
In a manner similar to Step 8 of Example 106, the titled compound (20 mg, 24.6 μmol, 8% yield, 91% purity) was obtained as a yellow solid.
MS (M+Na)+=835.4
1H NMR (600 MHz, DMSO-d6) δ 11.08 (s, 2H), 7.60-7.56 (m, 1H), 7.14 (d, J=8.6 Hz, 1H), 7.04 (d, J=7.0 Hz, 1H), 6.94 (t, J=5.8 Hz, 1H), 6.60 (t, J=5.9 Hz, 1H), 5.89 (d, J=9.6 Hz, 1H), 5.77-5.73 (m, 1H), 5.43 (s, 1H), 5.08-5.01 (m, 2H), 4.59-4.41 (m, 2H), 3.97-3.90 (m, 1H), 3.61 (t, J=5.5 Hz, 2H), 3.56-3.44 (m, 10H), 3.18-3.14 (m, 1H), 3.08 (dq, J=13.5, 6.8 Hz, 2H), 2.88 (ddd, J=17.1, 13.9, 5.4 Hz, 1H), 2.64-2.53 (m, 3H), 2.35-2.25 (m, 3H), 2.21-2.16 (m, 1H), 2.04-2.00 (m, 1H), 1.87-1.78 (m, 2H), 1.67-1.53 (m, 3H), 1.44-1.38 (m, 2H), 1.28-1.21 (m, 2H), 1.01 (d, J=7.4 Hz, 3H), 0.82 (d, J=6.9 Hz, 3H).
To a mixture of 4-bromo-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (2 g, 5.93 mmol) and benzyl (2-(2-(prop-2-yn-1-yloxy)ethoxy)ethyl)carbamate (1.81 g, 6.53 mmol) in DMF (15 mL) were added Pd(PPh3)2Cl2 (416.40 mg, 593.25 μmol), CuI (225.97 mg, 1.19 mmol) and TEA (6.00 g, 59.33 mmol, 8.26 mL) in one portion at 15° C. under N2 and the resulting mixture was stirred at 80° C. for 16 h. LCMS showed 4-bromo-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione was consumed completely and one peak with desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=1:1) indicated 4-bromo-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione was consumed completely and four new spots were detected. The reaction mixture was diluted with H2O (50 mL) and extracted with EtOAc (50 mL×3). The organic layer was washed with brine (50 mL×3), dried over Na2SO4, filtered and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=3/1 to 1/2) to afford the titled compound (761 mg, 1.07 mmol, 18.03% yield, 75% purity) as a yellow oil. MS (M+H)+=534.2
To a mixture of benzyl (2-(2-((3-(2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl) prop-2-yn-1-yl)oxy)ethoxy)ethyl)carbamate (400 mg, 562.29 μmol) in ACN (4 mL) was added TMSI (247.52 mg, 1.24 mmol, 168.38 μL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 2 h. LCMS showed starting material remained and one peak with desired mass was detected and the mixture was stirred at 15° C. for 2 h. LCMS showed starting material was consumed completely and one peak with desired mass was detected. The reaction mixture was combined with other batches (0.3 g scale) for work-up. The reaction mixture was concentrated in vacuum. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 1%-30%, 11 min) and then lyophilized to afford the titled compound (267 mg, 409.77 μmol, 72.87% yield, 98% purity) as a white solid. MS (M+H)+=400.1
To a mixture of 4-(3-(2-(2-aminoethoxy)ethoxy) prop-1-yn-1-yl)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (167 mg, 418.13 μmol) in DMAC (4 mL) were added TEA (84.62 mg, 836.26 μmol, 116.40 μL) and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (250.79 mg, 418.13 μmol) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed all starting material was consumed completely and one peak with desired mass was detected. The reaction mixture was diluted with H2O (12 mL) and extracted with EtOAc (12 mL×3). The organic layer was washed with brine (12 mL×3), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 68%-98%, 11 min) and then lyophilized to afford the titled compound (96.2 mg, 109.61 mol, 26.22% yield, 98% purity) as a white solid. MS (M+H)+=860.5
1H NMR (400 MHz, CDCl3) δ=8.89-8.44 (m, 1H), 7.83 (dd, J=0.8, 7.2 Hz, 1H), 7.78-7.66 (m, 2H), 5.96 (d, J=9.7 Hz, 1H), 5.76 (dd, J=6.1, 9.4 Hz, 1H), 5.50 (br s, 1H), 5.32-5.14 (m, 2H), 5.01-4.96 (m, 1H), 4.69-4.57 (m, 1H), 4.49 (s, 2H), 4.32-4.23 (m, 1H), 3.91-3.76 (m, 2H), 3.74-3.66 (m, 2H), 3.61-3.49 (m, 2H), 3.47-3.36 (m, 1H), 3.35-3.26 (m, 1H), 2.93-2.71 (m, 3H), 2.64-2.49 (m, 2H), 2.45-2.30 (m, 2H), 2.27-2.20 (m, 1H), 2.17-2.04 (m, 2H), 1.90-1.63 (m, 6H), 1.48-1.27 (m, 2H), 1.06 (d, J=7.5 Hz, 3H), 0.88 (m, 12H), 0.07 (s, 6H)
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl) oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-((3-(2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)prop-2-yn-1-yl)oxy)ethoxy)ethyl)carbamate (182 mg, 211.61 μmol) in THE (3 mL) were added AcOH (63.54 mg, 1.06 mmol, 60.51 μL) and TBAF (1 M, 846.44 μL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and desired mass was detected. The reaction mixture was quenched with saturated NH4Cl (10 mL) and extracted with EtOAc (10 mL×3). The organic layer was washed with saturated NH4Cl (10 mL×3), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Unisil 3-100 C18 μLtra 150*50 mm*3 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 43%-63%, 10 min) and then lyophilized to afford the titled compound (51.3 mg, 62.59 μmol, 29.58% yield, 91% purity) as a white solid. MS (M+H)+=746.5
1H NMR (400 MHz, CDCl3) δ=8.95-8.66 (m, 1H), 7.88-7.82 (m, 1H), 7.78-7.69 (m, 2H), 5.98 (d, J=9.6 Hz, 1H), 5.83-5.74 (m, 1H), 5.52 (s, 1H), 5.36-5.15 (m, 2H), 5.08-4.94 (m, 1H), 4.68-4.45 (m, 3H), 4.37-4.21 (m, 1H), 3.94-3.78 (m, 2H), 3.75-3.66 (m, 2H), 3.65-3.48 (m, 2H), 3.46-3.25 (m, 2H), 3.00-2.48 (m, 7H), 2.46-2.32 (m, 2H), 2.23-2.26 (m, 1H), 2.21-2.13 (m, 1H), 2.12-2.04 (m, 1H), 2.03-1.94 (m, 1H), 1.92-1.81 (m, 2H), 1.78-1.67 (m, 2H), 1.44-1.31 (m, 2H), 1.12-1.06 (m, 3H), 0.93-0.87 (m, 3H)
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (156 mg, 177.12 μmol, 20.95% yield, 98% purity) as a yellow solid. MS (M+H)+=863.7
1H NMR (400 MHz, CDCl3) δ=8.09-7.97 (m, 1H), 7.54-7.46 (m, 1H), 7.10 (d, J=7.0 Hz, 1H), 6.90 (d, J=8.5 Hz, 1H), 6.32-6.22 (m, 1H), 5.97 (d, J=9.6 Hz, 1H), 5.76 (dd, J=6.1, 9.4 Hz, 1H), 5.51 (br s, 1H), 5.25-5.05 (m, 2H), 4.98-4.87 (m, 1H), 4.70-4.60 (m, 1H), 4.27-4.30 (m, 1H), 3.51-3.42 (m, 4H), 3.38-3.16 (m, 4H), 2.93-2.69 (m, 3H), 2.65-2.50 (m, 2H), 2.48-2.31 (m, 2H), 2.29-2.21 (m, 1H), 2.18-2.05 (m, 2H), 1.91-1.62 (m, 12H), 1.53-1.13 (m, 3H), 1.08 (d, J=7.4 Hz, 3H), 0.88 (m, 12H), 0.07 (s, 6H)
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl) oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl(3-(4-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)butoxy)propyl)carbamate (100 mg, 115.86 μmol) in THF (2 mL) were was added AcOH (34.79 mg, 579.29 μmol, 33.13 μL) and TBAF (1 M, 463.44 μL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and one peak with desired mass was detected. The reaction mixture was quenched with saturated NH4Cl (10 mL) and extracted with EtOAc (10 mL×3). The organic layer was washed with saturated NH4Cl (10 mL×3), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex Luna C18 150*25 mm*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 46%-76%, 10 min) to afford the titled compound (81.2 mg, 103.01 μmol, 88.91% yield, 95% purity) as a yellow solid. MS (M+H)+=749.5
1H NMR (400 MHz, CDCl3) δ=8.42-8.20 (m, 1H), 7.54-7.47 (m, 1H), 7.10 (d, J=7.1 Hz, 1H), 6.90 (d, J=8.6 Hz, 1H), 6.41-6.21 (m, 1H), 5.96 (d, J=9.6 Hz, 1H), 5.81-5.71 (m, 1H), 5.54-5.47 (m, 1H), 5.37-5.17 (m, 1H), 5.15-5.01 (m, 1H), 4.98-4.88 (m, 1H), 4.69-4.57 (m, 1H), 4.36-4.25 (m, 1H), 3.52-3.42 (m, 4H), 3.36-3.20 (m, 4H), 2.93-2.67 (m, 4H), 2.62-2.54 (m, 1H), 2.48-2.31 (m, 2H), 2.29-2.21 (m, 1H), 2.18-2.11 (m, 1H), 2.10-2.02 (m, 1H), 2.00-1.92 (m, 1H), 1.91-1.81 (m, 2H), 1.78-1.62 (m, 10H), 1.40-1.33 (m, 2H), 1.08 (d, J=7.4 Hz, 3H), 0.89 (d, J=7.0 Hz, 3H)
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (1.02 g, 1.02 mmol, 34.72% yield, 90% purity) as a yellow solid. MS (M+H)+=902.7.
1H NMR (400 MHz, CDCl3) δ=8.46 (s, 1H), 7.50-7.47 (m, 1H), 7.10 (d, J=7.0 Hz, 1H), 6.88 (d, J=8.5 Hz, 1H), 6.25 (d, J=7.8 Hz, 1H), 5.98 (d, J=9.7 9.6 Hz, 1H), 5.78 (dd, J 1=9.5 Hz, J2=6.1 Hz, 1H), 5.53 (s, 1H), 5.17 (s, 1H), 5.06-4.76 (m, 2H), 4.66-4.65 (m, 1H), 4.34-4.26 (m, 1H), 3.70-3.49 (m, 2H), 3.30-3.15 (m, 1H), 3.05-2.95 (m, 3H), 2.93-2.84 (m, 1H), 2.83-2.66 (m, 2H), 2.64-2.54 (m, 2H), 2.54-2.31 (m, 6H), 2.29-2.21 (m, 1H), 2.20-2.00 (m, 4H), 1.91-1.80 (m, 3H), 1.76-1.61 (m, 5H), 1.58-1.43 (m, 4H), 1.32 (m, 3H), 1.08 (d, J=7.3 Hz, 3H), 0.93-0.85 (m, 12H), 0.08 (s, 6H).
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (140.5 mg, 167.61 μmol, 21.60% yield, 94% purity) as a yellow solid. MS (M+H)+=788.6.
1H NMR (400 MHz, CDCl3) δ=8.52 (s, 1H), 7.50 (t, J=7.8 Hz, 1H), 7.12 (d, J=7.1 Hz, 1H), 6.89 (d, J=8.7 Hz, 1H), 6.26 (d, J=7.2 Hz, 1H), 5.98 (d, J=9.7 Hz, 1H), 5.80-5.76 (m, 1H), 5.52 (s, 1H), 5.20 (s, 1H), 4.64 (br s, 2H), 4.64 (s, 1H), 4.38-4.30 (m, 1H), 3.77-3.55 (m, 2H), 3.42-3.21 (m, 1H), 3.15-3.02 (m, 2H), 2.96-2.74 (m, 3H), 2.73-2.46 (m, 6H), 2.45-2.33 (m, 2H), 2.29-2.04 (m, 5H), 1.99-1.77 (m, 5H), 1.76-1.58 (m, 5H), 1.55-1.27 (m, 7H), 1.07 (d, J=7.5 Hz, 3H), 0.90 (d, J=7.0 Hz, 3H).
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (527.6 mg, 541.29 μmol, 37.51% yield, 94% purity) as a yellow solid. MS (M+H)+=916.7.
1H NMR (400 MHz, CDCl3) δ=8.44 (s, 1H), 7.49 (t, J=7.8 Hz, 1H), 7.12 (d, J=7.1 Hz, 1H), 6.88 (d, J=8.6 Hz, 1H), 6.28 (d, J=7.6 Hz, 1H), 5.97 (d, J=9.6 Hz, 1H), 5.78 (dd, J 1=9.5 Hz, J2=6.0 Hz, 1H), 5.52 (s, 1H), 5.17 (s, 1H), 4.99-4.84 (m, 2H), 4.83-4.61 (m, 1H), 4.30-4.28 (m, 1H), 3.68-3.59 (m, 1H), 3.27-3.17 (m, 1H), 3.17-3.00 (m, 3H), 2.93-2.85 (m, 1H), 2.83-2.73 (m, 2H), 2.72-2.49 (m, 6H), 2.46-2.33 (m, 2H), 2.29-2.16 (m, 3H), 2.16-2.06 (m, 2H), 1.94-1.73 (m, 6H), 1.71-1.59 (m, 4H), 1.51-1.41 (m, 3H), 1.36-1.24 (m, 5H), 1.08 (d, J=7.4 Hz, 3H), 0.95-0.83 (m, 12H), 0.08 (s, 6H).
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (39.5 mg, 44.33 μmol, 11.60% yield, 90% purity) as a yellow solid. MS (M+H)+=802.6.
1H NMR (400 MHz, CDCl3) δ=7.49 (t, J=7.6 Hz, 1H), 7.11 (d, J=7.1 Hz, 1H), 6.89 (d, J=8.5 Hz, 1H), 6.27 (d, J=7.6 Hz, 1H), 5.98 (d, J=9.5 Hz, 1H), 5.79 (dd, J=6.0, 9.6 Hz, 1H), 5.53 (s, 1H), 5.23 (s, 1H), 4.92 (dd, J=5.2, 12.0 Hz, 1H), 4.79-4.56 (m, 2H), 4.32-4.31 (m, 1H), 3.58-3.45 (m, 1H), 3.36-3.19 (m, 1H), 3.15-3.00 (m, 1H), 2.94-2.83 (m, 3H), 2.81-2.69 (m, 3H), 2.65-2.58 (m, 1H), 2.47-2.41 (m, 1H), 2.41-2.32 (m, 3H), 2.30-2.19 (m, 3H), 2.16-2.12 (m, 1H), 2.11-2.03 (m, 3H), 1.96-1.82 (m, 5H), 1.78-1.71 (m, 5H), 1.53-1.44 (m, 5H), 1.41-1.26 (m, 5H), 1.08 (d, J=7.3 Hz, 3H), 0.91 (d, J=7.0 Hz, 3H).
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (491.7 mg, 542.56 μmol, 24.68% yield, 97% purity) as a off-white solid. MS (M+H)+=879.5.
1H NMR (400 MHz, CDCl3) δ=8.84-8.35 (m, 1H), 7.90-7.61 (m, 2H), 7.55 (d, J=7.3 Hz, 1H), 7.18 (d, J=8.4 Hz, 1H), 6.03-5.82 (m, 1H), 5.81-5.66 (m, 1H), 5.62-5.25 (m, 2H), 5.23-5.12 (m, 1H), 5.02 (d, J=4.6 Hz, 1H), 4.76-4.52 (m, 3H), 4.28 (d, J=2.8 Hz, 1H), 3.68-3.24 (m, 8H), 3.02-2.67 (m, 3H), 2.66-2.49 (m, 2H), 2.46-2.14 (m, 4H), 2.08 (m, 1H), 1.90-1.62 (m, 6H), 1.51-1.39 (m, 1H), 1.36-1.24 (m, 1H), 1.12-0.96 (m, 3H), 0.89-0.76 (m, 12H), 0.07 (s, 6H).
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (104 mg, 130.54 μmol, 32.79% yield, 96% purity) as a off-white solid. MS (M+H)+=765.2.
1H NMR (400 MHz, DMSO-d6) δ 11.12 (s, 1H), 8.02 (t, J=5.6 Hz, 1H), 7.82 (dd, J=8.5, 7.3 Hz, 1H), 7.50 (d, J=7.3 Hz, 1H), 7.40 (d, J=8.5 Hz, 1H), 7.04-6.95 (m, 1H), 5.89 (d, J=9.6 Hz, 1H), 5.45 (s, 1H), 5.19 (d, J=3.2 Hz, 1H), 5.17-5.08 (m, 1H), 5.04 (d, J=3.3 Hz, 1H), 4.79 (s, 2H), 4.55-4.44 (m, 1H), 4.15-4.04 (m, 1H), 3.50-3.41 (m, 2H), 3.41-3.36 (m, 2H), 3.33-3.26 (m, 3H), 3.22-3.06 (m, 2H), 2.98-2.82 (m, 1H), 2.72-2.55 (m, 2H), 2.44-2.27 (m, 3H), 2.23 (d, J=12.2 Hz, 1H), 2.11-1.96 (m, 1H), 1.94-1.75 (m, 3H), 1.75-1.55 (m, 3H), 1.55-1.40 (m, 1H), 1.37-1.17 (m, 2H), 1.03 (d, J=7.3 Hz, 3H), 0.84 (d, J=6.9 Hz, 3H).
To a mixture of 1-benzylpiperidin-4-ol (10 g, 52.28 mmol) and prop-2-enenitrile (13.25 g, 249.71 mmol, 16.56 mL) was added NaH (100 mg, 2.50 mmol, 60% purity) in one portion at 0° C. and the resulting mixture was stirred at 15° C. for 16 h. TLC (SiO2, Ethyl acetate: Methanol=10:1) indicated 1-benzylpiperidin-4-ol was consumed completely and one new spot was detected. The reaction mixture was diluted with i-PrOH (400 mL) and filtered. The filtrate was concentrated to afford the titled compound (11.1 g, 45.43 mmol, 86.89% yield) as a yellow oil.
1H NMR (400 MHz, CDCl3) δ=7.33-7.23 (m, 5H), 3.70-3.60 (m, 2H), 3.52-3.47 (m, 2H), 3.45-3.35 (m, 1H), 2.80-2.66 (m, 2H), 2.61-2.51 (m, 2H), 2.24-2.08 (m, 2H), 1.92-1.82 (m, 2H), 1.70-1.52 (m, 2H)
To a solution of 3-((1-benzylpiperidin-4-yl)oxy)propanenitrile (11 g, 45.02 mmol) in MeOH (100 mL) was added Raney-Ni (7.71 g, 90.04 mmol) under N2. The suspension was degassed under vacuum and purged with H2 several times. The mixture was stirred under H2 (50 psi) at 25° C. for 16 h. TLC (SiO2, Ethyl acetate:Methanol=8:1) indicated starting material was consumed completely and one new spot was detected. The reaction mixture was diluted with MeOH (150 mL) and filtered. The filtrate was concentrated in vacuum to afford the titled compound (9.3 g, 37.45 mmol, 83.17% yield) as a yellow oil.
To a solution of 3-((1-benzylpiperidin-4-yl) oxy) propan-1-amine (5 g, 20.13 mmol) in DCM (50 mL) was added TEA (6.11 g, 60.40 mmol, 8.41 mL), then a solution of (Boc)2O (4.83 g, 22.15 mmol, 5.09 mL) in DCM (50 mL) was added drop-wise at 0° C. and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed starting material was consumed completely and one peak with desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=1:1) indicated starting material was consumed completely and two new spots were detected. The reaction mixture was concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/1) to afford the titled compound (3.4 g, 9.76 mmol, 48.46% yield) as a yellow oil. MS (M+H)+=349.4
To a solution of tert-butyl (3-((1-benzylpiperidin-4-yl)oxy)propyl)carbamate (3.4 g, 9.76 mmol) in MeOH (34 mL) was added Pd/C (340 mg, 975.67 μmol, 10% purity) under N2. The suspension was degassed under vacuum and purged with H2 several times. The mixture was stirred under H2 (15 psi) at 15° C. for 16 h. TLC (SiO2, Petroleum ether:Ethyl acetate=1:1) indicated starting material was consumed completely and one new spot was detected. The reaction mixture was filtered. The filtrate was concentrated in vacuum to afford the titled compound (2.7 g, crude) as a yellow oil.
1H NMR (400 MHz, CDCl3) δ=4.96 (br s, 1H), 3.51 (t, J=6.0 Hz, 2H), 3.39-3.31 (m, 1H), 3.25-3.18 (m, 2H), 3.07 (td, J=4.6, 12.7 Hz, 2H), 2.69-2.53 (m, 2H), 1.97-1.86 (m, 2H), 1.77-1.70 (m, 2H), 1.50-1.44 (m, 2H), 1.43 (s, 9H)
To a mixture of 2-[2-(2,6-dioxo-3-piperidyl)-1,3-dioxo-isoindolin-4-yl]oxyacetic acid (700 mg, 2.11 mmol) and tert-butyl (3-(piperidin-4-yloxy)propyl)carbamate (598.72 mg, 2.32 mmol) in DMF (7 mL) were added HATU (881.16 mg, 2.32 mmol) and DIPEA (816.85 mg, 6.32 mmol, 1.10 mL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 2 h. LCMS showed all starting material was consumed completely and one peak with desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=0:1) indicated all starting material was consumed completely and three new spots were detected. The reaction mixture was diluted with H2O (30 mL) and extracted with EtOAc (30 mL×3). The organic layer was washed with brine (30 mL×3), dried over Na2SO4, filtered and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=3/1 to 0/1) to afford the titled compound (860 mg, 1.35 mmol, 64.16% yield, 90% purity) as a off-white solid. MS (M−100+H)+=473.3
To a mixture of tert-butyl (3-((1-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy) acetyl)piperidin-4-yl)oxy)propyl)carbamate (860 mg, 1.50 mmol) in dioxane (8 mL) was added HCl/dioxane (4 M, 16 mL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 2 h. LCMS showed starting material was consumed completely and one peak with desired mass was detected. The reaction mixture was concentrated in vacuum to afford the titled compound (770 mg, crude, HCl) as an off-white solid. MS (M+H)+=473.3
To a mixture of 4-(2-(4-(3-aminopropoxy)piperidin-1-yl)-2-oxoethoxy)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (770 mg, 1.51 mmol, HCl) in DMAc (10 mL) were added TEA (459.28 mg, 4.54 mmol) and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (907.42 mg, 1.51 mmol) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 32 h. LCMS showed a little of 4-(2-(4-(3-aminopropoxy)piperidin-1-yl)-2-oxoethoxy)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione remained and one peak with desired mass was detected. The reaction mixture was diluted with H2O (30 mL) and extracted with EtOAc (30 mL×3). The organic layer was washed with brine (30 mL×3), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 67%-97%, 11 min) and then lyophilized to afford the titled compound (623 mg, 640.91 μmol, 42.36% yield, 96% purity) as a white solid. MS (M+H)+=933.6
1H NMR (400 MHz, CDCl3) δ=8.35-7.99 (m, 1H), 7.72-7.65 (m, 1H), 7.52 (d, J=7.4 Hz, 1H), 7.41-7.29 (m, 1H), 5.98 (d, J=9.8 Hz, 1H), 5.81-5.74 (m, 1H), 5.51 (s, 1H), 5.18-5.12 (m, 1H), 4.99-4.93 (m, 2H), 4.75-4.59 (m, 1H), 4.35-4.25 (m, 1H), 3.79-3.70 (m, 1H), 3.53-3.28 (m, 5H), 3.23-3.16 (m, 1H), 2.93-2.70 (m, 3H), 2.63-2.50 (m, 2H), 2.46-2.31 (m, 2H), 2.25 (d, J=10.4 Hz, 1H), 2.19-2.06 (m, 2H), 1.93-1.51 (m, 16H), 1.49-1.40 (m, 1H), 1.36-1.26 (m, 1H), 1.07 (d, J=7.4 Hz, 3H), 0.88 (m, 12H), 0.07 (s, 6H)
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (3-((1-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetyl)piperidin-4-yl)oxy)propyl)carbamate (589 mg, 631.18 μmol) in THF (8 mL) were added AcOH (189.52 mg, 3.16 mmol, 180.49 μL) and TBAF (1 M, 2.52 mL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 32 h. LCMS showed starting material was consumed completely and one peak with desired mass was detected. The reaction mixture was quenched with saturated NH4Cl (30 mL) and extracted with EtOAc (30 mL×3). The organic layer was dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex Luna C18 150*25 mm*10 μm; mobile phase: [water (0.225% F A)-ACN]; B %: 38%-68%, 11 min) and re-purified by prep-TLC (SiO2, Ethyl acetate:Methanol=10:1) to afford the titled compound (95.2 mg, 109.28 μmol, 17.31% yield, 94% purity) as a white solid. MS (M+H)+=819.5
1H NMR (400 MHz, CD3OD) δ=7.75 (dd, J=7.5, 8.4 Hz, 1H), 7.49 (d, J=7.2 Hz, 1H), 7.35 (d, J=8.6 Hz, 1H), 5.93 (d, J=9.9 Hz, 1H), 5.82-5.68 (m, 1H), 5.48 (br s, 1H), 5.20-5.07 (m, 4H), 4.73-4.62 (m, 1H), 4.30-4.19 (m, 1H), 3.88-3.66 (m, 2H), 3.66-3.49 (m, 3H), 3.49-3.38 (m, 2H), 3.27-3.10 (m, 2H), 2.94-2.81 (m, 1H), 2.79-2.65 (m, 3H), 2.57-2.48 (m, 1H), 2.46-2.35 (m, 2H), 2.34-2.26 (m, 1H), 2.18-2.09 (m, 1H), 2.02-1.86 (m, 4H), 1.85-1.69 (m, 6H), 1.68-1.53 (m, 3H), 1.51-1.36 (m, 2H), 1.10 (d, J=7.5 Hz, 3H), 0.91 (d, J=7.0 Hz, 3H)
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (838.2 mg, 898.92 μmol, 53.39% yield, 99% purity) as a yellow solid. MS (M+H)+=923.6
1H NMR (400 MHz, CDCl3) δ=8.75-8.54 (m, 1H), 7.78-7.71 (m, 1H), 7.64-7.52 (m, 2H), 7.20 (d, J=8.4 Hz, 1H), 5.97 (d, J=9.8 Hz, 1H), 5.84-5.75 (m, 1H), 5.51 (s, 1H), 5.47-5.32 (m, 1H), 5.20 (br s, 1H), 5.01-4.93 (m, 1H), 4.65 (s, 3H), 4.29 (br s, 1H), 3.64-3.49 (m, 10H), 3.45-3.23 (m, 2H), 2.92-2.70 (m, 3H), 2.66-2.51 (m, 2H), 2.47-2.32 (m, 2H), 2.26-2.18 (m, 1H), 2.19-2.04 (m, 2H), 1.90-1.61 (m, 6H), 1.50-1.38 (m, 1H), 1.36-1.22 (m, 1H), 1.10-1.03 (m, 3H), 0.88 (m, 12H), 0.07 (s, 6H)
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (167.7 mg, 0.201 mmol, 25.43% yield, 97% purity) as a white solid. MS (M+H)+=809.5
1H NMR (400 MHz, CDCl3) δ=9.92-8.85 (m, 1H), 7.78-7.73 (m, 1H), 7.65 (s, 1H), 7.56 (dd, J=1.8, 7.3 Hz, 1H), 7.21 (br d, J=8.4 Hz, 1H), 5.98 (dd, J=3.2, 9.8 Hz, 1H), 5.82-5.74 (m, 1H), 5.52 (s, 1H), 5.41-5.10 (m, 2H), 5.05-4.96 (m, 1H), 4.72-4.56 (m, 3H), 4.34-4.24 (m, 1H), 3.65-3.48 (m, 10H), 3.44-3.25 (m, 2H), 2.92-2.84 (m, 1H), 2.82-2.74 (m, 2H), 2.71-2.62 (m, 1H), 2.60-2.49 (m, 1H), 2.45-2.33 (m, 2H), 2.24 (d, J=12.4 Hz, 1H), 2.19-2.11 (m, 1H), 2.08-1.95 (m, 2H), 1.90-1.82 (m, 2H), 1.76-1.58 (m, 4H), 1.42-1.31 (m, 2H), 1.01-1.01 (m, 3H), 0.93-0.85 (m, 3H)
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (722 mg, 804.89 μmol, 41.60% yield, 98% purity) as a white solid. MS (M+H)+=879.6
1H NMR (400 MHz, Chloroform-d) δ 10.46 (s, 1H), 8.92-8.82 (m, 1H), 8.79-8.50 (m, 1H), 7.73 (t, J=7.9 Hz, 1H), 7.58 (d, J=7.3 Hz, 1H), 5.94 (d, J=9.7 Hz, 1H), 5.76 (dd, J=9.6, 6.1 Hz, 1H), 5.49 (s, 1H), 5.19 (s, 2H), 5.08-4.94 (m, 1H), 4.70-4.59 (m, 1H), 4.31-4.23 (m, 1H), 4.16 (d, J=3.9 Hz, 2H), 3.82-3.69 (m, 4H), 3.67-3.38 (m, 2H), 3.38-3.22 (m, 1H), 3.00-2.71 (m, 3H), 2.67-2.47 (m, 2H), 2.47-2.28 (m, 2H), 2.28-2.03 (m, 3H), 1.89-1.64 (m, 5H), 1.64-1.59 (m, 3H), 1.54-1.38 (m, 1H), 1.37-1.22 (m, 1H), 1.05 (d, J=7.5 Hz, 3H), 0.93-0.80 (m, 12H), 0.06 (d, J=2.2 Hz, 6H).
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (301 mg, 0.378 mmol, 54.45% yield, 96% purity) as a white solid. MS (M+H)+=765.5
1H NMR (400 MHz, CDCl3) δ=10.45 (d, J=15.8 Hz, 1H), 9.51-9.05 (m, 1H), 8.92-8.81 (m, 1H), 7.77-7.71 (m, 1H), 7.62-7.56 (m, 1H), 5.96 (d, J=9.6 Hz, 1H), 5.80-5.74 (m, 1H), 5.50 (s, 1H), 5.29-5.20 (m, 1H), 5.19-4.92 (m, 2H), 4.72-4.52 (m, 1H), 4.35-4.25 (m, 1H), 4.23-4.11 (m, 2H), 3.79-3.70 (m, 4H), 3.69-3.53 (m, 2H), 3.50-3.29 (m, 2H), 2.95-2.80 (m, 2H), 2.80-2.74 (m, 1H), 2.72-2.52 (m, 2H), 2.49-2.38 (m, 1H), 2.36-2.32 (m, 1H), 2.25 (d, J=12.0 Hz, 1H), 2.20-2.13 (m, 1H), 2.10-1.82 (m, 4H), 1.75-1.61 (m, 4H), 1.44-1.31 (m, 2H), 1.07 (d, J=7.4 Hz, 3H), 0.93-0.85 (m, 3H)
To a mixture of 4-amino-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (2 g, 7.32 mmol) and 2-(tert-butoxycarbonylamino) acetic acid (2.56 g, 14.64 mmol) in DMF (20 mL) were added T3P (25 g, 39.29 mmol, 23.36 mL, 50% purity) and Py (5.79 g, 73.19 mmol, 5.91 mL) at 25° C. and the resulting mixture was stirred at 80° C. for 16 h. LCMS showed that the reaction was completed. The reaction mixture was quenched by addition of H2O (60 mL) and extracted with EtOAc (60 mL×3). The combined organic layers were washed with brine (50 mL×3), dried over Na2SO4, filtered and concentrated under reduced pressure. The crude product was purified by reversed-phase HPLC (method: FA condition, MeCN/water) to afford the titled compound (1.28 g, 2.97 mmol, 40.63% yield) as yellow solid. MS (M−Boc+H)+=331.1
To a solution of tert-butyl (2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-2-oxoethyl)carbamate (1.4 g, 3.25 mmol) in dioxane (20 mL) was added HCl/dioxane (4 M, 20 mL) and the resulting mixture was stirred at 20° C. for 2 h. LCMS showed that the reaction was completed. The reaction mixture was concentrated in vacuum to afford the titled compound (1.4 g, crude, HCl) as yellow solid which was used for next step directly. MS (M+H)+=331.1
To a solution of 2-(2-((tert-butoxycarbonyl)amino)ethoxy)acetic acid (573.86 mg, 2.62 mmol) and HATU (1.66 g, 4.36 mmol) in DMF (20 mL) was added DIPEA (845.75 mg, 6.54 mmol, 1.14 mL) and the resulting mixture was stirred at 20° C. for 10 min, 2-amino-N-(2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)acetamide (800 mg, 2.18 mmol, HCl salt) was added and the resulting mixture was stirred at 20° C. for 1 h. LCMS showed that reaction was completed. The mixture was poured into H2O (60 mL) and extracted with EtOAc (50 mL×3), the combined organic layer was washed with brine (150 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 0/1) to afford the titled compound (1.15 g, 2.12 mmol, 97.21% yield) as yellow solid. MS (M−Boc+H)+=432.1
To a solution of tert-butyl (2-(2-((2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-2-oxoethyl)amino)-2-oxoethoxy)ethyl)carbamate (1.15 g, 2.12 mmol) in dioxane (15 mL) was added HCl/dioxane (4 M, 15 mL) and the resulting mixture was stirred at 20° C. for 2 h. LCMS showed that the reaction was completed. The reaction mixture was concentrated in vacuum to afford the titled compound (1 g, crude, HCl) as yellow solid which was used for next step directly. MS (M+H)+=432.2
To the solution of 2-(2-aminoethoxy)-N-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-2-oxoethyl)acetamide (1 g, 2.14 mmol, HCl) and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (1.03 g, 1.71 mmol) in DMF (20 mL) was added TEA (648.84 mg, 6.41 mmol, 892.49 μL) and the resulting mixture was stirred at 20° C. for 12 h. LCMS showed that the reaction was completed. The mixture was poured into water (50 mL) and extracted with EtOAc (50 mL×3), the combined organic layer was washed with brine (100 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 65%-95%, 11 min) to afford the product (800 mg, 834.01 μmol, 39.02% yield) as white solid. 500 mg of the desired product was used for next step directly, another 300 mg of the desired product was re-purified by prep-HPLC (column: Shim-pack C18 150*25*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 77%-87%, 10 min) and lyophilized to afford the titled compound (66 mg, 69.55 μmol, 3.25% yield) as white solid. MS (M+H)+=892.6.
1H NMR (400 MHz, CDCl3) δ=9.91 (brs, 1H), 8.76 (d, J=8.6 Hz, 1H), 7.69-7.65 (m, 1H), 7.51 (d, J=7.2 Hz, 1H), 5.90 (d, J=8.8 Hz, 1H), 5.73-5.66 (m, 1H), 5.52-5.33 (m, 2H), 5.16-4.83 (m, 2H), 4.74-4.59 (m, 1H), 4.27-3.99 (m, 5H), 3.68-5.37 (m, 2H), 3.48-3.27 (m, 2H), 2.89-2.66 (m, 3H), 2.58-2.32 (m, 3H), 2.26-2.08 (m, 4H), 1.88-1.56 (m, 9H), 1.22-1.15 (m, 1H), 1.02 (d, J=7.4 Hz, 3H), 0.85-0.80 (m, 12H), 0.00 (s, 6H).
To a solution of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (2-(2-((2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-2-oxoethyl)amino)-2-oxoethoxy)ethyl)carbamate (500 mg, 560.49 μmol) in THF (10 mL) were added AcOH (168.29 mg, 2.80 mmol, 160.28 μL) and TBAF (1 M, 2.24 mL) and the resulting mixture was stirred at 25° C. for 12 h. LCMS showed that the reaction was completed. The mixture was poured into water (50 mL) and extracted with EtOAc (50 mL×3), the combined organic layer was washed with brine (100 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex Luna C18 150*25 mm*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 35%-65%, 11 min) followed by prep-HPLC (column: Phenomenex Luna C18 150*25 mm*10 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 35%-65%, 11 min) and the eluant was lyophilized to afford the titled compound (124.6 mg, 155.39 μmol, 27.72% yield) as white solid. MS (M+H)+=778.5.
1H NMR (400 MHz, CDCl3) δ=9.99 (brs, 1H), 8.78 (d, J=8.4 Hz, 1H), 7.87-7.67 (m, 2H), 7.57 (d, J=7.4 Hz, 1H), 5.97 (d, J=9.8 Hz, 1H), 5.84-5.71 (m, 1H), 5.56-5.47 (m, 1H), 5.39-5.15 (m, 2H), 5.09-4.87 (brs, 1H), 4.74-4.54 (m, 1H), 4.36-4.22 (m, 2H), 4.20-4.04 (m, 3H), 3.74-3.60 (m, 2H), 3.43 (s, 2H), 2.93-2.52 (m, 5H), 2.49-2.07 (m, 5H), 1.96-1.64 (m, 6H), 1.50-1.29 (m, 2H), 1.07 (d, J=7.6 Hz, 3H), 0.95-0.85 (m, 3H).
To a mixture of methyl 2-[4-(bromomethyl)phenyl]acetate (3 g, 12.34 mmol) in DMF (30 mL) was added KCN (964.29 mg, 14.81 mmol) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed all starting material was consumed completely and no peak with desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=2:1) indicated starting material was consumed completely and one major new spot was detected. The reaction mixture was diluted with H2O (90 mL) and extracted with EtOAc (90 mL×3). The organic layer was washed with saturated Na2CO3 (90 mL×3) and brine (90 mL×3). The organic layer was dried over Na2SO4, filtered and concentrated to afford the titled compound (1.9 g, 10.04 mmol, 81.37% yield) as a yellow oil.
To a solution of methyl 2-(4-(cyanomethyl) phenyl) acetate (1.7 g, 8.98 mmol) in MeOH (17 mL) and HCl (12 M, 1.7 mL) was added Pd/C (20 mg, 10% purity) under N2. The suspension was degassed under vacuum and purged with H2 several times. The mixture was stirred under H2 (15 psi) at 15° C. for 16 h. TLC (SiO2, Petroleum ether:Ethyl acetate=10:1) indicated starting material was consumed completely and two new spots were detected. The reaction mixture was combined with other batches (0.2 g scale) for work-up. The reaction mixture was diluted with MeOH (80 mL) and filtered. The filtrate was concentrated in vacuum to afford the titled compound (2.1 g, crude, HCl) as a yellow solid.
To a mixture of methyl 2-(4-(2-aminoethyl)phenyl)acetate (2.1 g, 10.87 mmol) in DCM (21 mL) were added TEA (3.30 g, 32.60 mmol, 4.54 mL) and (Boc)2O (2.61 g, 11.95 mmol, 2.75 mL) drop-wise at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. TLC (SiO2, Petroleum ether:Ethyl acetate=2:1) indicated starting material was consumed completely and three new spots were detected. The reaction mixture was concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 2/1) to afford the titled compound (718 mg, 2.45 mmol, 22.52% yield) as a yellow oil.
1H NMR (400 MHz, CDCl3) δ=7.24-7.21 (m, 2H), 7.17-7.14 (m, 2H), 4.58 (br s, 1H), 3.70 (s, 3H), 3.61 (s, 2H), 3.37 (d, J=6.2 Hz, 2H), 2.78 (t, J=7.0 Hz, 2H), 1.44 (s, 9H)
To a mixture of methyl 2-(4-(2-((tert-butoxycarbonyl)amino)ethyl)phenyl)acetate (718 mg, 2.45 mmol) in dioxane (10 mL) and H2O (3 mL) was added LiOH H2O (205.41 mg, 4.90 mmol) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. TLC (SiO2, Petroleum ether:Ethyl acetate=1:1) indicated starting material was consumed completely and one new spot was detected. The reaction mixture was concentrated in vacuum. The residue was diluted with H2O (10 mL) and the resulting solution was acidified with HCl (1 N) to adjust the PH=5-6. The reaction mixture was extracted with EtOAc (10 mL×3). The organic layer was dried over Na2SO4, filtered and concentrated to afford the titled compound (710 mg, crude) as a yellow oil. 1H NMR (400 MHz, DMSO-d6) δ=12.55-11.94 (m, 1H), 7.18-7.10 (m, 4H), 3.57 (s, 1H), 3.51 (s, 2H), 3.16-3.06 (m, 2H), 2.66 (t, J=7.4 Hz, 2H), 1.37 (s, 9H)
To a mixture of 4-amino-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (500 mg, 1.83 mmol) and 2-(4-(2-((tert-butoxycarbonyl) amino) ethyl) phenyl) acetic acid (562.25 mg, 2.01 mmol) in DMF (5 mL) were added T3P (6.99 g, 10.98 mmol, 6.53 mL, 50% purity), Py (1.45 g, 18.30 mmol, 1.48 mL) in one portion at 15° C. and the resulting mixture was stirred at 80° C. for 16 h. LCMS showed all starting material was consumed completely and desired mass was detected. TLC (SiO2, Petroleum ether:Ethyl acetate=1:1) indicated starting material was consumed completely and one major new spot was detected. The reaction mixture was diluted with H2O (20 mL) and extracted with EtOAc (20 mL×3). The organic layer was washed with brine (20 mL×3), dried over Na2SO4, filtered and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/1) to afford the titled compound (562 mg, 1.05 mmol, 57.45% yield) as a yellow solid. MS (M−100+H)+=435.3
To a mixture of tert-butyl 4-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-2-oxoethyl)phenethylcarbamate (560 mg, 1.05 mmol) in dioxane (5 mL) was added HCl/dioxane (4 M, 10 mL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 2 h. TLC (SiO2, Petroleum ether:Ethyl acetate=1:1) indicated starting material was consumed completely and one new spot were detected. The reaction mixture was concentrated in vacuum to afford the titled compound (495 mg, 0.946 mmol, 90.31% yield, 90% purity, HCl) as a yellow solid. MS (M+H)+=435.1
To a mixture of 2-(4-(2-aminoethyl) phenyl)-N-(2-(2, 6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)acetamide (495 mg, 1.05 mmol, HCl) in DMAC (8 mL) were added TEA (319.10 mg, 3.15 mmol) and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (693.52 mg, 1.16 mmol) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 16 h. LCMS showed all starting material was consumed completely and one peak with desired mass was detected. The reaction mixture was diluted with H2O (20 mL) and extracted with EtOAC (20 mL×3). The organic layer was washed with brine (20 mL×3), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 70%-100%, 11 min) and then lyophilized to afford the titled compound (709 mg, 0.776 mmol, 73.84% yield, 98% purity) as a white solid. MS (M+H)+=895.6
1H NMR (400 MHz, CDCl3) δ=9.30-9.18 (m, 1H), 8.88-8.81 (m, 1H), 8.57-8.41 (m, 1H), 7.69 (t, J=8.0 Hz, 1H), 7.53-7.47 (m, 1H), 7.27-7.18 (m, 4H), 6.07-5.93 (m, 1H), 5.83-5.75 (m, 1H), 5.60-5.49 (m, 1H), 5.42-5.16 (m, 2H), 5.00-4.87 (m, 1H), 4.73-4.65 (m, 1H), 4.31-4.26 (m, 1H), 3.84-3.76 (m, 2H), 3.57-3.43 (m, 1H), 3.36-3.24 (m, 1H), 2.85-2.68 (m, 5H), 2.61-2.54 (m, 2H), 2.47-2.39 (m, 1H), 2.37-2.32 (m, 1H), 2.29-2.22 (m, 1H), 2.16-2.07 (m, 2H), 1.87-1.72 (m, 5H), 1.53-1.44 (m, 1H), 1.37-1.20 (m, 2H), 1.13-1.01 (m, 3H), 0.90 (s, 12H), 0.07 (s, 6H)
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl 4-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-2-oxoethyl)phenethylcarbamate (607 mg, 678.12 μmol) in THF (8 mL) were added AcOH (203.61 mg, 3.39 mmol) and TBAF (1 M, 2.71 mL) in one portion at 15° C. and the resulting mixture was stirred at 15° C. for 16 h.
LCMS showed starting material was consumed completely and one peak with desired mass was detected. The reaction mixture was quenched with saturated NH4Cl (20 mL) and extracted with EtOAc (20 mL×3). The organic layer was washed with saturated NH4Cl (20 mL×3), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 52%-82%, 11 min) and then lyophilized to afford 476 mg product with 86% by HPLC and LCMS. The product was re-purified by column chromatography (SiO2, Ethyl acetate:Methanol=10:1) to afford the titled compound (327.1 mg, 0.402 mmol, 59.30% yield, 96% purity) as a white solid. MS (M+H)+=781.4
1H NMR (400 MHz, CDCl3) δ=9.19 (d, J=18.6 Hz, 1H), 8.90-8.79 (m, 1H), 7.71-7.65 (m, 1H), 7.51 (d, J=7.2 Hz, 1H), 7.35-7.29 (m, 1H), 7.27-7.24 (m, 4H), 6.07-5.91 (m, 1H), 5.86-5.74 (m, 1H), 5.59-5.49 (m, 1H), 5.30-5.19 (m, 1H), 4.98-4.86 (m, 1H), 4.71-4.48 (m, 1H), 4.37-4.22 (m, 1H), 3.86-3.76 (m, 2H), 3.64-3.21 (m, 2H), 2.86-2.55 (m, 7H), 2.48-2.22 (m, 3H), 2.12-2.00 (m, 2H), 1.98-1.80 (m, 3H), 1.74-1.60 (m, 5H), 1.51-1.35 (m, 2H), 1.23-1.04 (m, 3H), 0.95-0.86 (br s, 3H) Examples 148 to 151. In a manner similar to the other examples, Compounds 148 to 151 were obtained.
To a solution of 5-(((1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl)oxy)-4,4-dimethyl-5-oxopentanoic acid (150 mg, 260.04 μmol) in DMF (3 mL) was added HATU (150.00 mg, 394.50 μmol) and DIPEA (111.30 mg, 861.17 μmol, 150.00 μL) and the mixture was stirred at 25° C. for 15 min. Then a solution of 3-(5-((2-(2-(2-aminoethoxy)ethoxy)ethyl)amino)-4-oxobenzo[d][1,2,3]triazin-3(4H)-yl)piperidine-2,6-dione (138.00 mg, 313.01 μmol, HCl) and DIPEA (55.65 mg, 430.58 μmol, 75.00 μL) in DMF (0.4 mL) was added and the mixture was stirred at 25° C. for 1 h. LCMS showed the desired mass was detected. The mixture was diluted with H2O (10 mL) and extracted with EtOAc (10 mL×3). The combined organic layer was washed with brine (10 mL×2), dried over Na2SO4 and filtered. The filtrate was concentrated under reduced pressure. The residue was purified by flash silica gel chromatography (5 g SepaFlash® Silica Flash Column, Eluent of 20˜70% Ethyl acetate/Petroleum ether gradient @ 50 mL/min) to afford the titled compound (130 mg, 128.21 mol, 49.31% yield, 95% purity) as yellow oil. MS (M+H)+=963.9
To a solution of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl 5-((2-(2-(2-((3-(2,6-dioxopiperidin-3-yl)-4-oxo-3,4-dihydrobenzo[d][1,2,3]triazin-5-yl)amino)ethoxy)ethoxy)ethyl)amino)-2,2-dimethyl-5-oxopentanoate (190 mg, 197.25 μmol) in THF (4 mL) was added TBAF (4 M, 190.00 μL) at 0° C. The mixture was stirred at 25° C. for 2 h. LCMS showed the desired mass was detected. The mixture was diluted with H2O (10 mL) at 0° C. and extracted with EtOAc (10 mL×3). The combined organic layer was washed with brine (10 mL×2), dried over Na2SO4 and filtered. The filtrate was concentrated under reduced pressure. The residue was purified by prep-TLC (Ethyl acetate:Methanol=10:1) to afford the titled compound (53.2 mg, 58.28 μmol, 29.54% yield, 93% purity) as yellow solid. MS (M+H)+=849.5
1H NMR (400 MHz, CDCl3) δ=9.05 (br s, 1H), 8.37 (br s, 1H), 7.70 (t, J=8.1 Hz, 1H), 7.30 (d, J=7.2 Hz, 1H), 6.81 (d, J=8.6 Hz, 1H), 6.42-6.36 (m, 1H), 5.98 (d, J=9.8 Hz, 1H), 5.81-5.75 (m, 1H), 5.70-5.63 (m, 1H), 5.53 (br s, 1H), 5.32 (br s, 1H), 4.62 (br s, 1H), 4.28 (br s, 1H), 4.15-4.04 (m, 1H), 3.77 (t, J=5.1 Hz, 2H), 3.71-3.64 (m, 4H), 3.62-3.57 (m, 2H), 3.45-3.39 (m, 4H), 2.97-2.84 (m, 3H), 2.75-2.60 (m, 2H), 2.47-2.31 (m, 3H), 2.29-2.17 (m, 3H), 2.07-2.01 (m, 1H), 2.00-1.83 (m, 3H), 1.82-1.67 (m, 4H), 1.52-1.44 (m, 1H), 1.42-1.34 (m, 2H), 1.14 (d, J=12.1 Hz, 6H), 1.07-1.02 (m, 3H), 0.91-0.86 (m, 3H).
To the solution of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (4 g, 6.67 mmol) in THF (40 mL) was added TBAF (1 M, 26.68 mL, in THF) and AcOH (2.00 g, 33.35 mmol, 1.91 mL) and the resulting mixture was stirred at 25° C. for 4 h. TLC (Petroleum ether/Ethyl acetate=0/1) showed that the reaction was completed. The mixture was poured into water (200 mL) and extracted with EtOAc (100 mL×3), the combined organic layer was washed with brine (200 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by silica gel column (Petroleum ether:Ethyl acetate=1:1-0:1) to afford the titled compound as white solid. MS (M+H)+=486.2
To the solution of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (500 mg, 1.03 mmol) and 4-((2-(2-(2-aminoethoxy)ethoxy)ethyl)amino)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (452.17 mg, 1.03 mmol, HCl) in DMF (5 mL) was added TEA (311.34 mg, 3.08 mmol, 428.26 μL) and the resulting mixture was stirred at 20° C. for 12 h. LCMS showed that the reaction was completed. The mixture was poured into water (50 mL) and extracted with EtOAc (50 mL×3), the combined organic layer was washed with brine (100 mL), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-TLC (Petroleum ether/Ethyl acetate=1/1). The product was diluted with MeCN and water which was lyophilized to afford the titled compound (120 mg, 155.56 μmol, 26.08% yield, 95% purity) as yellow solid. MS (M+H)+=733.4
1H NMR (400 MHz, CDCl3) δ=8.60-8.41 (m, 1H), 7.50 (t, J=7.8 Hz, 1H), 7.11 (d, J=7.1 Hz, 1H), 6.95-6.79 (m, 2H), 6.62-6.44 (m, 1H), 6.03-5.94 (m, 2H), 5.77 (dd, J=6.1, 9.4 Hz, 1H), 5.50 (s, 1H), 5.30-5.15 (m, 2H), 4.97-4.86 (m, 1H), 4.45-4.31 (m, 1H), 3.70 (t, J=5.1 Hz, 2H), 3.66-3.51 (m, 6H), 3.49-3.29 (m, 4H), 2.92-2.71 (m, 3H), 2.47-2.32 (m, 3H), 2.31-2.20 (m, 2H), 2.19-2.04 (m, 2H), 1.96-1.82 (m, 2H), 1.77-1.66 (m, 2H), 1.48-1.30 (m, 2H), 1.07 (d, J=7.3 Hz, 3H), 0.89 (d, J=6.8 Hz, 3H).
To a solution of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (11-(((S)-1-((2S,4R)-4-hydroxy-2-((4-(4-methylthiazol-5-yl)benzyl)carbamoyl)pyrrolidin-1-yl)-3,3-dimethyl-1-oxobutan-2-yl)amino)-11-oxoundecyl)carbamate (100 mg, 90.60 μmol, 87% purity) in THF (1 mL) was added NaOH (1 M, 906.00 μL) and the mixture was stirred at 60° C. for 14 h. LCMS showed the desired mass was detected. The reaction mixture was adjusted the pH=7 with 1 N HCl and the solution was concentrated under reduce pressure. The crude was purified by prep-HPLC (column: Waters Xbridge 150*25 mm*5 μm; mobile phase: [water (10 mM NH4HCO3)-ACN]; B %: 31%-61%, 10 min) and the eluent was lyophilized to the titled compound (20.7 mg, 20.31 μmol, 22.42% yield, 96% purity) as a white solid. MS (M+H)+=978.3.
1H NMR (400 MHz, DMSO-d6) δ=8.98 (s, 1H), 8.56 (t, J=5.8 Hz, 1H), 7.84 (br d, J=9.4 Hz, 1H), 7.44-7.36 (m, 4H), 6.94 (br t, J=5.5 Hz, 1H), 5.89 (br d, J=9.5 Hz, 1H), 5.79-5.73 (m, 1H), 5.44 (br s, 1H), 5.26-4.92 (m, 2H), 4.54 (d, J=9.4 Hz, 1H), 4.47-4.39 (m, 2H), 4.34 (br s, 1H), 4.25-4.17 (m, 1H), 4.01-3.93 (m, 1H), 3.70-3.60 (m, 2H), 3.52-3.44 (m, 1H), 3.31-3.28 (m, 1H), 2.99-2.86 (m, 2H), 2.44 (s, 3H), 2.35-2.27 (m, 3H), 2.25-2.15 (m, 2H), 2.14-1.99 (m, 2H), 1.94-1.77 (m, 3H), 1.69-1.58 (m, 1H), 1.51-1.30 (m, 8H), 1.26-1.09 (m, 15H), 1.03 (br d, J=7.3 Hz, 3H), 0.95-0.90 (m, 9H), 0.82 (d, J=6.9 Hz, 3H).
To a mixture of 2-amino-6-fluoro-benzoic acid (5 g, 32.23 mmol) and 3-aminopiperidine-2, 6-dione;hydrochloride (5.84 g, 35.46 mmol) in DMF (100 mL) were added HOBt (4.79 g, 35.46 mmol), EDCI (6.80 g, 35.46 mmol) and DIPEA (12.50 g, 96.70 mmol, 16.84 mL) at 25° C. The mixture was stirred at 25° C. for 16 h. LCMS showed the 2-amino-6-fluoro-benzoic acid was consumed completely and a main peak with desired mass. The mixture was poured into water (80 mL) and filtered, the filter cake was collected and dried afford the titled compound (8 g, 29.56 mmol, 91.70% yield, 98% purity) as blue solid. MS (M+H)+=266.1
A mixture 2-amino-N-(2,6-dioxopiperidin-3-yl)-6-fluorobenzamide (7.9 g, 29.78 mmol) and NaNO2 (3.49 g, 50.63 mmol) in AcOH (100 mL) was stirred at 25° C. for 2 hr. LCMS showed the 2-amino-N-(2, 6-dioxo-3-piperidyl)-6-fluoro-benzamide was consumed completely and a main peak with desired mass. The mixture was poured into water (80 mL) and filtered, the filter cake was collected and dried afford the titled compound (7.1 g, 24.68 mmol, 82.85% yield, 96% purity) as white solid. MS (M+H)+=277.0
1H NMR (400 MHz, DMSO-d6) δ=11.20 (brs, 1H), 8.19-8.03 (m, 2H), 7.81-7.77 (m, 1H), 5.97 5.99-5.94 (m, 1H), 3.04-2.88 (m, 1H), 2.76-2.60 (m, 2H), 2.33-2.22 (m, 1H).
A solution of 3-(5-fluoro-4-oxobenzo[d][1,2,3]triazin-3(4H)-yl)piperidine-2,6-dione (3 g, 10.86 mmol), tert-butyl (2-(2-(2-aminoethoxy)ethoxy)ethyl)carbamate (3.24 g, 13.03 mmol) and TEA (3.30 g, 32.58 mmol, 4.54 mL) in dioxane (50 mL) was stirred at 100° C. for 12 h. LCMS showed the 3-(5-fluoro-4-oxobenzo[d][1,2,3]triazin-3(4H)-yl)piperidine-2,6-dione was consumed completely and a main peak with desired mass. The mixture solution was concentrated under reduced pressure. The residue was purified by flash silica gel chromatography (45 g SepaFlash® Silica Flash Column, Eluent of 0˜30% Ethyl acetate/Petroleum ether gradient @ 65 mL/min) afford the titled compound (5.6 g, 10.43 mmol, 96.06% yield, 94% purity) as yellow solid. MS (M−100+H)+=405.1
To a solution of tert-butyl (2-(2-(2-((3-(2,6-dioxopiperidin-3-yl)-4-oxo-3,4-dihydrobenzo[d][1,2,3]triazin-5-yl)amino)ethoxy)ethoxy)ethyl)carbamate (2.3 g, 4.56 mmol) in dioxane (2 mL) was added HCl/dioxane (4 M, 20 mL) at 25° C. The resulting mixture was stirred at 25° C. for 0.5 hr. TLC (petroleumether:ethylacetate=1:1; Rf=0) showed the starting material was consumed completely and found new spot. LCMS showed a main peak with desired mass. The mixture solution was concentrated under reduced pressure to give the crude product. The crude product was dissolved with cold deionized water (40 mL) and lyophilized to give the titled compound (1.6 g, crude, HCl) as brown solid. It was used for the next step directly. MS (M+H)+=405.1
1H NMR (400 MHz, D2O) δ=7.71-7.63 (m, 1H), 7.13 (d, J=8.0 Hz, 1H), 6.88 (d, J=8.4 Hz, 1H), 5.83 (dd, J=5.6, 12.4 Hz, 1H), 3.76 (t, J=5.2 Hz, 2H), 3.70-3.66 (m, 6H), 3.39 (t, J=5.3 Hz, 2H), 3.15-3.06 (m, 2H), 2.96-2.82 (m, 2H), 2.80-2.67 (m, 1H), 2.40-2.35 (m, 1H)
To a solution of 3-(5-((2-(2-(2-aminoethoxy)ethoxy)ethyl)amino)-4-oxobenzo[d][1,2,3]triazin-3(4H)-yl)piperidine-2,6-dione (1.1 g, 2.50 mmol, HCl) in DMAC (20 mL) was added TEA (1.01 g, 9.98 mmol, 1.39 mL) followed by (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (1.50 g, 2.50 mmol). The mixture was stirred at 100° C. for 16 hours. LCMS showed (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate was consumed completely and a main peak with desired mass. The reaction mixture was diluted with H2O (50 mL) and extracted with EtOAc (80 mL×3). The combined organic layers were washed with brine (150 mL×3), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 67%-97%, 10 min) and lyophilized to afford the titled compound (1.2 g, 1.29 mmol, 51.70% yield, 93% purity) as yellow solid. MS (M+H)+=864.9
1H NMR (400 MHz, DMSO-d6) δ=11.16 (s, 1H), 8.33-8.30 (m, 1H), 7.80 (t, J=8.2 Hz, 1H), 7.23 (d, J=8.0 Hz, 1H), 7.04-6.87 (m, 2H), 5.95-5.82 (m, 2H), 5.79-5.64 (m, 1H), 5.44 (s, 1H), 5.04 (s, 1H), 4.48-4.45 (m, 1H), 4.27 (s, 1H), 3.72-3.61 (m, 2H), 3.55-3.48 (m, 4H), 3.42-3.35 (m, 4H), 3.24-3.08 (m, 2H), 3.00-2.86 (m, 1H), 2.74-2.57 (m, 3H), 2.38-2.20 (m, 5H), 1.97-1.74 (m, 3H), 1.74-1.56 (m, 3H), 1.52-1.38 (m, 1H), 1.38-1.17 (m, 2H), 1.01 (d, J=7.2 Hz, 3H), 0.85-0.78 (m, 12H), 0.03 (s, 6H).
To a solution of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl(2-(2-(2-((3-(2,6-dioxopiperidin-3-yl)-4-oxo-3,4-dihydrobenzo[d][1,2,3]triazin-5-yl)amino)ethoxy)ethoxy)ethyl)carbamate (200 mg, 231.19 μmol) in THF (5 mL) was added TBAF (1 M, 924.76 μL) at 0° C. The mixture was stirred at 15° C. for 2 hours. LCMS showed the (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl(2-(2-(2-((3-(2,6-dioxopiperidin-3-yl)-4-oxo-3,4-dihydrobenzo[d][1,2,3]triazin-5-yl)amino)ethoxy)ethoxy)ethyl)carbamate was consumed completely and a main peak with desired mass. The mixture was diluted with ethyl acetate (20 mL) washed NH4Cl solution (10 mL×3), dried over Na2SO4, filtered and concentrated under reduced pressure at 15° C. The residue was purified prep-HPLC (column: Waters Xbridge 150*25 mm*5 μm; mobile phase: [water (10 mM NH4HCO3)-ACN]; B %: 37%-67%, 9 min) and lyophilized to give crude product. The crude product was purified prep-HPLC (column: Waters Xbridge 150*25 mm*5 μm; mobile phase: [water (10 mM NH4HCO3)-ACN]; B %: 37%-67%, 9 min) followed by prep-TLC (petroleumether:ethylacetate=1:1; Rf=0.5) to afford the titled compound (17.5 mg, 22.84 μmol, 9.88% yield, 98% purity) as yellow solid. MS (M+H)+=751.1
1H NMR (400 MHz, DMSO-d6) δ=11.16 (brs, 1H), 8.33-8.30 (m, 1H), 7.80 (t, J=8.2 Hz, 1H), 7.23 (d, J=7.8 Hz, 1H), 7.00 (d, J=8.8 Hz, 2H), 5.97-5.82 (m, 2H), 5.75-5.65 (m, 1H), 5.44 (brs, 1H), 5.17 (d, J=3.2 Hz, 1H), 5.04 (d, J=2.8 Hz, 1H), 4.52-4.42 (m, 1H), 4.14-4.05 (m, 1H), 3.69-3.60 (m, 2H), 3.58-3.47 (m, 4H), 3.43-3.36 (m, 4H), 3.16-3.02 (m, 2H), 3.01-2.86 (m, 1H), 2.71-2.57 (m, 3H), 2.40-2.17 (m, 5H), 1.96-1.83 (m, 3H), 1.70-1.57 (m, 3H), 1.51-1.42 (m, 1H), 1.29-1.22 (m, 2H), 1.01 (d, J=7.6 Hz, 3H), 0.82 (d, J=6.8 Hz, 3H).
To a mixture of 4-((3-(2-(2-(3-aminopropoxy) ethoxy)ethoxy)propyl)amino)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (387 mg, crude, HCl) in DMF (5 mL) were added TEA (229.02 mg, 2.26 mmol, 315.02 μL) and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (497.73 mg, 829.85 μmol) in one portion at 20° C. and the resulting mixture was stirred at 20° C. for 16 h. LCMS showed all starting material was consumed completely and one peak with desired mass was detected. The reaction mixture was diluted with H2O (10 mL) and extracted with EtOAc (10 mL×3). The organic layer was washed with brine (10 mL×3), dried over Na2SO4, filtered and concentrated. The residue was purified by flash silica gel chromatography (10 g SepaFlash® Silica Flash Column, Eluent of 0-70% Ethyl acetate/Petroleum ether gradient @ 80 mL/min) to afford the titled compound (680 mg, 725.57 μmol, 96.18% yield) as a green oil. MS (M+H)+=937.6
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (3-(2-(2-(3-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)propoxy)ethoxy)ethoxy)propyl)carbamate (200 mg, 213.40 μmol) in THF (4 mL) were added AcOH (64.08 mg, 1.07 mmol, 61.02 μL) and TBAF (1 M in solution THF, 853.61 μL) drop-wise at 20° C. and the resulting mixture was stirred at 20° C. for 16 h. LCMS showed starting material was consumed completely and one peak desired with mass was detected. The reaction mixture was quenched with saturated NH4Cl (10 mL) and extracted with EtOAc (10 mL×3). The organic layer was washed with saturated NH4Cl (10 mL×3), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Unisil 3-100 C18 μLtra 150*50 mm*3 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 43%-73%, 10 min) and then lyophilized to afford product A (101 mg) with 87% by HPLC and LCMS. The product (101 mg) was purified by prep-TLC (SiO2, DCM: MeOH=20:1) to afford the titled compound (71.3 mg, 84.04 μmol, 39.38% yield, 97% purity) as a yellow solid. MS (M+H)+=822.9
1H NMR (400 MHz, DMSO-d6) δ=11.08 (s, 1H), 7.61-7.54 (m, 1H), 7.10 (d, J=8.7 Hz, 1H), 7.02 (d, J=7.0 Hz, 1H), 6.99-6.94 (m, 1H), 6.66 (t, J=5.7 Hz, 1H), 5.90 (d, J=9.8 Hz, 1H), 5.76 (dd, J=5.7, 9.3 Hz, 1H), 5.46 (s, 1H), 5.17 (d, J=3.3 Hz, 1H), 5.08-5.01 (m, 2H), 4.52-4.42 (m, 1H), 4.12-4.05 (m, 1H), 3.56-3.52 (m, 2H), 3.51-3.47 (m, 6H), 3.46-3.42 (m, 2H), 3.37-3.33 (m, 4H), 3.29 (s, 2H), 3.10-3.08 (m, 2H), 2.91-2.83 (m, 1H), 2.65-2.60 (m, 1H), 2.54-2.52 (m, 2H), 2.42-2.39 (m, 1H), 2.35-2.30 (m, 2H), 2.25-2.22 (m, 1H), 2.04-1.98 (m, 1H), 1.85-1.74 (m, 4H), 1.69-1.62 (m, 2H), 1.60-1.56 (m, 2H), 1.50-1.43 (m, 1H), 1.35-1.25 (m, 2H), 1.03 (br d, J=7.3 Hz, 3H), 0.83 (d, J=7.0 Hz, 3H)
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (61.1 mg, 65.21 μmol, 23.22% yield, 98% purity) as a white solid. MS (M+H)+=918.4.
1H NMR (400 MHz, DMSO-d6) δ=8.98 (s, 1H), 8.57 (t, J=5.9 Hz, 1H), 7.84 (d, J=9.5 Hz, 1H), 7.46-7.33 (m, 4H), 6.99 (br t, J=5.6 Hz, 1H), 5.91 (d, J=9.5 Hz, 1H), 5.76 (dd, J1=6.1, J2=9.4 Hz, 1H), 5.46 (br s, 1H), 5.19 (d, J=3.3 Hz, 1H), 5.12 (d, J=3.5 Hz, 1H), 5.03 (br d, J=2.9 Hz, 1H), 4.54 (d, J=9.4 Hz, 1H), 4.51-4.38 (m, 3H), 4.37-4.32 (m, 1H), 4.21 (dd, J1=5.4, J2=15.9 Hz, 1H), 4.13-4.05 (m, 1H), 3.73-3.56 (m, 2H), 3.03-2.85 (m, 2H), 2.67-2.59 (m, 1H), 2.53-2.51 (m, 1H), 2.44 (s, 3H), 2.37-2.33 (m, 2H), 2.28-2.19 (m, 2H), 2.12-2.00 (m, 2H), 1.93-1.88 (m, 1H), 1.87-1.75 (m, 3H), 1.72-1.57 (m, 3H), 1.54-1.40 (m, 3H), 1.25-1.39 (m, 4H), 1.21 (br s, 6H), 1.04 (br d, J=7.3 Hz, 3H), 0.93 (s, 9H), 0.84 (d, J=6.9 Hz, 3H).
In a manner similar to the other examples, Compound 159 was obtained.
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (460.8 mg, 463.07 μmol, 38.28% yield, 96.5% purity) as a white solid and another the titled compound (173.8 mg, 178.28 μmol, 14.74% yield, 98.5% purity) as a white solid. MS (M+H)+=960.7.
1H NMR (400 MHz, DMSO-d6) δ=8.98 (s, 1H), 8.56 (br t, J=5.9 Hz, 1H), 7.84 (br d, J=9.4 Hz, 1H), 7.44-7.35 (m, 4H), 6.97 (br t, J=5.3 Hz, 1H), 5.91 (br d, J=9.5 Hz, 1H), 5.79-5.73 (m, 1H), 5.46 (br s, 1H), 5.20-5.17 (m, 1H), 5.13-5.10 (m, 1H), 5.06-5.01 (m, 1H), 4.56-4.40 (m, 4H), 4.35 (br s, 1H), 4.25-4.18 (m, 1H), 4.12-4.06 (m, 1H), 3.70-3.61 (m, 2H), 3.30-3.29 (m, 1H), 3.01-2.85 (m, 2H), 2.64-2.58 (m, 1H), 2.47-2.40 (m, 4H), 2.39-2.19 (m, 5H), 2.14-2.00 (m, 2H), 1.94-1.76 (m, 4H), 1.71-1.59 (m, 2H), 1.50-1.44 (m, 2H), 1.37-1.17 (m, 16H), 1.04 (br d, J=7.1 Hz, 3H), 0.93 (s, 9H), 0.84 (br d, J=6.8 Hz, 3H).
To a solution of hex-5-ynoic acid (132.05 mg, 1.18 mmol, 128.20 μL) in DMF (4 mL) were added HATU (447.79 mg, 1.18 mmol) and DIPEA (276.74 mg, 2.14 mmol, 372.96 μL). The mixture was stirred at 20° C. for 10 min and a solution of (2S,4R)-1-((S)-2-amino-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (0.5 g, 1.07 mmol, HCl salt) in DMF (4 mL) with DIPEA (276.74 mg, 2.14 mmol, 372.96 μL) was added drop-wise at 20° C. and the resulting mixture was stirred at 20° C. for 1 h. LCMS showed all starting material was consumed completely and one peak with peak with desired mass. The reaction mixture was diluted with H2O (15 mL) and extracted with EtOAc (15 mL×3). The combined organic layer was washed with brine (15 mL×3), dried over Na2SO4, filtered. The filtrate was concentrated. The residue was purified by flash silica gel chromatography (10 g SepaFlash® Silica Flash Column, Eluent of 0˜100% Ethyl acetate/Petroleum to 0˜10% Dichloromethane/Methanol gradient @ 80 mL/min) to afford the titled compound (568 mg, 1.06 mmol, 99.10% yield, 98% purity) as a colorless oil. MS (M+H)+=525.3
A mixture of tert-butyl N-(4-bromobutyl) carbamate (0.5 g, 1.98 mmol, 406.50 μL) and NaN3 (154.69 mg, 2.38 mmol) in DMF (10 mL) was stirred at 80° C. for 16 h. TLC (SiO2, Petroleum ether:Ethyl acetate=5:1) indicated the starting material was consumed completely and one major new spot was detected. The reaction mixture was diluted with H2O (15 mL) and extracted with EtOAc (15 mL×3). The combined organic layer was washed with brine (15 mL×3), dried over Na2SO4, filtered. The filtrate was concentrated to afford the titled compound (425 mg, crude) as a yellow oil.
To a mixture of (2S,4R)-1-((S)-2-(hex-5-ynamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (518 mg, 987.28 μmol) and tert-butyl (4-azidobutyl)carbamate (253.85 mg, 1.18 mmol) in MeOH (10 mL) were added CuSO4 (189.09 mg, 1.18 mmol, 181.82 μL) and sodium L-ascorbate (254.26 mg, 1.28 mmol) in one portion at 20° C. and the resulting mixture was stirred at 20° C. for 16 h. LCMS showed all starting material was consumed completely and one peak with desired mass. The reaction mixture was diluted with MeOH (20 mL) and filtered. The filtrate was concentrated in vacuum. The residue was purified by flash silica gel chromatography (10 g SepaFlash® Silica Flash Column, Eluent of 0-10% Dichloromethane/Methanol gradient @ 80 mL/min) to afford the titled compound (687 mg, 892.52 μmol, 90.40% yield, 96% purity) as a yellow oil. MS (M+H)+=739.2
To a mixture of tert-butyl (4-(4-(4-(((S)-1-((2S,4R)-4-hydroxy-2-((4-(4-methylthiazol-5-yl)benzyl)carbamoyl)pyrrolidin-1-yl)-3,3-dimethyl-1-oxobutan-2-yl)amino)-4-oxobutyl)-1H-1,2,3-triazol-1-yl)butyl)carbamate (687 mg, 929.71 μmol) in dioxane (6 mL) was added HCl/dioxane (4 M, 12 mL) in one portion at 20° C. and the resulting mixture was stirred at 20° C. for 0.5 h. LCMS showed starting material was consumed completely and one peak with desired mass was detected. The reaction mixture was concentrated in vacuum to afford the titled compound (720 mg, crude, HCl salt) as a yellow solid. MS (M+H)+=639.3
To a mixture of (2S,4R)-1-((S)-2-(4-(1-(4-aminobutyl)-1H-1,2,3-triazol-4-yl)butanamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (720 mg, 1.13 mmol, HCl salt) in DMF (7 mL) were added TEA (342.14 mg, 3.38 mmol, 470.62 μL) and (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-nitrophenyl) carbonate (743.60 mg, 1.24 mmol) in one portion at 20° C. and the resulting mixture was stirred at 30° C. for 16 h. LCMS showed all starting material was consumed completely and one peak with desired mass was detected. The reaction mixture was diluted with H2O (14 mL) and extracted with EtOAc (14 mL×3). The organic layer was washed with brine (14 mL×3), dried over Na2SO4, filtered. The filtrate was concentrated. The residue was purified by flash silica gel chromatography (10 g SepaFlash® Silica Flash Column, Eluent of 0˜100% Ethyl acetate/Petroleum to 0˜10% Dichloromethane/Methanol gradient @ 80 mL/min) to afford the titled compound (576 mg, 471.49 μmol, 41.83% yield, 90% purity) as a colorless oil. MS (M+H)+=1099.8
To a mixture of (1S,3R,7S,8S,8aR)-8-(2-((2R,4R)-4-((tert-butyldimethylsilyl)oxy)-6-oxotetrahydro-2H-pyran-2-yl)ethyl)-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl (4-(4-(4-(((S)-1-((2S,4R)-4-hydroxy-2-((4-(4-methylthiazol-5-yl)benzyl)carbamoyl)pyrrolidin-1-yl)-3,3-dimethyl-1-oxobutan-2-yl)amino)-4-oxobutyl)-1H-1,2,3-triazol-1-yl)butyl)carbamate (556 mg, 505.68 μmol) in THF (10 mL) were added AcOH (151.83 mg, 2.53 mmol, 144.60 μL) and TBAF (1 M, 2.02 mL) in one portion at 20° C. and the resulting mixture was stirred at 30° C. for 16 h. LCMS showed starting material was consumed completely and one peak with desired mass was detected. The reaction mixture was quenched with saturated NH4Cl (15 mL) and extracted with EtOAc (15 mL×3). The combined organic layer was washed with saturated NH4Cl (15 mL×3), dried over Na2SO4, filtered and concentrated. The residue was purified by prep-HPLC (column: Phenomenex luna C18 150*40 mm*15 μm; mobile phase: [water (0.225% FA)-ACN]; B %: 35%-65%, 10 min) and the eluent was lyophilized to afford the titled compound (175.8 mg, 167.73 μmol, 33.17% yield, 94% purity) as a white solid. MS (M+H)+=985.7
1H NMR (400 MHz, DMSO-d6) δ=8.98 (s, 1H), 8.56 (t, J=6.0 Hz, 1H), 7.90 (br d, J=9.3 Hz, 1H), 7.80 (s, 1H), 7.43-7.36 (m, 4H), 7.05 (br t, J=5.6 Hz, 1H), 5.91 (br d, J=9.7 Hz, 1H), 5.76 (dd, J=6.1, 9.5 Hz, 1H), 5.46 (br s, 1H), 5.25-5.08 (m, 2H), 5.04 (br d, J=3.1 Hz, 1H), 4.55 (d, J=9.3 Hz, 1H), 4.52-4.44 (m, 2H), 4.43-4.40 (m, 1H), 4.35 (br s, 1H), 4.31-4.17 (m, 4H), 4.09 (br d, J=3.2 Hz, 1H), 3.71-3.62 (m, 2H), 2.98 (br d, J=6.4 Hz, 2H), 2.62-2.55 (m, 3H), 2.44 (s, 3H), 2.41 (br d, J=1.7 Hz, 1H), 2.38-2.36 (m, 1H), 2.31-2.27 (m, 1H), 2.26-2.20 (m, 2H), 2.20-2.15 (m, 1H), 2.07-1.99 (m, 1H), 1.86-1.72 (m, 8H), 1.70-1.63 (m, 2H), 1.50-1.42 (m, 1H), 1.35-1.26 (m, 4H), 1.02 (br d, J=7.2 Hz, 3H), 0.94 (s, 9H), 0.84 (d, J=7.0 Hz, 3H).
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (6.7 mg, 6.11 μmol, 8.41% yield, 90% purity) as a white solid. MS (M+H)+=987.6
1H NMR (400 MHz, MeOD) δ 8.88 (s, 1H), 7.49-7.40 (m, 4H), 5.98-5.89 (m, 1H), 5.80-5.71 (m, 1H), 5.49-5.42 (m, 1H), 5.18-5.10 (m, 1H), 4.91-4.87 (m, 2H), 4.73-4.63 (m, 1H), 4.58-4.48 (m, 3H), 4.36 (d, J=15.3 Hz, 1H), 4.27-4.22 (m, 1H), 3.95-3.85 (m, 1H), 3.82-3.77 (m, 1H), 3.17-3.02 (m, 2H), 3.01-2.88 (m, 2H), 2.75-2.67 (m, 1H), 2.56-2.49 (m, 1H), 2.48 (s, 3H), 2.43-2.34 (m, 4H), 2.32-2.17 (m, 4H), 2.11-1.90 (m, 4H), 1.83-1.63 (m, 7H), 1.59-1.37 (m, 5H), 1.32-1.16 (m, 6H), 1.10 (d, J=7.5 Hz, 3H), 1.06-1.01 (m, 9H), 0.91 (d, J=6.8 Hz, 3H)
In a manner similar to the other examples, Compounds 163 to 165 were obtained.
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (16 mg, 15.66 μmol, 9.75% yield, 98.9% purity) as a white solid. MS (M+H)+=1006.3
1H NMR (400 MHz, DMSO-d6) δ=8.98 (s, 1H), 8.49 (br t, J=5.3 Hz, 1H), 7.40 (d, J=7.6 Hz, 1H), 7.31-7.26 (m, 1H), 7.01-6.92 (m, 3H), 5.90 (br d, J=9.5 Hz, 1H), 5.78-5.71 (m, 1H), 5.45 (br s, 1H), 5.17 (t, J=3.5 Hz, 2H), 5.03 (br s, 1H), 4.59 (br d, J=9.3 Hz, 1H), 4.54-4.45 (m, 2H), 4.37-4.25 (m, 2H), 4.23-4.14 (m, 1H), 4.08 (br d, J=3.3 Hz, 1H), 4.03 (br t, J=6.2 Hz, 2H), 3.67-3.58 (m, 2H), 3.30 (br s, 2H), 2.99-2.90 (m, 2H), 2.63 (br d, J=4.5 Hz, 1H), 2.59 (br d, J=4.5 Hz, 1H), 2.45 (s, 4H), 2.40 (br d, J=1.0 Hz, 1H), 2.37-2.30 (m, 3H), 2.25-2.19 (m, 1H), 2.12-2.05 (m, 1H), 1.95-1.89 (m, 1H), 1.83 (br s, 2H), 1.79-1.71 (m, 3H), 1.67-1.55 (m, 3H), 1.42-1.25 (m, 12H), 1.03 (br d, J=7.3 Hz, 3H), 0.96 (s, 9H), 0.83 (br d, J=6.9 Hz, 3H).
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (101.2 mg, 97.20 μmol, 33.22% yield, 98% purity) as a white solid. MS (M+H),=1020.7
1H NMR (400 MHz, DMSO-d6) δ=8.98 (s, 1H), 8.49 (br t, J=5.4 Hz, 1H), 7.40 (br d, J=7.8 Hz, 1H), 7.29 (br d, J=7.7 Hz, 1H), 7.05-6.91 (m, 3H), 5.90 (br d, J=9.3 Hz, 1H), 5.80-5.71 (m, 1H), 5.45 (br s, 1H), 5.27-5.10 (m, 2H), 5.04 (br d, J=1.2 Hz, 1H), 4.59 (br d, J=9.2 Hz, 1H), 4.55-4.44 (m, 2H), 4.38-4.25 (m, 2H), 4.23-4.15 (m, 1H), 4.12-4.00 (m, 3H), 3.70-3.57 (m, 2H), 3.01-2.87 (m, 2H), 2.64-2.57 (m, 2H), 2.45 (s, 3H), 2.41 (br s, 1H), 2.35 (br d, J=7.9 Hz, 3H), 2.22 (br d, J=10.1 Hz, 1H), 2.13-2.04 (m, 1H), 1.97-1.61 (in, 10H), 1.47-1.32 (m, 8H), 1.22 (br d, J=8.7 Hz, 8H), 1.04 (br d, J=6.8 Hz, 3H), 0.96 (br s, 9H), 0.83 (br d, J=6.6 Hz, 3H).
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (151.9 mg, 145.39 μmol, 37.70% yield, 98% purity) as a white solid. MS (M+H)+=1033.9
1H NMR (400 MHz, DMSO-d6) δ=8.98 (s, 1H), 8.48 (t, J=5.9 Hz, 1H), 7.40 (d, J=7.7 Hz, 1H), 7.29 (dd, J=2.7, 9.0 Hz, 1H), 7.00-6.92 (m, 3H), 5.90 (d, J=9.4 Hz, 1H), 5.75 (dd, J=5.9, 9.4 Hz, 1H), 5.45 (s, 1H), 5.17 (t, J=3.8 Hz, 2H), 5.04 (d, J=3.1 Hz, 1H), 4.59 (d, J=9.3 Hz, 1H), 4.54-4.45 (m, 2H), 4.35 (s, 1H), 4.32-4.25 (m, 1H), 4.22-4.15 (m, 1H), 4.10-4.07 (m, 1H), 4.03 (t, J=6.3 Hz, 2H), 3.67-3.58 (m, 2H), 3.01-2.87 (m, 2H), 2.68-2.62 (m, 1H), 2.58 (d, J=4.6 Hz, 1H), 2.45 (s, 3H), 2.41 (d, J=1.8 Hz, 1H), 2.38-2.32 (m, 3H), 2.22 (d, J=12.0 Hz, 1H), 2.12-2.05 (m, 1H), 1.96-1.88 (m, 1H), 1.85-1.81 (m, 2H), 1.79-1.62 (m, 6H), 1.61-1.55 (m, 1H), 1.46-1.41 (m, 2H), 1.41-1.37 (m, 2H), 1.37-1.32 (m, 4H), 1.29-1.22 (m, 10H), 1.06-1.00 (m, 3H), 0.96 (s, 9H), 0.83 (d, J=7.0 Hz, 3H)
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (113.1 mg, 103.37 μmol, 46.74% yield, 97% purity) as a white solid. MS (M+H)+=1061.7
1H NMR (400 MHz, DMSO-d6) δ 8.98 (s, 1H), 8.63-8.54 (m, 1H), 7.41 (d, J=7.7 Hz, 1H), 7.31-7.25 (m, 1H), 7.02-6.94 (m, 3H), 5.95-5.86 (m, 1H), 5.80-5.74 (m, 1H), 5.50-5.44 (m, 1H), 5.25-5.15 (m, 2H), 5.06-4.93 (m, 3H), 4.60 (d, J=9.3 Hz, 1H), 4.54-4.47 (m, 2H), 4.37-4.25 (m, 4H), 4.12-4.07 (m, 1H), 3.90-3.80 (m, 1H), 3.71-3.57 (m, 2H), 3.05-2.89 (m, 3H), 2.64-2.55 (m, 2H), 2.43 (s, 3H), 2.42-2.31 (m, 4H), 2.27-2.20 (m, 1H), 2.12-2.06 (m, 1H), 1.95-1.79 (m, 4H), 1.73-1.60 (m, 5H), 1.48-1.20 (m, 11H), 1.18-1.12 (m, 2H), 1.04 (d, J=7.3 Hz, 3H), 0.96 (s, 9H), 0.85 (d, J=6.9 Hz, 3H)
According to the above reaction scheme, in a manner similar to the other examples, obtained the titled compound (104.9 mg, 98.67 μmol, 37.68% yield, 97% purity) as white solid. MS (M+H)+=1031.7
1H NMR (400 MHz, DMSO-d6) δ=8.99 (s, 1H), 8.51 (t, J=6.0 Hz, 1H), 7.99 (s, 1H), 7.41 (d, J=7.8 Hz, 1H), 7.30 (d, J=9.4 Hz, 1H), 7.22-7.16 (m, 1H), 7.03 (s, 1H), 6.96 (d, J=7.7 Hz, 1H), 5.92 (d, J=9.8 Hz, 1H), 5.82-5.73 (m, 1H), 5.48 (s, 1H), 5.20-5.15 (m, 2H), 5.10-5.01 (m, 1H), 4.60 (d, J=8.8 Hz, 1H), 4.54-4.50 (m, 1H), 4.36-4.35 (m, 1H), 4.31-4.24 (m, 4H), 4.18-4.11 (m, 1H), 4.08-4.04 (m, 1H), 3.69-3.56 (m, 2H), 3.13 (t, J=6.1 Hz, 2H), 3.02-2.95 (m, 2H), 2.65-2.55 (m, 1H), 2.46 (s, 3H), 2.40-2.35 (m, 3H), 2.25 (d, J=11.0 Hz, 1H), 2.12-2.05 (m, 1H), 1.97-1.82 (m, 6H), 1.78 (d, J=13.4 Hz, 1H), 1.74-1.64 (m, 2H), 1.62-1.45 (m, 3H), 1.41-1.17 (m, 6H), 1.05 (d, J=7.2 Hz, 3H), 0.96 (s, 9H), 0.85 (d, J=6.8 Hz, 3H).
Comparative Compound 1 is a compound described by Formula 4 in WO 2019/109415 A1. It was synthesized according to the preparation method described in the document.
Comparative Compound 2 is a compound described by Formula 7 in WO 2019/109415 A1. It was synthesized according to the preparation method described in the document.
1. Culture of HepG2 Cell Line
HepG2, a human liver cancer cell line, was purchased from the Korea Cell Line Bank (KCLB), Seoul, Korea. The passage in cell culture was maintained at P105 to P110.
For cell counting, cell counter (Thermo Fisher Scientific Inc., Catalog #AMQAX1000) and 0.4% trypan blue solution were used.
For cell culture, DMEM (Gibco, Cat. No. 1195-65; Lot. No. 2085318), FBS (Gibco, Cat. No. 16000-044; Lot. No. 2097593), Penicillin/Streptomycin (PS) (Gibco, Cat. No. 15140-122; Lot. No. 2058855), 100 mm2 cell culture dish (SPL, Cat. No. 20100), 150 mm2 cell culture dish (SPL, Cat. No. 20150), 12-well culture plate (SPL, Cat. No. 30012), PBS pH 7.4 (Gibco, Cat. No. 10010-023; Lot. No. 2085080), TrypLE™ Express (Gibco, Cat. No. 12605-010; Lot No. 2070638), Counting Chamber (Hematocytometer) (Hirschmann, Cat. No. 8100204), and 0.4% Trypan Blue Solution (DYNEBIO, Cat. No. CBT3710; Lot. No. 20190723) were used.
2. Treatment of Compounds of the Present Invention
The compounds of the present invention were completely dissolved in DMSO and used in the experiment. 2×105 cells were seeded for each well of a 12-well plate (SPL), and the cells were cultured in the culture medium in a total volume of 2 ml. Each of the compounds of the present invention and comparative compounds was diluted three folds from the highest concentration of 3 μM to the lowest concentration in 10 points and treated for 18 hours.
Each of the compounds the present invention and comparative compounds was diluted three folds from the highest concentration of 3 μM to the lowest concentration of 100 nM in 10 points and was treated for 18 hours.
3. Western Blotting
For SDS-PAGE and Western blotting, 1×RIPA lysis buffer (Rockland, Cat. No. MB-030-0050; Lot no. 39751), 100× Protease Inhibitor Cocktail (Quartett, Cat. No. PPI1015; Lot no. PCO50038424), Pierce™ BCA protein assay kit (ThermoScientific, Cat. No. 23225; Lot no. UC276876), albumin standard (ThermoScientific, Cat. No. 23209; Lot no. UB269561), 4-15% Mini-PROTEAN TGX stain-free gel (Bio-rad, Cat. No. 4568085; Lot no. L007041B), 10× Tris/Glycine/SDS buffer (Bio-rad, Cat. No. 1610732; Lot no. 10000044375B); 10×TBS (Bio-rad, Cat. No. 1706435; Lot no. 1000045140B), 10% Tween 20 (Cat. No. 1610781; Lot no. L004152B), Color protein standard broad range (NEB, Cat. No. P7719S; Lot no. 10040349), 4× Laemmli sample buffer (Bio-rad, Cat. No. 1610747; Lot no. L004133B), P-mercaptoethanol (Sigma-Aldrich, Cat. No. M3148; Lot no. 60-24-2), SuperBlock™ T20 (TBS) blocking buffer (ThermoScientific, Cat. No. 37536; Lot no. UC282578), 1M sodium azide solution (Sigma-Aldrich, Cat. No. 08591-1 mL-F; Lot no. BCBV4989), α-Rabbit pAb to Ms IgG (abcam, Cat. No. ab97046; Lot no. GR3252115-1), a-Goat pAb to Rb IgG (CST, Cat. No. 7074S; Lot no. 28), a-GAPDH (abcam, Cat. No. ab8245), a-HMGCR (GeneTex, Cat. No. GTX54088; Lot no. 821903509), ECL™ Prime western blotting reagents (GE Healthcare, Cat. No. RPN2232; Lot no. 17001655), Ponceau S solution (Sigma-Aldrich, Cat. No. P7170; Lot no. SLBV4112), Difco™ Skim milk (BD, Cat. No. 232100; Lot no. 8346795), and iBlot® 2 NC Regular stacks (Invitrogen, Cat. No. IB23001; Lot no. 2NR110619-02), were used.
For cell harvesting, the cells were first separated from the plate using trypsin and then washed with the medium and PBS. Specifically, the medium was suctioned off and washed with 1 mL of PBS, and PBS was suctioned off. The cells were treated with 0.5 mL TrypLE™ Express at 37° C. for 7 minutes to separate the cells, and then 0.5 mL of complete medium was added to collect 1 mL of cell culture solution. Then, 1 mL of the cell collection solution was centrifuged at 8,000 rpm for 120 seconds, and the supernatant was removed. After washing with 0.2 mL of PBS, the PBS was removed.
For cell lysis, a lysis buffer was added and cell debris was removed to obtain a cell lysate. Specifically, the cells were treated with 70 μL of 1×RIPA buffer containing a protease inhibitor and incubated for 30 minutes on ice. Then, the cells were centrifuged at 4° C. and 15,000 rpm for 10 minutes to obtain a cell lysate.
Then, a standard curve was obtained using the BCA assay, and the protein mass in the lysate was quantified by substituting the curve. The mixture was incubated at 37° C. for 30 minutes using 20 μL of standard or sample solution, and 200 μL of BCA or Bradford solution, and measured at 562 nm absorbance. Samples were prepared by adding 4× sample buffer so that the quantity of protein added to each well was 15 μg.
Sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) was performed by setting a running time of 100 minutes at 120 V on a 4-15% Mini-PROTEAN TGX stain-free gel (15 well). Transferring was performed on iBlot® 2 NC Mini stacks at P0 mode of the dry blotting system. After staining using Ponceau S solution, blocking was performed for 1 hour with a blocking buffer (Thermo). After washing with 1×TBS containing 0.05% Tween20, the product was reacted at 4° C. for 16 hours with anti-HMGCR antibody (1:500) in skim milk or anti-GAPDH (abcam) antibody (1:20000) in 1×TBS-T as the primary antibody.
After washing three times for 10 minutes with 1×TBS containing 0.05% Tween20, the product was reacted at room temperature for 1 hour with anti-mouse antibody (abcam) (1:10000) or anti-rabbit antibody (CST) (1:5000) in 1×TBS-T as a secondary antibody. Then, after washing three times for 10 minutes with 1×TBS containing 0.05% Tween 20, the product was detected with an ECL working solution (1:1).
To analyze the results, an image analyzer (GE) was used to obtain final blot data. The ratio of HMG-CoA reductase to GAPDH for each sample was calculated using the ImageQuant TL (ver. 8.2.0) program. Each calculated value was entered into each cell of the Graphpad Prism 9 program, and the graph was automatically calculated to confirm the D50 value corresponding to the protein degradation ability (Grade A: DC50 is 50 nM or less; B: 500 nM or less; C: more than 500 nM).
4. Confirmation of HMGCR Degradability of the Compounds of the Present Invention
As a result of the experiment, DC50 values for the compounds of the compounds of the present invention were measured as shown in the following table.
As a result, it was confirmed exemplary compounds of the present invention had remarkably excellent HMGCR degradability in hepatocyte as compared to not only a negative control group (Compounds 1, 7, 13, 39, 45) that lack the E3 ubiquitin ligase ligand, but also the kwon PROTAC compounds which have atorvastatin moiety as protein target binder described in WO2019/109415 A1 (Comparative Examples 1 and 2) (see
The contents of all references, patents, pending patent applications and published patents, cited throughout this application are hereby expressly incorporated by reference.
Those skilled in the art will recognize, or be able to ascertain using no more than routine experimentation, many equivalents to the specific embodiments of the disclosure described herein. Such equivalents are intended to be encompassed by the following claims. It is understood that the detailed examples and embodiments described herein are given by way of example for illustrative purposes only, and are in no way considered to be limiting to the disclosure. Various modifications or changes in light thereof will be suggested to persons skilled in the art and are included within the spirit and purview of this application and are considered within the scope of the appended claims. For example, the relative quantities of the ingredients may be varied to optimize the desired effects, additional ingredients may be added, and/or similar ingredients may be substituted for one or more of the ingredients described. Additional advantageous features and functionalities associated with the systems, methods, and processes of the present disclosure will be apparent from the appended claims. Moreover, those skilled in the art will recognize, or be able to ascertain using no more than routine experimentation, many equivalents to the specific embodiments of the disclosure described herein. Such equivalents are intended to be encompassed by the following claims.
Number | Date | Country | Kind |
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10-2020-0037908 | Mar 2020 | KR | national |
Filing Document | Filing Date | Country | Kind |
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PCT/KR2021/003955 | 3/30/2021 | WO |