The present disclosure belongs to the field of pharmaceutical chemistry, and specifically, relates to a ligand, a method for preparing the same, and use thereof.
A ligand is a molecule or group that can bind to a target protein. A precisely designed ligand that can perfectly bind to a target protein is covalently linked to a certain functional molecule, which facilitates the delivery of such functional molecule to the target tissue and performance of its specific functions, and greatly reduces the toxic side effects caused by off-target. Nucleic acid drugs, as an emerging type of drugs in recent years, are of great significance for the treatment of major human diseases. However, nucleic acids per se are difficult to penetrate the cell membrane, and have non-targeting property and poor druggability, while ligand-linked nucleic acid drugs are endowed with tissue targeting specificity, and can enter cells smoothly through receptor-ligand mediated endocytosis, and play a role. Asialoglycoprotein receptor (ASGP-R), a transmembrane glycoprotein highly expressed on hepatocytes, can specifically recognize glycosyl residues such as galactose (Gal-) and N-acetylgalactosamine (GalNAc-) residues, and has a 50-fold higher affinity for GalNAc than for Gal. Therefore, a designed and constructed ligand with GalNAc glycosyl residues is very suitable for the liver-targeted delivery of functional molecules, especially nucleic acid drugs.
On this basis, the present disclosure is proposed.
Firstly, the present disclosure relates to a ligand having a structure of Formula I or Formula II:
Further, in the ligand,
and
Further, in the ligand having a structure of Formula I,
(m is an integer from 1 to 4);
More further, in the ligand having a structure of Formula I, Y has a structure of:
(m is an integer from 1 to 4);
More further, in the ligand having a structure of Formula I, where a1 and a2 are present, A is selected from:
and
Where a3 is present, B is selected from:
Further, in the ligand having a structure of Formula I, T1-T3 may be the same or different, and T1 to T3 are each independently selected from:
Further, in the ligand having a structure of Formula I,
Most preferably, the ligand having a structure of Formula I has the following structures:
In another aspect of the present disclosure, in the ligand having a structure of Formula II,
(m is an integer from 1 to 4);
Further, in the ligand having a structure of Formula II, Y has a structure of
More further, in the ligand having a structure of Formula II, where a1, a2, a3 and a4 are all present, A1 and A2 are each independently selected from:
More further, in the ligand having a structure of Formula II, B is selected from:
More further, in the ligand having a structure of Formula II, T1 to T4 may be the same or different, and T1 to T4 are each independently selected from:
More further, in the ligand having a structure of Formula II,
Most preferably, the ligand having a structure of Formula II has any one of the following structures:
The present disclosure further relates to an activated/modified ligand having an activation/modification group obtained by activating/modifying the ligand, wherein the activation/modification group includes but is not limited to:
The present disclosure further relates to use of the ligand and the activated/modified ligand in linking a functional compound; preferably, the functional compound is a drug; more preferably, the drug is a nucleic acid drug.
Further, the (activated/modified) ligand is used for in vivo delivery of the drug; preferably, the in vivo delivery is liver-targeted delivery.
The present disclosure further relates to a conjugate formed by coupling the ligand with a nucleic acid or a fluorescent compound, wherein,
The present disclosure further relates to a method for preparing the ligand of Formula V,
a glycoside comprising a chain of T1-T3 linked to position 1 of glycosyl and a protective group on saccharide hydroxyl is obtained by subjecting saccharide G1-G3 without a protective group to protection reaction (generally acetylation) to obtain a saccharide having a protective group on saccharide hydroxyl, which is then subjected to glycosylation reaction with a chain of T1-T3 having a terminal protective group at one end and a chemically reactive group at the other end, and further to deprotection reaction to remove the terminal protective group from T1-T3;
the saccharide chain comprising
is obtained by subjecting the saccharide chain comprising
to condensation or substitution reaction with a compound comprising T1′-T3′, which may be deprotected first and then reacted with T1-T3;
where a1-a3 are present, a X-comprising compound is firstly subjected to protection reaction to obtain a X-comprising compound in which a1-a3 have a protective group, which is then subjected to condensation or substitution reaction with a Y-comprising compound; a1-a3 may not be protected, and the X-comprising compound is directly linked to the Y-comprising compound by condensation or substitution reaction; if X and/or Y have a protective group at residue position 4, the linking reaction is conducted after the protective group is removed;
the compound comprising
is obtained by subjecting the compound comprising
to addition, condensation or substitution reaction with a chain or a precursor compound comprising T1′-T3′, or alternatively by subjecting a compound comprising
and a compound comprising
to addition, condensation or substitution reaction with the chain or the precursor compound comprising T1′-T3′ to obtain a compound comprising
and a compound comprising
respectively, which are then subjected to condensation or substitution reaction with each other at residue position 4;
the compound comprising
is obtained by subjecting the compound comprising
to deprotection reaction at T1′-T2′ terminus, and then to condensation or substitution reaction with the saccharide chain comprising
with protected glycosyl and unprotected T1-T2 terminus, or alternatively by subjecting a compound comprising
to condensation or substitution reaction with the saccharide chain comprising
with protected glycosyl and unprotected T1′-T2′ terminus;
the compound comprising
is obtained by subjecting the compound comprising
to deprotection reaction to remove the protective group at T3′ terminus and then to condensation or substitution reaction with the saccharide chain comprising
or alternatively by subjecting a compound comprising
to condensation or substitution reaction with the saccharide chain comprising
which are similar to the protocols in step (5);
the compound comprising
is obtained by subjecting the saccharide chain comprising
and the compound comprising
to deprotection reaction to remove their respective reactive groups, and then to condensation or substitution reaction with each other at residue positions 1-3, or alternatively by subjecting the saccharide chain comprising
to reaction with the compound comprising
or alternatively by subjecting the compound comprising
and the compound comprising
to deprotection reaction at residue position 4 and then to condensation or substitution reaction.
Further, the present disclosure relates to a method for further modifying the ligand of Formula III, comprising the steps of:
The present disclosure further relates to a method for preparing a ligand of Formula VI,
a glycoside comprising a chain of T1-T4 linked to position 1 of glycosyl and a protective group on saccharide hydroxyl is obtained by subjecting saccharide G1-G4 without a protective group to protection reaction (generally acetylation) to obtain a saccharide having a protective group on saccharide hydroxyl, which is then subjected to glycosylation reaction with a chain of T1-T4 having a protective group at one end and a chemically reactive group at the other end;
the saccharide chain comprising
is obtained by subjecting the saccharide chain comprising
to deprotection reaction at T1-T4 terminus and then to condensation or substitution reaction with a compound comprising T1′-T4′; the compound comprising T1′-T4′ may be deprotected first and then react with T1-T4;
where a1-a4 are present, a compound comprising
is firstly subjected to protection reaction to obtain a compound comprising
in which a1-a4 have a protective group, which is then subjected to condensation or substitution reaction with a compound comprising
a1-a4 may not be protected, and the compound comprising
is directly linked to the compound comprising
by condensation or substitution reaction; if
and/or
have a protective group at residue position 5/6, the linking reaction is conducted after the protective group is removed; where only a1 and a2 are absent, or where only a3 and a4 are absent, or where a1-a4 are all absent, the compound comprising
is synthesized by following the above-described method with a1-a4 protection/deprotection involved or not;
the compound comprising
is obtained by subjecting the compound comprising
to addition, condensation or substitution reaction with a chain or precursor compound comprising T1′-T4′, or alternatively by subjecting the compound comprising
to addition, condensation or substitution reaction with the chain or precursor compound comprising T1′-T4′ to obtain a compound comprising
which is then subjected to condensation or substitution reaction with a compound comprising
at residue position 5/6;
the compound comprising
is obtained by subjecting the compound comprising
to deprotection reaction at T1′-T2′ terminus, and then to condensation or substitution reaction with the saccharide chain comprising
with protected glycosyl and unprotected T1-T2 terminus, or alternatively by subjecting a compound comprising
to condensation or substitution reaction with the saccharide chain comprising
with protected glycosyl and unprotected T1′-T2′ terminus;
the compound comprising
is obtained by subjecting the saccharide chain comprising
and the compound comprising
to deprotection reaction to remove their respective reactive groups, and then to condensation or substitution reaction with each other at residue positions 1-4, or alternatively by subjecting the saccharide chain comprising
to reaction with the compound comprising
Chain structure refers to a chemical structure that morphologically extends in one dimension, formed by linking atom(s)/group(s) that can bond to each other in sequence, without strict limitation on the number of atom(s)/group(s). Backbone structure refers to a structure that serves as the starting point or core of a compound's structure, allows the molecule to extend outward by linking other chemical groups or structures, and plays a role similar to backbone. Triple-branched form refers to a branched structure which has three branches extending outward morphologically or a branched structure which can form a triple-branched compound by conveniently linking to other groups through three chemically modifiable sites. Chemically reactive group refers to a group that has sufficient chemical reactivity to carry out the desired chemical reaction under reaction conditions as described or relatively easy to achieve.
O-glucosidic, S-glucosidic and N-glucosidic bonds refer to oxygen-, sulfur- and nitrogen-glucosidic bonds, respectively, and O, S and N represent oxygen, sulfur and nitrogen atoms, respectively.
Receptor is a biological macromolecule that can bind to a substance such as a drug or a signaling molecule and cause changes in biological functions.
Ligand is a molecule that can specifically bind to a receptor.
In the present disclosure, the ligand is a chemical structure with a certain molecular backbone, and may comprise one or more chiral centers and thus may comprise optical enantiomers and diastereomers of the structure, since chiral change of other constituent moieties other than glycosyl in the structure generally does not affect the chemical construction mode, synthesis process and preparation method of the structure. There is a part
in the ligand structure, indicating that the group at that site is variable, can be a chemically acceptable group, and can be linked to or combined with other chemical groups, structures, supports, etc., in a covalent or non-covalent manner.
In the present disclosure, the synthesis of a certain compound or intermediate is described in a concise manner. Starting material refers to main raw material for synthesis of a compound or intermediate, and comprises the main structural moieties that constitute the compound or intermediate.
Substitution reaction refers to a reaction in which a compound having a leaving group such as halogen is subjected to substitution by a nucleophilic group such as an amino/amine, hydroxyl or sulfhydryl group under the action of alkali to liberate one molecule of hydrogen halide and generate a N—C, O—C or S—C bond.
Amidation condensation reaction or amidation reaction refers to a reaction in which a carboxyl group reacts with an amino/amine group in presence of a condensating agent to liberate one molecule of water and form an amide bond; it also comprises a reaction in which an amino/amine group reacts with acyl chloride, anhydride and active ester to form an amide bond.
Urea condensation reaction refers to a reaction in which two molecules of amino/amine groups react with one molecule of carbonyl donor reagent to form urea.
9-Fluorenylmethoxycarbonylation protection reaction refers to a reaction in which an acylation reagent such as 9-fluorenylmethoxycarbonyl chloride reacts with an amino/amine group to produce 9-fluorenylmethoxycarbonyl amino/substituted amino group.
Benzylation protection reaction refers to a reaction in which benzyl bromide or chloride reacts with a hydroxy, amino/amine or carbonyl group to produce benzyl ether of hydroxyl, benzylamine or benzyl carboxylate.
Benzyloxycarbonylation protection reaction refers to a reaction in which an acylation reagent such as benzyloxycarbonyl chloride with an amino/amine group to produce benzyloxycarbonyl amino/substituted amino group.
Debenzylation reaction refers to a reaction in which a hydroxyl, amino/amine or carboxyl group protected by a benzyl group is subjected to breakage and removal of the benzyl group to produce a naked hydroxyl, amino/amine or carboxyl group in the presence of Pd/C catalysts, and hydrogen or hydrogen donor reagents.
De-benzyloxycarbonylation reaction refers to a reaction in which an amino/amine group protected by a benzyloxycarbonyl group is subjected to breakage and removal of the benzyloxycarbonyl group to produce a naked amino/amine group under the action of Pd/C catalysts, and hydrogen or hydrogen donor reagents.
De-tert-butylation reaction refers to a reaction in which a carboxyl group protected by a tert-butyl group (tert-butyl ester) is subjected to removal of the tert-butyl group or decomposition/hydrolysis of the tert-butyl ester to produce a naked carboxyl group under acidic conditions.
De-tert-butoxycarbonylation reaction refers to a reaction in which an amino/amine group protected by a tert-butoxycarbonyl group is subjected to decomposition of the tert-butoxycarbonyl group to produce a naked amino/amine group (acid addition salts of ammonia/amine) under acidic conditions.
De-9-fluorenylmethoxycarbonylation reaction refers to a reaction in which an amino/amine group protected by a 9-fluorenylmethoxycarbonyl group is subjected to breakage and removal of the 9-fluorenylmethoxycarbonyl group to produce a naked amino/amine under the action of a base (generally a secondary amine or tertiary amine) or fluorine ion.
Demethylation reaction refers to a reaction in which a carboxyl group protected by methyl ester is subjected to hydrolysis of methyl ester to produce a naked carboxyl group/carboxylate under alkaline conditions.
Addition reaction refers to the nucleophilic addition of a compound having a nucleophilic group such as hydroxyl, sulfhydryl, primary amino group or secondary amino group to β-carbon atom of an α,β-unsaturated carbonyl or cyano compound under base catalysis to produce a saturated carbonyl or cyano compound having a O—C bond (an ether), S—C bond (a thioether) or N—C bond at β-carbon atom. Preferably, the nucleophilic group is a hydroxyl group, and the corresponding compound is a primary alcohol, secondary alcohol or tertiary alcohol, preferably a primary alcohol or secondary alcohol. The base is generally an alkali metal hydroxide (sodium hydroxide, potassium hydroxide or lithium hydroxide), a hydride (sodium hydride, potassium hydride or lithium hydride) or an alkoxide (potassium/sodium alkoxide, generally methoxide, ethoxide or tert-butoxide), or an alkali metal carbonate (potassium carbonate, sodium carbonate, cesium carbonate, lithium carbonate, etc.), or a basic amine (triethylamine, diisopropylethylamine, etc.), or an alkali amide (e.g., sodium amide, lithium diisopropylamide or potassium/sodium/lithium hexamethyldisilylamide). The α,β-unsaturated carbonyl compound is generally an acrylate (preferably tert-butyl acrylate, methyl acrylate, ethyl acrylate or benzyl acrylate), and the α,β-unsaturated cyano compound is generally acrylonitrile.
Unless otherwise specified, the raw materials, reagents and solvents used in the present disclosure for synthesis are analytically pure.
SM1 (13.4 g, 99.9 mmol) and sodium hydroxide (4 g, 100 mmol) were added to a flask containing N,N-dimethylformamide (74 mL), heated to 100° C. and stirred until the reaction mixture became clear. Next, with the temperature maintained 100° C. and under constant stirring, the reaction solution was dropwise added with benzyl bromide (20.5 g, 119.9 mmol) in 20 min, and then the reaction was carried out under stirring for 20 h when TLC showed that the conversion of the raw materials was complete (dichloromethane/methanol, 10/1, Rf of the product: 0.4). The reaction solution was slowly diluted with pure water (190 mL) and extracted with ethyl acetate (45 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (35 mL×2), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a colorless solid (a crude product). The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 4/1 to pure ethyl acetate) to obtain 9.9 g of a colorless transparent liquid with a yield of 44.2%.
MS (ESI): m/z [M+Na]+, theoretical 247.2, found 247.2.
Under N2 atmosphere and at room temperature, sodium hydride (60%, 19.2 g, 479.5 mmol) was slowly added to tert-butyl bromoacetate (109.1 g, 559.4 mmol) and tetrabutylammonium iodide (2.9 g, 8.0 mmol) in tetrahydrofuran (300 mL) in batches, and stirred at room temperature for 0.5 h. The reaction was then dropwise added with SM1-Z01 (17.9 g, 79.9 mmol) dissolved in tetrahydrofuran (60 mL) within 0.5 h and then carried out under stirring for 20 h when LCMS showed that the reaction was complete. The reaction solution was slowly added to 25% aqueous ammonium chloride solution (1000 mL) which was cooled in an ice bath of 0-5° C. and constantly stirred to quench the reaction, and concentrated under reduced pressure to remove about 300 mL of the solvent, and the residue was extracted with ethyl acetate (200 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (200 mL), dried over anhydrous sodium sulfate and concentrated to obtain a yellow liquid (a crude product). The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 9/1) to obtain 8.0 g of a colorless transparent liquid with a yield of 22.2%.
MS (ESI): m/z [M+Na]+, theoretical 475.2, found 475.2.
1H NMR (400 MHz, DMSO-d6) δ 7.39-7.28 (m, 5H), 5.12 (s, 2H), 3.96 (s, 4H), 3.59 (dd, J=13.1, 8.7 Hz, 4H), 1.41 (br s, 19H), 1.18 (s, 3H).
CC-1X (6 g, 13.3 mmol) and dichloromethane (30 mL) were successively added to a flask, and under constant stirring and at room temperature, trifluoroacetic acid (12.1 g, 106.2 mmol) was slowly added, and then the reaction was carried out for 16 h when LCMS showed the reaction was complete. The reaction solution was concentrated under reduced pressure to be oily, and dried under vacuum at 50° C. for 1 h to obtain 4.7 g of a yellow oily liquid product with a yield of 104% (the product contained some residual TFA and could be directly used in subsequent reaction without purification).
MS (ESI): m/z [M−H]−, theoretical 339.1, found 339.1.
CC-1X (1.0 g, 2.2 mmol) was dissolved in tetrahydrofuran (6 mL) and added with Pd/C (0.1 g, 10 wt %). The reaction system was replaced with hydrogen for three times and then the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h as LCMS showed that there was no residual raw material. The obtained reaction mixture was filtered to remove the insoluble solid, and the filtrate was concentrated and dried under vacuum to obtain 0.74 g of a white solid product with a yield of 93%.
MS (ESI): m/z [M+H]+, theoretical 363.2, found 363.3.
SM1-Z01 (4.0 g, 17.8 mmol) was added to a flask and dissolved with dichloromethane (40 mL), followed by successive addition of 37% aqueous sodium hydroxide solution (45 mL), tetrabutylammonium bromide (2.87 g, 8.9 mmol) and tert-butyl 3-bromopropionate (11.2 g, 53.4 mmol) under stirring at room temperature. The reaction was then carried out under stirring for 16 h when TLC showed the reaction was completed (petroleum ether/ethyl acetate, 4/1, Rf of the product: 0.3). The reaction solution was diluted with pure water (50 mL) and extracted with dichloromethane (30 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure, and the residue was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 10/1) to obtain 2.74 g of a colorless oily product with a yield of 32%.
MS (ESI): m/z [M+Na]+, theoretical 503.3, found 503.1.
1H NMR (400 MHz, DMSO-d6) δ 7.37-7.26 (m, 5H), 5.11 (s, 2H), 3.69-3.62 (m, 4H), 3.36 (dd, J=10.6, 7.2 Hz, 4H), 2.54 (t, J=5.4 Hz, 4H), 1.43 (br s, 19H), 1.16 (s, 3H).
CC-2X (6 g, 12.5 mmol) and dichloromethane (20 mL) was successively added to a flask, and under constant stirring and at room temperature, trifluoroacetic acid (9.1 g, 80.0 mmol) was slowly added, and then the reaction was carried out for 6 h when LCMS showed that the reaction was completed. The reaction solution was concentrated under reduced pressure to be oily, and dried under vacuum at 50° C. for 1 h to obtain 5.1 g of a yellow oily liquid product with a yield of 110% (the product contained some residual TFA and could be directly used in subsequent reaction without purification).
MS (ESI): m/z [M−H]−, theoretical 367.2, found 367.1.
CC-2X (0.8 g, 1.67 mmol) was dissolved in tetrahydrofuran (4 mL) and added with Pd/C (80 mg, 10 wt %). The reaction system was replaced with hydrogen for three times and then the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when LCMS showed that there was no residual raw material. The obtained mixture was filtered to remove the insoluble solid, and the filtrate was concentrated and dried under vacuum to obtain 0.65 g of a white solid product with a yield of 99%.
MS (ESI): m/z [M+H]+, theoretical 391.2, found 391.0.
SM2 (20 g, 219.8 mmoL) and tert-butyl acrylate (61.9 g, 483.6 mmoL) were successively added to a flask containing DMSO (60 mL) at room temperature and stirred until the reaction mixture became clear. The reaction was then added with sodium hydroxide (0.9 g, 22.5 mmoL) dissolved in pure water (4 mL) and carried out under stirring at room temperature for 20 h when LCMS showed that the reaction was substantially complete. The reaction solution was diluted with pure water (100 mL) and extracted with ethyl acetate (60 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (50 mL×3), dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure to obtain a yellow liquid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 10/1) to obtain 38 g of a yellow oily liquid product with a yield of 50%.
MS (ESI): m/z [M+Na]+, theoretical 370.2, found 370.1.
At room temperature, CN-1A (2.5 g, 7.2 mmol) was added to a flask containing dichloromethane (22 mL), and added with sodium bicarbonate (0.73 g, 8.7 mmol) dissolved in pure water (8 mL), and under constant stirring, benzyl chloroformate (1.23 g, 7.2 mmol) was dropwise added, and then the reaction was carried out for 24 h when LCMC showed that the reaction was completed.
The reaction solution was concentrated under reduced pressure to obtain a light green solid-liquid mixture, which was added with pure water (25 mL), mixed well and extracted with dichloromethane (20 mL×3). The organic phases were combined, washed with 26% aqueous sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, filtered, concentrated and purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 10/1 to 7/2) to obtain 2.7 g of a light yellow oily product with a yield of 79%.
MS (ESI): m/z [M+Na]+, theoretical 504.3, found 504.5.
CN-1X (1.05 g, 2.18 mmol) was dissolved in dichloromethane (4 mL), and added with trifluoroacetic acid (4 mL) under constant stirring. The reaction was then carried out under stirring at 35° C. for 6 h when LCMS showed that the reaction was completed. The reaction mixture was subjected to distillation under reduced pressure to remove the solvent, and the obtained oily crude product was purified by silica gel column chromatography (100-200 meshes, dichloromethane/methanol, 10/1) to obtain 0.68 g of a yellow oily liquid product with a yield of 84%.
MS (ESI): m/z [M−H]−, theoretical 368.1, found 368.2.
1H NMR (400 MHz, DMSO-d6) δ 12.21 (br s, 2H), 7.40-7.28 (m, 5H), 7.18 (d, J=8.3 Hz, 1H), 5.01 (s, 2H), 3.77-3.66 (m, 1H), 3.57 (t, J=6.3 Hz, 4H), 3.34 (d, J=6.0 Hz, 4H), 2.43 (t, J=6.3 Hz, 4H).
At room temperature, SM2-2 (10.5 g, 100 mmol) and tert-butyl acrylate (33.3 g, 260 mmol) were successively added to a flask containing DMSO (140 mL) and stirred until the reaction mixture became clear. The reaction was then added with sodium hydroxide (0.8 g, 20 mmoL) dissolved in pure water (4 mL) and then carried out under stirring at room temperature for 48 h when LCMS showed that the reaction was complete. The reaction solution was diluted with pure water (200 mL) and extracted with ethyl acetate (150 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (100 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a yellow liquid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 9/1) to obtain 15.4 g of a yellow oily liquid product with a yield of 42.7%.
MS (ESI): m/z [M+H]+, theoretical 362.3, found 362.1.
At room temperature, CN-2A (5.1 g, 14.1 mmol) was added to a flask containing dichloromethane (30 mL), and then added with sodium bicarbonate (1.43 g, 17.0 mmol) dissolved in pure water (15 mL), and under constant stirring, benzyl chloroformate (2.4 g, 14.1 mmol) was slowly dropwise added, and then the reaction was carried out for 16 h when LCMS showed the reaction was completed. The reaction solution was concentrated under reduced pressure, mixed with pure water (30 mL) and extracted with dichloromethane (25 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, filtered, and concentrated, and the crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 10/1 to 7/2) to obtain 6.36 g of a light yellow oily product with a yield of 91%.
MS (ESI): m/z [M+H]+, theoretical 496.3, found 496.2.
1H NMR (400 MHz, DMSO-d6) δ 7.38-7.25 (m, 5H), 7.14 (s, 1H), 4.98 (s, 2H), 3.73-3.60 (m, 8H), 2.52 (t, J=6.4 Hz, 4H), 1.40 (br s, 18H), 1.25 (s, 3H).
CN-2X (3.3 g, 6.66 mmol) was dissolved in dichloromethane (10 mL) and added with trifluoroacetic acid (6 mL) under constant stirring. The reaction was then carried out under stirring at 35° C. for 6 h when LCMS showed that the reaction was completed. The reaction mixture is subjected to distillation under reduced pressure to remove the solvent, and the obtained crude product was purified by silica gel column chromatography (100-200 meshes, dichloromethane/methanol, 10/1) to obtain 1.97 g of a colorless oily liquid product with a yield of 77%.
MS (ESI): m/z [M−H]−, theoretical 382.2, found 382.3.
SM3 (2.1 g, 20 mmol) was added to a flask and dissolved with 60 mL of tetrahydrofuran, and under stirring, the reaction was successively added with pure water (20 mL) and sodium bicarbonate (2.0 g, 23.8 mmol), and slowly dropwise added with benzyl chloroformate (3.4 g, 20 mmol) dissolved in tetrahydrofuran (10 mL) within 0.5 h, and the reaction was then carried out for 2 h when TLC showed that the raw materials were completely converted (dichloromethane/methanol, 10/1, Rf of the product: 0.5). The reaction solution was diluted with pure water (50 mL) and extracted with dichloromethane (50 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate and filtered. The filtrate was subjected to distillation under reduced pressure to remove the solvent, and the residue was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 9/1) to obtain 3.92 g of a yellow oily product with a yield of 82%.
MS (ESI): m/z [M+Na]+, theoretical 262.1, found 262.1.
SM3-Z01 (2.39 g, 9.99 mmol) was added to a flask and dissolved with dichloromethane (40 mL), followed by successive addition of 37% aqueous sodium hydroxide solution (40 mL), tetrabutylammonium bromide (3.54 g, 8.4 mmol) and tert-butyl bromoacetate (15.6 g, 80.0 mmol) under stirring at room temperature. Then the reaction was carried out under stirring for 20 h when TLC showed that the reaction was completed (petroleum ether/ethyl acetate, 4/1, Rf of the product: 0.3). The reaction solution was diluted with pure water (50 mL) and extracted with dichloromethane (30 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure, and the residue was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 4/1) to obtain 1.82 g of a colorless oily product with a yield of 39%.
MS (ESI): m/z [M+Na]+, theoretical 490.3, found 490.2.
1H NMR (400 MHz, CDCl3) δ 7.35-7.25 (m, 5H), 5.05 (s, 2H), 3.95 (s, 4H), 3.69 (t, J=5.8 Hz, 4H), 3.32 (t, J=5.9 Hz, 4H), 1.38 (s, 18H).
CN-3X (1.2 g, 2.57 mmol) was dissolved in methanol (25 mL) and added with Pd/C (0.12 g, 10 wt %). The reaction system was replaced with hydrogen for three times and then the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when LCMS showed that the reaction was complete. The obtained mixture was filtered to remove the solid, and the filtrate was concentrated under reduced pressure to obtain 0.8 g of a colorless oily liquid with a yield of 93%.
MS (ESI): m/z [M+H]+, theoretical 334.2, found 334.2.
CN-3X (233 mg, 0.5 mmol) and dichloromethane (2 mL) were successively added to a flask, and under constant stirring at room temperature, trifluoroacetic acid (1.54 g, 13.5 mmol) was slowly added, and the reaction was then carried out for 4 h when LCMS showed that the reaction was completed. The reaction solution was concentrated under reduced pressure to be oily, and dried under vacuum at 50° C. for 1 h to obtain 204 mg of a light yellow oily product with a yield of 115% (the product contained some residual TFA and could be directly used in subsequent reaction without purification).
MS (ESI): m/z [M−H]−, theoretical 354.1, found 354.2.
SM3-Z01 (1.3 g, 5.4 mmol) was added to a flask and dissolved with dichloromethane (20 mL), followed by successive addition of 37% aqueous sodium hydroxide solution (22 mL), tetrabutylammonium bromide (1.46 g, 4.54 mmol) and tert-butyl 3-bromopropionate (4.5 g, 21.6 mmol) under stirring at room temperature. The reaction was then carried out under stirring for 20 h when TLC showed that the reaction was completed (petroleum ether/ethyl acetate, 4/1, Rf of the product: 0.4). The reaction solution was diluted with pure water (30 mL) and extracted with dichloromethane (20 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure, and the residue was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 4/1) to obtain 0.78 g of a colorless oily product with a yield of 29%.
MS (ESI): m/z [M+Na]+, theoretical 518.3, found 518.4.
CN-4X (0.52 g, 1.05 mmol) was dissolved in methanol (6 mL) and added with Pd/C (50 mg, 10 wt %). The reaction system was replaced with hydrogen for three times, and the reaction was then carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the insoluble solid, and the filtrate was concentrated under reduced pressure to obtain 0.37 g of a colorless oily liquid with a yield of 97%.
MS (ESI): m/z [M+H]+, theoretical 362.3, found 362.5.
CN-4X (0.2 g, 0.404 mmol) and dichloromethane (2 mL) were successively added to a flask, and under constant stirring at room temperature, trifluoroacetic acid (1 mL) was slowly added, and the reaction was then carried out for 4 h when LCMS showed that the reaction was completed. The reaction solution was concentrated under reduced pressure to be oily, and the residue was dried under vacuum at 50° C. for 1 h to obtain 0.167 g of a light yellow oily product with a yield of 108% (the product contained some residual TFA and could be directly used in subsequent reaction without purification).
MS (ESI): m/z [M−H]−, theoretical 382.2, found 382.2.
SM4 monohydrate (10 g, 44.8 mmol), 150 mL of tetrahydrofuran and 20 g of anhydrous sodium sulfate were added to a flask and allowed to reaction under stirring at room temperature for 0.5 h, followed by suction filtration. The filtrate was added to a flask and added with sodium hydride (60%, 5.9 g, 147.5 mmol) in batches in an ice bath. The reaction was then increased to room temperature, carried out under stirring for 0.5 h, then added with tert-butyl bromoacetate (14.4 g, 73.8 mmol) dissolved in 20 mL of tetrahydrofuran and carried out under stirring at room temperature for 20 h when TLC showed that the conversion of raw materials was completed (dichloromethane/methanol, 10/1, Rf of the product: 0.4). The reaction was quenched with 100 mL of water, adjusted to about pH7 with 0.5 N hydrochloric acid, subjected to distillation under reduced pressure to remove most of tetrahydrofuran and extracted with dichloromethane (100 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure, and the crude product was purified by silica gel column chromatography to obtain 3.96 g of a yellow oily product with a yield of 27.7%.
MS (ESI): m/z [M+H]+, theoretical 320.2, found 320.3.
SM4-Z01 (2.65 g, 8.3 mmol) and potassium carbonate (1.26 g, 9.1 mmol) were added to a flask containing N,N-dimethylformamide (15 mL), and under stirring and at room temperature, benzyl bromide (1.56 g, 9.1 mmol) was dropwise added within 20 min, and then the reaction was carried out for 16 h when TLC showed disappearance of raw material points and appearance of a new product point (petroleum ether/ethyl acetate, 1/1, Rf of the product: 0.6). The reaction solution was added with pure water (30 mL) and extracted with ethyl acetate (15 mL×3). The obtained organic phases were combined, washed with 26% saturated saline solution (20 mL), dried over anhydrous sodium sulfate, filtered and concentrated to obtain a colorless liquid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 10/1 to 2/1) to obtain 2.86 g of a colorless oily liquid product with a yield of 84%.
MS (ESI): m/z [M+Na]+, theoretical 432.2, found 432.1.
SM4-Z02 (2.5 g, 6.1 mmol) was added to a flask containing 1,4-dioxane (5 mL), followed by 4 M HCl/1,4-dioxane solution (5 mL), and the reaction was then carried out under stirring for 1 h when TLC showed disappearance of raw material points and appearance of a new product point (adjusted to about pH7, petroleum ether/ethyl acetate, 1/1, Rf of the product: 0.6). The reaction solution was concentrated under reduced pressure, and the crude product was dissolved in ethyl acetate (30 mL), washed with 8% aqueous sodium bicarbonate solution (10 mL×3), dried over anhydrous sodium sulfate, filtered, concentrated and dried under vacuum to obtain 1.8 g of a yellow oily product with a yield of 95%.
MS (ESI): m/z [M+H]+, theoretical 310.2, found 310.2.
Under N2 atmosphere, SM4-Z03 (1.5 g, 4.85 mmol) and triethylamine (0.5 g, 4.94 mmol) were added to a flask containing dichloromethane (18 mL), and under stirring, N,N′-carbonyldiimidazole (0.801 g, 4.94 mmol) was added slowly, and the reaction was then carried out for 1 h. The reaction was then added with CN-1A (1.72 g, 4.94 mmol) in batches and carried out under stirring at room temperature for 16 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (25 mL) and extracted with dichloromethane (15 mL×3). The obtained organic phases were combined, washed with 26% saturated saline solution (20 mL), dried over anhydrous sodium sulfate, filtered and concentrated. The obtained crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 2/1) to obtain 2.15 g of a white foamy solid product with a yield of 65%.
MS (ESI): m/z [M+H]+, theoretical 683.4, found 683.6.
1H NMR (400 MHz, DMSO-d6) δ 7.51 (d, J=7.3 Hz, 1H), 7.39-7.24 (m, 5H), 7.09 (d, J=6.8 Hz, 1H), 5.12 (s, 2H), 4.45-4.36 (m, 1H), 4.08 (dd, J=14.8, 4.3 Hz, 2H), 3.81-3.70 (m, 21), 3.73-3.63 (m, 5H), 3.55-3.48 (m, 4H), 2.65-2.55 (m, 4H), 1.41 (br s, 27H).
CC-3X (1.1 g, 1.61 mmol) was dissolved in tetrahydrofuran (8 mL) and added with Pd/C (0.1 g, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was then carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the insoluble solid, and the filtrate was concentrated under reduced pressure and dried under vacuum to obtain 0.89 g of a white foamy solid product with a yield of 93%.
MS (ESI): m/z [M+H]+, theoretical 593.3, found 593.4.
CC-3X (0.95 g, 1.39 mmol) and dichloromethane (6 mL) were successively added to a flask, and under constant stirring and at room temperature, trifluoroacetic acid (3 mL) was added, and the reaction was then carried out for 4 h when LCMS showed that the reaction was complete. The reaction solution was concentrated under reduced pressure to be oily and dried under vacuum at 50° C. for 1 h to obtain 0.75 g of a light yellow oily product with a yield of 105% (the product contained some residual TFA and could be directly used in subsequent reaction without purification).
MS (ESI): m/z [M−H]−, theoretical 513.2, found 513.1.
Under N2 atmosphere, SM4-2 (2.2 g, 11.3 mmol), SM1 (1.5 g, 11.3 mmol), EDCI (2.37 g, 12.4 mmol), HOBt (1.53 g, 11.3 mmol) and triethylamine (2.9 g, 22.6 mmol) were added to a flask containing N,N-dimethylformamide (30 mL). The reaction was carried out under stirring at room temperature for 6 h when LCMS showed that the reaction was complete. The reaction solution was concentrated under reduced pressure, and the crude product was purified directly by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 30/1) to obtain 1.72 g of a white solid product with a yield of 49%.
MS (ESI): m/z [M+H]+, theoretical 312.1, found 312.3.
Under N2 atmosphere, SM4-Z03 (1.0 g, 3.2 mmol), CC-1B (1.41 g, 3.9 mmol) and triethylamine (0.98 g, 9.7 mmol) were added to a flask containing dichloromethane (30 mL) and stirred until the reaction mixture became clear. The reaction was then added with PyBOP (2.19 g, 4.2 mmol) and carried out under stirring at room temperature for 12 h when TLC showed the disappearance of raw material points and the appearance of a new product point (petroleum ether/ethyl acetate, 3/2, Rf of the product: 0.6). The reaction solution was concentrated under reduced pressure. The obtained crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 2/1) to obtain 1.49 g of a colorless viscous oily product with a yield of 71%.
MS (ESI): m/z [M+H]+, theoretical 654.3, found 654.5.
CC-5X (0.58 g, 0.89 mmol) was dissolved in tetrahydrofuran (9 mL) and added with Pd/C (0.11 g, 10 wt %). The reaction system was replaced with hydrogen gas for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when LCMS showed no residual raw materials. The reaction mixture was filtered to remove the solid, and the filtrate was concentrated and purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 10/1) to obtain 0.44 g of a white solid product with a yield of 88%.
MS (ESI): m/z [M+H]+, theoretical 564.3, found 564.3.
1H NMR (400 MHz, DMSO-d6) δ 7.80 (d, J=7.3 Hz, 1H), 4.28 (dt, J=8.1, 4.5 Hz, 1H), 4.06-3.93 (m, 6H), 3.83 (dd, J=9.9, 5.1 Hz, 1H), 3.70 (dd, J=10.0, 3.9 Hz, 1H), 3.64-3.51 (m, 4H), 1.42 (s, 27H), 1.10 (s, 3H).
CC-5X (0.5 g, 0.76 mmol) was dissolved in trifluoroacetic acid (5 mL) and then the reaction was carried out under stirring at room temperature for 6 h when LCMS showed no residual raw materials. The reaction solution was subjected to distillation under reduced pressure to remove trifluoroacetic acid, and the crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 10/1) to obtain 0.27 g of a white solid product with a yield of 74%.
MS (ESI): m/z [M+H]+, theoretical 486.2, found 486.1.
1H NMR (400 MHz, DMSO-d6) δ 8.33 (d, J=7.1 Hz, 1H), 7.40-7.28 (m, 5H), 5.12 (dd, J=19.8, 12.7 Hz, 2H), 4.54-4.46 (m, 1H), 4.07-3.93 (m, 8H), 3.89 (dd, J=9.9, 5.3 Hz, 1H), 3.75 (dd, J=9.9, 4.4 Hz, 1H), 3.67-3.52 (m, 4H), 1.08 (s, 3H).
CC-6X was obtained by subjecting SM4-Z03 and CC-2B as starting materials to the same amidation condensation reaction steps for synthesis of CC-5X.
MS (ESI): m/z [M+H]+, theoretical 682.4, found 682.4.
1H NMR (400 MHz, DMSO-d6) δ 7.75 (d, J=7.8 Hz, 1H), 7.39-7.24 (m, 5H), 3.15 (s, 2H), 4.45-4.35 (m, 1H), 4.08 (dd, J=34.8, 3.9 Hz, 2H), 3.78 (d, J=5.0 Hz, 2H), 3.75-3.65 (m, 4H), 3.57 (s, 4H), 2.62 (t, J=5.4 Hz, 4H), 1.41 (br s, 27H), 1.15 (s, 3H).
CC-6A was obtained by subjecting CC-6X as a starting material to the same debenzylation reaction steps for synthesis of CC-5A.
MS (ESI): m/z [M+H]+, theoretical 592.3, found 592.4.
CC-6B was obtained by subjecting CC-6X as a starting material to the same de-tert-butylation reaction steps for synthesis of CC-5B.
MS (ESI): m/z [M−H]−, theoretical 512.2, found 512.1.
SM5-Z01 was obtained by subjecting SM5 as a starting material to the same substitution reaction steps for synthesis of SM4-Z01.
MS (ESI): m/z [M+H]+, theoretical 346.2, found 346.3.
SM5-Z02 was obtained by subjecting SM5-Z01 as a starting material to the same benzylation protection reaction steps for synthesis of SM4-Z02.
MS (ESI): m/z [M+H]+, theoretical 436.2, found 436.4.
SM5-Z03 was obtained by subjecting SM5-Z02 as a starting material to the same de-tert-butoxycarbonylation reaction steps for synthesis of SM4-Z03.
MS (ESI): m/z [M+H]+, theoretical 336.2, found 336.3.
CC-4X was obtained by subjecting SM5-Z03 and CN-1A as starting materials to the same urea condensation reaction steps of the synthesis of CC-3X.
MS (ESI): m/z [M+Na]+, theoretical 731.4, found 731.4.
1H NMR (400 MHz, DMSO-d6) δ 7.34-7.25 (m, 5H), 6.75 (d, J=7.5 Hz, 1H), 5.12 (s, 2H), 4.54-4.46 (m, 1H), 4.33-4.24 (m, 1H), 4.20 (dd, J=14.6, 9.2 Hz, 2H), 3.78-3.71 (m, 1H), 3.67 (L J=6.5 Hz, 4H), 3.57-3.40 (m, 6H), 2.60 (m, 4H), 2.38-2.29 (m, 1H), 2.28-2.18 (m, 1H), 1.41 (br s, 27H).
CC-4A was obtained by subjecting CC-4X as a starting material to the same debenzylation reaction steps for synthesis of CC-3A.
MS (ESI): m/z [M+H]+, theoretical 619.3, found 619.5.
CC-4B was obtained by subjecting CC-4X as a starting material to the same de-tert-butylation reaction steps for synthesis of CC-3B.
MS (ESI): m/z [M−H]−, theoretical 539.2, found 539.3.
SM5-2 (2.8 g, 12.7 mmol) and SM1 (1.7 g, 12.7 mmol) were successively added to a flask containing methanol (40 mL), followed by addition of DMT-MM monohydrate (5.6 g, 19.1 mmol) in batches under stirring. The reaction was then carried out under stirring at room temperature for 16 h when LCMS showed that the reaction was complete. The reaction solution was concentrated under reduced pressure, and the obtained crude product was purified directly by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 30/1) to obtain 2.96 g of a white solid product with a yield of 69%.
MS (ESI): m/z [M+H]+, theoretical 338.2, found 338.3.
CC-7X was obtained by subjecting SM5-Z03 and CC-1B as starting materials to the same amidation condensation reaction steps for synthesis of CC-5X.
MS (ESI): m/z [M+H]+, theoretical 680.4, found 680.3.
CC-7A was obtained by subjecting CC-7X as a starting material to the same debenzylation reaction steps for synthesis of CC-5A.
MS (ESI): m/z [M+H]+, theoretical 590.3, found 590.3.
CC-7B was obtained by subjecting CC-7X as a starting material to the same de-tert-butylation reaction steps for synthesis of CC-5B.
MS (ESI): m/z [M−H]−, theoretical 510.2, found 510.4.
CC-8X was obtained by subjecting SM5-Z03 and CC-2B as starting materials to the same amidation condensation reaction steps for synthesis of CC-6X.
MS (ESI): m/z [M+Na]+, theoretical 730.4, found 730.3.
CC-8A was obtained by subjecting CC-8X as a starting material to the same debenzylation reaction steps for synthesis of CC-6A.
MS (ESI): m/z [M+H]+, theoretical 618.3, found 618.3.
CC-8B was obtained by subjecting CC-8X as a starting material to the same de-tert-butylation reaction steps for synthesis of CC-6B.
MS (ESI): m/z [M+H]+, theoretical 540.2, found 540.2.
CC-13X was obtained by subjecting CC-7X-Z01 as a starting material to the same addition reaction steps for synthesis of CN-1A.
MS (ESI): m/z [M+H]+, theoretical 722.4, found 722.6.
CC-13A was obtained by subjecting CC-13X as a starting material to the same debenzylation reaction steps for synthesis of CC-7A.
MS (ESI): m/z [M+H]+, theoretical 632.4, found 632.4.
CC-13B was obtained by subjecting CC-13X as a starting material to the same de-tert-butylation reaction steps for synthesis of CC-7B.
MS (ESI): m/z [M−H]−, theoretical 552.2, found 552.0.
Under N2 atmosphere, CC-1B (1.4 g, 3.86 mmol) and N-methylmorpholine (0.78 g, 7.73 mmol) were successively added to a flask containing dichloromethane (12 mL), cooled to 0-5° C. in an ice bath, and then slowly dropwise added with isobutyl chloroformate (0.54 g, 3.94 mmol). The reaction was maintained at the temperature and carried out under stirring for 1 h. The reaction was added with SM7 (0.8 g, 3.94 mmol) and then carried out under stirring at room temperature for 2 h when LCMS showed that the reaction was complete. The reaction solution was diluted with water (20 mL), adjusted to about pH4 with 0.5 N hydrochloric acid, and extracted with dichloromethane (10 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The crude product was crystallized with methyl tert-butyl ether to obtain 1.9 g of a light yellow solid product with a yield of 90%.
MS (ESI): m/z [M+H]+, theoretical 548.3, found 548.2.
CC-10 was obtained by subjecting SM7 and CN-1A as starting materials to the same urea condensation reaction steps for synthesis of CC-3X.
MS (ESI): m/z [M+H]+, theoretical 577.3, found 577.5.
CC-11 was obtained by subjecting SM7 and CN-3A as starting materials to the same urea condensation reaction steps for synthesis of CC-10.
MS (ESI): m/z [M+H]+, theoretical 563.3, found 563.4.
CC-12 was obtained by subjecting SM7 and CN-4A as starting materials to the same urea condensation reaction steps for synthesis of CC-10.
MS (ESI): m/z [M+H]+, theoretical 577.3, found 577.5.
CC-14 was obtained by subjecting SM7 and CN-2B as starting materials to the same amidation condensation reaction steps for synthesis of CC-9.
MS (ESI): m/z [M+H]+, theoretical 591.3, found 591.4.
SM4-Z01 (3.96 g, 12.4 mmol) and 150 mL of dichloromethane were added to a flask, followed by successive addition of CN-1A (4.31 g, 12.4 mmol), EDCI (3.58 g, 18.6 mmol), triethylamine (3.76 g, 37.2 mmol) and DMAP (0.3 g, 2.4 mmol) under stirring at room temperature. The reaction was then carried out under stirring for 12 h when TLC showed that the conversion of the raw materials was complete (petroleum ether/ethyl acetate, 1/1, Rf of the product: 0.5). The reaction solution was washed with 100 mL of water, extracted with 150 mL of dichloromethane and washed with 26% aqueous sodium chloride solution. The obtained organic phases were combined, dried over anhydrous sodium sulfate and subjected to distillation under reduced pressure to remove solvents. The residue was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 2/1) to obtain 3.77 g of a light yellow oily product with a yield of 46%.
MS (ESI): m/z [M+H]+, theoretical 649.4, found 649.4.
CN-5X (4.16 g, 6.4 mmol) was added to a flask and dissolved with 10 mL of dichloromethane, and under stirring and at room temperature, 2 mL of trifluoroacetic acid was slowly added, and the reaction was then carried out for 20 min when TLC showed that the conversion of the raw materials was complete (adjusted to about pH7, dichloromethane/methanol, 10/1, Rf of the product: 0.3). The reaction solution was subjected to distillation under reduced pressure at room temperature to remove the solvent and most trifluoroacetic acid, added with 8% aqueous sodium bicarbonate solution (50 mL), stirred well, and extracted with dichloromethane (35 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate and subjected to distillation under reduced pressure to remove the solvent. The residue was purified by silica gel column chromatography to obtain 1.02 g of a light yellow oily product with a yield of 29%.
MS (ESI): m/z [M+H]+, theoretical 549.3, found 549.3.
CC-5B was obtained by subjecting CN-5A as a starting material to the same de-tert-butylation reaction steps for synthesis of CC-5B.
MS (ESI): m/z [M−H]−, theoretical 513.2, found 513.3.
CC-7X was obtained by subjecting SM5-Z01 and CN-1A as starting materials to the same amidation condensation reaction steps for synthesis of CC-5X.
MS (ESI): m/z [M+H]+, theoretical 675.4, found 675.6.
CN-7A was obtained by subjecting CN-7X as a starting material to the same de-tert-butoxycarbonylation reaction steps for synthesis of CN-5A.
MS (ESI): m/z [M+H]+, theoretical 575.4, found 575.5.
SM5-3-Z01 was obtained by subjecting SM5-3 as a starting material to the same substitution reaction steps for synthesis of SM5-Z01.
MS (ESI): m/z [M+H]+, theoretical 380.2, found 380.3.
CN-7X-2 was obtained by subjecting SM5-3-Z01 and CN-1A as starting materials to the same amidation condensation reaction steps for synthesis of CN-7X.
MS (ESI): m/z [M+H]+, theoretical 709.4, found 709.3.
CN-7B was obtained by subjecting CN-7X-2 as a starting material to the same de-tert-butylation reaction steps for synthesis of CN-5B.
MS (ESI): m/z [M−H]−, theoretical 539.2, found 539.4.
SM4 monohydrate (7.2 g, 32.3 mmol), tetrahydrofuran (120 mL) and 20 g of anhydrous sodium sulfate were added to a flask, stirred at room temperature for 0.5 h and then filtered. The filtrate was added to a flask, cooled in an ice bath of 0-5° C., and added with sodium hydride (60%, 3.88 g, 97.0 mmol) in batches. The reaction was maintained at the temperature and carried out under stirring for 0.5 h. The reaction was then dropwise added with tert-butyl 3-bromopropionate (10.8 g, 51.7 mmol) in tetrahydrofuran (20 mL), was allowed to naturally increase to room temperature and then carried out for 16 h when TLC showed that the raw materials were completely converted (dichloromethane/methanol, 10/1, Rf of the product: 0.4). The reaction was quenched with 25% aqueous ammonium chloride solution (80 mL), adjusted to about pH7 with 0.5 N hydrochloric acid, and subjected to distillation under reduced pressure to remove most of tetrahydrofuran, and the residue was extracted with dichloromethane (80 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The residue was purified by silica gel column chromatography to obtain 1.94 g of a yellow oily product with a yield of 18%.
MS (ESI): m/z [M+H]+, theoretical 334.2, found 334.4.
Under N2 atmosphere, dichloromethane (40 mL), SM4 monohydrate (2.3 g, 25.2 mmol), SM2 (5.6 g, 25.2 mmol) and 5 g of anhydrous sodium sulfate were successively added into a flask and the reaction was carried out under stirring for 0.5 h. The reaction mixture was then successively added with EDCI (6.3 g, 32.8 mmol), HOBt (3.4 g, 25.2 mmol) and DIEA (6.5 g, 50.4 mmol) and then the reaction was carried out under stirring at room temperature for 6 h when TLC showed that the reaction was complete. The reaction solution was added with 30 mL of pure water and extracted with dichloromethane (20 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (40 mL), dried over anhydrous sodium sulfate, filtered and concentrated. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 30/1) to obtain 2.67 g of a white solid product with a yield of 38%.
MS (ESI): m/z [M+Na]+, theoretical 301.2, found 301.3.
Under N2 atmosphere and at room temperature, CN-1A (1.25 g, 3.6 mmol), SM4-Z04 (1.2 g, 3.6 mmol), EDCI (0.89 g, 4.68 mmol), HOBt (0.48 g, 3.6 mmol) and DIEA (0.93 g, 7.2 mmol) were successively added to a flask containing dichloromethane (12 mL) and then the reaction was carried out under stirring at room temperature for 4 h when LCMS showed that the reaction was complete. The reaction solution was added with 12 mL of pure water and extracted with dichloromethane (10 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (12 mL), dried over anhydrous sodium sulfate, filtered and concentrated. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 2/1) to obtain 1.98 g of a colorless oily liquid product with a yield of 83%.
MS (ESI): m/z [M+Na]+, theoretical 663.4, found 663.5.
CN-6X (1.9 g, 2.87 mmol) was added to a flask containing 1,4-dioxane (5 mL), followed by addition of 4 M HCl/1,4-dioxane solution (5 mL) under constant stirring. The reaction was then carried out under stirring for 1 h when LCMS showed that the reaction was completed. The reaction solution was concentrated under reduced pressure and dried under vacuum at 40° C. to obtain 1.79 g of a yellow oily product (a HCl salt) with a yield of 104%.
MS (ESI): m/z [M+H]+, theoretical 563.4, found 563.5.
CN-6A (a HCl salt, 857 mg, 1.43 mmol) was added to a flask and dissolved with tetrahydrofuran (10 mL), and successively added with pure water (5 mL) and sodium bicarbonate (144 mg, 1.72 mmol), and under stirring, the reaction was finally dropwise added with benzyl chloroformate (268 mg, 1.57 mmol), and then carried out for 1 h when LCMS showed that the reaction was completed. The residue obtained by concentration under reduced pressure was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 1/1) to obtain 903 mg of a colorless oily product, a benzyl carbamate intermediate. The obtained oily intermediate was dissolved in dichloromethane (8 mL), and under constant stirring and at room temperature, trifluoroacetic acid (6 mL) was slowly added, and the reaction was then carried out for 6 h when LCMS showed that the reaction was completed. The reaction solution was concentrated under reduced pressure to be oily. The residue was dried under vacuum at 50° C. for 1 h to obtain 702.9 mg of a white foamy product with a yield of 93% (the product contained some residual TFA and could be directly used in subsequent reaction without purification).
MS (ESI): m/z [M+H]+, theoretical 529.2, found 529.4.
SM5-Z04 was obtained by subjecting SM5 and tert-butyl 3-bromopropionate as starting materials to the same substitution reaction steps for synthesis of SM5-Z01.
MS (ESI): m/z [M+H]+, theoretical 360.2, found 360.2.
CN-8X was obtained by subjecting SM5-Z04 and CN-1A as starting materials to the same amidation condensation reaction steps for synthesis of CN-7X.
MS (ESI): m/z [M+H]+, theoretical 689.4, found 689.4.
CN-8A was obtained by subjecting CN-8X as a starting material to the same de-tert-butoxycarbonylation reaction steps for synthesis of CN-5A.
MS (ESI): m/z [M+H]+, theoretical 589.4, found 589.5.
Tert-butanol (20 mL), SM5-3 (1.0 g, 3.77 mmol), tert-butyl acrylate (2.4 g, 18.9 mmol) and cesium carbonate (2.4 g, 7.5 mmol) were successively added to a flask, and under stirring, the reaction was gradually increased to 50° C. and then carried out for 20 h when TLC showed that the reaction was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the residue was added with 20 mL of dichloromethane, stirred for 0.5 h and filtered. The obtained crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 19/1 to 9/1) to obtain 0.58 g of a colorless transparent liquid with a yield of 39.1%.
MS (ESI): m/z [M+Na]+, theoretical 416.2, found 416.3.
Under N2 atmosphere, dichloromethane (2 mL), CN-1A (90 mg, 0.25 mmol), SM5-3-Z02 (100 mg, 0.25 mmol), EDCI (50 mg, 0.25 mmol), HOBt (35 mg, 0.25 mmol) and DIEA (50 mg, 0.38 mmol) were successively added to a flask and the reaction was then carried out under stirring at room temperature for 4 h when LCMS showed that the reaction was complete. The reaction solution was added with 10 mL of pure water and extracted with dichloromethane (10 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (10 mL), dried over anhydrous sodium sulfate, filtered and concentrated. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 2/1) to obtain 161 mg of a yellow oily liquid with a yield of 87.8%.
MS (ESI): m/z [M+Na]+, theoretical 745.4, found 745.3.
CN-8X-2 (100 mg, 0.14 mmol) was dissolved in 2 mL of tetrahydrofuran and added with Pd/C (10 mg, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 12 h when LCMS showed that the reaction was complete. The obtained mixture was filtered to remove the solid and the filtrate was concentrated under reduced pressure. The obtained crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 9/1) to obtain 68 mg of a yellow oily liquid with a yield of 83.5%.
MS (ESI): m/z [M+H]+, theoretical 589.4, found 589.4.
CN-8X-2 (60 mg, 0.083 mmol) and 2 mL of dichloromethane were added to a flask, and then added with trifluoroacetic acid (1.5 mL) under stirring at room temperature, and the reaction was then carried out under stirring or 6 h when LCMS showed that the reaction was complete. The solid was collected by filtration and purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 4/1) to obtain 26 mg of a product with a yield of 56.5%.
MS (ESI): m/z [M+H]+, theoretical 555.2, found 555.4.
Under N2 atmosphere, under stirring and at room temperature, SM4-Z01 (0.96 g, 3.0 mmol), CN-3A (1.1 g, 3.3 mmol), EDCI (0.88 g, 4.5 mmol), HOBt (0.49 g, 3.6 mmol) and DIEA (0.77 g, 6.0 mmol) were successively added to a flask containing dichloromethane (20 mL), and the reaction was then carried out for 12 h when TLC showed that the reaction was complete (dichloromethane/methanol, 10/1, Rf of the product: 0.8). The reaction solution was added with 50 mL of pure water and extracted with dichloromethane (50 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (50 mL), dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent. The residue was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 1/1) to obtain 1.32 g of a colorless oily product with a yield of 70%.
MS (ESI): m/z [M+H]+, theoretical 635.4, found 635.3.
CN-9X (1.07 g, 1.69 mmol) was added to a flask and dissolved with 1,4-dioxane (6 mL), and under stirring and at room temperature, 4 M HCl/1,4-dioxane solution (1 mL) was added, and then the reaction was carried out for 1 h when TLC showed that the reaction was complete (adjusted to about pH7, dichloromethane/methanol, 10/1, Rf of the product: 0.5). The obtained reaction solution was subjected to distillation under reduced pressure at room temperature to remove most of the solvent, added with 8% aqueous sodium bicarbonate solution (50 mL), stirred well, and extracted with dichloromethane (30 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent. The residue was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 9/1) to obtain 382 mg of a light yellow oily product with a yield of 42.3%.
MS (ESI): m/z [M+H]+, theoretical 535.3, found 535.5.
1H NMR (400 MHz, DMSO-d6) δ 3.99 (s, 2H), 3.96-3.92 (m, 3H), 3.91-3.84 (m, 1H), 3.72-3.58 (m, 3H), 3.57-3.44 (m, 4H), 3.43-3.29 (m, 4H), 1.99 (br s, 2H), 1.41 (s, 27H).
CN-9A (a HCl salt, 337 mg, 0.59 mmol) was added to a flask, dissolved with 20 mL of tetrahydrofuran, and successively added with 4 mL of pure water and sodium bicarbonate (60 mg, 0.71 mmol), and then under stirring, benzyl chloroformate (110 mg, 0.65 mmol) was slowly dropwise added, and the reaction was carried out for 1 h when TLC showed that the conversion of the raw materials was complete (petroleum ether/ethyl acetate, 1/1, Rf of the product: 0.4). The reaction solution was concentrated under reduced pressure, and the residue was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 2/1 to 1/1) to obtain 300 mg of a colorless oily product (a benzyl carbamate intermediate) with a yield of 76%.
MS (ESI): m/z [M+H]+, theoretical 669.4, found 669.3.
The obtained oily intermediate was dissolved in dichloromethane (4 mL), and under constant stirring and at room temperature, trifluoroacetic acid (1.54 g, 13.5 mmol) was slowly added, and then the reaction was carried out for 0.5 h when LCMS showed that the reaction was complete. The reaction solution was concentrated under reduced pressure to be oily and dried under vacuum at 50° C. for 1 h to obtain 240 mg of a white foamy product with a yield of 107% (the product contained some residual TFA and could be directly used in subsequent reaction without purification).
MS (ESI): m/z [M+H]+, theoretical 501.2, found 501.1.
1H NMR (400 MHz, DMSO-d6) δ 7.62 (d, J=8.2 Hz, 1H), 7.41-7.25 (m, 5H), 5.15-4.90 (m, 2H), 4.71 (q, J=7.3 Hz, 1H), 4.06-3.86 (m, 6H), 3.83-3.71 (m, 1H), 3.71-3.60 (m, 3H), 3.60-3.36 (m, 6H).
CN-3A (666 mg, 2.0 mmol) and 16 mL of dichloromethane were added to a flask, and successively added with SM6 (741 mg, 2.2 mmol), EDCI (576 mg, 3.0 mmol), HOBt (324 mg, 2.4 mmol) and DIEA (774 mg, 6 mmol) under stirring and under N2 atmosphere at room temperature. Then the reaction was carried out under stirring for 5 h when TLC showed that the conversion of the raw materials was complete (petroleum ether/ethyl acetate, 1/1, Rf of the product: 0.7). The reaction solution was added with 20 mL of pure water and extracted with dichloromethane (15 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution, dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent. The residue was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 2/1) to obtain 701 mg of a colorless oily product with a yield of 53.7%.
MS (ESI): m/z [M+H]+, theoretical 653.4, found 653.3.
CN-10X (698 mg, 1.07 mmol) and dichloromethane (9 mL) were successively added to a flask, and under constant stirring and at room temperature, trifluoroacetic acid (2.3 g, 20.1 mmol) was slowly added, and then the reaction was carried out for 4 h when TLC showed that the reaction was complete. The reaction solution was concentrated under reduced pressure to be oily and dried under vacuum at 50° C. for 1 h to obtain 630 mg of a yellow oily product with a yield of 121% (the product contained some residual TFA and could be directly used in subsequent reaction without purification).
MS (ESI): m/z [M+H]+, theoretical 485.2, found 485.0.
1H NMR (400 MHz, DMSO-d6) δ 7.52 (d, J=8.3 Hz, 1H), 7.39-7.25 (m, 5H), 5.08-4.94 (m, 2H), 4.51-4.38 (m, 1H), 4.02 (s, 2H), 3.99 (s, 2H), 3.73-3.57 (m, 5H), 3.53 (t, J=5.8 Hz, 2H), 3.34 (dt, J=12.5, 5.8 Hz, 1H), 2.26 (t, J=7.3 Hz, 2H), 1.89-1.76 (m, 1H), 1.76-1.58 (m, 1H).
CN-11X was obtained by subjecting CN-4A and SM6 as starting materials to the same amidation condensation reaction steps for synthesis of CN-10X.
MS (ESI): m/z [M+H]+, theoretical 681.4, found 681.5.
CN-11 was obtained by subjecting CN-11X as a starting material to the same de-tert-butylation reaction steps for synthesis of CN-10.
MS (ESI): m/z [M+H]+, theoretical 513.2, found 513.1.
SM3 (1.8 g, 17.1 mmol) and triethylamine (1.7 g, 17.1 mmol) were successively added to a flask containing tetrahydrofuran (12 mL), then cooled to 0-5° C. in an ice bath, and under constant stirring, chloroacetyl chloride (1.97 g, 17.4 mmol) was slowly added, and then the reaction was carried out for 1 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (20 mL), adjusted to about pH2 with 2 N hydrochloric acid, stirred at room temperature for 1 h and extracted with ethyl acetate (15 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution, dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent, and the residue was dried under vacuum to obtain 5.1 g of a light yellow oily product with a yield of 61%.
MS (ESI): m/z [M+H]+, theoretical 182.1, found 182.1.
Benzylethanolamine (3.4 g, 22.5 mmol), SM3-Z02 (4 g, 22.0 mmol), potassium carbonate (3.1 g, 22.5 mmol) and sodium iodide (3.3 g, 22.0 mmol) were successively added to a flask containing acetonitrile (30 mL). The reaction was allowed to gradually increase to 50° C. and then carried out under stirring for 6 h when LCMS showed that the reaction was substantially complete. The obtained reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the residue was added with ethyl acetate (30 mL), mixed well, washed with 26% aqueous sodium chloride solution (20 mL×3), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 1/1) to obtain 4.76 g of a light yellow oily product with a yield of 73%.
MS (ESI): m/z [M+H]+, theoretical 297.2, found 297.4.
CN-12X was obtained by subjecting SM3-Z03 and methyl bromoacetate as starting materials to similar substitution reaction steps for synthesis of CN-3X.
MS (ESI): m/z [M+H]+, theoretical 513.2, found 513.3.
CN-12X (0.7 g, 1.36 mmol) was added to a flask containing methanol (6 mL), cooled to 0° C. in an ice water bath, and then added with 4 N aqueous sodium hydroxide solution (6 mL) under constant stirring. The reaction was allowed to naturally increase to room temperature and then carried out under stirring when for 2 h LCMS showed that the reaction was complete. The obtained reaction solution was adjusted to about pH4 with 2 N hydrochloric acid and extracted with ethyl acetate (6 mL×3) to remove the aqueous phase. The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain 0.41 g of a light yellow oily liquid product with a yield of 64%.
MS (ESI): m/z [M−H]−, theoretical 469.2, found 469.0.
1H NMR (400 MHz, CD3OD) δ 7.35-7.22 (m, 5H), 3.88-3.79 (m, 6H), 3.70 (t, J=5.9 Hz, 4H), 3.66 (s, 2H), 3.66 (t, J=5.6 Hz, 2H), 3.41 (1, J=5.8 Hz, 4H), 3.31 (s, 2H), 2.74 (t, J=5.6 Hz, 2H),
CN-13X was obtained by subjecting SM3-Z03 and methyl 3-bromopropionate as starting materials to similar substitution reaction steps for synthesis of CN-4X.
MS (ESI): m/z [M+H]+, theoretical 555.3, found 555.2.
CN-13 was obtained by subjecting CN-13X as a starting material to similar demethylation reaction steps for synthesis of CN-12.
MS (ESI): m/z [M−H]−, theoretical 511.2, found 511.3.
1H NMR (400 MHz, CD3OD) δ 7.34-7.24 (m, 5H), 3.67 (s, 2H), 3.71-3.66 (m, 6H), 3.62-3.53 (m, 6H), 3.48-3.43 (m, 4H), 3.28 (s, 2H), 2.70 (t, J=5.8 Hz, 2H), 2.50-2.46 (m, 6H),
SM1-Z01 (2.0 g, 8.92 mmol), N-Boc-3-aminopropyl bromide (4.46 g, 18.7 mmol) and tetrabutylammonium bromide (1.44 g, 4.46 mmol) were successively added to a flask containing dichloromethane (30 mL), and then added with 37% aqueous sodium hydroxide solution (23 mL) under stirring at room temperature. The reaction was then carried out under stirring for 16 h when LCMS showed that the reaction was complete. The reaction solution was diluted with pure water (50 mL) and extracted with dichloromethane (20 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (40 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 10/1) to obtain 2.5 g of a colorless oily product with a yield of 52%.
MS (ESI): m/z [M+H]+, theoretical 539.3, found 539.4.
NC-1X (1.1 g, 2.04 mmol) was added to a flask containing dichloromethane (8 mL), and under constant stirring and at room temperature, trifluoroacetic acid (3 mL) was slowly added, and the reaction was then carried out for 2 h when LCMS showed that the reaction was completed. The reaction solution was concentrated under reduced pressure and dried under vacuum. The residue was dissolved in dichloromethane (15 mL), washed with 8% aqueous sodium bicarbonate solution (10 mL×3), dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent, thereby obtaining 0.57 g of a yellow oily product with a yield of 82%.
MS (ESI): m/z [M+H]+, theoretical 339.2, found 339.1.
NC-1B was obtained by subjecting NC-1X as a starting material to similar debenzylation reaction steps for synthesis of CN-2B.
MS (ESI): m/z [M+H]+, theoretical 449.3, found 449.3.
Under N2 atmosphere, NC-1B (1.0 g, 2.23 mmol) and N-methylmorpholine (0.45 g, 4.46 mmol) were successively added to a flask containing dichloromethane (12 mL), cooled to 0-5° C. in an ice bath, and slowly dropwise added with isobutyl chloroformate (0.31 g, 2.27 mmol). The reaction was then carried out under stirring for 1 h with the temperature maintained unchanged. The reaction was then added with SM8 (0.55 g, 2.23 mmol) and carried out under stirring at room temperature for 2 h when LCMS showed that the reaction was complete. The reaction solution was diluted with water (25 mL), adjusted to about pH4 with 2 N hydrochloric acid, and extracted with dichloromethane (12 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The crude product was crystallized with methyl tert-butyl ether to obtain 1.45 g of a light yellow solid product with a yield of 85%.
MS (ESI): m/z [M+H]+, theoretical 767.5, found 767.6.
NC-4, a HCl salt, was obtained by subjecting NC-4X as a starting material to the same de-tert-butoxycarbonylation reaction steps for synthesis of CN-6A.
MS (ESI): m/z [M+H]+, theoretical 467.3, found 467.2.
1H, NMR (400 MHz, DMSO-d6) δ 7.98 (br s, 9H), 7.63 (d, J=8.5 Hz, 1H), 7.35-7.26 (m, 5H), 5.10 (s, 2H), 4.23-4.17 (m, 1H), 3.54-3.50 (m, 4H), 3.49 (dd, J=12.8, 7.9 Hz, 4H), 3.05-2.96 (m, 2H), 2.92-2.84 (m, 4H), 2.07-1.96 (m, 4H), 1.80-1.65 (m, 4H), 1.61-1.55 (m, 2H), 1.17 (s, 3H).
NC-2X was obtained by subjecting CC-5X-Z01 and N-Boc-3-aminopropyl bromide as starting materials to the same substitution reaction steps for synthesis of NC-1X.
MS (ESI): m/z [M+H]+, theoretical 783.5, found 783.6.
NC-2 was obtained by subjecting NC-2X as a starting material to the same de-tert-butoxycarbonylation reaction steps for synthesis of NC-4.
MS (ESI): m/z [M+H]+, theoretical 483.3, found 483.4.
NC-5X was obtained by subjecting CC-5X-Z01 and N-Boc-bromoethylamine as starting materials to the same substitution reaction steps for synthesis of NC-1X.
MS (ESI): m/z [M+H]+, theoretical 741.4, found 741.4.
NC-5 was obtained by subjecting NC-5X as a starting material to the same de-tert-butoxycarbonylation reaction steps for synthesis of NC-4.
MS (ESI): m/z [M+H]+, theoretical 441.3, found 441.3.
NC-3X was obtained by subjecting CC-7X-Z01 and N-Boc-3-aminopropyl bromide as starting materials to the same substitution reaction steps for synthesis of NC-1X.
MS (ESI): m/z [M+H]+, theoretical 809.5, found 809.6.
NC-3, a HCl salt, was obtained by subjecting NC-3X as a starting material to the same de-tert-butoxycarbonylation reaction steps for synthesis of NC-4.
MS (ESI): m/z [M+H]+, theoretical 509.3, found 509.4.
1H NMR (400 MHz, DMSO-d6) δ 8.02 (br s, 9H), 7.34-7.27 (m, 5H), 5.22-5.16 (m, 2H), 4.54-4.51 (m, 1H), 4.44-4.40 (m, 1H), 3.61-3.49 (m, 10H), 2.92-2.84 (m, 7H), 2.40-2.33 (m, 1H), 2.23-2.18 (m, 1H), 2.05-1.96 (m, 7H), 1.20 (s, 3H).
NN-1X was obtained by subjecting SM3-Z01 and N-Boc-3-aminopropyl bromide as starting materials to the same substitution reaction steps for synthesis of NC-1X.
MS (ESI): m/z [M+H]+, theoretical 554.3, found 554.3.
NN-1A was obtained by subjecting NN-1X as a starting material to the same de-tert-butoxycarbonylation reaction steps for synthesis of NC-1A.
MS (ESI): m/z [M+H]+, theoretical 354.2, found 354.2.
NN-1B was obtained by subjecting NN-1X as a starting material to the same debenzylation reaction steps for synthesis of NC-1B.
MS (ESI): m/z [M+H]+, theoretical 420.3, found 420.3.
NN-0X was obtained by subjecting SM3-Z01 and N-Boc-bromoethylamine as starting materials to the same substitution reaction steps for synthesis of NC-1X.
MS (ESI): m/z [M+H]+, theoretical 526.3, found 526.3.
NN-0 was obtained by subjecting NN-0X as a starting material to the same debenzylation reaction steps for synthesis of NC-1B.
MS (ESI): m/z [M+H]+, theoretical 392.3, found 392.3.
NN-4X was obtained by subjecting SM3-Z03 and N-Boc-3-aminopropyl bromide as starting materials to the same substitution reaction steps for synthesis of NC-1X.
MS (ESI): m/z [M+H]+, theoretical 768.5, found 768.6.
NN-4 was obtained by subjecting NN-4X as a starting material to the same de-tert-butoxycarbonylation reaction steps for synthesis of NC-4.
MS (ESI): m/z [M+H]+, theoretical 468.4, found 468.5.
SM9-Z01 was obtained by subjecting SM9 and N-Boc-bromoethylamine as starting materials to the same substitution reaction steps for synthesis of SM4-Z01.
MS (ESI): m/z [M+H]+, theoretical 383.2, found 383.2.
SM9-Z02 was obtained by subjecting SM9 and N-Boc-3-aminopropyl bromide as starting materials to the same substitution reaction steps for synthesis of SM4-Z01.
MS (ESI): m/z [M+H]+, theoretical 397.2, found 397.3.
NN-2X-Z01 was obtained by subjecting SM9 and SM3 as starting materials to similar amidation condensation reaction steps for synthesis of CC-5X-Z01.
MS (ESI): m/z [M+H]+, theoretical 327.2, found 327.2.
NN-2X was obtained by subjecting SM9-Z01 and NN-1B as starting materials to similar amidation condensation reaction steps for synthesis of CN-9X.
MS (ESI): m/z [M+H]+, theoretical 756.4, found 756.5.
NN-2, a HCl salt, was obtained by subjecting NN-2X as a starting material to similar de-tert-butoxycarbonylation reaction steps for synthesis of CN-9A.
MS (ESI): m/z [M+H]+, theoretical 456.3, found 456.3.
1H NMR (400 MHz, DMSO-d6) δ 7.96 (br s, 9H), 7.55 (d, J=7.8 Hz, 1H), 7.40-7.26 (m, 5H), 5.13-4.92 (m, 2H), 4.65 (m, 1H), 3.79-3.54 (m, 10H), 3.60-3.36 (m, 6H), 3.17-3.02 (m, 6H).
NN-3X was obtained by subjecting SM9-Z02 and NN-1B as starting materials to similar amidation condensation reaction steps for synthesis of CN-9X.
MS (ESI): m/z [M+H]+, theoretical 798.5, found 798.7.
NN-3, a HCl salt, was obtained by subjecting NN-3X as a starting material to similar de-tert-butoxycarbonylation reaction steps for synthesis of CN-9A.
MS (ESI): m/z [M+H]+, theoretical 498.3, found 498.4.
CN-15 was obtained by subjecting NN-2X-Z01 and tert-butyl acrylate as starting materials to similar addition reaction steps for synthesis of CN-6X from CN-6X-Z01 and to the same de-tert-butylation reaction steps for synthesis of CN-6B.
MS (ESI): m/z [M−H]−, theoretical 541.2, found 541.1.
Under N2 atmosphere, SM4 (3.2 g, 15.6 mmol), benzyl 6-aminocaproate (3.45 g, 15.6 mmol), EDCI (3.87 g, 20.3 mmol), HOBt (2.1 g, 15.6 mmol) and DIEA (4.0 g, 31.2 mmol) were successively added to a flask containing dichloromethane (30 mL) and the reaction was carried out under stirring at room temperature for 6 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (60 mL) and extracted with dichloromethane (20 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (45 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a crude product. The crude product was crystallized and purified with ethyl acetate and methyl tert-butyl ether to obtain 3.5 g of a white solid product with a yield of 55%.
MS (ESI): m/z [M+Na]+, theoretical 431.2, found 431.4.
CL-1X was obtained by subjecting SM4-Z01 and benzyl 6-aminocaproate as starting materials to the same amidation condensation reaction steps for synthesis of C1-1X-Z01.
MS (ESI): m/z [M+H]+, theoretical 523.3, found 523.1.
CL-1A was obtained by subjecting CN-1X as a starting material to similar de-tert-butoxycarbonylation reaction steps for synthesis of CN-5A.
MS (ESI): m/z [M+H]+, theoretical 423.2, found 423.2.
(4) Synthesis of CL-1B (9-Fluorenylmethoxycarbonylation Protection and de-Tert-Butylation Reaction)
CL-1A (a TFA salt, 2.6 g, 4.85 mmol) and 8% aqueous sodium bicarbonate solution (15 mL) were successively added to a flask containing 1,4-dioxane (12 mL) and cooled to 0-5° C. in an ice bath, and under constant stirring, 9-fluorenylmethoxycarbonyl chloride (1.5 g, 5.82 mmol) was slowly added, and the reaction was then carried out for 16 h when LCMS showed that the reaction was completed. The reaction solution was added with pure water (20 mL) and extracted with ethyl acetate (15 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent. The crude product was crystallized with methyl tert-butyl ether to obtain a light yellow solid product, which was an intermediate with 9-fluorenylmethoxycarbonylated amino group. The solid was dissolved in dichloromethane (8 mL), and under constant stirring and at room temperature, trifluoroacetic acid (4 mL) was slowly added, and the reaction was then carried out for 4 h when LCMS showed that the reaction was completed. The reaction solution was concentrated under reduced pressure and dried under vacuum to obtain 2.17 g of a light yellow solid product with a yield of 76%.
MS (ESI): m/z [M+H]+, theoretical 589.3, found 589.4.
SM4-Z05 was obtained by subjecting SM4-Z01 as a starting material to similar de-tert-butoxycarbonylation reaction steps for synthesis of CL-1A.
MS (ESI): m/z [M+H]+, theoretical 220.1, found 220.1.
CL-2 was obtained by subjecting SM4-Z05 and monobenzyl dodecanediate as starting materials to similar amidation condensation reaction steps for synthesis of BL-8-Z01.
MS (ESI): m/z [M+H]+, theoretical 522.3, found 522.4.
CL-3A/B was synthesized by the same steps for synthesis of CL-1A/B, except that SM4-Z01 was replaced with SM4-Z04 and tert-butyl bromoacetate was replaced with tert-butyl 3-bromopropionate;
CL-4 was synthesized by the same steps for synthesis of CL-2, except that SM4-Z01 was replaced with SM4-Z04.
CL-5X-Z01 was obtained by subjecting SM5 and benzyl 6-aminocaproate as starting materials to the same amidation condensation reaction steps for synthesis of CL-1X-Z01.
MS (ESI): m/z [M+H]+, theoretical 435.2, found 435.3.
CL-5X was obtained by subjecting SM5-Z01 and benzyl 6-aminocaproate as starting materials to the same amidation condensation reaction steps for synthesis of CL-1X.
MS (ESI): m/z [M+H]+, theoretical 549.3, found 549.4.
CL-5A was obtained by subjecting CL-5X as a starting material to similar de-tert-butoxycarbonylation reaction steps for synthesis of CL-1A.
MS (ESI): m/z [M+H]+, theoretical 449.3, found 449.4.
CL-5B was obtained by subjecting CN-5A as a starting material to the same 9-fluorenylmethoxycarbonylation protection and de-tert-butylaton reaction steps for synthesis of CL-1B.
MS (ESI): m/z [M+H]+, theoretical 615.3, found 615.3.
SM5-Z05 was obtained by subjecting SM5-Z01 as a starting material to similar de-tert-butoxycarbonylation reaction steps for synthesis of SM4-Z05.
MS (ESI): m/z [M+H]+, theoretical 246.1, found 246.2.
SM10 (3.62 g, 20 mmol), monobenzyl dodecanediate (6.4 g, 20 mmol), EDCI (4.22 g, 22 mmol) and HOBt (3 g, 22 mmol) were successively added to a flask containing dichloromethane (80 mL), and added slowly with DIEA (6.45 g, 50 mmol) under stirring at room temperature, and the reaction was carried out under stirring for 8 h when TLC showed that the raw materials was completely converted (dichloromethane/methanol, 10/1, Rf of the product: 0.4). The reaction solution was added with pure water (120 mL) and extracted with dichloromethane (50 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (120 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a yellow oily liquid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 10/1 to 5/1) to obtain 6.8 g of a colorless transparent oily liquid product with a yield of 76%.
MS (ESI): m/z [M+Na]+, theoretical 470.2, found 470.2.
Under N2 atmosphere and in an ice water bath, sodium hydride (60%, 1.4 g, 36.2 mmol) was slowly added to tert-butyl bromoacetate (9.4 g, 48.3 mmol) and tetrabutylammonium iodide (0.4 g, 1.2 mmol) in tetrahydrofuran (70 mL) in batches. The reaction was allowed to increase to room temperature and then carried out under stirring for 0.5 h. The reaction was then added with CL-6-Z01 (5.4 g, 12.1 mmol) dissolved in tetrahydrofuran (50 mL) within 0.5 h, and carried out under stirring for 20 h when LCMS showed that the reaction was complete. The reaction solution was slowly added to 25% aqueous ammonium chloride solution (180 mL) cooled in an ice bath of 0-5° C. to quench the reaction, and extracted with ethyl acetate (80 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (100 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain 10 g of a yellow liquid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 7/3) to obtain 4.6 g of a colorless transparent oily liquid product with a yield of 67.8%.
MS (ESI): m/z [M+Na]+, theoretical 562.3, found 562.4.
1H NMR (400 MHz, DMSO-d6) δ 7.40-7.29 (m, 5H), 5.08 (s, 2H), 4.28-4.20 (m, 2H), 4.04 (s, 2H), 3.70-3.62 (m, 2H), 3.60 (s, 3H), 2.34 (t, J=7.4 Hz, 2H), 2.31-2.12 (m, 3H), 2.00-1.87 (m, 1H), 1.59-1.49 (m, 2H), 1.49-1.44 (m, 2H), 1.42 (s, 9H), 1.28-1.18 (m, 12H).
CL-6X (4.6 g, 8.2 mmol) was added to a flask containing tetrahydrofuran (46 mL) and stirred until the reaction mixture became clear. The reaction was cooled to 0° C., followed by addition of 5 N aqueous lithium hydroxide solution (23 mL). The reaction was allowed to increase to room temperature and then carried out under stirring for 1 h when LCMS showed that the reaction was completed. The reaction solution was adjusted to about pH4 with 20% aqueous KHSO4 solution and extracted with ethyl acetate (50 mL×3) to remove the aqueous phase. The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (100 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain 4.5 g of a yellow liquid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 95/5) to obtain 2.8 g of a colorless transparent oily liquid product with a yield of 62.5%.
MS (ESI): m/z [M+Na]+, theoretical 548.3, found 548.5.
CL-7A and CL-7B were synthesized by the same steps for synthesis of CL-5A and CL-5B, respectively, except that SM5-Z01 was replaced with SM5-Z04 and tert-butyl bromoacetate was replaced with tert-butyl 3-bromopropionate.
CL-8 was synthesized by the same steps for synthesis of CL-6, except that SM5-Z01 was replaced with SM5-Z04.
GN-1 and GN-2 were synthesized according to the method disclosed in patent WO2021153687A1; GC-0 and GC-1 were synthesized according to the method disclosed in patent CN114716489A.
Under N2 atmosphere, GN-1 (8.5 g, 19.6 mmol), CN-1B (3.4 g, 9.3 mmol), EDCI (4.4 g, 23.3 mmol) and HOBt (2.6 g, 19.6 mmol) were successively added to a flask containing dichloromethane (45 mL) and stirred at room temperature until the reaction mixture became clear. Then the reaction was added with DIEA (4.8 g, 37.2 mmol) and carried out under stirring for 4 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (50 mL) and extracted with dichloromethane (20 mL×4). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (50 mL), dried over anhydrous sodium sulfate, filtered and concentrated. The obtained yellow oily product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 40/1) to obtain 7.04 g of a white solid with a yield of 63%.
MS (ESI): m/z [M+H]+, theoretical 1202.5, found 1202.6.
1H NMR (400 MHz, DMSO-d6), δ 7.91 (t, J=5.7 Hz, 2H), 7.84 (d, J=9.2 Hz, 2H), 7.40-7.28 (m, 5H), 7.15 (d, J=8.2 Hz, 1H), 5.21 (d, J=3.4 Hz, 2H), 5.04-4.94 (m, 4H), 4.54 (d, J=8.5 Hz, 2H), 4.03 (s, 6H), 3.92-3.83 (m, 2H), 3.82-3.74 (m, 2H), 3.73-3.64 (m, 1H), 3.62-3.53 (m 6H), 3.53-3.44 (m, 4H), 3.40-3.30 (m, 10H), 3.23-3.13 (m, 4H), 2.31 (t, J=6.5 Hz, 4H), 2.10 (s, 6H), 1.99 (s, 6H), 1.89 (s, 6H), 1.77 (s, 6H).
GN-3-Z01 (7.0 g, 5.8 mmol) was dissolved in tetrahydrofuran (30 mL) and added with Pd/C (0.7 g, 10 wt %). The reaction system was replaced with hydrogen for three times and then the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 3 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid and the filtrate was concentrated to obtain 5.89 g of a white solid product with a yield of 95%.
MS (ESI): m/z [M+H]+, theoretical 1068.5, found 1068.6.
Under N2 atmosphere and at room temperature, GN-1 (9.1 g, 20.9 mmol), CN-2B (3.8 g, 9.97 mmol), EDCI (4.76 g, 24.9 mmol) and HOBt (2.8 g, 20.9 mmol) were successively added to a flask containing dichloromethane (50 mL) and stirred at room temperature until the reaction mixture became clear. The reaction was added with DIEA (5.14 g, 39.9 mmol) and then carried out under stirring for 5 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (50 mL) and extracted with dichloromethane (20 mL×4). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (60 mL), dried over anhydrous sodium sulfate, filtered and concentrated. The obtained yellow oily product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 40/1) to obtain 8.2 g of a white solid with a yield of 68%.
MS (ESI): m/z [M+H]+, theoretical 1216.5, found 1216.3.
GN-4-Z01 (7.6 g, 6.25 mmol) was dissolved in tetrahydrofuran (30 mL) and added with Pd/C (0.8 g, 10 wt %). The reaction system was replaced with hydrogen for three times and then the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 3 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid and the filtrate was concentrated to obtain 6.63 g of a white solid product with a yield of 98%.
MS (ESI): m/z [M+H]+, theoretical 1081.5, found 1081.3.
Under N2 atmosphere and at room temperature, GN-1 (6.8 g, 15.7 mmol), CN-3B (2.65 g, 7.45 mmol), EDCI (3.56 g, 18.6 mmol) and HOBt (2.1 g, 15.7 mmol) were successively added to a flask containing dichloromethane (40 mL) and stirred at room temperature until the reaction mixture became clear. The reaction was added with DIEA (3.84 g, 29.8 mmol) and then carried out under stirring for 5 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (50 mL) and extracted with dichloromethane (20 mL×4). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (40 mL), dried over anhydrous sodium sulfate, filtered and concentrated. The obtained crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 40/1) to obtain 4.69 g of a white solid with a yield of 53%.
MS (ESI): m/z [M+Na]+, theoretical 1210.5, found 1210.7.
GN-5-Z01 (4.6 g, 3.87 mmol) was dissolved in tetrahydrofuran (30 mL) and successively added with trifluoroacetic acid (0.43 g, 3.8 mmol) and Pd/C (0.46 g, 10 wt %). The reaction system was replaced with hydrogen for three times and then the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 3 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid and the filtrate was concentrated to obtain 4.16 g of a light yellow solid product (a TFA salt) with a yield of 92%.
MS (ESI): m/z [M+H]+, theoretical 1054.5, found 1054.8.
Under N2 atmosphere, dichloromethane (80 mL), GN-1 (10.2 g, 23.5 mmol), CC-1A (4.0 g, 11.8 mmol), EDCI (6.8 g, 35.3 mmol) and HOBt (3.2 g, 23.5 mmol) were successively added to a flask and stirred at room temperature until the reaction mixture became clear. The reaction was added with DIEA (6.1 g, 47.0 mmol) and then carried out under stirring for 3 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (80 mL) and extracted with dichloromethane (40 mL×4). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (80 mL), dried over anhydrous sodium sulfate, filtered and concentrated. The obtained yellow oily product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 49/1) to obtain 6.9 g of a white solid with a yield of 50%.
MS (ESI): m/z [M+Na]+, theoretical 1195.5, found 1195.5.
1H NMR (500 MHz, CDCl3) δ 7.39-7.29 (m, 5H), 7.24-7.14 (m, 2H), 6.66 (dd, J=32.7, 8.0 Hz, 2H), 5.36-5.33 (m, 2H), 5.32-5.23 (m, 2H), 5.19 (s, 2H), 4.77 (t, J=9.7 Hz, 2H), 4.17-4.07 (m, 5H), 4.04-3.98 (m, 4H), 3.95-3.88 (m, 4H), 3.76 (dd, J=8.9, 1.9 Hz, 2H), 3.73-3.69 (m, 2H), 3.67 (d, J=10.3 Hz, 2H), 3.62-3.57 (m, 4H), 3.54-3.51 (m, 4H), 3.48-3.41 (m, 2H), 3.17-3.12 (m, 6H), 2.13 (s, 6H), 2.03 (s, 6H), 1.98 (s, 6H), 1.94 (s, 6H), 1.26 (s, 3H).
GC-3-Z01 (2.7 g, 2.3 mmol) was dissolved in tetrahydrofuran (27 mL) and added with Pd/C (0.25 g, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 1.5 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid and the filtrate was concentrated to obtain 2.1 g of a white solid product with a yield of 84.3%.
MS (ESI): m/z [M+Na]+, theoretical 1105.4, found 1105.6.
1H NMR (400 MHz, DMSO-d6) δ 7.80 (dd, J=9.2, 2.9 Hz, 2H), 7.65 (t, J=5.8 Hz, 2H), 5.17 (d, J=3.4 Hz, 2H), 4.94 (dd, J=11.3, 3.3 Hz, 2H), 4.51 (d, J=8.4 Hz, 2H), 4.01-3.95 (m, 6H), 3.88-3.78 (m, 6H), 3.74 (dt, J=10.0, 5.0 Hz, 2H), 3.59-3.52 (m, 4H), 3.51-3.47 (m, 4H), 3.47-3.43 (m, 3H), 3.42-3.35 (m, 4H), 3.24-3.19 (m, 4H), 2.06 (s, 6H), 1.97-1.94 (m, 6H), 1.85 (s, 6H), 1.73 (s, 6H), 1.32 (s, 3H), 1.08 (s, 3H).
GC-3L was synthesized by the same steps for synthesis of GC-3, except that GN-1 was replaced with GN-2.
GC-4 was synthesized by the same steps for synthesis of GC-3, except that CC-1A was replaced with CC-2A.
GN-3L and GN-4L were synthesized by the same steps for synthesis of GN-3 and GN-4, respectively, except that GN-1 was replaced with GN-2.
GN-6 was synthesized by the same steps for synthesis of GN-3, except that CN-3B was replaced with CN-4B.
Under N2 atmosphere, CN-5A (1.02 g, 1.86 mmol) was added to a flask and dissolved with 30 mL of dichloromethane, then successively added with monobenzyl dodecanediate (0.71 g, 2.2 mmol), triethylamine (0.56 g, 5.5 mmol), EDCI (0.71 g, 3.7 mmol) and DMAP (0.11 g, 0.9 mmol). The reaction was carried out under stirring at room temperature for 5 h when TLC showed that the raw materials were completely converted (petroleum ether/ethyl acetate, 1/1, Rf of the product: 0.5). The reaction solution was diluted with 50 mL of dichloromethane and washed with 26% aqueous sodium chloride solution (50 mL×3). The obtained organic phase was dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 10/1 to 1/1) to obtain 601 mg of a colorless oily product with a yield of 38%.
MS (ESI): m/z [M+H]+, theoretical 851.5, found 851.5.
BL-1-Z01 (596 mg, 0.7 mmol) was added to a flask, and added with 3 mL of trifluoroacetic acid. The reaction was carried out under stirring at room temperature for 12 h when TLC showed that the conversion of the raw materials was complete (dichloromethane/methanol, 10/1, Rf of the product: 0.1). The reaction solution was diluted with 25 mL of acetonitrile, subjected to distillation under reduced pressure to remove the solvent and dried under vacuum to obtain 525 mg of a yellow oily product with a yield of 114% (the product contained some residual TFA and could be directly used in subsequent reaction without purification).
MS (ESI): m/z [M+H]+, theoretical 683.3, found 683.7.
Under N2 atmosphere, dichloromethane (8 mL), BL-1 (100 mg, 0.146 mmol), GN-1 (210 mg, 0.48 mmol), PyBOP (291 mg, 0.56 mmol) and triethylamine (90 mg, 0.89 mmol) were successively added to a flask, and the reaction was carried out under stirring at room temperature for 6 h when TLC showed that the conversion of the raw materials was complete (dichloromethane/methanol, 10/1, Rf of the product: 0.4). The reaction solution was added with pure water (15 mL) and extracted with dichloromethane (7 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent. The residue was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 100/1 to 20/1) to obtain 202 mg of a light yellow solid with a yield of 68%.
MS (ESI): m/z [1/2M+H]+, theoretical 966.4, found 966.4.
1H NMR (400 MHz, DMSO-d6) δ 8.10 (d, J=8.2 Hz, 1H), 7.97-7.87 (m, 3H), 7.84 (d, J=9.2 Hz, 3H), 7.74 (t, J=6.0 Hz, 1H), 7.46-7.20 (m, 5H), 5.21 (d, J=3.3 Hz, 3H), 5.07 (s, 2H), 4.97 (dd, J=11.2, 3.4 Hz, 3H), 4.59-4.48 (m, 4H), 4.06-4.00 (m, 10H), 3.96-3.83 (m, 6H), 3.82-3.74 (m, 3H), 3.63-3.53 (m, 10H), 3.52-3.45 (m, 6H), 3.44-3.41 (m, 2H), 3.36-3.28 (m), 4H), 3.28-3.12 (m, 6H), 2.36-2.23 (m, 6H), 2.17-2.12 (m, 2H), 2.10 (s, 9H), 1.99 (s, 10H), 1.89 (s, 9H), 1.77 (s, 9H), 1.50 (d, J=17.2 Hz, 4H), 1.26-1.20 (m, 14H).
TC01A-Z01 (101 mg, 0.05 mmol) was added to a flask, dissolved with 3 mL of tetrahydrofuran, and added with Pd/C (10 mg, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 12 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid and the filtrate was concentrated to obtain 78 mg of a white solid product with a yield of 81%.
MS (ESI): m/z [1/2M+H]+, theoretical 921.4, found 921.4.
Under N2 atmosphere and at room temperature, TC01A (20 mg, 0.0109 mmol) and DIEA (20 μL) were successively added to a flask containing dry dichloromethane (2 mL), and under constant stirring, pentafluorophenyl trifluoroacetate (12 mg, 0.0436 mmol) was added, and then the reaction was carried out for 0.5 h when LCMS showed that the conversion of the raw materials was complete. The reaction solution was added with dichloromethane (8 mL) and washed with 8% aqueous sodium bicarbonate solution (6 mL×7). The obtained organic phase was dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a white solid crude product. The crude product was purified by recrystallization (acetonitrile/methyl tert-butyl ether, 1/2) to obtain 14 mg of a white solid product with a yield of 64%.
MS (ESI): m/z [1/2M+H]+, theoretical 1004.4, found 1004.2.
Cy5-EtN was synthesized by the method reported in Org. Biomol. Chem., 2012, 10, 710-715.
Under N2 atmosphere, TC01A (78 mg, 0.04 mmol) was added to a flask, dissolved with 2 mL of dichloromethane, and successively added with Cy5-EtN (31 mg, 0.06 mmol), PyBOP (28 mg, 0.05 mmol) and triethylamine (12 mg, 0.12 mmol). The reaction was then carried out under stirring at room temperature for 3 h when LCMS showed that the reaction was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 100/1 to 10/1) to obtain 65 mg of a blue solid with a yield of 68%.
MS (ESI): m/z [1/3 (M+2H)]+, theoretical 788.4, found 788.1; m/z [1/2 (M−Cl+H)]+, theoretical 1182.1, found 1181.9.
TC01A-Cy5-01 (65 mg, 0.03 mmol) and methanol (1.8 mL) were added to a flask and stirred until the reaction mixture became clear, followed by addition of 25% ammonia water (0.2 mL). The reaction was increased to 40° C., and then carried out under stirring for 2.5 h when LCMS showed that the reaction was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent. The residue was purified by prep-HPLC (C18/5 μm, column temperature: 40° C.; water/acetonitrile, 95/5 to 5/95, containing 0.1% formic acid) to obtain 8.8 mg of a blue solid product with a yield of 16.1% and a purity of 99.89% (630 nm).
MS (ESI): m/z [1/2 (M−Cl+H)]+, theoretical 993.0, found 992.8.
Under N2 atmosphere, dichloromethane (8 mL), BL-1 (303 mg, 0.44 mmol), GN-2 (694 mg, 1.45 mmol), PyBOP (460 mg, 1.76 mmol) and triethylamine (90 mg, 2.64 mmol) were successively added to a flask and the reaction was carried out under stirring at room temperature for 6 h when TLC showed that the conversion of the raw materials was complete (dichloromethane/methanol, 10/1, Rf of the product: 0.4). The reaction solution was added with pure water (12 mL) and extracted with dichloromethane (8 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent. The residue was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 100/1 to 20/1) to obtain 517 mg of a light yellow solid product with a yield of 57%.
MS (ESI): m/z [1/2M+H]+, theoretical 1033.0, found 1032.9.
TC07A-Z01 (200 mg, 0.10 mmol) was added to a flask and dissolved with 6 mL of tetrahydrofuran, followed by addition of Pd/C (20 mg, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 12 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid and the filtrate was concentrated to obtain 180 mg of a white solid product with a yield of 94%.
MS (ESI): m/z [1/2M+H]+, theoretical 987.5, found 987.7.
1H NMR (400 MHz, DMSO-d6) δ 8.12 (d, J=8.1 Hz, 1H), 7.98-7.88 (m, 3H), 7.85 (d, J=9.2 Hz, 3H), 7.75 (t, J=6.0 Hz, 1H), 5.22 (d, J=3.3 Hz, 3H), 4.98 (dd, J=11.2, 3.4 Hz, 3H), 4.61-4.50 (m, 4H), 4.08-4.03 (m, 10H), 3.98-3.82 (m, 6H), 3.82-3.65 (m, 9H), 3.64-3.46 (m, 22H), 3.43-3.40 (m, 2H), 3.37-3.29 (m, 4H), 3.28-3.12 (m, 6H), 2.38-2.28 (m, 6H), 2.19-2.15 (m, 2H), 2.11 (s, 9H), 1.98 (s, 10H), 1.90 (s, 9H), 1.76 (s, 9H); 1.55 (d, J=17.2 Hz, 4H), 1.27-1.22 (m, 14H).
Under N2 atmosphere, TC07A (40 mg, 0.0203 mmol) and DIEA (30 μL) were successively added to a flask containing dry dichloromethane (3 mL), and under constant stirring, pentafluorophenyl trifluoroacetate (17 mg, 0.061 mmol) was added, and the reaction was then carried out for 0.5 h when LCMS showed that the conversion of the raw materials was complete. The reaction solution was added with dichloromethane (10 mL) and washed with 8% aqueous sodium bicarbonate solution (6 mL×7). The obtained organic phase was dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a white solid crude product. The crude product was purified by recrystallization (acetonitrile/methyl tert-butyl ether, 1/2) to obtain 22 mg of a white solid product with a yield of 50%.
MS (ESI): m/z [1/2M+Na]+, theoretical 1092.4, found 1092.5.
Under N2 atmosphere, TC07A (130 mg, 0.06 mmol) was added to a flask and dissolved with 2 mL of dichloromethane, and then successively added with Cy5-EtN (35 mg, 0.06 mmol), PyBOP (44 mg, 0.08 mmol) and triethylamine (20 mg, 0.2 mmol). The reaction was carried out under stirring at room temperature for 4 h when LCMS showed that the reaction was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 100/1 to 10/1) to obtain 46 mg of a solid with a yield of 31%.
MS (ESI): m/z [1/3 (M−Cl+2H)]+, theoretical 832.4, found 832.1.
TC07A (45 mg, 0.018 mmol) and methanol (1.8 mL) were added to a flask and stirred until the reaction mixture became clear, followed by addition of 25% ammonia (0.2 mL). The reaction was increased to 40° C., and then carried out under stirring for 3 h when LCMS showed that the reaction was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the residue was purified by prep-HPLC (C18/5 μm, column temperature: 40° C.; water/acetonitrile, 95/5 to 5/95, containing 0.1% formic acid), to obtain 6.3 mg of a blue solid product with a yield of 16.6% and a purity of 99.5% (630 nm).
MS (ESI): m/z [1/2(M-Cl+H)]+, theoretical 1059.1, found 1059.0.
Under N2 atmosphere and at room temperature, CN-6B (340 mg, 0.643 mmol), GN-2 (954 mg, 1.99 mmol), PyBOP (1.14 g, 2.19 mmol) and triethylamine (390 mg, 3.86 mmol) were successively added to a flask containing dichloromethane (14 mL) and then the reaction was carried out stirring at room temperature for 6 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (15 mL) and extracted with dichloromethane (10 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent. The residue was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 20/1) to obtain 675 mg of a light yellow solid product with a yield of 55%.
MS (ESI): m/z [1/2M+H]+, theoretical 955.4, found 955.5.
TC02A-Z01 (155 mg, 0.0812 mmol) was added to a flask, dissolved with 5 mL of tetrahydrofuran, and added with Pd/C (20 mg, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid and the filtrate was concentrated to obtain 130 mg of a white solid product with a yield of 90%.
MS (ESI): m/z [1/2M+H]+, theoretical 888.4, found 888.5.
Under N2 atmosphere, dichloromethane (3 mL), TC02A-Z02 (65 mg, 0.0366 mmol), succinic anhydride (11 mg, 0.11 mmol) and triethylamine (15 mg, 0.15 mmol) were successively added to a flask and the reaction was carried out under stirring at room temperature for 5 h when TLC showed that the conversion of the raw materials was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the obtained crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 5/1) obtain 51.5 mg of a white solid product with a yield of 75%.
MS (ESI): m/z [1/2M+Na]+, theoretical 960.4, found 960.6.
1H NMR (400 MHz, DMSO-d6) δ 8.18 (d, J=8.1 Hz, 1H), 7.92-7.87 (m, 2H), 7.85 (d, J=9.2 Hz, 3H), 7.75-7.70 (m, 2H), 5.24 (d, J=3.3 Hz, 3H), 4.99 (dd, J=11.2, 3.4 Hz, 3H), 4.63-4.52 (m, 4H), 4.09-4.05 (m, 8H), 4.00-3.84 (m, 6H), 3.82-3.65 (m, 11H), 3.64-3.46 (m, 22H), 3.44-3.41 (m, 2H), 3.38-3.30 (m, 4H), 3.27-3.13 (m, 6H), 2.47-2.40 (m, 2H), 2.39-2.29 (m, 8H), 2.13 (s, 9H), 1.99 (s, 9H), 1.92 (s, 9H), 1.78 (s, 9H).
Under N2 atmosphere, CL-7A (0.78 g, 1.69 mmol) and triethylamine (0.34 g, 3.37 mmol) were added to a flask containing dichloromethane (8 mL), and under stirring, N,N′-carbonyldiimidazole (0.29 g, 1.77 mmol) was slowly added, and the reaction was then carried out for 1 h. The reaction was then added with CN-1A (0.61 g, 1.77 mmol) and carried out under stirring at room temperature for 8 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (10 mL) and extracted with dichloromethane (8 mL×3). The obtained organic phases were combined, washed with 26% saturated saline solution (15 mL), dried over anhydrous sodium sulfate, filtered and concentrated. The obtained crude product was crystallized with methyl tert-butyl ether to obtain 0.79 g of a light yellow solid product with a yield of 56%.
MS (ESI): m/z [M+H]+, theoretical 836.5, found 836.5.
BL-2 was obtained by subjecting BL-2-Z01 as a starting material to the same de-tert-butylation reaction steps for synthesis of BL-1.
MS (ESI): m/z [M−H]−, theoretical 666.3, found 666.4.
TC03A-Z01 was obtained by subjecting BL-2 and GN-2 as starting materials to the same amidation condensation reaction steps for synthesis of TC01A-Z01.
MS (ESI): m/z [M−H]−, theoretical 1025.0, found 1024.9.
TC03A was obtained by subjecting TC03A-Z01 as a starting material to the same debenzylation reaction steps for synthesis of TC01A.
MS (ESI): m/z [1/2M+H]+, theoretical 979.9, found 979.9.
1H NMR (400 MHz, DMSO-d6) δ 7.70-7.58 (m, 4H), 7.49 (m, 3H), 6.98 (d, J=7.5 Hz, 1H), 5.20 (d, J=3.1 Hz, 3H), 4.95 (dd, J=11.0, 3.2 Hz, 3H), 4.53 (d, J=8.4 Hz, 3H), 4.46-4.28 (m, 1H), 4.17-4.10 (m, 1H), 4.07-3.98 (m, 7H), 3.92-3.84 (m, 6H), 3.82-3.72 (m, 9H), 3.70-3.53 (m, 18H), 3.53-3.44 (m, 7H), 3.43-3.37 (m, 9H), 3.31-3.13 (m, 9H), 2.50-2.42 (m, 6H), 2.38-2.25 (m, 3H), 2.17-2.10 (m, 1H), 2.06 (s, 9H), 1.98 (s, 9H), 1.87 (s, 9H), 1.80 (s, 9H), 1.60-1.47 (m, 4H), 1.41-1.31 (m, 2H).
Under N2 atmosphere, dichloromethane (100 mL), dimethyl 5-aminoisophthalate (2.09 g, 10.0 mmol), monomethyl 5-nitroisophthalate (3.37 g, 15.0 mmol), EDCI (2.9 g, 10 mmol), HOBt (2.0 g, 15.0 mmol) and DIEA (1.9 g, 15.0 mmol) were successively added to a flask and the reaction was carried out under stirring at room temperature for 3 h when TLC showed disappearance of the raw material dimethyl 5-aminoisophthalate (dichloromethane/anhydrous methanol, 10/1, Rf of the product: 0.8). The reaction solution was added with pure water (200 mL) and extracted with dichloromethane (200 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (300 mL), dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent, thereby obtaining a yellow oily crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/ethyl acetate, 50/1), and the obtained solid was crystallized with ethyl acetate (30 mL) to obtain 2.77 g of a white solid with a yield of 67%.
MS (ESI): m/z [M+H]+, theoretical 417.1, found 417.1.
Tetrahydrofuran (40 mL) and CN-14-Z01 (2.77 g, 6.65 mmol) were successively added to a flask and stirred constantly, followed by slow addition of LiOH monohydrate (1.67 g, 40 mmol) dissolved in pure water (40 mL) at room temperature. The reaction was then carried out under stirring for 1 h when LCMS showed that the reaction was complete. The reaction solution was slowly added with 10% aqueous HCl solution (100 mL) under stirring, resulting in precipitation of a small amount of white floccules, and then extracted with ethyl acetate (200 mL×2). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent, thereby obtaining 2.44 g of a white solid product with a yield of 98%.
MS (ESI): m/z [M−H]+, theoretical 373.0, found 373.0.
Under N2 atmosphere, dichloromethane (20 mL), CN-14 (164 mg, 0.44 mmol), GN-2 (956 mg, 2 mmol), EDCI (506 mg, 2.64 mmol), triethylamine (266 mg, 2.64 mmol) and DMAP (53 mg, 0.44 mmol) were successively added to a flask and the reaction was carried out under stirring at room temperature for 16 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (100 mL) and extracted with dichloromethane (50 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 10/1) to obtain 280 mg of a white solid product with a yield of 36%.
MS (ESI): m/z [1/2M+H]+, theoretical 878.3, found 878.6.
TC04A-Z01 (280 mg, 0.159 mmol), Pd/C (28 mg, 10 wt %), methanol (5 mL) and tetrahydrofuran (5 mL) were successively added to a flask. The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when TLC showed that the conversion of the raw materials was complete. The reaction mixture was filtered to remove solid and the filtrate was concentrated to obtain 140 mg of a white solid product with a yield of 51%.
MS (ESI): m/z [1/2M+H]+, theoretical 863.3, found 863.5.
TC04A-Z02 (120 mg, 0.0695 mmol) and 3-hydroxypropionic acid (11 mg, 0.083 mmol) were successively added to a flask containing methanol (40 mL), followed by addition of DMT-MM monohydrate (41 mg, 0.139 mmol) under constant stirring. The reaction was then carried out under stirring at room temperature for 6 h when LCMS showed that the reaction was complete. The reaction solution was concentrated under reduced pressure, and the obtained crude product was directly purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 15/1) to obtain 101 mg of a white solid product with a yield of 81%.
MS (ESI): m/z [1/2M+H]+, theoretical 899.4, found 899.4.
Under N2 atmosphere, TC04A (90 mg, 0.05 mmol) and triethylamine (10 mg, 0.1 mmol) were successively added to a flask containing dichloromethane (3 mL), followed by addition of 2-cyanoethyl-N,N-diisopropylchlorophosphoramidite (18 mg, 0.075 mmol) in an ice bath of 0-5° C. The reaction was then carried out under stirring for 0.5 h when LCMS showed that the reaction was complete. The reaction solution was added with 8% aqueous sodium bicarbonate solution (10 mL) to quench the reaction, and extracted with dichloromethane (8 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The crude product was crystallized with ethyl acetate and methyl tert-butyl ether successively to obtain 58 mg of a white solid product with a yield of 58%.
MS (ESI): m/z [1/2M+H]+, theoretical 999.4, found 999.5.
Under N2 atmosphere, CL-3B (1.5 g, 2.49 mmol), GN-1 (1.08 g, 2.49 mmol), EDCI (0.62 g, 3.24 mmol), HOBt (0.34 g, 2.49 mmol) and triethylamine (0.5 g, 4.98 mmol) were successively added to a flask containing dichloromethane (16 mL) and the reaction was carried out under stirring at room temperature for 6 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (20 mL) and extracted with dichloromethane (15 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 30/1) to obtain 2.16 g of a white solid product with a yield of 85%.
MS (ESI): m/z [M+H]+, theoretical 1019.4, found 1019.4.
GL-2-Z01 (1.8 g, 1.77 mmol) was added to a flask containing N,N-dimethylformamide (10 mL), followed by addition of 1 M tetrabutylammonium fluoride in tetrahydrofuran (3.5 mL) under stirring, and then the reaction was carried out under stirring at room temperature for 6 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (40 mL) and extracted with dichloromethane (15 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (15 mL×3), dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent. The obtained crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 20/1) to obtain 1.13 g of a white solid product with a yield of 80%.
MS (ESI): m/z [M+H]+, theoretical 797.4, found 797.6.
Under N2 atmosphere, GC-1 (1.6 g, 3.15 mmol) and N-methylmorpholine (0.64 g, 6.3 mmol) were successively added to a flask containing dichloromethane (12 mL) and cooled to 0-5° C. in an ice bath, followed slow dropwise addition of isobutyl chloroformate (0.45 g, 3.3 mmol). The reaction was then carried out under stirring for 1 h with the temperature maintained unchanged. Then the reaction was added with 3,5-diaminobenzoic acid (0.24 g, 1.57 mmol) and then carried out under stirring at room temperature for 2 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (20 mL), adjusted to about pH7 with 0.5 N hydrochloric acid, and extracted with dichloromethane (15 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The crude product was crystallized with methyl tert-butyl ether to obtain 1.54 g of a light yellow solid product with a yield of 87%.
MS (ESI): m/z [M+H]+, theoretical 1131.4, found 1131.5.
TC05A-Z01 was obtained by subjecting GC-2 and GL-2 as starting materials to the same amidation condensation reaction steps for synthesis of GL-2-Z01.
MS (ESI): m/z [1/2M+H]+, theoretical 944.4, found 955.6.
TC05A was obtained by subjecting TC05A-Z01 as a starting material to the same debenzylation reaction steps for synthesis of TC07A.
MS (ESI): m/z [1/2M+H]+, theoretical 910.4, found 910.5.
Synthesis of TC06A: (1) TC06A-Z01 was obtained by rapid amidation reaction of 1-Boc-4-amino piperidine as a starting material with chloroacetyl chloride; (2) mono-substituted product TC06A-Z02 and di-substituted product TC06A-Z03 were obtained by subjecting TC06A-Z01 to substitution reaction with benzylamine; (3) TC06A-Z04 was obtained by subjecting TC06A-Z03 to debenzylation reaction at an amine group, and TC06A-Z05 was obtained by further subjecting TC06A-Z04 to chloro-acetylation; (4) TC06A-Z06 was obtained by subjecting TC06A-Z05 to substitution with TC06A-Z02; (5) TC06A-Z07 with three secondary amino groups was obtained by subjecting TC06A-Z06 to de-tert-butylation reaction; (6) TC06A-Z08 was synthesized by subjecting TC06A-Z07 to amidation condensation with GC-0; (7) TC06A was obtained by subjecting TC06A-Z08 to debenzylation and then to amidation condensation with 3-hydroxypropionic acid.
TC08A-Z01 was obtained by subjecting CC-3B and GN-1 as starting materials to the same amidation condensation reaction steps for synthesis of TC07A-Z01.
MS (ESI): m/z [1/2M+H]+, theoretical 882.4, found 882.5.
TC08A-Z02 was obtained by subjecting TC08A-Z01 as a starting material to the same debenzylation reaction steps for synthesis of TC07A.
MS (ESI): m/z [1/2M+H]+, theoretical 837.3, found 837.3.
TC08A-Z03 was obtained by subjecting TC08A-Z02 and benzyl 6-aminocaproate as starting materials to similar amidation condensation reaction steps for synthesis of BL-1-Z01.
MS (ESI): m/z [1/2M+H]+, theoretical 938.9, found 939.1.
TC08A-Z03 could also be obtained by subjecting GL-1 and GN-3 as starting materials to the same urea condensation reaction steps for synthesis of BL-2-Z01.
MS (ESI): m/z [1/2M+H]+, theoretical 938.9, found 939.0.
TC08A was obtained by subjecting TC08A-Z03 as a starting material to the same debenzylation reaction steps for synthesis of TC07A.
MS (ESI): m/z [1/2M+Na]+, theoretical 915.9, found 916.0.
Under N2 atmosphere and at room temperature, CL-6 (1.1 g, 2 mmol), CN-1A (0.7 g, 2 mmol), EDCI (0.5 g, 2.4 mmol) and HOBt (0.3 g, 2.4 mmol) were successively added to a flask containing dichloromethane (22 mL), and under constant stirring, DIEA (0.52 g, 4 mmol) was slowly added, and the reaction was then carried out for 12 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (30 mL) for quenching and dilution, and extracted with dichloromethane (30 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (50 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain 1.6 g of a yellow liquid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 7/3) to obtain 0.5 g of a yellow oily liquid product with a yield of 31.8%.
MS (ESI): m/z [M+Na]+, theoretical 877.5, found 877.4.
BL-3-Z01 (0.5 g, 0.6 mmol) was dissolved in dichloromethane (11 mL) in a flask and stirred at room temperature until the reaction mixture became clear. The reaction was then slowly added with TFA (2 g, 18.5 mmol) and then carried out under stirring for 12 h when LCMS showed that the reaction was complete. The obtained mixture was subjected to distillation under reduced pressure to remove the solvent. The obtained crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 1/1 to pure ethyl acetate) to obtain 0.4 g of a yellow oily liquid product with a yield of 90%.
MS (ESI): m/z [M+H]−, theoretical 709.4, found 709.3.
Under N2 atmosphere, BL-3 (0.4 g, 0.6 mmol), GN-1 (0.8 g, 1.8 mmol), EDCI (0.4 g, 2.2 mmol) and HOBt (0.3 g, 2.2 mmol) were successively added to a flask containing dichloromethane (11 mL) and stirred at room temperature until the reaction mixture became clear, followed by slow addition of DIEA (0.5 g, 3.7 mmol). The reaction was then carried out for 12 h when LCMS showed that the reaction was completed. The reaction solution was added with pure water (20 mL) to quench the reaction and extracted with dichloromethane (20 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain 1.2 g of a white solid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 9/1) to obtain 0.9 g of a white solid product with a yield of 72.5%.
MS (ESI): m/z [1/2M+H]+, theoretical 979.5, found 979.8.
1H NMR (400 MHz, DMSO-d6) δ 8.00-7.90 (m, 2H), 7.85 (d, J=9.2 Hz, 3H), 7.79-7.69 (m, 2H), 7.41-7.30 (m, 5H), 5.21 (d, J=3.3 Hz, 3H), 5.07 (s, 2H), 4.97 (dd, J=11.4, 3.3 Hz, 3H), 4.54 (d, J=8.5 Hz, 3H), 4.47-4.27 (m, 1H), 4.19-4.09 (m, 1H), 4.07-3.99 (m, 9H), 3.92-3.83 (m, 6H), 3.81-3.74 (m, 3H), 3.65-3.53 (m, 10H), 3.53-3.44 (m, 7H), 3.43-3.37 (m, 9H), 3.31-3.13 (m, 9H), 2.36-2.29 (m, 6H), 2.27-2.16 (m, 2H), 2.10 (s, 9H), 1.99 (s, 9H), 1.89 (s, 9H), 1.77 (s, 9H), 1.57-1.37 (m, 4H), 1.23 (s, 12H).
TC09A-Z01 (98 mg, 0.05 mmol) was dissolved in tetrahydrofuran (3 mL) and added with Pd/C (10 mg, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid and then concentrated to obtain 90 mg of a white solid product with a yield of 97.5%.
MS (ESI): m/z [1/2M+H]+, theoretical 934.4, found 934.5.
Under N2 atmosphere, TC09A (90 mg, 0.048 mmol), Cy5-EtN (29 mg, 0.05 mmol), EDCI (14 mg, 0.073 mmol) and HOBt (10 mg, 0.074 mmol) were successively added to a flask containing dichloromethane (2 mL) and stirred at room temperature until the reaction mixture became clear, followed by addition of DIEA (13 mg, 0.1 mmol). The reaction was then carried out for 3 h when LCMS showed that the reaction was completed. The obtained reaction solution was subjected to distillation under reduced pressure to remove the solvent. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 97/3 to 91/9) to obtain 80 mg of a blue solid product with a yield of 67%.
MS (ESI): m/z [1/3 (M−Cl+2Na)]+, theoretical 811.7, found 811.6.
Under N2 atmosphere, TC09A-Cy5-01 (80 mg, 0.03 mmol) and methanol (2.5 mL) were added to a flask and stirred at room temperature until the reaction mixture became clear, followed by addition of 25% ammonia (0.5 mL). The reaction was then carried out under stirring at room temperature for 4 h when LCMS showed that the reaction was completed. The obtained reaction solution was subjected to distillation under reduced pressure to remove the solvent and purified by prep-HPLC (C18/5 μm, column temperature: 40° C.; water/acetonitrile, 95/5 to 5/95, containing 0.1% formic acid) to obtain 12.7 mg of a blue solid product with a yield of 16.6% and a purity of 99.9% (630 nm).
MS (ESI): m/z [1/2(M−Cl+Na)]+, theoretical 1017.1, found 1016.7.
TC23A was synthesized by the same synthesis steps for synthesis of TC09A, except that CN-1A was replaced with CN-3A.
TC12A and the fluorescent conjugate thereof were synthesized by the same steps for synthesis of TC09A and the fluorescent conjugate thereof, except that CN-1 was replaced with GN-2.
BL-3 (200 mg, 0.28 mmol) and GN-2 (607 mg, 1.27 mmol) were used as starting materials for synthesis to obtain 270 mg of a white solid product with a yield of 46%.
MS (ESI): m/z [1/2M+H]+, theoretical 1045.5, found 1045.2.
TC12A-Z01 (140 mg, 0.067 mmol) was used as a starting material for synthesis to obtain 130 mg of a white solid product with a yield of 97%.
MS (ESI): m/z [1/2M+H]+, theoretical 1000.5, found 1000.6.
1H NMR (400 MHz, DMSO-d6) δ 7.98-7.88 (m, 2H), 7.83 (d, J=9.2 Hz, 3H), 7.77-7.67 (m, 2H), 5.19 (d, J=3.3 Hz, 3H), 4.95 (dd, J=11.4, 3.3 Hz, 3H), 4.52 (d, J=8.5 Hz, 3H), 4.45-4.25 (m, 1H), 4.17-4.07 (m, 1H), 4.05-3.97 (m, 9H), 3.90-3.81 (m, 6H), 3.79-3.70 (m, 8H), 3.65-3.51 (m, 16H), 3.51-3.42 (m, 8H), 3.41-3.35 (m, 9H), 3.31-3.28 (m, 2H), 3.25-3.11 (m, 7H), 2.34-2.27 (m, 6H), 2.25-2.14 (m, 2H), 2.08 (s, 9H), 1.97 (s, 9H), 1.87 (s, 9H), 1.75 (s, 9H), 1.55-1.47 (m, 2H), 1.46-1.37 (m, 2H), 1.21 (s, 12H).
TC12A (70 mg, 0.035 mmol) was used as a starting material for synthesis to obtain 40 mg of a blue solid product with a yield of 45%.
MS (ESI): m/z [1/3 (M−Cl+2H)]+, theoretical 841.1, found 840.9.
TC12A-Cy5-01 (10 mg, 0.0039 mmol) was used as a starting material for synthesis and the crude product was purified by prep-HPLC to obtain 0.93 mg of a blue solid product with a yield of 10.9% and a purity of 97.1% (284 nm).
MS (ESI): m/z [1/2(M−Cl+H)]+, theoretical 1072.1, found 1071.7.
Under N2 atmosphere and at room temperature, CL-6 (670 mg, 1.2 mmol), CN-2A (442 mg, 1.2 mmol), EDCI (281 mg, 1.5 mmol) and HOBt (197 mg, 1.5 mmol) were successively added to a flask containing dichloromethane (15 mL), and under constant stirring, DIEA (314 mg, 2.4 mmol) was slowly added, and the reaction was carried out 12 h when LCMS showed that the reaction was completed. The reaction solution was added with pure water (30 mL) for quenching and dilution, and extracted with dichloromethane (30 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (40 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a yellow liquid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 7/3) to obtain 430 mg of a yellow oily liquid product with a yield of 40%.
MS (ESI): m/z [M+Na]+, theoretical 891.6, found 891.5.
BL-3M-Z01 (430 mg, 0.5 mmol) was dissolved in dichloromethane (10 mL) in a flask and stirred at room temperature until the reaction mixture became clear, followed by slow addition of trifluoroacetic acid (1.12 g, 10 mmol). The reaction was carried out under stirring for 12 h when LCMS showed that the reaction was completed. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the residue was dried under vacuum to obtain 370 mg of a yellow oily liquid product with a yield of 107% (the product contained some residual TFA and could be directly used in subsequent reaction without purification).
MS (ESI): m/z [M−H]−, theoretical 721.3, found 721.3.
Under N2 atmosphere and at room temperature, BL-3M (361 mg, 0.5 mmol), GN-2 (1.07 g, 2.24 mmol), EDCI (400 mg, 2.09 mmol) and HOBt (300 mg, 2.22 mmol) were successively added to a flask containing dichloromethane (10 mL) and stirred at room temperature until the reaction mixture became clear, followed by slow addition of DIEA (387 mg, 3 mmol). The reaction was carried out for 12 h when LCMS showed that the reaction was completed. The reaction solution was quenched with pure water (20 mL) and extracted with dichloromethane (20 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain 1.2 g of a white solid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 9/1) to obtain 310 mg of a white solid product with a yield of 29.5%.
MS (ESI): m/z [1/3M+H]+, theoretical 702.0, found 702.2.
TC11A-Z01 (310 mg, 0.147 mmol) was dissolved in tetrahydrofuran (6 mL) and added with Pd/C (30 mg, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when LCMS showed that the reaction was complete. The mixture was filtered to remove the solid and the filtrate was concentrated to obtain 274 mg of a white solid product with a yield of 93%.
MS (ESI): m/z [1/3M+H]+, theoretical 672.0, found 672.1.
Under N2 atmosphere, TC11A (50 mg, 0.025 mmol), Cy5-EtN (14 mg, 0.025 mmol), EDCI (7 mg, 0.037 mmol) and HOBt (5 mg, 0.037 mmol) were successively added to a flask containing dichloromethane (2 mL) and stirred at room temperature until the reaction mixture became clear, followed by addition of DIEA (6.5 mg, 0.05 mmol). The reaction was carried out for 3 h when LCMS showed that the reaction was completed. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the obtained crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 90/10 to 80/20) to obtain 25 mg of a blue solid product with a yield of 39%.
MS (ESI): m/z [1/3 (M−Cl+2H)]+, theoretical 845.8, found 845.5.
Under N2 atmosphere, TC11A-Cy5-01 (25 mg, 0.01 mmol) and methanol (5 mL) were added to a flask and stirred until the reaction mixture became clear, followed by addition of 25% ammonia (0.5 mL). The reaction was increased to 40° C., and then carried out under stirring for 1 h when LCMS showed that the reaction was completed. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the residue was purified by prep-HPLC (C18/5 μm, column temperature: 40° C.; water/acetonitrile, 95/5 to 5/95, containing 0.1% formic acid) to obtain 8.9 mg of a blue solid product with a yield of 42% and a purity of 98.7% (285 nm).
MS (ESI): m/z [1/3 (M−Cl+2H)]+, theoretical 719.7, found 719.8.
TC10A and the fluorescent conjugate thereof were synthesized by the same steps for synthesis of TC11A and the fluorescent conjugate thereof, except that GN-2 was replaced with GN-1.
BL-3M (220 mg, 0.3 mmol) and GN-1 (400 mg, 0.9 mmol) were used as starting materials for synthesis to obtain 260 mg of a white solid product with a yield of 44%.
MS (ESI): m/z [1/2M+H]+, theoretical 986.5, found 986.1.
TC10A-Z01 (260 mg, 0.13 mmol) was used as a starting material for synthesis to obtain 220 mg of a white solid product with a yield of 88.7%.
MS (ESI): m/z [1/2M+H]+, theoretical 941.4, found 941.1.
1H NMR (400 MHz, DMSO-d6), δ 7.96 (br s, 2H), 7.83 (d, J=8.9 Hz, 3H), 7.77-7.67 (m, 2H), 5.20 (d, J=3.3 Hz, 3H), 4.96 (d, J=12.0 Hz, 3H), 4.52 (d, J=8.5 Hz, 3H), 4.45-4.24 (m, 1H), 4.05-3.97 (m, 9H), 3.91-3.81 (m, 6H), 3.80-3.72 (m, 3H), 3.64-3.51 (m, 10H), 3.50-3.43 (m, 8H), 3.42-3.36 (m, 9H), 3.30-3.21 (m, 4H), 3.20-3.11 (m, 6H), 2.35-2.27 (m, 6H), 2.25-2.14 (m, 2H), 2.08 (s, 9H), 1.98 (s, 9H), 1.87 (s, 9H), 1.76 (s, 9H), 1.55-1.47 (m, 2H), 147-1.37 (m, 2H), 1.21 (s, 12H), 1.19 (s, 3H).
TC10A (100 mg, 0.05 mmol) was used as a starting material for synthesis to obtain 50 mg of a blue solid product with a yield of 41%.
MS (ESI): m/z [1/2(M−Cl+H)]+, theoretical 1202.1, found 1201.8.
TC10A-Cy5-01 (11 mg, 0.0045 mmol) was used as a starting material for synthesis and the crude product was purified by prep-HPLC to obtain 3.17 mg of a blue solid product with a yield of 35% and a purity of 98.8% (284 nm).
MS (ESI): m/z [1/2(M−Cl+H)]+, theoretical 1013.1, found 1013.0.
L-4-Z01 was obtained by subjecting CC-13A and benzyl 3-aminopropionate as starting materials to similar amidation condensation steps for synthesis of BL-1-Z01.
MS (ESI): m/z [M+H]+, theoretical 793.4, found 793.7.
BL-4 was obtained by subjecting BL-4-Z01 as a starting material to the same de-tert-butylation reaction steps for synthesis of BL-1.
MS (ESI): m/z [M−H]−, theoretical 623.3, found 623.4.
TC13A-Z01 was obtained by subjecting BL-4 and GN-1 as starting materials to the same amidation condensation reaction steps for synthesis of TC01A-Z01.
MS (ESI): m/z [1/2M+H]+, theoretical 937.4, found 937.5.
TC13A was obtained by subjecting TC13A-Z01 as a starting material to the same debenzylation reaction steps for synthesis of TC01A.
MS (ESI): m/z [1/2M+H]+, theoretical 892.4, found 892.4.
Under N2 atmosphere, GC-0 (1.3 g, 2.81 mmol), EDCI (570 mg, 2.98 mmol), triethylamine (517 mg, 5.1 mmol) and HOBt (115 mg, 0.852 mmol) were successively added to a flask containing dichloromethane (16 mL), and under stirring, NC-3 (433 mg, 0.852 mmol) was added, and the reaction was carried out at room temperature for 16 h when LCMS showed that the reaction was completed. The reaction solution was added with pure water (25 mL) and extracted with dichloromethane (15 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, and filtered. The reaction solution was subjected to distillation under reduced pressure, and the obtained crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 15/1) to obtain 1.21 g of a white solid product with a yield of 77%.
MS (ESI): m/z [1/2M+H]+, theoretical 922.9, found 923.1.
TC14A-Z02 was obtained by subjecting TC14A-Z01 as a starting material to the same debenzylation reaction steps for synthesis of TC08A-Z02.
MS (ESI): m/z [1/2M+H]+, theoretical 877.9, found 877.9.
TC14A-Z03 was obtained by subjecting TC14A-Z02 and benzyl 3-aminopropionate as starting materials to similar amidation condensation steps for synthesis of BL-4-Z01.
MS (ESI): m/z [M+H]+, theoretical 958.4, found 958.4.
TC14A was obtained by subjecting TC14A-Z03 as a starting material to the same debenzylation reaction steps for synthesis of TC13A.
MS (ESI): m/z [1/2M+H]+, theoretical 913.4, found 913.5.
BL-11-Z01 was obtained by subjecting CC-14 and benzyl 6-aminocaproate as starting materials to similar amidation condensation steps for synthesis of BL-1-Z01.
MS (ESI): m/z [M+H]+, theoretical 779.5, found 779.6.
BL-11 was obtained by subjecting BL-11-Z01 as a starting material to the same de-tert-butylation reaction steps for synthesis of BL-1.
MS (ESI): m/z [M−H]−, theoretical 609.3, found 609.2.
TC15A-Z01 was obtained by subjecting BL-11 and GN-1 as starting materials to the same amidation condensation reaction steps for synthesis of TC01A-Z01.
MS (ESI): m/z [1/2M+H]+, theoretical 930.4, found 930.6.
TC15A was obtained by subjecting TC15A-Z01 as a starting material to the same debenzylation reaction steps for synthesis of TC01A.
MS (ESI): m/z [1/2M+H]+, theoretical 885.4, found 885.5.
TC16A was synthesized by the same steps for synthesis of TC15A, except that CC-14 was replaced with CC-6A as a starting material.
TC25A was synthesized by the same steps for synthesis of TC15A, except that CC-14 was replaced with CC-12 as a starting material.
Under N2 atmosphere, dichloromethane (20 mL), CN-14 (164 mg, 0.44 mmol), GN-1 (868 mg, 2.0 mmol), EDCI (506 mg, 2.64 mmol), triethylamine (266 mg, 2.64 mmol) and DMAP (53 mg, 0.44 mmol) were successively added to a flask and the reaction was carried out under stirring at room temperature for 16 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (100 mL) and extracted with dichloromethane (50 mL×3). The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent. The obtained crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 30/1 to 10/1) to obtain 446 mg of a white solid product with a yield of 63%.
MS (ESI): m/z [1/2M+H]+, theoretical 812.3, found 812.3.
TC17A-Z01 (300 mg, 0.185 mmol), Pd/C (30 mg, 10 wt %), methanol (1 mL) and tetrahydrofuran (10 mL) were successively added to a flask. The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when TLC showed that the conversion of the raw materials was complete. The reaction mixture was filtered to remove the solid and the filtrate was concentrated under reduced pressure. The obtained crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 9/1) to obtain 270 mg of a yellow solid product with a yield of 92%.
MS (ESI): m/z [1/2M+H]+, theoretical 797.3, found 797.5.
Under N2 atmosphere, dichloromethane (3 mL), TC17A-Z02 (85 mg, 0.0534 mmol), succinic anhydride (16 mg, 0.16 mmol) and triethylamine (22 mg, 0.22 mmol) were successively added to a flask and the reaction was carried out under stirring at room temperature for 5 h when TLC showed that the conversion of the raw materials was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the obtained crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 5/1) to obtain 50 mg of a white solid product with a yield of 56%.
MS (ESI): m/z [1/2(M+H+Na)]+, theoretical 858.3, found 858.5.
Under N2 atmosphere, dichloromethane (10 mL), TC17A (20 mg, 0.0118 mmol), Cy5-EtN (6.8 mg, 0.0118 mmol), EDCI (3.4 mg, 0.0177 mmol), HOBt (1.6 mg, 0.0118 mmol) and DIEA (3.1 mg, 0.0236 mmol) were successively added to a flask. The reaction was carried out under stirring at room temperature and in the dark for 24 h when LCMS showed that the reaction was completed. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the crude product was purified by prep-TLC (dichloromethane/methanol, 5/1) to obtain 9 mg of a blue solid product with a yield of 34%.
MS (ESI): m/z [1/3 (M−Cl+2H)]+, theoretical 739.0, found 738.8.
TC17A-Cy5-01 (9 mg, 0.0041 mmol) and methanol (4.5 mL) were added to a flask and stirred until the reaction mixture became clear. The reaction mixture was added with 25% ammonia (0.5 mL) and stirred at room temperature for 6.5 h when LCMS showed that the reaction was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, thereby obtaining 6.5 mg of a blue solid crude product. The crude product was purified by prep-HPLC (C18/5 μm, column temperature: 40° C.; water/acetonitrile, 95/5 to 5/95, containing 0.1% formic acid) to obtain 1.1 mg of a blue solid product with a yield of 14.7% and a purity of 99.6% (630 nm).
MS (ESI): m/z [1/2(M−Cl+Na)]+, theoretical 929.4, found 929.8.
Dichloromethane (7 mL), TC04A-Z02 (70 mg, 0.04 mmol), succinic anhydride (20 mg, 0.2 mmol) and triethylamine (20 mg, 0.2 mmol) were successively added to a flask and the reaction was carried out under stirring at 35° C. for 6 h when TLC showed that the conversion of the raw materials was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the obtained crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 10/1) to obtain 55 mg of a white solid product with a yield of 75%.
MS (ESI): m/z [1/2M+H]+, theoretical 913.4, found 913.4.
Under N2 atmosphere, dichloromethane (10 mL), TC18A (55 mg, 0.03 mmol), Cy5-EtN (34.5 mg, 0.06 mmol), EDCI (11.5 mg, 0.06 mmol), HOBt (8.1 mg, 0.06 mmol) and DIEA (7.7 mg, 0.06 mmol) were successively added to a flask. The reaction was carried out under stirring at room temperature and in the dark for 27 h when LCMS showed that the reaction was completed. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the crude product was purified by prep-TLC twice (dichloromethane/methanol, 5/1) to obtain 32 mg of a blue solid product with a yield of 45%.
MS (ESI): m/z [1/2(M−Cl+H)]+, theoretical 1174.0, found 1173.7.
TC18A-Cy5-01 (32 mg, 0.013 mmol) and methanol (10 mL) were added to a flask and stirred until the reaction mixture became clear, followed by addition of 25% ammonia (1 mL). The reaction was carried out under stirring at room temperature for 6 h when LCMS showed that the reaction was completed. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, thereby obtaining 29 mg of a blue solid crude product. The crude product was purified by prep-HPLC (C18/5 μm, column temperature: 40° C.; water/acetonitrile, 95/5 to 5/95, containing 0.1% formic acid) to obtain 4.8 mg of a blue solid product with a yield of 17.8% and a purity of 99.9% (630 nm).
MS (ESI): m/z [1/2(M−Cl+Na)]+, theoretical 996.0, found 995.8.
TC19A-Z01 was obtained by subjecting CN-9B and GN-1 as starting materials to the same amidation condensation reaction steps for synthesis of TC02A-Z01.
MS (ESI): m/z [1/2M+H]+, theoretical 875.4, found 875.5.
TC19A-Z02 was obtained by subjecting TC19A-Z01 as a starting material to the same de-benzyloxycarbonylation reaction steps for synthesis of TC02A-Z02.
MS (ESI): m/z [1/2M+H]+, theoretical 808.3, found 808.3.
Under N2 atmosphere, TC19A-Z02 (0.78 g, 0.483 mmol), monobenzyl dodecyldiate (0.155 g, 0.483 mmol), EDCI (0.12 g, 0.63 mmol) and HOBt (0.065 g, 0.48 mmol) were successively added to a flask containing dichloromethane (12 mL), and then under constant stirring, triethylamine (0.098 g, 0.97 mmol) was added, and the reaction was carried out at room temperature for 4 h when LCMS showed that the reaction was complete. The reaction solution was diluted with dichloromethane (20 mL), washed with 26% aqueous sodium chloride solution (15 mL×2), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 15/1) to obtain 0.74 g of a light yellow solid, which was a condensed intermediate. The solid was dissolved with tetrahydrofuran (6 mL) and added with Pd/C (70 mg, wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when TLC showed that the conversion of the raw materials was complete. The reaction mixture was filtered to remove the solid, and the filtrate was concentrated under reduced pressure and dried under vacuum to obtain 0.53 g of a white solid product with a yield of 60%.
MS (ESI): m/z [1/2M+H]+, theoretical 914.4, found 914.4.
TC20A was synthesized by the same steps for synthesis of TC19A, except that CN-9B was replaced with CN-15 as a starting material.
TC24A was synthesized by the same steps for synthesis of TC19A, except that CN-9B was replaced with CN-13, and monobenzyl dodecanediate was replaced with monobenzyl adipate.
TC26A was synthesized by the same steps for synthesis of TC19A, except that CN-9B was replaced with CN-11, and monobenzyl dodecanediate with monobenzyl adipate.
NL-1-Z01 was obtained by subjecting N-α-Cbz-Nε-Boc-D-lysine and benzyl 6-aminocaproate as starting materials to similar amidation condensation reaction steps for synthesis of CL-1X.
MS (ESI): m/z [M+H]+, theoretical 584.3, found 584.4.
NL-1 was obtained by subjecting NL-1-Z01 as a starting material to similar de-benzyloxycarbonylation reaction steps for synthesis of TC19A-Z02.
MS (ESI): m/z [M+H]+, theoretical 450.3, found 450.2.
BL-5-Z01 was obtained by subjecting NN-0 and NL-1 as starting materials to similar urea condensation reaction steps for synthesis of CC-3X.
MS (ESI): m/z [M+H]+, theoretical 867.5, found 867.4.
BL-5 was obtained by subjecting BL-5-Z01 as a starting material to the same de-tert-butoxycarbonylation reaction steps for synthesis of NC-4.
MS (ESI): m/z [M+H]+, theoretical 567.4, found 567.5.
Under N2 atmosphere, GN-1 (1.3 g, 2.99 mmol) and triethylamine (0.36 g, 3.59 mmol) were added to a flask containing dichloromethane (18 mL), and under stirring, N,N′-carbonyldiimidazole (0.49 g, 3.05 mmol) was slowly added, and the reaction was carried out for 1 h. The reaction was then added with BL-5 (a HCl salt, 0.67 g, 0.997 mmol) in batches, and then carried out under stirring at room temperature for 16 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (25 mL) and extracted with dichloromethane (15 mL×3). The obtained organic phases were combined, washed with 26% saturated saline solution (20 mL), dried over anhydrous sodium sulfate, filtered and concentrated. The obtained crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 15/1) to obtain 1.01 g of a light yellow solid product with a yield of 52%.
MS (ESI): m/z [1/2M+H]+, theoretical 974.4, found 974.5.
TC21A was obtained by subjecting TC21A-Z01 as a starting material to the same debenzylation reaction steps for synthesis of TC03A.
MS (ESI): m/z [1/2M+H]+, theoretical 929.4, found 929.4.
TC22A-Z01 was obtained by subjecting NN-2 and GN-1 as starting materials to the same urea condensation reaction steps for synthesis of TC21A-Z01.
MS (ESI): m/z [1/2M+H]+, theoretical 918.9, found 918.8.
TC22A-Z02 was obtained by subjecting TC22A-Z01 as a starting material to the same de-benzyloxycarbonylation reaction steps for synthesis of TC19A-Z02.
MS (ESI): m/z [1/2M+H]+, theoretical 851.9, found 852.0.
TC22A was obtained by subjecting TC22A-Z02 and monobenzyl dodecanediate as starting materials to the same steps of amidation condensation and debenzylation reaction for synthesis of TC19A.
MS (ESI): m/z [1/2M+H]+, theoretical 957.9, found 957.8.
1H NMR (400 MHz, DMSO-d6) δ 8.08 (d, J=7.6 Hz, 1H), 7.95-7.85 (m, 3H), 7.82 (d, J=8.4 Hz, 3H), 6.04-5.88 (m, 6H), 5.19 (d, J=3.3 Hz, 3H), 4.95 (dd, J=11.2, 3.4 Hz, 3H), 4.57-4.46 (s, 4H), 4.04-3.98 (m, 10H), 3.94-3.81 (m, 6H), 3.80-3.72 (m, 2H), 3.62-3.59 (m, 4H), 3.58-3.51 (m, 16H), 3.50-3.43 (m, 2H), 3.42-3.39 (m, 2H), 3.38-3.34 (m, 4H), 3.34-3.26 (m, 4H), 3.26-3.10 (m, 6H), 2.26-2.21 (m, 6H), 2.15-2.10 (m, 2H), 2.08 (s, 9H), 1.97 (s, 10H), 1.87 (s, 9H), 1.75 (s, 9H), 1.48-1.35 (m, 4H), 1.24-1.18 (m, 12H).
Methyl 3-bromopropionate (2.76 g, 16.5 mmol) and triethylamine (1.67 g, 16.5 mmol) were successively added to a flask containing tetrahydrofuran (10 mL), and under constant stirring and at 45° C., benzylamine (0.8 g, 7.5 mmol) was slowly dropwise added within 1 h, and the reaction was carried out for 16 h when LCMS showed that the reaction was completed. The reaction solution was diluted with pure water (20 mL) and extracted with ethyl acetate (10 mL×3). The obtained organic phases were combined, washed with 26% saturated saline solution (20 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 3/2, containing 0.5% triethylamine) to obtain 1.5 g of a gray-yellow oily liquid product with a yield of 71%.
MS (ESI): m/z [M+H]+, theoretical 280.2, found 280.5.
CN-16-Z01 (1.5 g, 5.4 mmol) was added to a flask containing tetrahydrofuran (6 mL) and stirred until the reaction mixture became clear, followed by addition of 4 N aqueous sodium hydroxide solution (6 mL). The reaction was carried out under stirring at 45° C. for 2 h when LCMS showed that the reaction was completed. The reaction solution was diluted with pure water (15 mL), adjusted to about pH3 with 1 N hydrochloric acid, and extracted with ethyl acetate (10 mL×4) to remove the aqueous phase. The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain 1.15 g of a light yellow solid product with a yield of 85%.
MS (ESI): m/z [M−H]−, theoretical 250.1, found 249.7.
Benzylamine (1.1 g, 10.2 mmol), N-Boc-3-aminopropyl bromide (5 g, 21.0 mmol), potassium carbonate (2.9 g, 21.0 mmol) and sodium iodide (0.77 g, 5.1 mmol) were successively added to a flask containing acetonitrile (20 mL). Then the reaction was gradually increased to 70° C., and then carried out under stirring for 12 h when LCMS showed that the reaction was substantially completed. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the residue was added with pure water (30 mL), mixed well, and extracted with ethyl acetate (15 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 3/2, containing 0.5% triethylamine) to obtain 3.3 g of a brown-yellow viscous liquid product with a yield of 77%.
MS (ESI): m/z [M+H]+, theoretical 422.3, found 422.3.
NC-6-Z01 (5.9 g, 14.0 mmol) was added to a flask containing dichloromethane (5 mL), followed by slow dropwise addition of trifluoroacetic acid (5 mL) under stirring at room temperature. The reaction was carried out under stirring for 2 h when LCMS showed that the reaction was completed. The reaction solution was subjected to distillation under reduced pressure to remove the solvent and dried under vacuum to obtain 6.2 g of a brown-yellow oily product (a TFA salt) with a yield of 98%.
MS (ESI): m/z [M+H]+, theoretical 222.2, found 222.1.
Under N2 atmosphere, under stirring and at room temperature, NC-6 (4.85 g, 10.8 mmol), trans-1,4-cyclohexanedicarboxylic acid monomethyl ester (4.2 g, 22.8 mmol), EDCI (5.4 g, 28.1 mmol) and HOBt (3.1 g, 22.8 mmol) were successively added to a flask containing dichloromethane (25 mL), and added slowly with DIEA (4.9 g, 37.8 mmol), and the reaction was carried out for 6 h when LCMS showed that the reaction was completed. The reaction solution was added with pure water (40 mL) and extracted with dichloromethane (300 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (30 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a white solid crude product. The crude product was crystallized and purified with methyl tert-butyl ether to obtain 5.0 g of a white solid product with a yield of 83%.
MS (ESI): m/z [M+Na]+, theoretical 558.4, found 558.5.
CN-17-Z01 (3.5 g, 6.3 mmol) was added to a flask containing methanol (5 mL) and stirred until the reaction mixture became clear, followed by addition of 3 N aqueous lithium hydroxide solution (6 mL). The reaction was carried out under stirring at 45° C. for 2 h when LCMS showed that the reaction was completed. The reaction solution was diluted with pure water (12 mL), adjusted to about pH2 with 1 N hydrochloric acid, and extracted with ethyl acetate (8 mL×4) to remove the aqueous phase. The obtained organic phases were combined, dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The crude product was crystallized with ethyl acetate to obtain 2.6 g of a light yellow solid product with a yield of 79%.
MS (ESI): m/z [M−H]−, theoretical 528.3, found 528.4.
Under N2 atmosphere, GN-1 (2.1 g, 4.76 mmol), CN-17 (1.2 g, 2.27 mmol), EDCI (0.91 g, 4.76 mmol) and HOBt (0.43 g, 3.2 mmol) were successively added to a flask containing dichloromethane (25 mL) and stirred at room temperature until the reaction mixture became clear. DIEA (0.82 g, 6.3 mmol) was added, and the reaction was carried out under stirring for 6 h when LCMS showed that the reaction was completed. The reaction solution was added with pure water (20 mL) and extracted with dichloromethane (10 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 40/1) to obtain 2.0 g of a white solid, which was a condensed intermediate. The obtained solid was dissolved in tetrahydrofuran (12 mL), followed by successive addition of trifluoroacetic acid (0.17 g, 1.5 mmol) and Pd/C (0.4 g, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid, and the filtrate was concentrated under pressure and dried under vacuum to obtain 1.89 g of a white solid product with a yield of 65.4%.
MS (ESI): m/z [M+H]+, theoretical 1272.6, found 1272.9.
Boc-β-alanine (9.99 g, 52.8 mmol) and potassium carbonate (7.7 g, 55.5 mmol) were added to N,N-dimethylformamide (100 mL), followed by slow dropwise addition of benzyl bromide (9.5 g, 55.5 mmol) under stirring at room temperature in 20 min. The reaction was carried out under stirring for 20 h when TLC showed disappearance of raw materials (petroleum ether/ethyl acetate, 4/1, Rf of the product: 0.3). The reaction solution was added with pure water (300 mL) and extracted with ethyl acetate (200 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (300 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a colorless liquid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 10/1 to 4/1) to obtain 12.6 g of a colorless transparent liquid with a yield of 85%.
MS (ESI): m/z [M+Na]+, theoretical 302.2, found 302.2.
BL-6-Z01 (12.6 g, 45.1 mmol) was added to dichloromethane (125 mL) and stirred at room temperature until the reaction mixture became clear, followed by slow dropwise addition of trifluoroacetic acid (25.7 g, 225 mmol). The reaction was carried out under stirring for 2 h when LCMS showed that the reaction was completed. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, thereby obtaining a colorless oily crude product. The crude product was purified by silica gel column chromatography (petroleum ether/ethyl acetate, 1/1 to pure ethyl acetate) to obtain 6.8 g of a white solid (a TFA salt) with a yield of 51%.
MS (ESI): m/z [M−H]−, theoretical 178.1, found 178.1.
1,4-Dioxane (100 mL) and 3-amino-L-alanine hydrochloride (10 g, 71.1 mmol) were added to a flask and stirred until the reaction mixture became clear, then added with NaHCO3 (29.5 g, 355 mmol) and pure water (100 mL), and finally added with Boc2O (17.8 g, 85.3 mmol) in batches. The reaction was carried out under stirring for 20 h when LCMS showed that the reaction was completed. The reaction solution was added with pure water (100 mL), adjusted to about pH4 with 20% aqueous KHSO4 solution, and extracted with dichloromethane (200 mL×3) to remove the aqueous phase. The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (100 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain 12.6 g of a colorless liquid with a yield of 58.3%.
MS (ESI): m/z [M+Na]+, theoretical 327.2, found 327.2.
Under N2 atmosphere, BL-6-Z03 (4.0 g, 13.2 mmol), BL-6-Z02 (TFA salt, 3.87 g, 13.2 mmol), EDCI (2.8 g, 14.5 mmol), HOBt (2.0 g, 14.5 mmol) and DIEA (3.4 g, 26.4 mmol) were successively added to a flask containing dichloromethane (40 mL) and stirred at room temperature for 5 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (50 mL) and extracted with dichloromethane (20 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (50 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a white solid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 10/1) to obtain 3.1 g of a white solid with a yield of 51%.
MS (ESI): m/z [M+Na]+, theoretical 488.3, found 488.3.
BL-6-Z04 (1.02 g, 2.2 mmol) was dissolved in 2 M HCl/ethyl acetate solution (15 mL) and the reaction was carried out under stirring at room temperature for 2 h when LCMS showed that the reaction was complete. The solid was collected by filtration and dried under vacuum to obtain 0.5 g of a white solid (a HCl salt) with a yield of 67.4%.
MS (ESI): m/z [M+H]+, theoretical 266.1, found 266.1.
BL-7-Z01 (CAS 18934-81-1, 20 g, 63.5 mmol) and potassium carbonate (9.2 g, 66.6 mmol) were added to a flask containing N,N-dimethylformamide (120 mL), and under stirring and at room temperature, benzyl bromide (11.2 g, 66.6 mmol) was slowly dropwise added within 20 min, and then the reaction was carried out for 20 h when TLC showed that the conversion of the raw materials was complete (petroleum ether/ethyl acetate, 4/1, Rf of the product: 0.3). The reaction solution was added with pure water (150 mL) and extracted with ethyl acetate (50 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (80 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a colorless liquid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 10/1 to 7/1) to obtain 23 g of a white solid product with a yield of 89%.
MS (ESI): m/z [M+H]+, theoretical 406.3, found 406.3.
BL-7-Z02 (23 g, 56.8 mmol) was added to a flask containing dichloromethane (100 mL) and stirred at room temperature until the reaction mixture became clear, followed by slow dropwise addition of trifluoroacetic acid (32.3 g, 284 mmol). Then the reaction was carried out for 2 h when LCMS showed that the reaction was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, thereby obtaining a light yellow oily crude product. The crude product was crystallized (ethyl acetate/petroleum ether, 1/10) to obtain 22.4 g of a white solid product (a TFA salt) with a yield of 94%.
MS (ESI): m/z [M+H]+, theoretical 306.2, found 306.2.
Under N2 atmosphere, BL-6-Z03 (2.0 g, 6.6 mmol), BL-7-Z03 (a TFA salt, 2.77 g, 6.6 mmol), EDCI (1.38 g, 7.2 mmol), HOBt (973 mg, 7.2 mmol) and DIEA (1.7 g, 13.2 mmol) were successively added to a flask containing dichloromethane (20 mL) and the reaction was carried out under stirring at room temperature for 3 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (50 mL) and extracted with dichloromethane (15 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (40 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a white solid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 10/1) to obtain 2.1 g of a white solid, which was recrystallized (dichloromethane/petroleum ether, 1/10) to obtain 2.46 g of a white solid product with a yield of 63%.
MS (ESI): m/z [M+H]+, theoretical 592.4, found 592.4.
BL-7-Z04 (2.4 g, 4.06 mmol) was dissolved in 2 M HCl/ethyl acetate solution (30 mL) and the reaction was carried out under stirring at room temperature for 2 h when LCMS showed that the reaction was complete. The solid was collected by filtration and dried under vacuum to obtain 1.58 g of a white solid (a HCl salt) with a yield of 84%.
MS (ESI): m/z [M+H]+, theoretical 392.3, found 392.3.
1H NMR (400 MHz, DMSO-d6) δ 8.90 (t, J=5.4 Hz, 1H), 8.70 (br s, 6H), 7.40-7.28 (m, 5H), 5.07 (s, 2H), 4.23 (t, J=5.6 Hz, 1H), 3.25 (d, J=5.6 Hz, 2H), 3.20-2.99 (m, 2H), 2.33 (t, J=7.3 Hz, 2H), 1.56-1.40 (m, 4H), 1.34-1.18 (m, 14H).
BL-6-Z03 (2.0 g, 6.57 mmol) and N-methylmorpholine (1.3 g, 13.1 mmol) were successively added to a flask containing tetrahydrofuran (12 mL), followed by slow dropwise addition of isobutyl chloroformate (0.9 g, 6.57 mmol) under N2 atmosphere and in an ice water bath of 0-5° C. The reaction was carried out under stirring for 1 h with the temperature maintained unchanged, followed by addition of glycylglycine (CAS 556-50-3, 2.0 g, 6.57 mmol) in batches. The reaction was allowed to naturally increase to the room temperature and then carried out for 4 h when LCMS showed that the reaction was completed. The reaction solution was adjusted to about pH7 with 0.5 N hydrochloric acid and extracted with ethyl acetate (15 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (25 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain 2.8 g of a light yellow solid product, which could be used directly in subsequent reaction without purification.
MS (ESI): m/z [M+H]+, theoretical 419.2, found 419.2.
BL-8-Z01 (2.1 g, 5.0 mmol) and potassium carbonate (0.9 g, 6.52 mmol) were successively added to a flask containing acetonitrile (14 mL) and stirred at room temperature for 0.5 h. The reaction was then dropwise added with benzyl bromide (1.03 g, 6.0 mmol) within 15 min and the reaction was carried out under stirring for 16 h when TLC showed that the conversion of the raw materials was complete (adjusted to about pH7, petroleum ether/ethyl acetate, 2/1, Rf of the product: 0.5). The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the residue was added with pure water (20 mL), mixed well, and extracted with ethyl acetate (15 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (25 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a light yellow solid product. The product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 2/1) to obtain 2.2 g of a light yellow solid, which was a carboxybenzyl ester intermediate. The obtained solid was dissolved in 2 M HCl/ethyl acetate solution (9 mL) and the reaction was carried out under stirring for 2 h when LCMS showed that the reaction was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the crude product was crystallized and purified with methyl tert-butyl ether to obtain 1.43 g of a light yellow solid product (a HCl salt) with a yield of 75%.
MS (ESI): m/z [M+H]+, theoretical 309.2, found 309.1.
Oxalyl chloride (0.58 g, 4.53 mmol) was added to a flask containing dichloromethane (4 mL), and under stirring, under N2 atmosphere and in an ice bath of 0-5° C., the reaction was dropwise added with CN-1A (1.5 g, 4.32 mmol) and triethylamine (0.44 g, 4.32 mL) homogenously dissolved in dichloromethane (8 mL) within 0.5 h, allowed to naturally increase to room temperature and then carried out under stirring for 1 h. The reaction was then slowly added with BL-8 (a HCl salt, 0.82 g, 2.16 mmol) and triethylamine (0.44 g, 4.32 mL) dissolved in dichloromethane (6 mL) and was carried out under stirring for 1 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (20 mL) and extracted with dichloromethane (10 mL×2). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (25 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 1/1) to obtain 1.49 g of a light yellow solid product with a yield of 62%.
MS (ESI): m/z [M+Na]+, theoretical 1133.6, found 1133.4.
BL-9-Z01 (1.49 g, 1.34 mmol) was added to a flask containing dichloromethane (8 mL) and stirred at room temperature until the reaction mixture became clear. The reaction was then slowly added with trifluoroacetic acid (8 mL) and carried out under stirring for 2 h when LCMS showed that the reaction was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the residue was dissolved with acetonitrile/water (15 mL, 1/4) and freeze-dried to obtain 1.34 g of a light yellow oily liquid product with a yield of 113% (some residual TFA remained).
MS (ESI): m/z [M−H]−, theoretical 885.3, found 885.1.
Synthesis of GN-8: (1) GN-8-Z01 was obtained by subjecting GN-1 to reaction with chloroacetyl chloride; (2) GN-8-Z02 was obtained by subjecting N-Boc-piperidine-4-formic acid (CAS: 84358-13-4) to amidation condensation reaction with piperazine; (3) GN-8-Z03 was obtained by subjecting GN-8-Z02 to reaction with chloroacetyl chloride, and GN-8-Z04 was obtained by subjecting GN-8-Z03 to substitution reaction with benzylamine; (4) GN-8-Z05 was obtained by subjecting GN-8-Z04 to substitution reaction with GN-8-Z01 and then subjecting the resultant product to de-tert-butoxycarbonylation reaction; (5) GN-8-Z06 was obtained by subjecting GN-8-Z05 to urea condensation reaction with GN-1; (6) GN-8 was obtained by subjecting GN-8-Z06 to debenzylation reaction.
Under N2 atmosphere, GN-7 (1.85 g, 1.45 mmol), CN-16 (0.17 g, 0.69 mmol), EDCI (0.32 g, 1.66 mmol) and HOBt (0.19 g, 1.38 mmol) were successively added to a flask containing dichloromethane (10 mL) and stirred at room temperature until the reaction mixture became clear. The reaction was then added with DIEA (0.36 g, 2.76 mmol) and carried out under stirring for 6 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (15 mL) and extracted with dichloromethane (10 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (15 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a solid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 19/1) to obtain 1.35 g of a white solid with a yield of 71%.
MS (ESI): m/z [1/2M+H]+, theoretical 1380.7, found 1380.6.
TEC01A-Z01 (0.7 g, 0.25 mmol) was dissolved in tetrahydrofuran (6 mL), and successively added with trifluoroacetic acid (0.029 g, 0.25 mmol) and Pd/C (0.07 g, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 1.5 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid, concentrated under reduced pressure and dried under vacuum to obtain 0.6 g of a light yellow solid product with a yield of 90.5%.
MS (ESI): m/z [1/2M+Na]+, theoretical 1357.6, found 1357.4.
Under N2 atmosphere, TEC01A-Z02 (0.5 g, 0.187 mmol), N-Boc-6-aminocaproic acid (CAS 6404-29-1, 0.046 g, 0.2 mmol), EDCI (0.046 g, 0.24 mmol), HOBt (0.025 g, 0.187 mmol) and DIEA (0.048 g, 0.37 mmol) were successively added to a flask containing dichloromethane (6 mL) and the reaction was carried out under stirring at room temperature for 3 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (18 mL) and extracted with dichloromethane (12 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a solid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 20/1) to obtain 0.43 g of a white solid, which was a condensed intermediate. The obtained solid was dissolved in ethyl acetate (2 mL), slowly added with 2 M HCl/ethyl acetate solution (1 mL) under stirring, and then the reaction was carried out under stirring for 1 h when LCMS showed that the reaction was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the crude product was crystallized and purified with methyl tert-butyl ether to obtain 0.43 g of a light yellow solid product with a yield of 81%, which is a HCl salt.
MS (ESI): m/z [M+H]+, theoretical 1392.2, found 1392.4.
GC-3 (1.2 g, 1.1 mmol) and N-methylmorpholine (0.22 g, 2.2 mmol) were successively added to a flask containing tetrahydrofuran (8 mL), followed by slow dropwise addition of isobutyl chloroformate (0.157 g, 1.15 mmol) under N2 atmosphere and in an ice bath of 0-5° C. The reaction was carried out under stirring for 1 h with the temperature maintained unchanged, followed by gradual addition of 3-amino-L-alanine hydrochloride (0.077 g, 0.55 mmol). The reaction was allowed to naturally increase to room temperature, and then carried out for 2 h when LCMS showed that the reaction was complete. The reaction solution was diluted with pure water (20 mL), adjusted to about pH4 with 20% aqueous KHSO4 solution, and extracted with ethyl acetate (11 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (20 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain 1.07 g of a light yellow solid product with a yield of 87%.
MS (ESI): m/z [1/2M+H]+, theoretical 1118.0, found 1117.9.
Under N2 atmosphere, GC-3 (1.8 g, 1.6 mmol), BL-6 (a HCl salt, 0.27 g, 0.8 mmol), EDCI (0.5 g, 2.4 mmol) and HOBt (0.2 g, 1.6 mmol) were successively added to a flask containing dichloromethane (20 mL) and stirred at room temperature until the reaction mixture became clear. The reaction was then added with DIEA (0.4 g, 3.2 mmol) and carried out under stirring for 6 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (20 mL) and extracted with dichloromethane (10 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (10 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain 3.8 g of a white solid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 49/1 to 19/1) to obtain 1.5 g white solid with a yield of 78.3%.
MS (ESI): m/z [1/2M+H]+, theoretical 1198.5, found 1198.1.
1H NMR (400 MHz, CDCl3) δ 8.80-8.01 (m, 2H), 7.79-7.45 (m, 5H), 7.40-7.27 (m, 6H), 7.05-6.40 (m, 3H), 5.38-5.30 (m, 4H), 5.29-5.19 (m, 3H), 5.11-5.05 (m, 3H), 4.78-4.72 (m, 3H), 4.60-4.49 (m, 1H), 4.20-4.06 (m, 9H), 4.06-3.95 (m, 11H), 3.96-3.86 (m, 9H), 3.76-3.68 (m, 6H), 3.66-3.29 (m, 38H), 2.59-2.54 (m, 2H), 2.13 (s, 12H), 2.02 (s, 12H), 1.96 (s, 12H), 1.94 (s, 12H), 1.20 (br s, 3H), 1.15 (br s, 3H).
1H NMR (400 MHz, DMSO-d6) δ 8.16 (br s, 1H), 7.99 (br s, 1H), 7.95-7.90 (m), 1H), 7.90-7.79 (m, 8H), 7.42-7.27 (m, 5H), 5.21 (d, J=3.4 Hz, 4H), 5.07 (s, 2H), 4.98 (dd, J=11.2, 3.4 Hz, 4H), 4.55 (d, J=8.5 Hz, 4H), 4.29 (q, J=6.7 Hz, 1H), 4.05-3.98 (m, 12H), 3.93-3.84 (m, 12H), 3.81-3.73 (m, 4H), 3.61-3.46 (m, 22H), 3.44-3.39 (m, 10H), 3.29-3.22 (m, 10H), 2.55-2.51 (m, 2H), 2.10 (s, 12H), 1.99 (s, 12H), 1.89 (s, 12H), 1.77 (s, 12H), 1.12 (s, 3H), 1.08 (s, 3H).
TEC02A-Z02 was synthesized by subjecting TEC02A-Z01 and BL-6-Z02 as starting materials to similar amidation condensation reaction steps for synthesis of BL-6-Z04.
TEC02A-Z02 (1.45 g, 0.61 mmol) was dissolved in tetrahydrofuran (30 mL) and added with 10% Pd/C (0.15 g, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 1.5 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid, concentrated under reduced pressure and dried under vacuum to obtain 1.28 g of a white solid product with a yield of 92%.
MS (ESI): m/z [1/2M+Na]+, theoretical 1175.5, found 1175.4.
Under N2 atmosphere and at room temperature, TEC02A (1.2 g, 0.52 mmol) and DIEA (0.3 g, 2.0 mmol) were successively added to a flask containing dichloromethane (12 mL) and stirred until the reaction mixture became clear. The reaction was dropwise added with pentafluorophenyl trifluoroacetate (0.3 g, 1.0 mmol) and carried out under stirring at room temperature for 0.5 h when LCMS showed that the conversion of the raw materials was completed. The reaction solution was washed with 8% aqueous sodium bicarbonate solution (12 mL×7) and extracted with dichloromethane (12 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (12 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a white solid crude product. The crude product was recrystallized (acetonitrile/methyl tert-butyl ether, 1/2) to obtain 1.1 g of a white solid product with a yield of 85.5%.
MS (ESI): m/z [1/3M+H]+, theoretical 824.6, found 824.3.
Under N2 atmosphere and at room temperature, TEC02A (40 mg, 0.017 mmol), Cy5-EtN (10 mg, 0.02 mmol), EDCI (4.8 mg, 0.03 mmol) and HOBt (2.4 mg, 0.02 mmol) were successively added to a flask containing dichloromethane (2 mL) and stirred at room temperature until the reaction mixture became clear. The reaction was then added with DIEA (7.8 mg, 0.06 mmol) and carried out under stirring for 20 h when LCMS showed that the reaction was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 9/1 to 4/1) to obtain 19.9 mg of a blue solid product with a yield of 40.8%.
MS (ESI): m/z [1/3 (M+2Na)]+, theoretical 957.4, found 957.1.
Under N2 atmosphere and at room temperature, TEC02A-Cy5-01 (10 mg, 0.0035 mmol) was added to a flask containing methanol (0.9 mL) and stirred until the reaction mixture became clear. The reaction was then added with 25% ammonia (0.1 mL), increased to 40° C. and carried out under stirring for 1 h when TLC showed that conversion of most of the raw materials was completed. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the crude product was purified by prep-HPLC (C18/5 μm, column temperature: 40° C.; water/acetonitrile, 95/5 to 5/95, containing 0.1% formic acid) to obtain 1.28 mg of a blue solid product with a yield of 15.5% and a purity of 98.4% (284 nm).
MS (ESI): m/z [1/2(M+Na)]+, theoretical 1172.6, found 1172.3.
TEC14A and TEC14A-Cy5 were synthesized by the same steps for synthesis of TEC02A and TEC02A-Cy5, except that GC-3 was replaced with GC-3L as a starting material. TEC14A, MS (ESI): m/z [1/2M+H]+, theoretical 1241.5, found 1241.4.
TEC14A-Cy5, MS (ESI): m/z [1/3 (M+2Na)]+, theoretical 848.1, found 848.3.
TEC06A, TEC06A-Pfp and TEC06A-Cy5 were synthesized by the same steps for synthesis of TEC02A, TEC02A-Pfp and TEC02A-Cy5, respectively, except that BL-6 was replaced with BL-7 and BL-6-Z02 was replaced with with BL-7-Z03.
Under N2 atmosphere and at room temperature, GC-3 (650 mg, 0.6 mmol), BL-7 (a HCl salt, 127 mg, 0.27 mmol), EDCI (157 mg, 0.82 mmol) and HOBt (74 mg, 0.55 mmol) were successively added to dichloromethane (10 mL) and stirred at room temperature until the reaction mixture became clear. The reaction was then added with DIEA (211 mg, 1.6 mmol) and carried out under stirring for 3 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (20 mL) to quench the reaction, and extracted with dichloromethane (10 mL×3), and the obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (10 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a white solid crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 50/1 to 10/1) to obtain 310 mg of a white solid product with a yield of 45%.
MS (ESI): m/z [1/3M+H]+, theoretical 841.4, found 841.1; m/z [1/2M+H]+, theoretical 1261.6, found 1261.5.
1H NMR (400 MHz, DMSO-d6) δ 8.15-8.09 (m, 1H), 7.97 (d, J=7.1 Hz, 1H), 7.91-7.81 (m, 8H), 7.73 (t, J=5.7 Hz, 1H), 7.40-7.29 (m, 5H), 5.21 (d, J=3.4 Hz, 4H), 5.07 (s, 2H), 4.98 (dd, J=11.2, 3.4 Hz, 4H), 4.55 (d, J=8.5 Hz, 4H), 4.30 (q, J=6.9 Hz, 1H), 4.06-3.99 (m, 12H), 3.93-3.83 (m, 12H), 3.82-3.74 (m, 4H), 3.64-3.55 (m, 8H), 3.54-3.48 (m, 12H), 3.45-3.40 (m, 8H), 3.31-3.22 (m, 8H), 3.17-3.08 (m, 1H), 3.07-2.93 (m, 2H), 2.33 (t, J=7.4 Hz, 2H), 2.10 (s, 12H), 1.99 (s, 12H), 1.89 (s, 12H), 1.77 (s, 12H), 1.56-1.48 (m, 2H), 1.40-1.32 (m, 2H), 1.30-1.24 (m, 10H), 1.22-1.18 (m, 10H), 1.11 (s, 3H), 1.07 (s, 3H).
TEC06A-Z01 (300 mg, 0.119 mmol) was dissolved in tetrahydrofuran (30 mL) and added with Pd/C (30 mg, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 1.5 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid and then concentrated under reduced pressure to obtain 263 mg of a white solid product with a yield of 91%.
MS (ESI): m/z [1/3M+H]+, theoretical 811.4, found 811.2; m/z [1/2M+H]+, theoretical 1216.5, found 1216.5.
Under N2 atmosphere and at room temperature, TEC06A (140 mg, 0.058 mmol) and DIEA (30 mg, 0.23 mmol) were successively added to a flask containing dichloromethane (12 mL) and stirred until the reaction mixture became clear. The reaction was dropwise added with pentafluorophenyl trifluoroacetate (32 mg, 0.11 mmol) and carried out under stirring for 4 h when LCMS showed that the conversion of the raw materials was complete. The reaction solution was washed with 8% aqueous sodium bicarbonate solution (10 mL×7) and extracted with dichloromethane (12 mL×3), and the obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (15 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a white solid crude product. The crude product was crystallized and purified (acetonitrile/methyl tert-butyl ether, 1/2) to obtain 90 mg of a white solid product with a yield of 60%.
MS (ESI): m/z [1/3M+H]+, theoretical 866.7, found 866.3.
1H NMR (400 MHz, DMSO-d6) δ 8.16-8.09 (m, 1H), 8.00-7.93 (m, 1H), 7.93-7.81 (m, 8H), 7.77-7.70 (m, 1H), 5.21 (d, J=3.3 Hz, 4H), 4.97 (dd, J=11.2, 3.4 Hz, 4H), 4.54 (d, J=8.4 Hz, 4H), 4.29 (q, J=6.9 Hz, 1H), 4.02 (s, 12H), 3.93-3.83 (m, 12H), 3.82-3.73 (m, 4H), 3.65-3.47 (m, 22H), 3.45-3.40 (m, 8H), 3.30-3.21 (m, 8H), 3.13 (q, J=7.5 Hz, 2H), 3.06-2.93 (m, 2H), 2.77 (t, J=7.2 Hz, 1H), 2.10 (s, 12H), 1.99 (s, 12H), 1.89 (s, 12H), 1.77 (s, 12H), 1.70-1.60 (m, 1H), 1.40-1.31 (m, 3H), 1.27-1.23 (m, 16H), 1.11 (s, 3H), 1.07 (s, 3H).
Under N2 atmosphere and at room temperature, TEC06A-Z01 (20 mg, 0.0082 mmol), Cy5-EtN (4.7 mg, 0.01 mmol), EDCI (2.4 mg, 0.015 mmol) and HOBt (1.7 mg, 0.015 mmol) were successively added to a flask containing dichloromethane (2 mL) and stirred at room temperature until the reaction mixture became clear. The reaction was then added with DIEA (3.9 mg, 0.03 mmol) and carried out under stirring for 20 h when LCMS showed that there were no residual raw materials. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 9/1 to 4/1) to obtain 20 mg of a blue solid product with a yield of 81%.
MS (ESI): m/z [1/3 (M−Cl+2Na)]+, theoretical 999.5, found 999.3.
Under N2 atmosphere and at room temperature, TEC06A-Cy5-01 (20 mg, 0.0067 mmol) was added to a flask containing methanol (3 mL) and stirred until the reaction mixture became clear. The reaction was added with 25% ammonia (0.5 mL), increased to 40° C. and carried out under stirring for 1 h when LCMS showed that there were no residual raw materials. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the crude product was purified by prep-HPLC (C18/5 μm, column temperature: 40° C.; water/acetonitrile, 95/5 to 5/95, containing 0.1% formic acid) to obtain 4.1 mg of a blue solid product with a yield of 24% and a purity of 99.9% (630 nm).
MS (ESI): m/z [1/3 (M−Cl+2Na)]+, theoretical 831.4, found 831.0.
Under N2 atmosphere, BL-9 (350 mg, 0.395 mmol), GN-1 (720 mg, 1.66 mmol), PyBOP (925 mg, 1.78 mmol) and triethylamine (279 mg, 2.76 mmol) were successively added to a flask containing dichloromethane (10 mL) and then the reaction was carried out under stirring at room temperature for 6 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (15 mL) and extracted with dichloromethane (10 mL×3). The obtained organic phase was dried over anhydrous sodium sulfate, filtered, and subjected to distillation under reduced pressure to remove the solvent. The residue was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 20/1) to obtain 383 mg of a light yellow solid with a yield of 37%.
MS (ESI): m/z [1/3M+H]+, theoretical 851.3, found 851.4.
TEC03A-Z01 (370 mg, 0.145 mmol) was dissolved in tetrahydrofuran (8 mL) and added with Pd/C (35 mg, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid and the filtrate was concentrated under reduced pressure to obtain 321 mg of a white solid product with a yield of 90%.
MS (ESI): m/z [1/2M+H]+, theoretical 1232.0, found 1231.9.
1H NMR (400 MHz, DMSO-d6) δ 8.92 (t, J=6.5 Hz, 1H), 8.54 (d, J=7.6 Hz, 1H), 8.17-8.09 (m, 3H), 8.05 (s, 1H), 7.62 (d, J=7.0 Hz, 4H), 7.49 (t, J=5.1 Hz, 4H), 5.21 (d, J=3.4 Hz, 4H), 5.02-4.95 (m, 8H), 4.68-4.60 (m, 1H), 4.25-4.12 (m, 8H), 4.12-4.02 (m, 4H), 3.97-3.89 (m, 4H), 3.89-3.70 (m, 14H), 3.66-3.57 (m, 17H), 3.57-3.46 (m, 17H), 3.43-3.35 (m, 2H), 3.35-3.29 (m, 8H), 2.32 (t, J=6.3 Hz, 8H), 2.10 (m, 12H), 1.98 (m, 12H), 1.88 (s, 12H), 1.78 (s, 12H).
Under N2 atmosphere and at room temperature, TEC03A (80 mg, 0.0325 mmol) and N-hydroxysuccinimide (6 mg, 0.0488 mmol) were successively added to a flask containing dichloromethane (3 mL), and under constant stirring, N,N′-dicyclohexylcarbodiimide (14 mg, 0.065 mmol) was added, and the reaction was carried out for 2 h when LCMS showed that the conversion of the raw materials was complete. The crude product obtained by concentration under reduced pressure was crystallized and purified with ethyl acetate and methyl tert-butyl ether to obtain 60.7 mg of a white solid product with a yield of 73%.
MS (ESI): m/z [1/3M+H]+, theoretical 854.0, found 854.1.
Synthesis of TEC04A: (1) TEC04A-Z01 was obtained by subjecting N-Fmoc-D-aspartic acid-4-tert-butyl ester as a start material to amidation condensation reaction with GN-6; (2) TEC04A-Z02 was obtained by subjecting TEC04A-Z01 to a de-tert-butylation reaction and then to amidation condensation reaction with GN-8; (3) TEC04A was obtained by subjected TEC04A-Z02 to de-9-fluorenylmethoxycarbonylation reaction and further to reaction with ε-caprolactone. TEC04A-PA was synthesized by subjecting TEC04A to reaction with a phosphoramidite reagent.
Under N2 atmosphere, under stirring and at room temperature, benzyl 6-aminocaproate (1.48 g, 6.67 mmol), (R)-1,4-bis-Boc-piperazine-2-formic acid (2.1 g, 6.36 mmol), EDCI (1.82 g, 9.54 mmol) and HOBt (0.859 g, 6.36 mmol) were successively added to a flask containing dichloromethane (16 mL), and then added with DIEA (1.64 g, 12.7 mmol), and the reaction was carried out for 4 h when LCMS showed that the reaction was completed. The reaction solution was added with pure water (20 mL) and extracted with dichloromethane (15 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (45 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 8/1) obtain 2.91 g of a light yellow solid, which was a condensed intermediate with two Boc groups. The obtained solid was added to a flask containing 1,4-dioxane (4 mL), and then added with 4 M HCl/1,4-dioxane solution (8 mL), and the reaction was carried out under stirring for 1 h when LCMS showed that the reaction was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the crude product was crystallized and purified with ethyl acetate to obtain 2.1 g of a light yellow solid product (a HCl salt) with a yield of 80%.
MS (ESI): m/z [M+H]+, theoretical 334.2, found 334.2.
1H NMR (400 MHz, DMSO-d6) δ 9.45 (s, 3H), 8.76 (s, 1H), 7.41-7.28 (m, 3H), 5.07 (s, 1H), 4.06 (d, J=11.0 Hz, 1H), 3.68-3.53 (m, 1H), 3.22-2.90 (m, 4H), 2.34 (t, J=7.4 Hz, 2H), 1.58-1.47 (m, 2H), 1.46-1.36 (m, 2H), 1.32-1.20 (m, 2H).
Under N2 atmosphere, GC-3 (1.5 g, 1.38 mmol) and triethylamine (0.21 g, 2.1 mmol) were successively added to a flask containing tetrahydrofuran (10 mL), and in an ice water bath of 0-5° C., 4-nitrophenyl chloroformate (0.31 g, 1.52 mmol) was added slowly, and the reaction was carried out under stirring for 1 h, and then added with pure water (20 mL) and extracted with dichloromethane (15 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (25 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain 4.1 g of a light yellow solid crude product, which was a carboxylic acid active ester intermediate. The intermediate was dissolved in pyridine/dichloromethane (5/10 mL), and added with BL-12 (a HCl salt, 0.25 g, 0.627 mmol) under stirring. The reaction was then carried out at room temperature for 16 h when LCMS showed that the reaction was complete. The reaction solution was concentrated under reduced pressure, and the residue was dissolved with ethyl acetate (20 mL) and washed with 26% aqueous sodium chloride solution (15 mL×2). The obtained organic phase was dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure, and the residue was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 15/1) to obtain 525 mg of a light yellow solid product with a yield of 34%.
MS (ESI): m/z [1/3M+H]+, theoretical 822.0, found 822.2.
TEC05A-Z01 (202 mg, 0.082 mmol) was dissolved in tetrahydrofuran (5 mL) and added with Pd/C (20 mg, 10 wt %). The reaction system was replaced with hydrogen three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 1 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid, then concentrated under reduced pressure and dried under vacuum to obtain 173 mg of a white solid product with a yield of 89%.
MS (ESI): m/z [1/2M+H]+, theoretical 1187.5, found 1187.3.
BL-10-Z02 was obtained by subjecting BL-10-Z01 and 6-aminocaproic acid as starting materials to similar amidation condensation reaction steps for synthesis of BL-8-Z01.
MS (ESI): m/z [M+H]+, theoretical 466.3, found 466.3.
BL-10 was obtained by subjecting BL-10-Z02 as a starting material to similar de-tert-butoxycarbonylation reaction steps for synthesis of BL-8.
MS (ESI): m/z [M+H]+, theoretical 266.1, found 266.1.
TEC07A was obtained by subjecting BL-10 and GC-3 as starting materials to similar amidation condensation reaction steps for synthesis of TEC02A-Z01.
MS (ESI): m/z [1/2M+H]+, theoretical 1198.5, found 1198.7.
1H NMR (400 MHz, DMSO-d6) δ 9.01 (br s, 2H), 8.28 (t, J=5.0 Hz, 1H), 8.11 (t, J=2.2 Hz, 1H), 7.95-7.91 (m, 2H), 7.84 (dd, J=9.2, 2.9 Hz, 4H), 7.69 (t, J=5.8 Hz, 4H), 5.21 (d, J=3.4 Hz, 4H), 4.98 (dd, J=11.3, 3.3 Hz, 4H), 4.55 (d, J=8.4 Hz, 4H), 4.05-3.99 (m, 13H), 3.91-3.84 (m, 12H), 3.82-3.74 (m, 4H), 3.73-3.65 (m, 8H), 3.61-3.47 (m, 14H), 3.44-3.41 (m, 8H), 3.29-3.24 (m, 8H), 3.21-3.16 (m, 2H), 2.23 (d, J=8.9 Hz, 2H), 2.10 (s, 12H), 1.99 (s, 12H), 1.89 (s, 12H), 1.77 (s, 12H), 1.61-1.49 (m, 4H), 1.40-1.32 (m, 2H), 1.12 (s, 6H).
Under N2 atmosphere, GN-3 (5.54 g, 5.2 mmol) and Boc-L-aspartic acid (CAS: 13726-67-5, 0.55 g, 2.36 mmol), EDCI (1.13 g, 5.9 mmol) and HOBt (0.57 g, 4.25 mmol) were successively added to a flask containing dichloromethane (30 mL) and the reaction was carried out under stirring at room temperature until the reaction mixture became clear. The reaction was then added with DIEA (1.22 g, 9.44 mmol) and then carried out under stirring for 8 h when LCMS showed the reaction was complete. The reaction solution was added with pure water (30 mL) and extracted with dichloromethane (20 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (30 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 25/1) to obtain 3.37 g of a white solid with a yield of 64%.
MS (ESI): m/z [1/2M+H]+, theoretical 1167.5, found 1167.2.
TEC08A-Z01 (3.1 g, 1.33 mmol) was added to a flask and dissolved with dichloromethane (10 mL), and under stirring at room temperature, trifluoroacetic acid (2 mL) was added slowly, and the reaction was carried out for 0.5 h when LCMS showed that the reaction was completed. The reaction solution was subjected to distillation under reduced pressure to remove the solvent and dried under vacuum to obtain 3.1 g of a light yellow solid product (TFA salt) with a yield of 99%.
MS (ESI): m/z [1/2M+H]+, theoretical 1117.5, found 1117.6.
Under N2 atmosphere, TEC08A-Z02 (a TFA salt, 0.37 g, 0.158 mmol) and triethylamine (0.032 g, 0.32 mmol) were successively added to a flask containing dichloromethane (8 mL), followed by slow addition of 4-nitrophenyl chloroformate (0.042 g, 0.21 mmol). The reaction was carried out for 1 h, then added with pure water (8 mL) and extracted with dichloromethane (8 mL×3). The obtained organic phases were combined, washed with cooled 0.5 N hydrochloric acid (5 mL) and 26% aqueous sodium chloride solution (8 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a light yellow solid crude product, which is a carbamate intermediate. The intermediate was dissolved in N,N-dimethylformamide (6 mL), and under stirring, diglycolamine (0.02 g, 0.19 mmol) was added, and the reaction was carried out at room temperature for 6 h when LCMS showed that the reaction was complete. The reaction solution was added with pure water (15 mL) and extracted with dichloromethane (10 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (15 mL×2), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The crude product was crystallized and purified with methyl tert-butyl ether to obtain 0.11 g of an off-white solid product with a yield of 54%.
MS (ESI): m/z [1/2M+H]+, theoretical 1183.0, found 1183.2.
1H NMR (400 MHz, DMSO-d6) δ 7.89 (t, J=5.7 Hz, 4H), 7.86 (d, J=8.2 Hz, 1H), 7.82 (d, J=9.2 Hz, 4H), 7.53 (d, J=7.8 Hz, 1H), 7.20 (d, J=7.1 Hz, 1H), 7.10 (t, J=4.6 Hz, 1H), 5.20 (d, J=3.4 Hz, 4H), 4.99-4.93 (m, 4H), 4.62-4.54 (m, 1H), 4.53 (d, J=8.5 Hz, 4H), 4.36-4.30 (m, 1H), 4.01 (s, 12H), 3.91-3.82 (m, 4H), 3.80-3.73 (m, 4H), 3.72-3.62 (m, 2H), 3.61-3.51 (m, 15H), 3.52-3.41 (m, 10H), 3.39-3.34 (m, 8H), 3.34-3.29 (m, 12H), 3.21-3.12 (m, 8H), 3.11-3.06 (m, 2H), 2.56 (d, J=6.9 Hz, 2H), 2.29 (t, J=6.5 Hz, 8H), 2.11-2.07 (m, 12H), 2.00-1.96 (m, 12H), 1.90-1.86 (m, 12H), 1.76 (s, 12H).
TEC08A-Z02 (a TFA salt, 0.52 g, 0.22 mmol), monobenzyl dodecanediate (0.077 g, 0.24 mmol), EDCI (0.059 g, 0.31 mmol) and HOBt (0.03 g, 0.22 mmol) were successively added to a flask containing dichloromethane (8 mL), and under stirring and at room temperature, DIEA (0.067 g, 0.66 mmol) was added, and the reaction was carried out under stirring for 8 h when LCMS showed that the reaction was completed. The reaction solution was added with pure water (10 mL) and extracted with dichloromethane (10 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (15 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure. The crude product was purified by silica gel column chromatography (200-300 meshes, dichloromethane/methanol, 10/1) to obtain 0.435 g of a white solid product with a yield of 78%.
MS (ESI): m/z [1/2M+Na]+, theoretical 1290.6, found 1290.9.
TEC12A-Z01 (305 mg, 0.12 mmol) was dissolved in tetrahydrofuran (8 mL) and added with Pd/C (30 mg, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when LCMS showed that the reaction was complete. The reaction mixture was filtered to remove the solid, concentrated under reduced pressure and dried under vacuum to obtain 270 mg of a white solid product with a yield of 92%.
MS (ESI): m/z [1/2M+H]+, theoretical 1223.5, found 1223.6.
1H NMR (400 MHz, DMSO-d6) δ 8.54 (d, J=7.9 Hz, 1H), 7.87 (t, J=5.6 Hz, 4H), 7.80 (d, J=8.6 Hz, 4H), 7.58-7.51 (m, 2H), 5.18 (d, J=3.5 Hz, 4H), 4.97-4.91 (m, 4H), 4.51 (d, J=8.4 Hz, 4H), 4.50-4.41 (m, 1H), 3.99 (s, 12H), 3.89-3.80 (m, 4H), 3.78-3.71 (m, 4H), 3.70-3.60 (m, 2H), 3.58-3.54 (m, 4H), 3.54-3.50 (m, 8H), 3.48-3.40 (m, 7H), 3.37-3.32 (m, 8H), 3.32-3.27 (m, 12H), 3.19-3.10 (m, 8H), 2.58 (dd, J=7.2, 1.8 Hz, 2H), 2.27 (t, J=6.6 Hz, 8H), 2.23 (t, J=8.3 Hz, 2H), 2.20-2.14 (m, 2H), 2.09-2.05 (m, 12H), 1.98-1.94 (m, 12H), 1.88-1.84 (m, 12H), 1.74 (s, 12H), 1.59-1.47 (m, 4H), 1.29-1.19 (m, 12H).
TEC09A and TEC13A were synthesized by the same steps for synthesis of TEC08A and TEC12A, except that Boc-L-aspartic acid (CAS: 13726-67-5) was replaced with N-Boc-iminodiacetic acid (CAS: 56074-20-5).
TEC09A, MS (ESI): m/z [1/2M+Na]+, theoretical 1205.0, found 1205.3.
TEC13A, MS (ESI): m/z [1/2M+H]+, theoretical 1223.5, found 1223.5.
TEC10A was synthesized by the same steps for synthesis of TEC13, except that GN-3 was replaced with GN-5.
MS (ESI): m/z [1/2M+H]+, theoretical 1209.5, found 1209.8.
1H NMR (400 MHz, DMSO-d6) δ 7.88 (t, J=5.7 Hz, 4H), 7.81 (d, J=9.2 Hz, 4H), 5.18 (d, J=3.4 Hz, 4H), 4.97-4.91 (m, 4H), 4.51 (d, J=8.5 Hz, 4H), 4.03 (s, 4H), 4.00 (s, 12H), 3.99-3.94 (m, 4H), 3.90-3.78 (m, 8H), 3.79-3.71 (m, 4H), 3.71-3.54 (m, 14H), 3.54-3.50 (m, 6H), 3.39-3.29 (m, 9H), 3.27-3.21 (m, 12H), 3.20-3.10 (m, 8H), 2.32-2.03 (m, 4H), 2.07 (s, 12H), 1.96 (s, 12H), 1.86 (s, 12H), 1.74 (s, 12H), 1.60-1.43 (m, 4H), 1.27-1.17 (m, 12H).
Under N2 atmosphere, dichloromethane (5 mL), TC10A-Z02 (112 mg, 0.0508 mmol) and triethylamine (15 mg, 0.152 mmol) were successively added to a flask, and under constant stirring, succinic anhydride (10 mg, 0.1 mmol) was added, and then the reaction was carried out for 1 h when LCMS showed that the conversion of the raw materials was complete. The reaction solution was subjected to distillation under reduced pressure to remove the solvent, and the residue was dissolved in dichloromethane (12 mL), washed with 8% aqueous sodium bicarbonate solution (5 mL×2), dried over anhydrous sodium sulfate, filtered, concentrated under reduced pressure, and crystallized and purified with methyl tert-butyl ether to obtain 72.6 mg of a white solid product with a yield of 62%.
MS (ESI): m/z [1/2M+H]+, theoretical 1153.5, found 1153.3.
Under N2 atmosphere, 1-Cbz-3-hydroxyazetidine (0.9 g, 4.34 mmol) was added to a flask containing tetrahydrofuran (10 mL), added with sodium hydride (60%, 165 mg, 4.12 mmol) in batches and stirred at room temperature for 0.5 h. The obtained mixture was slowly added to tetraethylene glycol monotosylate (1.43 g, 4.12 mmol) in tetrahydrofuran (12 mL) and the reaction was then carried out under stirring for 8 h when LCMS showed that the reaction was complete. The reaction was added with 25% aqueous ammonium chloride solution (30 mL) and extracted with ethyl acetate (15 mL×3). The obtained organic phases were combined, washed with 26% aqueous sodium chloride solution (25 mL), dried over anhydrous sodium sulfate and concentrated to obtain a crude product. The crude product was purified by silica gel column chromatography (200-300 meshes, petroleum ether/ethyl acetate, 4/1) to obtain a colorless transparent liquid. The obtained compound was dissolved in tetrahydrofuran (6 mL) and added with Pd/C (40 mg, 10 wt %). The reaction system was replaced with hydrogen for three times and the reaction was carried out under stirring and under hydrogen atmosphere (about 10-20 kPa higher than the standard atmospheric pressure) for 2 h when LCMS showed that the reaction was complete. The mixture was filtered to remove the solid, concentrated under reduced pressure and dried under vacuum to obtain 257 mg of a white solid product with a yield of 25%.
MS (ESI): m/z [M+H]+, theoretical 250.2, found 250.2.
Under N2 atmosphere, TEC11A-Z01 (62 mg, 0.027 mmol) and N-methylmorpholine (8 mg, 0.081 mmol) were successively added to a flask containing dichloromethane (7 mL), cooled in an ice bath to below 5° C., and added with isobutyl chloroformate (7 mg, 0.054 mmol), and the reaction was carried out under stirring for 1 h. The reaction solution was then concentrated under reduced pressure and dried under vacuum to obtain a light yellow solid. The solid was added with dichloromethane (7 mL) again, and under stirring, TC11A-Z02 (10 mg, 0.04 mmol) was added, and the reaction was carried out for 2 h when LCMS showed that the reaction was completed. The reaction solution was concentrated under reduced pressure, and the residue was crystallized and purified with ethyl acetate and methyl tert-butyl ether to obtain 36 mg of a light yellow solid product with a yield of 52%.
MS (ESI): m/z [1/3M+H]+, theoretical 846.4, found 846.5.
1H NMR (400 MHz, DMSO-d6) δ 7.92 (t, J=5.5 Hz, 4H), 7.84 (d, J=8.9 Hz, 4H), 5.20 (d, J=3.6 Hz, 4H), 4.98-4.93 (m, 4H), 4.52 (d, J=8.7 Hz, 4H), 4.10-4.05 (m, 1H), 4.02 (s, 4H), 3.99 (s, 12H), 3.96-3.92 (m, 4H), 3.91-3.79 (m, 10H), 3.77-3.72 (m, 6H), 3.70-3.55 (m, 14H), 3.54-3.49 (m, 10H), 3.47-3.28 (m, 21H), 3.28-3.19 (m, 12H), 3.20-3.09 (m, 8H), 2.72-2.63 (m, 2H), 2.52-2.48 (m, 2H), 2.09 (s, 12H), 1.97 (s, 12H), 1.88 (s, 12H), 1.75 (s, 12H).
Generally, a ligand compound has saccharide hydroxyl groups all protected by acetyl (Ac) groups and can be linked to a nucleic acid by chemical synthesis. The nucleic acid can be prepared by biological methods such as biological extraction, in vitro transcription, etc., and chemical solid phase synthesis technology. For the solid phase synthesis of nucleic acid, see the phosphoramidite coupling technique reported in J. Org. Chem., 2012, 77, 4566-4577 and Curr. Protoc. Nucleic Acid Chem., 2020, 81, e107.
The phosphoramidite-modified ligand compound can also be linked to a nucleic acid by the above solid phase synthesis. A carboxylic acid- and activated ester-modified ligand compound can be linked via an amide bond to an amino-modified nucleic acid by amidation condensation reaction (Bioorg. Med. Chem. Lett., 2004, 14, 801-804; ChemBioChem, 2019, 20, 1599-1605). The ligand of the present disclosure can also be modified with a maleimide group, and then subjected to Michael addition reaction with a sulfydryl-modified nucleic acid to form a carbon-sulfur bond (C—S) (Bioconjugate Chem. 2012, 23, 300-307; Chem. Commun., 2013, 49, 309-311). Alternatively, the ligand is modified with a pyridyldithiol group, and then linked to a sulfydryl-modified nucleic acid to form a disulfide bond (S—S) (Curr. Protoc. Nucleic Acid Chem., 2006, 4.28.1-4.28.21).
The binding rate of the ligand of the present disclosure to the ASGPR receptor of liver cancer cells was tested, with the ligand with hepatocellular ASGPR-targeting property, loaded in Inclisiran, a small interfering nucleic acid drug marketed by Alnylam, as a positive control (PC).
The ligand-receptor dissociation constant (Kd, which is the drug concentration required for half of the maximum effect, i.e. 50% of the receptors are occupied) was used as a measure of ligand-receptor binding capacity; and the lower the Kd value, the higher the binding capacity.
Test compounds: PC-Cy5 (positive control), TC01A-Cy5, TC07A-Cy5, TC09A-Cy5, TC10A-Cy5, TC12A-Cy5, TC17A-Cy5, TC18A-Cy5, TEC02A-Cy5, TEC06A-Cy5, TEC14A-Cy5
C57 mouse primary liver cells were isolated, and the cells were in a good state, had viability of 92%, and were at a density of 2×105 cells/400 μL.
The test compounds were dissolved with PBS and then diluted with complete medium for primary liver cells to various concentration gradients.
The cells was added with 100 μL of the test compound solution prepared according to the set concentration gradients (the test compounds was first prepared with PBS into a stock solution, which was then diluted to the set concentration gradients with complete medium) and incubated at 37° C. in the dark for 30 min.
After incubation, the cells were washed once with 500 μL of PBS.
The cells were added with typsin to remove fluorescence on the cell surface.
The cells were washed again with 500 μL of PBS and detected on machine.
Experimental results are shown in the following table:
The experimental results show that the ligand compounds of the present disclosure had a hepatocellular ASGPR receptor-binding capacity that reached the same order of magnitude as that of the positive control, indicating that they have good liver-targeting properties.
The binding rate of the ligand of the present disclosure to the ASGPR receptor of liver cancer cells was tested, with the ligand with hepatocellular ASGPR-targeting property, loaded in Inclisiran, a small interfering nucleic acid drug marketed by Alnylam, as a positive control (PC).
The ligand-receptor dissociation constant (Kd, which is the drug concentration required for half of the maximum effect, i.e. 50% of the receptors are occupied) was used as a measure of ligand-receptor binding capacity, and the lower the Kd value, the higher the binding capacity.
The binding curve of the positive control (PC-Cy5) to the receptor is shown as
The dissociation constants are shown in the following table:
The experimental results show that the ligand of the present disclosure (TEC02A) has superior binding capacity to the hepatocellular ASGPR receptor to the positive control, and indicating that it has a good targeting property.
Finally, it should be noted that the above examples are only used to assist those skilled in the art to understand the essence of the present disclosure, and are not intended to limit the protection scope of the present disclosure.
Number | Date | Country | Kind |
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202210114418.X | Jan 2022 | CN | national |
202210149606.6 | Feb 2022 | CN | national |
Filing Document | Filing Date | Country | Kind |
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PCT/CN2023/073154 | 1/19/2023 | WO |