Patent Application
20200024305
The present invention relates to a method for producing a peptide. More specifically, the present invention relates to a method for synthesizing a large amount of a long-chain peptide by solid phase synthesis.
Typical stirring means used in the solid phase synthesis of long-chain peptides include stirring by shaking, stirring by nitrogen bubbling, and stirring by a stirrer.
Centrifugal stirrers are also known (for example, Patent Literature 1 to 4), and in an example, a centrifugal stirrer is used as a member of a liposome production apparatus (Patent Literature 5). However, there has been no report of using a centrifugal stirrer as a member of a solid phase peptide synthesizer in the organic synthesis field.
Patent Literature 1: WO 2010/150656 pamphlet
Patent Literature 2: JP 2014-124540 A
Patent Literature 3: JP 2015-171695 A
Patent Literature 4: JP 2015-47540 A
Patent Literature 5: JP 2016-117005 A
An object of the present invention is to provide at least one solid phase synthesis method selected from a novel solid phase peptide synthesis method of synthesizing a large amount of a peptide, a novel solid phase peptide synthesis method of synthesizing a high-purity long-chain peptide, and a novel solid phase peptide synthesis method causing fewer side reactions.
As a result of intensive studies in order to attain the above objects, the inventors of the present invention have found that application of a centrifugal stirrer to solid phase peptide synthesis enables synthesis of a large amount of a high-purity long-chain peptide. The inventors have further studied on the basis of the findings and have completed the present invention.
In other words, the present invention relates to the following aspects.
[1] A method for producing a peptide, the method comprising solid-phase synthesis of a peptide under stirring with a centrifugal stirrer having no impeller.
[2] The production method according to the above [1], wherein the centrifugal stirrer having no impeller is a stirring rotor comprising
a main body configured to rotate about a rotating shaft,
an inlet port provided on a surface of the main body,
an outlet port provided on the surface of the main body, and
a flow path connecting the inlet port to the outlet port,
the inlet port is provided closer to the rotating shaft than the outlet port, and
the outlet port is provided more distant from the rotating shaft in a centrifugal direction than the inlet port.
[3] Use of a centrifugal stirrer having no impeller for solid phase peptide synthesis.
[4] A reaction container for solid phase peptide synthesis, the reaction container comprising a centrifugal stirrer having no impeller.
[5] The reaction container for solid phase peptide synthesis according to the above [4], further comprising a glass filter.
According to the present invention, at least one solid phase synthesis method selected from a novel solid phase peptide synthesis method of synthesizing a large amount of a peptide, a novel solid phase peptide synthesis method of synthesizing a high-purity long-chain peptide, and a novel solid phase peptide synthesis method causing fewer side reactions (for example, unfavorable side chain deprotection reaction in resin cleavage reaction of a fragment peptide before the final coupling reaction) can be provided.
The reaction in the solid phase synthesis includes protecting group introduction reaction before coupling reaction, activation reaction of a carboxyl group or an amino group contributing to coupling reaction of a peptide before coupling reaction, coupling reaction, resin cleavage reaction, and deprotection reaction after coupling reaction and resin cleavage reaction.
The present invention provides a method for producing a peptide, and the method comprises solid-phase synthesis of a peptide under stirring with a centrifugal stirrer having no impeller.
A centrifugal stirrer having no impeller means, for example, a stirrer itself having no impeller in appearance but having a function of stirring a fluid using centrifugal force. The fluid preferably contains a resin, intended peptide constituent amino acids, or a combination of them. The centrifugal stirrer having no impeller may have, for example, a rotor structure in which an inlet port near a rotating shaft is connected to an outlet port distant from the rotating shaft through a flow path. The stirring principle may be, for example, as follows: rotation of a stirrer generates centrifugal force in a flow path; a fluid is discharged in the lateral direction; a longitudinal flow path has a negative pressure; and a negative pressure suction flow is generated in a lower part.
A configuration example of a container equipped with a centrifugal stirrer having no impeller is shown in
As the centrifugal stirrer having no impeller, M-Revo (registered trademark) or E-REVO manufactured by MEDECH Co., Ltd., or the like can be used.
As the centrifugal stirrer having no impeller, for example, the stirrers according to WO 2010/150656 pamphlet, JP 4418019 B, and JP 2014-124540 A may be used.
In other words, the centrifugal stirrer having no impeller may be
(1) a stirring rotor comprising
a main body configured to rotate about a rotating shaft,
inlet ports provided on the surface of the main body,
outlet ports provided on the surface of the main body, and
flow paths connecting the inlet ports to the outlet ports, in which
the inlet ports are provided closer to the rotating shaft than the outlet ports, and
the outlet ports are provided more distant from the rotating shaft in the centrifugal direction than the inlet ports (for example, see
(2) a stirring rotor comprising
a main body having a circular cross-section perpendicular to a rotating shaft direction,
inlet ports provided on the surface of the main body,
outlet ports provided on the surface of the main body, and
flow paths connecting the inlet ports to the outlet ports, in which
the inlet ports are provided closer to the rotating shaft than the outlet ports, and
the outlet ports are provided more distant from the rotating shaft in the radial direction than the inlet ports (for example, see
(3) a stirrer main body comprising a cylindrical rotary member comprising a cylindrical casing having an upper end closed with a top plate, in which the stirrer main body is configured to be rotated by a rotating drive shaft fixed to the top plate, about a central axis of the cylindrical casing,
the cylindrical rotary member comprises
a plurality of discharge openings penetrating the peripheral face of the cylindrical casing,
a plurality of projecting extruded plates provided on the inner peripheral face of the cylindrical casing so as to project inward, and
a suction opening provided on the lower end of the cylindrical casing, and
when rotated, the cylindrical rotary member generates, by means of the projecting extruded plates, an inner circulation flow that circulates an internal stirring liquid about the central axis, then discharges a part of the stirring liquid contained in the inner circulation flow by centrifugal force from the discharge openings as an outer discharge flow to the outside, and incorporates an external stirring liquid from the suction opening as a suction flow into the inside (for example, see
As the stirring apparatus, a container equipped with the above stirrer can be used, for example. “Being equipped” means integration as a part of an apparatus, for example.
The stirring apparatus may be
a stirring apparatus comprising a stirring rotor and a flow resistor that are adjacent to each other, in which
the stirring rotor comprises
a main body configured to rotate about a rotating shaft,
inlet ports provided on the surface of the main body,
outlet ports provided on the surface of the main body, more distant from the rotating shaft in the centrifugal direction than the inlet ports, and
flow paths connecting the inlet ports to the outlet ports,
the flow resistor comprises
a resistor main body configured to rotate about a resistor rotating shaft,
resistor inlet ports provided on the surface of the resistor main body,
resistor outlet ports provided on the surface of the resistor main body, more distant from the resistor rotating shaft in the centrifugal direction than the resistor inlet ports, and
resistor flow paths connecting the resistor inlet ports to the resistor outlet ports, and
the resistor main body is different in shape or size from the main body of the stirring rotor or has a posture different from that of the main body of the stirring rotor (for example, see
The above stirring apparatus is useful as a reaction container for solid phase peptide synthesis.
The reaction container for solid phase peptide synthesis is preferably equipped with a column-shaped container and a centrifugal stirrer having no impeller (for example, see
The reaction container for solid phase peptide synthesis is preferably equipped with a heating medium jacket (cover), a heating medium inlet port, and a heating medium outlet port on the outer side of the column-shaped container (for example, see
The reaction container for solid phase peptide synthesis is preferably, further equipped with a glass filter. The glass filter may be a crucible type, a Buchner funnel type, or a plate type, and, for example, a commercial product is available. The plate size of the glass filter is not limited to particular sizes and can be appropriately changed. The pore size of the glass filter can be smaller than the size of a resin (solid phase support) used for solid phase synthesis so as to filter a liquid while the resin is held on the filter. The glass filter is preferably located higher than the bottom face of the reaction container for solid phase peptide synthesis and/or lower than the centrifugal stirrer having no impeller (for example, see
The reaction container for solid phase peptide synthesis is preferably equipped with a cock, and, for example, a commercial product is available. The cock is preferably located lower than the bottom face of the reaction container for solid phase peptide synthesis and the glass filter (for example, see
The reaction container for solid phase peptide synthesis is more preferably equipped with the glass filter and the cock.
The dimensions and the centrifugal force of the rotor of the centrifugal stirrer are not limited to particular values and can be appropriately changed.
The centrifugal stirrer preferably has a plurality of (for example, 2 to 10) outlet ports on the circumference. The discharge factor (total opening area of outlet ports×circumferential length) as an index of the stirring performance of a rotor is preferably 60 cm3 to 6,000 cm3 and more preferably 200 cm3 to 2,000 cm3.
The peptide may be, for example, a peptide having an amino acid residue number of 5 to 150, a peptide having an amino acid residue number of 5 to 34, a peptide having an amino acid residue number of 15 to 100, a peptide having an amino acid residue number of 10 to 80, a peptide having an amino acid residue number of 15 to 80, a peptide having an amino acid residue number of 10 to 60, or a peptide having an amino acid residue number of 15 to 60.
The peptide may be, for example, abarelix, insulin and analogs thereof, endothelin, β-endorphin, oxytocin, calcitonin, carperitide, glucagon, glucagon-like peptide-1 (GLP-1), glucagon-like peptide-2 (GLP-2), ghrelin, goserelin, cholecystokinin, sinapultide, atrial natriuretic peptide (ANP), secretin, cetrorelix, somatostatin, degarelix, desmopressin, teduglutide, teriparatide, brain natriuretic peptide (BNP), vasopressin, parathormone, bradykinin, peginesatide, lanreotide, β-lipotropin, γ-lipotropin, leuprorelin, linaclotide, liraglutide, or a salt thereof. The salt is not specifically limited as long as it is a pharmaceutically acceptable salt. Examples of the salt include pharmaceutically acceptable acid addition salts, metal salts, ammonium salts, and organic amine addition salts. Examples of the acid addition salt include inorganic acid salts such as hydrochloride, nitrate, sulfate, and phosphate; and organic acid salts such as oxalate, acetate, trifluoroacetate, maleate, fumarate, tartrate, citrate, lactate, malate, succinate, gluconate, ascorbate, and p-toluenesulfonate. Examples of the metal salt include alkali metal salts such as a sodium salt and a potassium salt; alkaline earth metal salts such as a magnesium salt and a calcium salt; and an aluminum salt and a zinc salt. Examples of the ammonium salt include an ammonium salt and a tetramethylammonium salt. Examples of the organic amine addition salt include a piperidine addition salt. Specifically, an acid addition salt, an organic acid salt, and the like are preferred, and acetate is more preferred.
The process conditions for the solid phase synthesis have been well established, and therefore any known method (for example, Merrifield solid phase synthesis) can be used without particular limitation as long as a centrifugal stirrer having no impeller is used as the stirrer. The reaction in the solid phase synthesis includes protecting group introduction reaction before coupling reaction, activation reaction of a carboxyl group or an amino group contributing to coupling reaction of a peptide before coupling reaction, coupling reaction, resin cleavage reaction, and deprotection reaction after coupling reaction and resin cleavage reaction. For the deprotection of Fmoc group (9-fluorenylmethyloxycarbonyl group), DMF/20% piperidine may be used. For the deprotection of Boc group (tert-butoxycarbonyl group), trifluoroacetic acid may be used. Ninhydrin reaction by Kaiser Test or another method may be used to detect the presence of unreacted amino groups.
See Examples below for examples of the solid phase synthesis.
According to the peptide production method of the present invention, for example, a large amount of a peptide can be synthesized. The amount of a peptide to be synthesized is preferably larger than the amount of a peptide synthesized by a peptide production method without the centrifugal stirrer having no impeller. For example, the amount may be 1 g or more, 10 g or more, 100 g or more, 200 g or more, or 300 g or more.
The peptide synthesized by the peptide production method of the present invention preferably has a higher purity than that of a peptide synthesized by a peptide production method without the centrifugal stirrer having no impeller. The HPLC purity is preferably, for example, 60% or more, 70% or more, 80% or more, or 90% or more.
The peptide synthesized by the peptide production method of the present invention preferably contains a smaller amount of reaction by-products including de-tritylated products than a peptide synthesized by a peptide production method without the centrifugal stirrer having no impeller. The content of de-tritylated products is preferably, for example, 5% or less, 3% or less, or 1% or less.
The present invention encompasses embodiments of various combinations of the above constitutions within the technical scope of the present invention as long as the advantageous effects of the invention are exerted.
The present invention will next be described more specifically with reference to examples, but the present invention is not intended to be limited to these examples, and many modifications can be made by a person skilled in the art within the technical idea of the present invention.
In the examples, the following HPLC conditions were used for measurement.
Mobile phase A: 0.1% aqueous TFA
Mobile phase B: 0.08% TFA in acetonitrile
Flow rate: 1 mL/min
In the disclosure, pseudo-pro represents pseudoproline, Trt represents trityl group, HOBt represents 1-hydroxy-1H-benzotriazole monohydrate, DMF represents N,N-dimethylformamide, DIC represents diisopropylcarbodiimide, DIEA represents diisopropylethylamine, Oxyma represents ethyl (hydroxyimino)cyanoacetate, TFA represents trifluoroacetic acid, TIS represents tri(isopropyl)silane, EDT represents ethanedithiol, Cleavage mixture represents acetic acid/trifluoroethanol/dichloromethane (volume ratio: 10/10/80), IPE represents isopropyl ether, and TFE represents 2,2,2-trifluoroethanol.
(1) In a reaction container, H-Gly-O-Trt(2-Cl)-resin (80.00 g), Fmoc (9-fluorenylmethoxycarbonyl)-amino acid (2.5 eq.), HOBt as an activator (22.42 g, 2.5 eq.), DMF as a reaction solvent (800 mL), and DIC (25.70 mL) were placed.
(2) The mixture was centrifugal-stirred using an M-Revo (registered trademark) for 2 hours or more.
(3) The reaction solvent was removed, and the Fmoc-amino acid-introduced resin was washed with DMF (800 mL), dichloromethane (800 mL), and DMF (800 mL) using the M-Revo (registered trademark).
(4) A small amount of the Fmoc-amino acid-introduced resin was sampled and was subjected to Kaiser Test, and no coloration of the resin was ascertained. If resin beads were colored by Kaiser Test, the operations (1) to (3) were repeated until the resin beads were not colored.
(5) To the resulting Fmoc-amino acid-introduced resin, 20% piperidine/DMF (800 mL) was added.
(6) The mixture was centrifugal-stirred using the M-Revo (registered trademark) for 20 minutes or more.
(7) The reaction solvent was removed, and the residue was washed with DMF (800 mL), dichloromethane (800 mL), and DMF (800 mL) using the M-Revo (registered trademark).
(8) Kaiser Test was performed to ascertain coloration of the resin beads.
(9) The operations (1) to (8) were performed until the following side chain-protected AFR-resin (230 g) was obtained. The serine (pseudoproline) residue was introduced as Fmoc-valine-serine (pseudoproline) that was a dipeptide with an N-terminus protected by an Fmoc group.
(1) In a reaction container, Cl-Trt(2-Cl)-resin (40.00 g) and Fmoc-Phe-OH (56.17 g) were placed under an argon gas atmosphere.
(2) Dichloroethane (400 mL) and DIEA (25.25 mL) were added.
(3) The mixture was centrifugal-stirred using an M-Revo (registered trademark) for 3 hours or more.
(4) The reaction solvent was removed, and DIEA (5.05 mL), methanol (40 mL), and dichloroethane in such a volume as to enable stirring were added.
(5) The mixture was centrifugal-stirred for 1 hour using the M-Revo (registered trademark) under an argon gas atmosphere.
(6) The reaction solvent was removed, and the residue was washed with DMF (400 mL), dichloromethane (400 mL), and DMF (400 mL) using the M-Revo (registered trademark).
(7) A small amount of the Fmoc-Phe-O-Trt(2-Cl)-resin was sampled and subjected to Kaiser Test, and no coloration of the resin beads was detected.
(8) To the resulting Fmoc-Phe-O-Trt(2-Cl)-resin, 20% piperidine/DMF (400 mL) was added.
(9) The mixture was centrifugal-stirred using the M-Revo (registered trademark) for 20 minutes or more.
(10) The reaction solvent was removed, and the residue was washed with DMF (400 mL), dichloromethane (400 mL), and DMF (400 mL) using the M-Revo (registered trademark).
(11) Kaiser Test was performed to ascertain coloration of the resin beads.
(12) An H-Phe-O-Trt(2-Cl)-resin was obtained.
(13) In a reaction container, the H-Phe-O-Trt(2-Cl)-resin obtained in (12), Fmoc-amino acid (2.5 eq.), HOBt (19.59 g, 2.5 eq.), DMF (10 to 20 v/w), and DIC (22.45 mL, 2.5 eq.) were placed.
(14) The mixture was centrifugal-stirred using an M-Revo (registered trademark) for 2 hours or more.
(15) The reaction solvent was removed, and the Fmoc-amino acid-introduced resin was washed with DMF, dichloromethane, and DMF using the M-Revo (registered trademark).
(16) A small amount of the Fmoc-amino acid-introduced resin was sampled and subjected to Kaiser Test, and no coloration of the resin beads was detected. If resin beads were colored by Kaiser Test, the operations (13) to (15) were repeated until the resin beads were not colored by Kaiser Test.
(17) To the resulting Fmoc-amino acid-introduced resin, 20% piperidine/DMF (400 mL) was added.
(18) The mixture was centrifugal-stirred using the M-Revo (registered trademark) for 20 minutes or more.
(19) The reaction solvent was removed, and the residue was washed with DMF (400 mL), dichloromethane (400 mL), and DMF (400 mL) using the M-Revo (registered trademark).
(20) Kaiser Test was performed to ascertain coloration of the resin beads.
(21) The operations (13) to (20) were performed until the following side chain-protected BFR-resin (310 g) was obtained.
(1) Into a container containing the side chain-protected BFR-resin (80 g), a degassed Cleavage mixture (800 mL) was added.
(2) The mixture was centrifugal-stirred using an M-Revo (registered trademark) for 2 hours.
(3) The reaction solution was filtered and was washed with Cleavage mixture (80 mL) three times and then with dichloromethane (160 mL).
(4) The filtrate was concentrated under reduced pressure at an outside temperature of 25° C.
(5) To the residue after concentration, dichloromethane (160 mL) was added to dissolve crystals.
(6) In a reaction container, IPE (4000 mL) was placed, and the solution resulting from (5) was added dropwise.
(7) The mixture was stirred at room temperature for 1 hour, and then crystals were filtered under reduced pressure and washed with IPE (800 mL).
(8) The product was dried under vacuum at room temperature, giving side chain-protected B-fragment (67.95 g).
The same solid phase synthesis as in Experimental Example 3 was performed except that a stirrer was used in place of the M-Revo (registered trademark), giving side chain-protected B-fragment.
Acetonitrile solutions of the products of Comparative Examples 1 and 2 and Experimental Example 3 were subjected to HPLC analysis, and the results are shown in Tables 5 to 7 and
The results of Experimental Example 3 and Comparative Examples 1 and 2 are shown in Table 8.
The above results reveal that the B-fragment in Experimental Example 3 had an HPLC purity of 69.2%, which was substantially equivalent to those in Comparative Examples 1 and 2, but the content of the de-tritylated by-product was 4.79%, which was not higher than a half of those in Comparative Examples 1 and 2. In other words, the solid phase synthesis using the M-Revo (registered trademark) enabled the production of the B-fragment having a higher purity or containing a smaller amount of the unfavorable de-tritylated product than the solid phase synthesis using a stirrer.
The side chain-protected AFR-resin prepared in Experimental Example 1 was treated in the same manner as in Experimental Example 3 to cleave the side chain-protected A-fragment from the resin, then the C-terminal carboxyl group thereof was activated, and the side chain-protected B-fragment was reacted to synthesize side chain-protected 34-residue peptide. The side chain protecting groups were deprotected to give an intended peptide.
(1) In a recovery flask, Fmoc-Leu-OH (2.5 eq.), DMF, HOBt (2.5 eq.), and DIC (2.5 eq.) were placed and stirred for 30 minutes. Into a reaction container containing H-Gly-O-Trt(2-Cl)-resin (80.00 g), the reaction solution in the recovery flask was added, and the whole was stirred using an M-Revo (registered trademark) for 2 hours or more. The reaction solvent was removed, and the resin was washed with DMF, dichloromethane, and DMF, giving Fmoc-Leu-Gly-O-Trt(2-Cl)-resin.
(2) To the Fmoc-Leu-Gly-O-Trt(2-Cl)-resin, a 20% piperidine/DMF solution (10 v/w) was added. The mixture was stirred using an M-Revo for 20 minutes, and then the reaction solvent was removed. The residue was washed with DMF (10 v/w, 5 times), dichloromethane (10 v/w, 5 times), and DMF (10 v/w, 5 times), giving H-Leu-Gly-O-Trt(2-Cl)-resin.
(3) To the H-Leu-Gly-O-Trt(2-Cl)-resin, Fmoc-Asn(Trt)-OH (2.5 eq.), HOBt (2.5 eq.), DIC (2.5 eq.), and DMF in such a volume as to enable stirring (about 10 v/w) were added. The mixture was stirred using the M-Revo (registered trademark) for 2 hours or more, and then the reaction solvent was removed. The residue was washed with DMF, dichloromethane, and DMF, giving Fmoc-Asn(Trt)-Leu-Gly-O-Trt(2-Cl)-resin.
(4) To the Fmoc-Asn(Trt)-Leu-Gly-O-Trt(2-Cl)-resin, a 20% piperidine/DMF solution (10 v/w) was added. The mixture was stirred using the M-Revo (registered trademark) for 20 minutes, and then the reaction solvent was removed. The residue was washed with DMF, dichloromethane, and DMF, giving H-Asn(Trt)-Leu-Gly-O-Trt(2-Cl)-resin.
(5) Subsequently, the operations (1) and (2) were repeated for introduction of Fmoc-amino acids and deprotection of Fmoc group. After the introduction of Fmoc-Met-OH, argon bubbling was performed for 10 minutes or more before the start of stirring.
(6) Boc-Ser(tBu)-OH (2.5 eq.) as the 12th residue was coupled in the same manner as in (2), and then the reaction solvent was removed. The residue was washed with MeOH and then dried under reduced pressure, giving side chain-protected AFR-resin (144.12 g).
4. Cleavage of Protected Peptide from Resin and Purity Measurement
(7) To a sample (about 20 to 50 mg) of the side chain-protected AFR-resin prepared in (6), acetic acid/dichloromethane (acetic acid/dichloromethane=1/9 in terms of volume) was added, and the whole was stirred for 1 to 2 hours. The reaction solution was diluted with acetonitrile and was analyzed by HPLC.
The results reveal that the target A-fragment has a purity of 94.1% (tR=27.4), whereas the content of the de-tritylated by-product was 0.55% (tR=21.5) (see
(1) In a reaction container, H-Gly-O-Trt(2-Cl)-resin (122 mg) and DMF (4.5 mL) were placed, and the resin was allowed to swell for 20 minutes. After filtration, a 0.5M DMF solution of Fmoc-Leu-OH (0.8 mL, 0.4 mmol, 4 eq.), a 0.5M DMF solution of DIC (0.8 mL), and a 0.2M DMF solution of HOBt (2.0 mL) were added. The mixture was reacted by microwave (MW) irradiation at 75° C. for 5 minutes, and then the reaction solvent was removed. The residue was washed with DMF (18 mL), giving Fmoc-Leu-Gly-O-Trt(2-Cl)-resin.
(2) To the Fmoc-Leu-Gly-O-Trt(2-Cl)-resin, a 20% piperidine/DMF solution (4.5 mL) was added. After stirring for 3 minutes, the reaction solvent was removed, and a 20% piperidine/DMF solution (4.5 mL) was added. After stirring for 10 minutes, the reaction solvent was removed. The residue was washed with DMF (18 mL), giving H-Leu-Gly-O-Trt(2-Cl)-resin.
(3) To the H-Leu-Gly-O-Trt(2-Cl)-resin, a 0.5M DMF solution of Fmoc-Asn(Trt)-OH (0.8 mL), a 0.5M DMF solution of DIC (0.8 mL), and a 0.2M DMF solution of HOBt (2.0 mL) were added. The mixture was reacted by MW irradiation at 75° C. for 5 minutes, and then the reaction solvent was removed. The residue was washed with DMF (18 mL), giving Fmoc-Asn(Trt)-Leu-Gly-O-Trt(2-Cl)-resin.
(4) Subsequently, the deprotection and the Fmoc amino acid-coupling were repeated in the same manner as in (2) and (3) (the coupling reaction of Fmoc-His(Trt)-OH was performed at 50° C. for 10 minutes). Boc-Ser(tBu)-OH (4.0 eq.) as the last 12th residue was coupled in the same manner as in (1), and then the reaction solvent was removed. The residue was washed with MeOH (13.5 mL) and was dried under reduced pressure, giving side chain-protected AFR-resin (350 mg).
4. Cleavage of Protected Peptide from Resin and Purity Measurement
(5) To a sample (about 20 to 50 mg) of the side chain-protected AFR-resin, acetic acid/TFE/dichloromethane (acetic acid/TFE/dichloromethane=1/1/9 in terms of volume) was added, and the whole was stirred for 2 hours. The reaction solution was diluted with acetonitrile and was analyzed by HPLC. The results reveal that the target A-fragment has a purity of 66.1% (tR=27.9), whereas the content of the de-tritylated by-product was 7.5% (tR=22.1) (see
(1) Under an argon atmosphere, Cl-Trt(2-Cl)-resin (4.00 g), Fmoc-Phe-OH (6.32 g), DIEA (2.79 mL), and dichloroethane (28.0 mL) were placed in a reaction container. The mixture was stirred at room temperature for 3.5 hours and was washed with dichloroethane (28.0 mL) for 5 times.
(2) To the washed resin, MeOH (4.00 mL), DIEA (0.8 mL), and dichloroethane (28.0 mL) were added. After stirring for 20 minutes, the reaction solvent was removed. The residue was washed with DMF, dichloromethane, and DMF, giving Fmoc-Phe-O-Trt(2-Cl)-resin.
(3) To the Fmoc-Phe-O-Trt(2-Cl)-resin, a 20% piperidine/DMF solution (40.0 mL, 10 v/w) was added, then the whole was stirred for 20 minutes, and the reaction solvent was removed. The residue was washed with DMF (28.0 mL, 7 v/w, 5 times), dichloromethane (28.0 mL, 7 v/w, 5 times), and DMF (28.0 mL, 7 v/w, 5 times), giving H-Phe-O-Trt(2-Cl)-resin.
(4) In a flask, Fmoc-Asn(Trt)-OH (9.73 g, 16.3 mmol), HOBt (2.20 g), DIC (2.52 mL), and DMF (40.0 mL) were placed and stirred for 30 minutes. The solution was added to the H-Phe-O-Trt(2-Cl)-resin, then the flask was rinsed with DMF, and the DMF was added. The whole was stirred for 2 hours, and then the reaction solvent was removed.
(5) The resin was washed with DMF, giving Fmoc-Asn(Trt)-Phe-O-Trt(2-Cl)-resin.
(6) To the Fmoc-Asn(Trt)-Phe-O-Trt(2-Cl)-resin, a 20% piperidine/DMF solution (40.0 mL) was added, then the whole was stirred for 20 minutes, and the reaction solvent was removed. The residue was washed with DMF, dichloromethane, and DMF, giving H-Asn(Trt)-Phe-O-Trt(2-Cl)-resin.
(7) To the H-Asn(Trt)-Phe-O-Trt(2-Cl)-resin, Fmoc-His(Trt)-OH (1.01 g), HOBt (2.20 g), DIC (2.52 mL), and DMF (in such a volume as to enable stirring) were added, then the mixture was stirred for 2 hours or more, and the reaction solvent was removed.
(8) The resin was washed with DMF, dichloromethane, and DMF, giving Fmoc-His(Trt)-Asn(Trt)-Phe-O-Trt(2-Cl)-resin.
(9) Subsequently, the deprotection and the coupling were repeated in the same manner as in (4) and (5).
(10) After coupling of Fmoc-Arg(Pbf)-OH as the 15th residue, the Fmoc group was deprotected in the same manner as in (3), and the resin was washed with dichloromethane and MeOH and dried under reduced pressure, giving 15-residue peptide-resin (10.7 g).
6. Cleavage of Protected Peptide from Resin and Purity Measurement
(11) To a sample (about 20 to 50 mg) of the 15-residue peptide-resin, acetic acid/dichloromethane (acetic acid/dichloromethane=1/1 in terms of volume) was added, and the mixture was stirred for 1 to 2 hours. The reaction solution was diluted with acetonitrile and was analyzed by HPLC. The results of the product synthesized by using an M-Revo (registered trademark) in a part of the process (coupling for the 5th and subsequent residues) are shown in Table 11 and
(1) In a reaction container, H-Phe-O-Trt(2-Cl)-resin (179 mg) and DMF (4.5 mL) were placed, and the resin was allowed to swell for 20 minutes. After removal of the DMF, a 0.5M DMF solution of Fmoc-Asn(Trt)-OH (0.8 mL), a 0.2M DMF solution of DIC (2.0 mL), and a 0.5M DMF solution of Oxyma (0.8 mL) were added. The mixture was reacted by microwave (MW) irradiation at 75° C. for 5 minutes, and then the reaction solvent was removed. The residue was washed with DMF (18 mL), giving Fmoc-Asn(Trt)-Phe-O-Trt(2-Cl)-resin.
(2) To the Fmoc-Asn(Trt)-Phe-O-Trt(2-Cl)-resin, a 20% piperidine/DMF solution (4.5 mL) was added. After stirring for 3 minutes, the reaction solvent was removed, and a 20% piperidine/DMF solution (4.5 mL) was added. After stirring for 10 minutes, the reaction solvent was removed, and the residue was washed with DMF (18 mL), giving H-Asn(Trt)-Phe-O-Trt(2-Cl)-resin.
(3) To the H-Asn(Trt)-Phe-O-Trt(2-Cl)-resin, a 0.5M DMF solution of Fmoc-His(Trt)-OH (0.8 mL), a 0.5M DMF solution of DIC (0.8 mL), and a 0.2M DMF solution of Oxyma (2.0 mL) were added.
(4) The mixture was reacted by MW irradiation at 50° C. for 10 minutes, and then the reaction solvent was removed. The resin was washed with DMF (4.5 mL, 4 times), giving Fmoc-His(Trt)-Asn(Trt)-Phe-O-Trt(2-Cl)-resin.
(5) Subsequently, the deprotection and the Fmoc amino acid-coupling were repeated in accordance with the operations (2) to (4) (coupling reactions were performed by reaction with MW irradiation at 75° C. for 5 minutes except for the coupling of Fmoc-His(Trt)-OH).
(6) Fmoc-Glu(tBu)-OH as the 16th residue was coupled, then the Fmoc group was deprotected, and the resin was washed with dichloromethane and MeOH and was dried under reduced pressure, giving 16-residue peptide-resin.
4. Cleavage of Deprotected Peptide from Resin and Purity Measurement
(7) To a sample (about 20 mg) of the 16-residue peptide-resin, TFA/TIS/H2O/EDT (TFA/TIS/H2O/EDT=92.5/2.5/2.5/2.5 in terms of volume) (2 mL) was added, and the whole was stirred for 2 hours. After filtration, TFA was evaporated off, then ethyl acetate and water was added, and the mixture was allowed to separate into two layers. The aqueous layer was collected and was washed with ethyl acetate (twice). The aqueous layer was diluted with purified water and was analyzed by HPLC (HPLC purity: 63.4%) (see
(1) Under an argon atmosphere, Cl-Trt(2-Cl)-resin (10.0 g), Fmoc-Phe-OH (15.0 g), DIEA (6.75 mL), and dichloroethane (100 mL) were placed in a reaction container. The mixture was stirred using an M-Revo (registered trademark) for 3 hours or more, and then the reaction solvent was removed. DIEA (1.35 mL), MeOH (10 mL), and dichloromethane (70.0 mL) were added, and the mixture was stirred using the M-Revo (registered trademark) for 20 minutes under an argon atmosphere. The mixture was washed with DMF, dichloromethane, and DMF, giving Fmoc-Phe-O-Trt(2-Cl)-resin.
(2) To the Fmoc-Phe-O-Trt(2-Cl)-resin, a 20% piperidine/DMF solution in such a volume as to enable stirring (about 10 v/w) was added. The mixture was stirred using the M-Revo (registered trademark) for 20 minutes, and then the reaction solvent was removed. The residue was washed with DMF, dichloromethane, and DMF, giving H-Phe-O-Trt(2-Cl)-resin.
(3) In a flask, Fmoc-Asn(Trt)-OH (23.1 g), HOBt (5.24 g), DIC (6.00 mL), and DMF (70.0 mL) were placed, and the whole was stirred using an M-Revo (registered trademark) for 30 minutes or more.
(4) The solution prepared in (3) was added to the H-Phe-O-Trt(2-Cl)-resin, and the mixture was stirred using the M-Revo (registered trademark) for 2 hours or more.
(5) The reaction solvent was removed, and the resin was washed with DMF, dichloromethane, and DMF, giving Fmoc-Asn(Trt)-Phe-O-Trt(2-Cl)-resin.
(6) Subsequently, the deprotection and the coupling were repeated in the same manner as in (2) to (5). For the 10th residue (Fmoc-Arg(Pbf)-OH), the 15th residue (Fmoc-Arg(Pbf)-OH), the 17th residue (Fmoc-Met-OH), the 21st residue (Fmoc-His(Trt)-OH), and the 22nd residue (Fmoc-Lys(Boc)-OH), double coupling was performed. For the 16th residue (Fmoc-Glu(tBu)-OH), triple coupling was performed, and for the 19th residue (Fmoc-Arg(Pbf)-OH), quadruple coupling was performed.
(7) After the coupling of Fmoc-Lys(Boc)-OH as the 22nd residue, the Fmoc group was deprotected in the same manner as in (2), and the resin was washed with dichloromethane and MeOH and was dried under reduced pressure, giving side chain-protected BFR-resin (78.48 g).
4. Cleavage of Protected Peptide from Resin and Purity Measurement
(8) To a sample (about 20 mg) of the side chain-protected BFR-resin, acetic acid/dichloromethane (acetic acid/dichloromethane=1/9 in terms of volume) was added, and the whole was stirred for 2 hours. The reaction solution was diluted with purified water/acetonitrile and was analyzed by HPLC (HPLC purity: 92.0%) (see
(1) Under an argon atmosphere, Cl-Trt(2-Cl)-resin (2.00 g), Fmoc-Phe-OH (2.5 eq.), DIEA (2.5 eq.), and dichloroethane (about 10 v/w) were placed in a reaction container. The mixture was stirred using a shaker for 3 hours or more, and then the reaction solvent was removed. DIEA (0.5 eq.), MeOH (2.0 mL), and dichloromethane (20 mL) were added, and the whole was stirred using a shaker for 20 minutes. The mixture was washed with DMF (20 mL), giving Fmoc-Phe-O-Trt(2-Cl)-resin.
(2) To the Fmoc-Phe-O-Trt(2-Cl)-resin, a 20% piperidine/DMF solution (14 mL) was added. The mixture was stirred using the shaker for 20 minutes, and then the reaction solvent was removed. The residue was washed with DMF, dichloromethane, and DMF, giving H-Phe-O-Trt(2-Cl)-resin.
(3) In a flask, Fmoc-Asn(Trt)-OH (2.5 eq.), HOBt (2.5 eq.), DIC (2.5 eq.), and DMF (18.0 mL) were placed, and the whole was stirred using the shaker for 30 minutes or more.
(4) The solution prepared in (3) was added to the H-Phe-O-Trt(2-Cl)-resin, then the whole was stirred using the shaker for 2 hours or more, and the reaction solvent was removed. The resin was washed with DMF (20.0 mL), giving Fmoc-Asn(Trt)-Phe-O-Trt(2-Cl)-resin.
(5) Subsequently, the deprotection and the Fmoc-amino acid coupling were repeated in accordance with the operations (2) to (4).
(6) After the coupling of Fmoc-Lys(Boc)-OH as the 22nd residue, the Fmoc group was deprotected in the same manner as in (2), and the resin was washed with MeOH (20 mL) and was dried under reduced pressure, giving side chain-protected BFR-resin (12.18 g).
4. Cleavage of Protected Peptide from Resin and Purity Measurement
(7) To the side chain-protected BFR-resin (7.59 g), a degassed Cleavage mixture (76 mL) was added, and the whole was stirred under an argon atmosphere using the shaker for 2 hours.
(8) The resin was further washed with Cleavage mixture (38 mL) and dichloromethane (76 mL).
(9) To the reaction solution, hexane (760 mL) was added, then the mixture was concentrated under reduced pressure, and dichloromethane (15 mL) was added to dissolve crystals. To the solution, IPE (380 mL) was added to precipitate crystals, and the crystals were collected by pressure filtration.
(10) The crystals were dried under reduced pressure, then the resulting crystals of the side chain protected B-fragment were dissolved in purified water/acetonitrile, and the solution was analyzed by HPLC (HPLC purity: 63.8%). The results reveal that the target B-fragment has a purity of 63.8% (tR=28.4), whereas the content of the de-tritylated by-product is 9.2% (tR=24.2) (see
(1) In a reaction container, H-Phe-O-Trt(2-Cl)-resin (118 mg) and DMF (4.5 mL) were placed, and the resin was allowed to swell for 20 minutes. After removal of the DMF, a 0.5M DMF solution of Fmoc-Asn(Trt)-OH (0.8 mL), a 0.5M DMF solution of DIC (0.8 mL), and a 0.2M DMF solution of HOBt (2.0 mL) were added, then the mixture was reacted by microwave (MW) irradiation at 75° C. for 5 minutes, and the reaction solvent was removed. The resin was washed with DMF (18 mL), giving Fmoc-Asn(Trt)-Phe-O-Trt(2-Cl)-resin.
(2) To the Fmoc-Asn(Trt)-Phe-O-Trt(2-Cl)-resin, a 20% piperidine/DMF solution (4.5 mL) was added, then the whole was stirred for 3 minutes, and the reaction solvent was removed. A 20% piperidine/DMF solution (4.5 mL) was further added, then the whole was stirred for 10 minutes, and the reaction solvent was removed. The resin was washed with DMF (18 mL), giving H-Asn(Trt)-Phe-O-Trt(2-Cl)-resin.
(3) To the H-Asn(Trt)-Phe-O-Trt(2-Cl)-resin, a 0.5M DMF solution of Fmoc-His(Trt)-OH (0.8 mL), a 0.5M DMF solution of DIC (0.8 mL), and a 0.2M DMF solution of HOBt (2.0 mL) were added.
(4) The whole was reacted by MW irradiation at 50° C. for 10 minutes, and then the reaction solvent was removed. The resin was washed with DMF (18 mL), giving Fmoc-His(Trt)-Asn(Trt)-Phe-O-Trt(2-Cl)-resin.
(5) Subsequently, the deprotection and the Fmoc-amino acid coupling were repeated in accordance with the operations (2) to (4) (coupling reactions were performed by reaction with MW irradiation at 75° C. for 5 minutes except for the coupling of Fmoc-His(Trt)-OH).
(6) After the coupling of Fmoc-Lys(Boc)-OH as the 22nd residue, the Fmoc group was deprotected in the same manner as in (2), and the resin was washed with dichloromethane and MeOH and was dried under reduced pressure, giving side chain-protected BFR-resin.
4. Cleavage of Protected Peptide from Resin and Purity Measurement
(7) To a sample (about 20 mg) of the side chain-protected BFR-resin, Cleavage mixture (2 mL) was added, and the whole was stirred for 2 hours. The reaction solution was diluted with acetonitrile and was analyzed by HPLC. The results reveal that the target B-fragment has a purity of 75.5% (tR=20.4), whereas the content of the de-tritylated by-product is 7.9% (tR=7.9) (see
The results of Experimental Examples 5 to 8 and Comparative Examples 3 to 5 are shown in Table 17.
The results demonstrate that the production method of the present invention enables mass production of high-purity long-chain peptides. The production method of the present invention is also demonstrated to suppress the generation of a de-tritylated product of an intermediate fragment in solid phase peptide synthesis. In other words, the production method of the present invention is demonstrated to enable mass synthesis of high-purity long-chain peptides while suppressing side reactions.
(1) In a reaction container, Wang resin (para-methoxybenzyl alcohol resin, 5.0 g) and DMF (35 mL) were placed, and the resin was allowed to swell. After removal of the DMF, Fmoc-Ala-OH (2.41 g, 2.5 eq.), HOBt (1.05 g, 2.5 eq.), DMF (35 mL), and DIC (1.2 mL, 2.5 eq.) were added.
(2) The mixture was centrifugal-stirred using an M-Revo (registered trademark) for 2 hours or more.
(3) The reaction solvent was removed, and the Fmoc-Ala-OH-introduced resin was washed using the M-Revo (registered trademark) with DMF (35 mL), dichloromethane (35 mL), and DMF (35 mL).
(4) To the resulting Fmoc-Ala-Wang-resin, 20% piperidine/DMF (35 mL) was added.
(5) The mixture was centrifugal-stirred using the M-Revo (registered trademark) for 20 minutes or more.
(6) The reaction solvent was removed, and the residue was washed using the M-Revo (registered trademark) with DMF (35 mL), dichloromethane (35 mL), and DMF (35 mL).
(7) Kaiser Test was performed to ascertain coloration of the resin beads.
(8) H-Ala-Wang-resin was obtained.
(9) Into the reaction container in (8), Fmoc-Ala-OH (2.41 g, 2.5 eq.), HOBt (1.05 g, 2.5 eq.), DMF (35 mL), and DIC (1.2 mL, 2.5 eq.) were added.
(10) The mixture was centrifugal-stirred using the M-Revo (registered trademark) for 1 hour or more.
(11) The reaction solvent was removed, and the Fmoc-Ala-OH-introduced resin was washed using the M-Revo (registered trademark) with DMF (35 mL), dichloromethane (35 mL), and DMF (35 mL).
(12) A small amount of the Fmoc-Ala-OH-introduced resin was sampled and subjected to Kaiser Test, and no coloration of the resin beads was detected. If resin beads were colored by Kaiser Test, the operations (9) to (11) were repeated until the resin beads were not colored by Kaiser Test.
(13) The operations (4) to (12) were performed until Boc-Ala-Ala-Ala-Ala-Ala-Wang-resin was obtained. As the N-terminal amino acid, Boc-Ala-OH was introduced.
(14) After the coupling of Boc-Ala-OH, the product was washed with dichloromethane (35 mL) and MeOH (35 mL) and was dried under reduced pressure, giving the following Boc-Ala-Ala-Ala-Ala-Ala-Wang-resin.
4. Cleavage of Peptide from Resin
(15) To the Boc-Ala-Ala-Ala-Ala-Ala-Wang-resin, TFA/TIS/H2O (TFA/TIS/H2O=95/2.5/2.5 in terms of volume) (35 mL) was added, and the whole was shaken for 2 hours.
(16) The reaction solution was concentrated under reduced pressure and crystallized with IPE (250 mL).
(17) The crystals were filtered under reduced pressure.
(18) The crystals were dried at room temperature under reduced pressure, giving the following H-Ala-Ala-Ala-Ala-Ala-OH.TFA salt (604 mg).
(1) In a reaction container, Wang-resin (0.50 g) and DMF (5 mL) were placed, and the resin was allowed to swell. After removal of the DMF, Fmoc-Ala-OH (775 mg, 6 eq.), HOBt (337 mg, 6 eq.), DMF (2.5 mL), and DIC (386 μL, 6 eq.) were added.
(2) The mixture was shaken using a shaker for 2 hours or more.
(3) The reaction solvent was removed, and the Fmoc-Ala-OH-introduced resin was washed using a shaker with DMF (5 mL), dichloromethane (5 mL), and DMF (5 mL).
(4) To the resulting Fmoc-Ala-Wang-resin, 20% piperidine/DMF (5.5 mL) was added.
(5) The mixture was shaken using a shaker for 20 minutes or more.
(6) The reaction solvent was removed, and the residue was washed using a shaker with DMF (5 mL), dichloromethane (5 mL), and DMF (5 mL).
(7) Kaiser test was performed to ascertain coloration of the resin beads.
(8) H-Ala-Wang-resin was obtained.
(9) Into the reaction container in (8), Fmoc-Ala-OH (386 mg, 2.5 eq.), HOBt (168 mg, 2.5 eq.), DMF (5.5 mL), and DIC (206 μL, 2.5 eq.) were added.
(10) The mixture was shaken using a shaker for 1 hour or more.
(11) The reaction solvent was removed, and the Fmoc-Ala-OH-introduced resin was washed using a shaker with DMF (5 mL), dichloromethane (5 mL), and DMF (5 mL).
(12) A small amount of the Fmoc-Ala-OH-introduced resin was sampled and subjected to Kaiser Test, and no coloration of the resin beads was detected. If resin beads were colored by Kaiser Test, the operations (9) to (11) were repeated until the resin beads were not colored by Kaiser Test.
(13) The operations (4) to (12) were performed until Boc-Ala-Ala-Ala-Ala-Ala-Wang-resin was obtained. The protected amino acid (N-terminal amino acid) used for the last coupling reaction was Boc-Ala-OH.
(14) After the coupling of Boc-Ala-OH, the product was washed with dichloromethane (5 mL) and MeOH (5 mL) and was dried under reduced pressure, giving Boc-Ala-Ala-Ala-Ala-Ala-Wang-resin (0.68 g).
4. Cleavage of Deprotected Peptide from Resin
(15) To the Boc-Ala-Ala-Ala-Ala-Ala-Wang-resin, TFA/TIS/H2O (TFA/TIS/H2O=95/2.5/2.5 in terms of volume) (5 mL) was added, and the whole was shaken for 2 hours.
(16) After removal of the resin, the reaction solution was concentrated under reduced pressure, and to the residue, IPE (25 mL) was added to precipitate crystals.
(17) The crystals were filtered under reduced pressure.
(18) The crystals were dried at room temperature under reduced pressure, giving H-Ala-Ala-Ala-Ala-Ala-OH.TFA salt (60.7 mg).
The HPLC analysis results of acetonitrile solutions of the products of Experimental Example 9 and Comparative Example 6 are shown in Table 17 and
HPLC conditions
Column: Waters X Bridge
Mobile phase: 0.1% aqueous TFA
Analysis time: about 10 minutes
Flow rate: 1 mL/min
Detector: UV 220 nm
The results demonstrate that the production method of the present invention enables mass production of high-purity long-chain peptides.
The production method of the present invention is useful for peptide production. The method is specifically useful for mass synthesis of a long-chain peptide while suppressing side reactions.
| Number | Date | Country | Kind |
|---|---|---|---|
| 2017-072780 | Mar 2017 | JP | national |
| Filing Document | Filing Date | Country | Kind |
|---|---|---|---|
| PCT/JP2018/013147 | 3/29/2018 | WO | 00 |
