MARKER SEQUENCES FOR MULTIPLE SCLEROSIS AND USE THEREOF

Information

  • Patent Application
  • 20150024962
  • Publication Number
    20150024962
  • Date Filed
    August 06, 2014
    10 years ago
  • Date Published
    January 22, 2015
    9 years ago
Abstract
The present invention relates to new marker sequences for multiple sclerosis and the diagnostic use thereof together with a method for screening of potential active substances for multiple sclerosis by means of these marker sequences. Furthermore, the invention relates to a diagnostic device containing such marker sequences for multiple sclerosis, in particular a protein biochip and the use thereof.
Description
SUBMISSION OF SEQUENCE LISTING

The Sequence Listing associated with this application is filed in electronic format via EFS-Web and hereby incorporated by reference into the specification in its entirety. The name of the text file containing the Sequence Listing is Sequence_Listing1446200014_US.txt. The size of the text file is 1, 643 KB, and the text file was created on Aug. 6, 2014.


The present invention relates to new marker sequences for multiple sclerosis and the diagnostic use thereof together with a method for screening potential active substances for multiple sclerosis by means of these marker sequences. Furthermore, the invention relates to a diagnostic device containing marker sequences of this type for multiple sclerosis, in particular a protein biochip and the use thereof.


Protein biochips are gaining increasing industrial importance in analysis and diagnosis as well as in pharmaceutical development. Protein biochips have become established as screening instruments.


The rapid and highly parallel detection of a multiplicity of specifically binding analysis molecules in a single experiment is rendered possible hereby. To produce protein biochips, it is necessary to have the required proteins available. For this purpose, in particular protein expression libraries have become established. The high throughput cloning of defined open reading frames is one possibility (Heyman, J. A., Cornthwaite, J., Foncerrada, L., Gilmore, J. R., Gontang, E., Hartman, K. J., Hernandez, C. L., Hood, R., Hull, H. M., Lee, W. Y., Marcil, R., Marsh, E. J., Mudd, K. M., Patino, M. J., Purcell, T. J., Rowland, J. J., Sindici, M. L. and Hoeffler, J. P., (1999) Genome-scale cloning and expression of individual open reading frames using topoisomerase I-mediated ligation. Genome Res, 9, 383-392; Kersten, B., Feilner, T., Kramer, A., Wehrmeyer, S., Possling, A., Witt, I., Zanor, M. I., Stracke, R., Lueking, A., Kreutzberger, J., Lehrach, H. and Cahill, D. J. (2003) Generation of Arabidopsis protein chip for antibody and serum screening. Plant Molecular Biology, 52, 999-1010; Reboul, J., Reboul, J., Vaglio, P., Rual, J. F., Lamesch, P., Martinez, M., Armstrong, C. M., Li, S., Jacotot, L., Bertin, N., Janky, R., Moore, T., Hudson, J. R., Jr., Hartley, J. L., Brasch, M. A., Vandenhaute, J., Boulton, S., Endress, G. A., Jenna, S., Chevet, E., Papasotiropoulos, V., Tolias, P. P., Ptacek, J., Snyder, M., Huang, R., Chance, M. R., Lee, H., Doucette-Stamm, L., Hill, D. E. and Vidal, M. (2003) C. elegans ORFeome Version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Nat Genet, 34, 35-41.; Walhout, A. J., Temple, G. F., Brasch, M. A., Hartley, J. L., Lorson, M. A., van den Heuvel, S. and Vidal, M. (2000) GATEWAY recombinational cloning: application to the cloning of large numbers of open reading frames or ORFeomes. Methods Enzymol, 328, 575-592). However, an approach of this type is strongly connected to the progress of the genome sequencing projects and the annotation of these gene sequences. Furthermore, the determination of the expressed sequence can be ambiguous due to differential splicing processes. This problem may be circumvented by the application of cDNA expression libraries (Büissow, K., Cahill, D., Nietfeld, W., Bancroft, D., Scherzinger, E., Lehrach, H. and Walter, G. (1998) A method for global protein expression and antibody screening on high-density filters of an arrayed cDNA library. Nucleic Acids Research, 26, 5007-5008; Büssow, K., Nordhoff, E., Lübbert, C, Lehrach, H. and Walter, G. (2000) A human cDNA library for high-throughput protein expression screening. Genomics, 65, 1-8; Holz, C, Lueking, A., Bovekamp, L., Gutjahr, C, Bolotina, N., Lehrach, H. and Cahill, D. J. (2001) A human cDNA expression library in yeast enriched for open reading frames. Genome Res, 11, 1730-1735; Lueking, A., Holz, C, Gotthold, C, Lehrach, H. and Cahill, D. (2000) A system for dual protein expression in Pichia pastoris and Escherichia coli, Protein Expr. Purif, 20, 372-378). The cDNA of a particular tissue is hereby cloned into a bacterial or an eukaryotic expression vector, such as, e.g., yeast. The vectors used for the expression are generally characterized in that they carry inducible promoters that may be used to control the time of protein expression. Furthermore, expression vectors have sequences for so-called affinity epitopes or affinity proteins, which on the one hand permit the specific detection of the recombinant fusion proteins by means of an antibody directed against the affinity epitope, and on the other hand the specific purification via affinity chromatography (IMAC) is rendered possible.


For example, the gene products of a cDNA expression library from human fetal brain tissue in the bacterial expression system Escherichia coli were arranged in high-density format on a membrane and could be successfully screened with different antibodies. It was possible to show that the proportion of full-length proteins is at least 66%. Additionally, the recombinant proteins from the library could be expressed and purified in a high-throughput manner (Braun P., Hu, Y., Shen, B., Halleck, A., Koundinya, M., Harlow, E. and LaBaer, J. (2002) Proteome-scale purification of human proteins from bacteria. Proc Natl Acad Sci USA, 99, 2654-2659; Büssow (2000) supra; Lueking, A., Horn, M., Eickhoff, H., Büssow, K., Lehrach, H. and Walter, G. (1999) Protein microarrays for gene expression and antibody screening. Analytical Biochemistry, 270, 103-111). Protein biochips of this type based on cDNA expression libraries are in particular the subject matter of WO 99/57311 and WO 99/57312.


Furthermore, in addition to antigen-presenting protein biochips, antibody-presenting arrangements are likewise described (Lal et al (2002) Antibody arrays: An embryonic but rapidly growing technology, DDT, 7, 143-149; Kusnezow et al. (2003), Antibody microarrays: An evaluation of production parameters, Proteomics, 3, 254-264).


However, there is a great need to provide indication-specific diagnostic devices, such as a protein biochip.


Marker sequences and the diagnostic use thereof for multiple sclerosis, in particular in the embodiment of a protein biochip, as well as tests in this regard for the screening of active substances have not been described in the prior art.







The object of the present invention is therefore to provide marker sequences and their diagnostic use.


The provision of specific marker sequences permits a reliable diagnosis and stratification of patients with multiple sclerosis, in particular by means of a protein biochip.


The invention therefore relates to the use of marker sequences for the diagnosis of multiple sclerosis, wherein at least one marker sequence of a cDNA selected from the group SEQ 1-395 or respectively a protein coding therefor or respectively a partial sequence or fragment thereof (hereinafter: marker sequences according to the invention) is determined on or from a patient to be examined.


It was possible to identify the marker sequences according to the invention by means of differential screening of samples from healthy test subjects with patient samples with multiple sclerosis.


The term “multiple sclerosis (MS), also encephalomyelitis disseminata)” is defined, e.g., according to Pschyrembel, de Gruyter, 261st edition (2007), Berlin and relates to an autoimmune inflammatory/demyelinating and degenerative disorder of the central nervous system.


In a further embodiment at least 2 to 5 or 10, preferably 30 to 50 marker sequences or 50 to 100 or more marker sequences are determined on or from a patient to be examined.


In a particular embodiment of the invention, the marker sequences of the SEQ 1-20 are particularly preferred, the marker sequences SEQ 21-50 are preferred, and furthermore the marker sequences SEQ 51-100 are preferred.


In a further embodiment of the invention, the marker sequences SEQ 1-10 and SEQ 11-20, as well as preferably SEQ 21-30, SEQ 31-40 or SEQ 41-50 are respectively particularly preferred.


In a further embodiment of the invention, the marker sequences according to the invention can likewise be combined, supplemented, fused or expanded likewise with known biomarkers for this indication.


In a preferred embodiment, the determination of the marker sequences is carried out outside the human body and the determination is carried out in an ex vivo/in vitro diagnosis.


In a further embodiment of the invention, the invention relates to the use of marker sequences as diagnostic agents, wherein at least one marker sequence of a cDNA is selected from the group SEQ 1-395 or respectively a protein coding therefor or respectively a partial sequence or fragment thereof.


Furthermore, the invention relates to a method for the diagnosis of multiple sclerosis, wherein a.) at least one marker sequence of a cDNA selected from the group SEQ 1-395 or respectively a protein coding therefor or respectively a partial sequence or fragment thereof is applied to a solid support and b.) is brought into contact with body fluid or tissue extract of a patient and c.) the detection of an interaction of the body fluid or tissue extract with the marker sequences from a.) is carried out.


The invention therefore likewise relates to diagnostic agents for the diagnosis of multiple sclerosis respectively selected from the group SEQ 1-395 or respectively a protein coding therefor or respectively a partial sequence or fragment thereof.


The detection of an interaction of this type can be carried out, for example, by a probe, in particular by an antibody.


The invention therefore likewise relates to the object of providing a diagnostic device or an assay, in particular a protein biochip, which permits a diagnosis or examination for multiple sclerosis.


Furthermore, the invention relates to a method for the stratification, in particular risk stratification and/or therapy control of a patient with multiple sclerosis, wherein at least one marker sequence of a cDNA selected from the group SEQ 1-395 or respectively a protein coding therefor is determined on a patient to be examined.


Furthermore, the stratification of the patients with multiple sclerosis in new or established subgroups of multiple sclerosis is also covered, as well as the expedient selection of patient groups for the clinical development of new therapeutic agents. The term therapy control likewise covers the allocation of patients to responders and non-responders regarding a therapy or the therapy course thereof.


“Diagnosis” for the purposes of this invention means the positive determination of multiple sclerosis by means of the marker sequences according to the invention as well as the assignment of the patients to multiple sclerosis. The term diagnosis covers medical diagnostics and examinations in this regard, in particular in-vitro diagnostics and laboratory diagnostics, likewise proteomics and nucleic acid blotting. Further tests can be necessary to be sure and to exclude other diseases. The term diagnosis therefore likewise covers the differential diagnosis of multiple sclerosis by means of the marker sequences according to the invention and the prognosis of multiple sclerosis.


“Stratification or therapy control” for the purposes of this invention means that the method according to the invention renders possible decisions for the treatment and therapy of the patient, whether it is the hospitalization of the patient, the use, effect and/or dosage of one or more drugs, a therapeutic measure or the monitoring of a course of the disease and the course of therapy or etiology or classification of a disease, e.g., into a new or existing subtype or the differentiation of diseases and the patients thereof.


In a further embodiment of the invention, the term “stratification” covers in particular the risk stratification with the prognosis of an outcome of a negative health event.


Within the scope of this invention, “patient” means any test subject—human or mammal—with the proviso that the test subject is tested for multiple sclerosis.


The term “marker sequences” for the purposes of this invention means that the cDNA or the polypeptide or protein that can be respectively obtained therefrom are significant for multiple sclerosis. For example, the cDNA or the polypeptide or protein that can be respectively obtained therefrom can exhibit an interaction with substances from the body fluid or tissue extract of a patient with multiple sclerosis (e.g., antigen (epitope)/antibody (paratope) interaction). For the purposes of the invention “wherein at least one marker sequence of a cDNA selected from the group SEQ 1-395 or respectively a protein coding therefor or respectively a partial sequence or fragment thereof is determined on a patient to be examined” means that an interaction between the body fluid or tissue extract of a patient and the marker sequences according to the invention is detected. An interaction of this type is, e.g., a bond, in particular a binding substance on at least one marker sequence according to the invention or in the case of a cDNA the hybridization with a suitable substance under selected conditions, in particular stringent conditions (e.g., such as usually defined in J. Sambrook, E. F. Fritsch, T. Maniatis (1989), Molecular cloning: A laboratory manual, 2nd Edition, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, USA or Ausubel, “Current Protocols in Molecular Biology,” Green Publishing Associates and Wiley Interscience, N. Y. (1989)). One example of stringent hybridization conditions is: hybridization in 4×SSC at 65° C. (alternatively in 50% formamide and 4×SSC at 42° C.), followed by several washing steps in 0.1×SSC at 65° C. for a total of approximately one hour. An example of less stringent hybridization conditions is hybridization in 4×SSC at 37° C., followed by several washing steps in 1×SSC at room temperature.


According to the invention, substances of this type are constituents of a body fluid, in particular blood, whole blood, blood plasma, blood serum, patient serum, urine, cerebrospinal fluid, synovial fluid or of a tissue extract of the patient.


In a further embodiment of the invention, however, the marker sequences according to the invention can be present in a significantly higher or lower expression rate or concentration that indicates multiple sclerosis. The relative sick/healthy expression rates of the marker sequences for multiple sclerosis according to the invention are hereby determined by means of proteomics or nucleic acid blotting.


In a further embodiment of the invention, the marker sequences have a recognition signal that is addressed to the substance to be bound (e.g., antibody, nucleic acid). It is preferred according to the invention for a protein the recognition signal is an epitope and/or a paratope and/or a hapten and for a cDNA is a hybridization or binding region.


The marker sequences according to the invention are the subject matter of Table A and can be clearly identified by the respectively cited database entry (also by means of the Internet: http://www.ncbi.nlm.nih.gov/) (see in Table A: accession no. there).


According to the invention, the marker sequences also cover those modifications of the cDNA sequence and the corresponding amino acid sequence as chemical modification, such as citrullination, acetylation, phosphorylation, glycosylation or poly(A) strand and other modifications known to one skilled in the art.


In a further embodiment of the invention, partial sequences or fragments of the marker sequences according to the invention are likewise covered. In particular those partial sequences that have an identity of 95%, 90%, in particular 80% or 70% with the marker sequences according to the invention.


In a further embodiment, the respective marker sequence can be represented in different quantities in one more regions on a solid support. This permits a variation of the sensitivity. The regions can have respectively a totality of marker sequences, i.e., a sufficient number of different marker sequences, in particular 2 to 5 or 10 or more and optionally more nucleic acids and/or proteins, in particular biomarkers. However, at least 96 to 25,000 (numerical) or more from different or identical marker sequences and further nucleic acids and/or proteins, in particular biomarkers are preferred. Furthermore preferred are more than 2, 5000, in particular preferred 10,000 or more different or identical marker sequences and optionally further nucleic acids and/or proteins, in particular biomarkers.


Another object of the invention relates to an arrangement of marker sequences containing at least one marker sequence of a cDNA selected from the group SEQ 1-395 or respectively a protein coding therefor. Preferably, the arrangement contains at least 2 to 5 or 10, preferably 30 to 50 marker sequences or 50 to 100 or more marker sequences. Within the scope of this invention, “arrangement” is synonymous with “array,” and if this “array” is used to identify substances on marker sequences, this is to be understood to be an “assay” or diagnostic device. In a preferred embodiment, the arrangement is designed such that the marker sequences represented on the arrangement are present in the form of a grid on a solid support. Furthermore, those arrangements are preferred that permit a high-density arrangement of protein binders and the marker sequences are spotted. Such high-density spotted arrangements are disclosed, for example, in WO 99/57311 and WO 99/57312 and can be used advantageously in a robot-supported automated high-throughput method.


Within the scope of this invention, however, the term “assay” or diagnostic device likewise comprises those embodiments of a device, such as ELISA (e.g., individual wells of a microtiter plate are coated with the marker sequences or combinations of marker sequences according to the invention, optionally applied in a robot-supported manner in the individual wells of the microtiter plate; examples are diagnostic ELISA kits by Phadia or “Searchlight” multiplex ELISA kits by Pierce/Thermo Fisher Scientific), bead-based assay (spectrally distinguishable bead populations are coated with marker sequences/combinations of marker sequences. The patient sample is incubated with this bead population and bound (auto) antibodies are detected by means of a further fluorescence-labeled secondary antibody/detection reagent via measurement of the fluorescence; i.e., Borrelia IgG kit or Athena Multilyte by Multimetrix), line assay (marker sequences according to the invention or combinations of marker sequences are immobilized on membranes in a robot-supported manner, which are examined/incubated with the patient sample; example “Euroline” by Euroimmun AG), Western Blot (example “Euroline-WB” by Euroimmun AG), immunochromatographic methods (e.g., lateral flow immunoassays; marker sequences/combinations of marker sequences are immobilized on test strips (membranes, U.S. Pat. No. 5,714,389 and the like); example “One Step HBsAg” test device by Acon Laboratories) or similar immunological single or multiplex detection measures.


The marker sequences of the arrangement are fixed on a solid support, but preferably spotted or immobilized even printed on, i.e. applied in a reproducible manner. One or more marker sequences can be present multiple times in the totality of all marker sequences and present in different quantities based on one spot. Furthermore, the marker sequences can be standardized on the solid support (i.e., by means of serial dilution series of, e.g., human globulins as internal calibrators for data normalization and quantitative evaluation).


The invention therefore relates to an assay or a protein biochip comprising an arrangement containing marker sequences according to the invention.


In a further embodiment, the marker sequences are present as clones. Clones of this type can be obtained, for example, by means of a cDNA expression library according to the invention (Büssow et al. 1998 (supra)). In a preferred embodiment, such expression libraries containing clones are obtained using expression vectors from a cDNA expression library comprising the cDNA marker sequences. These expression vectors preferably contain inducible promoters. The induction of the expression can be carried out, e.g., by means of an inductor, such as IPTG. Suitable expression vectors are described in Terpe et al. (Terpe T Appl Microbiol Biotechnol. 2003 January; 60(5): 523-33).


One skilled in the art is familiar with expression libraries, they can be produced according to standard works, such as Sambrook et al, “Molecular Cloning, A laboratory handbook, 2nd edition (1989), CSH press, Cold Spring Harbor, N.Y. Expression libraries are also preferred which are tissue-specific (e.g., human tissue, in particular human organs). Furthermore included according to the invention are expression libraries that can be obtained by exon-trapping. A synonym for expression library is expression bank.


Also preferred are protein biochips or corresponding expression libraries that do not exhibit any redundancy (so-called: Uniclone® library) and that may be produced, for example, according to the teachings of WO 99/57311 and WO 99/57312. These preferred Uniclone libraries have a high portion of non-defective fully expressed proteins of a cDNA expression library.


Within the context of this invention, the clones can also be, but not limited to, transformed bacteria, recombinant phages or transformed cells from mammals, insects, fungi, yeasts or plants.


The clones are fixed, spotted or immobilized on a solid support.


The invention therefore relates to an arrangement wherein the marker sequences are present as clones.


Additionally, the marker sequences can be present in the respective form of a fusion protein, which contains, for example, at least one affinity epitope or tag. The tag may be one such as contains c-myc, his tag, arg tag, FLAG, alkaline phosphatase, VS tag, T7 tag or strep tag, HAT tag, NusA, S tag, SBP tag, thioredoxin, DsbA, a fusion protein, preferably a cellulose-binding domain, green fluorescent protein, maltose-binding protein, calmodulin-binding protein, glutathione S-transferase or lacZ.


A marker sequence can also be composed of several individual marker sequences. This can comprise the cloning of individual fragments to form a large common fragment and the expression of this combined fragment.


In all of the embodiments, the term “solid support” covers embodiments such as a filter, a membrane, a magnetic or fluorophore-labeled bead, a silica wafer, glass, metal, ceramics, plastics, a chip, a target for mass spectrometry or a matrix. However, a filter is preferred according to the invention.


As a filter, furthermore PVDF, nitrocellulose or nylon is preferred (e.g., Immobilon P Millipore, Protran Whatman, Hybond N+Amersham).


In another preferred embodiment of the arrangement according to the invention, the arrangement corresponds to a grid with the dimensions of a microtiter plate (8-12 wells strips, 96 wells, 384 wells or more), a silica wafer, a chip, a target for mass spectrometry, or a matrix.


In a further embodiment, the invention relates to an assay or a protein biochip for identifying and characterizing a substance for multiple sclerosis, characterized in that an arrangement or assay according to the invention is a.) brought into contact with at least one substance to be tested and b.) a binding success is detected.


Furthermore, the invention relates to a method for identifying and characterizing a substance for multiple sclerosis, characterized in that an arrangement or assay according to the invention is a.) brought into contact with at least one substance to be tested and b.) a binding success is detected.


The substance to be tested can be any native or non-native biomolecule, a synthetic chemical molecule, a mixture or a substance library.


After the substance to be tested contacts a marker sequence, the binding success is evaluated, which, for example, is carried out using commercially available image analyzing software (GenePix Pro (Axon Laboratories), Aida (Ray test), ScanArray (Packard Bioscience).


The visualization of protein-protein interactions according to the invention (e.g., protein on marker sequence, as antigen/antibody) or corresponding “means for detecting the binding success” can be performed, for example, using fluorescence labeling, biotinylation, radioisotope labeling or colloid gold or latex particle labeling in the usual way. A detection of bound antibodies is carried out with the aid of secondary antibodies, which are labeled with commercially available reporter molecules (e.g., Cy, Alexa, Dyomics, FITC or similar fluorescent dyes, colloidal gold or latex particles), or with reporter enzymes, such as alkaline phosphatase, horseradish peroxidase, etc., and the corresponding colorimetric, fluorescent or chemiluminescent substrates. Readout is conducted, e.g., using a microarray laser scanner, a CCD camera or visually.


In a further embodiment, the invention relates to a drug/active substance or prodrug developed for multiple sclerosis and obtainable through the use of the assay or protein biochip according to the invention.


The invention therefore likewise relates to the use of an arrangement according to the invention or an assay for screening active substances for multiple sclerosis.


In a further embodiment, the invention therefore likewise relates to a target for the treatment and therapy of multiple sclerosis respectively selected from the group SEQ 1-395 or a protein respectively coding therefor.


In a further embodiment, the invention likewise relates to the use of the marker sequences according to the invention, preferably in the form of an arrangement, as an affinity material for carrying out an apheresis or in the broadest sense a blood lavage, wherein substances from body fluids of a patient with multiple sclerosis, such as blood or plasma, bind to the marker sequences according to the invention and consequently can be selectively withdrawn from the body fluid.


EXAMPLES AND FIGURES

Ten or more patient samples were individually screened against a cDNA expression library. The multiple sclerosis-specific expression clones were determined through a comparison with ten or more healthy samples. The identity of the marker sequences was determined by DNA sequencing.



FIG. 1 shows the differential screening between two protein biochips from respectively one cDNA expression bank of a patient and a healthy test subject. The differential clones are detected by means of fluorescent labeling and evaluated by means of bioinformatics.












TABLE A







76
00800_544_G03
NT_024000

Homo sapiens chromosome 9 genomic contig, reference assembly



77
00800_545_A07
NM_004380

Homo sapiens CREB binding protein (Rubinstein-Taybi syndrome) (CREBBP), mRNA



78
00800_545_C01
NT_010393

Homo sapiens chromosome 16 genomic contig, reference assembly



79
00800_545_J02
NM_138559

Homo sapiens B-cell CLL/lymphoma 11A (zinc finger protein) (BCL11A),



80
00800_545_O21

transcript variant 3, mRNA


81
00800_546_O21
NM_006924

Homo sapiens splicing factor, arginine/serine-rich 1 (splicing factor 2,






alternate splicing factor) (SFRS1), mRNA


82
00800_548_E20
NM_002813

Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 9






(PSMD9), mRNA


83
00800_548_F15
NM_024832

Homo sapiens Ras and Rab interactor 3 (RIN3), mRNA



84
00800_548_P22
NM_022156

Homo sapiens dihydrouridine synthase 1-like (S. cerevisiae) (DUS1L), mRNA



85
00800_549_F07
NM_014497

Homo sapiens zinc finger protein 638 (ZNF638), transcript variant 1, mRNA



86
00800_550_A02
NM_016406

Homo sapiens ubiquitin-fold modifier conjugating enzyme 1 (UFC1), mRNA



87
00800_551_L21
NM_005861

Homo sapiens STIP1 homology and U-box containing protein 1 (STUB1), mRNA



88
00800_551_M08
NM_001569

Homo sapiens interleukin-1 receptor-associated kinase 1 (IRAK1), transcript






variant 1, mRNA


89
00800_552_D16
NM_012398

Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I, gamma






(PIP5K1C), mRNA


90
00800_552_E08
NT_037887

Homo sapiens chromosome 16 genomic contig, reference assembly



91
00800_552_K06


92
00800_554_G09
NM_006185

Homo sapiens nuclear mitotic apparatus protein 1 (NUMA1), mRNA



93
00800_554_P20
NW_926018

Homo sapiens chromosome 16 genomic contig, alternate assembly






(based on Celera assembly)


94
00800_556_D10
NM_001005751

Homo sapiens similar to KIAA0592 protein (LOC387680), mRNA



95
00800_557_I07
NM_024040

Homo sapiens CUE domain containing 2 (CUEDC2), mRNA



96
00800_558_M02
NM_005861

Homo sapiens STIP1 homology and U-box containing protein 1 (STUB1), mRNA



97
00800_559_B12
NM_022370

Homo sapiens roundabout, axon guidance receptor, homolog 3 (Drosophila)






(ROBO3), mRNA


98
00800_562_H23
NT_010641

Homo sapiens chromosome 17 genomic contig, reference assembly



99
00800_563_H18
NW_926018

Homo sapiens chromosome 16 genomic contig, alternate assembly






(based on Celera assembly)


100
00800_568_M18
NM_002383

Homo sapiens MYC-associated zinc finger protein






(purine-binding transcription factor) (MAZ), mRNA


101
00800_569_P20
NM_019116

Homo sapiens ubiquitin-binding protein homolog (UBPH), mRNA



102
00800_573_M18
NM_016162

Homo sapiens inhibitor of growth family, member 4 (ING4), mRNA



103
00800_573_P23
NM_016474

Homo sapiens chromosome 3 open reading frame 19 (C3orf19), mRNA



104
00800_574_H11
NM_182471

Homo sapiens pyruvate kinase, muscle (PKM2), transcript variant 3, mRNA



105
00800_577_J03
XM_001126211
PREDICTED: Homo sapiens similar to deoxythymidylate kinase





(thymidylate kinase), transcript variant 4 (LOC727761), mRNA


106
00800_578_A04
XM_001132864
PREDICTED: Homo sapiens huntingtin interacting protein 1 related





(HIP1R), mRNA


107
00800_578_I13
NM_022762

Homo sapiens required for melotic nuclear division 5 homolog B






(S. cerevisiae) (RMND5B), mRNA


108
00800_578_I17
NT_023666

Homo sapiens chromosome 8 genomic contig, reference assembly



109
00800_578_I19
NM_016162

Homo sapiens inhibitor of growth family, member 4 (ING4), mRNA



110
00800_578_L14
NM_016162

Homo sapiens inhibitor of growth family, member 4 (ING4), mRNA



111
00800_578_L20
NM_032514

Homo sapiens microtubule-associated protein 1 light chain 3 alpha (MAP1LC3A),






transcript variant 1, mRNA


112
00800_578_N23
NM_030795

Homo sapiens stathmin-like 4 (STMN4), mRNA



113
00800_578_P10
NM_024040

Homo sapiens CUE domain containing 2 (CUEDC2), mRNA



114
00800_578_P05
NM_002383

Homo sapiens MYC-associated zinc finger protein






(purine-binding transcription factor) (MAZ), mRNA


115
00800_579_A01
NM_022898

Homo sapiens B-cell CLL/lymphoma 11B (zinc finger protein) (BCL11B),






transcript variant 2, mRNA


116
00800_579_P10
NM_001018097

Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 9, mRNA



117
00800_580_A12
NM_162705

Homo sapiens polymerase (RNA) I polypeptide D, 16 kDa (POLR1D), transcript






variant 2, mRNA


118
00800_581_K11
NM_002825

Homo sapiens pleiotrophin (heparin binding growth factor 8, neurite growth-






promoting factor 1) (PTN), mRNA


119
00800_581_L24
NT_011520

Homo sapiens chromosome 22 genomic contig, reference assembly



120
00800_582_E09
NT_037887

Homo sapiens chromosome 16 genomic contig, reference assembly



121
00800_582_I09
NM_002032

Homo sapiens ferritin, heavy polypeptide 1 (FTH1), mRNA



122
00800_582_K06
NM_001262

Homo sapiens cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)






(CDKN2C), transcript variant 1, mRNA


123
00800_582_M24
NM_181697

Homo sapiens peroxiredoxin 1 (PRDX1), transcript variant 3, mRNA



124
00800_584_G07
NM_014944

Homo sapiens calsyntenin 1 (CLSTN1), transcript variant 2, mRNA



125
00800_584_K08
NM_002013

Homo sapiens FK506 binding protein 3, 25 kDa (FKBP3), mRNA



126
00800_584_M24
NM_005626

Homo sapiens splicing factor, arginine/serine-rich 4 (SFRS4), mRNA



127
00800_585_P03
NM_001005751

Homo sapiens similar to KIAA0592 protein (LOC387680), mRNA



128
00800_586_N14
NM_007278

Homo sapiens GABA(A) receptor-associated protein (GABARAP), mRNA



129
00800_589_A19
NM_003434

Homo sapiens zinc finger protein 133 (ZNF133), mRNA



130
00800_589_A21
NM_003434

Homo sapiens zinc finger protein 133 (ZNF133), mRNA



131
00800_589_A07
NM_015140

Homo sapiens tubulin tyroslne ligase-like family, member 12 (TTLL12), mRNA



132
00800_589_F10
NM_012398

Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (PIP5K1C),






mRNA


133
00800_589_I02
NM_018683

Homo sapiens zinc finger protein 313 (ZNF313), mRNA



134
00800_589_M21
NM_153849

Homo sapiens tropomyosin 3 (TPM3), transcript variant 2, mRNA



135
00800_590_A22
NM_024040

Homo sapiens CUE domain containing 2 (CUEDC2), mRNA



136
00800_590_A24
NM_024040

Homo sapiens CUE domain containing 2 (CUEDC2), mRNA



137
00800_590_B11
NM_020967

Homo sapiens nuclear receptor coactivator 5 (NCOA5), mRNA



138
00800_590_C18
NM_018406

Homo sapiens ubiquitin-fold modifier conjugating enzyme 1 (UFC1), mRNA



139
00800_591_H12
NM_001010926

Homo sapiens hairy and enhancer of split 5 (Drosophila) (HES5), mRNA



140
00800_591_K11
NM_003926

Homo sapiens methyl-CpG binding domain protein 3 (MBD3), mRNA



141
00800_591_M16
NM_003130

Homo sapiens sorcin (SRI), transcript variant 1, mRNA



142
00800_592_H23
NM_144999

Homo sapiens leucine rich repeat containing 45 (LRRC45), mRNA



143
00800_592_I16
NM_002475

Homo sapiens myosin, light chain 6B, alkali, smooth muscle and non-muscle






(MYL6B), mRNA


144
00800_592_K05
NM_000477

Homo sapiens albumin (ALB), mRNA



145
00800_594_I15
NM_016300

Homo sapiens cyclic AMP-regulated phosphoprotein, 21 kD (ARPP-21),






transcript variant 1, mRNA


146
00800_594_M05
NM_022839

Homo sapiens mitochondrial ribosomal protein S11 (MRPS11), nuclear gene encoding






mitochondrial protein, transcript variant 1, mRNA


147
00800_595_J02
NM_001281

Homo sapiens cytoskeleton associated protein 1 (CKAP1), mRNA



148
00800_595_K14
NM_182471

Homo sapiens pyruvate kinase, muscle (PKM2), transcript variant 3, mRNA



149
00800_595_P16
NM_005861

Homo sapiens STIP1 homology and U-box containing protein 1 (STUB1), mRNA



150
00800_596_A10
NM_006086

Homo sapiens tubulin, beta 3 (TUBB3), mRNA



151
00800_596_C04
NM_015894

Homo sapiens stathmin-like 3 (STMN3), mRNA



152
00800_596_D09
NM_006086

Homo sapiens tubulin, beta 3 (TUBB3), mRNA



153
00800_596_E08
NM_013442

Homo sapiens stomatin (EPB72)-like 2 (STOML2), mRNA



154
00800_596_N16
XM_001126014
PREDICTED: Homo sapiens similar to Cyclin-L2 (Paneth cell-enhanced expression





protein), transcript variant 1 (LOC727877), mRNA


155
00800_596_N21
NM_018434

Homo sapiens ring finger protein 130 (RNF130), mRNA



156
00800_597_D15
NM_024671

Homo sapiens zinc finger protein 768 (ZNF768), mRNA



167
00800_598_H13


158
00800_598_J16


159
00800_599_C24
NM_001321

Homo sapiens cysteine and glycine-rich protein 2 (CSRP2), mRNA



160
00800_599_P14
NM_182923

Homo sapiens kinesin 2 (KNS2), transcript variant 2, mRNA



161
00800_600_E13
NM_002475

Homo sapiens myosin, light chain 68, alkali, smooth muscle and non-muscle






(MYL6B), mRNA


162
00800_600_J10


163
00800_600_L06
NM_001040134

Homo sapiens paralemmin (PALM), transcript variant 2, mRNA



164
00800_600_P10


165
00800_601_C10


166
00800_601_D06
NM_005861

Homo sapiens STIP1 homology and U-box containing protein 1 (STUB1), mRNA



167
00800_602_B15


168
00800_602_M24
NT_010194

Homo sapiens chromosome 15 genomic contig, reference assembly



169
00800_603_I12
NM_014497

Homo sapiens zinc finger protein 638 (ZNF638), transcript variant 1, mRNA



170
09016_002_E20
NM_004960

Homo sapiens fusion (involved in t(12; 16) in malignant liposarcoma)(FUS)



171
09016_002_J18
NM_000973

Homo sapiens ribosomal protein L8 (RPL8)



172
09016_005_A20
NM_004499

Homo sapiens heterogeneous nuclear ribonucleoprotein A/B (HNRPAB)



173
09016_005_H19
NM_004593

Homo sapiens splicing factor, arginine/serine-rich 10 (SFRS10)



174
09016_005_O21
NM_153649

Homo sapiens tropomyosin 3 (TPM3)



175
09016_008_B04
NM_004494

omo sapiens hepatoma-derived growth factor (high-mobility group protein 1-like)






(HDGF)


176
09016_009_H22
NM_138400

Homo sapiens nucleolar protein with MIF4G domain 1 (NOM1)



177
09016_009_O04
NM_002473

Homo sapiens myosin, heavy chain 9, non-muscle (MYH9)



178
09016_013_E04
NM_012186

Homo sapiens forkhead box E3 (FOXE3)



179
09016_016_M20
NM_020713

Homo sapiens KIAA1196 protein (GM632)



180
09016_017_F21
NM_002473

Homo sapiens myosin, heavy chain 9, non-muscle (MYH9)



181
09016_018_O16
NM_003475

Homo sapiens Ras association (RalGDS/AF-6) domain family 7 (RASSF7)



182
09016_020_A08
NM_002819

Homo sapiens polypyrimidine tract binding protein 1 (PTBP1)



183
09016_020_F03
NM_002819

Homo sapiens polypyrimidine tract binding protein 1 (PTBP1)



184
09016_020_F19
NM_004559

Homo sapiens Y box binding protein 1 (YBX1)



185
09016_021_O08
NM_004559

Homo sapiens Y box binding protein 1 (YBX1)



186
09016_022_D05
NM_004494

Homo sapiens hepatoma-derived growth factor (high-mobility group protein 1-like)






(HDGF)


187
09016_023_A16
NM_004559

Homo sapiens Y box binding protein 1 (YBX1)



188
09016_023_O09
NM_138400

Homo sapiens nucleolar protein with MIF4G domain 1 (NOM1)



189
09016_024_M04
NM_004559

Homo sapiens Y box binding protein 1 (YBX1)



190
09016_028_M09
NM_001034025

Homo sapiens endoplasmic reticulum protein 29 (ERP29)



191
09016_031_C13
NM_033112

Homo sapiens chromosome 6 open reading frame 153 (C6orf153)



192
09016_031_E24
NM_002819

Homo sapiens polypyrimidine tract binding protein 1 (PTBP1)



193
09016_034_D03
NM_004593

omo sapiens splicing factor, arginine/serine-rich 10 (SFRS10)



194
09017_003_E21
NM_021009

Homo sapiens ubiquitin C (UBC)



195
09017_004_G23
NM_001008657

Homo sapiens Treacher Collins-Franceschetti syndrome 1 (TCOF1)



196
09017_012_B14
NM_016257

Homo sapiens hippocalcin like 4 (HPCAL4)



197
09017_015_O07
NM_018690

Homo sapiens apolipoprotein B48 receptor (APOB48R)



198
09017_016_N21
NM_004559

Homo sapiens Y box binding protein 1 (YBX1)



199
09017_019_H17
NM_079421

Homo sapiens cyclin-dependent kinase inhibitor 2D (p19, Inhibits CDK4)






(CDKN2D)


200
09017_020_C19
NM_004494

Homo sapiens hepatoma-derived growth factor (high-mobility group protein






1-like) (HDGF)


201
09017_021_H07
NM_001034025

Homo sapiens endoplasmic reticulum protein 29 (ERP29)



202
09017_022_E05
NM_001012

Homo sapiens ribosomal protein S8 (RPS8)



203
09017_022_G11
NM_014593

Homo sapiens CXXC finger 1 (PHD domain) (CXXC1), mRNA



204
09017_022_N22
NM_001010850

Homo sapiens fusion (involved in t(12; 16) in malignant liposarcoma)






(FUS), transcript variant 2, mRNA


205
09017_027_B02
NM_007158

Homo sapiens cold shock domain containing E1, RNA-binding (CSDE1),






transcript variant 2, mRNA


206
09017_030_I14
NM_001312

Homo sapiens cysteine-rich protein 2 (CRIP2), mRNA



207
09017_030_M06
NM_032251

Homo sapiens coiled-coil domain containing 88 (CCDC88), mRNA



208
09017_032_D09
NM_002228

Homo sapiens jun oncogene (JUN), mRNA



209
09017_032_G02
NM_005354

Homo sapiens jun D proto-oncogene (JUND), mRNA



210
09017_032_O04
NM_022898

Homo sapiens B-cell CLL/lymphoma 11B (zinc finger protein) (BCL11B),






transcript variant 2, mRNA


211
09017_034_L19
NM_005157

Homo sapiens v-abl Abelson murine leukemia viral oncogens homolog 1






(ABL1), transcript variant a, mRNA


212
09017_039_I18
NM_002383

Homo sapiens MYC-associated zinc finger protein (purine-binding






transcription factor) (MAZ), mRNA


213
09017_042_D04
NM_002473

Homo sapiens myosin, heavy chain 9, non-muscle (MYH9), mRNA



214
MyelinBasicProteinAnti-



genfromHumanbrain


215
00800_505_F06
NM_013235

Homo sapiens ribonuclease III, nuclear (RNASEN), mRNA



216
00800_505_I09
NM_001636

Homo sapiens solute carrier family 25 (mitochondrial carrier; adenine






nucleotide translocator), member 6 (SLC25A6), mRNA


217
00800_506_M11
NT_021937

Homo sapiens chromosome 1 genomic contig, reference assembly



218
00800_507_M15
NM_000127

Homo sapiens exostoses (multiple) 1 (EXT1), mRNA



219
00800_508_I24
NM_004854

Homo sapiens carbohydrate sulfotransferase 10 (CHST10), mRNA



220
00800_510_B13


221
00800_510_J11
NW_926918

Homo sapiens chromosome 17 genomic contig, alternate assembly






(based on Celera assembly)


222
00800_512_C01


223
00800_512_O19
NM_006160

Homo sapiens neurogenic differentiation 2 (NEUROD2), mRNA



224
00800_513_E09


225
00800_513_M06
NM_005937

Homo sapiens myeloid/lymphoid or mixed-lineage leukemia (trithorax






homolog, Drosophila); translocated to, 6 (MLLT6), mRNA


226
00800_513_N07
NT_011630

Homo sapiens chromosome X genomic contig, reference assembly



227
00800_514_A15
NM_003824

Homo sapiens Fas (TNFRSF6)-associated via death domain (FADD), mRNA



228
00800_514_H03
XM_001123454
PREDICTED: Homo sapiens GIY-YIG domain containing 2, transcript





variant 1 (GIYD2), mRNA


229
00800_515_C16


230
00800_515_C22


231
00800_518_K18
NM_014851

Homo sapiens kelch-like 21 (Drosophila) (KLHL21), mRNA



232
00800_518_O10
NM_004838

Homo sapiens homer homolog 3 (Drosophila) (HOMER3), mRNA



233
00800_519_A23


234
00800_523_B20
NT_009775

Homo sapiens chromosome 12 genomic contig, reference assembly



235
00800_523_B06
NM_198318

Homo sapiens protein arginine methyltransferase 1 (PRMT1),






transcript variant 3, mRNA


236
00800_523_I13
NM_032333

Homo sapiens chromosome 10 open reading frame 58 (C10orf58), mRNA



237
00800_523_K19


238
00800_523_P18
NM_144576

Homo sapiens coenzyme Q10 homolog A (S. cerevisiae) (COQ10A), mRNA



239
00800_524_A06
XM_001131713
PREDICTED: Homo sapiens similar to HLA class I histocompatibility antigen,





B-18 alpha chain precursor (MHC class I antigen B*18) (LOC730410), mRNA


240
00800_524_C12


241
00800_524_D10
NM_030815

Homo sapiens p53 and DNA damage regulated 1 (PDRG1), mRNA



242
00800_524_E24
NM_016162

Homo sapiens inhibitor of growth family, member 4 (ING4), mRNA



243
00800_524_I01
NM_021727

Homo sapiens fatty acid desaturase 3 (FADS3), mRNA



244
00800_524_K14


245
00800_524_N04
NM_002856

Homo sapiens poliovirus receptor-related 2 (herpesvirus entry mediator B)






(PVRL2), mRNA


246
00800_525_M19
NM_004095

Homo sapiens eukaryotic translation initiation factor-4E binding protein 1






(EIF4EBP1), mRNA


247
00800_526_C01


248
00800_526_D09
NM_006644

Homo sapiens heat shock 105 kDa/110 kDa protein 1 (HSPH1), mRNA



249
00800_526_G11
NT_008413

Homo sapiens chromosome 9 genomic contig, reference assembly



250
00800_528_A16


251
00800_528_D24
NM_052880

Homo sapiens HGFL gene (MGC17330), mRNA



252
00800_528_F07
NM_001015885

Homo sapiens RAE1 RNA export 1 homolog (S. pombe) (RAE1), transcript






variant 2, mRNA


253
00800_528_H06
NM_031157

Homo sapiens heterogeneous nuclear ribonucleoprotein A1 (HNRPA1), transcript






variant 2, mRNA


254
00800_528_M23
NM_001008709

Homo sapiens protein phosphatase 1, catalytic subunit alpha isoform (PPP1CA),






transcript variant 3, mRNA


255
00800_528_M05
NM_001940

Homo sapiens atrophin 1 (ATN1), transcript variant 2, mRNA



256
00800_529_F03
XM_001129992
PREDICTED: Homo sapiens plasticity-related gene 2 (PRG2), mRNA


257
00800_529_M18
NM_030795

Homo sapiens stathmin-like 4 (STMN4), mRNA



258
00800_529_M22
NM_001983

Homo sapiens excision repair cross-complementing rodent repair deficiency,






complementation group 1 (includes overlapping antisense sequence) (ERCC1),





transcript variant 2, mRNA


259
00800_529_O18
NM_021149

Homo sapiens coactosin-like 1 (Dictyostelium) (COTL1), mRNA



260
00800_530_E13
NM_002095

Homo sapiens general transcription factor IIE, polypeptide 2, beta 34 kDa






(GTF2E2), mRNA


261
00800_530_J19
NM_021149

Homo sapiens coactosin-like 1 (Dictyostelium) (COTL1), mRNA



262
00800_532_A06


263
00800_532_L19
NM_012088

Homo sapiens 6-phosphogluconolactonase (PGLS), mRNA



264
00800_533_F22
NM_020710

Homo sapiens leucine rich repeat containing 47 (LRRC47), mRNA



265
00800_533_G14
NM_017542

Homo sapiens pogo transposable element with KRAB domain (POGK), mRNA



266
00800_534_C05


267
00800_536_F02
NM_002660

Homo sapiens phospholipase C, gamma 1 (PLCG1), transcript variant 1, mRNA



268
00800_539_P13


269
00800_540_H17


270
00800_540_K16


271
00800_543_P22


272
00800_546_A20
NM_012088

Homo sapiens 6-phosphogluconolactonase (PGLS), mRNA



273
00800_546_I15
NM_007118

Homo sapiens triple functional domain (PTPRF interacting) (TRIO), mRNA



274
00800_548_A24
NM_173551

Homo sapiens ankyrin repeat and sterile alpha motif domain containing 6






(ANKS6), mRNA


275
00800_548_A05
NM_001031696

Homo sapiens phospholipase D family, member 3 (PLD3), transcript variant 1, mRNA



276
00800_548_B04
NM_016035

Homo sapiens coenzyme Q4 homolog (S. cerevisiae) (COQ4), mRNA



277
00800_548_J12
NM_012398

Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I, gamma






(PIP5K1C), mRNA


278
00800_549_G07
XM_941435
PREDICTED: Homo sapiens hypothetical protein LOC146909, transcript variant 4





(LOC146909), mRNA


279
00800_550_B21
NM_005474

Homo sapiens histone deacetylase 5 (HDAC5), transcript variant 1, mRNA



280
00800_552_D02
NM_004573

Homo sapiens phospholipase C, beta 2 (PLCB2), mRNA



281
00800_552_F09
NM_006768

Homo sapiens BRCA1 associated protein (BRAP), mRNA



282
00800_552_P18
NT_010641

Homo sapiens chromosome 17 genomic contig, reference assembly



283
00800_556_D05
NM_006805

Homo sapiens heterogeneous nuclear ribonucleoprotein A0 (HNRPA0), mRNA



284
00800_557_C02


285
00800_558_A22


286
00800_559_O11
NM_024083

Homo sapiens alveolar soft part sarcoma chromosome region, candidate 1






(ASPSCR1), mRNA


287
00800_560_K09


288
00800_562_M02


289
00800_563_J13
NM_012088

Homo sapiens 6-phosphogluconolactonase (PGLS), mRNA



290
00800_565_C16
NM_005573

Homo sapiens lamin B1 (LMNB1), mRNA



291
00800_565_H12
NT_019197

Homo sapiens chromosome 22 genomic contig, reference assembly



292
00800_566_E12
NM_032019

Homo sapiens histone deacetylase 10 (HDAC10), mRNA



293
00800_566_M21
NW_927284

Homo sapiens chromosome 19 genomic contig, alternate assembly






(based on Celera assembly)


294
00800_569_B07
NM_003180

Homo sapiens synaptotagmin V (SYT5), mRNA



295
00800_569_D11
NM_023009

Homo sapiens MARCKS-like 1 (MARCKSL1), mRNA



296
00800_569_H21
NM_020710

Homo sapiens leucine rich repeat containing 47 (LRRC47), mRNA



297
00800_570_E19
NT_011295

Homo sapiens chromosome 19 genomic contig, reference assembly



298
00800_570_H05
NT_035014

Homo sapiens chromosome 9 genomic contig, reference assembly



299
00800_570_I09
NM_016292

Homo sapiens TNF receptor-associated protein 1 (TRAP1), mRNA



300
00800_574_D01
NM_030795

Homo sapiens stathmin-like 4 (STMN4), mRNA



301
00800_574_E19


302
00800_576_B07
NM_016139

Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 2






(CHCHD2), mRNA


303
00800_577_C12
NM_004295

Homo sapiens TNF receptor-associated factor 4 (TRAF4), transcript variant 1,






mRNA


304
00800_577_J13
NM_006374

Homo sapiens serine/threonine kinase 25 (STE20 homolog, yeast) (STK25), mRNA



305
00800_577_K10
NM_021991

Homo sapiens junction plakoglobin (JUP), transcript variant 2, mRNA



306
00800_577_L03
XM_001129992
PREDICTED: Homo sapiens plasticity-related gene 2 (PRG2), mRNA


307
00800_J77_O11
NM_002825

Homo sapiens pleiotrophin (heparin binding-growth factor 8, neurite growth-






promoting factor 1) (PTN), mRNA


308
00800_578_B01


309
00800_578_O13
NM_004559

Homo sapiens Y box binding protein 1 (YBX1), mRNA



310
00800_578_O22


311
00800_579_G06
NT_007933

Homo sapiens chromosome 7 genomic contig, reference assembly



312
00800_579_L22
NM_021149

Homo sapiens coactosin-like 1 (Dictyostelium) (COTL1), mRNA



313
00800_579_O08


314
00800_579_P11
NM_003131

Homo sapiens serum response factor (c-fos serum response element-binding






transcription factor) (SRF), mRNA


315
00800_581_C14
NM_001003801

Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of






chromatin, subfamily d, member 3 (SMARCD3), transcript variant 3, mRNA


316
00800_581_G17
NM_001003801

Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of






chromatin, subfamily d, member 3 (SMARCD3), transcript variant 3, mRNA


317
00800_581_L04
MM 031454

Homo sapiens selenoprotein O (SELO), mRNA



318
00800_582_B01


319
00800_582_H11
NM_152411

Homo sapiens zinc finger protein 786 (ZNF788), mRNA



320
00800_582_K12
NM_001013725

Homo sapiens hypothetical gene supported by BC044942 (LOC441268), mRNA



321
00800_582_L08
NM_005736

Homo sapiens ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)






(ACTR1A), mRNA


322
00800_584_D17
NM_002613

Homo sapiens 3-phosphoinositide dependent protein kinase-1 (PDPK1), transcript






variant 1, mRNA


323
00800_584_H24
NM_020799

Homo sapiens STAM binding protein-like 1 (STAMBPL1), mRNA



324
00800_584_H06
NM_021149

Homo sapiens coactosin-like 1 (Dictyostelium) (COTL1), mRNA



325
00800_585_H10
NM_001002261

Homo sapiens zinc finger, FYVE domain containing 27 (ZFYVE27), transcript






variant 1, mRNA


326
00800_585_H18
NT_023133

Homo sapiens chromosome 5 genomic contig, reference assembly



327
00800_586_O09


328
00800_588_P23
XM_940198
PREDICTED: Homo sapiens hypothetical LOC644096 (LOC644096), mRNA


329
00800_589_L09
NT_011109

Homo sapiens chromosome 19 genomic contig, reference assembly



330
00800_589_N14
NM_002751

Homo sapiens mitogen-activated protein kinase 11 (MAPK11), mRNA



331
00800_590_C08
NM_006035

Homo sapiens CDC42 binding protein kinase beta (DMPK-like) (CDC42BPB), mRNA



332
00800_590_H08
NM_005707

Homo sapiens programmed cell death 7 (PDCD7), mRNA



333
00800_590_K13
NM_012226

Homo sapiens nucleotide binding protein 2 (MinD homolog, E. coli) (NUBP2),






mRNA


334
00800_590_L18
NM_005726

Homo sapiens Ts translation elongation factor, mitochondrial (TSFM), mRNA



335
00800_591_G04
NM_006640

Homo sapiens septin 9 (SEPT9), mRNA



336
00800_591_G07


337
00800_591_K22
NM_001024807

Homo sapiens amyloid beta (A4) precursor-like protein 1 (APLP1), transcript






variant 1, mRNA


338
00800_594_P22
NM_030815

Homo sapiens p53 and DNA damage regulated 1 (PDRG1), mRNA



339
00800_595_L06
NW_926561

Homo sapiens chromosome 16 genomic contig, alternate assembly






(based on Celera assembly)


340
00800_596_C18
NM_001009998

Homo sapiens single stranded DNA binding protein 4 (SSBP4), transcript






variant 2, mRNA


341
00800_596_F15


342
00800_596_J07
NM_001031684

Homo sapiens splicing factor, arginine/serine-rich 7, 35 kDa (SFRS7), mRNA



343
00800_597_L02
NM_018083

Homo sapiens zinc finger protein 358 (ZNF358), mRNA



344
00800_597_O20
NT_032977

Homo sapiens chromosome 1 genomic contig, reference assembly



345
00800_598_D04
NM_003768

Homo sapiens phosphoprotein enriched in astrocytes 15 (PEA15), mRNA



346
00800_598_I01
NM_030815

Homo sapiens p53 and DNA damage regulated 1 (PDRG1), mRNA



347
00800_598_I19
NM_004559

Homo sapiens Y box binding protein 1 (YBX1), mRNA



348
00800_598_N16
NM_004559

Homo sapiens Y box binding protein 1 (YBX1), mRNA



349
00800_600_O12
NM_006513

Homo sapiens seryl-tRNA synthetase (SARS), mRNA



350
00800_601_A11
NM_016162

Homo sapiens inhibitor of growth family, member 4 (ING4), mRNA



351
00800_601_B18
NM_032333

Homo sapiens chromosome 10 open reading frame 58 (C10orf58), mRNA



352
00800_601_J21
NW_926918

Homo sapiens chromosome 17 genomic contig, alternate assembly






(based on Celera assembly)


353
00800_601_K12
NM_003333

Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1






(UBA52), transcript variant 2, mRNA


354
00800_633_J02


355
09016_001_K02
NM_170708

Homo sapiens lamin A/C (LMNA)



356
09016_002_C13
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2



367
09016_003_I24
NM_015190

Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 9 (DNAJC9)



358
09016_003_P06
NM_002954

Homo sapiens ribosomal protein S27a (RPS27A)



359
09016_004_L21
NM_015190

Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 9 (DNAJC9)



360
09016_005_O03
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



361
09016_006_J18
NM_006796

Homo sapiens AFG3 ATPase family gene 3-like 2 (yeast) (AFG3L2)



362
09016_006_P23
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



363
09016_017_L21
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



364
09016_019_C05
NM_002473

Homo sapiens myosin, heavy chain 9, non-muscle (MYH9)



365
09016_021_O07
NM_000386

Homo sapiens bleomycin hydrolase (BLMH



366
09016_024_G16
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



367
09016_024_L06
NM_005572

Homo sapiens lamin A/C (LMNA), transcript variant 2



368
09016_025_E24
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



369
09016_030_B07
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



370
09016_030_K04
NM_005572

Homo sapiens lamin A/C (LMNA), transcript variant 2



371
09016_034_E04
NM_015190

Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 9 (DNAJC9)



372
09017_001_B21
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



373
09017_002_K04
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



374
09017_002_P24
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



375
09017_003_B05
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



376
09017_008_D17
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



377
09017_008_I02
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



378
09017_014_I23
NM_020529

Homo sapiens nuclear factor of kappa light polypeptide gene enhancer






in B-cells inhibitor, alpha (NFKBIA)


379
09017_016_J17
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



380
09017_018_J21
NM_002954

Homo sapiens ribosomal protein S27a (RPS27A)



381
09017_019_E20
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



382
09017_019_H05
NM_015711

Homo sapiens glioma tumor suppressor candidate region gene 1






(GLTSCR1),


383
09017_019_L21


384
09017_020_C09
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2)



385
09017_021_L03
NM_006360

Homo sapiens PCI domain containing 1 (herpesvirus entry mediator) (PCID1)



386
09017_022_F16
NM_012292

Homo sapiens histocompatibility (minor) HA-1 (HMHA1)



387
09017_023_E01
NM_002954

Homo sapiens ribosomal protein S27a (RPS27A), mRNA



388
09017_024_A21
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2), mRNA



389
09017_024_C07
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2), mRNA



390
09017_024_K03
NM_002954

Homo sapiens ribosomal protein S27a (RPS27A), mRNA



391
09017_025_K17
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2), mRNA



392
09017_026_L23
NM_001025598

Homo sapiens Rho GTPase activating protein 30 (ARHGAP30), transcript






variant 1, mRNA


393
09017_032_C07
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2), mRNA



394
09017_036_G03
NM_002473

Homo sapiens myosin, heavy chain 9, non-muscle (MYH9), mRNA



395
09017_019_L21


396
00800_505_H09


397
00800_523_E11
NM_020655

Homo sapiens junctophilin 3 (JPH3), mRNA



398
00800_523_E04
NM_147158

Homo sapiens opioid receptor, sigma 1 (OPRS1), transcript variant 3, mRNA



399
00800_523_G05
NM_002808

Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 3






(PSMD3), mRNA


400
00800_523_L04
XM_939744
PREDICTED: Homo sapiens similar to cytoplasmic beta-actin (LOC644961), mRNA


401
00800_526_A09


402
00800_526_O19
NM_178148

Homo sapiens solute carrier family 35, member B2 (SLC35B2), mRNA



403
00800_528_J11


404
00800_529_D17


405
00800_530_J04
NM_014902

Homo sapiens discs, large (Drosophila) homolog-associated






protein 4 (DLGAP4), transcript variant 1, mRNA


406
00800_534_K03
NT_011109

Homo sapiens chromosome 19 genomic contig, reference assembly



407
00800_538_I10


408
00800_538_J05
NT_113943

Homo sapiens chromosome 17 genomic contig, reference assembly



409
00800_550_C21
NM_005474

Homo sapiens histone deacetylase 5 (HDAC5), transcript variant 1, mRNA



410
00800_554_C07


411
00800_554_M18
NT_029419

Homo sapiens chromosome 12 genomic contig, reference assembly



412
00800_557_I16
NM_005442

Homo sapiens eomesodermin homolog (Xenopus laevis)






(EOMES), mRNA


413
00800_558_I15
NT_005416

Homo sapiens chromosome 2 genomic contig, reference assembly



414
00800_564_O09


415
00800_572_J16
NM_032014

Homo sapiens mitochondrial ribosomal protein S24 (MRPS24), nuclear gene






encoding mitochondrial protein, mRNA


416
00800_574_H13
NT_011109

Homo sapiens chromosome 19 genomic contig, reference assembly



417
00800_578_E04
NM_002714

Homo sapiens protein phosphatase 1, regulatory subunit 10 (PPP1R10), mRNA



418
00800_579_P03


419
00800_580_P08
NM_002383

Homo sapiens MYC-associated zinc finger protein (purine-binding transcription






factor) (MAZ), mRNA


420
00800_581_D11


421
00800_581_J21


422
00800_582_O11


423
00800_582_P05
NM_001005366

Homo sapiens F-box and leucine-rich repeat protein 10 (FBXL10), transcript






variant 2, mRNA


424
00800_583_B14
NM_005984

Homo sapiens solute carrier family 25 (mitochondrial carrier; citrate transporter),






member 1 (SLC25A1), mRNA


425
00800_583_D23
NM_016930

Homo sapiens syntaxin 18 (STX18), mRNA



426
00800_583_G13
NM_005276

Homo sapiens glycerol-3-phosphate dehydrogenase 1 (soluble) (GPD1), mRNA



427
00800_583_K19
NM_015980

Homo sapiens HMP19 protein (HMP19), mRNA



428
00800_583_O03
NM_006009

Homo sapiens tubulin, alpha 3 (TUBA3), mRNA



429
00800_584_G03
NT_026437

Homo sapiens chromosome 14 genomic contig, reference assembly



430
00800_584_O14
NM_024671

Homo sapiens zinc finger protein 768 (ZNF768), mRNA



431
00800_585_K18
NT_016354

Homo sapiens chromosome 4 genomic contig, reference assembly



432
00800_585_N24
NM_014405

Homo sapiens calcium channel, voltage-dependent, gamma subunit 4 (CACNG4), mRNA



433
00800_586_A24
NM_004209

Homo sapiens synaptogyrin 3 (SYNGR3), mRNA



434
00800_586_H17


435
00800_590_P01
NM_016257

Homo sapiens hippocalcin like 4 (HPCAL4), mRNA



438
00800_591_C18
NM_015125

Homo sapiens capicua homolog (Drosophila) (CIC), mRNA



437
00800_591_F21
XM_926195
PREDICTED: Homo sapiens similar to Myc-associated zinc ringer protein (MAZI)





(Purine-binding transcription factor) (Pur-1) (ZF87) (ZIFB7) (LOC642773), mRNA


438
00800_592_I20


439
00800_592_K06
NM_001069

Homo sapiens tubulin, beta 2A (TUBB2A), mRNA



440
00800_595_A14
NM_022823

Homo sapiens fibronectin type III domain containing 4 (FNDC4), mRNA



441
00800_595_H19
NM_001005362

Homo sapiens dynamin 2 (DNM2), transcript variant 4, mRNA



442
00800_597_B24
NM_017789

Homo sapiens sema domain, immunoglobulin domain (Ig), transmembrane domain






(TM) and short cytoplasmic domain, (semaphorin) 4C (SEMA4C), mRNA


443
00800_597_C09
NM_033647

Homo sapiens helicase (DNA) B (HELB), mRNA



444
00800_597_G24


445
00800_597_I14
NM_016592

Homo sapiens GNAS complex locus (GNAS), transcript variant 4, mRNA



446
00800_597_K23
XM_001128735
PREDICTED: Homo sapiens zinc finger protein 154 (pHZ-92) (ZNF154), mRNA


447
00800_597_N16
NT_011515

Homo sapiens chromosome 21 genomic contig, reference assembly



448
00800_599_C17
NM_005654

Homo sapiens nuclear receptor subfamily 2, group F, member 1 (NR2F1), mRNA



449
00800_599_I11
NM_003827

Homo sapiens N-ethylmaleimide-sensitive factor attachment protein, alpha






(NAPA), mRNA


450
00800_599_N21
NM_001069

Homo sapiens tubulin, beta 2A (TUBB2A), mRNA



451
00800_599_P10
NM_015125

Homo sapiens capicua homolog (Drosophila) (CIC), mRNA



452
00800_600_C17
NM_030567

Homo sapiens proline rich 7 (synaptic) (PRR7), mRNA



453
00800_600_C22
NT_010542

Homo sapiens chromosome 16 genomic contig, reference assembly



454
00800_600_D09
NM_018200

Homo sapiens high-mobility group 20A (HMG20A), mRNA



455
00800_600_I08


456
00800_600_K05
NT_026446

Homo sapiens chromosome 15 genomic contig, reference assembly



457
00800_601_G06
NM_001002246

Homo sapiens APC11 anaphase promoting complex subunit 11 homolog (yeast)






(ANAPC11), transcript variant 4, mRNA


458
00800_602_A21
NM_001002029

Homo sapiens complement component 4B (Childo blood group) (C4B), mRNA



459
00800_602_E13


460
00800_602_N08
NT_028392

Homo sapiens chromosome 20 genomic contig, reference assembly



461
00800_603_N12
NW_923907

Homo sapiens chromosome 8 genomic contig, alternate assembly






(based on Celera assembly)


462
00800_603_O13


463
00800_533_J02
NM_000992

Homo sapiens ribosomal protein L29 (RPL29), mRNA



464
09016_001_O18
NM_003655

Homo sapiens chromobox homolog 4 (Pc class homolog, Drosophila)






(CBX4), mRNA


465
09016_003_D06
NM_024309

Homo sapiens TNFAIP3 interacting protein 2 (TNIP2), mRNA



466
09016_005_D22
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2), mRNA



467
09016_005_G11
NT_004836

Homo sapiens chromosome 1 genomic contig, reference assembly



468
09016_005_P19
NT_021937

Homo sapiens chromosome 1 genomic contig, reference assembly



469
09016_007_F19
NM_006753

Homo sapiens surfeit 6 (SURF6), mRNA



470
09016_007_P19
NM_000972

Homo sapiens ribosomal protein L7a (RPL7A), mRNA



471
09016_008_D06
NT_011255

Homo sapiens chromosome 19 genomic contig, reference assembly



472
09016_011_K20
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2), mRNA



473
09016_014_N10
NM_002405

Homo sapiens manic fringe homolog (Drosophila) (MFNG), mRNA



474
09016_016_I21
NT_033903

Homo sapiens chromosome 11 genomic contig, reference assembly



475
09016_019_M11
NM_032251

Homo sapiens coiled-coil domain containing 88 (CCDC88), mRNA



476
09016_021_K09
NW_925517

Homo sapiens chromosome 13 genomic contig, alternate assembly






(based on Celera assembly)


477
09016_022_F21
NM_001010850

Homo sapiens fusion (involved in t(12; 16) in malignant liposarcoma)






(FUS), transcript variant 2, mRNA


478
09016_022_O01
NM_023008

Homo sapiens hypothetical protein FLJ12949 (FLJ12949), transcript






variant 1, mRNA


479
09016_025_K08
NT_026437

Homo sapiens chromosome 14 genomic contig, reference assembly



480
09016_028_N19
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2), mRNA



481
09016_031_H22
NT_011255

Homo sapiens chromosome 19 genomic contig, reference assembly



482
09016_031_J04
NM_002360

Homo sapiens v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)






(MAFK), mRNA


483
09016_031_J22
NM_004593

Homo sapiens splicing factor, arginine/serine-rich 10 (transformer 2 homolog,







Drosophila) (SFRS10), mRNA



484
09016_033_P14
NM_018690

Homo sapiens apolipoprotein B48 receptor (APOB48R), mRNA



485
09016_038_K20
NT_022184

Homo sapiens chromosome 2 genomic contig, reference assembly



486
09016_038_O04
NM_002154

Homo sapiens heat shock 70 kDa protein 4 (HSPA4), transcript variant 1, mRNA



487
09017_001_D24
NM_000701

Homo sapiens ATPase, Na+/K+ transporting, alpha 1 polypeptide (ATP1A1),






transcript variant 1, mRNA


488
09017_002_B14
NM_030665

Homo sapiens retinoic acid induced 1 (RAI1), mRNA



489
09017_003_C06
NW_924951

Homo sapiens chromosome 11 genomic contig, alternate assembly






(based on Celera assembly)


490
09017_003_I21
NT_004487

Homo sapiens chromosome 1 genomic contig, reference assembly



491
09017_004_I18


492
09017_004_I24
NT_026970

Homo sapiens chromosome 2 genomic contig, reference assembly



493
09017_005_A07
NT_022184

Homo sapiens chromosome 2 genomic contig, reference assembly



494
09017_006_B18
NM_001035518

Homo sapiens centrosomal protein 250 kDa (CEP250), transcript variant 2, mRNA



495
09017_007_J20
NT_010783

Homo sapiens chromosome 17 genomic contig, reference assembly



496
09017_007_K23
NT_011255

Homo sapiens chromosome 19 genomic contig, reference assembly



497
09017_008_K16
NM_020524

Homo sapiens pre-B-cell leukemia transcription factor interacting protein 1






(PBXIP1), mRNA


498
09017_012_F22
NM_023008

Homo sapiens hypothetical protein FLJ12949 (FLJ12949), transcript variant 1,






mRNA


499
09017_013_D24
NM_020524

Homo sapiens pre-B-cell leukemia transcription factor Interacting protein 1






(P8XIP1), mRNA


500
09017_013_E08
NM_020524

Homo sapiens pre-B-cell leukemia transcription factor interacting protein 1






(PBX1P1), mRNA


501
09017_013_N01
NT_028437

Homo sapiens chromosome 14 genomic contig, reference assembly



502
09017_014_N01
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2), mRNA



503
09017_015_F06
NM_023008

Homo sapiens hypothetical protein FLJ12949 (FLJ12949), transcript variant 1,






mRNA


504
09017_016_C21
NM_002952

Homo sapiens ribosomal protein S2 (RPS2), mRNA



505
09017_016_J19
NM_012138

Homo sapiens apoptosis antagonizing transcription factor (AATF), mRNA



506
09017_017_M18
NM_020524

Homo sapiens pre-B-cell leukemia transcription factor interacting protein 1






(PBXIP1), mRNA


507
09017_019_N07
NT_011520

Homo sapiens chromosome 22 genomic contig, reference assembly



508
09017_019_N10
NM_023008

Homo sapiens hypothetical protein FLJ12949 (FLJ12949), transcript variant 1,






mRNA


509
09017_020_O16
NM_005572

Homo sapiens lamin A/C (LMNA), transcript variant 2, mRNA



510
09017_021_G14
NT_010783

Homo sapiens chromosome 17 genomic contig, reference assembly



511
09017_021_H12
NM_173551

Homo sapiens ankyrin repeat and sterile alpha motif domain containing 6 (ANKS6),






mRNA


512
09017_023_A19
NT_011255

Homo sapiens chromosome 19 genomic contig, reference assembly



513
09017_023_L01
NT_004559

Homo sapiens chromosome 1 genomic contig, reference assembly



514
09017_023_N16
NM_001400

Homo sapiens endothelial differentiation, sphingolipid G-protein-coupled






receptor, 1 (EDG1), mRNA


515
09017_024_D07
NT_022517

Homo sapiens chromosome 3 genomic contig, reference assembly



516
09017_024_G15
NT_021937

Homo sapiens chromosome 1 genomic contig, reference assembly



517
09017_025_P19
NM_004418

Homo sapiens dual specificity phosphatase 2 (DUSP2), mRNA



518
09017_026_C11
NM_012138

Homo sapiens apoptosis antagonizing transcription factor (AATF), mRNA



519
09017_026_C13
NT_011109

Homo sapiens chromosome 19 genomic contig, reference assembly



520
09017_026_J08
NT_022184

Homo sapiens chromosome 2 genomic contig, reference assembly



521
09017_028_O09
NT_033903

Homo sapiens chromosome 11 genomic contig, reference assembly






coiled-coil domain containing 88


522
09017_029_I07
XM_001134280
PREDICTED: Homo sapiens v-maf musculoaponeurotic fibrosarcoma oncogene homolog





(avian), transcript variant 2 (MAF), mRNA


523
09017_033_C14
NM_001034025

Homo sapiens endoplasmic reticulum protein 29 (ERP29), transcript variant 2,






mRNA


524
09017_035_P22
NM_020524

Homo sapiens pre-B-cell leukemia transcription factor interacting protein 1






(PBXIP1), mRNA


525
09017_037_B10
NM_016111

Homo sapiens TEL2, telomere maintenance 2, homolog (S. cerevisiae)






(TELO2), mRNA


526
09017_039_E14
NM_138639

Homo sapiens BCL2-like 12 (proline rich) (BCL2L12), transcript variant 1, mRNA



527
09017_009_B10
NM_001025100

Homo sapiens myelin basic protein (MBP), transcript variant 8, mRNA









Claims
  • 1. A method for the diagnosis of multiple sclerosis, comprising determining at least one marker sequence of a cDNA comprising a sequence selected from the group SEQ 1-395 or respectively a protein coding therefor or respectively a partial sequence or fragment thereof from a patient to be examined.
  • 2. The method of claim 1, wherein at least 2 to 5 or 10, preferably 30 to 50 marker sequences or 50 to 100 or more marker sequences from a patient to be examined are determined.
  • 3. The method of claim 1, wherein SEQ 1-20 or SEQ 21-50 or SEQ 51-100 or respectively a protein coding therefor or respectively a pmiial sequence or a fragment thereof is determined from a patient to be examined are determined.
  • 4. The method of claim 1, wherein the determination is carried out by means of in vitro diagnosis.
  • 5. The method of claim 1, wherein the marker sequences are applied onto a solid support, in particular a filter, a membrane, a magnetic or fluorophore-labeled bead, a silica wafer, glass, metal, ceramics, plastics, a chip, a target for mass spectrometry or a matrix.
  • 6. The method of claim 1, comprising a. contacting a solid support having applied thereon at least one marker sequence of a cDNA selected from the group SEQ 1-395 or respectively a protein coding therefor or respectively a partial sequence or fragment thereof, with body fluid or tissue extract of a patient; andb. detecting an interaction of the body fluid or tissue extract with the marker sequences on the solid support.
  • 7. The method of claim 1, wherein the cDNA comprises the sequence set forth in SEQ ID NO: 78.
  • 8. A method for the stratification, in particular risk stratification or therapy control of a patient with multiple sclerosis, comprising determining at least one marker sequence of a cDNA selected from the group SEQ 1-395 or respectively a protein coding therefor or respectively a partial sequence or fragment thereof from a patient to be examined.
  • 9. The method according to claim 8, wherein the stratification or the therapy control covers decisions for the treatment and therapy of the patient, in particular the hospitalization of the patient, the use, effect and/or dosage of one or more drugs, a therapeutic measure or the monitoring of a course of the disease and the course of therapy, etiology or classification of a disease together with prognosis.
  • 10. The method according to claim 8, wherein the cDNA comprises the sequence set forth in SEQ ID NO: 78.
  • 11. An arrangement of marker sequences containing at least one marker sequence of a cDNA selected from the group SEQ 1-395 or respectively a protein coding therefor.
  • 12. The arrangement according to claim 11, characterized in that at least 2 to 5 or 10, preferably 30 to 50 marker sequences or 50 to 100 or more marker sequences are contained.
  • 13. The arrangement according to claim 11, characterized in that the marker sequences are present as clones.
  • 14. The arrangement according to claim 11, characterized in that the marker sequences are applied to a solid support.
  • 15. The arrangement according to claim 11, wherein the cDNA comprises the sequence set forth in SEQ ID NO: 78.
Priority Claims (1)
Number Date Country Kind
102007041657.3 Sep 2007 DE national
RELATED APPLICATIONS

This application is a continuation of application Ser. No. 12/676,178, filed Jun. 21, 2010, and the entire contents of which is incorporated by reference herein. Application Ser. No. 12/676,178 is a national stage application (under 35 U.S.C. §371) of PCT/DE2008/001546, filed Sep. 3, 2008, and claims the benefit of German application 102007041657.3, filed Sep. 3, 2007.

Continuations (1)
Number Date Country
Parent 12676178 Jun 2010 US
Child 14453340 US