The present invention is related to a method and device for measuring chemical ion concentration. In particular the present invention may be used to remove noise from a signal output from a chemical sensor such as an ion sensitive field effect transistor (ISFET).
In any chemical measurement systems, the chemical noise, such as thermal noise, site bonding and dissociation are dominant over the electrical noise in interfacing circuits. Moreover, these noises usually spread in all frequency spectrum or overlap with the signal spectrum. Therefore they cannot be removed by following circuit techniques, such as filters. With an ISFET pH measurement system, chemical noise due to Brownian motion and drift, which is a flicker noise in spectrum, significantly degrades the measurement accuracy, as the drift and thermal noise overlap with the slow changing pH signal.
Therefore, in order to enhance the measurement accuracy, one has to boost the signal to noise ratio by either enhancing the signal magnitude or using a feedback system to minimize noise within the open loop. However, due the speed and sizing requirement in the state of the art Lab-on-Chip technique, signal magnitude is constrained by the system scale. Moreover in real-time detection systems, it is unrealistic to control the volume of target samples.
Additionally, it is preferable that the chemical environment is stably maintained. This is because the chemical agent may need a particular chemical condition to keep active and because measurement accuracy also depends on environmental constants, such as pH.
For these reasons, a detection system with noise reduction capability is desirable in chemical measurement systems, especially in real-time or portable devices. In order to reduce the in-loop chemical noise mainly introduced by the interface of the electrolyte-solid surface, the inventors have developed a feedback system similar to a sigma-delta modulation in data conversion of electrical systems.
According to a first aspect of the invention there is provided a method of measuring an ion concentration of a sample, comprising the steps of: exposing a chemical sensor to the sample to provide an electrical output signal representing said ion concentration; calculating a feedback value as the difference between the output signal and a setpoint; providing the feedback value to a titrator exposed to the sample to release or absorb a quantity of ions to the sample; and deriving an ion concentration result from said electrical output signal.
The step of deriving an ion concentration result from said electrical output signal may involve deriving the result directly or indirectly from the electrical output signal.
According to a second aspect of the invention there is provided a device for measuring ion concentration of a sample, the device comprising a chemical sensor and chemical titrator exposed to the sample, wherein an electrical output signal from the chemical sensor is coupled to the titrator with feedback means.
Further preferred aspects are set out in the dependent claims.
Specific embodiments of the invention will now be described by way of example only with reference to the accompanying figures:
In a system comprising the invention, there is a fluid having a chemical concentration of interest, a sensor to detect the chemical, a control system and a feedback mechanism for changing the chemical concentration of the fluid. The control system provides a noise shaping filter to ensure that variations in concentration occur at high frequencies instead of lower frequencies.
In a preferred embodiment of the system, the fluid is contained within a microfluidic device and an ion concentration is sensed by an ISFET to produce an electrical output signal. The control system processes the signal, compares the signal to a setpoint to calculate an error signal, and converts the error signal to a quantity of charge. The charge is provided to a titrator which feeds back this charge as an ion flux into the chemical environment to correct the error. A PWM (pulse width modulation) processor is used to operate the titrator and minimize the leakage. A potentialstat is used to maintain the stability of the electrolyte potential.
An overall control system of a preferred embodiment is shown in
The detection system uses an ISFET sensor with a conventional source drain follower circuit. The sensor's threshold voltage is modulated by the concentration of hydrogen ions. The source drain follower biases the transistor and monitors the source as the output.
In
The pH processing system includes pH-to-charge conversion and pH control. This system calculates the amount of charge need to attain a preset pH value from the measured pH results. This conversion is calculated by an integrated circuit or an external PC or electronic controller, according to known chemical diffusion coefficients and the reaction chamber volume.
The titrator system may comprise: a noble metal electrode such as platinum, which generates hydrogen ions by providing a charge to the electrolyte; a counter electrode, which is part of the potentiostat, to balance the charge in a testing environment and generate OH (hydroxide); and a Sigma Delta PWM controller to switch the titrator between 3 levels, in order to minimize the error, reduce the leakage and realize on-chip operation.
In a preferred embodiment a potentiostat is used to counterbalance the potential change due to the titrator voltage and modulate the electrolyte voltage potential by an externally set value. It consists of three electrodes, a working electrode, a counter electrode and a reference electrode.
A low pass filter before the measurement output of this system attenuates high frequency noise introduced by the PWM controller and oversampling. This may be a digital decimation filter or analogue low pass filter.
The measurement environment is where a chemical reaction may occur, producing a given type of ions, which ions are detected by the chemical sensor. This environment is typically a microfluidic chamber or well provided to the sensor surface. The ionic charge generated by both the chemical reaction and titrator will be integrated into an ionic concentration that is measured by the sensor.
The total charge needed to maintain a constant pH value is given by:
C
in=(pHset−pHmeasured)×V+CD (1)
Where Cin is the input charge required for feedback, pHset is the preset target pH value, and pHmeasured is the pH value measured by the ISFETs, V is the effective volume and CD is the correction due to the diffusion effect.
The PWM control scheme is realized by a sigma-delta modulator as well, as illustrated in
Considering a sample-based modulator, we have:
O(n)=I(n−1)+n(n)−n(n−1) (2)
Where O(n) is the output of the current state, I(n−1) is the input of last state, n(n) is the noise of current state. It indicates that the noise has been differentiated without any reduction of input. Thereby, the signal to noise ratio is enhanced.
In a chemical measurement system, noise is added to the chemical environment. By using a feedback system, the chemical noise added in the open loop can be differentiated.
The diffusion of hydrogen ions is replaced by an integrator, according to:
C
R(0,t)=(πDR)−1/2∫0tf(τ)(t−τ)−1/2dτ (3)
In preferred embodiments the measurement sample frequency is 1 k Hz, and the PWM frequency at 100 k Hz.
Features of Preferred Embodiments:
Detection is completed by a sensing-modulating system, rather than conventional open-loop measurement. Chemical signals are sensed and fed back into the chemical environment to modulate the measurement, in order to get accurate results.
Due to the feedback titrator and transfer function of the electrolyte, the signal is integrated over the entire system, and any noise added in the open-loop measurement system becomes differentiated. This function is completed by a Sigma-Delta modulation.
Normal feedback systems in chemical measurement system only deal with the electrical signal. In the present system, the electrical signal will be transformed into a chemical variable and part of the feedback system. In this case, the diffusion and accumulation effect of chemical ions, acts as a low pass filter or integrator to attenuate the noise.
Further details of preferred embodiments and results are as follows.
The proposed chemical SDM has a similar structure to a conventional electronic SDM: the ideal electronic integrator or the in-loop low pass filter (LPF) is replaced by the chemical integrator, which is essentially the intrinsic chemical transfer function due to ion diffusion and accumulation; the electronic negative feedback is realized by a titrator; the digital quantizer is replaced by the chemical sensors, e.g. ISFETs. Therefore the Delta modulator (differentiator) is established by the feedback of the chemical ions and the Sigma modulator is established by the ion concentration profile.
Considering a simple first order modulator with constant chemical ion input, we can have the chemical output concentration given by:
Where the J is the input ion flux replacing the electronic voltage input, the D is the chemical noise replacing the quantization or electronic noise, n is the sampling index.
There are two benefits from this implementation shown in Eq. (4): the signal is boosted by oversampling. In fact due to the intrinsic of chemical property, it provides extra boost for the pH measurement. The pH change summation provides a multiply effect for the total ion concentration change; second, the noise shaping can be simply achieved by oversampling the chemical signal. This system realizes a LPF for pH change and HPF (High Pass Filter) for drift and circuitry noise. The chemical reaction is essentially a slow-changing signal, while the in-band noise is mainly the chemical drift, therefore, with oversampling, the drift will be differentiated without attenuating the chemical signal.
It also should be noted that compared to conventional open-loop measurement, the chemical change rate per sample is measured rather than the absolute pH value across entire measurement. Instead of a two point measurement, this system can track the reaction rate with minimized low frequency noise. This also provides the other benefit for experiments starting from pH 7, because in either high or low pH environment, a constant ion change will give smaller pH variation, which might not be detectable from an openloop measurement with high noise level.
B. Continuous titration feedback The negative feedback of a chemical signal is realized by a titration system. The titrator for ISFETs has been used for open-loop determination of pH value by constant current biasing, where the elapsed time was recorded as the indication of titration. However, to achieve dynamic feedback control, a charge based titration is required to delivery designated amount of ions to the chemical environment during each titration time windows.
The core part of the proposed system is the realization of a chemical integrator for hydrogen ions. By examining the diffusion and titration mechanism of chemical environment, the integration can be obtained from intrinsic ion diffusion/accumulation behaviour. Considering only the diffusion effect, the concentration change at origin where the ion flux initiates can be derived as:
C
R(0,t)=(πDR)−1/2∫Otf(τ)(t−τ)−1/2dτ(5)
where the DR is the diffusion coefficient of ion, the f(τ) is the constant flux generated either by external bulk environment or by titration. What we can find is that the chemical ion diffusion itself provides an intrinsic “chemical integrator”. Alternatively, to further model the chemical interface, we assume that the concentration distribution is consistent along the radial direction, we can have a one-dimension 2nd order ficsher's law by a single dimension partial derivative equation, given by:
Where the r stands for the radius scale and ′ is the electric filed.
We used the MATLAB ODE tool box to solve this equation by using a constant titration current (chemical flux), shown in
The step and pulse response of this chemical integrator are further proved by the measurement on a chemical sensor with specific titration input, shown in
The entire system is shown in
For closed loop measurement, the input signal is tracked by a stepped output response, which corresponds to each ion change step. Since the SDM operates at a low sample rate, the chemical signal is boosted from 0.0005 pH/step to 0.05 pH step, this can be further enhanced by lowering the sampling rate. Moreover the drift and low frequency noise, which is dominant in the open-loop measurement, are differentiated, providing a significant increase of SNR. Although residual noise or spikes in high spectrum cannot be fully attenuated, it has a minimized effect on the low frequency chemical signal.
The measurement and feedback is repeated at regular intervals. For many systems and reactions to be monitored an interval on the order of a few seconds is sufficient and allows averaging of measurements and titrations. The interval is preferably less than 20 seconds, less than 10 seconds, or less than 6 seconds.
A system embodying the invention is implemented using ISFETs and an external read-out and processing circuitry. Furthermore, to minimize non-ideal effects such as the potential induced by the Faradaic impedance, some extra processing steps and circuit implementations have been designed, which are detailed below.
a. Sensor and Titrator
To demonstrate the proposed system, both custom-made and CMOS ISFETs devices were used as the chemical transducer The custom-made Sentron ISFETs typically drift around 1-2 mV/hr, while CMOS-based ISFETs have a drift on the order of 10 mV/hr.
Two integrated titrators with deposited gold and discrete platinum electrodes were used in the following experiments, with a maximum titration current of 100 uA.
In order to deliver a specific amount of ions into the electrolyte within a short time window, the titrator should be driven by a controlled current source, however, with a varying potential due to electrolyte interface change. This is not realistic in some electric field sensitive measurements, moreover the extra potential drop induced by current pulses can introduce measurement error, which could cause system instability. Therefore, a PWM based charge delivery system may be used as shown in
A constant voltage source (Vout) biases the pair of working/counter electrodes in a designated polarity; the current flowing through the working electrodes is measured and integrated to provide the total charge within a certain period. For each sampling-feedback period, there is a titration stage and the idle stage. In the idle stage, all the electrodes are set to either ground or floating, to establish a constant electrolyte potential. After a certain settling time, the ISFETs readings are taken, and the feedback charge is calculated as the reference for the next stage (line with diamonds) based on the initial output level of the chemical sensor. The titration stage is divided into small fragments, in each fragment, the voltage on the WE or CE are biased with the voltage source, depending on whether hydrogen ions or hydroxyl ions are required on the sensing site. The voltages on both WE or CE are kept constant until the target amount of charge is achieved. This configuration makes sure that the feedback charge can be delivered, while the potential induced by titration voltage has negligible influence on the sensor biasing and sampling.
The measurement and feedback circuitry is illustrated in
The charge measurement is composed of the current sensing circuitry and integrator. The current flowing through the WE and CE induces the voltage change in the sensing resistor, which is amplified by the instrumentation amplifier. The integrator calculates the total charge delivery during each period.
The feedback control and charge calculation is realized in a external Labview system. The measured results are fed through a 3rd order IIR LPF to attenuate the thermal and PWM noise in broad band. The filtered results are converted to charge change, providing the feedback. The feedback charge is compared to the measured titration charge during the titration stage, an off signal is generated when the comparator changes the sign.
To prove the noise shaping function of the proposed system and simplify the measurement, we designed two types of experiments, the zero-input, and constant input. All the experiments are performed in an enclosed Faraday cage shielding environmental noise, and the temperature of electrolyte is kept at 27° C. To make a consistent measurement and attenuation effect, we kept the sampling frequency at 0.2 Hz while the PWM frequency was at 100 Hz. The offset of the instrumentation system was measured and removed from the following experiments to minimize measurement mismatch
a. Zero Input
In zero input experiments, the ion concentration, i.e. the pH of the electrolyte, was kept constant. A 1 mM/L KCl with 100M/L phosphate buffer is used as the electrolyte, giving a constant pH of 6.7. The measured results of the CMOS ISFETs are shown in
The frequency spectrum of measured results was obtained by performing FFT on time domain data, as shown in
To generate a constant input signal for the SDM, we used the following simple reaction to mimic a step input:
H2O+CO2H++HCO3− (7)
The reaction rate can be controlled by the phosphate buffer or magnesium ion concentration in an alkaline environment. We first perform several reference tests using conventional pH probe. The pH change rate is found to be varying from 2 pH/hr to 0.2 pH/hr with different amount of phosphate buffer and KCl. Therefore, in order to generate different input signal, different concentrations of phosphate buffer were used from 0.1M/L to 100M/L and magnesium ion concentration varying from 1 u M/L to 100 uM/L.
During the tests, the designated chemical compound were added to the electrolyte, which after stirring settled down to an initial pH measured by the METTLER TOLEDO pH probe. After that, the continuous control of electrodes and measurement sensors were taken. After pH readings from the reference sensor dropped below pH8, the measurement was stopped and an end-point pH was measurement using the same pH probe. After each experiment, the pH measured from the pH probe was compared to the reference test without any sensors to validate a constant pH change. An example of measurement results without settled down/stirring period is shown in
It clearly shows that when there was a pH change, the proposed sensing scheme tracks the pH change, and generates a constant voltage output corresponding to the constant ion-change rate. It should be noted that there was a slight drop in the final stage measurement, which further proves that the ion change per sample is what has been measured rather than the pH change, since the constant pH change is equivalent to a exponential change in charge concentration. Compared to the reference sensor, the measurement results of SDM sensors exhibit a drift of low magnitude, when in open loop measurement, the drift follows an exponential characteristic, ranging about several millivolts.
Different experiments with various ion change rate have been performed. The charge change rates are integrated to provide total charge change, which are compared to the calculated results from the concentration change measured by the pH probe. These pH change values are also verified by the preliminary measurement without sensors. The results are shown in
Filing Document | Filing Date | Country | Kind | 371c Date |
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PCT/GB2012/050494 | 3/6/2012 | WO | 00 | 8/29/2014 |