Isolated human calcium/calmodulin (CaMk) dependent kinase proteins

Abstract

The present invention provides amino acid sequences of peptides that are encoded by genes within the human genome, the kinase peptides of the present invention. The present invention specifically provides isolated peptide and nucleic acid molecules, methods of identifying orthologs and paralogs of the kinase peptides, and methods of identifying modulators of the kinase peptides.

Description

FIELD OF THE INVENTION

The present invention is in the field of kinase proteins that are related to the calcium/calmodulin-dependent protein kinase subfamily, recombinant DNA molecules, and protein production. The present invention specifically provides novel peptides and proteins that effect protein phosphorylation and nucleic acid molecules encoding such peptide and protein molecules, all of which are useful in the development of human therapeutics and diagnostic compositions and methods.

BACKGROUND OF THE INVENTION

Protein Kinases

Kinases regulate many different cell proliferation, differentiation, and signaling processes by adding phosphate groups to proteins. Uncontrolled signaling has been implicated in a variety of disease conditions including inflammation, cancer, arteriosclerosis, and psoriasis. Reversible protein phosphorylation is the main strategy for controlling activities of eukaryotic cells. It is estimated that more than 1000 of the 10,000 proteins active in a typical mammalian cell are phosphorylated. The high energy phosphate, which drives activation, is generally transferred from adenosine triphosphate molecules (ATP) to a particular protein by protein kinases and removed from that protein by protein phosphatases. Phosphorylation occurs in response to extracellular signals (hormones, neurotransmitters, growth and differentiation factors, etc), cell cycle checkpoints, and environmental or nutritional stresses and is roughly analogous to turning on a molecular switch. When the switch goes on, the appropriate protein kinase activates a metabolic enzyme, regulatory protein, receptor, cytoskeletal protein, ion channel or pump, or transcription factor.

The kinases comprise the largest known protein group, a superfamily of enzymes with widely varied functions and specificities. They are usually named after their substrate, their regulatory molecules, or some aspect of a mutant phenotype. With regard to substrates, the protein kinases may be roughly divided into two groups; those that phosphorylate tyrosine residues (protein tyrosine kinases, PTK) and those that phosphorylate serine or threonine residues (serine/threonine kinases, STK). A few protein kinases have dual specificity and phosphorylate threonine and tyrosine residues. Almost all kinases contain a similar 250-300 amino acid catalytic domain. The N-terminal domain, which contains subdomains I-IV, generally folds into a two-lobed structure, which binds and orients the ATP (or GTP) donor molecule. The larger C terminal lobe, which contains subdomains VI A-XI, binds the protein substrate and carries out the transfer of the gamma phosphate from ATP to the hydroxyl group of a serine, threonine, or tyrosine residue. Subdomain V spans the two lobes.

The kinases may be categorized into families by the different amino acid sequences (generally between 5 and 100 residues) located on either side of, or inserted into loops of, the kinase domain. These added amino acid sequences allow the regulation of each kinase as it recognizes and interacts with its target protein. The primary structure of the kinase domains is conserved and can be further subdivided into 11 subdomains. Each of the 11 subdomains contains specific residues and motifs or patterns of amino acids that are characteristic of that subdomain and are highly conserved (Hardie, G. and Hanks, S. (1995) The Protein Kinase Facts Books , Vol 1:7-20 Academic Press, San Diego, Calif.).

The second messenger dependent protein kinases primarily mediate the effects of second messengers such as cyclic AMP (cAMP), cyclic GMP, inositol triphosphate, phosphatidylinositol, 3,4,5-triphosphate, cyclic-ADPribose, arachidonic acid, diacylglycerol and calcium-calmodulin. The cyclic-AMP dependent protein kinases (PKA) are important members of the STK family. Cyclic-AMP is an intracellular mediator of hormone action in all prokaryotic and animal cells that have been studied. Such hormone-induced cellular responses include thyroid hormone secretion, cortisol secretion, progesterone secretion, glycogen breakdown, bone resorption, and regulation of heart rate and force of heart muscle contraction. PKA is found in all animal cells and is thought to account for the effects of cyclic-AMP in most of these cells. Altered PKA expression is implicated in a variety of disorders and diseases including cancer, thyroid disorders, diabetes, atherosclerosis, and cardiovascular disease (Isselbacher, K. J. et al. (1994) Harrison's Principles of Internal Medicine , McGraw-Hill, New York, N.Y., pp. 416-431, 1887).

Calcium-calmodulin (CaM) dependent protein kinases are also members of STK family. Calmodulin is a calcium receptor that mediates many calcium regulated processes by binding to target proteins in response to the binding of calcium. The principle target protein in these processes is CaM dependent protein kinases. CaM-kinases are involved in regulation of smooth muscle contraction (MLC kinase), glycogen breakdown (phosphorylase kinase), and neurotransmission (CaM kinase I and CaM kinase II). CaM kinase I phosphorylates a variety of substrates including the neurotransmitter related proteins synapsin I and II, the gene transcription regulator, CREB, and the cystic fibrosis conductance regulator protein, CFTR (Haribabu, B. et al. (1995) EMBO Journal 14:3679-86). CaM II kinase also phosphorylates synapsin at different sites, and controls the synthesis of catecholamines in the brain through phosphorylation and activation of tyrosine hydroxylase. Many of the CaM kinases are activated by phosphorylation in addition to binding to CaM. The kinase may autophosphorylate itself, or be phosphorylated by another kinase as part of a “kinase cascade”.

Another ligand-activated protein kinase is 5′-AMP-activated protein kinase (AMPK) (Gao, G. et al. (1996) J. Biol. Chem. 15:8675-81). Mammalian AMPK is a regulator of fatty acid and sterol synthesis through phosphorylation of the enzymes acetyl-CoA carboxylase and hydroxymethylglutaryl-CoA reductase and mediates responses of these pathways to cellular stresses such as heat shock and depletion of glucose and ATP. AMPK is a heterotrimeric complex comprised of a catalytic alpha subunit and two non-catalytic beta and gamma subunits that are believed to regulate the activity of the alpha subunit. Subunits of AMPK have a much wider distribution in non-lipogenic tissues such as brain, heart, spleen, and lung than expected. This distribution suggests that its role may extend beyond regulation of lipid metabolism alone.

The mitogen-activated protein kinases (MAP) are also members of the STK family. MAP kinases also regulate intracellular signaling pathways. They mediate signal transduction from the cell surface to the nucleus via phosphorylation cascades. Several subgroups have been identified, and each manifests different substrate specificities and responds to distinct extracellular stimuli (Egan, S. E. and Weinberg, R. A. (1993) Nature 365:781-783). MAP kinase signaling pathways are present in mammalian cells as well as in yeast. The extracellular stimuli that activate mammalian pathways include epidermal growth factor (EGF), ultraviolet light, hyperosmolar medium, heat shock, endotoxic lipopolysaccharide (LPS), and pro-inflammatory cytokines such as tumor necrosis factor (TNF) and interleukin-1 (IL-1).

PRK (proliferation-related kinase) is a serum/cytokine inducible STK that is involved in regulation of the cell cycle and cell proliferation in human megakaroytic cells (Li, B. et al. (1996) J. Biol. Chem. 271:19402-8). PRK is related to the polo (derived from humans polo gene) family of STKs implicated in cell division. PRK is downregulated in lung tumor tissue and may be a proto-oncogene whose deregulated expression in normal tissue leads to oncogenic transformation. Altered MAP kinase expression is implicated in a variety of disease conditions including cancer, inflammation, immune disorders, and disorders affecting growth and development.

The cyclin-dependent protein kinases (CDKs) are another group of STKs that control the progression of cells through the cell cycle. Cyclins are small regulatory proteins that act by binding to and activating CDKs that then trigger various phases of the cell cycle by phosphorylating and activating selected proteins involved in the mitotic process. CDKs are unique in that they require multiple inputs to become activated. In addition to the binding of cyclin, CDK activation requires the phosphorylation of a specific threonine residue and the dephosphorylation of a specific tyrosine residue.

Protein tyrosine kinases, PTKs, specifically phosphorylate tyrosine residues on their target proteins and may be divided into transmembrane, receptor PTKs and nontransmembrane, non-receptor PTKs. Transmembrane protein-tyrosine kinases are receptors for most growth factors. Binding of growth factor to the receptor activates the transfer of a phosphate group from ATP to selected tyrosine side chains of the receptor and other specific proteins. Growth factors (GF) associated with receptor PTKs include; epidermal GF, platelet-derived GF, fibroblast GF, hepatocyte GF, insulin and insulin-like GFs, nerve GF, vascular endothelial GF, and macrophage colony stimulating factor.

Non-receptor PTKs lack transmembrane regions and, instead, form complexes with the intracellular regions of cell surface receptors. Such receptors that function through non-receptor PTKs include those for cytokines, hormones (growth hormone and prolactin) and antigen-specific receptors on T and B lymphocytes.

Many of these PTKs were first identified as the products of mutant oncogenes in cancer cells where their activation was no longer subject to normal cellular controls. In fact, about one third of the known oncogenes encode PTKs, and it is well known that cellular transformation (oncogenesis) is often accompanied by increased tyrosine phosphorylation activity (Carbonneau H and Tonks N K (1992) Annu. Rev. Cell. Biol. 8:463-93). Regulation of PTK activity may therefore be an important strategy in controlling some types of cancer.

Calcium/Calmodulin-Dependent Protein Kinases

The novel human protein, and encoding gene, provided by the present invention is related to the family of calcium/calmodulin-dependent protein kinases, which are serine/threonine kinases. The protein of the present invention shows a particularly high degree of similarity to calcium/calmodulin-dependent protein kinase II (CaM II). CaM II is comprised of alpha, beta, gamma, and delta subunits. Each subunit is encoded by a separate gene and alternatively splice forms of each subunit have been found (Breen et al., Biochem. Biophys. Res. Commun. 236 (2), 473-478 (1997)). CaM II exerts important effects on hormones and neurotransmitters that utilize calcium as a second messenger. Beta-cell CaM II activity is associated with insulin secretion, and multiple isoforms of CaM II are expressed in human islets of Langerhans (Breen et al., Biochem. Biophys. Res. Commun. 236 (2), 473-478 (1997)). It has been suggested that CaM II controls activation-induced cellular differentiation, and is important for imparting antigen-dependent memory to T cells (Bui et al., Cell 100: 457-467, 2000). For a further review of CaM II, see Li et al., Cytogenet. Cell Genet. 66: 113-116, 1994.

Kinase proteins, particularly members of the calcium/calmodulin-dependent protein kinase subfamily, are a major target for drug action and development. Accordingly, it is valuable to the field of pharmaceutical development to identify and characterize previously unknown members of this subfamily of kinase proteins. The present invention advances the state of the art by providing previously unidentified human kinase proteins that have homology to members of the calcium/calmodulin-dependent protein kinase subfamily.

SUMMARY OF THE INVENTION

The present invention is based in part on the identification of amino acid sequences of human kinase peptides and proteins that are related to the calcium/calmodulin-dependent protein kinase subfamily, as well as allelic variants and other mammalian orthologs thereof. These unique peptide sequences, and nucleic acid sequences that encode these peptides, can be used as models for the development of human therapeutic targets, aid in the identification of therapeutic proteins, and serve as targets for the development of human therapeutic agents that modulate kinase activity in cells and tissues that express the kinase. Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain.

DESCRIPTION OF THE FIGURE SHEETS

FIG. 1 provides the nucleotide sequence of a cDNA molecule that encodes the kinase protein of the present invention. (SEQ ID NO:1) In addition, structure and functional information is provided, such as ATG start, stop and tissue distribution, where available, that allows one to readily determine specific uses of inventions based on this molecular sequence. Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain.

FIG. 2 provides the predicted amino acid sequence of the kinase of the present invention. (SEQ ID NO:2) In addition structure and functional information such as protein family, function, and modification sites is provided where available, allowing one to readily determine specific uses of inventions based on this molecular sequence.

FIG. 3 provides genomic sequences that span the gene encoding the kinase protein of the present invention. (SEQ ID NO:3) In addition structure and functional information, such as intron/exon structure, promoter location, etc., is provided where available, allowing one to readily determine specific uses of inventions based on this molecular sequence. As illustrated in FIG. 3 , SNPs were identified at 16 different nucleotide positions.

DETAILED DESCRIPTION OF THE INVENTION

General Description

The present invention is based on the sequencing of the human genome. During the sequencing and assembly of the human genome, analysis of the sequence information revealed previously unidentified fragments of the human genome that encode peptides that share structural and/or sequence homology to protein/peptide/domains identified and characterized within the art as being a kinase protein or part of a kinase protein and are related to the calcium/calmodulin-dependent protein kinase subfamily. Utilizing these sequences, additional genomic sequences were assembled and transcript and/or cDNA sequences were isolated and characterized. Based on this analysis, the present invention provides amino acid sequences of human kinase peptides and proteins that are related to the calcium/calmodulin-dependent protein kinase subfamily, nucleic acid sequences in the form of transcript sequences, cDNA sequences and/or genomic sequences that encode these kinase peptides and proteins, nucleic acid variation (allelic information), tissue distribution of expression, and information about the closest art known protein/peptide/domain that has structural or sequence homology to the kinase of the present invention.

In addition to being previously unknown, the peptides that are provided in the present invention are selected based on their ability to be used for the development of commercially important products and services. Specifically, the present peptides are selected based on homology and/or structural relatedness to known kinase proteins of the calcium/calmodulin-dependent protein kinase subfamily and the expression pattern observed. Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain. The art has clearly established the commercial importance of members of this family of proteins and proteins that have expression patterns similar to that of the present gene. Some of the more specific features of the peptides of the present invention, and the uses thereof, are described herein, particularly in the Background of the Invention and in the annotation provided in the Figures, and/or are known within the art for each of the known calcium/calmodulin-dependent protein kinase family or subfamily of kinase proteins.

Specific Embodiments

Peptide Molecules

The present invention provides nucleic acid sequences that encode protein molecules that have been identified as being members of the kinase family of proteins and are related to the calcium/calmodulin-dependent protein kinase subfamily (protein sequences are provided in FIG. 2 , transcript/cDNA sequences are provided in FIG. 1 and genomic sequences are provided in FIG. 3 ). The peptide sequences provided in FIG. 2 , as well as the obvious variants described herein, particularly allelic variants as identified herein and using the information in FIG. 3 , will be referred herein as the kinase peptides of the present invention, kinase peptides, or peptides/proteins of the present invention.

The present invention provides isolated peptide and protein molecules that consist of, consist essentially of, or comprise the amino acid sequences of the kinase peptides disclosed in the FIG. 2 , (encoded by the nucleic acid molecule shown in FIG. 1 , transcript/cDNA or FIG. 3 , genomic sequence), as well as all obvious variants of these peptides that are within the art to make and use. Some of these variants are described in detail below.

As used herein, a peptide is said to be “isolated” or “purified” when it is substantially free of cellular material or free of chemical precursors or other chemicals. The peptides of the present invention can be purified to homogeneity or other degrees of purity. The level of purification will be based on the intended use. The critical feature is that the preparation allows for the desired function of the peptide, even if in the presence of considerable amounts of other components (the features of an isolated nucleic acid molecule is discussed below).

In some uses, “substantially free of cellular material” includes preparations of the peptide having less than about 30% (by dry weight) other proteins (i.e., contaminating protein), less than about 20% other proteins, less than about 10% other proteins, or less than about 5% other proteins. When the peptide is recombinantly produced, it can also be substantially free of culture medium, i.e., culture medium represents less than about 20% of the volume of the protein preparation.

The language “substantially free of chemical precursors or other chemicals” includes preparations of the peptide in which it is separated from chemical precursors or other chemicals that are involved in its synthesis. In one embodiment, the language “substantially free of chemical precursors or other chemicals” includes preparations of the kinase peptide having less than about 30% (by dry weight) chemical precursors or other chemicals, less than about 20% chemical precursors or other chemicals, less than about 10% chemical precursors or other chemicals, or less than about 5% chemical precursors or other chemicals.

The isolated kinase peptide can be purified from cells that naturally express it, purified from cells that have been altered to express it (recombinant), or synthesized using known protein synthesis methods. Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain. For example, a nucleic acid molecule encoding the kinase peptide is cloned into an expression vector, the expression vector introduced into a host cell and the protein expressed in the host cell. The protein can then be isolated from the cells by an appropriate purification scheme using standard protein purification techniques. Many of these techniques are described in detail below.

Accordingly, the present invention provides proteins that consist of the amino acid sequences provided in FIG. 2 (SEQ ID NO:2), for example, proteins encoded by the transcript/cDNA nucleic acid sequences shown in FIG. 1 (SEQ ID NO: 1) and the genomic sequences provided in FIG. 3 (SEQ ID NO:3). The amino acid sequence of such a protein is provided in FIG. 2. A protein consists of an amino acid sequence when the amino acid sequence is the final amino acid sequence of the protein.

The present invention further provides proteins that consist essentially of the amino acid sequences provided in FIG. 2 (SEQ ID NO:2), for example, proteins encoded by the transcript/cDNA nucleic acid sequences shown in FIG. 1 (SEQ ID NO:1) and the genomic sequences provided in FIG. 3 (SEQ ID NO:3). A protein consists essentially of an amino acid sequence when such an amino acid sequence is present with only a few additional amino acid residues, for example from about 1 to about 100 or so additional residues, typically from 1 to about 20 additional residues in the final protein.

The present invention further provides proteins that comprise the amino acid sequences provided in FIG. 2 (SEQ ID NO:2), for example, proteins encoded by the transcript/cDNA nucleic acid sequences shown in FIG. 1 (SEQ ID NO: 1) and the genomic sequences provided in FIG. 3 (SEQ ID NO:3). A protein comprises an amino acid sequence when the amino acid sequence is at least part of the final amino acid sequence of the protein. In such a fashion, the protein can be only the peptide or have additional amino acid molecules, such as amino acid residues (contiguous encoded sequence) that are naturally associated with it or heterologous amino acid residues/peptide sequences. Such a protein can have a few additional amino acid residues or can comprise several hundred or more additional amino acids. The preferred classes of proteins that are comprised of the kinase peptides of the present invention are the naturally occurring mature proteins. A brief description of how various types of these proteins can be made/isolated is provided below.

The kinase peptides of the present invention can be attached to heterologous sequences to form chimeric or fusion proteins. Such chimeric and fusion proteins comprise a kinase peptide operatively linked to a heterologous protein having an amino acid sequence not substantially homologous to the kinase peptide. “Operatively linked” indicates that the kinase peptide and the heterologous protein are fused in-frame. The heterologous protein can be fused to the N-terminus or C-terminus of the kinase peptide.

In some uses, the fusion protein does not affect the activity of the kinase peptide per se. For example, the fusion protein can include, but is not limited to, enzymatic fusion proteins, for example beta-galactosidase fusions, yeast two-hybrid GAL fusions, poly-His fusions, MYC-tagged, HI-tagged and Ig fusions. Such fusion proteins, particularly poly-His fusions, can facilitate the purification of recombinant kinase peptide. In certain host cells (e.g., mammalian host cells), expression and/or secretion of a protein can be increased by using a heterologous signal sequence.

A chimeric or fusion protein can be produced by standard recombinant DNA techniques. For example, DNA fragments coding for the different protein sequences are ligated together in-frame in accordance with conventional techniques. In another embodiment, the fusion gene can be synthesized by conventional techniques including automated DNA synthesizers. Alternatively, PCR amplification of gene fragments can be carried out using anchor primers which give rise to complementary overhangs between two consecutive gene fragments which can subsequently be annealed and re-amplified to generate a chimeric gene sequence (see Ausubel et al., Current Protocols in Molecular Biology, 1992). Moreover, many expression vectors are commercially available that already encode a fusion moiety (e.g., a GST protein). A kinase peptide-encoding nucleic acid can be cloned into such an expression vector such that the fusion moiety is linked in-frame to the kinase peptide.

As mentioned above, the present invention also provides and enables obvious variants of the amino acid sequence of the proteins of the present invention, such as naturally occurring mature forms of the peptide, allelic/sequence variants of the peptides, non-naturally occurring recombinantly derived variants of the peptides, and orthologs and paralogs of the peptides. Such variants can readily be generated using art-known techniques in the fields of recombinant nucleic acid technology and protein biochemistry. It is understood, however, that variants exclude any amino acid sequences disclosed prior to the invention.

Such variants can readily be identified/made using molecular techniques and the sequence information disclosed herein. Further, such variants can readily be distinguished from other peptides based on sequence and/or structural homology to the kinase peptides of the present invention. The degree of homology/identity present will be based primarily on whether the peptide is a functional variant or non-functional variant, the amount of divergence present in the paralog family and the evolutionary distance between the orthologs.

To determine the percent identity of two amino acid sequences or two nucleic acid sequences, the sequences are aligned for optimal comparison purposes (e.g., gaps can be introduced in one or both of a first and a second amino acid or nucleic acid sequence for optimal alignment and non-homologous sequences can be disregarded for comparison purposes). In a preferred embodiment, at least 30%, 40%, 50%, 60%, 70%, 80%, or 90% or more of the length of a reference sequence is aligned for comparison purposes. The amino acid residues or nucleotides at corresponding amino acid positions or nucleotide positions are then compared. When a position in the first sequence is occupied by the same amino acid residue or nucleotide as the corresponding position in the second sequence, then the molecules are identical at that position (as used herein amino acid or nucleic acid “identity” is equivalent to amino acid or nucleic acid “homology”). The percent identity between the two sequences is a function of the number of identical positions shared by the sequences, taking into account the number of gaps, and the length of each gap, which need to be introduced for optimal alignment of the two sequences.

The comparison of sequences and determination of percent identity and similarity between two sequences can be accomplished using a mathematical algorithm. ( Computational Molecular Biology , Lesk, A. M., ed., Oxford University Press, New York, 1988 ; Biocomputing: Informatics and Genome Projects , Smith, D. W., ed., Academic Press, New York, 1993 ; Computer Analysis of Sequence Data, Part 1, Griffin, A. M., and Griffin, H. G., eds., Humana Press, New Jersey, 1994 ; Sequence Analysis in Molecular Biology , von Heinje, G., Academic Press, 1987; and Sequence Analysis Primer , Gribskov, M. and Devereux, J., eds., M Stockton Press, New York, 1991). In a preferred embodiment, the percent identity between two amino acid sequences is determined using the Needleman and Wunsch ( J. Mol. Biol. ( 48):444-453 (1970)) algorithm which has been incorporated into the GAP program in the GCG software package (available at .gcg.com), using either a Blossom 62 matrix or a PAM250 matrix, and a gap weight of 16, 14, 12, 10, 8, 6, or 4 and a length weight of 1, 2, 3, 4, 5, or 6. In yet another preferred embodiment, the percent identity between two nucleotide sequences is determined using the GAP program in the GCG software package (Devereux, J., et al., Nucleic Acids Res. 12(1):387 (1984)) (available at .gcg.com), using a NWSgapdna.CMP matrix and a gap weight of 40, 50, 60, 70, or 80 and a length weight of 1, 2, 3, 4, 5, or 6. In another embodiment, the percent identity between two amino acid or nucleotide sequences is determined using the algorithm of E. Myers and W. Miller ( CABIOS, 4:11-17 (1989)) which has been incorporated into the ALIGN program (version 2.0), using a PAM120 weight residue table, a gap length penalty of 12 and a gap penalty of 4.

The nucleic acid and protein sequences of the present invention can further be used as a “query sequence” to perform a search against sequence databases to, for example, identify other family members or related sequences. Such searches can be performed using the NBLAST and XBLAST programs (version 2.0) of Altschul, et al. ( J. Mol. Biol. 215:403-10 (1990)). BLAST nucleotide searches can be performed with the NBLAST program, score=100, wordlength=12 to obtain nucleotide sequences homologous to the nucleic acid molecules of the invention. BLAST protein searches can be performed with the XBLAST program, score=50, wordlength=3 to obtain amino acid sequences homologous to the proteins of the invention. To obtain gapped alignments for comparison purposes, Gapped BLAST can be utilized as described in Altschul et al. ( Nucleic Acids Res. 25(17):3389-3402 (1997)). When utilizing BLAST and gapped BLAST programs, the default parameters of the respective programs (e.g., XBLAST and NBLAST) can be used.

Full-length pre-processed forms, as well as mature processed forms, of proteins that comprise one of the peptides of the present invention can readily be identified as having complete sequence identity to one of the kinase peptides of the present invention as well as being encoded by the same genetic locus as the kinase peptide provided herein. The gene encoding the novel kinase protein of the present invention is located on a genome component that has been mapped to human chromosome 10 (as indicated in FIG. 3 ), which is supported by multiple lines of evidence, such as STS and BAC map data.

Allelic variants of a kinase peptide can readily be identified as being a human protein having a high degree (significant) of sequence homology/identity to at least a portion of the kinase peptide as well as being encoded by the same genetic locus as the kinase peptide provided herein. Genetic locus can readily be determined based on the genomic information provided in FIG. 3 , such as the genomic sequence mapped to the reference human. The gene encoding the novel kinase protein of the present invention is located on a genome component that has been mapped to human chromosome 10 (as indicated in FIG. 3 ), which is supported by multiple lines of evidence, such as STS and BAC map data. As used herein, two proteins (or a region of the proteins) have significant homology when the amino acid sequences are typically at least about 70-80%, 80-90%, and more typically at least about 90-95% or more homologous. A significantly homologous amino acid sequence, according to the present invention, will be encoded by a nucleic acid sequence that will hybridize to a kinase peptide encoding nucleic acid molecule under stringent conditions as more fully described below.

FIG. 3 provides information on SNPs that have been found in the gene encoding the kinase protein of the present invention. SNPs were identified at 16 different nucleotide positions. Some of these SNPs, which are located 5′ of the ORF and in introns, may affect control/regulatory elements.

Paralogs of a kinase peptide can readily be identified as having some degree of significant sequence homology/identity to at least a portion of the kinase peptide, as being encoded by a gene from humans, and as having similar activity or function. Two proteins will typically be considered paralogs when the amino acid sequences are typically at least about 60% or greater, and more typically at least about 70% or greater homology through a given region or domain. Such paralogs will be encoded by a nucleic acid sequence that will hybridize to a kinase peptide encoding nucleic acid molecule under moderate to stringent conditions as more fully described below.

Orthologs of a kinase peptide can readily be identified as having some degree of significant sequence homology/identity to at least a portion of the kinase peptide as well as being encoded by a gene from another organism. Preferred orthologs will be isolated from mammals, preferably primates, for the development of human therapeutic targets and agents. Such orthologs will be encoded by a nucleic acid sequence that will hybridize to a kinase peptide encoding nucleic acid molecule under moderate to stringent conditions, as more fully described below, depending on the degree of relatedness of the two organisms yielding the proteins.

Non-naturally occurring variants of the kinase peptides of the present invention can readily be generated using recombinant techniques. Such variants include, but are not limited to deletions, additions and substitutions in the amino acid sequence of the kinase peptide. For example, one class of substitutions are conserved amino acid substitution. Such substitutions are those that substitute a given amino acid in a kinase peptide by another amino acid of like characteristics. Typically seen as conservative substitutions are the replacements, one for another, among the aliphatic amino acids Ala, Val, Leu, and Ile; interchange of the hydroxyl residues Ser and Thr; exchange of the acidic residues Asp and Glu; substitution between the amide residues Asn and Gln; exchange of the basic residues Lys and Arg; and replacements among the aromatic residues Phe and Tyr. Guidance concerning which amino acid changes are likely to be phenotypically silent are found in Bowie et al., Science 247:1306-1310 (1990).

Variant kinase peptides can be fully functional or can lack function in one or more activities, e.g. ability to bind substrate, ability to phosphorylate substrate, ability to mediate signaling, etc. Fully functional variants typically contain only conservative variation or variation in non-critical residues or in non-critical regions. FIG. 2 provides the result of protein analysis and can be used to identify critical domains/regions. Functional variants can also contain substitution of similar amino acids that result in no change or an insignificant change in function. Alternatively, such substitutions may positively or negatively affect function to some degree.

Non-functional variants typically contain one or more non-conservative amino acid substitutions, deletions, insertions, inversions, or truncation or a substitution, insertion, inversion, or deletion in a critical residue or critical region.

Amino acids that are essential for function can be identified by methods known in the art, such as site-directed mutagenesis or alanine-scanning mutagenesis (Cunningham et al., Science 244:1081-1085 (1989)), particularly using the results-provided in FIG. 2 . The latter procedure introduces single alanine mutations at every residue in the molecule. The resulting mutant molecules are then tested for biological activity such as kinase activity or in assays such as an in vitro proliferative activity. Sites that are critical for binding partner/substrate binding can also be determined by structural analysis such as crystallization, nuclear magnetic resonance or photoaffinity labeling (Smith et al., J Mol. Biol. 224:899-904 (1992); de Vos et al. Science 255:306-312 (1992)).

The present invention further provides fragments of the kinase peptides, in addition to proteins and peptides that comprise and consist of such fragments, particularly those comprising the residues identified in FIG. 2 . The fragments to which the invention pertains, however, are not to be construed as encompassing fragments that may be disclosed publicly prior to the present invention.

As used herein, a fragment comprises at least 8, 10, 12, 14, 16, or more contiguous amino acid residues from a kinase peptide. Such fragments can be chosen based on the ability to retain one or more of the biological activities of the kinase peptide or could be chosen for the ability to perform a function, e.g. bind a substrate or act as an immunogen. Particularly important fragments are biologically active fragments, peptides that are, for example, about 8 or more amino acids in length. Such fragments will typically comprise a domain or motif of the kinase peptide, e.g., active site, a transmembrane domain or a substrate-binding domain. Further, possible fragments include, but are not limited to, domain or motif containing fragments, soluble peptide fragments, and fragments containing immunogenic structures. Predicted domains and functional sites are readily identifiable by computer programs well known and readily available to those of skill in the art (e.g., PROSITE analysis). The results of one such analysis are provided in FIG. 2 .

Polypeptides often contain amino acids other than the 20 amino acids commonly referred to as the 20 naturally occurring amino acids. Further, many amino acids, including the terminal amino acids, may be modified by natural processes, such as processing and other post-translational modifications, or by chemical modification techniques well known in the art. Common modifications that occur naturally in kinase peptides are described in basic texts, detailed monographs, and the research literature, and they are well known to those of skill in the art (some of these features are identified in FIG. 2 ).

Known modifications include, but are not limited to, acetylation, acylation, ADP-ribosylation, amidation, covalent attachment of flavin, covalent attachment of a heme moiety, covalent attachment of a nucleotide or nucleotide derivative, covalent attachment of a lipid or lipid derivative, covalent attachment of phosphotidylinositol, cross-linking, cyclization, disulfide bond formation, demethylation, formation of covalent crosslinks, formation of cystine, formation of pyroglutamate, formylation, gamma carboxylation, glycosylation, GPI anchor formation, hydroxylation, iodination, methylation, myristoylation, oxidation, proteolytic processing, phosphorylation, prenylation, racemization, selenoylation, sulfation, transfer-RNA mediated addition of amino acids to proteins such as arginylation, and ubiquitination.

Such modifications are well known to those of skill in the art and have been described in great detail in the scientific literature. Several particularly common modifications, glycosylation, lipid attachment, sulfation, gamma-carboxylation of glutamic acid residues, hydroxylation and ADP-ribosylation, for instance, are described in most basic texts, such as Proteins—Structure and Molecular Properties, 2nd Ed., T. E. Creighton, W. H. Freeman and Company, New York (1993). Many detailed reviews are available on this subject, such as by Wold, F., Posttranslational Covalent Modification of Proteins , B. C. Johnson, Ed., Academic Press, New York 1-12 (1983); Seifter et al. ( Meth. Enzymol. 182: 626-646 (1990)) and Rattan et al. ( Ann. N.Y. Acad. Sci. 663:48-62 (1992)).

Accordingly, the kinase peptides of the present invention also encompass derivatives or analogs in which a substituted amino acid residue is not one encoded by the genetic code, in which a substituent group is included, in which the mature kinase peptide is fused with another compound, such as a compound to increase the half-life of the kinase peptide (for example, polyethylene glycol), or in which the additional amino acids are fused to the mature kinase peptide, such as a leader or secretory sequence or a sequence for purification of the mature kinase peptide or a pro-protein sequence.

Protein/Peptide Uses

The proteins of the present invention can be used in substantial and specific assays related to the functional information provided in the Figures; to raise antibodies or to elicit another immune response; as a reagent (including the labeled reagent) in assays designed to quantitatively determine levels of the protein (or its binding partner or ligand) in biological fluids; and as markers for tissues in which the corresponding protein is preferentially expressed (either constitutively or at a particular stage of tissue differentiation or development or in a disease state). Where the protein binds or potentially binds to another protein or ligand (such as, for example, in a kinase-effector protein interaction or kinase-ligand interaction), the protein can be used to identify the binding partner/ligand so as to develop a system to identify inhibitors of the binding interaction. Any or all of these uses are capable of being developed into reagent grade or kit format for commercialization as commercial products.

Methods for performing the uses listed above are well known to those skilled in the art. References disclosing such methods include “Molecular Cloning: A Laboratory Manual”, 2d ed., Cold Spring Harbor Laboratory Press, Sambrook, J., E. F. Fritsch and T. Maniatis eds., 1989, and “Methods in Enzymology: Guide to Molecular Cloning Techniques”, Academic Press, Berger, S. L. and A. R. Kimmel eds., 1987.

The potential uses of the peptides of the present invention are based primarily on the source of the protein as well as the class/action of the protein. For example, kinases isolated from humans and their human/mammalian orthologs serve as targets for identifying agents for use m mammalian therapeutic applications, e.g. a human drug, particularly in modulating a biological or pathological response in a cell or tissue that expresses the kinase. Experimental data as provided in FIG. 1 indicates that the kinase proteins of the present invention are expressed in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), and duodenal adenocarcinoma (small intestine), as indicated by virtual northern blot analysis. In addition, PCR-based tissue screening panels indicate expression in fetal brain. A large percentage of pharmaceutical agents are being developed that modulate the activity of kinase proteins, particularly members of the calcium/calmodulin-dependent protein kinase subfamily (see Background of the Invention). The structural and functional information provided in the Background and Figures provide specific and substantial uses for the molecules of the present invention, particularly in combination with the expression information provided in FIG. 1 . Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain. Such uses can readily be determined using the information provided herein, that which is known in the art, and routine experimentation.

The proteins of the present invention (including variants and fragments that may have been disclosed prior to the present invention) are useful for biological assays related to kinases that are related to members of the calcium/calmodulin-dependent protein kinase subfamily. Such assays involve any of the known kinase functions or activities or properties useful for diagnosis and treatment of kinase-related conditions that are specific for the subfamily of kinases that the one of the present invention belongs to, particularly in cells and tissues that express the kinase. Experimental data as provided in FIG. 1 indicates that the kinase proteins of the present invention are expressed in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), and duodenal adenocarcinoma (small intestine), as indicated by virtual northern blot analysis. In addition, PCR-based tissue screening panels indicate expression in fetal brain.

The proteins of the present invention are also useful in drug screening assays, in cell-based or cell-free systems. Cell-based systems can be native, i.e., cells that normally express the kinase, as a biopsy or expanded in cell culture. Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain. In an alternate embodiment, cell-based assays involve recombinant host cells expressing the kinase protein.

The polypeptides can be used to identify compounds that modulate kinase activity of the protein in its natural state or an altered form that causes a specific disease or pathology associated with the kinase. Both the kinases of the present invention and appropriate variants and fragments can be used in high-throughput screens to assay candidate compounds for the ability to bind to the kinase. These compounds can be further screened against a functional kinase to determine the effect of the compound on the kinase activity. Further, these compounds can be tested in animal or invertebrate systems to determine activity/effectiveness. Compounds can be identified that activate (agonist) or inactivate (antagonist) the kinase to a desired degree.

Further, the proteins of the present invention can be used to screen a compound for the ability to stimulate or inhibit interaction between the kinase protein and a molecule that normally interacts with the kinase protein, e.g. a substrate or a component of the signal pathway that the kinase protein normally interacts (for example, another kinase). Such assays typically include the steps of combining the kinase protein with a candidate compound under conditions that allow the kinase protein, or fragment, to interact with the target molecule, and to detect the formation of a complex between the protein and the target or to detect the biochemical consequence of the interaction with the kinase protein and the target, such as any of the associated effects of signal transduction such as protein phosphorylation, cAMP turnover, and adenylate cyclase activation, etc.

Candidate compounds include, for example, 1) peptides such as soluble peptides, including Ig-tailed fusion peptides and members of random peptide libraries (see, e.g., Lam et al., Nature 354:82-84 (1991); Houghten et al., Nature 354:84-86 (1991)) and combinatorial chemistry-derived molecular libraries made of D- and/or L-configuration amino acids; 2) phosphopeptides (e.g., members of random and partially degenerate, directed phosphopeptide libraries, see, e.g., Songyang et al., Cell 72:767-778 (1993)); 3) antibodies (e.g., polyclonal, monoclonal, humanized, anti-idiotypic, chimeric, and single chain antibodies as well as Fab, F(ab′) 2 , Fab expression library fragments, and epitope-binding fragments of antibodies); and 4) small organic and inorganic molecules (e.g., molecules obtained from combinatorial and natural product libraries).

One candidate compound is a soluble fragment of the receptor that competes for substrate binding. Other candidate compounds include mutant kinases or appropriate fragments containing mutations that affect kinase function and thus compete for substrate. Accordingly, a fragment that competes for substrate, for example with a higher affinity, or a fragment that binds substrate but does not allow release, is encompassed by the invention.

The invention further includes other end point assays to identify compounds that modulate (stimulate or inhibit) kinase activity. The assays typically involve an assay of events in the signal transduction pathway that indicate kinase activity. Thus, the phosphorylation of a substrate, activation of a protein, a change in the expression of genes that are up- or down-regulated in response to the kinase protein dependent signal cascade can be assayed.

Any of the biological or biochemical functions mediated by the kinase can be used as an endpoint assay. These include all of the biochemical or biochemical/biological events described herein, in the references cited herein, incorporated by reference for these endpoint assay targets, and other functions known to those of ordinary skill in the art or that can be readily identified using the information provided in the Figures, particularly FIG. 2 . Specifically, a biological function of a cell or tissues that expresses the kinase can be assayed. Experimental data as provided in FIG. 1 indicates that the kinase proteins of the present invention are expressed in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), and duodenal adenocarcinoma (small intestine), as indicated by virtual northern blot analysis. In addition, PCR-based tissue screening panels indicate expression in fetal brain.

Binding and/or activating compounds can also be screened by using chimeric kinase proteins in which the amino terminal extracellular domain, or parts thereof, the entire transmembrane domain or subregions, such as any of the seven transmembrane segments or any of the intracellular or extracellular loops and the carboxy terminal intracellular domain, or parts thereof, can be replaced by heterologous domains or subregions. For example, a substrate-binding region can be used that interacts with a different substrate then that which is recognized by the native kinase. Accordingly, a different set of signal transduction components is available as an end-point assay for activation. This allows for assays to be performed in other than the specific host cell from which the kinase is derived.

The proteins of the present invention are also useful in competition binding assays in methods designed to discover compounds that interact with the kinase (e.g. binding partners and/or ligands). Thus, a compound is exposed to a kinase polypeptide under conditions that allow the compound to bind or to otherwise interact with the polypeptide. Soluble kinase polypeptide is also added to the mixture. If the test compound interacts with the soluble kinase polypeptide, it decreases the amount of complex formed or activity from the kinase target. This type of assay is particularly useful in cases in which compounds are sought that interact with specific regions of the kinase. Thus, the soluble polypeptide that competes with the target kinase region is designed to contain peptide sequences corresponding to the region of interest.

To perform cell free drug screening assays, it is sometimes desirable to immobilize either the kinase protein, or fragment, or its target molecule to facilitate separation of complexes from uncomplexed forms of one or both of the proteins, as well as to accommodate automation of the assay.

Techniques for immobilizing proteins on matrices can be used in the drug screening assays. In one embodiment, a fusion protein can be provided which adds a domain that allows the protein to be bound to a matrix. For example, glutathione-S-transferase fusion proteins can be adsorbed onto glutathione sepharose beads (Sigma Chemical, St. Louis, Mo.) or glutathione derivatized microtitre plates, which are then combined with the cell lysates (e.g., 35 S-labeled) and the candidate compound, and the mixture incubated under conditions conducive to complex formation (e.g., at physiological conditions for salt and pH). Following incubation, the beads are washed to remove any unbound label, and the matrix immobilized and radiolabel determined directly, or in the supernatant after the complexes are dissociated. Alternatively, the complexes can be dissociated from the matrix, separated by SDS-PAGE, and the level of kinase-binding protein found in the bead fraction quantitated from the gel using standard electrophoretic techniques. For example, either the polypeptide or its target molecule can be immobilized utilizing conjugation of biotin and streptavidin using techniques well known in the art. Alternatively, antibodies reactive with the protein but which do not interfere with binding of the protein to its target molecule can be derivatized to the wells of the plate, and the protein trapped in the wells by antibody conjugation. Preparations of a kinase-binding protein and a candidate compound are incubated in the kinase protein-presenting wells and the amount of complex trapped in the well can be quantitated. Methods for detecting such complexes, in addition to those described above for the GST-immobilized complexes, include immunodetection of complexes using antibodies reactive with the kinase protein target molecule, or which are reactive with kinase protein and compete with the target molecule, as well as enzyme-linked assays which rely on detecting an enzymatic activity associated with the target molecule.

Agents that modulate one of the kinases of the present invention can be identified using one or more of the above assays, alone or in combination. It is generally preferable to use a cell-based or cell free system first and then confirm activity in an animal or other model system. Such model systems are well known in the art and can readily be employed in this context.

Modulators of kinase protein activity identified according to these drug screening assays can be used to treat a subject with a disorder mediated by the kinase pathway, by treating cells or tissues that express the kinase. Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain. These methods of treatment include the steps of administering a modulator of kinase activity in a pharmaceutical composition to a subject in need of such treatment, the modulator being identified as described herein.

In yet another aspect of the invention, the kinase proteins can be used as “bait proteins” in a two-hybrid assay or three-hybrid assay (see, e.g., U.S. Pat. No. 5,283,317; Zervos et al. (1993) Cell 72:223-232; Madura et al. (1993) J. Biol. Chem. 268:12046-12054; Bartel et al. (1993) Biotechniques 14:920-924; Iwabuchi et al. (1993) Oncogene 8:1693-1696; and Brent WO94/10300), to identify other proteins, which bind to or interact with the kinase and are involved in kinase activity. Such kinase-binding proteins are also likely to be involved in the propagation of signals by the kinase proteins or kinase targets as, for example, downstream elements of a kinase-mediated signaling pathway. Alternatively, such kinase-binding proteins are likely to be kinase inhibitors.

The two-hybrid system is based on the modular nature of most transcription factors, which consist of separable DNA-binding and activation domains. Briefly, the assay utilizes two different DNA constructs. In one construct, the gene that codes for a kinase protein is fused to a gene encoding the DNA binding domain of a known transcription factor (e.g., GAL-4). In the other construct, a DNA sequence, from a library of DNA sequences, that encodes an unidentified protein (“prey” or “sample”) is fused to a gene that codes for the activation domain of the known transcription factor. If the “bait” and the “prey” proteins are able to interact, in vivo, forming a kinase-dependent complex, the DNA-binding and activation domains of the transcription factor are brought into close proximity. This proximity allows transcription of a reporter gene (e.g., LacZ) which is operably linked to a transcriptional regulatory site responsive to the transcription factor. Expression of the reporter gene can be detected and cell colonies containing the functional transcription factor can be isolated and used to obtain the cloned gene which encodes the protein which interacts with the kinase protein.

This invention further pertains to novel agents identified by the above-described screening assays. Accordingly, it is within the scope of this invention to further use an agent identified as described herein in an appropriate animal model. For example, an agent identified as described herein (e.g., a kinase-modulating agent, an antisense kinase nucleic acid molecule, a kinase-specific antibody, or a kinase-binding partner) can be used in an animal or other model to determine the efficacy, toxicity, or side effects of treatment with such an agent. Alternatively, an agent identified as described herein can be used in an animal or other model to determine the mechanism of action of such an agent. Furthermore, this invention pertains to uses of novel agents identified by the above-described screening assays for treatments as described herein.

The kinase proteins of the present invention are also useful to provide a target for diagnosing a disease or predisposition to disease mediated by the peptide. Accordingly, the invention provides methods for detecting the presence, or levels of, the protein (or encoding mRNA) in a cell, tissue, or organism. Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain. The method involves contacting a biological sample with a compound capable of interacting with the kinase protein such that the interaction can be detected. Such an assay can be provided in a single detection format or a multi-detection format such as an antibody chip array.

One agent for detecting a protein in a sample is an antibody capable of selectively binding to protein. A biological sample includes tissues, cells and biological fluids isolated from a subject, as well as tissues, cells and fluids present within a subject.

The peptides of the present invention also provide targets for diagnosing active protein activity, disease, or predisposition to disease, in a patient having a variant peptide, particularly activities and conditions that are known for other members of the family of proteins to which the present one belongs. Thus, the peptide can be isolated from a biological sample and assayed for the presence of a genetic mutation that results in aberrant peptide. This includes amino acid substitution, deletion, insertion, rearrangement, (as the result of aberrant splicing events), and inappropriate post-translational modification. Analytic methods include altered electrophoretic mobility, altered tryptic peptide digest, altered kinase activity in cell-based or cell-free assay, alteration in substrate or antibody-binding pattern, altered isoelectric point, direct amino acid sequencing, and any other of the known assay techniques useful for detecting mutations in a protein. Such an assay can be provided in a single detection format or a multi-detection format such as an antibody chip array.

In vitro techniques for detection of peptide include enzyme linked immunosorbent assays (ELISAs), Western blots, immunoprecipitations and immunofluorescence using a detection reagent, such as an antibody or protein binding agent. Alternatively, the peptide can be detected in vivo in a subject by introducing into the subject a labeled anti-peptide antibody or other types of detection agent. For example, the antibody can be labeled with a radioactive marker whose presence and location in a subject can be detected by standard imaging techniques. Particularly useful are methods that detect the allelic variant of a peptide expressed in a subject and methods which detect fragments of a peptide in a sample.

The peptides are also useful in pharmacogenomic analysis. Pharmacogenomics deal with clinically significant hereditary variations in the response to drugs due to altered drug disposition and abnormal action in affected persons. See, e.g., Eichelbaum, M. ( Clin. Exp. Pharmacol. Physiol. 23(10-11):983-985 (1996)), and Linder, M. W. ( Clin. Chem. 43(2):254-266 (1997)). The clinical outcomes of these variations result in severe toxicity of therapeutic drugs in certain individuals or therapeutic failure of drugs in certain individuals as a result of individual variation in metabolism. Thus, the genotype of the individual can determine the way a therapeutic compound acts on the body or the way the body metabolizes the compound. Further, the activity of drug metabolizing enzymes effects both the intensity and duration of drug action. Thus, the pharmacogenomics of the individual permit the selection of effective compounds and effective dosages of such compounds for prophylactic or therapeutic treatment based on the individual's genotype. The discovery of genetic polymorphisms in some drug metabolizing enzymes has explained why some patients do not obtain the expected drug effects, show an exaggerated drug effect, or experience serious toxicity from standard drug dosages. Polymorphisms can be expressed in the phenotype of the extensive metabolizer and the phenotype of the poor metabolizer. Accordingly, genetic polymorphism may lead to allelic protein variants of the kinase protein in which one or more of the kinase functions in one population is different from those in another population. The peptides thus allow a target to ascertain a genetic predisposition that can affect treatment modality. Thus, in a ligand-based treatment, polymorphism may give rise to amino terminal extracellular domains and/or other substrate-binding regions that are more or less active in substrate binding, and kinase activation. Accordingly, substrate dosage would necessarily be modified to maximize the therapeutic effect within a given population containing a polymorphism. As an alternative to genotyping, specific polymorphic peptides could be identified.

The peptides are also useful for treating a disorder characterized by an absence of, inappropriate, or unwanted expression of the protein. Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain. Accordingly, methods for treatment include the use of the kinase protein or fragments.

Antibodies

The invention also provides antibodies that selectively bind to one of the peptides of the present invention, a protein comprising such a peptide, as well as variants and fragments thereof. As used herein, an antibody selectively binds a target peptide when it binds the target peptide and does not significantly bind to unrelated proteins. An antibody is still considered to selectively bind a peptide even if it also binds to other proteins that are not substantially homologous with the target peptide so long as such proteins share homology with a fragment or domain of the peptide target of the antibody. In this case, it would be understood that antibody binding to the peptide is still selective despite some degree of cross-reactivity.

As used herein, an antibody is defined in terms consistent with that recognized within the art: they are multi-subunit proteins produced by a mammalian organism in response to an antigen challenge. The antibodies of the present invention include polyclonal antibodies and monoclonal antibodies, as well as fragments of such antibodies, including, but not limited to, Fab or F(ab′)2, and Fv fragments.

Many methods are known for generating and/or identifying antibodies to a given target peptide. Several such methods are described by Harlow, Antibodies, Cold Spring Harbor Press, (1989).

In general, to generate antibodies, an isolated peptide is used as an immunogen and is administered to a mammalian organism, such as a rat, rabbit or mouse. The full-length protein, an antigenic peptide fragment or a fusion protein can be used. Particularly important fragments are those covering functional domains, such as the domains identified in FIG. 2 , and domain of sequence homology or divergence amongst the family, such as those that can readily be identified using protein alignment methods and as presented in the Figures.

Antibodies are preferably prepared from regions or discrete fragments of the kinase proteins. Antibodies can be prepared from any region of the peptide as described herein. However, preferred regions will include those involved in function/activity and/or kinase/binding partner interaction. FIG. 2 can be used to identify particularly important regions while sequence alignment can be used to identify conserved and unique sequence fragments.

An antigenic fragment will typically comprise at least 8 contiguous amino acid residues. The antigenic peptide can comprise, however, at least 10, 12, 14, 16 or more amino acid residues. Such fragments can be selected on a physical property, such as fragments correspond to regions that are located on the surface of the protein, e.g., hydrophilic regions or can be selected based on sequence uniqueness (see FIG. 2 ).

Detection on an antibody of the present invention can be facilitated by coupling (i.e., physically linking) the antibody to a detectable substance. Examples of detectable substances include various enzymes, prosthetic groups, fluorescent materials, luminescent materials, bioluminescent materials, and radioactive materials. Examples of suitable enzymes include horseradish peroxidase, alkaline phosphatase, β-galactosidase, or acetylcholinesterase; examples of suitable prosthetic group complexes include streptavidin/biotin and avidin/biotin; examples of suitable fluorescent materials include umbelliferone, fluorescein, fluorescein isothiocyanate, rhodamine, dichlorotriazinylamine fluorescein, dansyl chloride or phycoerythrin; an example of a luminescent material includes luminol; examples of bioluminescent materials include luciferase, luciferin, and aequorin, and examples of suitable radioactive material include 125 I, 131 I, 35 S or 3 H.

Antibody Uses

The antibodies can be used to isolate one of the proteins of the present invention by standard techniques, such as affinity chromatography or immunoprecipitation. The antibodies can facilitate the purification of the natural protein from cells and recombinantly produced protein expressed in host cells. In addition, such antibodies are useful to detect the presence of one of the proteins of the present invention in cells or tissues to determine the pattern of expression of the protein among various tissues in an organism and over the course of normal development. Experimental data as provided in FIG. 1 indicates that the kinase proteins of the present invention are expressed in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), and duodenal adenocarcinoma (small intestine), as indicated by virtual northern blot analysis. In addition, PCR-based tissue screening panels indicate expression in fetal brain. Further, such antibodies can be used to detect protein in situ, in vitro, or in a cell lysate or supernatant in order to evaluate the abundance and pattern of expression. Also, such antibodies can be used to assess abnormal tissue distribution or abnormal expression during development or progression of a biological condition. Antibody detection of circulating fragments of the full length protein can be used to identify turnover.

Further, the antibodies can be used to assess expression in disease states such as in active stages of the disease or in an individual with a predisposition toward disease related to the protein's function. When a disorder is caused by an inappropriate tissue distribution, developmental expression, level of expression of the protein, or expressed/processed form, the antibody can be prepared against the normal protein. Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain. If a disorder is characterized by a specific mutation in the protein, antibodies specific for this mutant protein can be used to assay for the presence of the specific mutant protein.

The antibodies can also be used to assess normal and aberrant subcellular localization of cells in the various tissues in an organism. Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain. The diagnostic uses can be applied, not only in genetic testing, but also in monitoring a treatment modality. Accordingly, where treatment is ultimately aimed at correcting expression level or the presence of aberrant sequence and aberrant tissue distribution or developmental expression, antibodies directed against the protein or relevant fragments can be used to monitor therapeutic efficacy.

Additionally, antibodies are useful in pharmacogenomic analysis. Thus, antibodies prepared against polymorphic proteins can be used to identify individuals that require modified treatment modalities. The antibodies are also useful as diagnostic tools as an immunological marker for aberrant protein analyzed by electrophoretic mobility, isoelectric point, tryptic peptide digest, and other physical assays known to those in the art.

The antibodies are also useful for tissue typing. Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain. Thus, where a specific protein has been correlated with expression in a specific tissue, antibodies that are specific for this protein can be used to identify a tissue type.

The antibodies are also useful for inhibiting protein function, for example, blocking the binding of the kinase peptide to a binding partner such as a substrate. These uses can also be applied in a therapeutic context in which treatment involves inhibiting the protein's function. An antibody can be used, for example, to block binding, thus modulating (agonizing or antagonizing) the peptides activity. Antibodies can be prepared against specific fragments containing sites required for function or against intact protein that is associated with a cell or cell membrane. See FIG. 2 for structural information relating to the proteins of the present invention.

The invention also encompasses kits for using antibodies to detect the presence of a protein in a biological sample. The kit can comprise antibodies such as a labeled or labelable antibody and a compound or agent for detecting protein in a biological sample; means for determining the amount of protein in the sample; means for comparing the amount of protein in the sample with a standard; and instructions for use. Such a kit can be supplied to detect a single protein or epitope or can be configured to detect one of a multitude of epitopes, such as in an antibody detection array. Arrays are described in detail below for nuleic acid arrays and similar methods have been developed for antibody arrays.

Nucleic Acid Molecules

The present invention further provides isolated nucleic acid molecules that encode a kinase peptide or protein of the present invention (cDNA, transcript and genomic sequence). Such nucleic acid molecules will consist of, consist essentially of, or comprise a nucleotide sequence that encodes one of the kinase peptides of the present invention, an allelic variant thereof, or an ortholog or paralog thereof.

As used herein, an “isolated” nucleic acid molecule is one that is separated from other nucleic acid present in the natural source of the nucleic acid. Preferably, an “isolated” nucleic acid is free of sequences which naturally flank the nucleic acid (i.e., sequences located at the 5′ and 3′ ends of the nucleic acid) in the genomic DNA of the organism from which the nucleic acid is derived. However, there can be some flanking nucleotide sequences, for example up to about 5 KB, 4 KB, 3 KB, 2 KB, or 1 KB or less, particularly contiguous peptide encoding sequences and peptide encoding sequences within the same gene but separated by introns in the genomic sequence. The important point is that the nucleic acid is isolated from remote and unimportant flanking sequences such that it can be subjected to the specific manipulations described herein such as recombinant expression, preparation of probes and primers, and other uses specific to the nucleic acid sequences.

Moreover, an “isolated” nucleic acid molecule, such as a transcript/cDNA molecule, can be substantially free of other cellular material, or culture medium when produced by recombinant techniques, or chemical precursors or other chemicals when chemically synthesized. However, the nucleic acid molecule can be fused to other coding or regulatory sequences and still be considered isolated.

For example, recombinant DNA molecules contained in a vector are considered isolated. Further examples of isolated DNA molecules include recombinant DNA molecules maintained in heterologous host cells or purified (partially or substantially) DNA molecules in solution. Isolated RNA molecules include in vivo or in vitro RNA transcripts of the isolated DNA molecules of the present invention. Isolated nucleic acid molecules according to the present invention further include such molecules produced synthetically.

Accordingly, the present invention provides nucleic acid molecules that consist of the nucleotide sequence shown in FIG. 1 or 3 (SEQ ID NO:1, transcript sequence and SEQ ID NO:3, genomic sequence), or any nucleic acid molecule that encodes the protein provided in FIG. 2 , SEQ ID NO:2. A nucleic acid molecule consists of a nucleotide sequence when the nucleotide sequence is the complete nucleotide sequence of the nucleic acid molecule.

The present invention further provides nucleic acid molecules that consist essentially of the nucleotide sequence shown in FIG. 1 or 3 (SEQ ID NO:1, transcript sequence and SEQ ID NO:3, genomic sequence), or any nucleic acid molecule that encodes the protein provided in FIG. 2 , SEQ ID NO:2. A nucleic acid molecule consists essentially of a nucleotide sequence when such a nucleotide sequence is present with only a few additional nucleic acid residues in the final nucleic acid molecule.

The present invention further provides nucleic acid molecules that comprise the nucleotide sequences shown in FIG. 1 or 3 (SEQ ID NO:1, transcript sequence and SEQ ID NO:3, genomic sequence), or any nucleic acid molecule that encodes the protein provided in FIG. 2 , SEQ ID NO:2. A nucleic acid molecule comprises a nucleotide sequence when the nucleotide sequence is at least part of the final nucleotide sequence of the nucleic acid molecule. In such a fashion, the nucleic acid molecule can be only the nucleotide sequence or have additional nucleic acid residues, such as nucleic acid residues that are naturally associated with it or heterologous nucleotide sequences. Such a nucleic acid molecule can have a few additional nucleotides or can comprises several hundred or more additional nucleotides. A brief description of how various types of these nucleic acid molecules can be readily made/isolated is provided below.

In FIGS. 1 and 3 , both coding and non-coding sequences are provided. Because of the source of the present invention, humans genomic sequence ( FIG. 3 ) and cDNA/transcript sequences (FIG. 1 ), the nucleic acid molecules in the Figures will contain genomic intronic sequences, 5′ and 3′ non-coding sequences, gene regulatory regions and non-coding intergenic sequences. In general such sequence features are either noted in FIGS. 1 and 3 or can readily be identified using computational tools known in the art. As discussed below, some of the non-coding regions, particularly gene regulatory elements such as promoters, are useful for a variety of purposes, e.g. control of heterologous gene expression, target for identifying gene activity modulating compounds, and are particularly claimed as fragments of the genomic sequence provided herein.

The isolated nucleic acid molecules can encode the mature protein plus additional amino or carboxyl-terminal amino acids, or amino acids interior to the mature peptide (when the mature form has more than one peptide chain, for instance). Such sequences may play a role in processing of a protein from precursor to a mature form, facilitate protein trafficking, prolong or shorten protein half-life or facilitate manipulation of a protein for assay or production, among other things. As generally is the case in situ, the additional amino acids may be processed away from the mature protein by cellular enzymes.

As mentioned above, the isolated nucleic acid molecules include, but are not limited to, the sequence encoding the kinase peptide alone, the sequence encoding the mature peptide and additional coding sequences, such as a leader or secretory sequence (e.g., a pre-pro or pro-protein sequence), the sequence encoding the mature peptide, with or without the additional coding sequences, plus additional non-coding sequences, for example introns and non-coding 5′ and 3′ sequences such as transcribed but non-translated sequences that play a role in transcription, mRNA processing (including splicing and polyadenylation signals), ribosome binding and stability of mRNA. In addition, the nucleic acid molecule may be fused to a marker sequence encoding, for example, a peptide that facilitates purification.

Isolated nucleic acid molecules can be in the form of RNA, such as mRNA, or in the form DNA, including cDNA and genomic DNA obtained by cloning or produced by chemical synthetic techniques or by a combination thereof The nucleic acid, especially DNA, can be double-stranded or single-stranded. Single-stranded nucleic acid can be the coding strand (sense strand) or the non-coding strand (anti-sense strand).

The invention further provides nucleic acid molecules that encode fragments of the peptides of the present invention as well as nucleic acid molecules that encode obvious variants of the kinase proteins of the present invention that are described above. Such nucleic acid molecules may be naturally occurring, such as allelic variants (same locus), paralogs (different locus), and orthologs (different organism), or may be constructed by recombinant DNA methods or by chemical synthesis. Such non-naturally occurring variants may be made by mutagenesis techniques, including those applied to nucleic acid molecules, cells, or organisms. Accordingly, as discussed above, the variants can contain nucleotide substitutions, deletions, inversions and insertions. Variation can occur in either or both the coding and non-coding regions. The variations can produce both conservative and non-conservative amino acid substitutions.

The present invention further provides non-coding fragments of the nucleic acid molecules provided in FIGS. 1 and 3 . Preferred non-coding fragments include, but are not limited to, promoter sequences, enhancer sequences, gene modulating sequences and gene termination sequences. Such fragments are useful in controlling heterologous gene expression and in developing screens to identify gene-modulating agents. A promoter can readily be identified as being 5′ to the ATG start site in the genomic sequence provided in FIG. 3 .

A fragment comprises a contiguous nucleotide sequence greater than 12 or more nucleotides. Further, a fragment could at least 30, 40, 50, 100, 250 or 500 nucleotides in length. The length of the fragment will be based on its intended use. For example, the fragment can encode epitope bearing regions of the peptide, or can be useful as DNA probes and primers. Such fragments can be isolated using the known nucleotide sequence to synthesize an oligonucleotide probe. A labeled probe can then be used to screen a cDNA library, genomic DNA library, or mRNA to isolate nucleic acid corresponding to the coding region. Further, primers can be used in PCR reactions to clone specific regions of gene.

A probe/primer typically comprises substantially a purified oligonucleotide or oligonucleotide pair. The oligonucleotide typically comprises a region of nucleotide sequence that hybridizes under stringent conditions to at least about 12, 20, 25, 40, 50 or more consecutive nucleotides.

Orthologs, homologs, and allelic variants can be identified using methods well known in the art. As described in the Peptide Section, these variants comprise a nucleotide sequence encoding a peptide that is typically 60-70%, 70-80%, 80-90%, and more typically at least about 90-95% or more homologous to the nucleotide sequence shown in the Figure sheets or a fragment of this sequence. Such nucleic acid molecules can readily be identified as being able to hybridize under moderate to stringent conditions, to the nucleotide sequence shown in the Figure sheets or a fragment of the sequence. Allelic variants can readily be determined by genetic locus of the encoding gene. The gene encoding the novel kinase protein of the present invention is located on a genome component that has been mapped to human chromosome 10 (as indicated in FIG. 3 ), which is supported by multiple lines of evidence, such as STS and BAC map data.

FIG. 3 provides information on SNPs that have been found in the gene encoding the kinase protein of the present invention. SNPs were identified at 16 different nucleotide positions. Some of these SNPs, which are located 5′ of the ORF and in introns, may affect control/regulatory elements.

As used herein, the term “hybridizes under stringent conditions” is intended to describe conditions for hybridization and washing under which nucleotide sequences encoding a peptide at least 60-70% homologous to each other typically remain hybridized to each other. The conditions can be such that sequences at least about 60%, at least about 70%, or at least about 80% or more homologous to each other typically remain hybridized to each other. Such stringent conditions are known to those skilled in the art and can be found in Current Protocols in Molecular Biology , John Wiley & Sons, N.Y. (1989), 6.3.1-6.3.6. One example of stringent hybridization conditions are hybridization in 6× sodium chloride/sodium citrate (SSC) at about 45 C., followed by one or more washes in 0.2× SSC, 0.1% SDS at 50-65 C. Examples of moderate to low stringency hybridization conditions are well known in the art.

Nucleic Acid Molecule Uses

The nucleic acid molecules of the present invention are useful for probes, primers, chemical intermediates, and in biological assays. The nucleic acid molecules are useful as a hybridization probe for messenger RNA, transcript/cDNA and genomic DNA to isolate full-length cDNA and genomic clones encoding the peptide described in FIG. 2 and to isolate cDNA and genomic clones that correspond to variants (alleles, orthologs, etc.) producing the same or related peptides shown in FIG. 2 . As illustrated in FIG. 3 , SNPs were identified at 16 different nucleotide positions.

The probe can correspond to any sequence along the entire length of the nucleic acid molecules provided in the Figures. Accordingly, it could be derived from 5′ noncoding regions, the coding region, and 3′ noncoding regions. However, as discussed, fragments are not to be construed as encompassing fragments disclosed prior to the present invention.

The nucleic acid molecules are also useful as primers for PCR to amplify any given region of a nucleic acid molecule and are useful to synthesize antisense molecules of desired length and sequence.

The nucleic acid molecules are also useful for constructing recombinant vectors. Such vectors include expression vectors that express a portion of, or all of, the peptide sequences. Vectors also include insertion vectors, used to integrate into another nucleic acid molecule sequence, such as into the cellular genome, to alter in situ expression of a gene and/or gene product. For example, an endogenous coding sequence can be replaced via homologous recombination with all or part of the coding region containing one or more specifically introduced mutations.

The nucleic acid molecules are also useful for expressing antigenic portions of the proteins.

The nucleic acid molecules are also useful as probes for determining the chromosomal positions of the nucleic acid molecules by means of in situ hybridization methods. The gene encoding the novel kinase protein of the present invention is located on a genome component that has been mapped to human chromosome 10 (as indicated in FIG. 3 ), which is supported by multiple lines of evidence, such as STS and BAC map data.

The nucleic acid molecules are also useful in making vectors containing the gene regulatory regions of the nucleic acid molecules of the present invention.

The nucleic acid molecules are also useful for designing ribozymes corresponding to all, or a part, of the mRNA produced from the nucleic acid molecules described herein.

The nucleic acid molecules are also useful for making vectors that express part, or all, of the peptides.

The nucleic acid molecules are also useful for constructing host cells expressing a part, or all, of the nucleic acid molecules and peptides.

The nucleic acid molecules are also useful for constructing transgenic animals expressing all, or a part, of the nucleic acid molecules and peptides.

The nucleic acid molecules are also useful as hybridization probes for determining the presence, level, form and distribution of nucleic acid expression. Experimental data as provided in FIG. 1 indicates that the kinase proteins of the present invention are expressed in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), and duodenal adenocarcinoma (small intestine), as indicated by virtual northern blot analysis. In addition, PCR-based tissue screening panels indicate expression in fetal brain. Accordingly, the probes can be used to detect the presence of, or to determine levels of, a specific nucleic acid molecule in cells, tissues, and in organisms. The nucleic acid whose level is determined can be DNA or RNA. Accordingly, probes corresponding to the peptides described herein can be used to assess expression and/or gene copy number in a given cell, tissue, or organism. These uses are relevant for diagnosis of disorders involving an increase or decrease in kinase protein expression relative to normal results.

In vitro techniques for detection of mRNA include Northern hybridizations and in situ hybridizations. In vitro techniques for detecting DNA includes Southern hybridizations and in situ hybridization.

Probes can be used as a part of a diagnostic test kit for identifying cells or tissues that express a kinase protein, such as by measuring a level of a kinase-encoding nucleic acid in a sample of cells from a subject e.g., mRNA or genomic DNA, or determining if a kinase gene has been mutated. Experimental data as provided in FIG. 1 indicates that the kinase proteins of the present invention are expressed in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), and duodenal adenocarcinoma (small intestine), as indicated by virtual northern blot analysis. In addition, PCR-based tissue screening panels indicate expression in fetal brain.

Nucleic acid expression assays are useful for drug screening to identify compounds that modulate kinase nucleic acid expression.

The invention thus provides a method for identifying a compound that can be used to treat a disorder associated with nucleic acid expression of the kinase gene, particularly biological and pathological processes that are mediated by the kinase in cells and tissues that express it. Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain. The method typically includes assaying the ability of the compound to modulate the expression of the kinase nucleic acid and thus identifying a compound that can be used to treat a disorder characterized by undesired kinase nucleic acid expression. The assays can be performed in cell-based and cell-free systems. Cell-based assays include cells naturally expressing the kinase nucleic acid or recombinant cells genetically engineered to express specific nucleic acid sequences.

The assay for kinase nucleic acid expression can involve direct assay of nucleic acid levels, such as mRNA levels, or on collateral compounds involved in the signal pathway. Further, the expression of genes that are up- or down-regulated in response to the kinase protein signal pathway can also be assayed. In this embodiment the regulatory regions of these genes can be operably linked to a reporter gene such as luciferase.

Thus, modulators of kinase gene expression can be identified in a method wherein a cell is contacted with a candidate compound and the expression of mRNA determined. The level of expression of kinase mRNA in the presence of the candidate compound is compared to the level of expression of kinase mRNA in the absence of the candidate compound. The candidate compound can then be identified as a modulator of nucleic acid expression based on this comparison and be used, for example to treat a disorder characterized by aberrant nucleic acid expression. When expression of mRNA is statistically significantly greater in the presence of the candidate compound than in its absence, the candidate compound is identified as a stimulator of nucleic acid expression. When nucleic acid expression is statistically significantly less in the presence of the candidate compound than in its absence, the candidate compound is identified as an inhibitor of nucleic acid expression.

The invention further provides methods of treatment, with the nucleic acid as a target, using a compound identified through drug screening as a gene modulator to modulate kinase nucleic acid expression in cells and tissues that express the kinase. Experimental data as provided in FIG. 1 indicates that the kinase proteins of the present invention are expressed in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), and duodenal adenocarcinoma (small intestine), as indicated by virtual northern blot analysis. In addition, PCR-based tissue screening panels indicate expression in fetal brain. Modulation includes both up-regulation (i.e. activation or agonization) or down-regulation (suppression or antagonization) or nucleic acid expression.

Alternatively, a modulator for kinase nucleic acid expression can be a small molecule or drug identified using the screening assays described herein as long as the drug or small molecule inhibits the kinase nucleic acid expression in the cells and tissues that express the protein. Experimental data as provided in FIG. 1 indicates expression in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), duodenal adenocarcinoma (small intestine), and fetal brain.

The nucleic acid molecules are also useful for monitoring the effectiveness of modulating compounds on the expression or activity of the kinase gene in clinical trials or in a treatment regimen. Thus, the gene expression pattern can serve as a barometer for the continuing effectiveness of treatment with the compound, particularly with compounds to which a patient can develop resistance. The gene expression pattern can also serve as a marker indicative of a physiological response of the affected cells to the compound. Accordingly, such monitoring would allow either increased administration of the compound or the administration of alternative compounds to which the patient has not become resistant. Similarly, if the level of nucleic acid expression falls below a desirable level, administration of the compound could be commensurately decreased.

The nucleic acid molecules are also useful in diagnostic assays for qualitative changes in kinase nucleic acid expression, and particularly in qualitative changes that lead to pathology. The nucleic acid molecules can be used to detect mutations in kinase genes and gene expression products such as mRNA. The nucleic acid molecules can be used as hybridization probes to detect naturally occurring genetic mutations in the kinase gene and thereby to determine whether a subject with the mutation is at risk for a disorder caused by the mutation. Mutations include deletion, addition, or substitution of one or more nucleotides in the gene, chromosomal rearrangement, such as inversion or transposition, modification of genomic DNA, such as aberrant methylation patterns or changes in gene copy number, such as amplification. Detection of a mutated form of the kinase gene associated with a dysfunction provides a diagnostic tool for an active disease or susceptibility to disease when the disease results from overexpression, underexpression, or altered expression of a kinase protein.

Individuals carrying mutations in the kinase gene can be detected at the nucleic acid level by a variety of techniques. FIG. 3 provides information on SNPs that have been found in the gene encoding the kinase protein of the present invention. SNPs were identified at 16 different nucleotide positions. Some of these SNPs, which are located 5′ of the ORF and in introns, may affect control/regulatory elements. The gene encoding the novel kinase protein of the present invention is located on a genome component that has been mapped to human chromosome 10 (as indicated in FIG. 3 ), which is supported by multiple lines of evidence, such as STS and BAC map data. Genomic DNA can be analyzed directly or can be amplified by using PCR prior to analysis. RNA or cDNA can be used in the same way. In some uses, detection of the mutation involves the use of a probe/primer in apolymerase chain reaction (PCR) (see, e.g. U.S. Pat. Nos. 4,683,195 and 4,683,202), such as anchor PCR or RACE PCR, or, alternatively, in a ligation chain reaction (LCR) (see, e.g., Landegran et al., Science 241:1077-1080 (1988); and Nakazawa et al., PNAS 91:360-364 (1994)), the latter of which can be particularly useful for detecting point mutations in the gene (see Abravaya et al., Nucleic Acids Res. 23:675-682 (1995)). This method can include the steps of collecting a sample of cells from a patient, isolating nucleic acid (e.g., genomic, mRNA or both) from the cells of the sample, contacting the nucleic acid sample with one or more primers which specifically hybridize to a gene under conditions such that hybridization and amplification of the gene (if present) occurs, and detecting the presence or absence of an amplification product, or detecting the size of the amplification product and comparing the length to a control sample. Deletions and insertions can be detected by a change in size of the amplified product compared to the normal genotype. Point mutations can be identified by hybridizing amplified DNA to normal RNA or antisense DNA sequences.

Alternatively, mutations in a kinase gene can be directly identified, for example, by alterations in restriction enzyme digestion patterns determined by gel electrophoresis.

Further, sequence-specific ribozymes (U.S. Pat. No. 5,498,531) can be used to score for the presence of specific mutations by development or loss of a ribozyme cleavage site. Perfectly matched sequences can be distinguished from mismatched sequences by nuclease cleavage digestion assays or by differences in melting temperature.

Sequence changes at specific locations can also be assessed by nuclease protection assays such as RNase and S1 protection or the chemical cleavage method. Furthermore, sequence differences between a mutant kinase gene and a wild-type gene can be determined by direct DNA sequencing. A variety of automated sequencing procedures can be utilized when performing the diagnostic assays (Naeve, C. W., (1995) Biotechniques 19:448), including sequencing by mass spectrometry (see, e.g., PCT International Publication No. WO 94/16101; Cohen et al., Adv. Chromatogr. 36:127-162 (1996); and Griffin et al., Appl. Biochem. Biotechnol. 38:147-159 (1993)).

Other methods for detecting mutations in the gene include methods in which protection from cleavage agents is used to detect mismatched bases in RNA/RNA or RNA/DNA duplexes (Myers et al., Science 230:1242 (1985)); Cotton et al., PNAS 85:4397 (1988); Saleeba et al., Meth. Enzymol. 217:286-295 (1992)), electrophoretic mobility of mutant and wild type nucleic acid is compared (Orita et al., PNAS 86:2766 (1989); Cotton et al., Mutat. Res. 285:125-144 (1993); and Hayashi et al., Genet. Anal. Tech. Appl. 9:73-79 (1992)), and movement of mutant or wild-type fragments in polyacrylamide gels containing a gradient of denaturant is assayed using denaturing gradient gel electrophoresis (Myers et al., Nature 313:495 (1985)). Examples of other techniques for detecting point mutations include selective oligonucleotide hybridization, selective amplification, and selective primer extension.

The nucleic acid molecules are also useful for testing an individual for a genotype that while not necessarily causing the disease, nevertheless affects the treatment modality. Thus, the nucleic acid molecules can be used to study the relationship between an individual's genotype and the individual's response to a compound used for treatment (pharmacogenomic relationship). Accordingly, the nucleic acid molecules described herein can be used to assess the mutation content of the kinase gene in an individual in order to select an appropriate compound or dosage regimen for treatment. FIG. 3 provides information on SNPs that have been found in the gene encoding the kinase protein of the present invention. SNPs were identified at 16 different nucleotide positions. Some of these SNPs, which are located 5′ of the ORF and in introns, may affect control/regulatory elements.

Thus nucleic acid molecules displaying genetic variations that affect treatment provide a diagnostic target that can be used to tailor treatment in an individual. Accordingly, the production of recombinant cells and animals containing these polymorphisms allow effective clinical design of treatment compounds and dosage regimens.

The nucleic acid molecules are thus useful as antisense constructs to control kinase gene expression in cells, tissues, and organisms. A DNA antisense nucleic acid molecule is designed to be complementary to a region of the gene involved in transcription, preventing transcription and hence production of kinase protein. An antisense RNA or DNA nucleic acid molecule would hybridize to the mRNA and thus block translation of mRNA into kinase protein.

Alternatively, a class of antisense molecules can be used to inactivate mRNA in order to decrease expression of kinase nucleic acid. Accordingly, these molecules can treat a disorder characterized by abnormal or undesired kinase nucleic acid expression. This technique involves cleavage by means of ribozymes containing nucleotide sequences complementary to one or more regions in the mRNA that attenuate the ability of the mRNA to be translated. Possible regions include coding regions and particularly coding regions corresponding to the catalytic and other functional activities of the kinase protein, such as substrate binding.

The nucleic acid molecules also provide vectors for gene therapy in patients containing cells that are aberrant in kinase gene expression. Thus, recombinant cells, which include the patient's cells that have been engineered ex vivo and returned to the patient, are introduced into an individual where the cells produce the desired kinase protein to treat the individual.

The invention also encompasses kits for detecting the presence of a kinase nucleic acid in a biological sample. Experimental data as provided in FIG. 1 indicates that the kinase proteins of the present invention are expressed in humans in the placenta, breast (including mammary adenocarcinoma), skin melanotic melanoma, ovary adenocarcinoma, uterus leiomyosarcoma, Burkitt's lymphoma (lymph), and duodenal adenocarcinoma (small intestine), as indicated by virtual northern blot analysis. In addition, PCR-based tissue screening panels indicate expression in fetal brain. For example, the kit can comprise reagents such as a labeled or labelable nucleic acid or agent capable of detecting kinase nucleic acid in a biological sample; means for determining the amount of kinase nucleic acid in the sample; and means for comparing the amount of kinase nucleic acid in the sample with a standard. The compound or agent can be packaged in a suitable container. The kit can further comprise instructions for using the kit to detect kinase protein mRNA or DNA.

Nucleic Acid Arrays

The present invention further provides nucleic acid detection kits, such as arrays or microarrays of nucleic acid molecules that are based on the sequence information provided in FIGS. 1 and 3 (SEQ ID NOS:1 and 3).

As used herein “Arrays” or “Microarrays” refers to an array of distinct polynucleotides or oligonucleotides synthesized on a substrate, such as paper, nylon or other type of membrane, filter, chip, glass slide, or any other suitable solid support. In one embodiment, the microarray is prepared and used according to the methods described in U.S. Pat. No. 5,837,832, Chee et al., PCT application WO95/11995 (Chee et al.), Lockhart, D. J. et al. (1996; Nat. Biotech. 14: 1675-1680) and Schena, M. et al. (1996; Proc. Natl. Acad. Sci. 93: 10614-10619), all of which are incorporated herein in their entirety by reference. In other embodiments, such arrays are produced by the methods described by Brown et al., U.S. Pat. No. 5,807,522.

The microarray or detection kit is preferably composed of a large number of unique, single-stranded nucleic acid sequences, usually either synthetic antisense oligonucleotides or fragments of cDNAs, fixed to a solid support. The oligonucleotides are preferably about 6-60 nucleotides in length, more preferably 15-30 nucleotides in length, and most preferably about 20-25 nucleotides in length. For a certain type of microarray or detection kit, it may be preferable to use oligonucleotides that are only 7-20 nucleotides in length. The microarray or detection kit may contain oligonucleotides that cover the known 5′, or 3′, sequence, sequential oligonucleotides which cover the full length sequence; or unique oligonucleotides selected from particular areas along the length of the sequence. Polynucleotides used in the microarray or detection kit may be oligonucleotides that are specific to a gene or genes of interest.

In order to produce oligonucleotides to a known sequence for a microarray or detection kit, the gene(s) of interest (or an ORF identified from the contigs of the present invention) is typically examined using a computer algorithm which starts at the 5′ or at the 3′ end of the nucleotide sequence. Typical algorithms will then identify oligomers of defined length that are unique to the gene, have a GC content within a range suitable for hybridization, and lack predicted secondary structure that may interfere with hybridization. In certain situations it may be appropriate to use pairs of oligonucleotides on a microarray or detection kit. The “pairs” will be identical, except for one nucleotide that preferably is located in the center of the sequence. The second oligonucleotide in the pair (mismatched by one) serves as a control. The number of oligonucleotide pairs may range from two to one million. The oligomers are synthesized at designated areas on a substrate using a light-directed chemical process. The substrate may be paper, nylon or other type of membrane, filter, chip, glass slide or any other suitable solid support.

In another aspect, an oligonucleotide may be synthesized on the surface of the substrate by using a chemical coupling procedure and an ink jet application apparatus, as described in PCT application WO95/251116 (Baldeschweiler et al.) which is incorporated herein in its entirety by reference. In another aspect, a “gridded” array analogous to a dot (or slot) blot may be used to arrange and link cDNA fragments or oligonucleotides to the surface of a substrate using a vacuum system, thermal, UV, mechanical or chemical bonding procedures. An array, such as those described above, may be produced by hand or by using available devices (slot blot or dot blot apparatus), materials (any suitable solid support), and machines (including robotic instruments), and may contain 8, 24, 96, 384, 1536, 6144 or more oligonucleotides, or any other number between two and one million which lends itself to the efficient use of commercially available instrumentation.

In order to conduct sample analysis using a microarray or detection kit, the RNA or DNA from a biological sample is made into hybridization probes. The mRNA is isolated, and cDNA is produced and used as a template to make antisense RNA (aRNA). The aRNA is amplified in the presence of fluorescent nucleotides, and labeled probes are incubated with the microarray or detection kit so that the probe sequences hybridize to complementary oligonucleotides of the microarray or detection kit. Incubation conditions are adjusted so that hybridization occurs with precise complementary matches or with various degrees of less complementarity. After removal of nonhybridized probes, a scanner is used to determine the levels and patterns of fluorescence. The scanned images are examined to determine degree of complementarity and the relative abundance of each oligonucleotide sequence on the microarray or detection kit. The biological samples may be obtained from any bodily fluids (such as blood, urine, saliva, phlegm, gastric juices, etc.), cultured cells, biopsies, or other tissue preparations. A detection system may be used to measure the absence, presence, and amount of hybridization for all of the distinct sequences simultaneously. This data may be used for large-scale correlation studies on the sequences, expression patterns, mutations, variants, or polymorphisms among samples.

Using such arrays, the present invention provides methods to identify the expression of the kinase proteins/peptides of the present invention. In detail, such methods comprise incubating a test sample with one or more nucleic acid molecules and assaying for binding of the nucleic acid molecule with components within the test sample. Such assays will typically involve arrays comprising many genes, at least one of which is a gene of the present invention and or alleles of the kinase gene of the present invention. FIG. 3 provides information on SNPs that have been found in the gene encoding the kinase protein of the present invention. SNPs were identified at 16 different nucleotide positions. Some of these SNPs, which are located 5′ of the ORF and in introns, may affect control/regulatory elements.

Conditions for incubating a nucleic acid molecule with a test sample vary. Incubation conditions depend on the format employed in the assay, the detection methods employed, and the type and nature of the nucleic acid molecule used in the assay. One skilled in the art will recognize that any one of the commonly available hybridization, amplification or array assay formats can readily be adapted to employ the novel fragments of the Human genome disclosed herein. Examples of such assays can be found in Chard, T, An Introduction to Radioimmunoassay and Related Techniques , Elsevier Science Publishers, Amsterdam, The Netherlands (1986); Bullock, G. R. et al., Techniques in Immunocytochemistry, Academic Press, Orlando, Fla. Vol. 1 (1982), Vol. 2 (1983), Vol. 3 (1985); Tijssen, P., Practice and Theory of Enzyme Immunoassays: Laboratory Techniques in Biochemistry and Molecular Biology, Elsevier Science Publishers, Amsterdam, The Netherlands (1985).

The test samples of the present invention include cells, protein or membrane extracts of cells. The test sample used in the above-described method will vary based on the assay format, nature of the detection method and the tissues, cells or extracts used as the sample to be assayed. Methods for preparing nucleic acid extracts or of cells are well known in the art and can be readily be adapted in order to obtain a sample that is compatible with the system utilized.

In another embodiment of the present invention, kits are provided which contain the necessary reagents to carry out the assays of the present invention.

Specifically, the invention provides a compartmentalized kit to receive, in close confinement, one or more containers which comprises: (a) a first container comprising one of the nucleic acid molecules that can bind to a fragment of the Human genome disclosed herein; and (b) one or more other containers comprising one or more of the following: wash reagents, reagents capable of detecting presence of a bound nucleic acid.

In detail, a compartmentalized kit includes any kit in which reagents are contained in separate containers. Such containers include small glass containers, plastic containers, strips of plastic, glass or paper, or arraying material such as silica. Such containers allows one to efficiently transfer reagents from one compartment to another compartment such that the samples and reagents are not cross-contaminated, and the agents or solutions of each container can be added in a quantitative fashion from one compartment to another. Such containers will include a container which will accept the test sample, a container which contains the nucleic acid probe, containers which contain wash reagents (such as phosphate buffered saline, Tris-buffers, etc.), and containers which contain the reagents used to detect the bound probe. One skilled in the art will readily recognize that the previously unidentified kinase gene of the present invention can be routinely identified using the sequence information disclosed herein can be readily incorporated into one of the established kit formats which are well known in the art, particularly expression arrays.

Vectors/Host Cells

The invention also provides vectors containing the nucleic acid molecules described herein. The term “vector” refers to a vehicle, preferably a nucleic acid molecule, which can transport the nucleic acid molecules. When the vector is a nucleic acid molecule, the nucleic acid molecules are covalently linked to the vector nucleic acid. With this aspect of the invention, the vector includes a plasmid, single or double stranded phage, a single or double stranded RNA or DNA viral vector, or artificial chromosome, such as a BAC, PAC, YAC, OR MAC.

A vector can be maintained in the host cell as an extrachromosomal element where it replicates and produces additional copies of the nucleic acid molecules. Alternatively, the vector may integrate into the host cell genome and produce additional copies of the nucleic acid molecules when the host cell replicates.

The invention provides vectors for the maintenance (cloning vectors) or vectors for expression (expression vectors) of the nucleic acid molecules. The vectors can function in prokaryotic or eukaryotic cells or in both (shuttle vectors).

Expression vectors contain cis-acting regulatory regions that are operably linked in the vector to the nucleic acid molecules such that transcription of the nucleic acid molecules is allowed in a host cell. The nucleic acid molecules can be introduced into the host cell with a separate nucleic acid molecule capable of affecting transcription. Thus, the second nucleic acid molecule may provide a trans-acting factor interacting with the cis-regulatory control region to allow transcription of the nucleic acid molecules from the vector. Alternatively, a trans-acting factor may be supplied by the host cell. Finally, a trans-acting factor can be produced from the vector itself. It is understood, however, that in some embodiments, transcription and/or translation of the nucleic acid molecules can occur in a cell-free system.

The regulatory sequence to which the nucleic acid molecules described herein can be operably linked include promoters for directing mRNA transcription. These include, but are not limited to, the left promoter from bacteriophage X, the lac, TRP, and TAC promoters from E. coli , the early and late promoters from SV40, the CMV immediate early promoter, the adenovirus early and late promoters, and retrovirus long-terminal repeats.

In addition to control regions that promote transcription, expression vectors may also include regions that modulate transcription, such as repressor binding sites and enhancers. Examples include the SV40 enhancer, the cytomegalovirus immediate early enhancer, polyoma enhancer, adenovirus enhancers, and retrovirus LTR enhancers.

In addition to containing sites for transcription initiation and control, expression vectors can also contain sequences necessary for transcription termination and, in the transcribed region a ribosome binding site for translation. Other regulatory control elements for expression include initiation and termination codons as well as polyadenylation signals. The person of ordinary skill in the art would be aware of the numerous regulatory sequences that are useful in expression vectors. Such regulatory sequences are described, for example, in Sambrook et al., Molecular Cloning: A Laboratory Manual. 2nd. ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y., (1989).

A variety of expression vectors can be used to express a nucleic acid molecule. Such vectors include chromosomal, episomal, and virus-derived vectors, for example vectors derived from bacterial plasmids, from bacteriophage, from yeast episomes, from yeast chromosomal elements, including yeast artificial chromosomes, from viruses such as baculoviruses, papovaviruses such as SV40, Vaccinia viruses, adenoviruses, poxviruses, pseudorabies viruses, and retroviruses. Vectors may also be derived from combinations of these sources such as those derived from plasmid and bacteriophage genetic elements, e.g. cosmids and phagemids. Appropriate cloning and expression vectors for prokaryotic and eukaryotic hosts are described in Sambrook et al., Molecular Cloning: A Laboratory Manual. 2nd. ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y., (1989).

The regulatory sequence may provide constitutive expression in one or more host cells (i.e. tissue specific) or may provide for inducible expression in one or more cell types such as by temperature, nutrient additive, or exogenous factor such as a hormone or other ligand. A variety of vectors providing for constitutive and inducible expression in prokaryotic and eukaryotic hosts are well known to those of ordinary skill in the art.

The nucleic acid molecules can be inserted into the vector nucleic acid by well-known methodology. Generally, the DNA sequence that will ultimately be expressed is joined to an expression vector by cleaving the DNA sequence and the expression vector with one or more restriction enzymes and then ligating the fragments together. Procedures for restriction enzyme digestion and ligation are well known to those of ordinary skill in the art.

The vector containing the appropriate nucleic acid molecule can be introduced into an appropriate host cell for propagation or expression using well-known techniques. Bacterial cells include, but are not limited to, E. coli , Streptomyces, and Salmonella typhimurium . Eukaryotic cells include, but are not limited to, yeast, insect cells such as Drosophila, animal cells such as COS and CHO cells, and plant cells.

As described herein, it may be desirable to express the peptide as a fusion protein. Accordingly, the invention provides fusion vectors that allow for the production of the peptides. Fusion vectors can increase the expression of a recombinant protein, increase the solubility of the recombinant protein, and aid in the purification of the protein by acting for example as a ligand for affinity purification. A proteolytic cleavage site may be introduced at the junction of the fusion moiety so that the desired peptide can ultimately be separated from the fusion moiety. Proteolytic enzymes include, but are not limited to, factor Xa, thrombin, and enterokinase. Typical fusion expression vectors include pGEX (Smith et al., Gene 67:3140 (1988)), pMAL New England Biolabs, Beverly, Mass.) and pRIT5 (Pharmacia, Piscataway, N.J.) which fuse glutathione S-transferase (GST), maltose E binding protein, or protein A, respectively, to the target recombinant protein. Examples of suitable inducible non-fusion E. coli expression vectors include pTrc (Amann et al., Gene 69:301-315 (1988)) and pET 11 d (Studier et al., Gene Expression Technology: Methods in Enzymology 185:60-89 (1990)).

Recombinant protein expression can be maximized in host bacteria by providing a genetic background wherein the host cell has an impaired capacity to proteolytically cleave the recombinant protein. (Gottesman, S., Gene Expression Technology: Methods in Enzymology 185, Academic Press, San Diego, Calif. (1990)119-128). Alternatively, the sequence of the nucleic acid molecule of interest can be altered to provide preferential codon usage for a specific host cell, for example E. coli . (Wada et al., Nucleic Acids Res. 20:2111-2118 (1992)).

The nucleic acid molecules can also be expressed by expression vectors that are operative in yeast. Examples of vectors for expression in yeast e.g., S. cerevisiae include pYepSec1 (Baldari, et al., EMBO J 6:229-234 (1987)), pMFa (Kurjan et al., Cell 30:933-943(1982)), pJRY88 (Schultz et al., Gene 54:113-123 (1987)), and pYES2 (Invitrogen Corporation, San Diego, Calif.).

The nucleic acid molecules can also be expressed in insect cells using, for example, baculovirus expression vectors. Baculovirus vectors available for expression of proteins in cultured insect cells (e.g., Sf9 cells) include the pAc series (Smith et al., Mol. Cell Biol. 3:2156-2165 (1983)) and the pVL series (Lucklow et al., Virology 170:31-39 (1989)).

In certain embodiments of the invention, the nucleic acid molecules described herein are expressed in mammalian cells using mammalian expression vectors. Examples of mammalian expression vectors include pCDM8 (Seed, B. Nature 329:840(1987)) and pMT2PC (Kaufman et al., EMBO J. 6:187-195 (1987)).

The expression vectors listed herein are provided by way of example only of the well-known vectors available to those of ordinary skill in the art that would be useful to express the nucleic acid molecules. The person of ordinary skill in the art would be aware of other vectors suitable for maintenance propagation or expression of the nucleic acid molecules described herein. These are found for example in Sambrook, J., Fritsh, E. F., and Maniatis, T. Molecular Cloning: A Laboratory Manual. 2 nd, ed., Cold Spring Harbor Laboratory , Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y., 1989.

The invention also encompasses vectors in which the nucleic acid sequences described herein are cloned into the vector in reverse orientation, but operably linked to a regulatory sequence that permits transcription of antisense RNA. Thus, an antisense transcript can be produced to all, or to a portion, of the nucleic acid molecule sequences described herein, including both coding and non-coding regions. Expression of this antisense RNA is subject to each of the parameters described above in relation to expression of the sense RNA (regulatory sequences, constitutive or inducible expression, tissue-specific expression).

The invention also relates to recombinant host cells containing the vectors described herein. Host cells therefore include prokaryotic cells, lower eukaryotic cells such as yeast, other eukaryotic cells such as insect cells, and higher eukaryotic cells such as mammalian cells.

The recombinant host cells are prepared by introducing the vector constructs described herein into the cells by techniques readily available to the person of ordinary skill in the art. These include, but are not limited to, calcium phosphate transfection, DEAE-dextran-mediated transfection, cationic lipid-mediated transfection, electroporation, transduction, infection, lipofection, and other techniques such as those found in Sambrook, et al. ( Molecular Cloning: A Laboratory Manual. 2 nd, ed., Cold Spring Harbor Laboratory , Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y., 1989).

Host cells can contain more than one vector. Thus, different nucleotide sequences can be introduced on different vectors of the same cell. Similarly, the nucleic acid molecules can be introduced either alone or with other nucleic acid molecules that are not related to the nucleic acid molecules such as those providing trans-acting factors for expression vectors. When more than one vector is introduced into a cell, the vectors can be introduced independently, co-introduced or joined to the nucleic acid molecule vector.

In the case of bacteriophage and viral vectors, these can be introduced into cells as packaged or encapsulated virus by standard procedures for infection and transduction. Viral vectors can be replication-competent or replication-defective. In the case in which viral replication is defective, replication will occur in host cells providing functions that complement the defects.

Vectors generally include selectable markers that enable the selection of the subpopulation of cells that contain the recombinant vector constructs. The marker can be contained in the same vector that contains the nucleic acid molecules described herein or may be on a separate vector. Markers include tetracycline or ampicillin-resistance genes for prokaryotic host cells and dihydrofolate reductase or neomycin resistance for eukaryotic host cells. However, any marker that provides selection for a phenotypic trait will be effective.

While the mature proteins can be produced in bacteria, yeast, mammalian cells, and other cells under the control of the appropriate regulatory sequences, cell-free transcription and translation systems can also be used to produce these proteins using RNA derived from the DNA constructs described herein.

Where secretion of the peptide is desired, which is difficult to achieve with multi-transmembrane domain containing proteins such as kinases, appropriate secretion signals are incorporated into the vector. The signal sequence can be endogenous to the peptides or heterologous to these peptides.

Where the peptide is not secreted into the medium, which is typically the case with kinases, the protein can be isolated from the host cell by standard disruption procedures, including freeze thaw, sonication, mechanical disruption, use of lysing agents and the like. The peptide can then be recovered and purified by well-known purification methods including ammonium sulfate precipitation, acid extraction, anion or cationic exchange chromatography, phosphocellulose chromatography, hydrophobic-interaction chromatography, affinity chromatography, hydroxylapatite chromatography, lectin chromatography, or high performance liquid chromatography.

It is also understood that depending upon the host cell in recombinant production of the peptides described herein, the peptides can have various glycosylation patterns, depending upon the cell, or maybe non-glycosylated as when produced in bacteria. In addition, the peptides may include an initial modified methionine in some cases as a result of a host-mediated process.

Uses of Vectors and Host Cells

The recombinant host cells expressing the peptides described herein have a variety of uses. First, the cells are useful for producing a kinase protein or peptide that can be further purified to produce desired amounts of kinase protein or fragments. Thus, host cells containing expression vectors are useful for peptide production.

Host cells are also useful for conducting cell-based assays involving the kinase protein or kinase protein fragments, such as those described above as well as other formats known in the art. Thus, a recombinant host cell expressing a native kinase protein is useful for assaying compounds that stimulate or inhibit kinase protein function.

Host cells are also useful for identifying kinase protein mutants in which these functions are affected. If the mutants naturally occur and give rise to a pathology, host cells containing the mutations are useful to assay compounds that have a desired effect on the mutant kinase protein (for example, stimulating or inhibiting function) which may not be indicated by their effect on the native kinase protein.

Genetically engineered host cells can be further used to produce non-human transgenic animals. A transgenic animal is preferably a mammal, for example a rodent, such as a rat or mouse, in which one or more of the cells of the animal include a transgene. A transgene is exogenous DNA which is integrated into the genome of a cell from which a transgenic animal develops and which remains in the genome of the mature animal in one or more cell types or tissues of the transgenic animal. These animals are useful for studying the function of a kinase protein and identifying and evaluating modulators of kinase protein activity. Other examples of transgenic animals include non-human primates, sheep, dogs, cows, goats, chickens, and amphibians.

A transgenic animal can be produced by introducing nucleic acid into the male pronuclei of a fertilized oocyte, e.g., by microinjection, retroviral infection, and allowing the oocyte to develop in a pseudopregnant female foster animal. Any of the kinase protein nucleotide sequences can be introduced as a transgene into the genome of a non-human animal, such as a mouse.

Any of the regulatory or other sequences useful in expression vectors can form part of the transgenic sequence. This includes intronic sequences and polyadenylation signals, if not already included. A tissue-specific regulatory sequence(s) can be operably linked to the transgene to direct expression of the kinase protein to particular cells.

Methods for generating transgenic animals via embryo manipulation and microinjection, particularly animals such as mice, have become conventional in the art and are described, for example, in U.S. Pat. Nos. 4,736,866 and 4,870,009, both by Leder et al., U.S. Pat. No. 4,873,191 by Wagner et al. and in Hogan, B., Manipulating the Mouse Embryo , (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y., 1986). Similar methods are used for production of other transgenic animals. A transgenic founder animal can be identified based upon the presence of the transgene in its genome and/or expression of transgenic mRNA in tissues or cells of the animals. A transgenic founder animal can then be used to breed additional animals carrying the transgene. Moreover, transgenic animals carrying a transgene can further be bred to other transgenic animals carrying other transgenes. A transgenic animal also includes animals in which the entire animal or tissues in the animal have been produced using the homologously recombinant host cells described herein.

In another embodiment, transgenic non-human animals can be produced which contain selected systems that allow for regulated expression of the transgene. One example of such a system is the cre/loxP recombinase system of bacteriophage P1. For a description of the cre/loxP recombinase system, see, e.g., Lakso et al. PNAS 89:6232-6236 (1992). Another example of a recombinase system is the FLP recombinase system of S cerevisiae (O'Gorman et al. Science 251:1351-1355 (1991). If a cre/loxP recombinase system is used to regulate expression of the transgene, animals containing transgenes encoding both the Cre recombinase and a selected protein is required. Such animals can be provided through the construction of “double” transgenic animals, e.g., by mating two transgenic animals, one containing a transgene encoding a selected protein and the other containing a transgene encoding a recombinase.

Clones of the non-human transgenic animals described herein can also be produced according to the methods described in Wilmut, I. et al. Nature 385:810-813 (1997) and PCT International Publication Nos. WO 97/07668 and WO 97/07669. In brief, a cell, e.g., a somatic cell, from the transgenic animal can be isolated and induced to exit the growth cycle and enter G o phase. The quiescent cell can then be fused, e.g., through the use of electrical pulses, to an enucleated oocyte from an animal of the same species from which the quiescent cell is isolated. The reconstructed oocyte is then cultured such that it develops to morula or blastocyst and then transferred to pseudopregnant female foster animal. The offspring born of this female foster animal will be a clone of the animal from which the cell, e.g., the somatic cell, is isolated.

Transgenic animals containing recombinant cells that express the peptides described herein are useful to conduct the assays described herein in an in vivo context. Accordingly, the various physiological factors that are present in vivo and that could effect substrate binding, kinase protein activation, and signal transduction, may not be evident from in vitro cell-free or cell-based assays. Accordingly, it is useful to provide non-human transgenic animals to assay in vivo kinase protein function, including substrate interaction, the effect of specific mutant kinase proteins on kinase protein function and substrate interaction, and the effect of chimeric kinase proteins. It is also possible to assess the effect of null mutations, that is, mutations that substantially or completely eliminate one or more kinase protein functions.

All publications and patents mentioned in the above specification are herein incorporated by reference. Various modifications and variations of the described method and system of the invention will be apparent to those skilled in the art without departing from the scope and spirit of the invention. Although the invention has been described in connection with specific preferred embodiments, it should be understood that the invention as claimed should not be unduly limited to such specific embodiments. Indeed, various modifications of the above-described modes for carrying out the invention which are obvious to those skilled in the field of molecular biology or related fields are intended to be within the scope of the following claims.

#             SEQUENCE LISTING
<160> NUMBER OF SEQ ID NOS: 4
<210> SEQ ID NO 1
<211> LENGTH: 2061
<212> TYPE: DNA
<213> ORGANISM: Homo sapien
<400> SEQUENCE: 1
cggtgctgcc gggctcagcc ccgtctcctc ctcttgctcc ctcggccggg cg
#gcggtgac     60
tgtgcaccga cgtcggcgcg ggctgcaccg ccgcgtccgc ccgcccgcca gc
#atggccac    120
caccgccacc tgcacccgtt tcaccgacga ctaccagctc ttcgaggagc tt
#ggcaaggg    180
tgctttctct gtggtccgca ggtgtgtgaa gaaaacctcc acgcaggagt ac
#gcagcaaa    240
aatcatcaat accaagaaat tgtctgcccg ggatcaccag aaactagaac gt
#gaggctcg    300
gatatgtcga cttctgaaac atccaaacat cgtgcgcctc catgacagta tt
#tctgaaga    360
agggtttcac tacctcgtgt ttgaccttgt taccggcggg gagctgtttg aa
#gacattgt    420
ggccagagag tactacagtg aagcagatgc cagccactgt atacatcaga tt
#ctggagag    480
tgttaaccac atccaccagc atgacatcgt ccacagggac ctgaagcctg ag
#aacctgct    540
gctggcgagt aaatgcaagg gtgccgccgt caagctggct gattttggcc ta
#gccatcga    600
agtacaggga gagcagcagg cttggtttgg ttttgctggc accccaggtt ac
#ttgtcccc    660
tgaggtcttg aggaaagatc cctatggaaa acctgtggat atctgggcct gc
#ggggtcat    720
cctgtatatc ctcctggtgg gctatcctcc cttctgggat gaggatcagc ac
#aagctgta    780
tcagcagatc aaggctggag cctatgattt cccatcacca gaatgggaca cg
#gtaactcc    840
tgaagccaag aacttgatca accagatgct gaccataaac ccagcaaagc gc
#atcacggc    900
tgaccaggct ctcaagcacc cgtgggtctg tcaacgatcc acggtggcat cc
#atgatgca    960
tcgtcaggag actgtggagt gtttgcgcaa gttcaatgcc cggagaaaac tg
#aagggtgc   1020
catcctcacg accatgcttg tctccaggaa cttctcagtt ggcaggcaga gc
#tccgcccc   1080
cgcctcgcct gccgcgagcg ccgccggcct ggccgggcaa gctgccaaaa gc
#ctattgaa   1140
caagaagtcg gatggcggtg tcaagaaaag gaagtcgagt tccagcgtgc ac
#ctaatgga   1200
gccacaaacc actgtggtac acaacgctac agatgggatc aagggctcca ca
#gagagctg   1260
caacaccacc acagaagatg aggacctcaa agctgccccg ctccgcactg gg
#aatggcag   1320
ctcggtgcct gaaggacgga gctcccggga cagaacagcc ccctctgcag gc
#atgcagcc   1380
ccagccttct ctctgctcct cagccatgcg aaaacaggag atcattaaga tt
#acagaaca   1440
gctgattgaa gccatcaaca atggggactt tgaggcctac acgaagattt gt
#gatccagg   1500
cctcacttcc tttgagcctg aggcccttgg taacctcgtg gaggggatgg at
#ttccataa   1560
gttttacttt gagaatctcc tgtccaagaa cagcaagcct atccatacca cc
#atcctaaa   1620
cccacacgtc cacgtgattg gggaggacgc agcgtgcatc gcctacatcc gc
#ctcaccca   1680
gtacatcgac gggcagggtc ggcctcgcac cagccagtca gaagagaccc gg
#gtctggca   1740
ccgtcgggat ggcaagtggc tcaatgtcca ctatcactgc tcaggggccc ct
#gccgcacc   1800
gctgcagtga gctcagccac aggggcttta ggagattcca gccggaggtc ca
#accttcgc   1860
agccagtggc tctggagggc ctgagtgaca gcggcagtcc tgtttgtttg ag
#gtttaaaa   1920
caattcaatt acaaaagcgg cagcagccaa tgcacgcccc tgcatgcagc cc
#tcccgccc   1980
gcccttcgtg tctgtctctg ctgtaccgag gtgtttttta catttaagaa aa
#aaaaaaaa   2040
aaaaaaaaaa aaaaaaaaaa a
#
#                2061
<210> SEQ ID NO 2
<211> LENGTH: 565
<212> TYPE: PRT
<213> ORGANISM: Homo sapien
<400> SEQUENCE: 2
Met Ala Thr Thr Ala Thr Cys Thr Arg Phe Th
#r Asp Asp Tyr Gln Leu
1               5
#                10
#                15
Phe Glu Glu Leu Gly Lys Gly Ala Phe Ser Va
#l Val Arg Arg Cys Val
20
#            25
#            30
Lys Lys Thr Ser Thr Gln Glu Tyr Ala Ala Ly
#s Ile Ile Asn Thr Lys
35
#        40
#        45
Lys Leu Ser Ala Arg Asp His Gln Lys Leu Gl
#u Arg Glu Ala Arg Ile
50
#    55
#    60
Cys Arg Leu Leu Lys His Pro Asn Ile Val Ar
#g Leu His Asp Ser Ile
65
#70
#75
#80
Ser Glu Glu Gly Phe His Tyr Leu Val Phe As
#p Leu Val Thr Gly Gly
85
#                90
#                95
Glu Leu Phe Glu Asp Ile Val Ala Arg Glu Ty
#r Tyr Ser Glu Ala Asp
100
#           105
#           110
Ala Ser His Cys Ile His Gln Ile Leu Glu Se
#r Val Asn His Ile His
115
#       120
#       125
Gln His Asp Ile Val His Arg Asp Leu Lys Pr
#o Glu Asn Leu Leu Leu
130
#   135
#   140
Ala Ser Lys Cys Lys Gly Ala Ala Val Lys Le
#u Ala Asp Phe Gly Leu
145                 1
#50                 1
#55                 1
#60
Ala Ile Glu Val Gln Gly Glu Gln Gln Ala Tr
#p Phe Gly Phe Ala Gly
165
#               170
#               175
Thr Pro Gly Tyr Leu Ser Pro Glu Val Leu Ar
#g Lys Asp Pro Tyr Gly
180
#           185
#           190
Lys Pro Val Asp Ile Trp Ala Cys Gly Val Il
#e Leu Tyr Ile Leu Leu
195
#       200
#       205
Val Gly Tyr Pro Pro Phe Trp Asp Glu Asp Gl
#n His Lys Leu Tyr Gln
210
#   215
#   220
Gln Ile Lys Ala Gly Ala Tyr Asp Phe Pro Se
#r Pro Glu Trp Asp Thr
225                 2
#30                 2
#35                 2
#40
Val Thr Pro Glu Ala Lys Asn Leu Ile Asn Gl
#n Met Leu Thr Ile Asn
245
#               250
#               255
Pro Ala Lys Arg Ile Thr Ala Asp Gln Ala Le
#u Lys His Pro Trp Val
260
#           265
#           270
Cys Gln Arg Ser Thr Val Ala Ser Met Met Hi
#s Arg Gln Glu Thr Val
275
#       280
#       285
Glu Cys Leu Arg Lys Phe Asn Ala Arg Arg Ly
#s Leu Lys Gly Ala Ile
290
#   295
#   300
Leu Thr Thr Met Leu Val Ser Arg Asn Phe Se
#r Val Gly Arg Gln Ser
305                 3
#10                 3
#15                 3
#20
Ser Ala Pro Ala Ser Pro Ala Ala Ser Ala Al
#a Gly Leu Ala Gly Gln
325
#               330
#               335
Ala Ala Lys Ser Leu Leu Asn Lys Lys Ser As
#p Gly Gly Val Lys Lys
340
#           345
#           350
Arg Lys Ser Ser Ser Ser Val His Leu Met Gl
#u Pro Gln Thr Thr Val
355
#       360
#       365
Val His Asn Ala Thr Asp Gly Ile Lys Gly Se
#r Thr Glu Ser Cys Asn
370
#   375
#   380
Thr Thr Thr Glu Asp Glu Asp Leu Lys Ala Al
#a Pro Leu Arg Thr Gly
385                 3
#90                 3
#95                 4
#00
Asn Gly Ser Ser Val Pro Glu Gly Arg Ser Se
#r Arg Asp Arg Thr Ala
405
#               410
#               415
Pro Ser Ala Gly Met Gln Pro Gln Pro Ser Le
#u Cys Ser Ser Ala Met
420
#           425
#           430
Arg Lys Gln Glu Ile Ile Lys Ile Thr Glu Gl
#n Leu Ile Glu Ala Ile
435
#       440
#       445
Asn Asn Gly Asp Phe Glu Ala Tyr Thr Lys Il
#e Cys Asp Pro Gly Leu
450
#   455
#   460
Thr Ser Phe Glu Pro Glu Ala Leu Gly Asn Le
#u Val Glu Gly Met Asp
465                 4
#70                 4
#75                 4
#80
Phe His Lys Phe Tyr Phe Glu Asn Leu Leu Se
#r Lys Asn Ser Lys Pro
485
#               490
#               495
Ile His Thr Thr Ile Leu Asn Pro His Val Hi
#s Val Ile Gly Glu Asp
500
#           505
#           510
Ala Ala Cys Ile Ala Tyr Ile Arg Leu Thr Gl
#n Tyr Ile Asp Gly Gln
515
#       520
#       525
Gly Arg Pro Arg Thr Ser Gln Ser Glu Glu Th
#r Arg Val Trp His Arg
530
#   535
#   540
Arg Asp Gly Lys Trp Leu Asn Val His Tyr Hi
#s Cys Ser Gly Ala Pro
545                 5
#50                 5
#55                 5
#60
Ala Ala Pro Leu Gln
565
<210> SEQ ID NO 3
<211> LENGTH: 62804
<212> TYPE: DNA
<213> ORGANISM: Homo sapien
<220> FEATURE:
<221> NAME/KEY: misc_feature
<222> LOCATION: (1)...(62804)
<223> OTHER INFORMATION: n = A,T,C or G
<400> SEQUENCE: 3
ttgcccctgg cctggtctcc ctgatcaacc cgcgcctgaa gggtttcttt ct
#aataatgg     60
ccctggtgct tgcgcaagtc tagactgtca gctcccagag ggaaggcggc tg
#gcagctgg    120
ctctgcgcag gctgggggcg cctcccgggc gtgcagcctg gcacaggctc ct
#tgaccttg    180
gctctctccc cacgtgctag gagcccggtt gggggctcgg gacccgcgtg ta
#ggacccgt    240
ccagagaggt cagtggtcca gactcctaca ctcctaacac atgcaccctc gc
#atgcacgt    300
tcccgagccc gcgcggggtc cgccccggga caagcccata agtcgcgaac ct
#tccagnnn    360
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nn
#nnnnnnnn    420
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nn
#nnnnnnnn    480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nn
#nnnnnnnn    540
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nn
#nnnnnnnn    600
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nn
#nnnnnnnn    660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nn
#nnnnnnnn    720
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nn
#nnnnnnnn    780
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nn
#nnnnnnnn    840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nn
#nnnnnnnn    900
nnnnnnnnnn nnnnnnnnnn nnnnntgtaa gccaccggcg ccgggcggtc tc
#gacattaa    960
atttcaaaat gttttctccg gtttgtcact tgtggtttta ctatgttcaa tg
#ggtctcac   1020
caagcaattt tgcaaaatag ttaacttatt ctctttttct tacatgactt ct
#tgactttg   1080
agccatagtt aggaaaggtt tgctcactct cacattagag taaaatttat cc
#acattttc   1140
atctaggatt agtgctcatt tttttattat tatgaatatc ttcttcattt gg
#ggtttgtt   1200
catgtatatt ccatgaacaa tggacgcggg tgcagcattt tagcatcagc ta
#tccccttc   1260
ccatccgcaa tgagctggcc gctgcagcag ccccggcccc ccacccccac cc
#gcggcgcc   1320
gagcccggcc actgcagccc ccgccccgcc cgccccccca gacgtttcca ga
#gctcagag   1380
tgcgagctcc cgtttgacgg ggacgtcaag gaaaatagca tgggaagggg ag
#ttcttgat   1440
gtctgactgt gtcctctctt cccttgctgt cagttgagcc gggatgcagt ga
#gatgaaac   1500
cggctgtggg ggggtttgag cctcactttg ccccatggtt gagggagatt tc
#tctttcag   1560
gggatgatac cctcttttta atctttcctt ccccgacctt cagctgttcc tg
#ctgagaga   1620
agggcagggt ctctctgctc ccttctgccc tggttctctt ggccgggacc gc
#agggctgt   1680
ctgagatgca gcaggtgtgt gttttcagca tcgcccaccc gctcctgatg tg
#cagcctga   1740
ggtggaggct gttgccttgc ccagggactg gatgaggggg tgggagcgcg gc
#acgccacc   1800
cacatctgtt cagtgtcctg cggtggccgc gtccttttgc ctcatgttgg at
#ggtggtgg   1860
tcacagcgcc ggtgtgtgtg catgtacgtg agtgtgacta gaggtctggt gg
#tgggagca   1920
tcatcgtccc cagacttgaa gtgtgtctgt gtcactctgc cctgctccgt gt
#cccagttc   1980
ttttcccctt ctccctccag gggtgctttc tctgtggtcc gcaggtgtgt ga
#agaaaacc   2040
tccacgcagg agtacgcagc aaaaatcatc aataccaaga aattgtctgc cc
#ggggtgag   2100
tgttccctgt cttgacctct tcctgagggt gcctccaggg gccatggttt ct
#tttgagga   2160
agccccagga attgggggtt gtgcgtttta gcacttggag aggagttgga at
#ttcagact   2220
ggttggactt tgtgtcaggc tgaagccaga aaaggagttg catgggggac tg
#gaagcgcc   2280
caggtacaaa agaatgaagg aagagatgca agtagctgca gtggccccca aa
#ggctcaag   2340
ggagttcggt cttcagggag gtggaggata tgggggtagt gggtggtaca ga
#atggggag   2400
ctcttaattt ggggcatttg gagcctctcc ctttggggca gtggtggcta ct
#gcaggcct   2460
ttcctggtcc cttcttcacc acgggctgag ttaggatgga aatgcagtaa gt
#gagcagct   2520
ctgacaaagc cagcctcccc tgcccaccag gcggcagaac agactcccaa gg
#gaagggaa   2580
tctgtaaaca tcaggggagg ctgctactgg cgagggcttc tcaggaacaa at
#tctgccag   2640
atgaacttga ttgctttttt gatcaaatta caaagttggt ggtgcagcag ca
#gatgtagt   2700
ctgtcctggg tggagggtga tgcctcatgg tctagaaatc ccaaaggccc gg
#tttgggca   2760
ggaactgcac tgcctccgaa ctgcactgcc tccgagtctg aggagcataa ag
#gccaaggc   2820
cttggggcct cacttgcgag atcctcccaa gtacctgagg cttggagggt ca
#gggcctgt   2880
ctttcacacc ttgaacctac actctctgaa cttcctattg ggtacttgcc aa
#actcacct   2940
catctgatag gtgtagaccc agcaatgtgt gaagtgctct gggaacaggt ct
#ggtgagta   3000
cagaggtcag atctcggagg gctgcagggt gcagctgggg gacaaaggtt gt
#gaaactca   3060
gagaaaggaa ttagggctgg gcagtaggat gccataaata tatttggagc ca
#ggacacat   3120
gccctgggga agacatgggc tttggccaat aatgacacgg gtttctctgg ga
#taagagac   3180
ataatagatg tcccaaatgc ttagagaagc tctacaattc cacgggcttc tg
#tcgtgttg   3240
gcagttgttc tgggacctgt ttagcagggc cgtgtccact ccctgactgg gg
#actctctc   3300
tccatccctc tggtagggca ctaattgctg actcccatcc agctccatct ct
#tgctgttc   3360
gtgtacattg cctataaagt tggacttgtt tgttttcttt ctctctgggt ac
#cttgagtc   3420
tgaggatggt tgccatagag atatgtgggc agtcagatac cctggagtgg gg
#gtgggggg   3480
gacaacaggg gctgggctct ctggcagaca tcctctggcc aaggatggaa gg
#tgcaggca   3540
ggaacaatgg cttgaggctg gatacctctc ttgcccacac agcagagccc tg
#gtgcatca   3600
gaaacagggc tggcatctgg tgtctccagt tgatgatgca atgctttgct ct
#cttcatct   3660
caccagtgtc ctctgaccca tgggtaagag aaggagagat ggctgggagc cg
#aattctgg   3720
gatgtgagga taggtgatgt ggtgacttcc tgcagctgcc tgactggggc tt
#tcatttcc   3780
tactccttcc ctacctgcgt aaatttccat gacctgtgtg atagcctccc tt
#tcccttcc   3840
tcacctcctt ttaaccttgt cccatctttc ccaatggata tctttccctg gc
#caaactgg   3900
atgagacttg atttctcgtt gatttttttt tttttcccct caagaagagg at
#tcttgtgt   3960
aaaagtatat gcttcagaca gcaactcccc ctctcccaag atggatatgc ca
#agactggg   4020
ctctgttgtg tggcctcatg tgccaggttg actttgggac agaggcacag at
#gataggca   4080
cagatgccag ccagaggggt cagaatgtgt aagtgccagc cagtactgtg tg
#gaggtggg   4140
aaagtggaaa ggggctgtct tggagatgga gggaacaagg tggggctgga ct
#ataggtgt   4200
gggcatggga gatgtgaact cctggagaga tctgggccag ggtagccatg gg
#ctggttcc   4260
catggggtta gggagtgagg gccatggctt ccctgcagac tctcagttta ca
#ctatatat   4320
tttataaagg tgcagccact ggagctgggt ttcactcatc gctgtctgcc ta
#ggtctccg   4380
caggtgttgg atttctgtgt ctgggaatgt cgtgggccca ccagggtcat ct
#gtgaaggt   4440
ctgaaggggc ttgctgtgtt cactgggtct tcctgcctcc tgtctttctt gt
#ttgtgatt   4500
ctctgggcta caaactgaaa agataaaaag agggtataga gctgtttctc ct
#tggcatcc   4560
ctggtgaggt ggctaggagt cagggagagg gatcacctgt tcttctgggg gg
#gtccaatc   4620
gagacaggaa gccttctttt gggctgttgt gtcttgtcac tgtggcctca ga
#ggcccaca   4680
ttggcggcta ggttgcaagg tggggagttc atgcggatat gcgttgagca ct
#gtctttgt   4740
ctgcgggcct gtctacataa agtcactgaa agtcacataa cgtcactccg tt
#tgcttcag   4800
aaccgtgata ggagtggagc tgggctctta agggagccca tggttccaag ct
#tagctcca   4860
ctaggccgaa ggaggcattt aaaataggct tggatgcagg agctagtggg cc
#aggtgatg   4920
gcaatgataa gtcgttattt taagatttaa gagcaccccc ctcaaggagc ct
#gagccctt   4980
atgtcttttt ttatttttaa atcttcatat tcccttctta tctttattca ta
#tgcataca   5040
gattttcacc tcgtggagca taacatttta tatcctgctc tctttgctta ta
#tccaaagc   5100
atttccccca tattactaca gttgaagggc aaatggtcct ttcttctacg tc
#gtttagga   5160
tttatcccta aaacaatcag catcacaaga aacttctgta tatgtaccat tt
#atctggat   5220
tccagttgct tttaccaaga tagatactgg ggtaatgccc ttggccttac ta
#agagatgc   5280
taccggaaac agtgttttga aatctgttat aatactttaa catatttatt ta
#atctgtac   5340
attccgtgtg aagaaatttc ttttgaagct aaatgtaagc aaaagctttc ct
#ctttgtga   5400
ggacctgaga ggtgagggaa gggtccttat gtgtttctat acttctgcat gg
#gcaggccc   5460
tagcgaagtg cctgacgtat gccagccaca tacacattaa atgaatgggt ca
#agaggact   5520
atgtaaccaa tcatggttgc cttttggctt tggctcctag gaaactcaga gt
#caagttgc   5580
cagagccctt gtaccctgct acagacttgg gtcctccctt tctgatccag gg
#agccaagc   5640
tgcagacctg atacggctgc tggaagagag gacagatgag gataaagacc tg
#tgcttggg   5700
gcataaggca gagtgggaga tgtaggcaga catttagctg atgattcctc ct
#tccctgtc   5760
actaaatggc actatagggc cactgttggg atctcttcca ggtagtgatt tt
#caatttta   5820
gtgtgcgtaa ggatcaccct gagtactagt ttaaaaaata cagacttctg gg
#ctttagcc   5880
acagagattc tgctttagga ggtctagggt ggagctgcag aatctgcatt tt
#taacacat   5940
gctccagtga atttcatgca ggtgaggcat gagccactct ttaagagatg cc
#acctaaaa   6000
tctgcaacaa cagttgctct tgccatgccc tctggaattc aacagacaca cc
#ttggccca   6060
tccttctcca gattgtgtgt ctgccactat gtggccatct gtgcacatgg gc
#tgttctgt   6120
gattaggggc ctcgttctgg gcctcgggat tggggtgtct gtgtctgagg ct
#gcggcaag   6180
ctgggtggct cgggttgtgg catgttggcc accagaaggg taaaggctgt cc
#ctttctgg   6240
gtccagctgg ccctggggac tgaaatggga tcccctggat ggtgccagct ga
#gagtcccc   6300
gcccccttag tgttggcctg agtagccccc atgacatttg tgtcccctgt gg
#tatctcca   6360
agtgagactt tcctgttaag gatctgggtg aagtgaggga aagagaaggg ag
#ggggaagc   6420
agtaatgcag ggagtgggag aaggaagaga aatccacaca gcactggaac ac
#aggcctcg   6480
aggaagcatt taaggaggct gtgtgcgaaa ccatgctttc ctcctgagga ta
#aaacaggc   6540
caatttctgt aaacagagaa atgggcatcc tgcatatcag tgatggagcg cc
#tctacttt   6600
ctctcctgaa gggatggaag ccgactgcag gtccctctgt gcaaaggctt ct
#gccaggcg   6660
gcttttgtca cgcggtcacg ttgagctgtg ggccttagca cacacaacac tg
#gcctgtcc   6720
ccctcccctc ccacctgtct tcctagagtg acttggggtg ctgcatcatg gt
#gtggggat   6780
ggaggtggga aggttgccct gtcctgtcag ggaggcccct gccttcttcc tg
#ctgcttcc   6840
tctggtccct tgtcaccata cccttgttcg aagctgtgct gaaaccctag ag
#gtgagtgg   6900
ctgaccccat tctctgctga gactggagat agggaagggg aggctgggtg tg
#accattcc   6960
tgctcccatc tgtatgcttg ctgctctctg aacagctttg gcagaccaac aa
#gggcctga   7020
tcccatgggt gccaaaaggg tggtgacagg aggagatggg cactttgcac ct
#cttgaatg   7080
cctctctgca gagccccttt gtcacctacc catggccaga cagatctgcc gc
#aggaccgc   7140
tggggaaatc aaagcacaaa agctttgtct ggggtctttt ttttcttttt tg
#gttttgtg   7200
ctgcaggtgc ccatgacttt gccagggctc agacccagcg tcctcaggcc gt
#gtggcctc   7260
cacccactcc ttggcgcctt tctttaaaac acaggttctg gatactttgt tc
#ctgtgatg   7320
aatcttggca tatcacctca cacctctcca tctaggcccc aagctccaag cc
#tggtggag   7380
caaatccctc ctcgttgctg gctgaggccc cattcccgtc tgtacccacc tc
#tctgggct   7440
gtgcggtggg gagatttcca gccactcctc cccaacacca tctccgcttc ct
#gggcccta   7500
tcagcagcag ccgcagcttc ccatctgctc ccctcttttc tcctcccttt ct
#ttcccttc   7560
ccccctgctt gctgctgccc tgggaggagc tatttttagg ggctgcttcc tg
#ggatgttt   7620
tacttggggc tggttaccat gaaggaaatg tcaccaaaac agtgggcaaa gg
#ctgcaggc   7680
accgggagcc ctgccggggg gcatggagaa cagacggctg acccttttct gg
#cccttgag   7740
agcagccaga gtgcccccag gcagagcctt gccttcttgg ggcttgctag tg
#accccttg   7800
gggattttct ctgtcaaagc tgattgaggg ccttttcgct atagggcatt tc
#ttggagcc   7860
tctcgcttcc cttgccttga gatccagagg ccaaagtggg gctcaggtct tt
#gtgtcacc   7920
aagttaaaac tgcttgagtg agggttgaag ataaggggag gatgctgggt ac
#atgcacag   7980
agccttgggg gttcacatgg gaccatttca ggccccgtcc ctctgtatca ca
#gcccccag   8040
ctagtcacca ggtgtacatg tgtgagggca ttagaaacca tggtcctgct ct
#tgtgtgtc   8100
ggatggactt tgcttttaat tggagactct ttgcatcttt agagtgagat tc
#aaagagga   8160
agggatgtgg catcacagtg tcagggtgag gtcggtggga tcgtggcttg gg
#attcccac   8220
tggtcagtgt cccaggccca gggctgtgca taagcagctg gggaaggtgg at
#tatgacat   8280
caaatccctg cgatgtcctt gtttctgctc ctcagagtgc caaggggacc ag
#acggcggc   8340
ctctgctgct tgggaagaag atgaaaggca ctcaggaggg cagcaagtga gg
#ccgcctcc   8400
catggagccc tgaaatcagt ggggttgcag gaagtttctc acatccatgt tt
#agggtcat   8460
aggcacagac ctgcaaaata ccctttgcaa agttaagaat gtctttgaga tt
#ggaacttg   8520
ggagagtcct cagtcagagt aggaatgtgc atcctttccc acgtacagag ga
#ttgtatgt   8580
ttacgtggca gcaggatctt atttgaagct agtgctggca tttgtgtttt tt
#ttttagga   8640
aaatgtcact aagtcaagca ggcccatccc tgagagggcc atggagaatc tg
#tggccagc   8700
cctccctggc cccctgacct ggcagaggaa ggaaagggca ttggagtagg ct
#tctgtctt   8760
caggccagag ggggaggtgg ttcaggggca ggcttggtgc accccttggc tg
#caagctat   8820
cacctcccta tctgcttcct cttttctgcc tcccctggtg catctggtca ct
#tcttgctg   8880
cccttcctgt gaaatcgtgg caccttggac caagtcctga agcacttggg ca
#gaaggcgg   8940
gagaggttgg gtttctagga tccttgtttc ccagggcctg gctctggcct gg
#gctcagac   9000
cactctggtc taggcaggct gctggggaaa ggctggagct gcttctgctt tc
#tgctcctg   9060
ttgccacctc tgctaatgat ggggaaaacc tgcagagggc tgtggttgga gc
#tgggctga   9120
aggccggcag gggtgggtct ctccatggca gtagcacaca ggcaggcagg aa
#gtggccct   9180
gtgcaaaagc gggaagtggc agttgtcaaa caggaagggg ggggctgggc tg
#tgggaggg   9240
gcggggatga gcctggtaga aaggtgcgtg gaggagggtc caccttggaa gg
#tctgagcc   9300
tctccctagt ggttactgga aggaggggtg tctcaagggg agacaccttt gc
#agcacctt   9360
gagatgccga gccagggccc tcccactgtg gaccaagccc attcagtggc ct
#cgcccttt   9420
ttggggttgg agatgctgcg tccagctggg atgcccttgc ttttgggaaa ga
#tgctctag   9480
aaaccactac tccatcctgg aacccctctg ctgccactgc tgctgggatg ga
#ccctctgc   9540
ttttttgcag ccgtgggcca gccctggatg tgactacagg acaggaagtg tc
#aggggaag   9600
agacaggaga caacagctgg agaggctggg tggtggccgg gcagtatgtg gc
#agcaggaa   9660
cggggagagc ggggcaggta gaaactgctc tgttcattga ggagagcttg tg
#gatggcag   9720
ggtgccacgg ctgcgaggaa gaggagggaa gcggacagtg gcacttcctg cg
#gcgttccc   9780
ctctctctga ggagcccctg ttgctgccca tcacctgcag actgtagaca ca
#ggtgggcc   9840
ccgccaaaac agggagggac actccacctc caggactgca atggaggacc at
#gtggggag   9900
cccagaagcc aggcaggagg gcttagttgc tgtgttgcag accctgcatc tg
#cctgggct   9960
gaggggacag tgggtcccat tcacagtgtc tctggtgata gctgtggcca ca
#agcccagc  10020
ccaggagacc ctgtcaagct tctcactggg cccttggaaa ggagctatat gc
#cagacctt  10080
atgcaaaact cttgacctgt accacctcag ttaaacctca gatcttgctg tc
#tctatttt  10140
agaagtgagg aacctcttgg ccgggtgccg tggctcacgc ctgtaatccc ag
#cactttgg  10200
gaggccgagg caggaggatc ataaggtcag gagatcgaga ccatcctggc ta
#acacagtg  10260
aaaccccgtc tctactgaaa aatacaaaaa aattagccgg gcatggtgat gg
#gcgcctgc  10320
agtcccagct actcgggagg ctgaggcagg agaagggcgt gaacctggga gg
#cggagctt  10380
gcagtgagcc gagatcatgc cactgcactc cagcctgggc aacagagtaa ga
#ctccatct  10440
caaaaaaaag caaaaaaaac aaacaaaaga agtgaggaac ctctttccca ag
#ataatgtg  10500
cctggctcac tgtctcacct actttgggtc ctaatcaaat gtcacctcct ta
#ctgaggct  10560
ttcttggact gccctactca aatctgcact ccccactttc tctgcttttt ct
#acgcagca  10620
cttgccgtga catctaacgt gctgttgagt tttcttactg tccatccctc cc
#ccatacac  10680
aacccactag agtgtcagct ccatgagggc agggattttt gtctgttttg tt
#cgccactg  10740
tcttcctagc atcttgaata ctgtctgtca catagtaggc ctcagtaaat at
#ttcttttt  10800
tttttttgac ttgctctgtc accccaagct ggagtgtagt ggcccaatct tg
#gctcactg  10860
cagcctccac ctcctgggtt ctagtgagca catttggcta aattttgtat tt
#ttagtaga  10920
gatggggttt tgccatgttg gccaggctgg tcttgaactc ctgacctcaa gt
#gatccacc  10980
caccttggcc tcccaaagta ctggactggg attacaggcg tgacccaccg cg
#cccagcca  11040
cgataaatat ttcttgaagg aatgaatgaa gctcgggtgg gtttaatagc tt
#gctggatg  11100
tggcagtgtt gggctcaatc cagggctgtc tgacttcaaa accgatgtgt tg
#ttaattgc  11160
catactccac agcttagaat cagaatgagg atcaaggtat agtcctgggg tt
#cagagaag  11220
acctgggcct tgccgggaac acagggctca gctccttgga gttaaggctg aa
#ctaagagg  11280
ctaacaagga ccctctggat gctgggcagc tcctttgagg agctgggagc ct
#gagtctgt  11340
gtatcttctc tccactcaaa gtcactggta aagcagagtg cccttatttt ta
#gtgctgtt  11400
gctgttgtgg gactgtaacc attagctagt aagagactta aggaaggaga ta
#aacattaa  11460
tcttctgggc cttccctcag ctgccacctc cgcattgcaa gatgctgttc tc
#ctgcacct  11520
gcccaggcaa ccaagcctga gagttatggg ctggagggtg gtgaggtttg tg
#cccagaga  11580
gagggccgtg ggtctgtagc tttggggctg gctggcttgg tacctccatc tc
#aagtccag  11640
ggatggaagg aaggtggggt catgtcaaca tcctgccaga tctggaagaa gc
#aagccccc  11700
cagccaccag gcaaggctgt tacagcctcc ttgagtgcct cgcttctgga gg
#tcactggc  11760
cacatccctg tgcctgggac caagggatgc caggtgatct gggagttggg ag
#ttacttgg  11820
ggttctcctg gctgcatcct ggtcggtggt catgctgaac ccaggcacag ga
#aggaaggc  11880
ctgacccaga tctttgggca gctgggacgg attagctggg cagcaggaac ta
#atctctgt  11940
ctgtccccac ctctttccac aaagtagagc tgttgctaga gggaaagttt ag
#gacaaagc  12000
tgggtttggt tagtgaaaca ataaatgtga atttcttcta gtccataatc cc
#tacattat  12060
ctcacactga cagtcctgag tttgaatccc ccttttatcc ctttcctgct gt
#gggatctt  12120
gggcaagtta cttaacttcc ctgggcctcc gtttcttcca tcatctggaa at
#gtggacaa  12180
tcatagcatt tacctaatgg gatcattgtg agggctgtgg gaagatttac ag
#aagctttt  12240
tgctgtttag ggtagaggca gggagacagg aatagcttgg cagctatgga tg
#tgaaggcc  12300
cctgcccggg cctggataat tcagggtgaa ctggactctc ttccttttgc ac
#cccctcca  12360
aagcctagag tcttaactca actctcacca ttctttatct ggccataata gc
#acaggggt  12420
ggagaaagag ggctctaggc tcagaccacc tgcatcactg cctgttcgtg tt
#accttagg  12480
cagattactc tatcttttta aacctgtttc ctcggtaata taatagagct aa
#tcagatcc  12540
ctacttcaca gagtttctgt aggtatgaaa tatggtaatc catgcctctg cc
#tgacatgt  12600
agtcagtgca tagtaagcga ttgttatggc gactactgtt attagtaaac cc
#ttattaag  12660
cccctgttta cagaaagaac tctagaaagc actacctgga aaggtacccc cg
#ccttcgaa  12720
gagcttgcaa ctgaaagata actgatgtaa tatatgatgt gagaatcgtg ag
#aagtgcat  12780
tgggaaatcg gggggggggg ggtggagtag gagggagaag tcacagtcta cc
#gagaggag  12840
cagggaagac ttcatgaagg aggtgacttt tggcaggatt tcagcaagta ga
#aagaggga  12900
aggacagtgg gggagggctg tgaggcctcc gtgctgtgag tagcatcctc tc
#ttcccacg  12960
tactggagct ctgccttcct gtggaaggaa ttgacccacg cagctcactt gg
#atctgggg  13020
acttgtggat ttctggttat tccaccaaaa ccaagtaatc ctggagtctg aa
#tttgaaga  13080
ggtcaaagct tacagccatg gtggccaaga ggactccggg gagaagcagg at
#ttgtgtcc  13140
tggtttctct ttctataaaa tgggcatcat actaatgcca cctcctagat tg
#ttatgagg  13200
ataaattaaa agaggcagct gcctggtgta gaagtaagct ctcaataaat gt
#tagctatt  13260
attattttaa gtcatcatta tcttgatcat caacctcttt attatcagca tc
#attatgtt  13320
tcaggcttgc catcaggact atgtagagaa tatatgcaaa acccctagcc ag
#tgccgagt  13380
atatattagg tgctcagtat aacttagcta ttattagtgt tcctaacaag aa
#agagattc  13440
tgggccaggc gcggtggctc acgcctataa tcccagcatt ttgggaggcc ga
#ggcgggtg  13500
gatcacctga ggtcaggagt tcgagaccaa cctggccaac gtggtgaaac cc
#cgtctcta  13560
ctaaaaatac aaaaattagc caggcgtggt ggtgtgtgcc tgtaatccca gc
#tactcggg  13620
aggctgaggc aggagaattg cttgaaccca ggaggcgaag gttgcagtga gc
#tgagatca  13680
caccactgca ccccagcctg ggcaacagaa cgagactccg tctcagaaag aa
#aaaaagag  13740
attctggaca ccctggacca ctgaaaccct gttgtggtgg aaagagcacc ag
#agttttag  13800
ttgaatacct ggattcaaat cccagctctg ctgctcactg gctcgaagtg tg
#caaaccct  13860
caagtcattt cctcatctgg aaaaggtggt cataactatc tatctggccc ag
#gcctggtg  13920
gctggtgcct atagttccag ctattcagga ggctgaggtg ggaggattgc tt
#gagcccag  13980
gagtttgagg ctgcgatcat gccactgcac tcctgcctga gggacaaagt ga
#gaccctaa  14040
aatgaaagga aaacaagttg tctccaggat tgccatgact tgctgcatta ct
#tcagcaga  14100
tcatcacaaa tgcatagtta gtacctgaac tgaaggaata tgaataacaa gg
#tgaccaca  14160
aggagaatgg atggttgatg gcttttgttt tttctcttct gcttttagat ca
#ccagaaac  14220
tagaacgtga ggctcggata tgtcgacttc tgaaacatcc aaacatcggt ga
#gtgcctgg  14280
gcatggagca ttttgtgggt attttgtaga agcagggata acagatatcc ac
#tgcttttg  14340
tgtgtgggat cacctctgtc tgtggacctt cacctggtgt ctgtttttac at
#gagcagga  14400
tagcaactgt gtctcagaat tctggggcat tctagtttag agacctgagt at
#ctgcatca  14460
ctgcggcacc ttctcagggc tggggtgtga ggcatcagaa taggtttcag at
#gctatttc  14520
ttccctttct ccttctgtct ttgggctgag gtccagggtc ctcagcgtgt ga
#ggttccgg  14580
gctcctagcc tgccagcgtc cctcaccagg ggccatccac agccctcatg ca
#agggtcag  14640
gattttgttt gtggacctga aagagttttg ttcctgctgc ggtgtcctgc ac
#actctggg  14700
ggtttccatg gtgctcccat ttgtattccc cagagccagg aaagcaagct gc
#ccccctgc  14760
ctggctcctc tggcagaagg gatggcagga accactcagt atggggaagg ag
#aaaaaaga  14820
ggatttctcc ctgctcccac cctgactggg gggacaagag cacattgttg gt
#tgtgctaa  14880
agcctgagga ggtttgcctg cctcaaccca ctctggctca gttttacttt gt
#tcagctga  14940
aatggtcttt gccaaaagcg ttggccctga tttggtgctc cttgcagaag gg
#acagaaac  15000
tgggctggct gcagtgtctg agcagaagcc ccagtgttga cttgaggcag ag
#caaggagc  15060
atctcctagg ttttccctga aagccctgag tcatcacaaa agacaacacg tg
#ttctgtgc  15120
tcctcaggca tggcctaaat ctcagggctc ccaccgtgcc ccagaggtcg cc
#tgctctgc  15180
tctgttggcg gccagggctg tgaggtgact tgctgaagcc taatgcttcc tt
#cagagcta  15240
cccagcccct ggcttcccag gtctcgggct agaacagtca aagtgagctc tg
#tcatggaa  15300
gggctgaggt cctgctctag ccctctggga gaggagcagc tctgaggtag tc
#agaacgtc  15360
agctgtgcag ggctttctag atggcaatca gcagcttgga ttacacccga ag
#cagattgg  15420
tgtggccagt ggtgatcggc tttgcctgat gcagtgtgtt ctgcagagcc ag
#cacctctc  15480
agctggtggg ttcctggccg cagaactact ggagctccta ggtggtttct ga
#ggttaggc  15540
cttcacctga aaacagcgca gtggggactg acatgttgcc tttggtagga ga
#gggcccac  15600
agagggaaac acctagaaca gcagtcacag attaggcatg ttttgcttgg ct
#gactcagt  15660
ggtctaaaaa tatttttatt atttgccaat atttaaaaat gagatttcac at
#tttgaaaa  15720
aagaaaaaat ctattccccc gcctttccag tcagaaggct tggctctgct ga
#gcccccac  15780
cttgcatggc cagaaggagc tgtgaggagc ggtggctgcc cctgcagccc gc
#tggccact  15840
gtccttgtca cccactatga gctcacattt gcattaccca cctgggcccc tg
#taggcctt  15900
gcaagcttgt gacctctaac ctagaagttc cagaacagga agaaaaaaca tg
#tgcgtgac  15960
taaagccacc cataagcaca gaagcatttt gatgttccag acccgggtct ca
#atatctga  16020
ggagggtaac ttcctttcct ttatgctcct tgtgaccaac tggtacagca gt
#gataattt  16080
gtcctcatgt aggcaggaga acagcagcta ggggtcagtg atgcaggaag ca
#gaaccatg  16140
tccacatcac ccgcgatgcg ggcgggttga ccatgggcgg gttgaccacg ga
#tgggttgg  16200
ccacggacgg gtcagggtat aatgaagaca attgagaaat gagcaggaag ga
#caaaaata  16260
gaattctagg tgaaaaaagc cctaggtgtc tttttattta tttctagaat ta
#aatacata  16320
cttttttacc ccatagactt cactctgttt ggtagccctt tacttttacc at
#ctgccctc  16380
ggctcagaat ggaggcaggc ggagggacca tatatcctgg ccgtctgctc ag
#aggccagg  16440
tggggcacag tcactctttt ggcctctgat ttcctagaac tgtgcttcca tt
#tcatgact  16500
gctcccaggt cctaaggagg ttggtccgag gaccgattct ggggttgagg gt
#gggcagag  16560
ggaaggggga gtcaagactg tgtcctggga gctccagcat ccggtgggaa cc
#agggctgt  16620
tggagatgtg gcggagctgc aggtccaggc ggctgtggtt gccatggatc tg
#gacctggc  16680
ttgtggcagg agaggaggca attttgtgcc cctaattcac tattcctctt ct
#ctctccac  16740
tgcgctgtcc ttcagaactg tgaccctttt ggctctggcc tcttgaactc ca
#tcccaaag  16800
ggaaacaaac gggccagccc aagaacagtg cacagtcgag gaagctagag ca
#aagagcat  16860
gtggtcagcc ctgcctgtgg tcagactcgg aggcactgaa ttcagatgga gc
#atttggtg  16920
ctaggggcca gtcatgccca gtttcccctt aatagctagt atattctgtc cc
#aggagtta  16980
aaagcctgtt ggaagagtga accctgatat aaactctgga ctttgggtaa tg
#atgatgag  17040
tcaatgtggg ttcatagacg gtaacaaatc caccactcta gtgggagatg tt
#gatggtgg  17100
aggagactgt gcatgtgggg gacgtggggt atttgggaat gttctcgggt at
#ttgggaac  17160
accctgtact ttccgctcaa ttttggtgtg aacctaaaac tgctctgaaa at
#aaagttta  17220
ttaattaaaa acaaacaaac aaacaacaaa atgcctgttt gggtgtaagg ca
#cactgccg  17280
aactccaaac agcgctggga gtgtggccag tggtggggag ttgagaggag ga
#gacgctgg  17340
tgtgaggtct gaggtctgaa tgaagtccgt tctacctgtg atctgcctgc tc
#cctgctct  17400
caagtcctct aatgaataga ctctgtcttc cttcgtgctg agctgcccca gc
#agtttcga  17460
tcatagtcta gcattgtggt ttagagcagc acttctcaaa cttttatgtg ct
#taagactc  17520
acgcagggat catgttaaaa ttcagattct gattcagggg gtctggggta gg
#acctgagt  17580
ctccagctga tgctcatgct actggtccgc atgcctgtca atacttggag aa
#gccaagtt  17640
ttgcggcttc ggagtcgcat ccagatttgg ggtttgaatc tgggatttgc ta
#attagtaa  17700
ctgtgacctc tggcaagtta tttaactcct ctatgcctgc ctctgttttg tt
#atctgggt  17760
cccttcgtgg agttgttatg aaagggttca gccaggaaag ggggctagga gg
#gagatgat  17820
gaaaatggag attccagccc ctagaagtga tctcttcaag acccccagcc tc
#gactcagt  17880
tcacaagtta ttcaagcctg accatttacc cttgagccca gtacccattc ag
#ctaacagt  17940
aagtgtagca aagaaacggt tgcaaataaa aagaaacatt gaatcatgac tg
#agcagttc  18000
ctacatccct gcccccatgg tgggggtggg gggagccctg ccacagtaag ct
#cttggggg  18060
gcagctcagt cccccacaag cccccatggc aacaggacct ccttcccact gt
#gttattgc  18120
tgcagatatt tttaacagca acactttttc agtgcttttt ggagaaagat tt
#gttagtta  18180
aaatgtggca tattgttggg tggtttttaa agaattggaa atagccacaa ca
#tttgggtt  18240
gtggctatct cagtccttga agacatgaaa tatcaagtaa aggtttgtag gt
#gttttggc  18300
ctgttctgtc ttccacggtt tttaaagaac agcaattagg tttgttgctg aa
#atgcagta  18360
aatgctttat actcctttcc ccagatcttc ctgtctatgg acatggcctg gc
#ccttgttg  18420
gccttcatgc cctgtcttta ctctggaatg ggctgggtgt cagattattt ta
#ttccacgc  18480
atccatagtc cctctgctcc tgcctcacag catgacacag ttgtgcttag tt
#aacgcatt  18540
tgtgtaattg ctggtttaaa gcctgtcttc cctcttcgcc tggcagctcc ag
#gtggcagg  18600
gccggctcct cttcttcaca gccacatcca tggcatgtac agcctcgcct gc
#tccggggt  18660
agctgcccag tggacattgt cgagccagtc agaatggcca caggtagtgg gg
#acagattg  18720
gagctccttt gcctaagaat ttgagaaggt gactcccaag caactctgca at
#atcaggaa  18780
tcttgatgtt ggtttgtctt ggcttcaagt cccggttctg ccacttagtg tg
#attttggg  18840
caggtttctt atggagcctc agtttcctct cctgtcagat ggggttattt at
#atgtaagt  18900
agctaccctg cagagctggt gtgagggttc aatacagtaa tgcacgtgga gc
#ccatggaa  18960
cgatgccggc acacggacag ctcaactaag tgttagttgt tagatttaga tt
#gttattat  19020
cagaatctga tggggtgcgg tggctcacag ctgtggtccc agcctctcag ga
#ggctgaga  19080
caggagatgg ctcaagacca ggatctccag cccagcctgg gcaacatagt ga
#gaccctgt  19140
ctcttaaaaa aaaaaagaaa taatgaatct gctgttgcta aataggcact ta
#gaatggca  19200
cagtcatttc tcctcttgtc ttcagtgtcc tgttaatttc tttacaaatt aa
#aaaaatgt  19260
cgatagcagt cttattcaga tacagcttcc tccatccctc cttgtcttgg ca
#ggtgcctt  19320
gctctggggc acacatcaaa gctgttctct ctgctgggtg gcctagaagg at
#tagtcttc  19380
ctttgctgct cctttcttct aattcccttc cccggcttcc tcccacctgg gc
#tctgtgtg  19440
tggccttcct ggagaagggc agacgccaat gactccatgt ctaggcagag gc
#ctgggtgc  19500
ctgcacttct tgccctgttc ttggccttgc tgtgctgggc gggggcaggg tg
#gtgtgggg  19560
catggggtgg tgttgggcat ggggtggggt tctggctgag gcagggctca gt
#gccaggcc  19620
caggcagagc tgagtggctc cacttctctg agatggttgt cagcatcata cc
#tgctgctg  19680
tcccgttaat tccccatgct gctgctgtta gtcacctccc taatggagct gg
#tctgtagc  19740
ttctgggaca gctgatttcc aggggattat ttgtattaca cactttaatg ct
#ttttaata  19800
gcaaattttt aattaaatgg aaagtccttt tggaagcgag ggagcagcag ct
#gcagcaag  19860
actcagcgtg aggcaccgac ttagaccaga ggtgcgcaag tgagtggggc gg
#aggcaatg  19920
gcaggacttc gagaggactt gattgagtgt atatggagtg tgcccaggct aa
#tttttatg  19980
ggaggaaggc aggggcctgg cgctggctcc ttcctcctgt cctaaaagcc cc
#ctctgtca  20040
tctgcaggcc tagggaagca tcttctttgc ccaggagaga atgtatattg ga
#tatataca  20100
ttatatccaa taatgggagg gatattggaa gtatcacctg cctttgatcc cg
#ttcccaga  20160
aatactgaga ttgggatggg atttttgggg ttgagtcact agattagatc aa
#atagtgta  20220
ggtaatggga tgcggaaaca gtcttgaggc cctggctccg gccctggcag gc
#ttcggagt  20280
cctcagtcat caagggagga gaacaagggg gctatagtgg tggttcagtg cc
#tcgggact  20340
gtgccggctg ggttgtatac tttgctttct gaatgatctt gcttcgtggg ga
#ggggacat  20400
agggaagcac ctcagccctg aggaaacgtg tgacactgga aatggaagca gc
#cagggccc  20460
acccaggaag agacatggcc atttctttgt ctcctagcac tgaactggtt ag
#tttggtgt  20520
caggccattc ctgaagtgct ccatgaggtg cacctgtaac tgccaaggct tg
#gagcaaag  20580
gtcaaaccga gggaggcctt tggaacagaa gttccccatc aagagagttc ac
#gtgagggg  20640
agggacagga cagtcagcca aagcggagtc gtttctgcat tagaatgatg ct
#caggggtt  20700
ggcatttaac ccagaggtgg ctttgtgggc agaaacttga agaggagacc tc
#agaagact  20760
tcaggttggt tttttaccca agagctttgg aggcggggag cagggaggga tt
#ccgcctgc  20820
cagctttttc tcgcagctgg tgcatcgccc gagtcttctt ccagtggcac cc
#tcccggac  20880
ctgtctgcga tgctgcttta gggacatttg taagtggtct ttcttttgga tg
#ccagggct  20940
ttgttgcctg aatatggggg ctgccccaca tttcttaagg gaagcagtgg tg
#tagaccac  21000
agtctttgga gtcaggtagc actggattca catcttgacc caccacttag aa
#gctctttg  21060
gcctttgtta agagactttg tgtccctgag cctctggtgc cctcatctgt ag
#aatgggaa  21120
taacattcat ctcaggtggt cgaaaggaat aataaactcc tcaaaggcag gc
#actctgtc  21180
tgttcctcct gaatcccgct gcctagcgtg gggtccagca catagtaggt gc
#ttgataaa  21240
tgcttgcaga atcagtaatg tatgcaagag cctagcacaa ggcctggcat ag
#taagcact  21300
taataagctg ttattgttgt cattgcctga atgtgtgcgt ggccttccag gc
#tcaccatc  21360
cattatcctg caccacgtgc cttcctgctg agctctgcct ttccaccttc tt
#ccccaccc  21420
cttagttctg ctcccattta ctgctctgga agagctctct ggctttccca tc
#tggtcatt  21480
gttgtcccct gccgtcaaca ttgctaggtg ctgctcacgc tgcatctcac ca
#tcgtgcat  21540
catatcccag gaccaccttc tcggagacca gccctctggg aaggttccgg ct
#tttctcca  21600
tcttgacttc ttagccatga agcttttctc tcttgcctga gtctgaggtg gc
#aaccagag  21660
cgccaggctc tggctcccag gctgcatagc cttgcactgg ggggcactgg gc
#acgtcgcc  21720
acttcccccc actgctcctt ctggagagcc ctgtgagccc gacaggatgg gg
#caggggtg  21780
gggctgctga ggagaagcct aggatttcca agttttctct ctgttaatct ct
#gtccccat  21840
ctcctctctt gcagtgcgcc tccatgacag tatttctgaa gaagggtttc ac
#tacctcgt  21900
gtttgacctg taagtgccac tttctgaggg tgtgggggcc tttccctcta gc
#tgactcaa  21960
aatgaaggct caggaagggg cctaaacagg ctctccagcc tccgcccagg gc
#cccctcct  22020
ttgtccgagg gaaaggattt gactggggca gattgctgcc cccaccaagg gg
#gtctccat  22080
gttcccccag cgtcccccca gggctctgaa ccccaggaca gcattcctct cg
#cacttctg  22140
ttcagcagca cgccttgcac agatgccttt gtcttgtttc tcagtgtgct gt
#ccttagtg  22200
aagaaataaa agacagctct ttgcatgacc ttaaaaatcc tgagaaatca ga
#ggtagctt  22260
tcattagtcg gaaaccaggc tccattggat tgggtctctc ctccacgttg gt
#tgtggttt  22320
aatgtcttaa aagtggctct tacctcctgg acactcctct ccaggattct ca
#gggttggg  22380
tctctgtgtc attggtctca ttactcttca acttcagtag tagctctgtc ct
#tcctgggc  22440
agcgatattt tagtgtttat gttggtctca aagctgtgac ttttggggta gg
#ttgactgt  22500
tttctcttag atccctgtat cttcatctct gcctgactat tagtgaatct gt
#gcattttg  22560
gaaaaagaaa tgtccggaag gaagggacgg cccatgatac ctcaaggaga at
#ccgggtgt  22620
cactgaagga tcgagtgtgt tctgagctct cagatgaaat gcatggggag tt
#gggatttc  22680
tctgaaagcc attctacagg gtgaccctgt ttcttcttgg acattggggt tg
#gacaaagg  22740
accctttctg cctctgaccc tcttcttccc gttggttgca gtgttaccgg cg
#gggagctg  22800
tttgaagaca ttgtggccag agagtactac agtgaagcag atgccaggta gg
#atgagggc  22860
ccgagagttc aaatgtagct ctggagttta ggactgaagg aagtcttggc ca
#ccttcggg  22920
gtccagcatt gtacctgttt gaatagtctt tggggaagat cagaatagct ct
#tgtctgga  22980
gaaagattct gttgagctgg gctagggctt gcatactgtg ggtgatatta ga
#agttaaaa  23040
attcagcact tcctaaccag gcgcagtggc tcatgcctgt aatcccagca ct
#ttgggagg  23100
ctgaggcagt tggatcacct gaggtcagaa gttggagccc agcctggcca ac
#atagtgaa  23160
accctgtctc tactaaaaat acaaaaaaat tagccgggtg tggtggtgtg tg
#cctgtaat  23220
cccagctact taggcggctg aggcaggaga atcacttaaa cctgtaagcg aa
#ggttgcag  23280
tgagccaaga tcatgccact gcactccagc ctgcgtaaca gagcgagact at
#gtccccct  23340
cccccccccc cacaaaaaaa atcacttcca aatgaatgtt ttacaaagct tt
#tccaagtc  23400
tcctttaccc tgtgacccca gaaatacttt ttttttgcac taccatgtac tc
#gccaccat  23460
gcccaatgtc cccctctgcc cttttctttc ctttgacaaa ttctggtgtg ct
#caagccac  23520
tgtgctgagg ctctggcatg atccagaggt gcagaagaca tggtttctgt cc
#tgagggag  23580
tggagagttc tgggctgata atccaaccat agagccccgg gagctttcag cc
#tctgtcac  23640
cttgtcccta gaccaccatg accagccttg ccgtggggct cctccaactt ga
#ggaccgtt  23700
ccccggccac atgcctcagc ctctgccctc cctggaatcc ctggtgcctc cc
#tcacccac  23760
gctctcaggt gcctgttcag cctgcctttc ccgccttggc tcttccccca gc
#cttgcttt  23820
tctcgagggt gatgtcccta caacctggtt ttgatcatcc tgcctgcagc tt
#atctggct  23880
tatgtggcag ctctggctgc ttctggagag tgggggagtg cagcttcctc ac
#gaatttct  23940
caaccttgag aggccaatgt ttgctgatca acttcagatg cttcagcctc gg
#gaagaatt  24000
ctcaagtggg gagatgaatt ccagtgccag caggggagga cgaggctctg gg
#acggagga  24060
ggcagtgatg gctcagggag cctgcgggga ggagggagag ctatagggag gg
#ggccctga  24120
gggggggtga ctgtaccagt gggcttggcc tggctctgct gggacacttc gc
#acttttgc  24180
catttttggc cagaaggcgc tccctgctag cccggctctg ttctaattat ac
#atctctgt  24240
ggagactcgc ctctatagct cagtcttaaa gtttctgtgg cccactcttg gg
#ctgtgtcc  24300
tatggggagg cccgagtttc agcccccagg gacccagtac gaccccttgg tt
#cttgtggc  24360
atccccagca tcagatttta ggaatagtaa gtccaggcca cccagcccca ta
#cactggga  24420
tgctctgcag atgtgcttaa tataccagat agtgcctgat gacgggggtc ta
#tattctag  24480
gccaagttcc tcagccttgg tgctactaac gttttaggcc aggtacttcc tt
#gttgtgag  24540
gcctctcctg tgcattgtgg cagacattta gaagcatcct tggcctctgc cc
#accaaatg  24600
ctgggagcac ccctcctcca gttgtgacaa ccagaaattt ctctaggcat tg
#ccaaatgt  24660
cccctgcggt gggggggggc gggcggcaaa ttcattccca gttgaaaacc ac
#tgctctag  24720
actgcccccg ctccctgtca ggagtttgat gacagggatg gcaggatggt tt
#gctatgtg  24780
gacagtctga tttacgtgtg tgactgtggc tgggcgcagt ggctcacgcc tg
#taatccca  24840
acactgagag gccaaggtgg gtggatcact tgagctcagg agttcaagac ca
#gcctgggc  24900
aacatggtga gaccttgtct ccacaaaaaa atacaaaaat tagctgggca cg
#gtggctca  24960
tgcttgtggt cccagctact ggggaggctg aagtgggagg attgcttgag cc
#caggaggt  25020
caaggctgcg gtgagctgtg ttcacgacat tgcactctaa cccaggcaac ag
#agtgagac  25080
cctgtctcaa aaataaaata ataaaataac tttgggtttt tttctctacg ca
#aaatcatc  25140
agaagtgctc cttaaatgcc ctgtttggaa gctcttaagt acattgtttc tt
#aaaggtat  25200
ctttgtactt gttttagctg ccttactgga tgccagacct cagggcagct at
#tgggtctt  25260
gtccatcttc attatcctag gcactcaata aacatttagg gaaatgaatg ag
#tgcaccca  25320
ccgccaaagt agcttaggtt gtttagttgg actctccttc ctaagttgcc ag
#cacaagct  25380
tcttctccaa gaacaaagtt actgtatgga gaaagagaaa gaaggaaggg at
#tggatgct  25440
ctcttcttcc tcaggattct gggctgtctc ctgatctctt ggaaatgagt tg
#gttgtgtt  25500
agacctttcc agtcaaaagg gggtgagagg aacccgttct agcggtgatc ct
#agaaaaac  25560
cattgcatct gcctgggcct cggtttcctc tttctttaaa taggttgaac aa
#gatgatgt  25620
gcagagtcta aggttccagt ggccgttaag tgattctctg tgaatccgtg gc
#cccttgtc  25680
acatgcctta gtctgcagca tgtggttgtg gatgtggatg aggtggttta ac
#cctgcgct  25740
aacatttctt ttccttctgc ttttttagcc actgtataca tcagattctg ga
#gagtgtta  25800
accacatcca ccagcatgac atcgtccaca gggacctgaa ggtactaccc ag
#gctcccct  25860
ccgtgcctct gctcatgaag tgttggcgcc acctggtgcc agatagtggt ac
#tgcgtagg  25920
cccaaactag gcttcctctg ggctgcaggg tgggtgctca caaggttctc tg
#tgtttctt  25980
ctgcagcctg agaacctgct gctggcgagt aaatgcaagg gtgccgccgt ca
#agctggct  26040
gattttggcc tagccatcga agtacaggga gagcagcagg cttggtttgg ta
#agggtgat  26100
cctgtcttcc cggaatgcag cccccgccct tcctcctctt cctgatctgc ct
#tcctctat  26160
tagaactaga agccagaccc ttaatggtcc tggcctccga gatctctctt gg
#ccgtacgc  26220
gactcagtac agtaagtcta gctgttgtca gcactgcttt cttgctgcct gt
#gggaagga  26280
gctggagttc ctggtaggca tacggctttg ccgtctggtt cagattccag gc
#gctacaag  26340
aagcccagcc tgtcagctct tgctgcccat gtgctgagag tttatgtagc aa
#aagcagca  26400
ggaataagat gggacttggg ggaaatggct ggtgtggatt taacgagaga ga
#aagtgggt  26460
tcagtatgcc tctgccctct cttttgctac aggttttgct ggcaccccag gt
#tacttgtc  26520
ccctgaggtc ttgaggaaag atccctatgg aaaacctgtg gatatctggg cc
#tgcggtaa  26580
gcccattcca cgctctcagc ttttcgctgt taagggccct caacttccga tg
#atggcaag  26640
aaagaggcat cgctattcct tgcaggtcac acacgtgcct ggtgtatgtg aa
#attatggt  26700
gtttgcccct gggatggctg ttcccatcac accctcctcc ctgcgtactt ct
#gggatgac  26760
attgtatcct tcttggagag ggatttgccc acgccttaga ggatgggttg tg
#cctaaaga  26820
aatccctggt gtgacttggt gacgtgaagt gtgaggcata gcaggagggg ct
#ggtagcat  26880
agcattatcg gctggcatcc acttctgact ctggtatggc ccctgccttt ct
#aggtggct  26940
ctgagccctg catggttttt cttggttcct cagggaagta ggcgactgac cc
#ccatgacc  27000
tgtgtgttct gtctcgtagg ggtcatcctg tatatcctcc tggtgggcta tc
#ctcccttc  27060
tgggatgagg atcagcacaa gctgtatcag cagatcaagg ctggagccta tg
#atgtaagg  27120
accagagagc cgggcagcca ggccaggaag ggcagatgtc ctgctcctcg gg
#ctctgtcc  27180
aagggagcag gcttgtttag tgtgtcacgt gatacggggg tgtcagggga ct
#ttgaggac  27240
ccaggaatgg gcatccaggg cccaattctt gccactctat gtcccaggga gc
#aactttct  27300
tttgcacagc cttcttcata actaaaattg aggagtccac tgaagtcctt tg
#atctttac  27360
ttgcaaagaa tggagcggcc tcattggtgt gctgtgtaac acagggacaa aa
#ggcctgga  27420
gactccctcc actgcagtgg caccttggac acattgctga gcctctgttc cc
#tcctaagt  27480
atagagctgg gcttaaacca gagaatgttg gagtcccctt cccgctctaa tc
#tgatgttc  27540
tggcattcta aacatgactg ttctgtctgt ctttccaagt ctttaagttg ac
#acaggttc  27600
tggaatagcc gcagggcttc tccaactctg ccagtcacag ctttaggtac ca
#cagagtat  27660
cccaattaca ggagttgagt tgaagacaga accagtgttg cagggtatga ag
#ctcaccaa  27720
taccacattc ttctccctat tcctgctcct tagttcccat caccagaatg gg
#acacggta  27780
actcctgaag ccaagaactt gatcaaccag atgctgacca taaacccagc aa
#agcgcatc  27840
acggctgacc aggctctcaa gcacccgtgg gtctgtgtaa gtgtctttgc ta
#gtggccaa  27900
ggagctcagg ggtgtcagcc ttctgtgtgc cctcggcacc accccctcct tc
#ttaccagc  27960
agagattcat tctgggcccc aagcaataac tgagcaggcg ggcagaggac tg
#ttgagggc  28020
cagggtcaat aaatgtcacc agggagactc gggaggctga tggggctggt gg
#gccactgc  28080
tcctctctcc cccactcatg gctgtcaggc tgggattggt tctgttcttg ga
#tgagggct  28140
caggttgacc cttgtggact ccaggtagcc ggtgatagaa agcagctggc aa
#aacccaaa  28200
gtgaattccc aagctggggt tcatactcag atctcaactc cactggagtg gt
#gaccaaga  28260
tccaacaaat caacagaagg ggtttctgag tcattaaaag cataaaagct ga
#ggcataaa  28320
gcttctgcgc taaagtccta ggagagtcct ctaggctatc agtgtgggtt ga
#cgtactct  28380
gtttttatac acaattcttt caagctgaaa tatcaacttt cagacaaaga ag
#aggatttg  28440
gtagagttag gcatcttgac aaccacgagg cattatttat ctgtccattc tg
#tgtttatt  28500
aaatacctct ttggtgctgg ttaccgtctg ggtgctggag atacaaagat ga
#atgaggca  28560
tggtccctgc cccaaaagat catctaggga gacaggcact caaacaggca gt
#catgttac  28620
aatgtgacaa gtaggtacaa gaatctaatg agagtacagg agctcctact gt
#tcctggtg  28680
ggtggtgggg ttactgaagg ctgcacggag gaggtgacac ccctgtgctt gt
#tcttggca  28740
aataacgagg tcctcagaac gttaacctgc agacagagtt tagcacagtg ag
#aggttatg  28800
ggaaactatg gtgagttgaa ggaatgttga gttgtttggt tgtcgatgag gc
#tgcaaata  28860
tcagaatgca agagaatggg gcaaaagatt ccctgacata caagtttctg cc
#tcaggagt  28920
ttggatttta ttctgaaaac atagggaatc atttaagggt tttaaagaag aa
#tgaaattt  28980
gcatttaaga acactttgga agttgtgagg aaatgaattg ccaggcatgg tg
#gcatgtgc  29040
ctgtagtctc agctgctggg gatgctgagg caggaggatc ataagcccag ga
#gtttgagg  29100
ctgcagcgag ctatgattgc acctgtgaat agtcattgta ctccagcctg gg
#aaagatgg  29160
tcagacccca cctctttaaa aaaaaaaaaa aaaaaagaag ggaattgaaa at
#ttttaaaa  29220
gaaaagggct ggagacagag agctcaggaa gcttttttaa tagttggaat ag
#tctaagca  29280
agaccaggtg aggtctcagc agagggtaag gatgggggaa tgtgcagtgt gt
#tgaaattc  29340
aagagatatt tgagagaacc taaaggattt aattctctcc agttggattt gg
#ggggagca  29400
aagaagagag aggccaggtt tcaagttgag cggagagttg taccctcact ga
#cccagaag  29460
aaaaccagag gaggagcttg tttgtgagac aagacgatgg ttttctcttt tt
#tttttttt  29520
ttttgagatg gagtctcgct ctgtcgccca ggctggagtg cagtggcgcg gt
#ctcactgc  29580
aagctctgcc tcccgggttc atgccattct cctgcctcag cctcccgagt ag
#ctgggact  29640
acaggtgccc gccaccacgc ccggctaatt ttttgtattt ttagtagaga tg
#gggtttca  29700
ccgtgttagt caggatggtt tcgatctcct gatctcatga tccacccgcc tc
#ggcttccc  29760
aaagtgctga gattacaggc atgagccact gcgcccggcc aagatgatgg tt
#ttcatttt  29820
gtgcctgctg agtctggcaa cctccagcca gacacattca gtgggtggtt ag
#aaatatgg  29880
tcctagagat tagaaaagaa gctaaaaatt ggaaatccac attgtagtca tt
#tctgtgta  29940
gttggtagtg aggctgtaga aatagcctct tcctatgctg tagatgggcc tg
#ttcctatg  30000
ctggttgagt tcttacggtg agcttctatt ggctgtagta gagaagagac gg
#ccactaca  30060
caccagcatt taatgatagg gagagttagg gggcccagca aagagcactg ag
#agtgagac  30120
cttccagaag acccagaagc taagaaacag ggggtctcag taagggagcg tc
#aggaatca  30180
gatgcagaag agtccctgat taagttgggg aagaatcccc tggctctgac ca
#ttagatgc  30240
cattgtttca tcatttcact gagacagtgg agagaaagat gaaaccctgt tt
#tcagtgag  30300
acgaaaaggg agtgagggtg aggaggggca tggggagcta ggcattgagg tg
#ggaaataa  30360
atggtgatac ttagattaag atgggccagg ggagctttta atgtaaggct ca
#cacctgta  30420
atcccagcac tttgggagac caaggcaggc gatcacttga ggccacgagt tc
#aagaccag  30480
cctggccaac atagtgaaac tccatctcta ctaaaaatac aaaaaattag ct
#gggtatgt  30540
tggtacacac ctataatccc agctacttgg gaggctgagg catgagaatc ac
#tagaaccc  30600
aggaggtgga ggttgcagtg agccaagata atgacactgc attccagcct gg
#gtgacaga  30660
gggagactct gcctctaaag aagaaaaaat ttctttttaa agattatatt gg
#tcaggagc  30720
ggtggctcac acctgtagtc ccagcacttt gggagaccag ggtaggtaga tc
#acttgagc  30780
ccggaagttt gagaccagcc tgggcaacat ggcaaaaccc catctctaca aa
#aaaaaaaa  30840
ctttaaaaat tagctggttg tggtaacgtg ccttagctac ttgggaggct ga
#gatgagag  30900
gatcacctga gcctagagag gtggaggttg cagtaagcca ttattgtgct ac
#tgcactcc  30960
agcctgggca acagagtgag atgctgtttc aaaaaaaaaa aaaaattttt tt
#gtttaagg  31020
agaggcttaa ctataatcta tagagaagaa tctagtccag aggaaagagt tg
#aagatcct  31080
tgctaattga ggaagcaaag gtttggacag cagaaaaaga gagggggctc ct
#gagccaag  31140
ggcagggggt ccatcccggg gatgaccatg atccccctga gacttctatt ag
#tgtggagg  31200
caggtgaaga tcggcttgtg agtggaagtc tgagctgaaa ggggttcttg ct
#gatgacct  31260
ctcattttgc ttttggagaa atttacaccg aggaggaggt aaaatgagag ac
#ttggggaa  31320
ggtagagaag gtggggagag ttgcctccgg acctggaaag agtgggccaa gg
#gtgaggga  31380
aaggatgcga ggaggccccg tagtgttggt gggcacctgg ctgcaggtgc ca
#ggatttgt  31440
ttttctgaca ggctggtgaa gacagcaaca gcaaggggag agggcaagca ac
#ctgaaaca  31500
ggcacccaag aatgggggaa atattctgtt ctggggtcat ttttgcaggc cc
#taccctct  31560
gcagtcccgt gtgtctcgag cccctgagga catcactata ttctgaaatt ac
#ataatgat  31620
gctggtattg acagctgagt cattgaggaa gtgtagactg tgtcccatgg ac
#tctgttta  31680
aggaggccag gaagttagca gtaaatacat tgaagacaaa tttccatcca aa
#aaaggcgg  31740
ggcacagtgg ctcacacctg ttatcccagg actctgggag gccgaagtga gc
#agatcact  31800
tgaggtcagg agttcgagac caccagcctg gccaacatgg ccaaccctgt ct
#ctactaaa  31860
aatacaaaaa ttagctgggt gtggtgggat gtgcctgtag tcccagctac tc
#gggaggcc  31920
aagacaggag aacctgagag gcggaggcta cggtgagccg agattgcacc ac
#tgcactcc  31980
agcctgactg acaaagcgag actccattgc aaaaaaaaaa aaaaattaca tc
#cagaatga  32040
tgaaaagaat tgatgcttca aggtgacgat ccttagcttc tgggatcatg gc
#ttcattca  32100
ggaccttgct gggggtgtgt ggagaggggc tcttggaagg aaggaatgtc ct
#ctgtagag  32160
agcaggaacc ctgccgttct ctcgctgctg agcatctgga acgcagtagg tg
#ctcagtaa  32220
acagctgcct aaggagtgac tgaatgagga tcacagcccc cagggtactc tc
#ctgttcgg  32280
tagcctctgt ttcccaagga agaataggac ggtctctcag cagcccgtct ag
#catccgtt  32340
atggtgttct cacgttcatg ttgtccttat gtaaccttga gtttcgggta gt
#gcttttat  32400
tctaaaagcg ttttcacatc tgtgacctca tttcatcttc agagcaactc tg
#gggtggct  32460
gagtgcatga ccctgtcctg ggcatggtat cggtgccagg actgtgggag gc
#gcagagga  32520
tctgggctgg ggctcatagc ctgtctgttt ggtttctagc aacgatccac gg
#tggcatcc  32580
atgatgcatc gtcaggagac tgtggagtgt ttgcgcaagt tcaatgcccg ga
#gaaaactg  32640
aaggtgagtg tcgtttctag gctgccagcc tccttgacat catgccttgc ac
#cagtgtgg  32700
ctcctgcccc atttcagaag gaagctcccc tcctggctgg agctgggctc tg
#aaggttgt  32760
acatgtcaca ggggaggggg cccagaggcc tgatgtcttc aggctctagc ca
#ggacctgc  32820
ctttgcctga gaccagcctg cccttttcta gggtctcagt gaattcacag ga
#ccttcctc  32880
tttccccagg gtgccatcct cacgaccatg cttgtctcca ggaacttctc ag
#gtatgttt  32940
tcccagctgt gtactttgat tatgccgagg tgagtggatc aggaatgggc tg
#ttgccatc  33000
ccgggcaccg ctgggtttcc tcggcgtcct gggccacacc ttgaccaggg cg
#agtgagga  33060
tcctgttttg aggggctgct gctgctgctg agtcctgctc ctgagattca gg
#gggctgga  33120
ctcacatttg tgaattgttt cctagaactt cccaaggagt agcctgccca ac
#ttgctatg  33180
taccttgttt ctctggattc ttatttaact ctctgaagac tctcagcact tt
#acagattt  33240
tagccattct aggatcttgg aggatgtgct gggggaagaa aagagagatg ag
#gtacagtg  33300
agtcttctca attgccaaat tgccaccatt catttgcctg ctgggacgat ct
#cttacttc  33360
attttgtcca agtggagatg actaatagaa attattccag atgtttaaac ct
#tttgtggc  33420
gacttgtgct taaaatagtc cctgagatac tagctataac agtgaagaaa ta
#aagaccag  33480
caggagagag ggaaaggaac ttgcttaaat ttgcataaag aattgggaga gg
#tgggacca  33540
ataatttgta aatcatactt gacatttatt tttaagatgc aagacactcc ac
#tcccctct  33600
tgcccccacc ctcaccccaa cccctattat tgtttgcctt caattgggaa gc
#acagtggc  33660
ttttttgtga ggaaaagatt aatgtcgaga ctgaagacag agagggctct gc
#ccagcttg  33720
ccatctcccc cggtcctccc tccctctaac cccttgcctc actgttttgg tt
#caagaccc  33780
ccccttctcc ttcccataat aagactccct cccttgcttc ccctctgcac ca
#ccatggaa  33840
agggggttgt gtgggagcct aagccaccac tcagtgggag ccacttctga at
#acccgtcc  33900
tgctgggctc gcctgcgctg gctccaggta acgccagggc cttggctgtg ag
#gatgctgc  33960
aggcagggag cctagggctt cgtggtgtag cctgagagcc atggagctcc gg
#aaggccag  34020
ggctggatag tgagcccggg gctggtggtg ccctgcccta ggccttctcc tt
#tgaccctg  34080
gtttggggct tgatcttgtg tcatgggtac ccacgacggg catactgtgg tg
#tggctcca  34140
cctctcgcag atgggaacag ggaagcgtgg ctggctgcct ccggtggagt tg
#caactgta  34200
gtcccacact tgcttcttgt gctttaatga cgcagcttct actttttggg tc
#tacgagcc  34260
tttccagagg acattgaagg gcgtttcggt gttgccccta gagcgaagct ct
#gtcctctc  34320
tcccctctga gttgaagaaa tgtgaagaca gtctgctgct tctcttttag cc
#cagccagt  34380
caatagcaag ggccctgtct tgcagccccg ggcctccaca tcagcctccc cc
#tccatttc  34440
aggaaactgg catcctggtt tcaggaaatc gggtgttagg acaaagcatt tt
#attcatcc  34500
ctgtagagcc tcctgttctt attggccaga cctagactgg cctttgagct ca
#ctttgcct  34560
tgggtcagag gagacaaaca atgttgcaag cattccagga tggcctcttc tg
#ccctgact  34620
ctgggacagg tgaggacaga gtctgtccgg aagcttctgc agaaagaggt gt
#ctatggat  34680
gcaatcaaga aggaagggca cctgtgtgtt tctctagggc tgttttttga gt
#tgacctcc  34740
aataggagat gtggcttatc ctggactcta gcagtttggc taacagcgaa tc
#ggggcctc  34800
cagagtgtat tgcttcagca gcctttgttt tctttctcag ggtttatttc tt
#gggcacct  34860
ttcacctcag cacactgtga cacacagact gagaatgctg cctctctcgg ct
#acctccct  34920
taagacaggg acctgtgtct ctgaggggtt ggggggcatg gagctggggc cc
#accagtaa  34980
acttagctgc acaagggcca cagaccctcc ctgggacccc cacgccagtc cc
#tctagtgt  35040
gtgggatgta gagaggggag agggctgctc tgcgcccccg gcactctcat cg
#tgggctca  35100
tttagcttct agggagggaa ggactagaag ggagggcgtt tcatcacagc ct
#taagctag  35160
ggccgggcta cctcagaagg ggcacctgcc tctcaccggc tcaggcattt cg
#ctgtggac  35220
cctcctccgg agggggtcat gagacaggca ctgcagccct ctccatctgg tg
#gggacgca  35280
gtgttcccta tgccctggcc cagcccggtc ttcccaggcc cccagactgc tg
#cagggctg  35340
gctgcgccta cctcctcagc ctgcccctgg cgctccgctc ccccagctcg gc
#tggcttgg  35400
ccacgccgcc tgggctgcgc ctcgcgctgg ggcatgctcg ctgctgacgg cc
#ccgtggct  35460
ttgcggggct ctgtgcactg agagactgta tcccctcagt tggcaggcag ag
#ctccgccc  35520
ccgcctcgcc tgccgcgagc gccgccggcc tggccgggca aggtacgtgg ca
#tgagtcct  35580
ccccgaccgc ctgcctcggc cccctgccac cccaccagga gggccagcat gc
#cgggccca  35640
ctcaccaggg aggcgagtcc catgcttgcg ggctgagatg ggcatgccag ac
#agactacc  35700
taacttggca tctgcaagcg catcgttgtt atggagcccc ctaaccagcc at
#gcatgctg  35760
ggcgcttgcc aactttcagg gggcagtagc ctgggggcat ggagctgggc ag
#cgggagcc  35820
ttgccaagag cccgatgccc tgggagggct gcagccaaca gtgggccctc ag
#agacagtg  35880
ctgggcattg ccctgagctg cccggtgcta ggactagatt tccgcagcac tg
#tttaagac  35940
cccacagagg agccgcgctc ctcaaaattg tgaagtctgg cgcttgctgg cc
#tccaggtc  36000
tgaaaggctc cagagtgcag aagcctcaga gccagctgtt tctgggttca ca
#tcctagcc  36060
ctgccacacc ctgagcgagt cacaccagct ctcccagcct taattcctca cc
#tctccaat  36120
ggggatgata aataacatgg tggtgcttaa gatcaccctg tcgaaggctc tc
#agccctgc  36180
ctgtgcagta cagctgttac ctgggagctc gtaagaagtc ctaatgccag ga
#ccccaccc  36240
cagacaataa aatcagaccc ttagggataa gataggtagt acgctttttt ta
#agctccca  36300
ggtgatccta gtgggcaacc agcgttgaga gctggctggt gaatggaaag ca
#cttagaca  36360
gtaggcggtc aggcacagga gtcagcacat ttaaaaaaca acattcaaac cc
#agcacgac  36420
aagataagat caaaggtctt tttctggagt cagaattctc gtaatggaag ga
#cccctgtt  36480
ctcactggag agagatggaa cacagcttgg ggaggaatgg ctacccaaag gg
#caggaggg  36540
tggcagcaat agtgacaacg atggtggaca cttactcagt acttgctata tg
#ccaggcac  36600
tctaagtgct tttcatgcat aatcccactg gattcccacc actgttttgt ga
#tgtcagcc  36660
ctactttatc ccattttata gataaagaaa ttgaggctca gagaggttaa gt
#aactcacc  36720
aaaggtcaca cagctggcaa gtggtggaac caagatacag acccagggca gg
#cagtccag  36780
gtgtatcaga cagttgggct gattccatct ccctgtgcct cccagactct cc
#tccccact  36840
gtctgctacc ttcctgtggc cttttgtggc cagctggtgt caccagcctt ct
#ggcacaga  36900
gctcatcagc ctggagcgtc accctatgcc tggctagaat ctgtttgaca gc
#tcattatt  36960
ctgccgagtc cttcctgctc acaggtccag agagtggaca ctggggaaag gg
#tggcagct  37020
aggacccagt gaacctggtg aggacctgct cagtgaaggc ttcaaccccc tg
#gcaaaacc  37080
ctcctgtagg tggtcctggt ttctgtgtct gtgtctgtct gtcctctggt ct
#cctgtgtg  37140
aactgtgaca ctctgcttct tgagaacact caggagatgt cttgcatcct tg
#cagtttgg  37200
ccatccagag aacttccatg gcacctaggg atggagccct cactctttca cc
#ctggcact  37260
ctgcttccag gcctgggtgg aagctgtcaa aggcagagtc cccagtgccc ca
#ggcggctc  37320
cagtactgag catggtttct cctctaagtg tcgtgcatcc atgccctcct cc
#acgcagag  37380
gagatcctga ggtgccaccc tgagggctct gacgccactc aagatcccct tc
#ttgctgag  37440
aggctatagg aagtgcctct tttgggggtt tcgggagacc cttggccccc tt
#gtcagaca  37500
cagcactctc ttgtggatct ggctgccgga cttcaggttg gggagagggt ac
#aatgcagg  37560
agacttgata ttcctctttg ttttcacagc tgccaaaagc ctattgaaca ag
#aagtcgga  37620
tggcggtgtc aaggtaagtg tctccagcct ctgaacagac tggcctcttt ct
#ccccgcag  37680
tcactatggg aattcttggc acctggttcc ccctttccca gggaatcttc ct
#atccttgc  37740
tagtctgctt taaaccagat gcctttgtgc tcagaacaga aggttctgct gg
#cctgagag  37800
ggaagtaggg aggtattttt cctggcccta gctggatggg aatgactcag gg
#gaagtgat  37860
ccaaatcata gtttatacca gagctgaatc cggaacctga cttctacacg ga
#tgcttcat  37920
ctccagggct tgactctggg ttttttaggt catttggtta tctttctttt tt
#tccttttt  37980
agagcacaaa tccttttaat caaatgaaag ccaaatttgc ctgagtgatt ca
#ggcagggt  38040
atagggcttg gaacctgaaa ccactctcct tttggtcttt ttccttctct ct
#acaacact  38100
ttcagatccc actgagtgca acagcctcga gctttcttga cgcataggct cc
#tcagaaaa  38160
aggcaaaggc catggtggat cacggcttgt tcccactggg tgagggagct tt
#tcccatgg  38220
gactggggca agaggaggga cctgggaccc accaggagcc ctgctgggaa tg
#gctgcttg  38280
gccaaggtag aggagaggtg actggggcta cccacagggc ccaagacatt ct
#gtagatgc  38340
tttgggggca gaaaggatcc tggggctagg gcattgggta ggagctcatg ct
#atcttgaa  38400
gcctcccagc ttacactcta gactagattt tcactgggcc ttttcccaag at
#cttgtgtc  38460
aacagctgag atacacacac aagccccgtt ccctccccgt tccctcccca ct
#ccctcctc  38520
tttccctcat tctctgcatg cctgcttctg tgttcttccg cccctcgcag gg
#gagcctgg  38580
gctccgcgca caccctctga catggagctg ggggcatcgt gcggtcccca ag
#ctctgccc  38640
ctgagctaca tggatggagc caggtgagga aaaggggcag gtttagttgg ag
#agagtgtt  38700
taataagtac ctgtcagtca gatgtccacg cagcattctg ttctgagggg ta
#cacaacag  38760
aggtgtaaga gggggtgtgg ctttcagtcg ccataggaag ggggccgcac ct
#ggagtcag  38820
ctgagcgctg ctagtggacc cacgcgagat ggtttagtcc aggaagctca ta
#ggagagag  38880
cgtactggag aaagctgcag ggacataggt gagactcact ttgcagtttt ac
#tttctgct  38940
atatgttttc tttaaattga aaatatgggt caggcttggt ggctcactcc tg
#taatccca  39000
gcactttggg aggctaaggc gggtggatca cctggggtca ggaattcaag ac
#cagcctgg  39060
ccaacctggt gaaactccgt ctctacaaaa atacaaaaat tagccagtca ta
#atgaccgg  39120
tgcctgtaat cccagccact cgggagtctg aggcaggaga atggcttgaa cc
#tgggaggc  39180
ggaggttgca gtgagccaag attgcgccat tgcactccag cctgggcgac ag
#agcaagac  39240
tccgtctgaa aataaagaaa agagaaaaga aaacaacatg acatttctat aa
#cttaaaaa  39300
caacaaatta tatttgtatg ggttctctta tacatattga tgttctctgc cc
#agtgagaa  39360
cacagggtgt gtggtagatt gatgtcaaaa atatggttgg atcagtctta tc
#aggcagaa  39420
ttggaagttt ctgtgtcaga ccatgggaaa taccataggc cattgagcag gg
#aagctatg  39480
gtgagagtgc tgatagaaat gatttggcaa gccgggtgcg gtggcttcac tc
#ctgtaatc  39540
ccagcatttt gggatgctga ggcaagaaga ttgcttgagt ccaggagttt ga
#gaccagcc  39600
tgggcaaaac cttgtctgtg aaaaaaaaaa aaaaaaatta actgggcata gt
#ggtgtgca  39660
tctgtagtca cagctacttg ggaggctgag gtaagagaat tgcctaagcc ca
#gggagttt  39720
gagcctgagg tgagccaaga tcaagccact gcactctcca gcctgggtga ca
#gtgaaacc  39780
ctgcctcaaa aaaaaaaaaa agatacctgc tgtgccccta gaagttggga ag
#gcaaaact  39840
taatctacct tttaaggtgt ttacagtggg agagacacaa ggcagctact gt
#ttctatgg  39900
agtctgctaa ggtctcaggg aggtgtgcac ctggcaggtg ctgggggagc ag
#acagataa  39960
acatccaaac caggacagga atcttctgga aggagatggc caggaattga gc
#ttgaggga  40020
gtagctggat tttgctgggt taaggaggag acaggagggg agggatattc ca
#ggcagagg  40080
gaagagcgca tgtgaagata cacgaggttg aaacagcatg atgattctgg ga
#acttcagt  40140
atcttcttta tggctgaagg gaagagcaat tgcataaaat gagacctgaa at
#aaagcagt  40200
gactgttgag gtggagggga gaggatggaa aaggcaccat tacagaacag gt
#ttctagcc  40260
aaactttcta gatactactg gtgtcaaaga tgaaggtcat gtgcagccat gt
#aagattag  40320
cccaaggagc cagctcaaac catgcacatc cagggcccag cttggaattc at
#gttctgga  40380
ggccttggct gggaggcaga atctgtgaat tttaaaaaca ctttcatgaa tc
#caaagcac  40440
atgaaggttt aagagtctgg taaaggcaaa attttggggt tatgtgttaa ga
#aagggctg  40500
gaacaagagt cggcaaagga aacagaggaa ggacagagag gtagggggaa aa
#gagaaatg  40560
tgcagcagct gcagctcttc caggaaccct gaggatgagg gctgggcaga ca
#catcatta  40620
ggtaaaggct ttaaatgagg acgtgcgtgg ggaacctagc cctgcaatgt gt
#tgtgtgtc  40680
tgaccctgat atgtgctcag taaatgagtt ttatgccaca ttcttttgag aa
#aagagctt  40740
caatatcatg gtgggaacca gaggccaatg atcacccaaa attaaaaggc ca
#accgcgta  40800
ttcgcagccg ttgtgatggg aggggttaat atttttattg aaagagtttc tg
#tgacaaat  40860
aatccctctt aaaacccagt agaagctggg cgtggtggct cacgcctgta at
#cccagcac  40920
tttgggaggc cgaggcgggt ggatcacgag gtcaggagat cgagaccatc ct
#ggctaaca  40980
cggtgaaacc ccatctctac tgaaaataca aaaaattagc cgggtgtggt gg
#caggcgcc  41040
tgtagtccca gctacttggg aggttgaggc aggagaatgg cgtgaacccg gg
#aggcggag  41100
cttgcagtga gctgagattg tgccactgca ctccatcctg ggtgacagag ca
#agactccg  41160
tctcaaaaaa aaaaaaaaaa aaaaaaaaaa acccagtaga taggctaggt gt
#ggtggctc  41220
acatctgtaa tcccagcact ttgggatgct gaggtgggct gatcacttga gg
#ccaggagt  41280
tcgagaccag cctggccaac atggtgaaac cccctctcta ctaaaaatac aa
#aaagtagc  41340
cagtagtggt ggtgcacgcc tgtagtccca gctactcggg aggctgagat ag
#gagaatca  41400
cttgaacctt gcggggggca gaggttgccg tgagctggga ttacaccact gc
#actccagc  41460
ctgggggaca gagcaagact ctgtctcaaa aaaaaaaaaa aggaagatag at
#gatcaaag  41520
aaaataaact gacaacctga aaacaaggaa gtagaactgg ataacaaatg tg
#gaaaaatt  41580
tctagcctca ctagtatcag agaaatgcaa attgaaacaa ggtgccattt tt
#ggactcta  41640
gttagtgatg gtagtgaaaa ccagaatggt cctttctaaa acagcctgtg tg
#tcaaaacc  41700
ataaaaatgc ttctacctct ttttaccctg ttaattctac ttctgagagt tt
#ttcctaaa  41760
gaaataattc aaaataggaa aaagctaaaa gcagaaaaat gttgaacatg ac
#attattta  41820
tagctgtgga aagattggag gctgggcaca gtggcttatg cttgtaatct ca
#gcactttg  41880
tgaggccaag ttgggaggat tgcttgaacc caagagcttg agaccagcct gg
#gaaacgta  41940
gtgagacccc atctcttaaa aaaaaaaaaa aaaattagct gagtgtggtg ga
#acgtgcct  42000
gtagtcccag ctacttggga ggctgaggtg ggaggattgc ttgagcccag ga
#ggctgagg  42060
ttacagccag gatcacacca ctgcgctcca gcctgggtga cagagtgagg ct
#ctgtttaa  42120
aaaaaaaaaa aaaagagaga gaagaaaaaa aagattggag acaatttgaa aa
#gccagtaa  42180
ggagccagac acagtggtgc gtacctatag tcccagctac tcaggaggct gt
#cgcaggac  42240
agaattgctt gagcccagga attcgaggcc agctgggcaa catagtgaga cc
#cccaactc  42300
ttaaaaatgt ttttaaattt aaaaataaaa agatttttta aaagccagta aa
#tgactaaa  42360
taattatggg aaatctactt aataaactat tcaaaagtta ttaattttca tg
#accgtagg  42420
gatattttaa gtgaaaaata aagtgcagaa atgttttata ttaagtgaag ga
#agtggtat  42480
ataaaggagt acagacaagc caggcacggt ggctcacgcc tgtaatccca gc
#actttggg  42540
agcccgaggc agacagatca cgaggtcagg agatcgagac cagcctggcc aa
#catggtga  42600
aaccccgtct ttactaaaaa tacaaaaatt agctgggcgt ggtggtgcgt gc
#ctgtaatc  42660
ccagccactt ggaaggctga ggcaggagaa tcgtttgaac tagggagtcg ga
#ggttgcgg  42720
tgagccaagt gcgccactgc actccagcct ggtgacagag caagattctg tc
#tcaaaaaa  42780
taaaaaaaaa aaggagtaca tacactatca ttctaaattt ggtttgaaga aa
#cgtgtttg  42840
tagatattta ttcagtatat aatatgtgga taaaaaaggg actggaagaa ag
#cccactaa  42900
gtgtcaacag taacttcacc aggtgatggg aatttgagaa acttttttgc tt
#acacattt  42960
ttctgtattc ctatattttt catctagatt gtgcactact gttatcagaa tt
#ttttttaa  43020
atactatttt ttttttaaag taaagcataa taccaggtgt ggcaactcat gc
#ctggtaat  43080
cccagctact gggaggctga ggtgggagga ttgcttgagc ccaggaggtt ca
#gcctgggc  43140
aacataagca agactccatc tcaattaaaa aaaaaagaaa agaggtaaga ca
#tgtgcttg  43200
tattattata tcttataatg atatcttttt ttttgttttt tgagacaggg tc
#tcactctg  43260
tccccctggc tggagtgtag tggtgtgatc ttggctcact gcaacctccg cc
#tcccgggc  43320
tcaagtgatt cttccacctc agcctcctga gtagctggga atacgggcat gt
#gccaccac  43380
gcccggctga tttttgtatt tttagtagag acggggttgc ccaggctagt ct
#tgaactcc  43440
tgagctcagg tgatctgccc gcctcaacct cctgaagtgc gggggttaca gg
#catgagcc  43500
accacgcctg gcctataatg atatcttaaa agattgcttt cttttttttt tt
#tttttttt  43560
ttttttagac ggagtctcac tctcacccag gctggagtgc aatggcatgg tc
#ttggctca  43620
ctgcaacctc cgcctcccgg gttcaaacaa ttctccaacc tcagcctccc aa
#gtagctgg  43680
gactacaggc gcgtgccacc acacccagct aatttttata tttttagtag ag
#acggggtt  43740
ttgctatgtt ggccaggctg gtctcgatct cctgaccttg tgatccaccc gc
#ctcagcct  43800
cccaaagtgc tgggattaca ggcatgaacc accgtgcccg gccaattgca tt
#ttttaaaa  43860
agactggaag attgctagga gtattagtgg ttttcccatg ccccttctct gt
#tttccaaa  43920
ttgcttgtat tgtggctgca gtccttttat aatatgaaac aggtaaataa ca
#acttatgt  43980
tgtggctgca tcaaaggggt gagaaacgaa aaggagagga caaagcaaga tg
#tgcagagt  44040
tcgacctttc caggctctct caaagtcaag gttttgatca atgttatgag gg
#aggcctgt  44100
gaagtagctc agatggtctt gagctttcag catcatggat tcttctttta ga
#tcccatct  44160
tcccttccca actccccctt cctcaattcc tactgcttaa gtgtccatag gg
#cgatttct  44220
ttttcactgt tcagaagctt tctgcaagat gttcaaaata ctagcattgg tt
#tgagcagc  44280
tagtctgtct tgtgttcttg atttggggga cttagcttct atttagattt ct
#ttgaagct  44340
ggatgccagt gacccagggt ctatggaaga gtaagagcca cttgtgagga tg
#actgaaga  44400
ggccacaaac tctcagatcc tgagagtgta ggacaacttg tgccttctgc ta
#gtcccagg  44460
ccagaatggc catcctatct ttaaaaaaga aagcaagcaa gaaaaacgaa ag
#gttatagt  44520
tatttcccta agtactattt gaattatttt gttaaattaa gtatgagaaa ga
#ggtttgaa  44580
cgcttttcca gcttaaaatt taaaataaat atacagtttt taagtaaaag tg
#agatatga  44640
ttctttagaa atcatctggc atttagccag gcatggtggt gtgcacctgt ag
#tcctagct  44700
actcaggtgg ctgaggcagg aagatccctt gagcccagga ggttgaggct gc
#agtgagcc  44760
atgatcatgc cagtacttca gcccgggcaa tagagcaaga ccttatctct aa
#aaaaataa  44820
taaaaagacc tcacatttag acaatgtggt agtgtgctgg ttcagaagga gc
#ccagctat  44880
gcatggctaa gggcaaatcc ctgaatggag aaggaaattg aaaaatgttg ac
#taacctga  44940
gaaacagtct ttggaaaagg gtgatctcag gttctcatgc aggacaattt ag
#gaaaaaga  45000
gagcaagcca ggagaaggct gagaacttat tccccattag tcaaaaatct gc
#tttaagtc  45060
aagatcctgc aatggccttt cacaacaagc ccctgaaaat cagcagaaca aa
#gactgggc  45120
ctggtgagtg agtgcctacg cagagttctt gctgccgtga ttcagtgcaa gt
#tagaaacc  45180
tgtgctcttc tttagcctgg ggaaaaacca aagtcagcaa acccagctca ac
#tcagcaaa  45240
ctttcgtcgc ctgtatgcta actataaggc atgttgctag gtactgtgga aa
#ttgtaaag  45300
acacataaga taggaacctt cctgaaagca gtaacacttt agttgggtaa ag
#ggataagg  45360
agatatacac acacacacac acacacacac acacacacac cccactactt at
#atatatga  45420
atataaggga actccttctt tttgagggat gattttcgaa gtaaaatatc at
#atttgagc  45480
atatttaaaa ggccactgta aggctgtgtg cggtggctca cgcttgtaat cc
#cagcactt  45540
tgggaggccg aggtaggtgg atcacctgag gtcaggaatt cgagaccagc ct
#ggccaaca  45600
tggcgaaacc agtctctcta ctaaaaatac aaaaaaaaat cagtggggcg tg
#gtggcggg  45660
cgcctgtaat cccagccact caggaggcta aggcaggaga attgcttgaa cc
#agggaggc  45720
ggaggttgca gtgagccgag atggtgccac tgcactccag cctgggcaac ag
#agtgagac  45780
tccctaaaaa taaataaata aataaataaa taaataaata aataaataaa ta
#aaaggcca  45840
atgtaaaaga ggcctaacta tatttaggtt tttcttttcc tttaaatcta at
#tctaaatt  45900
atggaccatt gtcaatattt gtagcctctt tcgttgatta taataataat cc
#ctgaaaat  45960
gccttctaaa gaatgctggc cgcttgaggg caggagcagt ttatcagctg tg
#tttacctg  46020
aaacagccct cagtgtttgc tgggcattgt taaatgaatg tgcaaaagtt ga
#acgacaga  46080
cggacatatt acagggggac cttaccccca gtgagctaat gatgacattg at
#aattaccc  46140
ttcatttttt agacacagtc ttctgggata tattttcagt gttccacgtg gt
#cttcatct  46200
tgatgcgtct gtttcacatg tgaacgtaaa gttcgtgagc atctagttga gg
#ctgaggaa  46260
tcactgcttt caacattccc tgtggcttac atccctgcat ttttatgatc ac
#tgtagttt  46320
taatcactgg cactcctgtg tttctatttt ccacgaattg caaaatgcaa ta
#aaaaattc  46380
aaatattgta aacaagcatg gctatactga caaaggaagg ccaacattta ac
#tgctaggt  46440
gattttcaaa agctcagcat ctttatgtaa aaagcatagt agggatgcag cg
#aagtcaga  46500
agtcaaattt tattagagct gaggagagcc tgtagtagct tttgcttttt cc
#ctggtggc  46560
tgctcacttg aatttcagac agttctagta atgagagaaa ataaataaca tt
#acagggtg  46620
agctaaccct atgaacccag acctgtaaat ttgtagcaaa atgatactta ac
#ctcacaga  46680
cttgtgtctt aatctcctta agaggctttt tttgagcaag gctgagacat ct
#cagaagat  46740
actaaatctg tgtctatgaa cctgaccaca aaagagttct tccctcccag gg
#tctggagg  46800
gtgtgagtgc ctgtcggtcc gtgtgctgtt taaccctctg gtgctggact cc
#gggtctcc  46860
ctccgctctt ttctccctga tgcagagccc acactggtgc gctaacctgc ag
#cgtctctg  46920
tgcttctctt cttacctcct ctttcccctt ctctttccct cttgctgtgg tg
#tgtccaga  46980
aaaggaagtc gagttccagc gtgcacctaa tggtgagcct tgcctgccca cc
#catcgccc  47040
actccatgct gcctgtgccc gcctgccagc cacgcaaacc tgttctgcca cg
#tgcgtgtg  47100
cctcactcat cctcactgca tgtctgtgct gtgtgggcag gtgtggcctg tc
#ctgccagg  47160
cgggggccat tgcccaaggt cacccagtag cctaaaaagt ggacattgga ag
#gggtggta  47220
cggcaccccc tgctgtggag cttggacaga ccccagcgac ccagggtagg at
#gtgaagct  47280
ggtagggact tggggcaagc aagggagaga ccctcactct cttgtcaccc ag
#aaggagag  47340
gccctgcttc ccaggcatga ggagctgctt cctacagact ggcagctgga gg
#gcaactgt  47400
gtggtgggca gaggagctgg ttgcaggctc ccacttgtga gtctcgctct cc
#tggctctg  47460
cccccgtgca aatcccattc tctctagctg tgcccagtgg tttattctgc cc
#acccagcc  47520
ctcgggggac agctaactca tctttctcac gggacactgg gcaccaaggg ca
#acacagca  47580
gcctgagtca ttatgaaacc atccattaaa accagaggtg ggggccgggc gc
#gatggctc  47640
acgcctgtaa tcctagcact ttgggaggcc gaggcgggtg gatcacaagg tc
#aggagatc  47700
aagaccataa cacggtgaaa ccctgtctct actaaaaatg caaaaaatta gc
#caggtgtg  47760
gtggtgggcg cctgtagtcc cagctactca ggaggctgag gcaggagaat gg
#cgtgaacc  47820
caggaggcgg agcttgcagt gagccgagat cgcgccactg cgctccagcc tg
#ggcgacag  47880
agctagactc cgtctcaaaa aataaataaa ccagaggtgg ggccacttgg gt
#gacatccc  47940
agccctctgc aggttttgtg ggcaccctgg agtccttgcc ccctgtgagg gt
#cttggcct  48000
cagctgggat ttacaggtag ggcagccctc tctaaccaac cccgaacagg tc
#agcatcat  48060
tcactgagct aggtgggctt tgcttcttgg tgggaatgag agacagcaga gc
#tcccgtga  48120
gtttagaccc accgtctcac tactcctggg ccccctcttc tctagcctgt cg
#cagtctgt  48180
ggagtcttgt tcagtggagt cacttggtgc ctggcttgag gttccatgcc ta
#gccctggg  48240
tttggggatg tctgagccat tgacagcaag ctggcggtgg acggcttcag gt
#ctggtcca  48300
agaggcctcc aggcaagaag taggacagtc aggatgcttt ctgtgtatgt cc
#taggagag  48360
aagacacaca ttctagctgt cgatgtatca tctgtgccct gtgcagggat gg
#tagccaca  48420
catttgtctc actgcctatt gaagaacttg caggcatcag gctgctcctc ag
#tggccccc  48480
aaccccactg gaactcagtg agatggagta cgctggttag ggaactatca ga
#ggcaaaga  48540
acatcacatg gatatggctc cctgccctgg agatcagcct tcttcctttc tt
#ccatcttc  48600
cccttgcccc tcccttgctg tgcccctccg tgtaatgttt ttgtttgttc gt
#ttgctttt  48660
ggttttttga gatggagtct tgctctgttg cccaggctgg agtgcagtgg tg
#caatcttg  48720
gctcactgca atctctgcct cccaggttca agcaattctc ttgtctcagc ct
#cccgagta  48780
gctgggatta caggcatgtg ccaccatgcc cggctaattt ttgtattttt ag
#tagagacg  48840
gggtttcacc atgttggcca ggctggtctt gaactcctga cctcaggtga tc
#cacccgcc  48900
ttggcctccc aaagtgctga gattacaggt gtgagccacc gtgcccaccc ac
#ccaccatg  48960
tagttttgaa aggcaaggag atatccctgg tggtcatggt gctgttggga at
#gttggcct  49020
gtgtgtggcc tactctgtcc tgggggctgg attctgggac tacagctaca gc
#cccgctgg  49080
gtttcacctg cccctccccg gaacactgcc cttctagctg atcaggccta ag
#atttgtca  49140
gacaaaaagg tgaacagcac agtcctgact ctgctccctg aggtcagtga at
#gcattttg  49200
tgtctgaaag ggacttccac ccccatcctc tggacaccat ctcttaggcc ag
#gcatactt  49260
ttcttttctc cttcctcttt gtttcaggct tcgagctggt gttgtaagaa gg
#aaatacag  49320
gtgctgggtt gaaagtgcag caggagactg cccacagata ggggaccaga gt
#ttctgaat  49380
tttgttctgc tttcttataa actacccccc tttttcctgt acagtgggaa ga
#agatcttg  49440
aacttctttg ggtcaggtgt ggattttgca atgacctggc acctggcata ag
#cagagatt  49500
tctggaggga tgctttaaaa caaggctttg ggctggtccc accttgaggg tg
#cccccaga  49560
gctaggtctc tgggccccac aaatacttcc tctgatcatc tctctagcca tc
#gctcccat  49620
ctacacagcg ttatggaggc cacctcaggc ctacctcctc caggccagac ca
#gggggcaa  49680
gggaggtctg ggagttgaac ctgagtggcc ttggggactc tggaggaact aa
#accatctg  49740
ttttcttgtc tcagccacag agcaacaaca aaaacagtct cgtaagccca gc
#ccaagagc  49800
ccgcgccctt gcagacggcc atggtacctc ctgactacag cttctccgcc tc
#tgaccctg  49860
gctgcctcct gccccttccc tcttcctcct cttgtgcccc ctccctggcc tc
#ctggcctg  49920
ttcctttctt ggtccccata gaactgactg ctttgtgtgc cgccctgtat gc
#cccttccc  49980
cttcattgtc ccgcctggcc gcgctccatc ccgcatggca gaagtgctgc tc
#ctgctcct  50040
gctcctttcg ctggtggggg gaagagtgat cagggctctc agctgaacct cc
#caggccca  50100
gcccaggacc cctagtgggt ctgctgtggg ggctgggaag gtgagttgct ta
#ggaaagga  50160
gagggtagga gctttcttgg gacctgaaca tcagttcttg gaggccccct tg
#taaaacct  50220
gcctcagcct ctcctttgca aagccagaaa caggaaagag ggctggggtc cc
#cacctctg  50280
gatggtgctg aggtctccag gctcctggag tgcctcatgc tggctaagtt ct
#ctctgggc  50340
tcctccaggg gttctgtgtg ctcttggagg tccctctgct agtggtggct aa
#ctagagag  50400
tcagcagggg ggtgactggg aaagagggag aggtgatgtt gcctgctact cc
#cctccttg  50460
cggaccctca taccacgtga cgtggcggcg tggggccagg aactagggaa gg
#cagaaggc  50520
gggcgcagtg ggcagctctc tgggctcagc ttgctgaggg ggcctcctgt cc
#tggctctt  50580
tctgggagac ctcattcttc tgcccatgtt cctgcctcac acattccccg tg
#atgaacgc  50640
tgtgggcggg gcccggcctg tgccctcagt cccacagctc ctctagtgta cc
#tgccccgt  50700
gggaacccca tgtggaaaga gccctcagaa ctgacaggaa tcagggacag ag
#gcccttgc  50760
tgtcagcctc ctgggcacct gcacctgcca ggcctctctt tcttaccagc cc
#agtgctgc  50820
tgccaaaatc cagggctatc ccagctgccc gggaccccag ttgagccggg at
#attttgtc  50880
ttctggagat ggctggtggg caggcctcag tggtcatcat agggtctgcg gg
#ggtcctgg  50940
ggtgcaggtg gggctcctca gggaagagcc atagtctgtc cccaagtcgg aa
#gggtaatc  51000
ttcatcttct ctcacaggag ccacaaacca ctgtggtaca caacgctaca ga
#tgggatca  51060
aggtgagtgg ctcctgagcc tgcctcctgc tttccaggtc agcaggagac ag
#gtgggctg  51120
ggtcccaggg gtctacaggc tgcaccctga ggccaaggtg tttgcagagg ct
#cagctgaa  51180
ggtagcctgt gcccacagtt gctccatgct gaggaagggc attatacctt ac
#agagctca  51240
ggctttgcag tcagacagac ctggtctgaa tcctggccct gcaccttagt at
#cctttatc  51300
tgcaaattgg ggatgataat aatagaatct tcctccatat gtcggaagtt ta
#aatgagag  51360
taaacgttca ctgaaaaaat aggcaagagt atctccagac cctggagcgt tc
#tccatggc  51420
ctgacccctt tgtgcccttg atgttttcac cagcattcct gaacatctgt ta
#agcccaga  51480
taccatccat ggctctggct tacagaggtg acaagacaaa ttatctgttc aa
#acggtggg  51540
tgggatggga ggcagataaa aaaccaataa gcaaacagat aagataagct gg
#gcaccgtg  51600
gctcacacct gtaatcctca cactttggga ggccaaggtg cgcagatcgc ct
#gagctcag  51660
gagttagaga ccaccttggg caacatggtg aaaccctgtc tctactaaaa ta
#caaaaaag  51720
taggcaggtg tggtggcgcg tgcctgtagt cccagctact tgggaggctg ag
#gcacgata  51780
attgcttgag cctgggaggt ggaggttgca gtgagctgag atcacgccac tg
#cactccag  51840
cttgggctac gcagtgagac ttaatctctc aaaaaaaata aataagataa aa
#tctaatgt  51900
caataggtaa tctgaagaaa atggcagaaa gtagagagag ggccaggtgc gg
#tggctcat  51960
gcctgtaatc ctagcacttt gggaggccaa ggcgggcgga tcacttgagg tc
#aggagttc  52020
aaaaccagcc tggccaacat ggcaaaaccc catctctact aaagatacag aa
#attacctg  52080
gggatggtgg cacatgcctg taatcccagc tacctgggag gctgaggcag ga
#gaatcgct  52140
tgaacctggg aggcggaggt tgcagtgagc tgaaatcgtg ccactgcact tc
#agcctggg  52200
cgacagagca agactccatc taaaaaatga aaaacagaaa aacctcacca aa
#ctagacag  52260
agagaacagg gccttgaatt aagtagtcag gagagggctt ctttcaggag gt
#gatatctg  52320
agctagaaac tgaatggtgg gtgggaagga ggcagccagg ccagctctga gg
#ctgagtgc  52380
cctaagcaga aggaactgaa gctcagatgt ggcctttgta atcaagcaga gg
#gaagagca  52440
aagtgagacg gggagaacca taggagagtg atgaggttgg agaagcagca gg
#gcctgcta  52500
cagaggccct tgtaggagtt tgcattttct tccagcagca aggagaagct at
#tgggagtt  52560
cttagcagga gtaacagaat ctagttgaca ctttaaaaca ccactctggc ct
#catgatca  52620
agaactctag ggaggcccgg gcgtggtggc tcacgcccgt aatccctgca ct
#ttggaagg  52680
ccgaggcgag tggatcagca aaggtcagga gctcgagacc agcctggcca ac
#atgatgaa  52740
accccatctc taataaaaat acaaaaatta gccaggcatg gtggcaggca cc
#tgtaatcc  52800
cagctactca ggaggctgag acaggagaat cacttgaacc cgggaggcag ag
#gttgcagt  52860
gagccgagat catgccattg cactccagcc tgtgcaacaa gagcaaaact ct
#gtttcaaa  52920
aaagaaaaac tctagggagg aggtaagtgt ggaagttagg gagaccatga ag
#ctgttatc  52980
atggttcagg tgtgagatgc tggtggcctg gagtcaggtt gtagctgtgc at
#tggaagtg  53040
aagaggtaag acatggggtt tactttggag gcagaaccag aagattttat tt
#tagattgg  53100
gcgatctgaa tataagggaa aaagagaaag agaaggattg aggatgactc ca
#ggttttag  53160
cctgagtaac tgggtagatg gtggcattta ccaactgggg gaagactagg ga
#ggggattt  53220
gggaagagtc agacagccag ggtggaagca gaaccttcca caattcctcc tt
#gcacctct  53280
tgtaggagca gaaactctgc ttttgttctg ctttgctcct ctggcttcca ag
#ggatggag  53340
catatagaaa catgttcttt ttggcctaca gggctccaca gagagctgca ac
#accaccac  53400
agaagatgag gacctcaaag gtaggtgctg gcccttggag ggggaaggac tc
#cagcagtg  53460
acccaggtac ctgggctcca atggggcacc tgccttttct gtccccagaa ct
#gggaatgc  53520
tggctcctat gcccctagga gagggcttgg tataaaagct actttccacg ag
#ccaagata  53580
tgaggcccct gtctggtgtt gctgagttgg gcaagaggct tctcttcttt ga
#ccccaagt  53640
ctaaaatagc taagctagag attctccagg ggccagggct cagagaactg tt
#cctgttgc  53700
tgataatgat gtgccatcca agaacagggg taccccaagt ccctgccgaa gt
#agcctgta  53760
agtgctatga gtcataaata gagtgaccaa tcactcctgg ttttcctcgg ac
#acagaact  53820
tttggtttta agactgtgat gggccaggag tgctggctca cacctgtaat ac
#ccagaact  53880
ttgggagggc cagggcagaa ggattgcttg agaccaggag tttgagacaa gc
#ttgggcaa  53940
catagcaaga ccttgtctct attaaaaaaa aaaaattagg aacaaataaa ta
#ggccaggt  54000
gcggtgactc acacctgtaa tccccacact ttgggaggcc gaggcaagtg ga
#tcacttga  54060
ggtcaggagt tcaaaaccag cctggccaac atgatgaaac cccgtctcta ct
#aaaaatac  54120
aaaaaaaggc cgggcgtagt ggctcacgcc tgtaatccca acactttggg ag
#gccaaggt  54180
gggtggatca cctgaaggtc agaagttcaa gaccagcctg gccaacatgg tg
#aaactcca  54240
tctctactaa aaatataaaa aattagccag gtgtggggca ggtgcctgta at
#cgtagcta  54300
ctcgggaggc ggaggtggga gaatcgcttg aacctgggag gtggaggttg ca
#gtgagccg  54360
agatcacccc attgcactcc agcctgggca acaagagcga aacttcttct ca
#aaaaaaaa  54420
aaaaaaaaaa aaaaaattag ccgggtgtgg tggcggggtc ctgtaatccc ag
#ctactcgg  54480
gagactgagg catgaaaatg gcttgaaccc gggaggtgga ggttgcagtg ag
#ctgagatt  54540
gcaccactgc actccagcct gggtgacaga gcgagactct gtctcaagaa aa
#aaaaaaaa  54600
aaaaatatat atatatatat atatatatat atatatataa atataaaacc ca
#gatagtcc  54660
tgggaacact gggatgagtt ggtcactcta gtcttaagat tttggcctga at
#gatggagt  54720
tggaactaat ctgacaaccg tgaggccaca tttggtcatg tcctggtggg cc
#cgtaagga  54780
ccactagcct aagcttgggc ctggctagag tgccagggcg gtgggagggc at
#ggcaggct  54840
ggacccccgg gaatctctgt cctgctcttt gattgggcct cctggaattg ct
#ccctttgc  54900
ctgaattcag taagtgacct tgggccagga catcagaaaa gacagaggaa ca
#ctctagga  54960
cagagctggg agagcatgcc ctgggtggca agggggcacc aaaccttttg ga
#accaaaaa  55020
aaatagcaga aagctgcgag gaagtgaatc atagtagctc caggcccctg tg
#agtgaggt  55080
cagatcagtt ttgattccgg cactgctggc aacataggag gcgctgtcac tg
#ctgggctc  55140
tggaccctgt ggcctggccc cctggaacat cttccccggg atcaggggtc ct
#tggacagg  55200
ctgttgtaag gctcgtctgg aagccacagc ccaggtctgg gcacctgcct gg
#tgccctca  55260
gctgggaggc ctctctggca gaggcggcgg cgtgggatgt cgtccagtgt cc
#acagcagc  55320
ctgaggcgag gcgtcccctt gccccggctc tacagcgcca tgggctcggg gc
#ctgtctgg  55380
cttgctcgct cacctgcctt gttctgtttg ttttggctgc tctgccttgc cc
#tgccctgc  55440
cctgccctgg ctggctagct gccccgctcc gcactgggaa tggcagctcg gt
#gcctgaag  55500
gacggagctc ccgggacaga acagccccct ctgcaggcat gcagccccag cc
#ttctctct  55560
gctcctcagc cagtaagtgt gagggaggca cattctggct tccgtctccc tg
#gctcgtcc  55620
tgaagcccct cagggacccc caccacagct gtcagtccca cccacctgcc cg
#tggtagta  55680
agctctggga gcatggcctc tgctgggggt ggggggtaga ctggaggtgc tg
#ttgagacc  55740
aggcaggggc ccctgagtct ggggcccaaa gaaatatgag aagtgtgggt gg
#aaaaacat  55800
ggcctgggat gaggggagta gaaagccccc aggatgtgca gtgggccttg cc
#tcagcgct  55860
gagccaggaa gaagggcaga gtcggaagtc aggtctgtgg gggtgggagt gg
#gatgatgg  55920
ggaaatcgtg acagcgagga actgtgttgg ggatgtagtg cttcctgagt ct
#cagcataa  55980
cagtattaag agcatggggt cagaggcaag atagatctga gtttaaatcc ca
#gctacact  56040
gccttcaaga gtgtgaagtt taacctccca gagctgcagg ttccttatct gt
#aatgtgga  56100
aataaaatgg cacgcacctc agagccttgt tagataaaag acaaggcagt ag
#gaagtctt  56160
gatacggtgc ctcgatgggt tatcagtagc tcatcctcat atttctagtt ac
#gtctgtgc  56220
tggaggatgc ctttgtctgc tgcttttcct cccaccatct atccttgcag ag
#tttctaag  56280
cacaaccctc ttcgcccgtg gggccccagt caggtcatcc agatgggtct gg
#tggggttg  56340
gagagggtgt gtgtgttgtg ggtgcacacc tgcctgctgc ttttggaagc cg
#atcgaact  56400
ccttgcttcc cttaacctgc tgcttgctca cctggagctg tggcctagcg gg
#gctgacgg  56460
ctgtggggcc ccctcctgga tgtgcctttg gctgcgctgc cctgtcccaa ct
#gtgctgct  56520
tggctgtgct ggcccggctg ggccgtggtg gtgctgttct aacgcttgca gt
#tgtcttgc  56580
agccttttgc tcctgtgagg aaagggttgt ggcctggccc cgcccagggc tc
#gggttagg  56640
atgagcccaa gctcaaccca agctctccct taccctggtg gcagcccctg ct
#ggtagtgg  56700
cattccctat aagagaagcc catgccggca ggacatcacc agctgtccct tg
#gctttgga  56760
tgggttgggg aggaggcctc tggagggcac cacctctgcc tgcctgtcag tc
#tgagccct  56820
gtctggtttt cctgaggaac acgtcctggc aatgagagct ggtgtgaaat gt
#gcagcttt  56880
cccaagcctc gagaggtaaa tggagcagcc tctctggtac aggctgtccc aa
#gtttttac  56940
agttctggga tcatttctcc cagaaaagcc ctgtggagtt gagcagtggg aa
#gcatccat  57000
cctagggttc tgatggtctt ttggcacccc agccctagct ggattctgct gt
#caggctac  57060
ctgtcaccca gggctgggtc ctggccactg aatgagggct acgagtgggg gt
#ggtgattg  57120
agacctgact gagccccttc aggtgagaga agtaaattgg gggtggaagc gg
#ccttattg  57180
ggagatgctt gtgagagagg ctgctcatac aggggagggg ctcacagcat tc
#acgatgta  57240
ccaggctcct cacctgttaa aggcaagcgt gttttctgca acctggttgt tg
#atggaaag  57300
ggaggcaaag gccaaagaac cataactaat ggctgggctt caggagaaag tg
#gtcattgt  57360
ctctgcagac tgcagagagg gagacgggag ggaaggtgtg ttcgctcttc ct
#gccaaggg  57420
ccctagagac agagaagagg gatgtctttg tcataagcga tcacagggga ct
#cctgagga  57480
ctggggaggg ctctctgtaa cttgggaggt tccccagtag gtaaattgat gg
#atttttct  57540
cccccacagt gcgaaaacag gagatcatta agattacaga acagctgatt ga
#agccatca  57600
acaatgggga ctttgaggcc tacacgtaag tagagaccca tttttttttg tg
#acctaagt  57660
catctcccaa ggccttccct gcttccagac aacaattagg accctgggga aa
#gggaggtt  57720
ggaccttggg caaagtatct gagttaagcc ctctcctaaa ctgggagccc tt
#ccaggtag  57780
attccctgag ctcacccatg gtatcctggc agtgggccga aagcacaggg ct
#gagtggct  57840
cagcaggcag gcctggaaga tctttgctgt cttgtctggc atggccacag gt
#agcctgct  57900
gctactggat agacaccgct gataaggaag gaagacaagt cactccatag aa
#gcctgata  57960
ggctgctttt ttttttctcc ctgtaggaag atttgtgatc caggcctcac tt
#cctttgag  58020
cctgaggccc ttggtaacct cgtggagggg atggatttcc ataagtttta ct
#ttgagaat  58080
cgtgagtggg ttcgtgctgc tgatatactc ctgcctgccc ctttacccct tt
#gtctctgt  58140
ctcctgctca ccttctcatc ccagttgccc acttttccct tatttgacct tc
#gtgctgca  58200
ctcctactct gtatgcttgt ccccttgtgc cccgatggtt gtagacaggc ac
#ctttgaag  58260
gccctgctcc tgagctccaa gtgccattca ttctgcagct gctttgtggc ag
#tgccagtc  58320
accacaatca agctcactta tttcttgccg ggcgcggtgg cttacgcctg ta
#atcccaac  58380
actttgggag gctgaggctg gcggatcacg aggtcaggag atcgaggcca tc
#ctggctaa  58440
cacggtgaaa ccccatctct actaaaaata caaaaaatta gccgggcttg gt
#ggcagtgc  58500
ctgtagtccc agctactcgg gtggctgagg caggagaatg atgtgaacct gg
#gaggcaga  58560
gcttgcagtg agccaagatc aggccactgc actccagcct gggcaacaga gc
#aagactcc  58620
atctcaaaaa aaaagaaaaa attatttaag cctcacctct ttccaagacg ga
#ttggaagg  58680
aaaccctttg agattaggtt gagatgatct cagcacataa gaactaagct ct
#gtgtctgc  58740
aggtttcaca atagaggaaa ttaaaaccag gataagaatg tgcaaaccag gg
#cactgttg  58800
gtgatttgcg agatcggaag ttgtggctag aatcttcctg actatggagg aa
#ggcagacg  58860
tcttgtatag ggggtggggt gtacattctg gacagttcgt ggaaaataag gg
#gataagaa  58920
gctgaatcat caccccctcc catctttctc tctgctctat gagaccctcc cc
#ttccttat  58980
ttttatctct tcccacttta tgctgggcct tccctatcct gccctgagtt at
#agttagtc  59040
actaacttct ccgctggctc ccacccttat cacatctcag ctacatatat aa
#actctctg  59100
ttatctaagt aattctatta gccagaagca attccagagt ttatattagt ac
#taggaagg  59160
tgtcatgtag cccctgtcta acatttgaat tgaactaaaa tgtgaatctc aa
#taaaagca  59220
acacagtttt cacagcatat gctgataatg gcaatccaac ttcttttgcc tt
#ttccccag  59280
agaatcctgg gaatatcctg agcttggtgc tttgatgatt ctatttcagc tt
#tggtgcct  59340
taaaaaaaat tacaaatcaa ttttgaatgg tttaagttca tgattttgtt ct
#gcagccct  59400
agctaggggt gagccaagcc ttatgaaatc taaactcagc ctaacagaat ag
#aaaatcta  59460
taggctttag ttaagagtca catggtcctg agttcaggtg tgtgatttga gc
#aaattatt  59520
ccttgagcct atttcctcat cttataatga agaaaatatt atccaccaag aa
#atacagct  59580
cgggcatgta aaaccccagc acaatgcctg attaaaagcg cagcaggtac tg
#tcactgtt  59640
acccatcttt ctgttccttt tggataaagg agactaatgt aatgtggcat cc
#tggcctct  59700
ggagggcgtt caggggttcg ggggtggggg ggggcggtac ttggagattc tg
#ggagtggt  59760
tgcttgggag atggtaagac ttggaagtgc aggctgggag gaaaatgcag gt
#gcccaggc  59820
ctgatgtcct cttacctacc ccaccctgcc ctgcagtcct gtccaagaac ag
#caagccta  59880
tccataccac catcctaaac ccacacgtcc acgtgattgg ggaggacgca gc
#gtgcatcg  59940
cctacatccg cctcacccag tacatcgacg ggcagggtcg gcctcgcacc ag
#ccagtcag  60000
aagagacccg ggtctggcac cgtcgggatg gcaagtggct caatgtccac ta
#tcactgct  60060
caggggcccc tgccgcaccg ctgcagtgag ctcagccaca ggtgcacctg gt
#tgacgggg  60120
gagaggggct ggaagggcct gggataggtg gggtcagagg aagaagagaa gg
#ctgggagg  60180
tggtcctggg agaggaggtg tgggccgtcc cagaggactg gcaaagcctg gc
#agaatggt  60240
tgcaataagt tatgcttgga aatcagacag actagggtct ggctccgtga ct
#ccaaattg  60300
gatgacctca gacaggttac ttcccctccc taaactgttt ccttagctgt ca
#aagaaagg  60360
cagagagtgg tgcctacctc atttaatcat tgtgaggatt aagtaagata ct
#ataagtaa  60420
agcacttagt tagtgcttag caaatgggag gcagttttgt atttaagcat ta
#gcttcacc  60480
cactttcccc accttctcag gccgacttgg ccatgtgttt agcgtgctaa ag
#tcgctgga  60540
actcatctgt gtgctcattg tcctctgttc tgttaccaca ttctgtcctg tt
#tgacaggg  60600
gctttaggag attccagccg gaggtccaac cttcgcagcc agtggctctg ga
#gggcctga  60660
gtgacagcgg cagtcctgtt tgtttgaggt ttaaaacaat tcaattacaa aa
#gcggcagc  60720
agccaatgca cgcccctgca tgcagccctc ccgcccgccc ttcgtgtctg tc
#tctgctgt  60780
accgaggtgt tttttacatt taagaaaaaa aaaaaagaaa aaaagattgt tt
#aaaaaaaa  60840
aaggaatcca taccatgatg cgttttaaaa ccaccgacag cccttgggtt gg
#caagaagg  60900
caggagtatg tatgaggtcc atcctggcat gagcagtggc tcacccaccg gc
#cttgaaga  60960
ggtgagcttg gcctctctgg tccccatgga cttaggggga ccaggcaaga ac
#tctgacag  61020
agctttgggg gccgtgatgt gattgcagct cctgaggtgg cctgcttacc cc
#aggtctag  61080
gaatgaactt ctttggaact tgcataggcg cctagaatgg ggctgatgag aa
#catcgtga  61140
ccatcagacc tacttgggag agaacgcaga gctcccagcc tgctgtggag gc
#agctgaga  61200
agtggtggcc tcaggactga gagcccggac gttgctgtac tgtcttgttt ag
#tgtagaag  61260
ggaagagaat tggtgctgca gaagtgtacc cgccatgaag ccgatgagaa ac
#ctcgtgtt  61320
agtctgacat gcactcactc atccatttct ataggatgca caatgcatgt gg
#gccctaat  61380
attgaggcct tatccctgca gctaggaggg ggaggggttg ttgctgcttt gc
#ttcgtgtt  61440
ttcttctaac ctggcaagga gagagccagg ccctggtcag ggctcccgtg cc
#gcctttgg  61500
cggttctgtt tctgtgctga tctggaccat ctttgtcttg ccttttcacg gt
#agtggtcc  61560
ccatgctgac cctcatctgg gcctgggccc tctgccaagt gcccctgtgg ga
#tgggagga  61620
gtgaggcagt gggagaagag gtggtggtcg tttctatgca ttcaggctgc ct
#ttggggct  61680
gcctcccttc ttattcttcc ttgctgcacg tccatctctt ttcctgtctt tg
#agattgac  61740
ctgactgctc tggcaagaag aagaggtgtc cttacagagg cctctttact ga
#ccaactga  61800
agtatagact tactgctgga caatctgcat gggcatcacc cctccccgca tg
#taacccaa  61860
aagaggtgtc cagagccaag gcttctacct tcattgtccc tctctgtgct ca
#aggagttc  61920
cattccagga ggaagagatc tataccctaa gcagatagca aagaagataa tg
#gaggagca  61980
attggtcatg gccttggttt ccctcaaaac aacgctgcag atttatctgc ac
#aaacatct  62040
ccacttttgg gggaaaggtg ggtagattcc agttccctgg actaccttca gg
#aggcacga  62100
gagctgggag aagaggcaaa gctacaggtt tacttgggag ccagctgaga ag
#agagcaga  62160
ctcacaggtg ctggtgcttg gatttagcca ggctcctccg agcacctcat gc
#atgtccca  62220
gcccctgggc cctagccctt tcctgccctg cagtctgcag tgccagcacg ca
#aatccctt  62280
caccacaggg tttcgttttg ctggcttgaa gacaaatggt cttagaattc at
#tgagaccc  62340
atagcttcat atggctgctc cagccccact tcttagcatt cttactcctc tt
#ctggggct  62400
aatgtcagca tctatagaca atagactatt aaaaaatcac cttttaaaca ag
#aaacggaa  62460
ggcatttgat gcagaatttt tgcatgacaa catagaaata atttaaaaat ag
#tgtttgtt  62520
ctgaatgttg gtagaccctt catagctttg ttacaatgaa accttgaact ga
#aaatattt  62580
aataaaataa cctttaaaca gtccattgtg ttactgctgt tggaggttta cg
#gccagagg  62640
cgtagatttt agcagcctgg gttaccaggt tggagagagt acctcctcct ac
#tccctttg  62700
ggtacttttg agaataaaac ttcctcatgc ctgtaatccc agtactttgg ga
#ggccgagg  62760
cgggcgaatc acgaggtcag gagttcgaga ccagcctggc taat
#                62804
<210> SEQ ID NO 4
<211> LENGTH: 556
<212> TYPE: PRT
<213> ORGANISM: Homo sapien
<400> SEQUENCE: 4
Met Ala Thr Thr Ala Thr Cys Thr Arg Phe Th
#r Asp Asp Tyr Gln Leu
1               5
#                10
#                15
Phe Glu Glu Leu Gly Lys Gly Ala Phe Ser Va
#l Val Arg Arg Cys Val
20
#            25
#            30
Lys Lys Thr Ser Thr Gln Glu Tyr Ala Ala Ly
#s Ile Ile Asn Thr Lys
35
#        40
#        45
Lys Leu Ser Ala Arg Asp His Gln Lys Leu Gl
#u Arg Glu Ala Arg Ile
50
#    55
#    60
Cys Arg Leu Leu Lys His Pro Asn Ile Val Ar
#g Leu His Asp Ser Ile
65
#70
#75
#80
Ser Glu Glu Gly Phe His Tyr Leu Val Phe As
#p Leu Val Thr Gly Gly
85
#                90
#                95
Glu Leu Phe Glu Asp Ile Val Ala Arg Glu Ty
#r Tyr Ser Glu Ala Asp
100
#           105
#           110
Ala Ser His Cys Ile His Gln Ile Leu Glu Se
#r Val Asn His Ile His
115
#       120
#       125
Gln His Asp Ile Val His Arg Asp Leu Lys Pr
#o Glu Asn Leu Leu Leu
130
#   135
#   140
Ala Ser Lys Cys Lys Gly Ala Ala Val Lys Le
#u Ala Asp Phe Gly Leu
145                 1
#50                 1
#55                 1
#60
Ala Ile Glu Val Gln Gly Glu Gln Gln Ala Tr
#p Phe Gly Phe Ala Gly
165
#               170
#               175
Thr Pro Gly Tyr Leu Ser Pro Glu Val Leu Ar
#g Lys Asp Pro Tyr Gly
180
#           185
#           190
Lys Pro Val Asp Ile Trp Ala Cys Gly Val Il
#e Leu Tyr Ile Leu Leu
195
#       200
#       205
Val Gly Tyr Pro Pro Phe Trp Asp Glu Asp Gl
#n His Lys Leu Tyr Gln
210
#   215
#   220
Gln Ile Lys Ala Gly Ala Tyr Asp Phe Pro Se
#r Pro Glu Trp Asp Thr
225                 2
#30                 2
#35                 2
#40
Val Thr Pro Glu Ala Lys Asn Leu Ile Asn Gl
#n Met Leu Thr Ile Asn
245
#               250
#               255
Pro Ala Lys Arg Ile Thr Ala Asp Gln Ala Le
#u Lys His Pro Trp Val
260
#           265
#           270
Cys Gln Arg Ser Thr Val Ala Ser Met Met Hi
#s Arg Gln Glu Thr Val
275
#       280
#       285
Glu Cys Leu Arg Lys Phe Asn Ala Arg Arg Ly
#s Leu Lys Gly Ala Ile
290
#   295
#   300
Leu Thr Thr Met Leu Val Ser Arg Asn Phe Se
#r Ala Ala Lys Ser Leu
305                 3
#10                 3
#15                 3
#20
Leu Asn Lys Lys Ser Asp Gly Gly Val Lys Pr
#o Gln Ser Asn Asn Lys
325
#               330
#               335
Asn Ser Leu Val Ser Pro Ala Gln Glu Pro Al
#a Pro Leu Gln Thr Ala
340
#           345
#           350
Met Glu Pro Gln Thr Thr Val Val His Asn Al
#a Thr Asp Gly Ile Lys
355
#       360
#       365
Gly Ser Thr Glu Ser Cys Asn Thr Thr Thr Gl
#u Asp Glu Asp Leu Lys
370
#   375
#   380
Ala Ala Pro Leu Arg Thr Gly Asn Gly Ser Se
#r Val Pro Glu Gly Arg
385                 3
#90                 3
#95                 4
#00
Ser Ser Arg Asp Arg Thr Ala Pro Ser Ala Gl
#y Met Gln Pro Gln Pro
405
#               410
#               415
Ser Leu Cys Ser Ser Ala Met Arg Lys Gln Gl
#u Ile Ile Lys Ile Thr
420
#           425
#           430
Glu Gln Leu Ile Glu Ala Ile Asn Asn Gly As
#p Phe Glu Ala Tyr Thr
435
#       440
#       445
Lys Ile Cys Asp Pro Gly Leu Thr Ser Phe Gl
#u Pro Glu Ala Leu Gly
450
#   455
#   460
Asn Leu Val Glu Gly Met Asp Phe His Lys Ph
#e Tyr Phe Glu Asn Leu
465                 4
#70                 4
#75                 4
#80
Leu Ser Lys Asn Ser Lys Pro Ile His Thr Th
#r Ile Leu Asn Pro His
485
#               490
#               495
Val His Val Ile Gly Glu Asp Ala Ala Cys Il
#e Ala Tyr Ile Arg Leu
500
#           505
#           510
Thr Gln Tyr Ile Asp Gly Gln Gly Arg Pro Ar
#g Thr Ser Gln Ser Glu
515
#       520
#       525
Glu Thr Arg Val Trp His Arg Arg Asp Gly Ly
#s Trp Leu Asn Val His
530
#   535
#   540
Tyr His Cys Ser Gly Ala Pro Ala Ala Pro Le
#u Gln
545                 5
#50                 5
#55

Claims

1. An isolated polypeptide having an amino acid sequence consisting of SEQ ID NO:2.

2. An isolated calcium/calmodulin-dependent protein kinase having an amino acid sequence comprising SEQ ID NO:2.

3. A composition comprising the polypeptide of claim 1 and a carrier.

4. A composition comprising the calcium/calmodulin-dependent protein kinase of claim 2 and a carrier.