Lung-Expressed Polypeptides

Information

  • Patent Application
  • 20080014594
  • Publication Number
    20080014594
  • Date Filed
    January 30, 2004
    20 years ago
  • Date Published
    January 17, 2008
    17 years ago
Abstract
Modulators of phosphatidic acid phosphatase type 2C and other polypeptides, highly expressed in cancers as compared to normal tissues, are provided for treatment of proliferative disorders such as cancer. A method is provided for detecting polypeptides that are overexpressed in cancer, whereby antibodies or binding proteins that specifically recognize these molecules are contacted with a patient's bodily fluid. The method provides an early diagnosis of cancer, and can detect recurrence and metastasis following an initial diagnosis. The invention further provides methods of treating cancer with therapeutic agents directed toward these protein and peptide biomarkers.
Description

BRIEF DESCRIPTION OF THE TABLES AND DRAWINGS
Tables

Table 1 lists the sequences in the Sequence Listing. Each is identified by a Five Prime Identification (FP ID) number, a SEQ ID NO. corresponding to the nucleotide coding sequence (SEQ ID NO. (N1)), a SEQ ID NO. corresponding to the encoded polypeptide sequence (SEQ ID NO. (P1)), and a SEQ ID NO. corresponding to the entire nucleotide sequence (SEQ ID NO. (N0)). Each is also identified by its public National Center for Information Biotechnology (NCBI) protein identification number (Protein ID).


Table 2 provides an annotated list of the sequences of the invention. Each sequence is identified by its FP ID and its NCBI protein identification number (Protein ID). An annotation is provided for each protein sequence, listing information about the protein and listing reference numbers through which more information about the protein can be obtained through the NCBI.


Table 3 provides information characteristic of each polypeptide. The polypeptides are identified by their FP ID. Each is classified according to its function, e.g., HG1014563 is a single transmembrane type 1 membrane protein (Classification). The length of the polypeptide is provided as the number of amino acid residues (Predicted Protein Length). Table 3 also specifies the result of an algorithm that predicts whether a sequence is secreted (TreeVote). This algorithm is constructed on the basis of a number of attributes that include hydrophobicity, two-dimensional structure, prediction of signal sequence cleavage site, and other parameters. This algorithm predicts whether the sequences listed in Table 3 are secreted as indicated in the classification column; a higher TreeVote indicates that the polypeptide is more likely to be secreted. The signal peptide coordinates (Signal Peptide Coords) are listed in terms of the amino acid residues beginning with “1” at the N-terminus of the polypeptide. The Mature Protein Coords refer to the coordinates of the amino acid residues of the mature polypeptide after cleavage of the signal peptide. Table 3 also specifies the coordinates of an alternative form of the mature protein (Alternate Mature Protein Coords). In instances where the mature protein start residue overlaps the signal peptide end residue, some of the amino acid residues may be cleaved off such that the mature protein does not start at the next amino acid residue from the signal peptides, resulting in the alternative mature protein coordinates. Finally, Table 3 provides the coordinates of the transmembrane and non-transmembrane sequences of the polypeptides. The transmembrane coordinates (TM Coords) refer to the transmembrane and are listed in terms of the amino acid residues beginning with “1” at the N-terminus of the polypeptide. The non-transmembrane coordinates (non-TM Coords) refer to the amino acids that are not transmembrane; these can include extracellular, cytoplasmic, and luminal sequences, and are listed in terms of the amino acid residues beginning with “1” at the N-terminus of the polypeptide.


Table 4 lists the coordinates of the Pfam domains of the polypeptides of the invention. Each is identified by a Five Prime Identification (FP ID) number, and the public NCBI protein identification number (Protein ID). The Pfam domains of those polypeptides that have at least one Pfam domain are listed (Pfam) and the Pfam coordinates are listed in terms of amino residues beginning with “1” at the N-terminus of the polypeptide, beginning at the beginning of the open reading frame.


Drawings


FIG. 1: PAP2C Expression in Cancer vs. Normal Tissue. FIG. 1 shows the relative gene expression of PAP2C in lung adenocarcinoma (Lung adeno), lung squamous cell carcinoma (Lung squamous), mixed lung adenocarcinoma and squamous cell cancer (Lung mixed), and colon adenocarcinoma (Colon adeno). It also shows the relative gene expression of PAP2C in normal lung, heart, kidney, and liver.



FIG. 2: COL11A1 Expression in Cancer vs. Normal Tissue. FIG. 2 shows the relative gene expression of COL11A1 in lung adenocarcinoma (Lung adeno), lung squamous cell carcinoma. (Lung squamous), mixed lung adenocarcinoma and squamous cell cancer (Lung mixed), and colon adenocarcinoma (Colon adeno). It also shows the relative gene expression of COL11A1 in normal lung, heart, kidney, and liver.



FIG. 3: Plexin A3 Expression in Cancer vs. Normal Tissue. FIG. 3 shows the relative gene expression of Plexin A3 in lung adenocarcinoma (Lung adeno), lung squamous cell carcinoma (Lung squamous), mixed lung adenocarcinoma and squamous cell cancer (Lung mixed), and colon adenocarcinoma (Colon adeno). It also shows the relative gene expression of Plexin A3 in normal lung, heart, kidney, and liver.



FIG. 4: LAR Expression in Cancer vs. Normal Tissue. FIG. 4 shows the relative gene expression of LAR in lung adenocarcinoma (Lung adeno), lung squamous cell carcinoma (Lung squamous), mixed lung adenocarcinoma and squamous cell cancer (Lung mixed), and colon adenocarcinoma (Colon adeno). It also shows the relative gene expression of LAR in normal lung, heart, kidney, and liver.



FIG. 5: C-peptidase D Expression in Cancer vs. Normal Tissue. FIG. 5 shows the relative gene expression of C-peptidase D in lung adenocarcinoma (Lung adeno), lung squamous cell carcinoma (Lung squamous), mixed lung adenocarcinoma and squamous cell cancer (Lung mixed), and colon adenocarcinoma (Colon adeno). It also shows the relative gene expression of C-peptidase D in normal lung, heart, kidney, and liver.



FIG. 6: Chr1 Orf9 Expression in Cancer vs. Normal Tissue. FIG. 6 shows the relative gene expression of Chr1 Orf9 in lung adenocarcinoma (Lung adeno), lung squamous cell carcinoma (Lung squamous), mixed lung adenocarcinoma and squamous cell cancer (Lung mixed), and colon adenocarcinoma (Colon adeno). It also shows the relative gene expression of Chr1 Orf9 in normal lung, heart, kidney, and liver.





MODES FOR CARRYING OUT THE INVENTION

The invention provides polynucleotides and polypeptides, listed in the Sequence Listing and Tables. These polypeptides and polynucleotides have novel functions, and provide methods of diagnosis, treatment, and prophylaxis for immune disorders and cancer, including cancers of the lung, bladder, prostate, breast, liver, pancreas, kidney, ovary, cervix, skin, bone, brain, and gastrointestinal tract, such as esophagus, stomach, colon, and rectum, as well as soft tissue sarcomas, leukemias, and lymphomas. Some of these polypeptides comprise regions that correspond to pfam domains. The regions of the polypeptides that correspond to a particular pfam domain can exhibit variations among polypeptides. For example, fibroblast growth factor receptors of the invention comprise epidermal growth factor (EGF) domains, which have variable polypeptide sequences and are encoded by variable nucleotide sequences.


The invention provides an isolated polynucleotide encoding a polypeptide or an isolated polypeptide encoded by the polynucleotide, wherein the polypeptide consists essentially of an amino acid sequence selected from among “non-TM Coords” in Table 3, “Pfam Coords” in Table 4, or the Sequence Listing. The amino acid sequence can be a sequence of at least 6 contiguous amino acid residues.


The invention also provides a method of making the polypeptides comprising providing a nucleic acid molecule that comprises a polynucleotide sequence that encodes the polypeptide, introducing the nucleic acid molecule into an expression system, and allowing expression of the polypeptide. The expression system can be a cell-free system, such as wheat germ extract, a rabbit reticulocyte, or a frog oocyte expression system. It can also be a bacterial expression system, a yeast expression system, an insect cell expression system, or a mammalian cell expression system.


The invention provides a pharmaceutical composition comprising a pharmaceutically acceptable carrier or excipient and the isolated polypeptide or isolated polynucleotide selected from the Tables, the “non-TM Coords” in Table 3, “Pfam Coords” in Table 4, or the Sequence Listing. The composition can comprise a phosphatidic acid phosphatase 2C polypeptide.


The invention also provides an isolated antibody specifically recognizing, binding to, and/or modulating the biological activity of at least one polypeptide or polynucleotide selected from the Tables, the “non-TM Coords” in Table 3, “Pfam Coords” in Table 4, or the Sequence Listing. The antibody can recognizing, bind to, and/or modulate the biological activity of phosphatidic acid phosphatase type 2 or variants thereof. The invention provides a pharmaceutical composition comprising a pharmaceutically acceptable carrier and such an antibody.


The antibody can be a monoclonal antibody, a polyclonal antibody, a single chain antibody, an antibody comprising a backbone of a molecule with an Ig domain or a TCR backbone, a targeting antibody, a neutralizing antibody, a stabilizing antibody, an enhancing antibody, an antibody agonist, an antibody antagonist, an antibody that promotes endocytosis of a target antigen, a cytotoxic antibody, an antibody that mediates ADCC, a human antibody, a non-human primate antibody, a non-primate animal antibody, a rabbit antibody, a mouse antibody, a rat antibody, a sheep antibody, a goat antibody, a horse antibody, a porcine antibody, a cow antibody, a chicken antibody, a humanized antibody, a primatized antibody, a chimeric antibody, an antigen binding fragment, a fragment comprising a variable region of a heavy chain or a light chain of an immunoglobulin, a fragment comprising a complementarity determining region or a framework region of an immunoglobulin, or other active fragments thereof, analogues thereof, and antagonists thereto. The antibody can comprise an antigen binding fragment of an immunoglobulin.


This antibody can be produced in a plant, an animal or in a cell. The cell can be a bacterial cell, a fungal cell, a plant cell, an insect cell, or a mammalian cell. The cell can also be a yeast cell, an Aspergillus cell, an SF9 cell, a High Five cell, a cereal plant cell, a tobacco cell, a tomato cell, or a CHO cell.


The antibody can comprise one or more cytotoxic component chosen from a radioisotope, a microbial toxin, a plant toxin, and a chemical compound. The antibody can function to specifically inhibit the binding of the polypeptide to a ligand, specifically inhibit the binding of the polypeptide to a substrate, specifically inhibit the binding of the polypeptide as a ligand specifically inhibit the binding of the polypeptide as a substrate, induce apoptosis, or induce ADCC or CDC.


The antibody can recognize, bind to, and/or modulate the biological activity of collagen type11 alpha1, carboxypeptidase D precursor, F-receptor linked protein tyrosine phosphatase, chromosome 1 open reading frame 9, ortholog of mouse plexin 3, KIAA0466, or beta-1,4-galactosyltransferase.


The antibody can specifically bind to or interfere with the activity of a polypeptide or a ligand of the polypeptide. It can be directed to a polypeptide sequence of at least 6, at least 8, at least 10, at least 12, at least 14, at least 16, at least 18, at least 20, or at least 22 contiguous amino acid residues chosen from the Sequence Listing and/or Tables. These contiguous residues can correspond to one or more extracellular domain of a polypeptide, or fragment thereof, analogue thereof, and/or antagonist thereto. These residues can correspond to a pfam domain. The antibody may recognize one or more antigenic epitope. It may specifically recognize one variant of the pfam domain, or more than one variant.


In another aspect, the invention provides a method for making an antibody by introducing a polypeptide; polynucleotide encoding the polypeptide, or a biologically active fragment thereof, into an animal in sufficient amount to elicit generation of antibodies specific to the polypeptide, wherein the polypeptide is described in the Sequence Listing or Tables, and recovering the antibodies. This method may further entail isolating a spleen from the animal injected with the polypeptide or polynucleotide or a fragment thereof, and recovering the antibodies from the spleen cells. It may also further entail making a hybridoma using spleen cells and selecting a hybridoma that secretes the antibodies. The invention provides making a polynucleotide library from the spleen cells, selecting a cDNA clone that produces the antibodies, and expressing the cDNA clone in an expression system to produce antibodies or fragments thereof. The cDNA clone, or a fragment thereof, can be introduced into an expression system to produce the antibody. This expression system can be an in vitro system, such as a cell-free system, a bacterial cell expression system, a yeast expression system, or a mammalian sell expression system.


The antibody can be produced either in vivo or in vitro, and can be produced by either a prokaryote or a eukaryote, such as a bacterial cell, a fungal cell, a plant cell, an insect cell, and a mammalian cell. Examples of suitable cells include yeast cells, Aspergillus cells, SF9 cells, High Five cells, CHO cells, cereal plant cells, tobacco cells, and tomato cells. The antibody can be isolated.


The antibody can function to specifically inhibit the binding of the polypeptide to a ligand, specifically inhibit the binding of the polypeptide to a substrate, specifically inhibit the binding of the polypeptide as a ligand, and/or specifically inhibit the binding of the polypeptide as a substrate.


The invention provides a host cell that produces an antibody that can recognize, bind to, and/or modulate the biological activity of from the Tables, the “non-TM Coords” in Table 3, “Pfam Coords” in Table 4, or the Sequence Listing. It also provides a bacteriophage, wherein such an antibody, or a fragment thereof, is displayed on the bacteriophage. The antibody may be displayed on the surface of the bacteriophage. The invention also provides a bacterial cell comprising the bacteriophage. It further provides a host cell that secretes an antibody of the invention.


The invention also provides a non-human animal injected with the polypeptide or polynucleotide from the Tables, the “non-TM Coords” in Table 3, “Pfam Coords” in Table 4, or the Sequence Listing.


The invention further provides a method for determining the presence of a polypeptide specifically binding to an antibody in a sample by allowing the antibody as described above to interact with the sample; and determining whether interaction between the antibody and the polypeptide has occurred.


The invention provides a method for determining the presence of an antibody specifically binding to a polypeptide or a polynucleotide in a sample by allowing the polypeptide or polynucleotide from the Tables, the “non-TM Coords” in Table 3, “Pfam Coords” in Table 4, or the Sequence Listing. to interact with the sample; and determining whether interaction between the antibody and the polypeptide or polynucleotide has occurred.


The invention provides a method for modulating the biological activity of a first human or non-human animal host cell by providing an antibody as described above and contacting the antibody with a first host cell, wherein the activity of the first host cell, or a second host cell, is modulated. The modulation of biological activity can be chosen from enhancing cell activity directly, enhancing cell activity indirectly, inhibiting cell activity directly, inhibiting cell activity indirectly, inducing apoptosis, inducing ADCC, and inducing CDC. The cell activity that is modulated can be signal transduction, transcription, and/or translation. This modulation can result in cell death and/or inhibition of cell growth. Contacting the antibody with a first host cell can result in recruitment of at least one second host cell. The first host cell can be a cancer cell. The first or second host cell can be a T cell, B cell, NK cell, dendritic cell, macrophage, muscle cell, stem cell, skin cell, fat cell, blood cell, brain cell, bone marrow cell, endothelial cell, retinal cell, bone cell, kidney cell, pancreatic cell, liver cell, spleen cell, prostate cell, cervical cell, ovarian cell, breast cell, lung cell, soft tissue cell, colorectal cell, or a cell of the gastrointestinal tract.


In a further aspect, the invention provides a method for modulating biological activity by providing an antibody, such as one described above, and contacting this antibody with a first human or non-human host cell, thereby modulating the activity of a first human or non-human animal host cell, or a second host cell. Modulators also take the form of small molecule modulators. The modulation of biological activity can take the form of enhancing cell activity directly, enhancing cell activity indirectly, inhibiting cell activity directly, and/or inhibiting cell activity indirectly. It can also take the form of modulating signal transduction, transcription, and/or translation. Modulation can result in cell growth, inhibition of cell growth and/or cell death.


One way this modulation can occur is by contacting the antibody with a first human or non-human host cell to result in the recruitment of the second host cell. The first host cell can, for example, be a cancer cell. Either the first or second host cell can be a T cell, B cell; NK cell, dendritic cell, macrophage, muscle cell, stem cell, skin cell, fat cell, blood cell, brain cell, bone marrow cell, endothelial cell, retinal cell, bone cell, kidney cell, pancreatic cell, liver cell, spleen cell, prostate cell, cervical cell, ovarian cell, breast cell, lung cell, liver cell, soft tissue cell, colorectal cell; or gastrointestinal tract cell.


The invention provides a method for screening for a modulator of polypeptide activity by providing a composition comprising a polypeptide or an active fragment thereof, wherein the polypeptide is chosen from the Sequence Listing or Table 1, allowing at least one modulator to contact the polypeptide, and selecting a modulator that binds to the polypeptide or interferes with the activity of the polypeptide. The polypeptide can be expressed on a cell surface. It can be an antibody. A modulator selected in this manner can be present in a composition with a pharmaceutically acceptable carrier.


The invention provides a method for identifying a modulator that modulates the biological activity of a polypeptide comprising providing at least one polypeptide chosen from among Table 1, the Pfam Coords in Table 4, the non-TM Coords in Table 3, and active fragments thereof by allowing at least one agent to contact the polypeptide; and selecting an agent that binds the polypeptide or affects the biological activity of the polypeptide. The polypeptide can be phosphatidic acid phosphatase type 2C. The polypeptide can also be collagen type11 alpha1, carboxypeptidase D precursor, F-receptor linked protein tyrosine phosphatase, chromosome 1 open reading frame 9, ortholog of mouse plexin 3, KIAA0466, or beta-1,4-galactosyltransferase. The modulator can be an antibody, a small molecule drug, a soluble receptor, or an extracellular fragment of the polypeptide.


The invention provides a modulator composition comprising a modulator and a pharmaceutically acceptable carrier, wherein the modulator is chosen from among one obtainable by the methods and antibodies described above a soluble receptor that competes for ligand binding to the polypeptide of claim 1 an extracellular fragment that competes for ligand binding to the polypeptide of claim 1, a RNAi molecule, an anti-sense molecule, or a ribozyme that inhibits the transcription or translation of the polynucleotide.


In yet a further aspect, the invention provides a method for diagnosing a proliferative disease such as cancer, psoriasis, and ulcerative colitis, or an immune or inflammatory disease such as rheumatoid arthritis, osteoarthritis, psoriasis, inflammatory bowel disease, and multiple sclerosis, by providing an antibody, allowing the antibody to contact a patient sample, and detecting specific binding between the antibody and an antigen in the sample to determine whether the subject has proliferative disease such as cancer. The invention also provides a method for diagnosing a proliferative disease, by providing a polypeptide that specifically binds the antibody, allowing the polypeptide to contact a patient sample and detecting specific binding between the polypeptide and any interacting molecule in the sample to determine whether the subject has a proliferative disease.


The invention provides a method for diagnosing cancer in a patient by providing an antibody described above, and allowing it to contact a patient sample, and detecting specific binding between the antibody and an antigen in the sample to determine whether the subject has cancer.


The invention also provides a method for diagnosing cancer in a patient by providing a method for diagnosing cancer in a patient, by providing a polypeptide that specifically binds an antibody as described above, allowing the polypeptide to contact a patient sample; and detecting specific binding between the polypeptide and any interacting molecule in the sample to determine whether the subject has cancer.


The invention provides a kit comprising a pharmaceutical composition comprising a pharmaceutically acceptable carrier, an antibody as described above, and instructions for administration into a human or non-human animal.


The invention provides a method for treating uncontrolled proliferative growth in a subject comprising administering a composition comprising an isolated antibody that specifically recognizes, binds to, and/or modulates the biological activity of at least one polypeptide or polynucleotide selected from the Tables, the “non-TM Coords” in Table 3, “Pfam Coords” in Table 4, or the Sequence Listing.


The invention provides a method for treating uncontrolled proliferative growth in a subject comprising administering a modulator to a subject, wherein the modulator binds to or interferes with the activity of at least one polypeptide or polynucleotide selected from the Tables, the “non-TM Coords” in Table 3, “Pfam Coords” in Table 4, or the Sequence Listing. The polypeptide can be phosphatidic acid phosphatase type 2C or COL11A1. The uncontrolled proliferative growth can be a tumor or psoriasis. The tumor can be a lung tumor, a colon tumor, a bladder tumor, a liver tumor, an ovarian tumor, a breast tumor, a kidney tumor, or a pancreatic tumor. The composition can administered, for example, orally, parenterally, by implantation, by inhalation, intranasally, intravenously, intra-arterially, intracardiacally, subcutaneously, intraperitoneally, transdermally, intraventricularly, intracranially, and intrathecally.


The invention yet also provides a method of treating a proliferative disease by providing an antibody composition that comprises a first antibody or fragment thereof that specifically binds to a first epitope of a first polypeptide or a biologically active fragment thereof, wherein the first polypeptide is encoded by a polynucleotide sequence or polypeptide sequence found in Table 1 and/or the Sequence Listing, and administering the antibody composition to a subject in need of such treatment. The antibody composition can further comprise a second antibody that binds specifically to or interferes with the activity of a second epitope of the first polypeptide or to a first epitope of a second polypeptide. The second polypeptide can be chosen from the Sequence Listing and/or Tables.


The invention provides therapeutic agent screening, such as small molecule drug screening; therapeutic applications, such as in the treatment of a variety of diseases and conditions, including, e.g., cancer, proliferative disorders, immune disorders, inflammatory disorders, and other metabolic disorders.


The invention further provides a kit comprising an antibody as described above, and instructions for its use.


The invention yet further provides method of gene therapy, comprising providing a polynucleotide comprising a nucleic acid molecule encoding the antibody, of claim 1, and administering the polynucleotide to a subject in need of such treatment.


The invention provides a method for prophylactically or therapeutically treating a subject by providing a vaccine and administering the vaccine to the subject; wherein the vaccine comprises a polynucleotide or a polypeptide found in the Sequence Listing or Tables, or a fragment thereof, an analogue thereof, or an antagonist thereto. The vaccine can be a cancer vaccine, and the polypeptide can be a cancer antigen. Therapeutic vaccines can be in the form of nucleic acid or polypeptide vaccines, and can be administered alone, such as naked DNA, or can be facilitated, such as via the use of a viral vector, microsomes, or liposomes.


The invention also provides a method of inhibiting transcription or translation of a first polynucleotide encoding a first polypeptide by providing a second polynucleotide that hybridizes to the first polynucleotide, wherein the first polynucleotide comprises a polynucleotide sequence chosen from a polynucleotide or a polypeptide found in the Sequence Listing or Tables, or a fragment thereof, an analogue thereof, or an antagonist thereto, and allowing the first polynucleotide to contact the second polynucleotide. The second polynucleotide can comprise an antisense molecule, a ribozyme, and/or an interfering RNA (iRNA) molecule.


The invention yet also provides a method of treating a proliferative disorder by administering a modulator to a subject in need of such treatment, wherein the modulator binds to a cell surface molecule that is overexpressed in the disorder. The modulator can be an antibody, for example, one that is capable of initiating ADCC.


The invention provides a method of treating a lung tumor in a subject by providing a modulator composition as described above and administering the modulator composition to the subject. The modulator can be an antibody. The antibody can specifically recognize, binds to, or modulate the biological activity of a polypeptide, and the polypeptide can be PAP2C or COL11A1.


The invention provides a method of treating a breast tumor in a subject by providing the modulator composition as described above and administering the modulator composition to the subject. This modulator can be an antibody. The antibody can specifically recognize, bind to, or modulate the biological activity of a polypeptide, and the polypeptide can be PAP2C or COL11A1


The invention provides a method of treating a colon tumor in a subject by providing a modulator composition as described above and administering the modulator composition to the subject. The modulator can be an antibody. The antibody can specifically recognize, bind to, or modulate the biological activity of the polypeptide. The polypeptide can be PAP2C or COL11A1.


The invention provides a method of treating a liver tumor in a subject by providing a modulator composition as described above and administering the modulator composition to the subject. The modulator can be an antibody. The antibody can specifically recognize, bind to, or modulate the biological activity of the polypeptide. The polypeptide can be PAP2C or COL11A1.


The invention provides a method of treating an ovarian tumor in a subject by providing a modulator composition as described above and administering the modulator composition to the subject. The modulator can be an antibody. The antibody can specifically recognize, bind to, or modulate the biological activity of the polypeptide. The polypeptide can be PAP2C or COL11A1.


The invention provides a method of treating a pancreatic tumor in a subject by providing a modulator composition as described above and administering the modulator composition to the subject. The modulator can be an antibody. The antibody can specifically recognize, bind to, or modulate the biological activity of the polypeptide. The polypeptide can be PAP2C or COL11A1.


The invention provides a method of treating a kidney tumor in a subject by providing a modulator composition as described above and administering the modulator composition to the subject. The modulator can be an antibody. The antibody can specifically recognize, bind to, or modulate the biological activity of the polypeptide. The polypeptide can be PAP2C or COL11A1.


The invention provides a method of treating a stomach tumor in a subject by providing a modulator composition as described above and administering the modulator composition to the subject. The modulator can be an antibody. The antibody can specifically recognize, bind to, or modulate the biological activity of the polypeptide. The polypeptide can be PAP2C or COL11A1.


The invention provides a method of treating a tumor in a subject by providing a modulator composition as described above and administering the modulator composition to the subject. The modulator can be an antibody. The antibody can specifically recognize, bind to, or modulate the biological activity of the polypeptide. The polypeptide can be PAP2C or COL11A1.


The invention provides a method of treating an immune disorder in a subject by providing a modulator composition as described above and administering the modulator composition to the subject. The modulator can be an antibody. The antibody can specifically recognize, bind to, or modulate the biological activity of the polypeptide. The polypeptide can be PAP2C or COL11A1.


Other embodiments of the invention will be apparent to those skilled in the art from consideration of the specification and practice of the invention disclosed herein. It is intended that the specification and examples be considered as exemplary only, with a true scope and spirit of the invention being indicated by the following claims.


EXAMPLES

The examples, which are intended to be purely exemplary of the invention and should therefore not be considered to limit the invention in any way, also describe and detail aspects and embodiments of the invention discussed above, The examples are not intended to represent that the experiments below are all or the only experiments performed. Efforts have been made to ensure accuracy with respect to numbers used (e.g. amounts, temperature, etc.) but some experimental errors and deviations should be accounted for. Unless indicated otherwise, parts are parts by weight, molecular weight is weight average molecular weight, temperature is in degrees Centigrade, and pressure is at or near atmospheric.


While the present invention has been described with reference to the specific embodiments thereof, it should be understood by those skilled in the art that various changes may be made and equivalents may be substituted without departing from the true spirit and scope of the invention. In addition, many modifications can be made to adapt a particular situation, material, composition of matter, process, process step or steps, to the objective, spirit and scope of the present invention. All such modifications are intended to be within the scope of the claims appended hereto.


Example 1
Production of Antibodies to PAP2C

PAP2C can be expressed in vitro in a cell free expression system, using wheat germ lysate or E. coli lysate. Alternatively, PAP2C can be expressed in a baculovirus system (Doerfler, W., Bohm, P., eds. 1987; Luckow, V. and Summers, M. 1988). The expressed protein can be substantially purified (Deutscher, M. P., et al., eds. 1990) and used for injection into mice for production of antibodies. The mice can be normal mice, in which case, the resulting monoclonal antibodies can be made in accordance to conventional techniques, but will be humanized for use in the treatment of humans. The expressed protein can also be used for injection into XenoMouse or other similar mice owned by Abgenix, Inc. (Fremont, Calif., USA), Medarex, Inc. (Princeton, N.J., USA) or Kirin (Japan), which are capable of producing human antibodies.


The expressed protein can also be used to screen for binding with Fab fragments of antibodies displayed on bacteriophages, using phage display libraries, such as is available from Cambridge Antibody Technology (Cambridge, U.K.), MorphoSys (Martinsried/Munich, Germany) or Dyax Corp. (Cambridge, Mass., USA). The Fab fragments that bind the PAP2C polypeptide with high affinity can be validated by immunohistochemistry as binding to tumor tissues. The desired Fab fragment can fused to an appropriate Fc fragment to make a synthetic antibody.


INDUSTRIAL APPLICABILITY

The compositions and methods of the invention are useful in the diagnosis, treatment, or prevention of proliferative and immune disorders.


REFERENCES

The specification is most thoroughly understood in light of the following references, all of which are hereby incorporated in their entireties. The disclosures of the patents and other references cited above are also hereby incorporated by reference.

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SEQUENCE LISTING

A sequence listing transmittal sheet and a sequence listing in paper format accompanies this application.


Tables









TABLE 1







Sequence Listing












SEQ.

SEQ.




ID. NO.
SEQ. ID. NO.
ID. NO.


FP ID
(N1)
(P1)
(N0)
Protein ID





HG1014556
SEQ. ID.
SEQ. ID. NO. 4
SEQ. ID.
NP_003703



NO. 1

NO. 8


HG1014559
SEQ. ID.
SEQ. ID. NO. 5
SEQ. ID.
NP_803545



NO. 2

NO. 9


HG1014560
SEQ. ID.
SEQ. ID. NQ. 6
SEQ. ID.
NP_808211



NO. 3

NO. 10


HG1014558

SEQ. ID. NO. 7

PAP2domain
















TABLE 2







Annotated Sequences









FP ID
Protein ID
Annotation





HG1014563
730241:473936
gi|730241|sp|P39656|OST4_HUMAN Dolichyl-diphosphooligosaccharide-protein




glycosyltransferase 48 kDa subunit precursor (Oligosaccharyl transferase 48 kDa subunit) (DDOST




48 kDa subunit)


HG1014564
proteinkinase98A:protein-
gi|17975765|ref|NP_059145.1| ephrin receptor EphB2 isoform 1 precursor; developmentally-regulated



kinase98B
eph-related tyrosine kinase; elk-related tyrosine kinase; eph tyrosine kinase 3 [Homo





sapiens]



HG1014565
NP_006501:NM_006510
gi|5730009|ref|NP_006501.1| ret finger protein isoform alpha; tripartite motif protein TRIM27




[Homo sapiens]


HG1014566
2738927:2738926
gi|2738927|gb|AAB97675.1| unknown protein [Homo sapiens]


HG1014567
3646130:3646129
gi|3646130|emb|CAA09376.1| ATP(GTP)-binding protein [Homo sapiens]


HG1014568
7512502:7512502_genewise
gi|7512502|pir||T01371 hypothetical protein 327024.1 - human


HG1014569
88918:550030
gi|88918|pir||C30127 transmembrane carcinoembryonic antigen 3 precursor - human


HG1014570
4240243:4240242
gi|4240243|dbj|BAA74900.1| KIAA0877 protein [Homo sapiens]


HG1014571
NP_056438:NM_015623
putative ankyrin-repeat containing protein [Homo sapiens].


HG1014572
NP_001703:NM_001712
gi|19923195|ref|NP_001703.2| carcinoembryonic antigen-related cell adhesion molecule 1 (biliary




glycoprotein) [Homo sapiens]


HG1014573
NP_003703:NM_003712
gi|4505977|ref|NP_003703.1| phosphatidic acid phosphatase type 2C isoform 1; phosphatidic acid




phosphohydrolase type 2c; type-2 phosphatidic acid phosphatase-gamma [Homo sapiens]


HG1014574
proteinkinase16A:protein-
gi|4501895|ref|NP_001096.1| activin A type I receptor precursor, activin A receptor, type II-like kinase 2;



kinase16B
hydroxyalkyl-protein kinase [Homo sapiens]


HG1014575
602434:602433
gi|602434|gb|AAA86990.1| GABA/noradrenaline transporter


HG1014576
NP_005177:NM_005186
gi|12408656|ref|NP_005177.2| calpain 1, large subunit; calpain, large polypeptide L1; calcium-activated




neutral proteinase [Homo sapiens]


HG1014577
3327124:3327123
gi|3327124|dbj|BAA31630.1| KIAA0655 protein [Homo sapiens]


HG1014578
NP_001934:NM_001943
gi|4503403|ref|NP_001934.1| desmoglein 2 preproprotein; HDGC, included [Homo sapiens]


HG1014579
NP_002417:NM_002426
gi|4505207|ref|NP_002417.1| matrix metalloproteinase 12 preproprotein; macrophage




metalloelastase; macrophage elastase [Homo sapiens]_gi|435970|gb|AAA58658.1| metalloproteinase


HG1014580
NP_002236:NM_002245
gi|4504847|ref|NP_002236.1| potassium channel, subfamily K, member 1; potassium inwardly-




rectifying channel, subfamily K, member 1; potassium channel, subfamily K, member 1 (TWIK-1)




[Homo sapiens]


HG1014581
3882213:3882212
gi|3882213|dbj|BAA34466.1| KIAA0746 protein [Homo sapiens]


HG1014582
2439970:2439969
gi|2439970|gb|AAB71756.1| multidrug resistance-associated protein homolog [Homo sapiens]


HG1014583
NP_005859:NM_005868
gi|5031611|ref|NP_005859.1| BET1 homolog; Golgi vesicular membrane trafficking protein p18;




Bet1p homolog [Homo sapiens]_gi|27805424|sp|O15155|BET1_HUMAN BET1 homolg (Golgi




vesicular membrane trafficking protein p18) (hBET1)_gi|2253426|gb|AAB62941.1| Bet1p homolog




[Homo sapiens]


HG1014584
NP_005778:NM_005787
gi|5031953|ref|NP_005778.1| asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-




mannosyltransferase); Not56 (D. melanogaster)-like protein [Homo sapiens]


HG1014585
887368:887367
gi|887368|gb|AAC42003.1| ORF; putative


HG1014586
NP_055688:NM_014873
gi|7661996|ref|NP_055688.1| KIAA0205 gene product [Homo sapiens]


HG1014587
7513004:3043577
gi|7513004|pir||T00073 hypothetical protein KIAA0527 - human (fragment)


HG1014588
20521660:20521659
gi|20521660|dbj|BAA34508.2| KIAA0788 protein [Homo sapiens]


HG1014589
12230553:1665780
gi|12230553|sp|Q92545|RW1_HUMAN RW1 protein


HG1014590
NP_059984:NM_017514
gi|8923793|ref|NP_059984.1| SEX gene [Homo sapiens]


HG1014591
NP_002831:NM_002840
gi|4506311|ref|NP_002831.1| protein tyrosine phosphatase, receptor type, F isoform 1 precursor;




protein tyrosine phosphatase, receptor type, F polypeptide; receptor-linked protein-tyrosine




phosphatase LAR; leukocyte antigen-related tyrosine phosphatase; LCA-homolog; leukocyte




antigen-related (LAR) PTP receptor [Homo sapiens]


HG1014592
3043698:3043697
KIAA0587 protein [Homo sapiens].


HG1014593
14133205:14133204
gi|14133205|dbj|BAA32311.2| KIAA0466 protein [Homo sapiens]


HG1014594
NP_055453:NM_014638
KIAA0450 gene product [Homo sapiens].


HG1014595
NP_064422:NM_020038
gi|9955974|ref|NP_064422.1| ATP-binding cassette, sub-family C, member 3 isoform MRP3B;




canicular multispecific organic anion transporter [Homo sapiens]


HG1014596
1580781:1580780
gi|1580781|gb|AAB09603.1| beige-like protein [Homo sapiens]


HG1014597
2136093:403386
gi|2136093|pir||A48280 receptor tyrosine kinase - human


HG1014598
NP_005119:NM_005128
gi|4826653|ref|NP_005119.1| pad-1-like [Homo sapiens]


HG1014599
559330:559329
gi|559330|dbj|BAA07526.1| KIAA0077 [Homo sapiens]


HG1014600
1665787:1665786
gi|1665787|dbj|BAA13390.1| Similar to a C. elegans protein encoded in cosmid C52E12 (U50135)




[Homo sapiens]


HG1014601
NP_003307:NM_003316
gi|21359841|ref|NP_003307.2| tetratricopeptide repeat domain 3; tetratricopeptide repeat protein 3




(TPR repeat protein D) [Homo sapiens]


HG1014602
NP_055098:NM_014283
gi|7656940|ref|NP_055098.1| chromosome 1 open reading frame 9; membrane protein CH1 [Homo





sapiens]



HG1014603
21903712:22004648
gi|21903712|gb|AAC51775.2| carboxypeptidase D [Homo sapiens]


HG1014604
403460:403459
gi|403460|gb|AAA36776.1| transformation-related protein


HG1014605
20140021:1888315
gi|20140021|sp|Q12884|SEPR_HUMAN Seprase (Fibroblast activation protein alpha) (Integral




membrane serine protease) (170-kDa melanoma membrane-bound gelatinase)


HG1014606
2996578:2996577
gi|2996578|emb|CAA12176.1| glucosyltransferase [Homo sapiens]


HG1014607
729008:306474
gi|729008|sp|Q08345|DDR1_HUMAN Epithelial discoidin domain receptor 1 precursor (Tyrosine-




protein kinase CAK) (Cell adhesion kinase) (Tyrosine kinase DDR) (Discoidin receptor tyrosine




kinase) (TRK E) (Protein-tyrosine kinase RTK 6) (CD167a antigen)


HG1014608
NP_001296:NM_001305
gi|4502877|ref|NP_001296.1| claudin 4; Clostridium perfringens enterotoxin receptor; Clostridium





perfringens enterotoxin receptor 1 [Homo sapiens]



HG1014609
NP_066192:NM_020982
gi|11141861|ref|NP_066192.1| claudin 9 [Homo sapiens]


HG1014610
NP_006293:NM_006302
gi|5453662|ref|NP_006293.1| mannosyl-oligosaccharide glucosidase; processing A-glucosidase I




[Homo sapiens]


HG1014611
4691263:4557422
gi|4691263|emb|CAB41571.1| dJ738P15.2.1 (ectonucleoside triphosphate diphosphohydrolase 6




(putative function), isoform 1) [Homo sapiens]


HG1014612
NP_006806:NM_006815
gi|5803149|ref|NP_006806.1| coated vesicle membrane protein [Homo sapiens]


HG1014613
NP_036380:NM_012248
gi|15011844|ref|NP_036380.2| selenophosphate synthetase 2; selenide, water dikinase 2; selenium




donor protein 2; selenophosphate synthase [Homo sapiens]


HG1014614
5459516:5459515
gi|5459516|dbj|BAA82407.1| phosphatidylethanolamine N-methyltransferase [Homo sapiens]


HG1014615
proteinkinase99A:protein-
protein kinase EphB3



kinase99B


HG1014616
NP_055557:NM_014742
gi|7662028|ref|NP_055557.1| transmembrane 9 superfamily protein member 4 [Homo sapiens]


HG1014617
4009517:4009516
gi|4009517|gb|AAC95470.1| type 2 iodothyronine deiodinase [Homo sapiens]


HG1014618
1220309:1220308
gi|1220309|gb|AAA91834.1| gamma-glutamic carboxylase


HG1014619
NP_005679:NM_005688
gi|5032101|ref|NP_005679.1| ATP-binding cassette, sub-family C, member 5; canalicular




multispecific organic anion transporter C [Homo sapiens]


HG1014620
NP_004985:NM_004994
gi|4826836|ref|NP_004985.1| matrix metalloproteinase 9 preproprotein; 92 kD type IV collagenase;




matrix metalloproteinase 9 (gelatinase B, 92 kD gelatinase, 92 kD type IV collagenase); gelatinase B;




macrophage gelatinase; type V collagenase [Homo sapiens]


HG1014621
1478281:1478280
gi|1478281|gb|AAC50629.1| neutral amino acid transporter B


HG1014622
NP_055759:NM_014944
gi|7662374|ref|NP_055759.1| calsyntenin 1 [Homo sapiens]


HG1014623
NP_066925:NM_021102
gi|10863909|ref|NP_066925.1| serine protease inhibitor, Kunitz type, 2; placental bikunin; Kunitz-




type serine protease inhibitor; hepatocyte growth factor activator inhibitor type 2 [Homo sapiens]


HG1014624
NP_000201:NM_000210
gi|4557675|ref|NP_000201.1| integrin alpha chain, alpha 6 [Homo sapiens]


HG1014625
NP_006661:NM_006670
gi|5729718|ref|NP_006661.1| 5T4 oncofetal trophoblast glycoprotein; 5T4-antigen [Homo sapiens]


HG1014626
NP_000204:NM_000213
gi|21361207|ref|NP_000204.2| integrin, beta 4 [Homo sapiens]


HG1014627
NP_005767:NM_005776
gi|5031639|ref|NP_005767.1| cornichon-like [Homo sapiens]


HG1014628
3288487:3288486
gi|3288487|emb|CAA75875.1| COL1A1 and PDGFB fusion transcript [Homo sapiens]


HG1014629
13124728:2285960
gi|13124728|sp|P78334|GAE_HUMAN Gamma-aminobutyric-acid receptor epsilon subunit




precursor (GABA(A) receptor)


HG1014630
239160:239159
gi|239160|gb|AAB20355.1| integrin alpha 6B [Homo sapiens]


HG1014631
NP_003701:NM_003710
gi|4504329|ref|NP_003701.1| hepatocyte growth factor activator inhibitor 1 isoform 2 precursor;




hepatocyte growth factor activator inhibitor 1; Kunitz-type protease inhibitor 1 [Homo sapiens]


HG1014632
NP_002345:NM_002354
gi|4505059|ref|NP_002345.1| tumor-associated calcium signal transducer 1 precursor; membrane




component, chromosome 4, surface marker (35 kD glycoprotein); MK-1 antigen; antigen identified




by monoclonal antibody AUA1; human epithelial glycoprotein-2 [Homo sapiens]


HG1014633
NP_036451:NM_012319
gi|12751475|ref|NP_036451.2| solute carrier family 39 (zinc transporter), member 6; LIV-1 protein,




estrogen regulated; solute carrier family 39 (metal ion transporter), member 6 [Homo sapiens]


HG1014634
NP_002241:NM_002250
gi|4504859|ref|NP_002241.1| intermediate conductance calcium-activated potassium channel protein




1; putative erythrocyte intermediate conductance calcium-activated potassium Gardos channel




[Homo sapiens]


HG1014635
3387977:3387976
gi|3387977|gb|AAC28653.1| ABC transporter [Homo sapiens]


HG1014636
NP_001297:NM_001306
gi|4502875|ref|NP_001297.1| claudin 3; Clostridium perfringens enterotoxin receptor 2; rat ventral




prostate.1-like protein; claudin-3; CPE-receptor 2 [Homo sapiens]


HG1014637
3132896:3132895
gi|3132896|gb|AAC39733.1| beta-1,4-galactosyltransferase [Homo sapiens]


HG1014638
20521832:20521831
gi|20521832|dbj|BAA09768.3| KIAA0147 protein [Homo sapiens]


HG1014639
NP_003830:NM_003839
gi|4507565|ref|NP_003830.1| tumor necrosis factor receptor superfamily, member 11a precursor;




activator of NFKB; receptor activator of nuclear factor-kappa B; osteoclast differentiation factor




receptor [Homo sapiens]


HG1014640
NP_001100:NM_001109
gi|4557253|ref|NP_001100.1| a disintegrin and metalloproteinase domain 8 precursor [Homo





sapiens]



HG1014641
NP_055080:NM_014265
gi|7656863|ref|NP_055080.1| a disintegrin and metalloproteinase domain 28 isoform 1 preproprotein




[Homo sapiens]


HG1014642
NP_005497:NM_005506
gi|5031631|ref|NP_005497.1| scavenger receptor class B, member 2; lysosomal integral membrane




protein II; CD36 antigen (collagen type I receptor, thrombospondin receptor)-like 2; 85 kDa




lysosomal sialoglycoprotein scavenger receptor class B, member 2 [Homo sapiens]


HG1014643
NP_006685:NM_006694
gi|5729889|ref|NP_006685.1| jumping translocation breakpoint, PAR protein [Homo sapiens]


HG1014644
4456467:4456466
gi|4456467|emb|CAB37294.1| TM7XN1 protein [Homo sapiens]


HG1014645
NP_002217:NM_002226
gi|21704277|ref|NP_002217.3| jagged 2 isoform a precursor [Homo sapiens]


HG1014646
NP_003769:NM_003778
gi|9994175|ref|NP_003769.1| UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase 4; beta-N-




acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase 4 [Homo sapiens]


HG1014647
1504030:1504029
gi|1504030|dbj|BAA13214.1| similar to a C. elegans protein encoded in cosmid K12D12(Z49069)




[Homo sapiens]


HG1014692
NP_068547:NM_021777
gi|11496994|ref|NP_068547.1| a disintegrin and metalloproteinase domain 28 isoform 3




preproprotein [Homo sapiens]


HG1014693
NP_068548:NM_021778
gi|11496996|ref|NP_068548.1| a disintegrin and metalloproteinase domain 28 isoform 2




preproprotein [Homo sapiens]


HG1014694
NP_068819:NM_021984
gi|12707554|ref|NP_068819.1| gamma-aminobutyric acid (GABA) A receptor, epsilon isoform 2




[Homo sapiens]


HG1014695
NP_068822:NM_021987
gi|12707556|ref|NP_068822.1| gamma-aminobutyric acid (GABA) A receptor, epsilon isoform 3




[Homo sapiens]


HG1014696
NP_068830:NM_021990
gi|12707558|ref|NP_068830.1| gamma-aminobutyric acid (GABA) A receptor, epsilon isoform 2




[Homo sapiens]


HG1014697
NP_076984:NM_024079
gi|13129070|ref|NP_076984.1| asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-




glucosyltransferase) [Homo sapiens]


HG1014698
NP_079327:NM_025051
gi|13376580|ref|NP_079327.1| hypothetical protein FLJ23022 [Homo sapiens]


HG1014699
NP_108648:NM_030658
putative ankyrin-repeat containing protein [Homo sapiens]


HG1014700
NP_085076:NM_030587
gi|13929465|ref|NP_085076.1| UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase 2 isoform a;




beta-4-GalT2; beta-N-acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase 2 [Homo





sapiens]



HG1014701
NP_055954:NM_015139
gi|14028875|ref|NP_055954.1| solute carrier family 35 (UDP-glucuronic acid/UDP-N-




acetylgalactosamine dual transporter), member D1; UDP-glucuronic acid/UDP-N-




acetylgalactosamine dual transporter [Homo sapiens]


HG1014702
NP_009197:NM_007266
gi|14149629|ref|NP_009197.1| XPA binding protein 1; MBD2 interactor protein; putative




ATP(GTP)-binding protein [Homo sapiens]


HG1014703
NP_112212:NM_030950
gi|15011933|ref|NP_112212.1| ret finger protein isoform beta; tripartite motif protein TRIM27




[Homo sapiens]


HG1014704
NP_073572:NM_022735
gi|15826852|ref|NP_073572.2| golgi complex associated protein 1; golgi resident protein GCP60;




peripherial benzodiazepine receptor associated protein; golgi phosphoprotein 1; PBR associated




protein; golgi complex associated protein 1, 60 kDa; PKA (RIalpha)-associated protein [Homo





sapiens]



HG1014705
NP_079461:NM_025185
putative ankyrin-repeat containing protein [Homo sapiens]


HG1014706
NP_006717:NM_006726
gi|16904381|ref|NP_006717.1| LPS-responsive vesicle trafficking, beach and anchor containing;




vesicle trafficking, beach and anchor containing; cell division cycle 4-like [Homo sapiens]


HG1014707
NP_004434:NM_004443
gi|17975768|ref|NP_004434.2| ephrin receptor EphB3 precursor, EPH-like tyrosine kinase-2; human




embryo kinase 2 [Homo sapiens]


HG1014708
NP_056171:NM_015356
gi|18141297|ref|NP_056171.1| scribble [Homo sapiens]


HG1014709
NP_001845:NM_001854
gi|18375518|ref|NP_001845.2| alpha 1 type XI collagen isoform A preproprotein; collagen XI,




alpha-1 polypeptide [Homo sapiens]


HG1014710
NP_569707:NM_130440
gi|18860896|ref|NP_569707.1| protein tyrosine phosphatase, receptor type, F isoform 2 precursor;




protein tyrosine phosphatase, receptor type, F polypeptide; receptor-linked protein-tyrosine




phosphatase LAR; leukocyte antigen-related tyrosine phosphatase; LCA-homolog; leukocyte




antigen-related (LAR) PTP receptor [Homo sapiens]


HG1014711
NP_005673:NM_005682
gi|19923768|ref|NP_005673.2| G protein-coupled receptor 56; EGF-TM7-like [Homo sapiens]


HG1014712
NP_005207:NM_005216
gi|20070197|ref|NP_005207.2| dolichyl-diphosphooligosaccharide-protein glycosyltransferase




[Homo sapiens]


HG1014713
NP_004433:NM_004442
gi|21396504|ref|NP_004433.2| ephrin receptor EphB2 isoform 2 precursor; developmentally-




regulated eph-related tyrosine kinase; elk-related tyrosine kinase; eph tyrosine kinase 3 [Homo





sapiens]



HG1014714
NP_660142:NM_145159
gi|21704279|ref|NP_660142.1| jagged 2 isoform b precursor [Homo sapiens]


HG1014715
NP_001295:NM_001304
gi|22202611|ref|NP_001295.2| carboxypeptidase D precursor [Homo sapiens]


HG1014716
NP_680477:NM_148172
gi|22538478|ref|NP_680477.1| phosphatidylethanolamine N-methyltransferase isoform 1 [Homo





sapiens]



HG1014717
NP_680478:NM_148173
gi|22538480|ref|NP_680478.1| phosphatidylethanolamine N-methyltransferase isoform 2 [Homo





sapiens]



HG1014718
NP_054733:NM_014014
gi|40217847|ref|NP_054733.2| U5 snRNP-specific profein, 200-KD [Homo sapiens]


HG1014719
NP_803545:NM_177526
gi|29171745|ref|NP_803545.1| phosphatidic acid phosphatase type 2C isoform 2; phosphatidic acid




phosphohydrolase type 2c; type-2 phosphatidic acid phosphatase-gamma [Homo sapiens]


HG1014720
NP_808211:NM_177543
gi|29171747|ref|NP_808211.1| phosphatidic acid phosphatase type 2C isoform 3; phosphatidic acid




phosphohydrolase type 2c; type-2 phosphatidic acid phosphatase-gamma [Homo sapiens]


HG1014721
NP_003771:NM_003780
gi|4502347|ref|NP_003771.1| UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase 2 isoform b;




beta-4-GalT2; beta-N-acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase 2 [Homo





sapiens]



HG1014722
NP_000079:NM_000088
gi|4502945|ref|NP_000079.1| alpha 1 type I collagen preproprotein; Collagen I, alpha-1 polypeptide;




osteogenesis imperfecta type IV; collagen of skin, tendon and bone, alpha-1 chain [Homo sapiens]


HG1014723
NP_001533:NM_001542
gi|4504627|ref|NP_001533.1| immunoglobulin superfamily, member 3; immunoglobin superfamily,




member 3 [Homo sapiens]


HG1014724
NP_001238:NM_001247
gi|4557423|ref|NP_001238.1| ectonucleoside triphosphate diphosphohydrolase 6; CD39-like 2;




interleukin 6 signal transducer-2 [Homo sapiens]


HG1014725
NP_004952:NM_004961
gi|4826738|ref|NP_004952.1| gamma-aminobutyric acid (GABA) A receptor, epsilon isoform 1




precursor [Homo sapiens]


HG1014726
NP_038464:NM_013436
gi|7305303|ref|NP_038464.1| NCK-associated protein 1 [Homo sapiens]


HG1014727
NP_054644:NM_013989
gi|7549803|ref|NP_054644.1| deiodinase, iodothyronine, type II; thyroxine deiodinase, type II




[Homo sapiens]


HG1014728
NP_054699:NM_013993
gi|7669483|ref|NP_054699.1| discoidin receptor tyrosine kinase isoform a; PTK3A protein tyrosine




kinase 3A; cell adhesion kinase; epithelial discoidin domain receptor 1; neurotrophic tyrosine




kinase, receptor, type 4; neuroepithelial tyrosine kinase; mammarian carcinoma kinase 10 [Homo





sapiens]



HG1014729
NP_054700:NM_013994
gi|7669485|ref|NP_054700.1| discoidin receptor tyrosine kinase isoform c; PTK3A protein tyrosine




kinase 3A; cell adhesion kinase; epithelial discoidin domain receptor 1; neurotrophic tyrosine




kinase, receptor, type 4; neuroepithelial tyrosine kinase; mammarian carcinoma kinase 10 [Homo





sapiens]



HG1014730
NP_057311:NM_016227
gi|17705322|ref|NP_057311.1| membrane protein CH1 [Homo sapiens]


HG1014731
NP_057725:NM_016641
gi|7706617|ref|NP_057725.1| membrane interacting protein of RGS16 [Homo sapiens]


HG1014732
NP_005680:NM_005689
gi|9955963|ref|NP_005680.1| ATP-binding cassette, sub-family B, member 6 [Homo sapiens]


HG1014733
NP_003777:NM_003786
gi|9955970|ref|NP_003777.2| ATP-binding cassette, sub-family C, member 3 isoform MRP3;




canicular multispecific organic anion transporter [Homo sapiens]


HG1014734
NP_064421:NM_020037
gi|9955972|ref|NP_064421.1| ATP-binding cassette, sub-family C, member 3 isoform MRP3A;




canicular multispecific organic anion transporter [Homo sapiens]


HG1014735
10047349:10047348
KIAA1636 protein [Homo sapiens]


HG1014736
10435899:10435898
gi|10435899|dbj|BAB14698.1| unnamed protein product [Homo sapiens]


HG1014737
10438061:10438060
gi|10438061|dbj|BAB15159.1| unnamed protein product [Homo sapiens]


HG1014738
10443048:4826835
gi|10443048|emb|CAC10459.1| bA465L10.4 (matrix metalloproteinase 9 (gelatinase B, 92 kD




gelatinase, 92 kD type IV collagenase) (CLG4B)) [Homo sapiens]


HG1014739
10863065:10863064
gi|10863065|dbj|BAB16838.1| type II iodothyronine deiodinase [Homo sapiens]


HG1014740
10863067:10863066
gi|10863067|dbj|BAB16839.1| type II iodothyronine deiodinase [Homo sapiens]


HG1014741
11245444:11245443
gi|11245444|gb|AAG33617.1| ATP-binding cassette half-transporter [Homo sapiens]


HG1014742
11245446:11245443
gi|11245446|gb|AAG33618.1| ATP-binding cassette half-transporter [Homo sapiens]


HG1014743
12082644:12082643
gi|12082644|gb|AAG48559.1| beige-like protein [Homo sapiens]


HG1014744
12275809:12275808
gi|12275809|gb|AAG50147.1| beta-1,4-galactosyltransferase [Homo sapiens]


HG1014745
12314010:24797104
gi|12314010|emb|CAC10350.1| dJ74M1.1.1 (tyrosine kinase isoform 1) [Homo sapiens]


HG1014746
12314011:17975764
gi|12314011|emb|CAC10351.1| dJ74M1.1.2 (tyrosine kinase isosform 2) [Homo sapiens]


HG1014747
12653567:12653566
gi|12653567|gb|AAH00557.1| Phosphatidylethanolamine N-methyltransferase, isoform 1 [Homo





sapiens]



HG1014748
12697587:12697586
gi|12697587|dbj|BAB21594.1| type II iodothyronine deiodinase [Homo sapiens]


HG1014749
12803155:12803154
selenophosphate synthetase 2 [Homo sapiens]


HG1014750
12803915:12803914
Similar to glucosidase I [Homo sapiens]


HG1014751
13279206:13279205
gi|13279206|gb|AAH04313.1| ALG3 protein [Homo sapiens]


HG1014752
13325454:13325453
gi|13325454|gb|AAH04523.1| UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase 4 [Homo





sapiens]



HG1014753
13517342:7705321
gi|13517342|gb|AAK28742.1| membrane protein CH1 [Homo sapiens]


HG1014754
13517410:7705321
gi|13517410|gb|AAK28776.1| membrane protein CH1 [Homo sapiens]


HG1014755
13898643:13898642
gi|13898643|gb|AAK48842.1| discoidin domain receptor DDR1d [Homo sapiens]


HG1014756
13898645:13898644
gi|13898645|gb|AAK48843.1| discoidin domain receptor DDR1e [Homo sapiens]


HG1014757
14043169:14043168
gi|14043169|gb|AAH07572.1| Unknown (protein for IMAGE: 3030210) [Homo sapiens]


HG1014758
14043179:14043178
gi|14043179|gb|AAH07577.1| Unknown (protein for IMAGE: 3139787) [Homo sapiens]


HG1014759
14043430:14043429
gi|14043430|gb|AAH07705.1| Serine protease inhibitor, Kunitz type, 2 [Homo sapiens]


HG1014760
14249879:14249878
Unknown (protein for IMAGE: 3343159) [Homo sapiens]


HG1014761
14250593:14250592
gi|14250593|gb|AAH08751.1| Calpain 1, large subunit [Homo sapiens]


HG1014762
14550482:14550481
Unknown (protein for IMAGE: 3936863) [Homo sapiens]


HG1014763
14602901:14602900
Unknown (protein for IMAGE: 4123572) [Homo sapiens]


HG1014764
14724070:22042187
similar to KIAA0077 [Homo sapiens]


HG1014765
14726864:14726863
similar to KIAA0377 gene product [Homo sapiens]


HG1014766
15029376:15029375
gi|15029376|gb|AAK81862.1| potassium intermediate/small conductance calcium-activated channel,




subfamily N, member 4 [Homo sapiens]


HG1014767
15214801:15214800
gi|15214801|gb|AAH12535.1| LRBA protein [Homo sapiens]


HG1014768
15214917:15214916
gi|15214917|gb|AAH12595.1| BET1 protein [Homo sapiens]


HG1014769
15559191:9955969
gi|15559191|emb|CAC69553.1| multidrug resistance associated protein [Homo sapiens]


HG1014770
15680237:15680236
gi|15680237|gb|AAH14473.1| CEACAM1 protein [Homo sapiens]


HG1014771
15779135:15779134
Unknown (protein for IMAGE: 3503007) [Homo sapiens]


HG1014772
15929829:15929828
gi|15929829|dbj|AAH15334.1| Unknown (protein for IMAGE: 4391654) [Homo sapiens]


HG1014773
1632766:1632765
gi|1632766|gb|BAA12303.1| TPRDIII [Homo sapiens]


HG1014774
16552593:16552592
gi|16552593|dbj|BAB71347.1| unnamed protein product [Homo sapiens]


HG1014775
1688260:4505206
gi|1688260|gb|AAB36943.1| metalloelastase [Homo sapiens]


HG1014776
1747371:1747370
gi|1747371|gb|CAA68914.1| putative GABA-gated chloride channel [Homo sapiens]


HG1014777
179629:179624
gi|179629|gb|AAA52289.1| pro-alpha-1 collagen type 1 [Homo sapiens]


HG1014778
179630:22328091
gi|179630|gb|AAA52290.1| pro-alpha-1 collagen type 1 [Homo sapiens]


HG1014779
179631:179626
gi|179631|gb|AAA52291.1| pro-alpha-1 collagen type 1 [Homo sapiens]


HG1014780
18027796:18027795
gi|18027796|gb|AAL55859.1| unknown [Homo sapiens]


HG1014781
18044628:18044627
gi|18044628|gb|AAH19679.1| Unknown (protein for IMAGE: 4932488) [Homo sapiens]


HG1014782
18676646:18676645
gi|18676646|dbj|BAB84975.1| FLJ00222 protein [Homo sapiens]


HG1014783
1888409:22328091
gi|1888409|emb|CAA67261.1| collagen type I alpha 1 [Homo sapiens]


HG1014784
19684107:19684106
gi|19684107|gb|AAH25980.1| Ectonucleoside triphosphate diphosphohydrolase 6 (putative function)




[Homo sapiens]


HG1014785
19913138:20130436
gi|19913138|emb|CAD19636.1| glucosidase I [Homo sapiens]


HG1014786
20521698:20521697
gi|20521698|dbj|BAA76777.2| KIAA0933 protein [Homo sapiens]


HG1014787
20540895:20540894
similar to CG11943-PB [Homo sapiens]


HG1014788
20541809:20541808
similar to KIAA0877 protein [Homo sapiens]


HG1014789
21104416:21104415
gi|21104416|dbj|BAB93478.1| dolichyl-diphosphooligosaccharide-protein glycosyltransferase




[Homo sapiens]


HG1014790
21434741:21434740
gi|21434741|gb|AAM53530.1| beige-like protein; CDC4L protein [Homo sapiens]


HG1014791
21706696:21706695
gi|21706696|gb|AAH33902.1| CLSTN1 protein [Homo sapiens]


HG1014792
21739637:21739636
gi|21739637|emb|CAD38864.1| hypothetical protein [Homo sapiens]


HG1014793
21748877:21748876
gi|21748877|dbj|BAC03499.1| unnamed protein product [Homo sapiens]


HG1014794
21750497:21750496
gi|21750497|dbj|BAC03787.1| unnamed protein product [Homo sapiens]


HG1014795
21752841:21752840
gi|21752841|dbj|BAC04245.1| unnamed protein product [Homo sapiens]


HG1014796
21757691:21757690
gi|21757691|dbj|BAC05175.1| unnamed protein product [Homo sapiens]


HG1014797
21929079:19923767
gi|21929079|dbj|BAC06124.1| seven transmembrane helix receptor [Homo sapiens]


HG1014798
219495:219494
gi|219495|dbj|BAA02063.1| biliary glycoprotein [Homo sapiens]


HG1014799
21961497:21961496
Similar to golgi complex associated protein 1, 60 kDa [Homo sapiens]


HG1014800
2197067:2197066
gi|2197067|gb|AAB61285.1| Jagged 2 [Homo sapiens]


HG1014801
22044017:22044016
similar to KIAA0527 protein [Homo sapiens]


HG1014802
22328092:22328091
gi|22328092|gb|AAH36531.1| Alpha 1 type I collagen preproprotein [Homo sapiens]


HG1014803
22532481:4826835
gi|22532481|gb|AAM97934.1| matrix metalloproteinase 9 (gelatinase B, 92 kD gelatinase, 92 kD type




IV collagenase) [Homo sapiens]


HG1014804
2270923:33910
gi|2270923|gb|AAC51632.1| beta4-integrin [Homo sapiens]


HG1014805
2270924:21361206
gi|2270924|gb|AAC51633.1| beta4-integrin [Homo sapiens]


HG1014806
2270925:33956
gi|2270925|gb|AAC51634.1| beta4-integrin [Homo sapiens]


HG1014807
2285958:2285960
gi|2285958|emb|CAA70903.1| GABRE [Homo sapiens]


HG1014808
2293523:21361206
gi|2293523|gb|AAB65422.1| integrin variant beta4E [Homo sapiens]


HG1014809
239158:239157
gi|239158|gb|AAB20354.1| integrin alpha 6A [Homo sapiens]


HG1014810
2432002:2432001
gi|2432002|gb|AAB71189.1| Jagged 2 [Homo sapiens]


HG1014811
24496473:24496472
gi|24496473|gb|AAN60219.1| peripherial benzodiazepine receptor-associated protein [Homo





sapiens]



HG1014812
24658543:24658542
Similar to huntingtin interacting protein 1 related [Homo sapiens]


HG1014813
24659964:24659963
gi|24659964|gb|AAH39498.1| SLC39A6 protein [Homo sapiens]


HG1014814
2598968:2598967
gi|2598968|gb|AAB84031.1| Kunitz-type protease inhibitor [Homo sapiens]


HG1014815
2605947:2605946
gi|2605947|gb|AAB84216.1| hJAG2.del-E6 [Homo sapiens]


HG1014816
2662364:2687860
gi|2662364|dbj|BAA23666.1| DCRR1 [Homo sapiens]


HG1014817
2662375:473936
gi|2662375|dbj|BAA23670.1| oligosaccharyltransferase [Homo sapiens]


HG1014818
27477822:27477821
similar to Sel-1 homolog precursor (Suppressor of lin-12-like protein) (Sel-1L) [Homo sapiens]


HG1014819
27480564:27480563
hypothetical protein XP_211921 [Homo sapiens]


HG1014820
27499509:27499508
similar to Huntingtin interacting protein 1 related (Hip1-related) (Hip 12) [Homo sapiens]


HG1014821
27529860:27529859
gi|27529860|dbj|BAA86462.2| KIAA1148 protein [Homo sapiens]


HG1014822
2765402:2765401
gi|2765402|emb|CAA74706.1| jagged2 protein [Homo sapiens]


HG1014823
27694125:27694124
gi|27694125|gb|AAH43358.1| Unknown (protein for IMAGE: 3904894) [Homo sapiens]


HG1014824
28175817:28175816
gi|28175817|gb|AAH43602.1| PSME4 protein [Homo sapiens]


HG1014825
28207917:28207916
gi|28207917|emb|CAD62612.1| unnamed protein product [Homo sapiens]


HG1014826
28273134:28273133
gi|28273134|dbj|BAC56930.1| FLJ00414 protein [Homo sapiens]


HG1014827
28273138:28273137
gi|28273138|dbj|BAC56932.1| FLJ00417 protein [Homo sapiens]


HG1014828
28277412:28277411
gi|28277412|gb|AAH44255.1| NUP205 protein [Homo sapiens]


HG1014829
28279793:28279792
gi|28279793|gb|AAH46126.1| ABCC3 protein [Homo sapiens]


HG1014830
28374245:28374244
gi|28374245|gb|AAH45549.1| Carboxypeptidase D precursor [Homo sapiens]


HG1014831
285917:285916
gi|285917|dbj|BAA03537.1| large erk kinase [Homo sapiens]


HG1014832
28981412:28981411
gi|28981412|gb|AAH48768.1| PTPRF protein [Homo sapiens]


HG1014833
2924620:2924619
gi|2924620|dbj|BAA25024.1| hepatocyte growth factor activator inhibitor type 2 [Homo sapiens]


HG1014834
2951948:7637876
gi|2951948|gb|AAC05440.1| Unknown gene product [Homo sapiens]


HG1014835
30016:30015
gi|30016|emb|CAA30731.1| unnamed protein product [Homo sapiens]


HG1014836
31223:31222
gi|31223|emb|CAA41981.1| elk-related kinase [Homo sapiens]


HG1014837
3132270:3132269
gi|3132270|dbj|BAA28146.1| multidrug resistance-associated protein(MRP)-like protein-2 (MLP-2)




[Homo sapiens]


HG1014838
3172147:219494
gi|3172147|gb|AAC18433.1| BGP_HUMAN [Homo sapiens]


HG1014839
33911:33910
gi|33911|emb|CAA36134.1| unnamed protein product [Homo sapiens]


HG1014840
33942:33941
gi|33942|emb|CAA42099.1| integrin alpha6 subunit [Homo sapiens]


HG1014841
33957:33956
gi|33957|emb|CAA36433.1| integrin beta 4 subunit [Homo sapiens]


HG1014842
35658:35657
gi|35658|emb|CAA25394.1| prepro-alpha-1 collagen [Homo sapiens]


HG1014843
3582767:3582766
gi|3582767|gb|AAC35281.1| putative erythrocyte intermediate conductance calcium-activated




potassium Gardos channel [Homo sapiens]


HG1014844
37200:37199
gi|37200|emb|CAA32940.1| TM2-CEA precursor [Homo sapiens]


HG1014845
37204:37203
gi|37204|emb|CAA34405.1| TM3-CEA protein [Homo sapiens]


HG1014846
3721836:3721835
gi|3721836|dbj|BAA33713.1| HIP1R [Homo sapiens]


HG1014847
3721898:12804512
gi|3721898|dbj|BAA33736.1| hJTB [Homo sapiens]


HG1014848
407590:407589
gi|407590|gb|AAB27856.1| type I collagen pro alpha 1(I) chain propeptide [Homo sapiens]


HG1014849
4102188:4102187
gi|4102188|gb|AAD01430.1| MRP3 [Homo sapiens]


HG1014850
4587083:4587082
gi|4587083|dbj|BAA76608.1| MRP5 [Homo sapiens]


HG1014851
4755085:14719826
gi|4755085|gb|AAB94054.2| pro alpha 1(I) collagen [Homo sapiens]


HG1014852
4826563:4826562
gi|4826563|emb|CAA76658.2| multidrug resistance protein 3 (ABCC3) [Homo sapiens]


HG1014853
4836765:4836764
gi|4836765|gb|AAD30545.1| G-protein-coupled receptor [Homo sapiens]


HG1014854
4894209:4894208
gi|4894209|gb|AAD32301.1| cornichon-like protein [Homo sapiens]


HG1014855
495678:495677
gi|495678|dbj|BAA06506.1| tyrosine kinase precursor [Homo sapiens]


HG1014856
5002294:4826835
gi|5002294|gb|AAD37404.1| matrix metalloproteinase 9; MMP9; gelatinase B; type IV collagenase




[Homo sapiens]


HG1014857
5006891:5006890
gi|5006891|gb|AAD37716.1| ABC protein [Homo sapiens]


HG1014858
5031476:5031475
gi|5031476|gb|AAD38185.1| MRP3s1 protein [Homo sapiens]


HG1014859
5114047:5114046
gi|5114047|gb|AAD40191.1| putative RNA helicase [Homo sapiens]


HG1014860
5726563:4557674
gi|5726563|gb|AAD48469.1| integrin alpha 6 [Homo sapiens]


HG1014861
5851985:15488900
gi|5851985|emb|CAB55434.1| dJ25J6.4 (ret finger protein) [Homo sapiens]


HG1014862
606777:29447
gi|606777|emb|CAA47694.1| biliary glycoprotein [Homo sapiens]


HG1014863
6941892:6941891
gi|6941892|gb|AAF32265.1| RFP transforming protein [Homo sapiens]


HG1014864
7022121:7022120
gi|7022121|dbj|BAA91495.1| unnamed protein product [Homo sapiens]


HG1014865
7106834:7106833
gi|7106834|gb|AAF36142.1| HSPC222 [Homo sapiens]


HG1014866
7159057:7159056
gi|7159057|gb|AAF37612.1| type II iodothyronine deiodinase [Homo sapiens]


HG1014867
762938:30092
gi|762938|emb|CAA29605.1| unnamed protein product [Homo sapiens]


HG1014868
7768766:4826652
gi|7768766|dbj|BAA95548.1| C21orf5 [Homo sapiens]


HG1014869
7770185:7770184
gi|7770185|gb|AAF69628.1| PRO2281 [Homo sapiens]


HG1014870
proteinkinase320A:protein-
gi|38327632|ref|NP_001945.3| discoidin receptor tyrosine kinase isoform b; PTK3A protein tyrosine



kinase320B
kinase 3A; cell adhesion kinase; epithelial discoidin domain receptor 1; neurotrophic tyrosine




kinase, receptor, type 4; neuroepithelial tyrosine kinase; mammarian carcinoma kinase 10 [Homo





sapiens]



HG1014871
307091:186775
gi|120749|sp|P16422|TTD1_HUMAN Tumor-associated calcium signal transducer 1 precursor




(Major gastrointestinal tumor-associated protein GA733-2) (Epithelial cell surface antigen)




(Epithelial glycoprotein) (EGP) (Adenocarcinoma-associated antigen) (KSA) (KS 1/4 antigen) (Cell




surface glycoprotein Trop-1)


HG1014872
31417919:12803236
gi|31417919|gb|AAH02431.2| B4GALT2 protein [Homo sapiens]


HG1014873
1160925:1160924
gi|38327632|ref|NP_001945.3| discoidin receptor tyrosine kinase isoform b; PTK3A protein tyrosine




kinase 3A; cell adhesion kinase; epithelial discoidin domain receptor 1; neurotrophic tyrosine




kinase, receptor, type 4; neuroepithelial tyrosine kinase; mammarian.carcinoma kinase 10 [Homo





sapiens]



HG1014874
179435:179434
gi|86965|pir||JH0395 biliary glycoprotein h precursor - human


HG1014875
219497:219496
gi|86964|pir||JH0394 biliary glycoprotein g precursor - human


HG1014876
2554610:2554609
gi|7428837|pir||JC5667 multidrug resistance protein, short type - human


HG1014877
29387396:29387395
gi|29387396|gb|AAH48416.1| PTPRF protein [Homo sapiens]


HG1014878
29421204:29421203
gi|29421204|dbj|BAB13462.2| KIAA1636 protein [Homo sapiens]


HG1014879
29476766:29476765
gi|29476766|gb|AAH50037.1| KIAA0450 protein [Homo sapiens]


HG1014880
29792320:29792319
gi|29792320|gb|AAH50744.1| Unknown (protein for IMAGE: 6091533) [Homo sapiens]


HG1014881
30046456:30046455
gi|30046456|gb|AAH50370.1| ABCC3 protein [Homo sapiens]


HG1014882
30046796:30046795
gi|30046796|gb|AAH50585.1| ITGA6 protein [Homo sapiens]


HG1014883
30313820:30313819
gi|30313820|gb|AAO49801.1| ATP-binding cassette C5 splicing variant A [Homo sapiens]


HG1014884
31323051:31323050
gi|31323051|gb|AAP44001.1| hepatocyte growth factor activator inhibitor 1B [Homo sapiens]


HG1014885
31873230:31873229
gi|31873230|emb|CAD97607.1| hypothetical protein [Homo sapiens]


HG1014886
32812254:32812253
gi|33186910|ref|NP_874365.1| scribble isoform N1 [Homo sapiens]


HG1014887
32966069:32966068
gi|32966069|gb|AAP92131.1| CD39L2 nucleotidase [Homo sapiens]


HG1014888
5825553:5825552
gi|12643871|sp|Q9UBM1|PEMT_HUMAN Phosphatidylethanolamine N-methyltransferase




(PEAMT) (PEMT) (PEMT2)


HG1014889
11282038:6808452
gi|11282038|pir||T46511 hypothetical protein DKFZp586M2424.1 - human (fragment)


HG1014890
20138797:2605944
gi|20138797|sp|Q9Y219|JAG2_HUMAN Jagged 2 precursor (Jagged2) (HJ2)


HG1014891
2136054:1060894
gi|2136054|pir||A57174 protein-tyrosine kinase (BC 2.7.1.112) erk - human (fragment)


HG1014892
2168139:6013007
gi|2168139|emb|CAB09423.1| dJ105D12.1 (novel protein) [Homo sapiens]


HG1014893
25089854:3641620
gi|25089854|sp|O75976|CBPD_HUMAN Carboxypeptidase D precursor (gp180)


HG1014894
263064:33941
gi|263064|gb|AAB24829.1| integrin subunit alpha 6 [Homo sapiens]


HG1014895
32425685:12655128
Unknown (protein for IMAGE: 3140321) [Homo sapiens]


HG1014896
7442652:3550323
gi|7442652|pir||JE0336 canalicular multispecific organic anion transporter - human


HG1014897
7459693:2293520
gi|7459693|pir||JC5545 integrin beta-4 precursor, splice form E - human


HG1014898
86966:219500
gi|86966|pir||JH0396 biliary glycoprotein i precursor - human


HG1014899
8928547:5685863
gi|8928547|sp|O15440|MRP5_HUMAN Multidrug resistance-associated protein 5 (Multi-specific




organic anion tranporter-C) (MOAT-C) (pABC11) (SMRP)


HG1014900
NP_857593.1:NM_181642
gi|32313599|ref|NP_857593.1| hepatocyte growth factor activator inhibitor 1 isoform 1 precursor;




hepatocyte growth factor activator inhibitor 1; Kunitz-type protease inhibitor 1 [Homo sapiens]
















TABLE 3







Protein Characteristics





















Alternate Mature








Predicted Protein


Protein


FP ID
Classification
Length
Tree Vote
Mature Protein Coords
Coords
Signal Peptide Coords
TM
TM Coords
non-TM Coords



















HG1014563
STM TypeI_membrane
456
0
(1-456)
(45-456)
(17-44)
2
(21-43)(425-447)
(1-20)(44-424)(448-456)


HG1014564
KINASE STM
1055
0.01
(19-1055)
(22-1055)
(1-21)
1
(543-565)
(1-542)(566-1055)


HG1014566
MTM
267
0
(1-267)


4
(55-77)(133-155)
(1-54)(78-132)(156-188)










(189-211)(226-245)
(212-225)(246-267)


HG1014568
PDE
393
0.96
(32-393)
(33-393)
(1-32)
1
(7-29)
(1-6)(30-393)


HG1014569
TypeI_membrane STM
464
0
(35-464)
(36-464)
(1-35)
1
(430-452)
(1-429)(453-464)


HG1014570
MTM
580
0.02
(1-580)


9
(63-85)(119-136)
(1-62)(86-118)(137-140)










(141-163)(167-186)
(164-166)(187-206)










(207-229)(244-263)
(230-243)(264-314)










(315-337)(357-376)
(338-356)(377-396)










(397-419)
(420-580)


HG1014572
TypeI_membrane STM
526
0
(35-526)
(36-526)
(1-35)
1
(433-455)
(1-432)(456-526)


HG1014573
MTM PHOSPHATASE
288
0.19
(20-288)
(25-288)
(1-24)
6
(5-27)(56-78)(91-113)
(1-4)(28-55)(79-90)(114-162)










(163-185)(198-215)
(186-197)(216-224)










(225-247)
(248-288)


HG1014574
KINASE STM
509
0
(18-509)
(1-509)

1
(124-146)
(1-123)(147-509)


HG1014575

732
0.04
(1-732)


8
(275-297)(312-334)
(1-274)(298-311)(335-346)










(347-369)(399-421)
(370-398)(422-487)










(488-505)(543-565)
(506-542)(566-618)










(619-641)(656-678)
(642-655)(679-732)


HG1014578
STM TypeI_membrane
1117
0.01
(23-1117)

(1-22)
2
(7-29)(612-634)
(1-6)(30-611)(635-1117)


HG1014579
SECRETED
470
1
(17-470)
(19-470)
(1-18)
0

(1-470)



PROTEASE


HG1014580
MTM
336
0.14
(38-336)

(17-37)
5
(20-42)(135-157)
(1-19)(43-134)(158-177)










(178-200)(210-232)
(201-209)(233-244)










(245-267)
(268-336)


HG1014581
STM
1029
0
(1-1029)


1
(950-972)
(1-949)(973-1029)


HG1014582
MTM
485
0.01
(1-485)


3
(34-56)(61-83)(152-174)
(1-33)(57-60)(84-151)











(175-485)


HG1014583
STM
118
0
(1-118)


1
(96-115)
(1-95)(116-118)



TypeIV_membrane


HG1014584
MTM
438
0
(1-438)


7
(43-65)(96-115)(128-147)
(1-42)(66-95)(116-127)










(167-189)(201-223)
(148-166)(190-200)










(284-306)(360-382)
(224-283)(307-359)











(383-438)


HG1014585

134
0.32
(1-134)
(37-134)
(8-36)
1
(20-42)
(1-19)(43-134)


HG1014586
MTM
370
0.22
(1-370)
(32-370)
(1-31)
4
(20-42)(54-76)(126-148)
(1-19)(43-53)(77-125)










(339-361)
(149-338)(362-370)


HG1014587
STM
768
0
(1-768)


1
(715-737)
(1-714)(738-768)


HG1014589
STM
1805
0
(1-1805)


2
(1005-1027)(1040-1062)
(1-1004)(1028-1039)











(1063-1805)


HG1014590
STM TypeI_membrane
1871
0.99
(1-1871)
(18-1871)
(1-17)
0

(1-1871)


HG1014591
PHOSPHATASE STM
1897
0.01
(20-1897)

(1-19)
1
(1252-1274)
(1-1251)(1275-1897)



TypeI_membrane


HG1014593
STM
1214
0
(36-1214)
(40-1214)
(16-39)
1
(1145-1167)
(1-1144)(1168-1214)


HG1014595
MTM
510
0
(1-510)


5
(37-56)(63-85)(100-122)
(1-36)(57-62)(86-99)










(134-153)(168-190)
(123-133)(154-167)











(191-510)


HG1014597

913
0
(21-913)

(1-20)
1
(417-439)
(1-416)(440-913)


HG1014600
MTM
383
0.06
(19-383)
(17-383)
(2-16)
9
(65-87)(99-118)(160-182)
(1-64)(88-98)(119-159)










(187-206)(216-233)
(183-186)(207-215)










(245-267)(282-304)
(234-244)(268-281)










(309-331)(336-358)
(305-308)(332-335)











(359-383)


HG1014601
INTRACELLULAR
2025
0.01
(1-2025)


0

(1-2025)



UB_ligase


HG1014602
SECRETED
1254
0.86
(23-1254)
(28-1254)
(1-27)
1
(7-25)
(1-6)(26-1254)


HG1014603
TypeI_membrane STM
1380
0
(30-1380)
(33-1380)
(1-32)
2
(13-32)(1300-1322)
(1-12)(33-1299)(1323-1380)



PROTEASE


HG1014604

368
0.11
(1-368)
(40-368)
(15-39)
0

(1-368)


HG1014605

760
0.92
(29-760)
(19-760)
(1-18)
1
(7-29)
(1-6)(30-760)


HG1014606
MTM
532
0.04
(35-532)
(1-532)

10
(7-29)(109-128)(149-171)
(1-6)(30-108)(129-148)










(198-220)(241-263)
(172-197)(221-240)










(338-360)(367-386)
(264-337)(361-366)










(433-455)(467-489)
(387-432)(456-466)










(499-521)
(490-498)(522-532)


HG1014607
KINASE STM
913
0
(21-913)

(1-20)
1
(417-439)
(1-416)(440-913)


HG1014608
MTM
209
0.33
(27-209)
(25-209)
(9-24)
4
(12-34)(77-99)(119-141)
(1-11)(35-76)(100-118)










(161-183)
(142-160)(184-209)


HG1014609
MTM
217
0.47
(29-217)
(26-217)
(11-25)
4
(5-27)(77-99)(123-145)
(1-4)(28-76)(100-122)










(160-182)
(146-159)(183-217)


HG1014610
STM TypeII_membrane
836
0
(1-836)


1
(42-64)
(1-41)(65-836)


HG1014611
PHOSPHATASE
484
0
(1-484)


1
(38-60)
(1-37)(61-484)



TypeII_membrane STM


HG1014612
STM TypeI_membrane
201
0
(21-201)
(20-201)
(1-19)
2
(4-23)(169-191)
(1-3)(24-168)(192-201)


HG1014613
INTRACELLULAR
448
0.01
(1-448)


0

(1-448)


HG1014614
MTM
199
0
(1-199)


4
(13-35)(45-67)(88-110)
(1-12)(36-44)(68-87)










(157-179)
(111-156)(180-199)


HG1014615
KINASE STM
998
0
(38-998)
(36-998)
(1-35)
1
(560-582)
(1-559)(583-998)


HG1014616
MTM
625
0.01
(1-625)


9
(263-285)(329-351)
(1-262)(286-328)(352-360)










(361-383)(396-418)
(384-395)(419-432)










(433-455)(483-505)
(456-482)(506-514)










(515-537)(550-572)
(538-549)(573-586)










(587-609)
(610-625)


HG1014617
STM
280
0.02
(1-280)
(28-280)
(8-27)
0

(1-280)


HG1014618

758
0.03
(1-758)


5
(123-145)(160-182)
(1-122)(146-159)(183-194)










(195-214)(249-271)
(215-248)(272-277)










(278-300)
(301-758)


HG1014619
MTM
1437
0.01
(1-1437)


11
(179-201)(216-238)
(1-178)(202-215)(239-292)










(293-315)(320-342)
(316-319)(343-395)










(396-418)(428-447)
(419-427)(448-856)










(857-879)(914-936)
(880-913)(937-992)










(993-1010)
(1011-1013)(1037-1096)










(1014-1036)
(1120-1437)










(1097-1119)


HG1014620
SECRETED
707
0.96
(20-707)

(1-19)
0

(1-707)



PROTEASE


HG1014621

541
0.01
(1-541)


9
(53-75)(95-117)(130-152)
(1-52)(76-94)(118-129)










(228-245)(265-287)
(153-227)(246-264)










(302-324)(337-359)
(288-301)(325-336)










(379-401)(414-436)
(360-378)(402-413)











(437-541)


HG1014622
STM TypeI_membrane
981
0
(29-981)
(26-981)
(1-25)
1
(860-882)
(1-859)(883-981)


HG1014623
TypeI_membrane STM
252
0
(28-252)

(1-27)
1
(199-221)
(1-198)(222-252)


HG1014624
STM
1073
0
(19-1073)
(23-1073)
(1-22)
1
(1015-1037)
(1-1014)(1038-1073)


HG1014625
STM
420
0.02
(32-420)

(17-31)
1
(354-376)
(1-353)(377-420)


HG1014626
STM TypeI_membrane
1822
0.98
(24-1822)

(1-23)
0

(1-1822)


HG1014627
MTM
144
0.41
(21-144)
(19-144)
(1-18)
3
(7-29)(56-78)(123-142)
(1-6)(30-55)(79-122)











(143-144)


HG1014628
STM TypeII_membrane
355
0.03
(34-355)
(1-355)

4
(15-37)(76-98)(123-145)
(1-14)(38-75)(99-122)










(150-172)
(146-149)(173-355)


HG1014629
MTM
506
0.16
(19-506)
(23-506)
(1-22)
4
(279-301)(308-327)
(1-278)(302-307)(328-341)










(342-364)(482-504)
(365-481)(505-506)


HG1014630
STM
165
0.01
(1-165)


1
(89-111)
(1-88)(112-165)


HG1014631
SECRETED
513
0
(36-513)

(6-35)
2
(12-34)(450-472)
(1-11)(35-449)(473-513)


HG1014632
TypeI_membrane STM
314
0
(24-314)
(19-314)
(1-18)
1
(266-288)
(1-265)(289-314)


HG1014633
MTM
749
0.13
(21-749)
(20-749)
(1-19)
6
(318-340)(347-369)
(1-317)(341-346)(370-418)










(419-438)(651-673)
(439-650)(674-677)










(678-697)(717-739)
(698-716)(740-749)


HG1014634
MTM
427
0.01
(37-427)
(1-427)

5
(25-47)(57-79)(207-226)
(1-24)(48-56)(80-206)










(241-263)(265-287)
(227-240)(264-264)











(288-427)


HG1014635
MTM
511
0.04
(1-511)


4
(52-74)(78-100)(171-190)
(1-51)(75-77)(101-170)










(200-217)
(191-199)(218-511)


HG1014636
MTM
220
0
(24-220)
(1-220)

4
(7-29)(78-100)(121-143)
(1-6)(30-77)(101-120)










(163-185)
(144-162)(186-220)


HG1014637
STM TypeII_membrane
373
0.99
(28-373)

(9-27)
1
(13-35)
(1-12)(36-373)


HG1014638
INTRACELLULAR
1630
0
(1-1630)


0

(1-1630)


HG1014639
STM TypeI_membrane
616
0
(25-616)
(27-616)
(1-26)
1
(209-231)
(1-208)(232-616)


HG1014640
PROTEASE STM
824
0
(20-824)
(19-824)
(1-18)
1
(656-678)
(1-655)(679-824)



TypeI_membrane


HG1014641
PROTEASE STM
775
0
(18-775)

(1-17)
1
(664-686)
(1-663)(687-775)



TypeI_membrane


HG1014642
STM TypeII_membrane
478
0
(27-478)
(23-478)
(1-22)
2
(7-29)(434-456)
(1-6)(30-433)(457-478)


HG1014643
STM TypeI_membrane
146
0
(31-146)
(33-146)
(1-32)
1
(109-126)
(1-108)(127-146)


HG1014644
MTM
687
0.07
(26-687)
(27-687)
(1-26)
7
(406-428)(441-463)
(1-405)(429-440)(464-472)










(473-495)(508-530)
(496-507)(531-568)










(569-591)(603-625)
(592-602)(626-630)










(631-653)
(654-687)


HG1014645
STM TypeI_membrane
1238
0.01
(27-1238)

(4-26)
1
(1083-1105)
(1-1082)(1106-1238)


HG1014646
STM TypeII_membrane
344
0.98
(28-344)
(32-344)
(1-31)
1
(13-35)
(1-12)(36-344)


HG1014647
INTRACELLULAR
2013
0
(1-2013)


0

(1-2013)


HG1014692
PROTEASE STM
540
1
(18-540)

(1-17)
0

(1-540)



TypeI_membrane


HG1014693
PROTEASE STM
775
0
(18-775)

(1-17)
1
(664-686)
(1-663)(687-775)



TypeI_membrane


HG1014694
MTM
393
0.02
(1-393)


4
(166-188)(195-214)
(1-165)(189-194)(215-228)










(229-251)(369-391)
(252-368)


HG1014695
MTM
361
0
(1-361)


4
(134-156)(163-182)
(1-133)(157-162)(183-196)










(197-219)(337-359)
(220-336)(360-361)


HG1014696
MTM
393
0.02
(1-393)


4
(166-188)(195-214)
(1-165)(189-194)(215-228)










(229-251)(369-391)
(252-368)(392-393)


HG1014697
MTM
526
0
(29-526)
(1-526)

10
(13-35)(103-122)
(1-12)(36-102)(123-142)










(143-165)(192-214)
(166-191)(215-234)










(235-257)(332-354)
(258-331)(355-360)










(361-380)(427-449)
(381-426)(450-460)










(461-483)(493-515)
(484-492)(516-526)


HG1014698
MTM
147
0.02
(1-147)


0

(1-147)


HG1014699
INTRACELLULAR
279
0
(24-279)
(1-279)

2
(226-245)(252-274)
(1-225)(246-251)(275-279)


HG1014700
STM TypeII_membrane
136
0.98
(28-136)

(9-27)
1
(13-35)
(1-12)(36-136)


HG1014701
MTM
355
0
(1-355)


8
(37-59)(69-88)(158-177)
(1-36)(60-68)(89-157)










(187-205)(217-239)
(178-186)(206-216)










(254-276)(281-303)
(240-253)(277-280)










(308-330)
(304-307)(331-355)


HG1014702
INTRACELLULAR
374
0.27
(32-374)
(34-374)
(1-33)
0

(1-374)


HG1014703
INTRACELLULAR
358
0
(1-358)
(48-358)
(19-47)
0

(1-358)



UB_ligase


HG1014704
MTM
528
0.05
(1-528)


0

(1-528)


HG1014705
INTRACELLULAR
1101
0.03
(1-1101)


0

(1-1101)


HG1014706
INTRACELLULAR
2863
0
(1-2863)


0

(1-2863)


HG1014707
KINASE STM
998
0
(38-998)
(36-998)
(1-35)
1
(560-582)
(1-559)(583-998)



TypeI_membrane



pkinase_EphB3


HG1014708
INTRACELLULAR
1630
0
(1-1630)


0

(1-1630)


HG1014709
INTRACELLULAR
1806
0.21
(36-1806)
(35-1806)
(1-34)
0

(1-1806)


HG1014710
PHOSPHATASE STM
1888
0.01
(20-1888)

(1-19)
1
(1243-1265)
(1-1242)(1266-1888)



TypeI_membrane


HG1014711
MTM
693
0.07
(26-693)
(27-693)
(1-26)
7
(405-427)(447-469)
(1-404)(428-446)(470-478)










(479-501)(514-536)
(502-513)(537-574)










(575-597)(609-631)
(598-608)(632-636)










(637-659)
(660-693)


HG1014712
STM TypeI_membrane
456
0
(1-456)
(45-456)
(17-44)
2
(21-43)(425-447)
(1-20)(44-424)(448-456)


HG1014713
KINASE STM
987
0.01
(19-987)
(22-987)
(1-21)
1
(543-565)
(1-542)(566-987)



TypeI_membrane



pkinase_EphB2


HG1014714
STM TypeI_membrane
1200
0.01
(27-1200)

(4-26)
1
(1045-1067)
(1-1044)(1068-1200)


HG1014715
TypeI_membrane STM
1380
0
(30-1380)
(33-1380)
(1-32)
1
(1300-1322)
(1-1299)(1323-1380)



PROTEASE


HG1014716
MTM
236
0.01
(1-236)


4
(41-63)(83-105)(126-148)
(1-40)(64-82)(106-125)










(194-216)
(149-193)(217-236)


HG1014717
MTM
199
0
(1-199)


4
(13-35)(45-67)(88-110)
(1-12)(36-44)(68-87)










(157-179)
(111-156)(180-199)


HG1014718
INTRACELLULAR
1811
0.53
(15-1811)

(1-14)
0

(1-1811)


HG1014719
MTM PHOSPHATASE
232
0
(16-232)
(1-232)

5
(4-23)(35-57)(107-129)
(1-3)(24-34)(58-106)










(142-159)(169-191)
(130-141)(160-168)











(192-232)


HG1014720
MTM PHOSPHATASE
309
0.01
(1-309)


5
(77-99)(112-134)
(1-76)(100-111)(135-183)










(184-206)(219-236)
(207-218)(237-245)










(246-268)
(269-309)


HG1014721
STM TypeII_membrane
372
0.99
(28-372)

(9-27)
1
(13-35)
(1-12)(36-372)


HG1014722
STM TypeII_membrane
1464
0.99
(23-1464)

(1-22)
0

(1-1464)


HG1014723
STM
1215
0
(20-1215)

(1-19)
1
(1146-1168)
(1-1145)(1169-1215)


HG1014724
PHOSPHATASE
484
0
(1-484)


1
(38-60)
(1-37)(61-484)



TypeII_membrane STM


HG1014725
MTM
506
0.16
(19-506)
(23-506)
(1-22)
4
(279-301)(308-327)
(1-278)(302-307)(328-341)










(342-364)(482-504)
(365-481)(505-506)


HG1014726
INTRACELLULAR
1128
0.03
(1-1128)


0

(1-1128)


HG1014727
STM
273
0.7
(1-273)
(31-273)
(15-30)
0

(1-273)


HG1014728
KINASE STM
913
0
(21-913)

(1-20)
1
(417-439)
(1-416)(440-913)



TypeI_membrane



pkinase_DDR1


HG1014729
KINASE STM
919
0
(21-919)

(1-20)
1
(417-439)
(1-416)(440-919)



TypeI_membrane



pkinase_DDR1


HG1014730
SECRETED
1405
0.01
(1-1405)


0

(1-1405)


HG1014731
PDE
331
0.96
(32-331)
(33-331)
(1-32)
1
(7-29)
(1-6)(30-331)


HG1014732
MTM
842
0
(1-842)


9
(27-49)(70-92)(105-127)
(1-26)(50-69)(93-104)










(147-169)(184-206)
(128-146)(170-183)










(383-405)(409-431)
(207-382)(406-408)










(502-521)(531-548)
(432-501)(522-530)











(549-842)


HG1014733
MTM
1527
0.01
(1-1527)


14
(37-56)(63-85)(100-122)
(1-36)(57-62)(86-99)










(134-153)(168-190)
(123-133)(154-167)










(303-325)(345-367)
(191-302)(326-344)










(423-445)(449-471)
(368-422)(446-448)










(535-557)(970-992)
(472-534)(558-969)










(1012-1034)
(993-1011)(1035-1102)










(1103-1125)
(1126-1193)(1217-1527)










(1194-1216)


HG1014734
MTM
1238
0.01
(1-1238)


13
(37-56)(63-85)(100-122)
(1-36)(57-62)(86-99)










(134-153)(168-190)
(123-133)(154-167)










(303-325)(345-367)
(191-302)(326-344)










(423-445)(449-471)
(368-422)(446-448)










(535-557)(970-992)
(472-534)(558-969)










(1012-1034)
(993-1011)(1035-1102)










(1103-1125)
(1126-1238)


HG1014735
INTRACELLULAR
947
0
(1-947)


0

(1-947)


HG1014736
INTRACELLULAR
774
0.52
(15-774)

(1-14)
0

(1-774)


HG1014737
MTM
528
0.05
(1-528)


0

(1-528)


HG1014738
SECRETED
707
0.96
(20-707)

(1-19)
0

(1-707)



PROTEASE


HG1014739
STM
309
0.71
(1-309)
(31-309)
(15-30)
0

(1-309)


HG1014740
STM
93
0.1
(1-93)
(19-93)
(1-18)
0

(1-93)


HG1014741
MTM
896
0.02
(1-896)


9
(81-103)(124-146)
(1-80)(104-123)(147-158)










(159-181)(201-223)
(182-200)(224-237)










(238-260)(437-459)
(261-436)(460-462)










(463-485)(556-575)
(486-555)(576-584)










(585-602)
(603-896)


HG1014742
MTM
283
0
(1-283)


5
(81-103)(124-146)
(1-80)(104-123)(147-158)










(159-181)(201-223)
(182-200)(224-237)










(238-260)
(261-283)


HG1014743
INTRACELLULAR
337
0.01
(1-337)


0

(1-337)


HG1014744
STM TypeII_membrane
344
0.98
(28-344)
(32-344)
(1-31)
1
(13-35)
(1-12)(36-344)


HG1014745
KINASE STM
552
0
(1-552)


1
(106-128)
(1-105)(129-552)



TypeI_membrane



pkinase_EphB2


HG1014746
KINASE STM
621
0
(1-621)


1
(106-128)
(1-105)(129-621)



TypeI_membrane



pkinase_EphB2


HG1014747
MTM
236
0.01
(1-236)


4
(41-63)(83-105)(126-148)
(1-40)(64-82)(106-125)










(194-216)
(149-193)(217-236)


HG1014748
STM
74
0.58
(23-74)
(31-74)
(15-30)
1
(10-32)
(1-9)(33-74)


HG1014749
INTRACELLULAR
59
0.04
(1-59)
(25-59)
(1-24)
0

(1-59)


HG1014750
STM TypeII_membrane
562
0
(1-562)


0

(1-562)


HG1014751
MTM
433
0
(1-433)


7
(38-60)(91-110)(123-142)
(1-37)(61-90)(111-122)










(162-184)(196-218)
(143-161)(185-195)










(279-301)(355-377)
(219-278)(302-354)











(378-433)


HG1014752
STM TypeII_membrane
344
0.98
(28-344)
(32-344)
(1-31)
1
(13-35)
(1-12)(36-344)


HG1014753
SECRETED
186
0.07
(1-186)
(17-186)
(3-16)
0

(1-186)


HG1014754
SECRETED
186
0.07
(1-186)
(17-186)
(3-16)
0

(1-186)


HG1014755
KINASE STM
82
0.92
(9-82)
(19-82)
(4-18)
0

(1-82)



TypeI_membrane



pkinase_DDR1


HG1014756
KINASE STM
62
0.91
(9-62)
(19-62)
(4-18)
0

(1-62)



TypeI_membrane



pkinase_DDR1


HG1014757
MTM
39
0.26
(8-39)
(29-39)
(11-28)
1
(5-27)
(1-4)(28-39)


HG1014758
INTRACELLULAR
1308
0.04
(1-1308)


0

(1-1308)


HG1014759
TypeI_membrane STM
252
0.01
(28-252)

(1-27)
1
(199-221)
(1-198)(222-252)


HG1014760
MTM
382
0
(11-382)
(1-382)

4
(52-71)(284-306)
(1-51)(72-283)(307-310)










(311-330)(350-372)
(331-349)(373-382)


HG1014761
PROTEASE
714
0
(17-714)
(1-714)

0

(1-714)



INTRACELLULAR


HG1014762
INTRACELLULAR
453
0
(1-453)


0

(1-453)


HG1014763
STM
705
0
(1-705)


1
(626-648)
(1-625)(649-705)


HG1014764
INTRACELLULAR
1729
0
(1-1729)


0

(1-1729)


HG1014765
KINASE STM
108
0.15
(24-108)
(27-108)
(11-26)
0

(1-108)



TypeI_membrane



pkinase_EphB2


HG1014766
MTM
427
0.01
(37-427)
(1-427)

5
(25-47)(57-79)(207226)
(1-24)(48-56)(80-206)










(241-263)(265-287)
(227-240)(264-264)











(288-427)


HG1014767
INTRACELLULAR
24
0.01
(1-24)
(18-24)
(1-17)
0

(1-24)


HG1014768
STM
83
0
(1-83)
(17-83)
(2-16)
0

(1-83)



TypeIV_membrane


HG1014769
MTM
1514
0
(1-1514)


14
(37-56)(63-85)(100-122)
(1-36)(57-62)(86-99)










(134-153)(168-190)
(123-133)(154-167)










(303-325)(345-367)
(191-302)(326-344)










(423-445)(449-471)
(368-422)(446-448)










(535-557)(970-992)
(472-534)(558-969)










(1012-1034)
(993-1011)(1035-1102)










(1103-1125)
(1126-1193)(1217-1514)










(1194-1216)


HG1014770
TypeI_membrane STM
468
0
(35-468)
(36-468)
(1-35)
1
(433-455)
(1-432)(456-468)


HG1014771
INTRACELLULAR
835
0.01
(1-835)


0

(1-835)


HG1014772
MTM
49
0
(1-49)


0

(1-49)


HG1014773
INTRACELLULAR
1715
0
(1-1715)


0

(1-1715)



UB_ligase


HG1014774
MTM
766
0
(1-766)


7
(74-96)(117-139)
(1-73)(97-116)(140-183)










(184-206)(307-329)
(207-306)(330-332)










(333-355)(426-445)
(356-425)(446-454)










(455-472)
(473-766)


HG1014775
SECRETED
240
0
(1-240)


0

(1-240)



PROTEASE


HG1014776
MTM
505
0.16
(19-505)
(23-505)
(1-22)
4
(278-300)(307-326)
(1-277)(301-306)(327-340)










(341-363)(481-503)
(364-480)(504-505)


HG1014777
STM TypeII_membrane
66
0
(1-66)


0

(1-66)


HG1014778
STM TypeII_membrane
41
0.02
(1-41)
(34-41)
(2-33)
0

(1-41)


HG1014779
STM TypeII_membrane
60
0
(1-60)


0

(1-60)


HG1014780
INTRACELLULAR
117
0
(1-117)


0

(1-117)


HG1014781
INTRACELLULAR
716
0
(1-716)


0

(1-716)


HG1014782
INTRACELLULAR
656
0.03
(1-656)


0

(1-656)


HG1014783
STM TypeII_membrane
1069
1
(23-1069)

(1-22)
0

(1-1069)


HG1014784
PHOSPHATASE
483
0
(1-483)


1
(37-59)
(1-36)(60-483)



TypeII_membrane STM


HG1014785
STM TypeII_membrane
837
0
(1-837)


1
(42-64)
(1-41)(65-837)


HG1014786
INTRACELLULAR
2147
0.02
(27-2147)
(1-2147)

0

(1-2147)


HG1014787
INTRACELLULAR
1844
0.01
(1-1844)


0

(1-1844)


HG1014788
MTM
552
0.02
(1-552)


9
(35-57)(91-108)(113-135)
(1-34)(58-90)(109-112)










(139-158)(179-201)
(136-138)(159-178)










(216-235)(287-309)
(202-215)(236-286)










(329-348)(369-391)
(310-328)(349-368)











(392-552)


HG1014789
STM TypeI_membrane
439
0
(26-439)
(27-439)
(1-26)
2
(12-34)(408-430)
(1-11)(35-407)(431-439)


HG1014790
INTRACELLULAR
2851
0
(1-2851)


0

(1-2851)


HG1014791
STM TypeI_membrane
971
0
(29-971)
(26-971)
(1-25)
1
(850-872)
(1-849)(873-971)


HG1014792
PHOSPHATASE
503
0
(1-503)


1
(57-79)
(1-56)(80-503)



TypeII_membrane STM


HG1014793
INTRACELLULAR
625
0
(1-625)


0

(1-625)


HG1014794
INTRACELLULAR
399
0.06
(1-399)
(37-399)
(14-36)
0

(1-399)


HG1014795
INTRACELLULAR
391
0.02
(1-391)


0

(1-391)


HG1014796
STM
657
0
(1-657)


0

(1-657)


HG1014797
MTM
693
0.07
(26-693)
(27-693)
(1-26)
7
(405-427)(447-469)
(1-404)(428-446)(470-478)










(479-501)(514-536)
(502-513)(537-574)










(575-597)(609-631)
(598-608)(632-636)










(637-659)
(660-693)


HG1014798
TypeI_membrane STM
461
0
(35-461)
(36-461)
(1-35)
1
(368-390)
(1-367)(391-461)


HG1014799
MTM
364
0
(1-364)


0

(1-364)


HG1014800
STM TypeI_membrane
1238
0.01
(27-1238)

(4-26)
1
(1083-1105)
(1-1082)(1106-1238)


HG1014801
STM
629
0
(37-629)
(36-629)
(1-35)
1
(576-598)
(1-575)(599-629)


HG1014802
STM TypeII_membrane
1464
0.99
(23-1464)

(1-22)
0

(1-1464)


HG1014803
SECRETED
707
0.96
(20-707)

(1-19)
0

(1-707)



PROTEASE


HG1014804
STM TypeI_membrane
1752
0.98
(24-1752)

(1-23)
0

(1-1752)


HG1014805
STM TypeI_membrane
1822
0.98
(24-1822)

(1-23)
0

(1-1822)



TypeIV_membrane


HG1014769
MTM
1514
0
(1-1514)


14
(37-56)(63-85)(100-122)
(1-36)(57-62)(86-99)










(134-153)(168-190)
(123-133)(154-167)










(303-325)(345-367)
(191-302)(326-344)










(423-445)(449-471)
(368-422)(446-448)










(535-557)(970-992)
(472-534)(558-969)










(1012-1034)
(993-1011)(1035-1102)










(1103-1125)
(1126-1193)(1217-1514)










(1194-1216)


HG1014770
TypeI_membrane STM
468
0
(35-468)
(36-468)
(1-35)
1
(433-455)
(1-432)(456-468)


HG1014771
INTRACELLULAR
835
0.01
(1-835)


0

(1-835)


HG1014772
MTM
49
0
(1-49)


0

(1-49)


HG1014773
INTRACELLULAR
1715
0
(1-1715)


0

(1-1715)



UB_ligase


HG1014774
MTM
766
0
(1-766)


7
(74-96)(117-139)
(1-73)(97-116)(140-183)










(184-206)(307-329)
(207-306)(330-332)










(333-355)(426-445)
(356-425)(446-454)










(455-472)
(473-766)


HG1014775
SECRETED
240
0
(1-240)


0

(1-240)



PROTEASE


HG1014776
MTM
505
0.16
(19-505)
(23-505)
(1-22)
4
(278-300)(307-326)
(1-277)(301-306)(327-340)










(341-363)(481-503)
(364-480)(504-505)


HG1014777
STM TypeII_membrane
66
0
(1-66)


0

(1-66)


HG1014778
STM TypeII_membrane
41
0.02
(1-41)
(34-41)
(2-33)
0

(1-41)


HG1014779
STM TypeII_membrane
60
0
(1-60)


0

(1-60)


HG1014780
INTRACELLULAR
117
0
(1-117)


0

(1-117)


HG1014781
INTRACELLULAR
716
0
(1-716)


0

(1-716)


HG1014782
INTRACELLULAR
656
0.03
(1-656)


0

(1-656)


HG1014783
STM TypeII_membrane
1069
1
(23-1069)

(1-22)
0

(1-1069)


HG1014784
PHOSPHATASE
483
0
(1-483)


1
(37-59)
(1-36)(60-483)



TypeII_membrane STM


HG1014785
STM TypeII_membrane
837
0
(1-837)


1
(42-64)
(1-41)(65-837)


HG1014786
INTRACELLULAR
2147
0.02
(27-2147)
(1-2147)

0

(1-2147)


HG1014787
INTRACELLULAR
1844
0.01
(1-1844)


0

(1-1844)


HG1014788
MTM
552
0.02
(1-552)


9
(35-57)(91-108)(113-135)
(1-34)(58-90)(109-112)










(139-158)(179-201)
(136-138)(159-178)










(216-235)(287-309)
(202-215)(236-286)










(329-348)(369-391)
(310-328)(349-368)











(392-552)


HG1014789
STM TypeI_membrane
439
0
(26-439)
(27-439)
(1-26)
2
(12-34)(408-430)
(1-11)(35-407)(431-439)


HG1014790
INTRACELLULAR
2851
0
(1-2851)


0

(1-2851)


HG1014791
STM TypeI_membrane
971
0
(29-971)
(26-971)
(1-25)
1
(850-872)
(1-849)(873-971)


HG1014792
PHOSPHATASE
503
0
(1-503)


1
(57-79)
(1-56)(80-503)



TypeII_membrane STM


HG1014793
INTRACELLULAR
625
0
(1-625)


0

(1-625)


HG1014794
INTRACELLULAR
399
0.06
(1-399)
(37-399)
(14-36)
0

(1-399)


HG1014795
INTRACELLULAR
391
0.02
(1-391)


0

(1-391)


HG1014796
STM
657
0
(1-657)


0

(1-657)


HG1014797
MTM
693
0.07
(26-693)
(27-693)
(1-26)
7
(405-427)(447-469)
(1-404)(428-446)(470-478)










(479-501)(514-536)
(502-5 13)(537-574)










(575-597)(609-631)
(598-608)(632-636)










(637-659)
(660-693)


HG1014798
TypeI_membrane STM
461
0
(35-461)
(36-461)
(1-35)
1
(368-390)
(1-367)(391-461)


HG1014799
MTM
364
0
(1-364)


0

(1-364)


HG1014800
STM TypeI_membrane
1238
0.01
(27-1238)

(4-26)
1
(1083-1105)
(1-1082)(1106-1238)


HG1014801
STM
629
0
(37-629)
(36-629)
(1-35)
1
(576-598)
(1-575)(599-629)


HG1014802
STM TypeII_membrane
1464
0.99
(23-1464)

(1-22)
0

(1-1464)


HG1014803
SECRETED
707
0.96
(20-707)

(1-19)
0

(1-707)



PROTEASE


HG1014804
STM TypeI_membrane
1752
0.98
(24-1752)

(1-23)
0

(1-1752)


HG1014805
STM TypeI_membrane
1822
0.98
(24-1822)

(1-23)
0

(1-1822)


HG1014806
STM TypeI_membrane
1805
0.98
(24-1805)

(1-23)
0

(1-1805)


HG1014807
MTM
506
0.16
(19-506)
(23-506)
(1-22)
4
(279-301)(308-327)
(1-278)(302-307)(328-341)










(342-364)(482-504)
(365-481)(505-506)


HG1014808
STM TypeI_membrane
76
0.04
(2-76)
(30-76)
(15-29)
0

(1-76)


HG1014809
STM
147
0.02
(1-147)


1
(89-111)
(1-88)(112-147)


HG1014810
STM TypeI_membrane
1238
0
(24-1238)
(27-1238)
(1-26)
2
(7-24)(1083-1105)
(1-6)(25-1082)(1106-1238)


HG1014811
MTM
528
0.06
(1-528)


0

(1-528)


HG1014812
INTRACELLULAR
501
0.98
(23-501)
(24-501)
(1-23)
0

(1-501)


HG1014813
MTM
433
0
(1-433)


5
(48-70)(77-99)(150-169)
(1-47)(71-76)(100-149)










(382-404)(409-428)
(170-381)(405-408)











(429-433)


HG1014814
TypeI_membrane STM
252
0.09
(28-252)

(1-27)
1
(199-221)
(1-198)(222-252)


HG1014815
STM TypeI_membrane
1200
0.01
(27-1200)

(4-26)
1
(1045-1067)
(1-1044)(1068-1200)


HG1014816
INTRACELLULAR
1941
0
(1-1941)


0

(1-1941)



UB_ligase


HG1014817
STM TypeI_membrane
456
0
(1-456)
(45-456)
(17-44)
2
(21-43)(425-447)
(1-20)(44-424)(448-456)


HG1014818
STM
455
0
(31-455)
(1-455)

1
(376-398)
(1-375)(399-455)


HG1014819
STM
100
0.67
(20-100)

(2-19)
0

(1-100)


HG1014820
INTRACELLULAR
1068
0
(1-1068)


0

(1-1068)


HG1014821
INTRACELLULAR
543
0
(1-543)


0

(1-543)


HG1014822
STM TypeI_membrane
1223
0
(27-1223)
(1-1223)

1
(1068-1090)
(1-1067)(1091-1223)


HG1014823
INTRACELLULAR
1238
0
(18-1238)
(1-1238)

0

(1-1238)


HG1014824
INTRACELLULAR
459
0.01
(31-459)
(1-459)

0

(1-459)


HG1014825
MTM
94
0.44
(19-94)
(27-94)
(9-26)
2
(7-29)(55-77)
(1-6)(30-54)(78-94)


HG1014826
INTRACELLULAR
1129
0
(1-1129)


0

(1-1129)


HG1014827
INTRACELLULAR
600
0
(38-600)
(1-600)

0

(1-600)


HG1014828
INTRACELLULAR
832
0
(1-832)


0

(1-832)


HG1014829
MTM
598
0
(1-598)


9
(63-82)(89-111)(126-148)
(1-62)(83-88)(112-125)










(160-179)(194-216)
(149-159)(180-193)










(329-351)(371-393)
(217-328)(352-370)










(449-471)(475-497)
(394-448)(472-474)











(498-598)


HG1014830
TypeI_membrane STM
1380
0
(30-1380)
(33-1380)
(1-32)
1
(1300-1322)
(1-1299)(1323-1380)



PROTEASE


HG1014831
KINASE STM
347
0
(1-347)


0

(1-347)



TypeI_membrane



pkinase_EphB2


HG1014832
PHOSPHATASE STM
1898
0
(30-1898)

(11-29)
1
(1253-1275)
(1-1252)(1276-1898)



TypeI_membrane


HG1014833
TypeI_membrane STM
252
0.05
(28-252)
(34-252)
(1-33)
1
(199-221)
(1-198)(222-252)


HG1014834
PDE
119
0.04
(21-119)
(1-119)

0

(1-119)


HG1014835
STM TypeII_membrane
472
0.99
(23-472)

(1-22)
0

(1-472)


HG1014836
KINASE STM
61
0
(1-61)


0

(1-61)



TypeI_membrane



pkinase_EphB2


HG1014837
MTM
1527
0.01
(1-1527)


14
(37-56)(63-85)(100-122)
(1-36)(57-62)(86-99)










(134-153)(168-190)
(123-133)(154-167)










(303-325)(345-367)
(191-302)(326-344)










(423-445)(449-471)
(368-422)(446-448)










(535-557)(970-992)
(472-534)(558-969)










(1012-1034)
(993-1011)(1035-1102)










(1103-1125)
(1126-1193)(1217-1527)










(1194-1216)


HG1014838
TypeI_membrane STM
461
0
(35-461)
(36-461)
(1-35)
1
(368-390)
(1-367)(391-461)


HG1014839
STM TypeI_membrane
1752
0.98
(24-1752)

(1-23)
0

(1-1752)


HG1014840
STM
1067
0
(9-1067)
(17-1067)
(2-16)
1
(1009-1031)
(1-1008)(1032-1067)


HG1014841
STM TypeI_membrane
1805
0.98
(24-1805)

(1-23)
0

(1-1805)


HG1014842
STM TypeII_membrane
181
0.99
(1-181)
(23-181)
(1-22)
0

(1-181)


HG1014843
MTM
141
0
(29-141)
(1-141)

2
(7-26)(36-58)
(1-6)(27-35)(59-141)


HG1014844
TypeI_membrane STM
430
0
(35-430)
(36-430)
(1-35)
1
(337-359)
(1-336)(360-430)


HG1014845
TypeI_membrane STM
373
0.01
(1-373)


1
(339-361)
(1-338)(362-373)


HG1014846
INTRACELLULAR
890
0.02
(32-890)
(1-890)

0

(1-890)


HG1014847
STM TypeI_membrane
94
0.85
(31-94)
(33-94)
(1-32)
0

(1-94)


HG1014848
STM TypeII_membrane
284
0.05
(1-284)
(31-284)
(1-30)
0

(1-284)


HG1014849
MTM
1528
0.01
(1-1528)


14
(37-56)(63-85)(100-122)
(1-36)(57-62)(86-99)










(134-153)(168-190)
(123-133)(154-167)










(299-321)(346-368)
(191-298)(322-345)










(424-446)(450-472)
(369-423)(447-449)










(536-558)(971-993)
(473-535)(559-970)










(1013-1035)
(994-1012)(1036-1103)










(1104-1126)
(1127-1194)(1218-1528)










(1195-1217)


HG1014850
MTM
1437
0.01
(1-1437)


11
(179-201)(216-238)
(1-178)(202-215)(239-292)










(293-315)(320-342)
(316-319)(343-395)










(396-418)(428-447)
(419-427)(448-856)










(857-879)(914-936)
(880-913)(937-992)










(993-1010)
(1011-1013)(1037-1096)










(1014-1036)
(1120-1437)










(1097-1119)


HG1014851
STM TypeII_membrane
1461
0.99
(23-1461)

(1-22)
0

(1-1461)


HG1014852
MTM
1527
0.01
(1-1527)


14
(37-56)(63-85)(100-122)
(1-36)(57-62)(86-99)










(134-153)(168-190)
(123-133)(154-167)










(303-325)(345-367)
(191-302)(326-344)










(423-445)(449-471)
(368-422)(446-448)










(535-557)(970-992)
(472-534)(558-969)










(1012-1034)
(993-1011)(1035-1102)










(1103-1125)
(1126-1193)(1217-1527)










(1194-1216)


HG1014853
MTM
693
0.07
(26-693)
(27-693)
(1-26)
7
(405-427)(447-469)
(1-404)(428-446)(470-478)










(479-501)(514-536)
(502-513)(537-574)










(575-597)(609-631)
(598-608)(632-636)










(637-659)
(660-693)


HG1014854
MTM
134
0.31
(11-134)
(19-134)
(1-18)
3
(2-21)(46-68)(113-132)
(1-1)(22-45)(69-112)











(133-134)


HG1014855
KINASE STM
981
0
(15-981)
(16-981)
(1-15)
1
(538-560)
(1-537)(561-981)



TypeI_membrane



pkinase_EphB2


HG1014856
SECRETED
79
0.99
(20-79)

(1-19)
0

(1-79)



PROTEASE


HG1014857
MTM
1437
0.01
(1-1437)


11
(179-201)(216-238)
(1-178)(202-215)(239-292)










(293-315)(320-342)
(316-319)(343-395)










(396-418)(428-447)
(419-427)(448-856)










(857-879)(914-936)
(880-913)(937-992)










(993-1010)
(1011-1013)(1037-1096)










(1014-1036)
(1120-1437)










(1097-1119)


HG1014858
MTM
285
0
(1-285)


0

(1-285)


HG1014859
INTRACELLULAR
595
0
(1-595)


0

(1-595)


HG1014860
STM
1073
0
(19-1073)
(23-1073)
(1-22)
1
(1015-1037)
(1-1014)(1038-1073)


HG1014861
INTRACELLULAR
249
0
(1-249)
(48-249)
(19-47)
0

(1-249)



UB_ligase


HG1014862
TypeI_membrane STM
21
0.19
(1-21)
(19-21)
(3-18)
0

(1-21)


HG1014863
INTRACELLULAR
47
0.07
(1-47)

(19-47)
0

(1-47)



UB_ligase


HG1014864
INTRACELLULAR
161
0.03
(1-161)


0

(1-161)


HG1014865
STM TypeI_membrane
117
0.36
(16-117)
(19-117)
(1-18)
1
(80-97)
(1-79)(98-117)


HG1014866
STM
115
0.66
(23-115)
(31-115)
(15-30)
0

(1-115)


HG1014867
STM TypeII_membrane
226
0
(1-226)


0

(1-226)


HG1014868
INTRACELLULAR
2298
0.01
(1-2298)


0

(1-2298)


HG1014869
INTRACELLULAR
329
0
(1-329)


0

(1-329)


HG1014870
KINASE STM
875
0
(21-875)

(1-20)
1
(417-439)
(1-416)(440-875)



TypeI_membrane



pkinase_DDR1


HG1014871
TypeI_membrane STM
314
0
(24-314)
(19-314)
(1-18)
1
(266-288)
(1-265)(289-314)


HG1014872
STM TypeII_membrane
306
0.43
(16-306)
(19-396)
(1-18)
0

(1-306)


HG1014873
KINASE STM
876
0
(21-876)

(1-20)
1
(417-439)
(1-416)(440-876)



TypeI_membrane



pkinase_DDR1


HG1014874
TypeI_membrane STM
321
0.72
(35-321)
(36-321)
(1-35)
0

(1-321)


HG1014875
TypeI_membrane STM
417
0.76
(35-417)
(36-417)
(1-35)
0

(1-417)


HG1014876
MTM
946
0.01
(1-946)


5
(366-388)(423-445)
(1-365)(389-422)(446-501)










(502-519)(523-545)
(520-522)(546-605)










(606-628)
(629-946)


HG1014877
PHOSPHATASE STM
353
0.94
(30-353)

(11-29)
0

(1-353)



TypeI_membrane


HG1014878
INTRACELLULAR
1864
0.01
(14-1864)
(1-1864)

0

(1-1864)


HG1014879
INTRACELLULAR
501
0.01
(1-501)


0

(1-501)


HG1014880
MTM
208
0
(1-208)


0

(1-208)


HG1014881
MTM
573
0
(1-573)


9
(38-57)(64-86)(101-123)
(1-37)(58-63)(87-100)










(135-154)(169-191)
(124-134)(155-168)










(304-326)(346-368)
(192-303)(327-345)










(424-446)(450-472)
(369-423)(447-449)











(473-573)


HG1014882
STM
686
0
(1-686)


1
(628-650)
(1-627)(651-686)


HG1014883
MTM
1394
0.01
(1-1394)


11
(179-201)(216-238)
(1-178)(202-215)(239-292)










(293-315)(320-342)
(316-319)(343-395)










(396-418)(428-447)
(419-427)(448-856)










(857-879)(914-936)
(880-913)(937-996)










(997-1019)
(1020-1053)(1077-1082)










(1054-1076)
(1106-1394)











(1083-1105)


HG1014884
SECRETED
529
0
(36-529)

(6-35)
2
(12-34)(466-488)
(1-11)(35-465)(489-529)


HG1014885
PHOSPHATASE STM
1191
0
(1-1191)


1
(546-568)
(1-545)(569-1191)



TypeI_membrane


HG1014886
INTRACELLULAR
1601
0.18
(1-1601)
(38-1601)
(6-37)
0

(1-1601)


HG1014887
PHOSPHATASE
484
0
(1-484)


1
(38-60)
(1-37)(61-484)



TypeII_membrane STM


HG1014888
MTM
199
0
(1-199)


4
(13-35)(45-67)(88-110)
(1-12)(36-44)(68-87)










(157-179)
(111-156)(180-199)


HG1014889
STM TypeII_membrane
224
0
(1-224)


0

(1-224)


HG1014890
STM TypeI_membrane
1238
0.01
(27-1238)

(4-26)
1
(1083-1105)
(1-1082)(1106-1238)


HG1014891
KINASE STM
478
0
(1-478)


1
(33-55)
(1-32)(56-478)



TypeI_membrane



pkinase_EphB2


HG1014892
SECRETED
135
0.07
(38-135)
(47-135)
(15-46)
1
(25-42)
(1-24)(43-135)


HG1014893
TypeI_membrane STM
1380
0
(30-1380)
(33-1380)
(1-32)
1
(1300-1322)
(1-1299)(1323-1380)



PROTEASE


HG1014894
STM
102
0.01
(1-102)


0

(1-102)


HG1014895
INTRACELLULAR
497
0
(1-497)


0

(1-497)


HG1014896
MTM
1527
0.01
(1-1527)


14
(37-56)(63-85)(100-122)
(1-36)(57-62)(86-99)










(134-153)(168-190)
(123-133)(154-167)










(303-325)(345-367)
(191-302)(326-344)










(423-445)(449-471)
(368-422)(446-448)










(535-557)(970-992)
(472-534)(558-969)










(1012-1034)
(993-1011)(1035-1102)










(1103-1125)
(1126-1193)(1217-1527)










(1194-1216)


HG1014897
STM TypeI_membrane
964
0
(24-964)

(1-23)
1
(711-733)
(1-710)(734-964)


HG1014898
TypeI_membrane STM
351
0.76
(35-351)
(36-351)
(1-35)
0

(1-351)


HG1014899
MTM
1437
0.01
(1-1437)


11
(179-201)(216-238)
(1-178)(202-215)(239-292)










(293-315)(320-342)
(316-319)(343-395)










(396-418)(428-447)
(419-427)(448-856)










(857-879)(914-936)
(880-913)(937-992)










(993-1010)
(1011-1013)(1037-1096)










(1014-1036)
(1120-1437)










(1097-1119)


HG1014900
SECRETED
529
0
(36-529)

(6-35)
2
(12-34)(466-488)
(1-11)(35-465)(489-529)
















TABLE 4







Pfam Coordinates










FP ID
Protein ID
Pfam
Pfam Coords.





HG1014563
730241:473936
DDOST_48kD
(26-455)


HG1014564
proteinkinase98A:proteinkinase98B
EPH_lbd
(20-197)


HG1014564
proteinkinase98A:proteinkinase98B
fn3
(325-421)


HG1014564
proteinkinase98A:proteinkinase98B
fn3
(436-520)


HG1014564
proteinkinase98A:proteinkinase98B
pkinase
(621-880)


HG1014564
proteinkinase98A:proteinkinase98B
SAM
(911-975)


HG1014565
NP_006501:NM_006510
zf-C3HC4
(16-56)


HG1014565
NP_006501:NM_006510
SPRY
(368-493)


HG1014565
NP_006501:NM_006510
zf-B_box
(93-132)


HG1014566
2738927:2738926
no_pfam


HG1014567
3646130:3646129
ATP-bind
(8-248)


HG1014568
7512502:7512502_genewise
GDPD
(148-389)


HG1014568
7512502:7512502_genewise
GDPD
(70-87)


HG1014569
88918:550030
ig
(160-217)


HG1014569
88918:550030
ig
(252-301)


HG1014569
88918:550030
ig
(341-398)


HG1014570
4240243:4240242
no_pfam


HG1014571
NP_056438:NM_015623
no_pfam


HG1014572
NP_001703:NM_001712
ig
(160-217)


HG1014572
NP_001703:NM_001712
ig
(252-301)


HG1014572
NP_001703:NM_001712
ig
(341-398)


HG1014573
NP_003703:NM_003712
PAP2
(107-248)


HG1014574
proteinkinase16A:proteinkinase16B
Activin_recp
(20-107)


HG1014574
proteinkinase16A:proteinkinase16B
pkinase
(208-495)


HG1014575
602434:602433
SNF
(266-426)


HG1014575
602434:602433
SNF
(461-507)


HG1014575
602434:602433
SNF
(532-567)


HG1014575
602434:602433
SNF
(596-694)


HG1014576
NP_005177:NM_005186
Calpain_III
(365-522)


HG1014576
NP_005177:NM_005186
Peptidase_C2
(55-354)


HG1014576
NP_005177:NM_005186
efhand
(619-647)


HG1014577
3327124:3327123
ENTH
(43-162)


HG1014577
3327124:3327123
I_LWEQ
(834-1027)


HG1014578
NP_001934:NM_001943
cadherin
(163-262)


HG1014578
NP_001934:NM_001943
cadherin
(276-377)


HG1014578
NP_001934:NM_001943
cadherin
(395-489)


HG1014578
NP_001934:NM_001943
cadherin
(93-149)


HG1014579
NP_002417:NM_002426
Peptidase_M10
(102-208)


HG1014579
NP_002417:NM_002426
peptidase_M10_N
(17-96)


HG1014579
NP_002417:NM_002426
hemopexin
(288-330)


HG1014579
NP_002417:NM_002426
hemopexin
(332-375)


HG1014579
NP_002417:NM_002426
hemopexin
(380-427)


HG1014579
NP_002417:NM_002426
hemopexin
(429-470)


HG1014580
NP_002236:NM_002245
no_pfam


HG1014581
3882213:3882212
no_pfam


HG1014582
2439970:2439969
ABC_membrane
(2-202)


HG1014582
2439970:2439969
ABC_tran
(274-457)


HG1014583
NP_005859:NM_005868
SNARE
(31-93)


HG1014584
NP_005778:NM_005787
ALG3
(45-406)


HG1014585
887368:887367
EMP24_GP25L
(25-114)


HG1014586
NP_055688:NM_014873
no_pfam


HG1014587
7513004:3043577
no_pfam


HG1014588
20521660:20521659
DEAD
(1208-1418)


HG1014588
20521660:20521659
Sec63
(1699-2015)


HG1014588
20521660:20521659
DEAD
(361-580)


HG1014588
20521660:20521659
helicase_C
(664-750)


HG1014588
20521660:20521659
Sec63
(868-1177)


HG1014589
12230553:1665780
no_pfam


HG1014590
NP_059984:NM_017514
TIG
(1023-1122)


HG1014590
NP_059984:NM_017514
TIG
(1125-1200)


HG1014590
NP_059984:NM_017514
Sema
(33-471)


HG1014590
NP_059984:NM_017514
PSI
(490-540)


HG1014590
NP_059984:NM_017514
PSI
(637-684)


HG1014590
NP_059984:NM_017514
PSI
(785-838)


HG1014590
NP_059984:NM_017514
TIG
(840-933)


HG1014590
NP_059984:NM_017514
TIG
(935-1020)


HG1014591
NP_002831:NM_002840
Y_phosphatase
(1365-1596)


HG1014591
NP_002831:NM_002840
ig
(139-199)


HG1014591
NP_002831:NM_002840
Y_phosphatase
(1654-1887)


HG1014591
NP_002831:NM_002840
ig
(236-290)


HG1014591
NP_002831:NM_002840
fn3
(309-391)


HG1014591
NP_002831:NM_002840
ig
(37-99)


HG1014591
NP_002831:NM_002840
fn3
(403-490)


HG1014591
NP_002831:NM_002840
fn3
(502-584)


HG1014591
NP_002831:NM_002840
fn3
(596-686)


HG1014591
NP_002831:NM_002840
fn3
(698-799)


HG1014591
NP_002831:NM_002840
fn3
(811-894)


HG1014591
NP_002831:NM_002840
fn3
(905-990)


HG1014592
3043698:3043697
no_pfam


HG1014593
14133205:14133204
ig
(180-268)


HG1014593
14133205:14133204
ig
(315-398)


HG1014593
14133205:14133204
ig
(445-533)


HG1014593
14133205:14133204
ig
(55-142)


HG1014593
14133205:14133204
ig
(714-804)


HG1014593
14133205:14133204
ig
(851-940)


HG1014594
NP_055453:NM_014638
no_pfam


HG1014595
NP_064422:NM_020038
no_pfam


HG1014596
1580781:1580780
Beach
(1438-1715)


HG1014596
1580781:1580780
WD40
(1855-1896)


HG1014597
2136093:403386
F5_F8_type_C
(34-182)


HG1014597
2136093:403386
pkinase
(610-905)


HG1014598
NP_005119:NM_005128
Dopey_N
(2-314)


HG1014599
559330:559329
no_pfam


HG1014600
1665787:1665786
no_pfam


HG1014601
NP_003307:NM_003316
zf-C3HC4
(1957-1996)


HG1014602
NP_055098:NM_014283
no_pfam


HG1014603
21903712:22004648
DUF857
(1128-1236)


HG1014603
21903712:22004648
DUF857
(297-406)


HG1014603
21903712:22004648
Zn_carbOpept
(501-684)


HG1014603
21903712:22004648
Zn_carbOpept
(56-270)


HG1014603
21903712:22004648
DUF857
(709-818)


HG1014603
21903712:22004648
Zn_carbOpept
(931-1109)


HG1014604
403460:403459
no_pfam


HG1014605
20140021:1888315
DPPIV_N_term
(42-548)


HG1014605
20140021:1888315
Peptidase_S9
(552-629)


HG1014606
2996578:2996577
Alg6_Alg8
(25-521)


HG1014607
729008:306474
F5_F8_type_C
(34-182)


HG1014607
729008:306474
pkinase
(610-905)


HG1014608
NP_001296:NM_001305
PMP22_Claudin
(4-181)


HG1014609
NP_066192:NM_020982
PMP22_Claudin
(4-181)


HG1014610
NP_006293:NM_006302
Glyco_hydro_63
(50-836)


HG1014611
4691263:4557422
GDA1_CD39
(430-480)


HG1014611
4691263:4557422
GDA1_CD39
(93-332)


HG1014612
NP_006806:NM_006815
EMP24_GP25L
(5-201)


HG1014613
NP_036380:NM_012248
AIRS
(115-239)


HG1014613
NP_036380:NM_012248
AIRS_C
(243-418)


HG1014614
5459516:5459515
PEMT
(2-199)


HG1014615
proteinkinase99A:proteinkinase99B
fn3
(340-435)


HG1014615
proteinkinase99A:proteinkinase99B
EPH_lbd
(39-212)


HG1014615
proteinkinase99A:proteinkinase99B
fn3
(453-535)


HG1014615
proteinkinase99A:proteinkinase99B
pkinase
(633-892)


HG1014615
proteinkinase99A:proteinkinase99B
SAM
(923-987)


HG1014616
NP_055557:NM_014742
EMP70
(37-583)


HG1014617
4009517:4009516
T4_deiodinase
(11-269)


HG1014618
1220309:1220308
VKG_Carbox
(2-668)


HG1014619
NP_005679:NM_005688
ABC_tran
(1220-1403)


HG1014619
NP_005679:NM_005688
ABC_membrane
(179-447)


HG1014619
NP_005679:NM_005688
ABC_tran
(588-759)


HG1014619
NP_005679:NM_005688
ABC_membrane
(860-1147)


HG1014620
NP_004985:NM_004994
Peptidase_M10
(109-215)


HG1014620
NP_004985:NM_004994
fn2
(230-271)


HG1014620
NP_004985:NM_004994
Peptidase_M10_N
(26-103)


HG1014620
NP_004985:NM_004994
fn2
(288-329)


HG1014620
NP_004985:NM_004994
fn2
(347-388)


HG1014620
NP_004985:NM_004994
PT
(472-507)


HG1014620
NP_004985:NM_004994
hemopexin
(521-565)


HG1014620
NP_004985:NM_004994
hemopexin
(567-608)


HG1014620
NP_004985:NM_004994
hemopexin
(613-659)


HG1014620
NP_004985:NM_004994
hemopexin
(661-704)


HG1014621
1478281:1478280
SDF
(54-485)


HG1014622
NP_055759:NM_014944
cadherin
(169-258)


HG1014623
NP_066925:NM_021102
Kunitz_BPTI
(133-183)


HG1014623
NP_066925:NM_021102
Kunitz_BPTI
(38-88)


HG1014624
NP_000201:NM_000210
integrin_A
(1038-1052)


HG1014624
NP_000201:NM_000210
FG-GAP
(316-367)


HG1014624
NP_000201:NM_000210
FG-GAP
(378-422)


HG1014624
NP_000201:NM_000210
FG-GAP
(432-474)


HG1014625
NP_006661:NM_006670
LRR
(235-258)


HG1014625
NP_006661:NM_006670
LRRCT
(294-345)


HG1014625
NP_006661:NM_006670
LRRNT
(61-90)


HG1014626
NP_000204:NM_000213
fn3
(1127-1208)


HG1014626
NP_000204:NM_000213
fn3
(1220-1310)


HG1014626
NP_000204:NM_000213
fn3
(1528-1612)


HG1014626
NP_000204:NM_000213
fn3
(1641-1728)


HG1014626
NP_000204:NM_000213
integrin_B
(37-455)


HG1014626
NP_000204:NM_000213
Calx-beta
(979-1084)


HG1014627
NP_005767:NM_005776
Cornichon
(6-136)


HG1014628
3288487:3288486
Collagen
(263-290)


HG1014628
3288487:3288486
Collagen
(291-338)


HG1014629
13124728:2285960
Neur_chan_memb
(284-379)


HG1014629
13124728:2285960
Neur_chan_memb
(475-500)


HG1014629
13124728:2285960
Neur_chan_LBD
(71-277)


HG1014630
239160:239159
no_pfam


HG1014631
NP_003701:NM_003710
Kunitz_BPTI
(250-300)


HG1014631
NP_003701:NM_003710
1dl_recept_a
(317-355)


HG1014631
NP_003701:NM_003710
Kunitz_BPTI
(375-425)


HG1014632
NP_002345:NM_002354
thyroglobulin_1
(66-135)


HG1014633
NP_036451:NM_012319
Zip
(316-534)


HG1014633
NP_036451:NM_012319
Zip
(548-737)


HG1014634
NP_002241:NM_002250
SK_channel
(12-121)


HG1014634
NP_002241:NM_002250
CaMBD
(304-377)


HG1014635
3387977:3387976
ABC_membrane
(18-213)


HG1014635
3387977:3387976
ABC_tran
(285-469)


HG1014636
NP_001297:NM_001306
PMP22_Claudin
(3-180)


HG1014637
3132896:3132895
Galactosyl_T_2
(97-367)


HG1014638
20521832:20521831
PDZ
(1004-1092)


HG1014638
20521832:20521831
PDZ
(1100-1188)


HG1014638
20521832:20521831
PDZ
(728-814)


HG1014638
20521832:20521831
PDZ
(871-949)


HG1014639
NP_003830:NM_003839
TNFR_c6
(34-68)


HG1014640
NP_001100:NM_001109
Reprolysin
(200-400)


HG1014640
NP_001100:NM_001109
disintegrin
(417-492)


HG1014640
NP_001100:NM_001109
Pep_M12B_propep
(71-185)


HG1014641
NP_055080:NM_014265
Reprolysin
(204-399)


HG1014641
NP_055080:NM_014265
disintegrin
(416-491)


HG1014641
NP_055080:NM_014265
Pep_M12B_propep
(71-189)


HG1014642
NP_005497:NM_005506
CD36
(2-439)


HG1014643
NP_006685:NM_006694
JTB
(1-146)


HG1014644
4456467:4456466
GPS
(342-394)


HG1014644
4456467:4456466
7tm_2
(400-659)


HG1014645
NP_002217:NM_002226
DSL
(178-240)


HG1014645
NP_002217:NM_002226
EGF
(311-344)


HG1014645
NP_002217:NM_002226
EGF
(351-382)


HG1014645
NP_002217:NM_002226
EGF
(389-420)


HG1014645
NP_002217:NM_002226
EGF
(427-458)


HG1014645
NP_002217:NM_002226
EGF
(465-495)


HG1014645
NP_002217:NM_002226
EGF
(502-533)


HG1014645
NP_002217:NM_002226
EGF
(540-571)


HG1014645
NP_002217:NM_002226
EGF
(640-671)


HG1014645
NP_002217:NM_002226
EGF
(678-709)


HG1014645
NP_002217:NM_002226
EGF
(716-747)


HG1014645
NP_002217:NM_002226
EGF
(755-786)


HG1014645
NP_002217:NM_002226
EGF
(793-824)


HG1014645
NP_002217:NM_002226
EGF
(831-862)


HG1014646
NP_003769:NM_003778
Galactosyl_T_2
(77-344)


HG1014647
1504030:1504029
no_pfam


HG1014692
NP_068547:NM_021777
Reprolysin
(204-399)


HG1014692
NP_068547:NM_021777
disintegrin
(416-491)


HG1014692
NP_068547:NM_021777
Pep_M12B_propep
(71-189)


HG1014693
NP_068548:NM_021778
Reprolysin
(204-399)


HG1014693
NP_068548:NM_021778
disintegrin
(416-491)


HG1014693
NP_068548:NM_021778
Pep_M12B_propep
(71-189)


HG1014694
NP_068819:NM_021984
Neur_chan_LBD
(1-164)


HG1014694
NP_068819:NM_021984
Neur_chan_memb
(171-266)


HG1014694
NP_068819:NM_021984
Neur_chan_memb
(362-387)


HG1014695
NP_068822:NM_021987
Neur_chan_memb
(139-234)


HG1014695
NP_068822:NM_021987
Neur_chan_LBD
(14-132)


HG1014695
NP_068822:NM_021987
Neur_chan_memb
(330-355)


HG1014696
NP_068830:NM_021990
Neur_chan_LBD
(1-164)


HG1014696
NP_068830:NM_021990
Neur_chan_memb
(171-266)


HG1014696
NP_068830:NM_021990
Neur_chan_memb
(362-387)


HG1014697
NP_076984:NM_024079
Alg6_Alg8
(19-515)


HG1014698
NP_079327:NM_025051
no_pfam


HG1014699
NP_108648:NM_030658
no_pfam


HG1014700
NP_085076:NM_030587
no_pfam


HG1014701
NP_055954:NM_015139
no_pfam


HG1014702
NP_009197:NM_007266
ATP-bind
(24-264)


HG1014703
NP_112212:NM_030950
zf-C3HC4
(16-56)


HG1014703
NP_112212:NM_030950
zf-B_box
(93-132)


HG1014704
NP_073572:NM_022735
no_pfam


HG1014705
NP_079461:NM_025185
ank
(134-166)


HG1014705
NP_079461:NM_025185
ank
(167-199)


HG1014705
NP_079461:NM_025185
ank
(18-50)


HG1014705
NP_079461:NM_025185
ank
(200-232)


HG1014705
NP_079461:NM_025185
ank
(233-265)


HG1014705
NP_079461:NM_025185
ank
(266-298)


HG1014705
NP_079461:NM_025185
ank
(51-74)


HG1014706
NP_006717:NM_006726
Beach
(2212-2489)


HG1014706
NP_006717:NM_006726
WD40
(2629-2670)


HG1014707
NP_004434:NM_004443
fn3
(340-435)


HG1014707
NP_004434:NM_004443
EPH_lbd
(39-212)


HG1014707
NP_004434:NM_004443
fn3
(453-535)


HG1014707
NP_004434:NM_004443
pkinase
(633-892)


HG1014707
NP_004434:NM_004443
SAM
(923-987)


HG1014708
NP_056171:NM_015356
PDZ
(1004-1092)


HG1014708
NP_056171:NM_015356
PDZ
(1100-1188)


HG1014708
NP_056171:NM_015356
PDZ
(728-814)


HG1014708
NP_056171:NM_015356
PDZ
(871-949)


HG1014709
NP_001845:NM_001854
Collagen
(1039-1095)


HG1014709
NP_001845:NM_001854
Collagen
(1096-1155)


HG1014709
NP_001845:NM_001854
Collagen
(1156-1215)


HG1014709
NP_001845:NM_001854
Collagen
(1219-1278)


HG1014709
NP_001845:NM_001854
Collagen
(1279-1330)


HG1014709
NP_001845:NM_001854
Collagen
(1333-1392)


HG1014709
NP_001845:NM_001854
Collagen
(1393-1452)


HG1014709
NP_001845:NM_001854
Collagen
(1462-1521)


HG1014709
NP_001845:NM_001854
COLFI
(1593-1804)


HG1014709
NP_001845:NM_001854
TSPN
(38-229)


HG1014709
NP_001845:NM_001854
Collagen
(442-490)


HG1014709
NP_001845:NM_001854
Collagen
(528-579)


HG1014709
NP_001843:NM_001854
Collagen
(583-642)


HG1014709
NP_001845:NM_001854
Collagen
(643-702)


HG1014709
NP_001845:NM_001854
Collagen
(703-750)


HG1014709
NP_001845:NM_001854
Collagen
(751-810)


HG1014709
NP_001845:NM_001854
Collagen
(811-870)


HG1014709
NP_001845:NM_001854
Collagen
(874-933)


HG1014709
NP_001845:NM_001854
Collagen
(934-980)


HG1014709
NP_001845:NM_001854
Collagen
(982-1037)


HG1014710
NP_569707:NM_130440
Y_phosphatase
(1356-1587)


HG1014710
NP_569707:NM_130440
ig
(139-199)


HG1014710
NP_569707:NM_130440
Y_phosphatase
(1645-1878)


HG1014710
NP_569707:NM_130440
ig
(236-290)


HG1014710
NP_569707:NM_130440
fn3
(309-391)


HG1014710
NP_569707:NM_130440
ig
(37-99)


HG1014710
NP_569707:NM_130440
fn3
(403-490)


HG1014710
NP_569707:NM_130440
fn3
(502-584)


HG1014710
NP_569707:NM_130440
fn3
(596-686)


HG1014710
NP_569707:NM_130440
fn3
(698-790)


HG1014710
NP_569707:NM_130440
fn3
(802-885)


HG1014710
NP_569707:NM_130440
fn3
(896-981)


HG1014711
NP_005673:NM_005682
GPS
(342-394)


HG1014711
NP_005673:NM_005682
7tm_2
(400-665)


HG1014712
NP_005207:NM_005216
DDOST_48 kD
(26-455)


HG1014713
NP_004433:NM_004442
EPH_lbd
(20-197)


HG1014713
NP_004433:NM_004442
fn3
(325-421)


HG1014713
NP_004433:NM_004442
fn3
(436-520)


HG1014713
NP_004433:NM_004442
pkinase
(622-881)


HG1014713
NP_004433:NM_004442
SAM
(912-976)


HG1014714
NP_660142:NM_145159
DSL
(178-240)


HG1014714
NP_660142:NM_145159
EGF
(311-344)


HG1014714
NP_660142:NM_145159
EGF
(351-382)


HG1014714
NP_660142:NM_145159
EGF
(389-420)


HG1014714
NP_660142:NM_145159
EGF
(427-457)


HG1014714
NP_660142:NM_145159
EGF
(464-495)


HG1014714
NP_660142:NM_145159
EGF
(502-533)


HG1014714
NP_660142:NM_145159
EGF
(602-633)


HG1014714
NP_660142:NM_145159
EGF
(640-671)


HG1014714
NP_660142:NM_145159
EGF
(678-709)


HG1014714
NP_660142:NM_145159
EGF
(717-748)


HG1014714
NP_660142:NM_145159
EGF
(755-786)


HG1014714
NP_660142:NM_145159
EGF
(793-824)


HG1014715
NP_001295:NM_001304
DUF857
(1128-1236)


HG1014715
NP_001295:NM_001304
DUF857
(297-406)


HG1014715
NP_001295:NM_001304
Zn_carbOpept
(501-684)


HG1014715
NP_001295:NM_001304
Zn_carbOpept
(56-270)


HG1014715
NP_001295:NM_001304
DUF857
(709-818)


HG1014715
NP_001295:NM_001304
Zn_carbOpept
(931-1109)


HG1014716
NP_680477:NM_148172
PEMT
(39-236)


HG1014717
NP_680478:NM_148173
PEMT
(2-199)


HG1014718
NP_054733:NM_014014
DEAD
(146-365)


HG1014718
NP_054733:NM_014014
Sec63
(1484-1800)


HG1014718
NP_054733:NM_014014
helicase_C
(449-535)


HG1014718
NP_054733:NM_014014
Sec63
(653-962)


HG1014718
NP_054733:NM_014014
DEAD
(993-1203)


HG1014719
NP_803545:NM_177526
PAP2
(51-192)


HG1014720
NP_808211:NM_177543
PAP2
(128-269)


HG1014721
NP_003771:NM_003780
Galactosyl_T_2
(97-366)


HG1014722
NP_000079:NM_000088
Collagen
(1020-1078)


HG1014722
NP_000079:NM_000088
Collagen
(1079-1138)


HG1014722
NP_000079:NM_000088
Collagen
(109-158)


HG1014722
NP_000079:NM_000088
Collagen
(1139-1192)


HG1014722
NP_000079:NM_000088
COLFI
(1245-1463)


HG1014722
NP_000079:NM_000088
Collagen
(177-235)


HG1014722
NP_000079:NM_000088
Collagen
(236-295)


HG1014722
NP_000079:NM_000088
Collagen
(296-355)


HG1014722
NP_000079:NM_000088
Collagen
(356-415)


HG1014722
NP_000079:NM_000088
Collagen
(416-475)


HG1014722
NP_000079:NM_000088
Collagen
(476-535)


HG1014722
NP_000079:NM_000088
Collagen
(536-595)


HG1014722
NP_000079:NM_000088
Collagen
(596-655)


HG1014722
NP_000079:NM_000088
Collagen
(656-715)


HG1014722
NP_000079:NM_000088
Collagen
(716-775)


HG1014722
NP_000079:NM_000088
Collagen
(779-838)


HG1014722
NP_000079:NM_000088
Collagen
(839-898)


HG1014722
NP_000079:NM_000088
Collagen
(899-958)


HG1014722
NP_000079:NM_000088
Collagen
(959-1018)


HG1014723
NP_001533:NM_001542
ig
(160-248)


HG1014723
NP_001533:NM_001542
ig
(295-378)


HG1014723
NP_001533:NM_001542
ig
(35-122)


HG1014723
NP_001533:NM_001542
ig
(445-533)


HG1014723
NP_001533:NM_001542
ig
(714-804)


HG1014724
NP_001238:NM_001247
GDA1_CD39
(430-480)


HG1014724
NP_001238:NM_001247
GDA1_CD39
(93-332)


HG1014725
NP_004952:NM_004961
Neur_chan_memb
(284-379)


HG1014725
NP_004952:NM_004961
Neur_chan_memb
(475-500)


HG1014725
NP_004952:NM_004961
Neur_chan_LBD
(71-277)


HG1014726
NP_038464:NM_013436
no_pfam


HG1014727
NP_054644:NM_013989
T4_deiodinase
(4-262)


HG1014728
NP_054699:NM_013993
F5_F8_type_C
(34-182)


HG1014728
NP_054699:NM_013993
pkinase
(610-905)


HG1014729
NP_054700:NM_013994
F5_F8_type_C
(34-182)


HG1014729
NP_054700:NM_013994
pkinase
(610-911)


HG1014730
NP_057311:NM_016227
no_pfam


HG1014731
NP_057725:NM_016641
GDPD
(70-327)


HG1014732
NP_005680:NM_005689
ABC_membrane
(265-544)


HG1014732
NP_005680:NM_005689
ABC_tran
(616-800)


HG1014733
NP_003777:NM_003786
ABC_tran
(1316-1499)


HG1014733
NP_003777:NM_003786
ABC_membrane
(311-582)


HG1014733
NP_003777:NM_003786
ABC_tran
(654-827)


HG1014733
NP_003777:NM_003786
ABC_membrane
(971-1244)


HG1014734
NP_064421:NM_020037
ABC_membrane
(311-582)


HG1014734
NP_064421:NM_020037
ABC_tran
(654-827)


HG1014734
NP_064421:NM_020037
ABC_membrane
(971-1193)


HG1014735
10047349:10047348
ank
(854-886)


HG1014735
10047349:10047348
ank
(887-910)


HG1014736
10435899:10435898
DEAD
(146-365)


HG1014736
10435899:10435898
helicase_C
(451-535)


HG1014736
10435899:10435898
Sec63
(653-771)


HG1014737
10438061:10438060
no_pfam


HG1014738
10443048:4826835
Peptidase_M10
(109-215)


HG1014738
10443048:4826835
fn2
(230-271)


HG1014738
10443048:4826835
Peptidase_M10_N
(26-103)


HG1014738
10443048:4826835
fn2
(288-329)


HG1014738
10443048:4826835
fn2
(347-388)


HG1014738
10443048:4826835
PT
(472-507)


HG1014738
10443048:4826835
hemopexin
(521-565)


HG1014738
10443048:4826835
hemopexin
(567-608)


HG1014738
10443048:4826835
hemopexin
(613-659)


HG1014738
10443048:4826835
hemopexin
(661-704)


HG1014739
10863065:10863064
T4_deiodinase
(111-298)


HG1014739
10863065:10863064
T4_deiodinase
(4-74)


HG1014740
10863067:10863066
T4_deiodinase
(1-21)


HG1014741
11245444:11245443
ABC_membrane
(319-598)


HG1014741
11245444:11245443
ABC_tran
(670-854)


HG1014742
11245446:11245443
no_pfam


HG1014743
12082644:12082643
Beach
(1-101)


HG1014743
12082644:12082643
WD40
(241-282)


HG1014744
12275809:12275808
Galactosyl_T_2
(77-344)


HG1014745
12314010:24797104
fn3
(1-85)


HG1014745
12314010:24797104
pkinase
(187-446)


HG1014745
12314010:24797104
SAM
(477-541)


HG1014746
12314011:17975764
fn3
(1-85)


HG1014746
12314011:17975764
pkinase
(187-446)


HG1014746
12314011:17975764
SAM
(477-541)


HG1014747
12653567:12653566
PEMT
(39-236)


HG1014748
12697587:12697586
T4_deiodinase
(4-74)


HG1014749
12803155:12803154
no_pfam


HG1014750
12803915:12803914
Glyco_hydro_63
(1-562)


HG1014751
13279206:13279205
ALG3
(40-401)


HG1014752
13325454:13325453
Galactosyl_T_2
(77-344)


HG1014753
13517342:7705321
no_pfam


HG1014754
13517410:7705321
no_pfam


HG1014755
13898643:13898642
no_pfam


HG1014756
13898645:13898644
no_pfam


HG1014757
14043169:14043168
no_pfam


HG1014758
14043179:14043178
Sec63
(150-459)


HG1014758
14043179:14043178
DEAD
(490-700)


HG1014758
14043179:14043178
Sec63
(981-1297)


HG1014759
14043430:14043429
Kunitz_BPTI
(133-183)


HG1014759
14043430:14043429
Kunitz_BPTI
(38-88)


HG1014760
14249879:14243878
Zip
(1-167)


HG1014760
14249879:14249878
Zip
(181-370)


HG1014761
14250593:14250592
Calpain_III
(365-522)


HG1014761
14250593:14250592
Peptidase_C2
(55-354)


HG1014761
14250593:14250592
efhand
(619-647)


HG1014762
14550482:14550481
no_pfam


HG1014763
14602901:14602900
no_pfam


HG1014764
14724070:22042187
no_pfam


HG1014765
14726864:14726863
no_pfam


HG1014766
15029376:15029375
SK_channel
(12-121)


HG1014766
15029376:15029375
CaMBD
(304-377)


HG1014767
15214801:15214800
no_pfam


HG1014768
15214917:15214916
SNARE
(31-78)


HG1014769
15559191:9955969
ABC_tran
(1316-1486)


HG1014769
15559191:9955969
ABC_membrane
(311-582)


HG1014769
15559191:9955969
ABC_tran
(654-827)


HG1014769
15559191:9955969
ABC_membrane
(971-1244)


HG1014770
15680237:15680236
ig
(160-217)


HG1014770
15680237:15680236
ig
(252-301)


HG1014770
15680237:15680236
ig
(341-398)


HG1014771
15779135:15779134
PDZ
(209-297)


HG1014771
15779135:15779134
PDZ
(305-393)


HG1014771
15779135:15779134
PDZ
(76-154)


HG1014772
15929829:15929828
no_pfam


HG1014773
1632766:1632765
zf-C3HC4
(1647-1686)


HG1014774
16552593:16552592
ABC_membrane
(189-468)


HG1014774
16552593:16552592
ABC_tran
(540-724)


HG1014775
1688260:4505206
hemopexin
(102-145)


HG1014775
1688260:4505206
hemopexin
(150-197)


HG1014775
1688260:4505206
hemopexin
(199-240)


HG1014775
1688260:4505206
hemopexin
(58-100)


HG1014776
1747371:1747370
Neur_chan_memb
(283-378)


HG1014776
1747371:1747370
Neur_chan_memb
(474-499)


HG1014776
1747371:1747370
Neur_chan_LBD
(71-276)


HG1014777
179629:179624
Collagen
(1-51)


HG1014778
179630:22328091
Collagen
(3-38)


HG1014779
179631:179626
Collagen
(1-60)


HG1014780
18027796:18027795
no_pfam


HG1014781
18044628:18044627
PI-PLC-Y
(1-40)


HG1014781
18044628:18044627
C2
(60-152)


HG1014782
18676646:18676645
C2
(205-297)


HG1014782
18676646:18676645
PI-PLC-Y
(70-185)


HG1014783
1888409:22328091
Collagen
(1019-1069)


HG1014783
1888409:22328091
Collagen
(109-158)


HG1014783
1888409:22328091
Collagen
(177-235)


HG1014783
1888409:22328091
Collagen
(236-295)


HG1014783
1888409:22328091
Collagen
(296-355)


HG1014783
1888409:22328091
Collagen
(356-415)


HG1014783
1888409:22328091
Collagen
(416-475)


HG1014783
1888409:22328091
Collagen
(476-535)


HG1014783
1888409:22328091
Collagen
(536-595)


HG1014783
1888409:22328091
Collagen
(596-655)


HG1014783
1888409:22328091
Collagen
(656-715)


HG1014783
1888409:22328091
Collagen
(716-775)


HG1014783
1888409:22328091
Collagen
(779-838)


HG1014783
1888409:22328091
Collagen
(839-898)


HG1014783
1888409:22328091
Collagen
(899-958)


HG1014783
1888409:22328091
Collagen
(959-1018)


HG1014784
19684107:19684106
GDA1_CD39
(429-479)


HG1014784
19684107:19684106
GDA1_CD39
(92-331)


HG1014785
19913138:20130436
Glyco_hydro_63
(50-837)


HG1014786
20521698:20521697
Dopey_N
(1-163)


HG1014787
20540895:20540894
no_pfam


HG1014788
20541809:20541808
no_pfam


HG1014789
21104416:21104415
DDOST_48 kD
(9-438)


HG1014790
21434741:21434740
Beach
(2201-2478)


HG1014790
21434741:21434740
WD40
(2618-2659)


HG1014791
21706696:21706695
cadherin
(159-248)


HG1014792
21739637:21739636
GDA1_CD39
(112-351)


HG1014792
21739637:21739636
GDA1_CD39
(449-499)


HG1014793
21748877:21748876
DEAD
(471-567)


HG1014793
21748877:21748876
Sec63
(561-614)


HG1014794
21750497:21750496
AIRS_C
(194-369)


HG1014794
21750497:21750496
AIRS
(66-190)


HG1014795
21752841:21752840
AIRS_C
(186-361)


HG1014795
21752841:21752840
AIRS
(58-182)


HG1014796
21757691:21757690
ig
(367-457)


HG1014796
21757691:21757690
ig
(504-593)


HG1014796
21757691:21757690
ig
(98-186)


HG1014797
21929079:19923767
GPS
(342-394)


HG1014797
21929079:19923767
7tm_2
(400-665)


HG1014798
219495:219494
ig
(160-217)


HG1014798
219495:219494
ig
(252-301)


HG1014799
21961497:21961496
no_pfam


HG1014800
2197067:2197066
DSL
(178-240)


HG1014800
2197067:2197066
EGF
(311-344)


HG1014800
2197067:2197066
EGF
(351-382)


HG1014800
2197067:2197066
EGF
(389-420)


HG1014800
2197067:2197066
EGF
(427-458)


HG1014800
2197067:2197066
EGF
(465-495)


HG1014800
2197067:2197066
EGF
(502-533)


HG1014800
2197067:2197066
EGF
(540-571)


HG1014800
2197067:2197066
EGF
(640-671)


HG1014800
2197067:2197066
EGF
(678-709)


HG1014800
2197067:2197066
EGF
(716-747)


HG1014800
2197067:2197066
EGF
(755-786)


HG1014800
2197067:2197066
EGF
(793-824)


HG1014800
2197067:2197066
EGF
(831-862)


HG1014801
22044017:22044016
no_pfam


HG1014802
22328092:22328091
Collagen
(1019-1078)


HG1014802
22328092:22328091
Collagen
(1079-1138)


HG1014802
22328092:22328091
Collagen
(109-158)


HG1014802
22328092:22328091
Collagen
(1139-1192)


HG1014802
22328092:22328091
COLFI
(1245-1463)


HG1014802
22328092:22328091
Collagen
(177-235)


HG1014802
22328092:22328091
Collagen
(236-295)


HG1014802
22328092:22328091
Collagen
(296-355)


HG1014802
22328092:22328091
Collagen
(356-415)


HG1014802
22328092:22328091
Collagen
(416-475)


HG1014802
22328092:22328091
Collagen
(476-535)


HG1014802
22328092:22328091
Collagen
(536-595)


HG1014802
22328092:22328091
Collagen
(596-655)


HG1014802
22328092:22328091
Collagen
(656-715)


HG1014802
22328092:22328091
Collagen
(719-755)


HG1014802
22328092:22328091
Collagen
(779-838)


HG1014802
22328092:22328091
Collagen
(839-898)


HG1014802
22328092:22328091
Collagen
(899-958)


HG1014802
22328092:22328091
Collagen
(959-1018)


HG1014803
22532481:4826835
Peptidase_M10
(109-215)


HG1014803
22532481:4826835
fn2
(230-271)


HG1014803
22532481:4826835
Peptidase_M10_N
(26-103)


HG1014803
22532481:4826835
fn2
(288-329)


HG1014803
22532481:4826835
fn2
(347-388)


HG1014803
22532481:4826835
PT
(472-507)


HG1014803
22532481:4826835
hemopexin
(521-565)


HG1014803
22532481:4826835
hemopexin
(567-608)


HG1014803
22532481:4826835
hemopexin
(613-659)


HG1014803
22532481:4826835
hemopexin
(661-704)


HG1014804
2270923:33910
fn3
(1127-1208)


HG1014804
2270923:33910
fn3
(1220-1310)


HG1014804
2270923:33910
fn3
(1458-1542)


HG1014804
2270923:33910
fn3
(1571-1658)


HG1014804
2270923:33910
integrin_B
(37-455)


HG1014804
2270923:33910
Calx-beta
(979-1084)


HG1014805
2270924:21361206
fn3
(1127-1208)


HG1014805
2270924:21361206
fn3
(1220-1310)


HG1014805
2270924:21361206
fn3
(1528-1612)


HG1014805
2270924:21361206
fn3
(1641-1728)


HG1014805
2270924:21361206
integrin_B
(37-455)


HG1014805
2270924:21361206
Calx-beta
(979-1084)


HG1014806
2270925:33956
fn3
(1127-1208)


HG1014806
2270925:33956
fn3
(1220-1310)


HG1014806
2270925:33956
fn3
(1511-1595)


HG1014806
2270925:33956
fn3
(1624-1711)


HG1014806
2270925:33956
integrin_B
(37-455)


HG1014806
2270925:33956
Calx-beta
(979-1084)


HG1014807
2285958:2285960
Neur_chan_memb
(284-379)


HG1014807
2285958:2285960
Neur_chan_memb
(475-500)


HG1014807
2285958:2285960
Neur_chan_LBD
(71-277)


HG1014808
2293523:21361206
no_pfam


HG1014809
239158:239157
integrin_A
(112-126)


HG1014810
2432002:2432001
DSL
(178-240)


HG1014810
2432002:2432001
EGF
(311-344)


HG1014810
2432002:2432001
EGF
(351-382)


HG1014810
2432002:2432001
EGF
(389-420)


HG1014810
2432002:2432001
EGF
(427-458)


HG1014810
2432002:2432001
EGF
(465-495)


HG1014810
2432002:2432001
EGF
(502-533)


HG1014810
2432002:2432001
EGF
(540-571)


HG1014810
2432002:2432001
EGF
(640-671)


HG1014810
2432002:2432001
EGF
(678-709)


HG1014810
2432002:2432001
EGF
(716-747)


HG1014810
2432002:2432001
EGF
(755-786)


HG1014810
2432002:2432001
EGF
(793-824)


HG1014810
2432002:2432001
EGF
(831-862)


HG1014811
24496473:24496472
no_pfam


HG1014812
24658543:24658542
I_LWEQ
(252-445)


HG1014813
24659964:24659963
Zip
(279-431)


HG1014813
24659964:24659963
Zip
(47-265)


HG1014814
2598968:2598967
Kunitz_BPTI
(133-183)


HG1014814
2598968:2598967
Kunitz_BPTI
(38-88)


HG1014815
2605947:2605946
DSL
(178-240)


HG1014815
2605947:2605946
EGF
(311-344)


HG1014815
2605947:2605946
EGF
(351-382)


HG1014815
2605947:2605946
EGF
(389-420)


HG1014815
2605947:2605946
EGF
(427-457)


HG1014815
2605947:2605946
EGF
(464-495)


HG1014815
2605947:2505946
EGF
(502-533)


HG1014815
2605947:2605946
EGF
(602-633)


HG1014815
2605947:2605946
EGF
(640-671)


HG1014815
2605947:2605946
EGF
(678-709)


HG1014815
2605947:2605946
EGF
(717-748)


HG1014815
2605947:2605946
EGF
(755-786)


HG1014815
2605947:2605946
EGF
(793-824)


HG1014816
2662364:2687860
zf-C3HC4
(1873-1912)


HG1014817
2662375:473936
DDOST_48 kD
(26-455)


HG1014818
27477822:27477821
no_pfam


HG1014819
27480564:27480563
no_pfam


HG1014820
27499509:27499508
ENTH
(28-147)


HG1014820
27499509:27499508
I_LWEQ
(819-1012)


HG1014821
27529860:27529859
no_pfam


HG1014822
2765402:2765401
DSL
(162-224)


HG1014822
2765402:2765401
EGF
(295-328)


HG1014822
2765402:2765401
EGF
(335-366)


HG1014822
2765402:2765401
EGF
(374-405)


HG1014822
2765402:2765401
EGF
(412-443)


HG1014822
2765402:2765401
EGF
(450-480)


HG1014822
2765402:2765401
EGF
(487-518)


HG1014822
2765402:2765401
EGF
(525-556)


HG1014822
2765402:2765401
EGF
(625-656)


HG1014822
2765402:2765401
EGF
(663-694)


HG1014822
2765402:2765401
EGF
(701-732)


HG1014822
2765402:2765401
EGF
(740-771)


HG1014822
2765402:2765401
EGF
(778-809)


HG1014822
2765402:2765401
EGF
(816-847)


HG1014823
27694125:27694124
PI-PLC-X
(185-330)


HG1014823
27694125:27694124
efhand
(31-59)


HG1014823
27694125:27694124
PI-PLC-Y
(483-563)


HG1014823
27694125:27694124
C2
(582-674)


HG1014824
28175817:28175816
no_pfam


HG1014825
28207917:28207916
Cornichon
(4-85)


HG1014826
28273134:28273133
PI-PLC-X
(245-390)


HG1014826
28273134:28273133
PI-PLC-Y
(543-658)


HG1014826
28273134:28273133
C2
(678-770)


HG1014826
28273134:28273133
efhand
(91-119)


HG1014827
28273138:28273137
C2
(172-241)


HG1014828
28277412:28277411
no_pfam


HG1014829
28279793:28279792
ABC_membrane
(337-572)


HG1014830
28374245:28374244
DUF857
(1128-1236)


HG1014830
28374245:28374244
DUF857
(297-406)


HG1014830
28374245:28374244
Zn_carbOpept
(501-684)


HG1014830
28374245:28374244
Zn_carbOpept
(56-270)


HG1014830
28374245:28374244
DUF857
(709-818)


HG1014830
28374245:28374244
Zn_carbOpept
(931-1109)


HG1014831
285917:285916
pkinase
(11-241)


HG1014831
285917:285916
SAM
(272-336)


HG1014832
28981412:28981411
Y_phosphatase
(1366-1597)


HG1014832
28981412:28981411
ig
(149-209)


HG1014832
28981412:28981411
Y_phosphatase
(1655-1888)


HG1014832
28981412:28981411
ig
(246-300)


HG1014832
28981412:28981411
fn3
(319-401)


HG1014832
28981412:28981411
fn3
(413-500)


HG1014832
28981412:28981411
ig
(47-109)


HG1014832
28981412:28981411
fn3
(512-594)


HG1014832
28981412:28981411
fn3
(606-696)


HG1014832
28981412:28981411
fn3
(708-800)


HG1014832
28981412:28981411
fn3
(812-895)


HG1014832
28981412:28981411
fn3
(906-991)


HG1014833
2924620:2924619
Kunitz_BPTI
(133-183)


HG1014833
2924620:2924619
Kunitz_BPTI
(38-88)


HG1014834
2951948:7637876
GDPD
(1-115)


HG1014835
30016:30015
Collagen
(109-158)


HG1014835
30016:30015
Collagen
(177-235)


HG1014835
30016:30015
Collagen
(236-295)


HG1014835
30016:30015
Collagen
(296-355)


HG1014835
30016:30015
Collagen
(356-415)


HG1014835
30016:30015
vwc
(40-95)


HG1014835
30016:30015
Collagen
(416-471)


HG1014836
31223:31222
pkinase
(1-61)


HG1014837
3132270:3132269
ABC_tran
(1316-1499)


HG1014837
3132270:3132269
ABC_membrane
(311-582)


HG1014837
3132270:3132269
ABC_tran
(654-827)


HG1014837
3132270:3132269
ABC_membrane
(971-1244)


HG1014838
3172147:219494
ig
(160-217)


HG1014838
3172147:219494
ig
(252-301)


HG1014839
33911:33910
fn3
(1127-1208)


HG1014839
33911:33910
fn3
(1220-1310)


HG1014839
33911:33910
fn3
(1458-1542)


HG1014839
33911:33910
fn3
(1571-1658)


HG1014839
33911:33910
integrin_B
(37-455)


HG1014839
33911:33910
Calx-beta
(979-1084)


HG1014840
33942:33941
integrin_A
(1032-1046)


HG1014840
33942:33941
FG-GAP
(310-361)


HG1014840
33942:33941
FG-GAP
(372-416)


HG1014840
33942:33941
FG-GAP
(426-468)


HG1014841
33957:33956
fn3
(1127-1208)


HG1014841
33957:33956
fn3
(1220-1310)


HG1014841
33957:33956
fn3
(1511-1595)


HG1014841
33957:33956
fn3
(1624-1711)


HG1014841
33957:33956
integrin_B
(37-455)


HG1014841
33957:33956
Calx-beta
(979-1084)


HG1014842
35658:35657
Collagen
(112-157)


HG1014842
35658:35657
vwc
(40-95)


HG1014843
3582767:3582766
CaMBD
(78-141)


HG1014844
37200:37199
ig
(160-217)


HG1014844
37200:37199
ig
(252-301)


HG1014845
37204:37203
ig
(161-210)


HG1014845
37204:37203
ig
(250-307)


HG1014845
37204:37203
ig
(69-126)


HG1014846
3721836:3721835
I_LWEQ
(641-834)


HG1014847
3721898:12804512
JTB
(1-94)


HG1014848
407590:407589
COLFI
(67-283)


HG1014849
4102188:4102187
ABC_tran
(1317-1500)


HG1014849
4102188:4102187
ABC_membrane
(311-583)


HG1014849
4102188:4102187
ABC_tran
(655-828)


HG1014849
4102188:4102187
ABC_membrane
(972-1245)


HG1014850
4587083:4587082
ABC_tran
(1220-1403)


HG1014850
4587083:4587082
ABC_membrane
(179-447)


HG1014850
4587083:4587082
ABC_tran
(588-759)


HG1014850
4587083:4587082
ABC_membrane
(860-1147)


HG1014851
4755085:14719826
Collagen
(1016-1075)


HG1014851
4755085:14719826
Collagen
(1076-1135)


HG1014851
4755085:14719826
Collagen
(109-150)


HG1014851
4755085:14719826
Collagen
(1136-1189)


HG1014851
4755085:14719826
COLFI
(1242-1460)


HG1014851
4755085:14719826
Collagen
(174-232)


HG1014851
4755085:14719826
Collagen
(233-292)


HG1014851
4755085:14719826
Collagen
(293-352)


HG1014851
4755085:14719826
Collagen
(353-412)


HG1014851
4755085:14719826
Collagen
(413-472)


HG1014851
4755085:14719826
Collagen
(473-532)


HG1014851
4755085:14719826
Collagen
(533-592)


HG1014851
4755085:14719826
Collagen
(593-652)


HG1014851
4755085:14719826
Collagen
(653-712)


HG1014851
4755085:14719826
Collagen
(713-772)


HG1014851
4755085:14719826
Collagen
(776-835)


HG1014851
4755085:14719826
Collagen
(836-895)


HG1014851
4755085:14719826
Collagen
(896-955)


HG1014851
4755085:14719826
Collagen
(956-1015)


HG1014852
4826563:4826562
ABC_tran
(1316-1499)


HG1014852
4826563:4826562
ABC_membrane
(311-582)


HG1014852
4826563:4826562
ABC_tran
(654-827)


HG1014852
4826563:4826562
ABC_membrane
(971-1244)


HG1014853
4836765:4836764
GPS
(342-394)


HG1014853
4836765:4836764
7tm_2
(400-665)


HG1014854
4894209:4894208
Cornichon
(1-126)


HG1014855
495678:495677
EPH_Ibd
(15-191)


HG1014855
495678:495677
fn3
(319-415)


HG1014855
495678:495677
fn3
(430-515)


HG1014855
495678:495677
pkinase
(616-875)


HG1014855
495678:495677
SAM
(906-970)


HG1014856
5002294:4826835
Peptidase_M10_N
(26-79)


HG1014857
5006891:5006890
ABC_tran
(1220-1403)


HG1014857
5006891:5006890
ABC_membrane
(179-447)


HG1014857
5006891:5006890
ABC_tran
(588-759)


HG1014857
5006891:5006890
ABC_membrane
(860-1147)


HG1014858
5031476:5031475
ABC_tran
(74-257)


HG1014859
5114047:5114046
Sec63
(268-584)


HG1014860
5726563:4557674
integrin_A
(1038-1052)


HG1014860
5726563:4557674
FG-GAP
(316-367)


HG1014860
5726563:4557674
FG-GAP
(378-422)


HG1014860
5726563:4557674
FG-GAP
(432-474)


HG1014861
5851985:15488900
zf-C3HC4
(16-56)


HG1014861
5851985:15488900
zf-B_box
(93-132)


HG1014862
606777:29447
no_pfam


HG1014863
6941892:6941891
zf-C3HC4
(16-44)


HG1014864
7022121:7022120
ank
(101-124)


HG1014864
7022121:7022120
ank
(68-100)


HG1014865
7106834:7106833
JTB
(10-117)


HG1014866
7159057:7159056
T4_deiodinase
(4-115)


HG1014867
762938:30092
COLFI
(17-226)


HG1014868
7768766:4826652
Dopey_N
(2-314)


HG1014869
7770185:7770184
Sec63
(2-318)


HG1014870
proteinkinase320A:proteinkinase320B
F5_F8_type_C
(34-182)


HG1014870
proteinkinase320A:proteinkinase320B
pkinase
(572-867)


HG1014871
307091:186775
thyroglobulin_1
(66-135)


HG1014872
31417919:12803236
Galactosyl_T_2
(53-300)


HG1014873
1160925:1160924
F5_F8_type_C
(34-182)


HG1014873
1160925:1160924
pkinase
(573-868)


HG1014874
179435:179434
ig
(160-217)


HG1014874
179435:179434
ig
(252-301)


HG1014875
219497:219496
ig
(160-217)


HG1014875
219497:219496
ig
(252-301)


HG1014875
219497:219496
ig
(341-398)


HG1014876
2554610:2554609
ABC_membrane
(369-656)


HG1014876
2554610:2554609
ABC_tran
(729-912)


HG1014876
2554610:2554609
ABC_tran
(97-268)


HG1014877
29387396:29387395
ig
(149-215)


HG1014877
29387396:29387395
ig
(47-109)


HG1014878
29421204:29421203
ank
(1006-1038)


HG1014878
29421204:29421203
ank
(1039-1071)


HG1014878
29421204:29421203
ank
(791-823)


HG1014878
29421204:29421203
ank
(824-847)


HG1014878
29421204:29421203
ank
(907-939)


HG1014878
29421204:29421203
ank
(940-972)


HG1014878
29421204:29421203
ank
(973-1005)


HG1014879
29476766:29476765
no_pfam


HG1014880
29792320:29792319
no_pfam


HG1014881
30046456:30046455
ABC_membrane
(312-547)


HG1014882
30046796:30046795
FG-GAP
(60-102)


HG1014882
30046796:30046795
FG-GAP
(6-50)


HG1014882
30046796:30046795
integrin_A
(651-665)


HG1014883
30313820:30313819
ABC_tran
(1177-1360)


HG1014883
30313820:30313819
ABC_membrane
(179-447)


HG1014883
30313820:30313819
ABC_tran
(588-759)


HG1014883
30313820:30313819
ABC_membrane
(860-1007)


HG1014884
31323051:31323050
Kunitz_BPTI
(250-300)


HG1014884
31323051:31323050
ldl_recept_a
(333-371)


HG1014884
31323051:31323050
Kunitz_BPTI
(391-441)


HG1014885
31873230:31873229
fn3
(105-188)


HG1014885
31873230:31873229
fn3
(1-93)


HG1014885
31873230:31873229
fn3
(199-284)


HG1014885
31873230:31873229
Y_phosphatase
(659-890)


HG1014885
31873230:31873229
Y_phosphatase
(948-1181)


HG1014886
32812254:32812253
PDZ
(1071-1159)


HG1014886
32812254:32812253
PDZ
(699-785)


HG1014886
32812254:32812253
PDZ
(842-920)


HG1014886
32812254:32812253
PDZ
(975-1063)


HG1014887
32966069:32966068
GDA1_CD39
(430-480)


HG1014887
32966069:32966068
GDA1_CD39
(93-332)


HG1014888
5825553:5825552
PEMT
(2-199)


HG1014889
11282038:6808452
Galactosyl_T_2
(1-218)


HG1014890
20138797:2605944
DSL
(178-240)


HG1014890
20138797:2605944
EGF
(311-344)


HG1014890
20138797:2605944
EGF
(351-382)


HG1014890
20138797:2605944
EGF
(389-420)


HG1014890
20138797:2605944
EGF
(427-458)


HG1014890
20138797:2605944
EGF
(465-495)


HG1014890
20138797:2605944
EGF
(502-533)


HG1014890
20138797:2605944
EGF
(540-571)


HG1014890
20138797:2605944
EGF
(640-671)


HG1014890
20138797:2605944
EGF
(678-709)


HG1014890
20138797:2605944
EGF
(716-747)


HG1014890
20138797:2605944
EGF
(755-786)


HG1014890
20138797:2605944
EGF
(793-824)


HG1014890
20138797:2605944
EGF
(831-862)


HG1014891
2136054:1060894
pkinase
(113-372)


HG1014891
2136054:1060894
SAM
(403-467)


HG1014892
2168139:6013007
no_pfam


HG1014893
25089854:3641620
DUF857
(1128-1236)


HG1014893
25089854:3641620
DUF857
(297-406)


HG1014893
25089854:3641620
Zn_carbOpept
(501-684)


HG1014893
25089854:3641620
Zn_carbOpept
(56-270)


HG1014893
25089854:3641620
DUF857
(709-818)


HG1014893
25089854:3641620
Zn_carbOpept
(931-1109)


HG1014894
263064:33941
no_pfam


HG1014895
32425685:12655128
Sec63
(170-486)


HG1014896
7442652:3550323
ABC_tran
(1316-1499)


HG1014896
7442652:3550323
ABC_membrane
(311-582)


HG1014896
7442652:3550323
ABC_tran
(654-827)


HG1014896
7442652:3550323
ABC_membrane
(971-1244)


HG1014897
7459693:2293520
integrin_B
(37-455)


HG1014898
86966:219500
ig
(160-217)


HG1014898
86966:219500
ig
(252-301)


HG1014899
8928547:5685863
ABC_tran
(1220-1403)


HG1014899
8928547:5685863
ABC_membrane
(179-447)


HG1014899
8928547:5685863
ABC_tran
(588-759)


HG1014899
8928547:5685863
ABC_membrane
(860-1147)


HG1014900
NP_857593.1:NM_181642
Kunitz_BPTI
(250-300)


HG1014900
NP_857593.1:NM_181642
ldl_recept_a
(333-371)


HG1014900
NP_857593.1:NM_181642
Kunitz_BPTI
(391-441)








Claims
  • 1-82. (canceled)
  • 83. A method for diagnosing cancer in a patient, comprising: (a) contacting a patient sample with an antibody that binds to a disintegrin and metalloproteinase domain 8 precursor (“ADAM8”) protein from homo sapiens; and(b) detecting binding to said antibody to determine whether the subject has cancer.
  • 84. A method according to claim 83, wherein said patient sample is blood, serum, or plasma.
  • 85. A method according to claim 83, wherein the antibody is a monoclonal antibody, a polyclonal antibody, or a single chain antibody.
  • 86. A method according to claim 83, wherein said protein binding is detected using a labeled secondary antibody.
  • 87. A method according to claim 83, wherein said cancer is lung cancer.
  • 88. A method according to claim 83, wherein said method further comprises combining ADAM8 into a panel that comprises two or more markers detected to determine whether the subject has cancer.
PRIORITY CLAIM

This application is related to U.S. application Ser. No. 60/444,944, “Methods of Use of Human Lung-Expressed Polypeptides Encoded by Polynucleotides and Antibodies Thereto,” filed Jan. 31, 2003; U.S. application Ser. No. 60/444,913, “Methods of Use of Human Lung-Expressed Polypeptides Encoded by Polynucleotides and Antibodies Thereto,” filed Feb. 3, 2003; U.S. application Ser. No. 60/446,647, “Methods of Use of Human Lung-Expressed Polypeptides Encoded by Polynucleotides and Antibodies Thereto,” filed Feb. 10, 2003; and U.S. application Ser. No. 60/448,837, “Methods of Use of Human Lung-Expressed Polypeptides Encoded by Polynucleotides and Antibodies Thereto,” filed Feb. 18, 2003, the contents of all of which are incorporated herein by reference in their entirety.

PCT Information
Filing Document Filing Date Country Kind 371c Date
PCT/US04/02655 1/30/2004 WO 00 2/23/2007
Provisional Applications (4)
Number Date Country
60443944 Jan 2003 US
60444913 Feb 2003 US
60446647 Feb 2003 US
60448837 Feb 2003 US