Insertional mutagenesis screen for otic genes in Xenopus

Information

  • Research Project
  • 6523511
  • ApplicationId
    6523511
  • Core Project Number
    R21DC005170
  • Full Project Number
    5R21DC005170-02
  • Serial Number
    5170
  • FOA Number
    RFA-DC-01-01
  • Sub Project Id
  • Project Start Date
    8/1/2001 - 22 years ago
  • Project End Date
    7/31/2004 - 19 years ago
  • Program Officer Name
    KELTY, MIRIAM F.
  • Budget Start Date
    8/1/2002 - 21 years ago
  • Budget End Date
    7/31/2003 - 20 years ago
  • Fiscal Year
    2002
  • Support Year
    2
  • Suffix
  • Award Notice Date
    7/30/2002 - 21 years ago

Insertional mutagenesis screen for otic genes in Xenopus

DESCRIPTION (provided by applicant): The broad goal of this research is to identify and mutate genes involved in otic development and function in Xenopus (frog). The well-characterized external embryological development of the frog allows simple access to specific developmental stages by rapid visual inspection. We will conduct an insertional mutagenesis screen in Xenopus using a gene-trap vector containing a splice acceptor (SA) sequence followed by a marker gene, green fluorescent protein (GFP). Since the marker gene lacks a promoter, it can only be transcribed and translated if it integrates properly into an exon or intron of an endogenous gene. Expression of the bright GFP following insertional mutagenesis is visible in living embryos. In addition, since the trapped (and prospectively mutated) gene is always marked by GFP, one can easily distinguish between embryos carrying the mutation from ones that do not. We will use visual inspection to screen for tadpoles with insertions of the GFP- transgene into genes expressed during otic development. We propose the following specific aims: (1) We will use insertional mutagenesis to generate stable GFP- expressing lines of the true diploid, Xenopus tropicalis, carrying transgenes expressed in the otic regions. These stable lines will be used for studying the mutant phenotype generated by the insertion. (2) We will clone and characterize otic genes into which the GFP transgene has inserted. (3) We will characterize the development of the tissue in which the GFP-transgene is expressed using fluorescence video microscopy in live heterozygotic embryos or in fixed tissues using immunohistochemistry (both light and EM). Results of these investigations will provide essential knowledge of the specific genes involved in otic development as well as mutant lines that can be used for future studies of the specific function of these genes in acoustic or vestibular functions.

IC Name
NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS
  • Activity
    R21
  • Administering IC
    DC
  • Application Type
    5
  • Direct Cost Amount
  • Indirect Cost Amount
  • Total Cost
    100000
  • Sub Project Total Cost
  • ARRA Funded
  • CFDA Code
    173
  • Ed Inst. Type
  • Funding ICs
    NIDCD:100000\
  • Funding Mechanism
  • Study Section
    ZDC1
  • Study Section Name
    Special Emphasis Panel
  • Organization Name
    NASA--AMES RESEARCH CENTER
  • Organization Department
  • Organization DUNS
    009231648
  • Organization City
    MOFFETT FIELD
  • Organization State
    CA
  • Organization Country
    UNITED STATES
  • Organization Zip Code
    940351000
  • Organization District
    UNITED STATES