Patent Application
20180135089
The present invention relates to a method for chondroitin sulfate biosynthesis. The disclosure herein relates to the field of pharmaceuticals field.
Chondroitin sulfate (CS) belongs to glycosaminoglycan (GAG), is an anion, linear, and acidic polysaccharides with repeating disaccharides unit of alternative 1-4-glucuronic acid (GlcUA) and 1-3-N-acetylgalactosamine (GalNAc) with some sulfated modification. CS was structural heterogeneity and each disaccharides was sulfated differently: CSA=GlcUA-GalNAc(4S); CSC=6S, GlcUA-GalNAc(6S)); CSE=GlcUA-GalNAc(4S6S); CSK=GlcUA(BS)-GalNAc(4S), CSL=GlcUA(3S)-GalNAc(6S), and CSM=GlcUA(3S)-GalNAc(4,6S). Because of the physiological anti-inflammatory function, CSA and CSC have recently substituted the conventional nonsteroidal drugs for osteoarthritis treatment while CSE promote neurite outgrowth toward primary neurons and play an important role in anticoagulant activity of thrombomodulin as heparin.
All the CS applied in pharmacological was extracted from shark cartilages, bovine, and so on. However, another glycosaminoglycan, keratin sulfate, was the contaminant of the CS, and was hard to separate it from CS because of the similar structure during the extraction procedures. It limited the application of CS in other pharmacological industry other than as osteoarthritis drugs. What's worst, there may be a risk of acquiring mad cow disease after ingested chondroitin sulfate from bovine tissue (FDA). Therefore, several reports appeared in the documents for the synthesis of CS in the last few years with CS oligosaccharides synthesis. Sulfated modification was challenging to introduce sulfate groups to the specific position of oligosaccharides chains by chemical synthesis. So bioenzymatic method for CS was supposed to be an optimum method, which was mild, effective and specify as for HP and other glycosaminoglycan.
The synthesis of GAG by bioenzymatic method was divided into two parts: precursor synthesis, sulfated modification. The precursor was synthetized by kinds of glycosyltransferases and epimerases. However, the active sulfotransferase was supposed to be glycosylated modification during the process of protein maturation. But there was no glycosylated modification in prokaryote and different glycosylated modification in eukaryote. So these sulfotransferases were only expressed in some animal cells, such as COS cell, for a long time. So it was difficult in expressing the sulfotransferases in microbial cells. During the last decade, some reports in the document pointed that the sulfotransferase for HP synthesis was expressed with the active protein in yeast while these active sulfotransferases also need glycosylated modification. Therefore, the yeast was choosen to be host for C6ST, C4ST, and CHST15 expressing. It was supposed to be a method for CS synthesis by bioenzymes and also may be will correct the application of CS in other pharmaceutical fields.
A technical problem to be solved by the present invention is to provide a method for biosynthesis of CS.
The purpose of this invention is to provide a method for bioactive Chondroitin sulfate (CS) synthesis. CS is generated by sulfating chondroitin using C4ST (Chondroitin 4-sulfotransferase) or C6ST (Chondroitin 6-sulfotransferase) assisted with PAPS (3′-phosphoadenosine-5′-phosphosulfate) regeneration system.
In one embodiment of the present disclosure, C4ST and C6ST are produced by microorganisms heterogeneously expressing the gene encoding C4ST or C6ST from animals.
In one embodiment of the present disclosure, the host used to express C4ST or C6ST can be Escherichia coli or Pichia pastoris, accordingly, the plasmids used for recombinant expression can be pET or pPIC.
In one embodiment of the present disclosure, the sequence of gene encoding C4ST is recorded as Gene ID: 58250 in NCBI (National Center for Biotechnology Information Search database).
In one embodiment of the present disclosure, the sequence of gene encoding C6ST is recorded as Gene ID: 53374 in NCBI.
In one embodiment of the present disclosure, the PAPS regeneration system contains 0.1-100 μg ASST IV (Aryl sulfotransferase IV), 0.1-50 mM PNPS (p-nitrobenzenesulphonic acid), 1-200 μM PAP (3′5′-adenosine diphosphate) and 1-200 mM Tris-HCI (pH5-9). The PAPS regeneration system was used to catelyze PNPS to PAPS.
In one embodiment of the present disclosure, ASST IV (Gene ID: 83783) was expressed in E. coli. based on the plasmids of pET.
In one embodiment of the present disclosure, 0.1-100 μg C4ST or C6ST is added to PAPS regeneration system for CS synthesis.
In one embodiment of the present disclosure, specific activity of ASST IV is 0.1-100 nmol/min·mg·protein, specific activity of C4ST activity is 0.1-100 pmol/min·mg·protein, specific activity of C6ST activity is 0.1-100 pmol/min·mg·protein.
In one embodiment of the present disclosure, CS is generated by sulfating chondroitin using C4ST or C6ST assisted with PAPS regeneration system under 10-50° C.
In one embodiment of the present disclosure, CS is generated by sulfating chondroitin using C4ST or C6ST assisted with PAPS regeneration system under 25-50° C.
In one embodiment of the present disclosure, CS is generated by sulfating chondroitin using C4ST or C6ST assisted with PAPS regeneration system within 1-50 h.
In one embodiment of the present disclosure, CS is generated by sulfating chondroitin using C4ST or C6ST assisted with PAPS regeneration system within 20-50 h.
In one embodiment of the present disclosure, chondroitin is produced by recombinant Bacillus subtilis 168. The recombinant B. subtilis 168 is constructed by expressing KfoC and Kfotk in genome and co-expressing genes related to the synthetic pathway of chondroitin, such as genes related to the synthetic pathway of UDP-glucuronic acid (UDP-GlcUA) or UDP-N-Acetylglucosamine (UDP-GlcNAc). Genes related to the synthetic pathway of UDP-GlcUA include pgcA, gtaB, tuaD. Genes related to the synthetic pathway of UDP-GlcNAc include glmS, glmM, glmU.
In one embodiment of the present disclosure, the recombinant B. subtilis 168 is constructed by expressing KfoC and Kfotk in genome and co-expressing genes tuaD and glmU, or co-expressing genes tuaD, glmU, gtaB, glmM and glmS.
In one embodiment of the present disclosure, plasmid pP43NMK is used to express genes related to the synthetic pathway of chondroitin.
In one embodiment of the present disclosure, the recombinant B. subtilis 168 is cultivated at 37° C. for 24-60 h to produce chondroitin. Chondroitin can be collected from the supernant of cultivation. The fermentation medium comprises 20 g/L yeast extract, 15 g/L or 50 g/L surcose, 3.9 g/L K2SO4, 1.5 g/L MgSO4 and 50 mM phosphate buffer, pH 6.5-7.5.
The present disclosure provides a method for expressing C4ST and C6ST in microorganisms and using C4ST and C6ST to synthesize Chondroitin sulfate (CS) for the first time. 10-30% of chondroitin was converted to CS which shows a great potential in industry application.
Analysis of C4ST and C6ST activity: The activity of C4ST and C6ST was analysis based on chondroitin. The reaction liquor were 20 mM Tris-HCI (pH7.0), 3 mM PNPS, 20 M PAP, 10 mg ASST IV, 5 mg/mL chondroitin, and 20
g C4ST or C6ST. The reaction was happened at 37° C. for 20 h, and terminated by heating at 100° C. for 5 min. At last, the absorbance was determinated at 400 nm. The blank was reaction liquor components with no C4ST and
C6ST. Product rate was calculation by the formula Y=10-3*(18.83*(AC-AASST IV)+0.38; Ac: the absorbance of C4ST or C6ST; AASST IV: the absorbance of blank.
Chondroitin molecular weight analysis: The moleculat weight of chondroitin was analysed by combination of Multi-Angle Laser Light Scattering Instrument and Size Exclusion Chromatography with Ultrahydrogel Linea on refractive index detector. It was performed with 0.5 mL/min phase (0.1 M NaNO3) at 50° C. for 20 min and injection volumn was 20 L.
The genes encoding Rat ASST IV C4ST, and C6ST were separately inserted between the Nde I and Not I sites of pET26b after the T7 promoter and fusing with His-tag in the N-terminal to obtain the engineering plasmids pET26b-C4ST, pET26b-C6ST, and pET26b-ASST IV (The primers used were listed in Tab. 2). Finally, those plasmids were transformed into E. coli BL21 (DE3) and plated on LB plate with 50 μg/mL ampicillin for screening.
The E. coli BL21 separately containing pET26b-C4ST, pET26b-C6ST, and pET26b-ASST IV was cultivated in Luria-Bertani (LB) medium with 50 μg/mL ampicillin at 37° C. in a rotary shake at 220 rpm. Two milliliter of culture was inoculated into 50 mL of LB medium with 50 μg/mL ampicillin and cultivated at 37° C. Then, after 2 h, OD600 of the broth reached 0.6-0.8, 30 μL of 0.1 mM IPTG (isopropyl-β-D-thiogalactopyranoside) was add into the broth. After it was induced at 16° C. for 48 h, cells were harvested by centrifugation at 8000 rpm for 5 min at 4° C.
The recombinant E. coli BL21 were washed by 20 mM Tris-HCI (pH7.0), and diluted in 20 mM Tris-HCI (pH7.0) to have an absorbance of 10 at 600 nm. The suspended cells were lysed by sonication at 4° C. The cleared lysate was mixed were separated by 8-12% SDS-PAGE and identified by size comparison to Pre-stained standard (ThermoFisher, Germany) (
Genes encoding Rat C4ST, C6ST were amplified by PCR using the PrimeSTAR HS (Premix) with the primes containing the sequence of pPIC3.5K as overlapping overhangs in the 5′-terminal, followed by Gibson isothermal assembly cloning to circularize to obtain the engineering pPIC3.5K-C4ST, and pPIC3.5K-C6ST with alpha signal peptide (The primers used were listed in Table 2). Then, the transformation and recombinant screening were proposed according to the instructions of A Pichia Vector for Multicopy Integration and Secreted Expression (Invitrogen, Germany).
pPIC3.5K-C4ST and pPIC3.5K-C6ST were separately transformed into P. pastoris GS115 to get recombinant P. pastoris GS115. Recombinant P. pastoris GS115 was cultivated in 50 mL BMMY medium containing 0.5 g/L methanol at 20° C. 200 rpm for 5 d. The culture supernatants were collected for C4ST and C6ST purification. The supernatants were filtered through a 0.22 μm membrane and concentrated with Millipore ultrafiltration system according to the manufacturer's instructions with a membrane of 3 kDa cut off, the resulted samples were analysis and identified by SDS and MALDI-FOR-MASS (
C4ST and C6ST activity was also assayed by changes of absorbance at 400 nm due to the formation of free 4-nitrophenol as described with some modification (
The conversion of chondroitin to CSA or CSC involved two steps, including PAPS regeneration and sulfotransferase modification. In briefly, the standard reaction mixture containing 3 mM 3′-phosphoadenosine 5′-phosphate (PNPS), 10 mg ASST IV (0.1-100 nmol/min*mg*protein) and 5 mg/mL chondroitin, and 20 μg C4ST (0.1-100 pmol/min*mg*protein) or C6ST (0.1-100 pmol/min*mg*protein), and 20 mM Tris-HCI (pH7.0) buffer. The mixture was incubated at 37° C. for 20 h for CSA or CSC.
CS disaccharide fraction was analysed by LCMS after it was lysed by chondroitinase ABC at 37° C. for 5-20 h and terminated at 100° C. for 5 min. The LC were performed at C18 Reverse phase column, 0.3 mm*250 mm, with phase A (8 mM CH3COOH), phase B (8 mM CH3COOH 70% methanol/H2O). The elution condition was in Table 1. The MS were performed with nitrogen as the desolation gas and as a nebulizer in negative-ion modes. The nebulizer flow was 0.75 L/min and nozzle temperature was 140° C. The N2 was also the drying gas with the flow 1.2 mL/min. The negative ion spectra were generated by scanning the range of 40-2000 m/z, with special ion peaks M/Z 397 and 458 (
At first, B. subtilis E168C components were prepared. The inorganic ions components was (g/L): K2HPO4, 140; KH2PO4, 60; (NH4)2SO4, 20; (Na3C6H5O7·2H2 O); MgSO4·7H2O, 2. GMI solutions used for components preparation containing 9.7 mL inorganic ions, 2.5 mL 20% glucose, 0.4 mL 5% casein, 1 mL 10% yeast extract per 100 mL. GMII solutions used for components preparation containing 9.7 mL inorganic ions, 2.5 mL 20% glucose, 0.08 mL 5% casein, 0.04 mL 10% yeast extract, 0.25 mL 1M MgCl2, 0.05 mL 1M CaCl2 per 100 mL. In detail, the colony of B. subtilis E168C was inoculated in 5 mL GMI, and cultivated at 30° C., 125 rpm for 16 h. Then, it was inoculated into 18 mL GMI with 10% (V/V), and cultivated at 37° C., 200 rpm for 3.5 h. Following, it was inoculated into 90 mL GMII with 10% (V/V), and cultivated at 37° C., 200 rpm for 1.5 h. Then, the cells were collected by centrifugation at 4° C., 5000 g for 10 min, and resuspended in 10 mL GMII, packaged it in 500 L for each one.
The recombinant plasmids pP43-DBA, pP43-UMS, pP43-DU, and pP43-DU-PBMS used for coexpression pathway genes were construction based on the parent expression plasmid pP43NMK (Production of specific-molecular-weight hyaluronan by metabolically engineered Bacillus subtilis 168, Metabolic Engineering, 2016, Jinpeng). Then, they were transformed into B. subtilis E168C components by chemical transformation, and cultured in LB plates with 50 μg/mL kanamycin for transformant selection. All the transformant were confirmed by colony PCR with the primers gtaB-F/pgcA-R, glmM-F/glmS-R, tuaD-F/glmU-R, and glmU-F/gtaB-R. The results of electrophoresis were in
All the four recombinant strains were inoculated into LB with 50 μg/mL kanamycin, cultured at 37° C., 200 rpm for 16 h. Then, they were inoculated with 10% (V/V) into fermentation medium (20 g/L yeast extract, 50 g/L sucrose, 3.9 g/L K2SO4, 1.5 g/L MgSO4, 50mM phosphate buffer, pH7.0 50 μg/mL kanamycin ), cultured in 37° C., 200 rpm for 54 h. And then, it was induced at the second hours by 20 g/L xylose. All the medium for B. subtilis E168C culture have no kanamycin. After fermentation, the culture was centrifugated at 10000 g for 5 min, and the supernants were collected. Then 3V ethanol were added and mixed at 4° C. for 1 h for the precipitation, after centrifugated at 10000 g for 5 min, the sediment was collected and resuspended in H2O. Then, the centrifugation and resuspend steps were repeats for three times for chondroitin purification. The chondroitin concentration was assayed by Bitter-Muir carbazole assay. 200 L samples and 1 mL Na2B4O7.10H2O-H2SO4 were mixed in tubes and boiled for 15 min. After they were cooled down, 50
L carbazole was added and mixed, then boiled for 15 min. The optical density was determinated after they were cooled down, and the chondroitin yield was calculated.
The chondroitin yield was increased by recombinant strains (B. subtilis E168C/pP43-DBA 2.17 g/L, B. subtilis E168C/pP43-UMS 2.37 g/L, B. subtilis E168C/pP43-DU 1.96 g/L, B. subtilis E168C/pP43-DU-PBMS 2.67 g/L), compared to parent (1.83 g/L) (
aMn (kDa)
bMw (kDa)
cIp
B. subtilis E168C
B. subtilis E168C/
B. subtilis E168C/
B. subtilis E168C/
B. subtilis E168C/
anumber-average molecular weight(Mn);
brelative molecular mass(Mw);
cpolydispersity(Ip = Mw/Mn).
B. subtilis E168C/pP43-DU-PBMS was inoculated into 150 mL LB broth, with 50 μg/mL kanamycin and cultivated at 37° C., 200 rpm for 16 h. Then, they were inoculated with 10% (V/V) into fermentation medium (20 g/L yeast extract, 50 g/L sucrose, 3.9 g/L K2SO4,1.5 g/L MgSO4, 50 mM phosphate buffer, pH7.0 50 μg/mL kanamycin ), and cultivated at 37° C., 2 vvm. 2h after the inoculation into fermentation medium, 20 g/L xylose was added. The pH was adjusted to 7.0 by 5 M NaOH. The stirred rate was adjusted to 600 rpm at the 6th hours, and 800 rpm at the 8th hours. 800 g/L sucrose solution was feed when the sucrose concentration of broth bellowed than 5 g/L to keep the sucrose concentration at 0-5 g/L. In detail, the feed strategy was 7.5, 7.5,15,10 g/L/h during 8-12 h. After the fermentation, the Mw, Mn, and Ip were assayed by HPSEC-MALLS.
It showed that Time course of chondroitin production was in S style. Chondroitin mainly accumulated during later stationary phase (
| Number | Date | Country | Kind |
|---|---|---|---|
| 201610997085.4 | Nov 2016 | CN | national |
| 201611149169.9 | Dec 2016 | CN | national |
