TECHNICAL FIELD OF THE INVENTION
The present invention relates to a method of identifying proteins that can be used for searching for antimicrobial agents and to a method of screening for agents by targeting these proteins.
DESCRIPTION OF THE RELATED ART
Metabolism, growth, and environmental adaptation of many bacteria are regulated by a group of genes closely related with each other. The products of these genes, which are referred to as “feast/famine regulatory proteins (FFRPs)”, bind to promoter regions in genomic DNAs and efficiently regulate transcription of genes positioned downstream. The term “FFRPs” was proposed by the present inventors by referring to “feast/famine regulation”, an expression (Nonpatent Document 1) used to summarize the function of the leucine-responsive regulatory protein (Lrp) of Escherichia coli, a protein in this group. When sensing an increase in the nutrition outside through a high concentration of leucine, E. coli pauses its motility, initiates active transport of nutrients from outside, shifts its metabolism to a more heterotrophic mode, and initiates its growth, eventually changing its infectivity. Another E. coli protein, the asparagine synthesis C gene product (AsnC) senses an increase in the nutrition outside through high concentration of asparagine and regulates biosynthesis of asparagine and growth of the bacterium. The amino acid sequence of AsnC resembles that of Lrp, and thus AsnC too is classified into the group of FFRPs. E. coli has a third FFRP whose function is yet unknown.
Pseudomonas aeruginosa opportunistically infects people whose defensibility is weakened, i.e., those who are suffering from cancer, burn injuries, immune disorder, or the like, and causes serious diseases, such as sepsis and cystic fibrosis, sometimes leading to death of the patient. P. aeruginosa adopts abilities to resist various antibiotics and disinfectants. The multi-drug resistancy of P. aeruginosa has caused serious inside hospital infections not only in developing countries but also in advanced countries. In an attempt to unravel the infection mechanism of P. aeruginosa, the genomic sequence of its standard strain PAO1 has been determined and published under international collaboration (Nonpatent Document 2). However, to date, this has not lead to development of effective agents.
Whereas most other pathogenic bacteria are parasitic and can only survive inside their hosts, P. aeruginosa adapts to and grows in various environments, those in water and soil, and those inside plants and animal tissues, and so on. Bacteria of the species P. aeruginosa communicate with each other by transmitting signals and their characteristics change largely once the number of the bacteria reaches a certain threshold. This mechanism called “quorum sensing” is rarely found with other bacterial species and in some sense comparable with intercellular signaling inside multicellular organisms such as humans. It is likely that this remarkable environmental adaptability of the organism, together with its opportunistic infectivity (i.e. its ability to change depending on host susceptibly) and its multi-drug resistancy (i.e. its ability to change by responding to drugs), all are of the same type of abilities, and underneath all these lying is an efficient mechanism of regulating transcription of a number of genes in various ways.
The present inventors have identified eight FFRPs (Nonpatent Document 3), by using the genomic sequence of P. aeruginosa publicly available. No FFRP has been found coded in many parasitic pathogens, and this can be a reflection of the fact that these pathogens are dependent on nutrition present inside their hosts and do not regulate their metabolisms. In contrast, the number of FFRPs of P. aeruginosa, i.e., eight, is the largest among eubacteria so far examined, strongly suggesting involvement of these proteins in the efficient transcription regulatory mechanism of P. aeruginosa. So far, no evidence has been found to prove direct involvement of FFRPs in multi-drug resistance or opportunistic infectivity of the organism. Even so, FFRPs will regulate the metabolism of P. aeruginosa as does that of E. coli, and thus, regardless of the detailed function of FFRPs, FFRPs are potential targets for designing drugs that can terminate growth of P. aeruginosa or eradicate this organism.
[Nonpatent Document 1]
- Calvo, J. M., and Matthews, R. G., 1994, Microb. Rev., 58, pp. 466-490
[Nonpatent Document 2]
- Stover, C. K. et al., 2000, Nature, 401, pp. 959-964
[Nonpatent Document 3]
- Koike, H. et al., 2003, Proc. Japan. Acad., 79B, pp. 63-69
[Problems to be Solved by the Invention]
An object of the present invention is to identify the FFRPs which are potential targets while screening for antimicrobial agents and to provide a novel system for developing agents by using the identified target FFRPs, in particular, a novel method for developing agents acting against P. aeruginosa.
[Means for Solving the Problems]
The present inventors have identified eight FFRPs of P. aeruginosa and have completed a multiple alignment (FIG. 1) by comparing the amino acid sequences of the P. aeruginosa FFRPs with those of FFRPs from other bacteria, in particular by analyzing possibilities of these sequences to form a particular set of secondary structural elements. In addition, the present inventors have crystallized an archaeal FFRP (pot1216151) in complex with a ligand, and, by using the 3D coordinates determined thereof, have identified the geometries of the amino acid side chains which will interact with pharmaceutical agents. Based on these findings, the inventors have identified, in the eight FFRPs of P. aeruginosa, the positions and types of amino acid residues with which agents to be developed to act against P. aeruginosa will interact. Furthermore, in order to minimize potential interaction of agents to be developed with E. coli in human body, the phylogenetic relationship of the P. aeruginosa FFRPs with FFRPs of other bacteria has been analyzed thereby identifying FFRPs of P. aeruginosa closely related with E. coli Lrp.
The present invention provides a method of identifying a target protein for its use in screening for an antimicrobial agent, which comprises:
- 1) from the amino acid sequences of all open reading frames identified using the genomic sequence of a target bacterium, selecting amino acid sequences having homologies of 20% or higher to one of feast/famine regulatory proteins (FFRPs) having amino acid sequences set forth in SEQ ID NOS. 9 to 31;
- 2) from the amino acid sequences selected in step 1), excluding any amino acid sequence that does not match with a multiple alignment by forming the same secondary structural elements, the multiple alignment being shown in FIG. 1; and
- 3) identifying a protein, which has an amino acid sequence obtained through steps 1) and 2), as the target protein for its use in the screening for the antimicrobial agent.
The above-described method may further comprise the step of excluding any amino acid sequence phylogenetically related with one of the E. coli FFRPs having amino acid sequences set forth in SEQ ID NOS. 9 to 11, by a bootstrap value of 900/1,000 or higher.
In step 1), amino acid sequences having, for example, FASTA Z scores of 180 or higher to one of FFRPs having amino acid sequences set forth in SEQ ID NOS. 9 to 31 may be selected.
In step 2), for example, any amino acid sequence that is unlikely to form α helices in five regions 34 to 43, 59 to 66, 70 to 82, 126 to 135, and 170 to 180 or β strands in five regions 90 to 96, 109 to 117, 142 to 148, 154 to 160, and 193 to 205 is excluded from the amino acid sequences selected by step 1), wherein these positions are identified using the numbering scheme shown in the multiple alignment in FIG. 1.
The present invention provides also a method of screening for an antimicrobial agent, which comprises the step of selecting a chemical compound as a candidate of the agent, wherein the chemical compound is able to bind specifically to a protein identified by the method described above or to its assembly, thereby altering the three-dimensional structure or the assembly form of the protein.
In an embodiment, the above-described method becomes a method of screening for an antimicrobial agent acting against Pseudomonas aeruginosa, which comprises the step of selecting a chemical compound as a candidate of the antimicrobial agent, wherein said chemical compound is able to bind specifically to a target protein or its assembly, thereby altering the three-dimensional structure or the assembly form of the protein, wherein the target protein is either
- i) a protein having an amino acid sequence set forth in one of SEQ ID NOS. 1 to 8; or
- ii) a protein which is derived from Pseudomonas aeruginosa, related to an amino acid sequence set forth in one of SEQ ID NOS. 1 to 8 by deletion, substitution, or insertion of up to several amino acid residues, and is able to act as an FFRP.
In another embodiment, the above-described method becomes a method of screening for an antimicrobial agent acting against Pseudomonas aeruginosa, which comprises the step of selecting a chemical compound as a candidate of the antimicrobial agent, said chemical compound being able to bind specifically to a target protein having an amino acid sequence set forth in one of SEQ ID NOS. 1 to 8 or its assembly, thereby altering the three-dimensional structure or the assembly form of the target protein.
In yet another embodiment, the method may be a method of screening for an antimicrobial agent acting against Pseudomonas aeruginosa, which comprises the step of selecting a chemical compound as a candidate of the antimicrobial agent, said chemical compound being able to bind specifically to a target protein having an amino acid sequence set forth in one of SEQ ID NOS. 1 to 7 or its assembly, thereby altering the three-dimensional structure or the assembly form of the target protein.
In the screening method of the present invention, for example, the chemical compound may be selected on the basis of interaction between the chemical compound and at least one of thirty-two amino acid residues in the target protein, said thirty-two amino acid residues being found at positions 113, 116, 119, 120, 126, 144, 145, 147, 148, 149, 150, 152, 153, 154, 155, 166, 169, 173, 176, 177, 181, 183, 185, 193, 195, 196, 197, 198, 199, 200, 201, and 202, respectively, wherein these positions are identified using FIG. 1.
Alternatively, the chemical compound is selected on the basis of interaction between the chemical compound and at least one of eighteen amino acid residues in the target protein, said eighteen amino acid residues being found at positions 113, 126, 147, 148, 149, 150, 152, 153, 154, 155, 176, 177, 181, 196, 197, 198, 199, and 202, respectively, wherein these positions are identified using FIG. 1.
Alternatively, the chemical compound is selected on the basis of interaction between the chemical compound and at least one of seven amino acid residues in the target protein, said seven amino acid residues being found at positions 147, 154, 169, 181, 199, 200, and 201, respectively, wherein these positions are identified using FIG. 1.
Alternatively, the chemical compound is selected on the basis of interaction between the chemical compound and at least one of seven amino acid residues in the target protein, said seven amino acid residues being found at positions 147, 149, 154, 169, 173, 200, and 202, respectively, wherein these positions are identified using FIG. 1.
Alternatively, the chemical compound is selected on the basis of interaction between the chemical compound and at least one of twenty-eight amino acid residues in the target protein, said twenty-eight amino acid residues being found at positions 116, 119, 120, 126, 144, 145, 147, 148, 149, 150, 152, 153, 154, 166, 169, 173, 177, 181, 183, 185, 193, 195, 196, 197, 198, 199, 200, and 201, respectively, wherein these positions are identified using FIG. 1.
DESCRIPTION OF THE EMBODIMENTS
The present invention will now be described in detail.
1. Feast/Famine Regulatory Proteins (FFRPs)
In the present invention, the term “FFRPs” refers to proteins that regulate metabolism, growth, and infectivity of bacteria in response to changes in nutritional conditions outside. This term was derived from an expression, “feast/famine regulation”, used to summarize function of E. coli leucine-responsive regulatory protein (Lrp), a protein in this group. It has been identified that E. coli has three FFRPs: Lrp, AsnC, and a third FFRP of unknown function. FFRPs have been found in many other bacteria, such as those belonging to the genus Pyrococcus and the genus Sulfolobus.
FFRPs function by binding to promoter DNA regions positioned upstream of genes regulated by FFRPs, thereby activating or inactivating transcription of these genes. It is believed that association to or dissociation from promoter regions by FFRPs is regulated by the small molecules that reflect the nutritional conditions outside and that these small molecules introduce structural changes to the FFRPs, thereby affecting their abilities to bind to the promoter DNAs. The present invention relates to a method of screening for pharmaceutical agents that bind specifically to FFRPs thereby introducing structural changes, and thus able to regulate metabolism, growth, or infectivity of bacteria. In the present invention the term “antimicrobial agent” refers to “an agent interacting with a bacterium thereby regulating one of metabolism, growth, and infectivity of the bacterium and terminating its growth or eradicating the bacterium”. In particular, the present invention provides a method of screening for agents that can act against P. aeruginosa by targeting the P. aeruginosa FFRPs identified in this application.
2. Method of Identifying Target Proteins (FFRPs)
The present invention provides a method of identifying a target protein for its use in screening for an antimicrobial agent, which comprises the steps of:
- 1) from the amino acid sequences of all open reading frames identified using the genomic sequence of a target bacterium, selecting amino acid sequences having homologies of 20% or higher to one of feast/famine regulatory proteins (FFRPs) having amino acid sequences set forth in SEQ ID NOS. 9 to 31;
- 2) from the amino acid sequences selected in step 1), excluding any amino acid sequence that does not match with a multiple alignment by forming a particular set of secondary structural elements, the multiple alignment being shown in FIG. 1; and
- 3) identifying a protein, which has an amino acid sequence obtained through steps 1) and 2), as the target protein for use in the screening for the antimicrobial agent.
2.1. Homology Search
Step 1 is a step of selecting amino acid sequences homologous to those of known FFRPs by using information obtained from a genomic sequence. This step may be performed using a homology search program, such as BLAST, FASTA, PSI-BLAST, or SSEARCH. The threshold is preferably set to a relatively low level so that no FFRP is overlooked. For example, if FASTA program is used, a low Z score, such as approximately 180, can be used as a threshold.
2.2. Multiple Alignment
Step 2) is a step of excluding amino acid sequences that do not form the same set of secondary structural elements as those formed by known FFRPs by using the multiple alignment (FIG. 1) made by the present inventors.
The multiple alignment shown in FIG. 1 is an improvement of an initial version made using a program such as CLUSTALW, PAM, or MultAlin. In each set of positions equivalent between proteins, the number of positions occupied by the same type of amino acid residues has been maximized. In order to confirm that regions equivalent between different proteins will form the same secondary structural elements and the same 3D structures, the following requirements have been satisfied:
- 1) inside regions predicted to form a-helices, hydrophobic residues should be best positioned in the same phases;
- 2) inside regions predicted to form secondary structural elements, amino acid residues that might prevent formation of these elements should best be avoided;
- 3) neither deletion nor insertion of amino acid residues will be found at the midst of regions predicted to form α helices;
- 4) proline, glycine, and tryptophan should best occupy the same positions among the FFRPs.
Theoretical identification of proteins is a process of finding, in a genomic sequence, candidate blocks whose sequences resemble a referential amino acid sequence. If a threshold used for judging resemblance is fixed too high, no candidate will be qualified. If the threshold is fixed too low, all the candidates will be qualified. Selecting an appropriate threshold is thus important and this process of fixing the threshold largely depends on experience. In addition, it is also difficult to align more than two amino acid sequences by matching sets of residues with each other. Furthermore, resembling or not resembling between twenty types of amino acid residues depends on the context, i.e., the function expected for the position. For example, arginine and glutamic acid have opposite electron charges, and thus they are different. However, both are hydrophilic and are often positioned on the surface of a protein. Once the arginine side chain is neutralized by electrostatic interactions with another amino acid side chain, the “stem” composed of hydrocarbons will behave in ways similar to the side chains of hydrophobic amino acid residues such as leucine. The multiple alignment such as the one shown in FIG. 1 can be produced only on the basis of an accumulation of experiences and by applying high analytic skills.
Amino acid sequences that do not form the same set of secondary structures shown along the multiple alignment in FIG. 1 are thus excluded. Namely, amino acid sequences that are not expected to form α helices in five regions 34-43, 59-66, 70-82, 126-135, and 170-180, or β strands in five regions 90-96, 109-117, 142-148, 154-160, and 193-205 are excluded.
2.3. Phylogenetic Relation
Various types of similarities are found between proteins. For example, human hemoglobin and porcine hemoglobin have essentially the same function but have differences originated in speciation between humans and swine. Proteins related by such similarity are defined as orthologous to each other. Proteins orthologous to each other are essentially interchangeable. Until recently, porcine insulin was used to treat patients replacing human insulin. During the Second World War, even tuna insulin was used. On the other hand, the similarity found between human hemoglobin and human myoglobin is of a different type. Functions of these proteins have deviated from each other and the proteins are not interchangeable. Proteins related by such similarity are called to be paralogous to each other. The group of FFRPs is a mixture of proteins orthologous or paralogous to each other.
By comparing FFRPs of two or more bacterial species and by screening for chemical compounds acting against FFRPs shared by these species, the method of the present invention can be used in order to develop agents able to act against a desired wide variety of bacteria. Alternatively, by screening for an FFRP present in a particular bacterial species only, pharmaceutical agents specifically acting against the species can be developed. For example, in order to develop an agent not interactive with the human symbiont E. coli, the method of the present invention may include the step of excluding the amino acid sequences that closely resemble the amino acid sequences (SEQ ID NOS. 9 to 11) of E. coli FFRPs.
“Orthologous/paralogous” relationships between FFRPs can be identified by analyzing their phylogeny. Phylogeny can be analyzed by using commercially available software, such as that in the PHYLIP package, while keeping the alignment shown in FIG. 1 unchanged. Preferably, a threshold usable for excluding remote proteins is a bootstrap value of approximately 900/1,000 or higher.
A bootstrap value is a measure for evaluating homogeneity of data from which a conclusion is deduced. Here, this value defines the number of trials in which the same diversification at a node is concluded out of 1,000 trials, while effectively changing a weight given to each amino acid position used for determining similarity. A pair of proteins related by a bootstrap value close to 1,000 are concluded to be phylogenically close.
3. FFRPs from P. aeruginosa
By using the method of the present invention, eight FFRPs were identified as coded in the genome of the standard strain PAO1 of P. aeruginosa (Stover, C. K. et al., 2000, Nature 406, 959-964):
- Ps5047278 (SEQ ID NO. 1), Ps4445486 (SEQ ID NO. 2),
- Ps2472442 (SEQ ID NO. 3), Ps2291589 (SEQ ID NO. 4),
- Ps2220251 (SEQ ID NO. 5), Ps2914358 (SEQ ID NO. 6),
- Ps5372266 (SEQ ID NO. 7), and Ps5977610 (SEQ ID NO. 8).
As has been discussed earlier in this specification, P. aeruginosa easily mutates, thereby acquiring resistance to drugs. Therefore, these FFRPs determined using the genomic sequence of the standard strain PAO1 of P. aeruginosa may also be mutated. The present invention also concerns modified proteins having amino acid sequences mutated from those described above by deletion, substitution, or insertion of up to several amino acid residues, when the modified proteins retain their function as FFRPs.
In order to maintain the original 3D structure, the above-described deletion, substitution, or insertion should not affect formation of the five a helices or five β strands at the regions indicated in FIG. 1. It is preferable that no deletion, substitution, or insertion should occur at amino acid positions that will interact with the pharmaceutical agents, i.e., positions 113, 116, 119, 120, 126, 144, 145, 147, 148, 149, 150, 152, 153, 154, 155, 166, 169, 173, 176, 177, 181, 183, 185, 193, 195, 196, 197, 198, 199, 200, 201, and 202 shown in FIG. 1.
By analyzing phylogeny between FFRPs of P. aeruginosa and E. coli, for reasons it has been confirmed that Ps5977610 is an ortholog of E. coli Lrp, with the bootstrap value being higher than 900. Thus, Ps5977610 (SEQ ID NO. 8) should better not be used as the target for developing pharmaceutical agents to be administered to humans in order to minimize possible effects of the agents on the human symbiont E. coli.
4. Method of Screening for Antimicrobial Agents
A general expectation is that upon transcription regulation by FFRPs small molecules (i.e., ligands) signaling the nutritional conditions outside bind to FFRPS, and change the 3D structure of FFRPs thereby changing the abilities of the FFRPs to bind promoter DNA regions. In other words, a chemical compound able to alter the 3D structure or the assembly form of an FFRP can be used as an antimicrobial agent, which will affect, via modification of transcription regulation by the FFRP, metabolism, growth, or infectivity of the bacterium.
The present invention provides a method of screening for antimicrobial agents, which will bind to a target protein identified by the present invention or its assembly, thereby changing the 3D structure or the assembly form of the target protein, where the target protein and its assembly are the target FFRP and its assembly.
The screening method of the present invention may include either any known ligand-screening system for characterizing changes in the 3D structure or the assembly form of an FFRP upon adding a ligand candidate (e.g., gel filtration, sedimentation coefficient measurement, or the like), or a virtual screening method using a computer.
4.1 3D Structural Information
The structure of an Lrp-like protein (i.e. an FFRP) derived from Pyrococcus furiosus and crystallized in the absence of any ligand and the secondary structural composition of the protein have been reported (Philip M. Leonard, et al., 2001, The EMBO Journal, vol. 20, No. 5, pp. 990-997). With the quality of these data being poor (i.e. an R-factor of approximately 30% or higher at a resolution of approximately 3 Å), the conformations of amino acid side chains, which are important for screening for ligands have not been specified.
The present inventors have succeeded in crystallizing another FFRP (pot1216151) in complex with a ligand, the FFRP being one of the fourteen FFRPs derived from Pyrococcus sp. OT3 (a.k.a. Pyrococcus horikoshii or Pyrococcus shinkaii, Japan Collection of Microorganisms, JCM Registration No. 9974). The 3D structure of the FFRP-ligand complex has been determined at a high resolution using an X-ray diffraction method. To date, this is the single 3D structure of any FFRP determined in complex with a ligand. With the high quality, i.e., R-factor of 21% at a resolution of 1.8 Å, this is the single structure of any FFRP where the accurate positions of amino acid side chains interacting with a ligand are determined.
Table 1 shows the 3D coordinates of pot1216151 determined by the present inventors. These 3D coordinates, or a graphical representation or numerical information derived from the 3D coordinates can provide the 3D structural information necessary for searching for a ligand able to interact with an FFRP. Such 3D structural information includes information concerning both the monomer and its assembly, and also information concerning both the protein alone and the protein in complex with the ligand.
In the present invention, the information, in particular, concerning “the gaps” or “the hole” formed upon assembling of FFRP molecules is useful. Here, “gap” refers to an empty space created between a pair of FFRP monomers, between their atoms, or between their amino acid residues, and “hole” refers to a larger empty space formed at around the center of the assembly. Such information is important for characterizing binding to FFRPs of ligands to be screened.
By using the sequence alignment shown in FIG. 1, the 3D information obtained from Table 1 becomes applicable to other FFRPs. In particular, information concerning amino acid residues facing the “hole” or the “gaps” in the assembly, which are ligand-binding positions, is provided. In this way, the present inventors have specified thirty-two positions of bacterial FFRPs, these positions being potential targets of pharmaceutical agents: 113, 116, 119, 120, 126, 144, 145, 147, 148, 149, 150, 152, 153, 154, 155, 166, 169, 173, 176, 177, 181, 183, 185, 193, 195, 196, 197, 198, 199, 200, 201 and 202 (FIG. 3), wherein these positions are identified using FIG. 1.
Of the above-described positions, the following eighteen positions (FIG. 6) are the positions, in pot1216151, identified as interacting with two molecules of an unidentified assembly promotion factor: 113, 126, 147, 148, 149, 150, 152, 153, 154, 155, 176, 177, 181, 196, 197, 198, 199, and 202 shown in FIG. 1.
The following seven positions (FIG. 7) are the positions, in E. coli Lrp, identified to potentially interact with leucine: 147, 154, 169, 181, 199, 200, and 201 of FIG. 1.
The following seven positions (FIG. 9) are the positions, in pot1216151, identified to potentially interact with leucine: 147, 149, 154, 169, 173, 200, and 202 of FIG. 1.
The following twenty-eight positions (FIG. 12) are the positions, in pot1216151, identified as facing the “gaps”: 116, 119, 120, 126, 144, 145, 147, 148, 149, 150, 152, 153, 154, 166, 169, 173, 177, 181, 183, 185, 193, 195, 196, 197, 198, 199, 200, and 201 of FIG. 1.
4.2. Virtual Screening and Drug Designing
In the present invention, agents can be virtually screened by using the original 3D atomic coordinates determined as above or coordinates derived therefrom.
Upon the virtual screening, the 3D atomic coordinates shown in Table 1 are input to a computer thereby obtaining graphic representation or any type of numerical information. All the coordinates shown in Table 1 or any necessary part may be input, such as the part defining the “hole” or the “gaps”, or the part defining the five α helices and the five β helices. Examples of a program usable for analyzing the 3D structure include those collected in CCP4 package, and program O, X-plor, MolScript, Insight II, and Grasp. Examples of “graphic representation” include any forms to produce visual information such as ribbon diagrams, 3D models, or types of computer graphics. Examples of “numerical information” include any information composed of numbers, such as diameters of crystals and widths and depths of the hole and the gaps.
The information obtained as above is input to a virtual library of chemical compounds in order to search for compounds that are candidates of the pharmaceutical agents. Examples of the virtual library include, but are not limited to, those commercially available. For example, screening software such as DOCK-4 (Kunts), and a 3D structural database such as MDDR (Prous Science) can be used.
The graphic representation or the numerical information described above can be used not only for screening for candidates of pharmaceutical agents but also for modeling or designing of agents using computers. Modeling may be performed using software such as FRODO or O, designed for analyzing crystal structure, and designing may be performed using QUANTA, InsightII, or the like. For, example, a ligand able to fit into the hole or the gap can be designed by using software for molecular designing, such as QUANTA, by consulting with a computer graphics made using the atomic coordinates of the FFRP.
EXAMPLES
Although the present invention will now be described in detail by way of EXAMPLES and REFERENCE EXAMPLES, the present invention is not limited to these examples.
Example 1
Identification of P. aeruginosa FFRPs
All open reading frames (ORFs, each formally codes for 50 or more amino acid residues between the start and stop codons) found in the complete genomic sequence (Stover, C. K. et al., 2000, Nature 406, 959-964) of the standard strain (PAO1) of P. aeruginosa were identified and translated to amino acid sequences. ORFs of P. aeruginosa resembling the FFRPs of E. coli (genomic sequence of E. coli K strain: Blattner, F. R. et al., 1977, Science, 277, 1453-1474), or FFRPs of archaea, Pyrococcus sp. OT3 (JCM 9974) or Thermoplasma volcanium (these FFRPs listed in Suzuki, M et al., 2003, Proc. Japan Acad. 79B, pp. 92-98), were identified using the FASTA program (Peason, W. R., and Lipman, D. L., 1988, Proc. Natl. Acad. Sci. USA, 85, 2444-2448). A low Z score of approximately 180 was used as the threshold so that no FFRP was overlooked.
The amino acid sequences of the candidates of P. aeruginosa FFRPs identified as above and the amino acid sequences of FFRPs of the other bacteria were analyzed using the CLUSTALW program collected in the PHYLIP package (Thompson J. D. et al., 1994, Nucl. Acids Res., 22, 4673-4680), and a multiple alignment was made by correlating residues between different sequences with each other.
Two types of major improvements were made to this alignment. First, in each set of positions identified to be identical as many as possible should be occupied by the single type of amino acid residue (highlighted in bold at positions outside the α helices in FIG. 1). Second, identical regions in different FFRPs should form the same types of secondary structural elements (e.g., an α helix), so that these secondary structural elements formed in the same order will form essentially the same 3D structure. A program such as CLUSTALW is not usable for the latter type of improvement.
Importantly, it has been confirmed that inside the regions predicted to fold into α-helices, hydrophobic residues should be positioned by forming particular phasings: in an α helix, every 3.6 amino acid residues will face the same side, and thus hydrophobic residues arranged with this periodicity will stabilize a protein domain by interacting with other secondary structural elements. Also, amino acid residues that would prevent formation of particular types of second structural elements were best avoided from regions identified to form such elements. Deletion or insertion of amino acid residues was best avoided at the midst of the regions predicted to form secondary structural elements. The alignment was improved so that residues stereochemically atypical, such as proline, glycine, and tryptophan, were best occupying the same positions among the FFRPs.
Consequently, eight FFRPs of P. aeruginosa were identified, and a multiple alignment correlating their amino acid residues to those of FFRPs of other bacteria was finalized (FIG. 1).
Example 2
Identification of the Phylogenetic Relation Between FFRPs
Without changing the correlation between residues in the multiple alignment in FIG. 1 and by using the PHYLIP package, FIG. 2 was made showing similarities between FFRPs. In FIG. 2, two FFRPs related more closely are separated by a shorter distance, this distance being defined as the sum of partial distances measured from the node separating the two FFRPs to the respective FFRPS. For example, the protein related closest to E. coli Lrp is Ps5977610 from P. aeruginosa.
A bootstrap value was calculated for each node in FIG. 2. A bootstrap value is a measure for evaluating degree of homogeneity of data used to deduce a conclusion: a conclusion needs to be unbiased, supported by essentially the whole of the data set. This value defines the number of times the same diversification at a node is concluded out of, for example, 1,000 trials, while effectively changing the weight given to each of the amino acid positions used for the analysis. In extreme cases, some positions might be excluded from the analysis or only several positions might be selected. Phylogenetic relation indicated by a node in a model is more accurate when the bootstrap value approaches 1,000.
Bootstrap values calculated to nodes inside regions including the eight FFRPs of P. aeruginosa (highlighted red or blue in FIG. 2) were generally high, indicating higher reliability of the phylogenetic relations determined between these proteins. In particular, the bootstrap value calculated to the node separating E. coli Lrp and Ps5977610 was higher than 900/1,000, and the orthologous relationship between the two proteins was unambiguous. The closest to Ec0468065 of E. coli was Ps2220251 of P. aeruginosa, but the bootstrap value calculated to the node relating the two was not very high (FIG. 2). No P. aeruginosa FFRP was found resembling E. coli AsnC.
Example 3
Identification of Ligand-Binding Site
By using correlation of amino acid sequences between P. aeruginosa FFRPs and pot1216151 shown in FIG. 1 and by using findings obtained by analyzing the crystal coordinates of the archaeal FFRP, pot1216151 (see REFERENCE EXAMPLES and Patent Application No. 2001-384683), in total thirty-two amino acid positions were identified for each of the FFRPs from bacterial species as potential targets while developing a pharmaceutical agent (FIG. 3). The crystal structure of pot1216151 used for this identification is the only 3D structure of any FFRP determined to date in complex with a ligand. It is the single FFRP structure where the positions of the side chains of amino acid residues are determined precisely. The identification of these positions was carried out by four different approaches described below.
- i) In the crystal of pot1216151, each octamer was found in complex with two molecules of an unidentified assembly promotion factor (i.e., a ligand), this ligand having being absorbed from E. coli cells upon expression of the protein (see REFERENCE EXAMPLES and Patent Application No. 2001-384683). Related by a crystallographic symmetry, the two ligand molecules are binding to identical sites in the pot1216151 assembly (FIG. 4). The size of the ligand was similar to that of a medium amino acid, e.g., valine: a valine molecule was modeled by filling the electron density of each ligand molecule (FIG. 5). Eighteen amino acid residues whose at least one non-hydrogen atom was positioned within 6 Å from the modeled valine, when measured from carbon, oxygen, or nitrogen atoms in the valine (FIG. 6). It has been concluded that in general in FFRPs, the eighteen positions, i.e., 113, 126, 147, 148, 149, 150, 152, 153, 154, 155, 176, 177, 181, 196, 197, 198, 199, and 202, have potentials to interact with ligands, wherein these positions are identified using FIG. 1.
- ii) Molecular genetic experiments using E. coli Lrp have shown that leucine-dependence of transcription regulation by Lrp was affected by mutation at each of seven positions (Platko, J. V., and Calvo, J. M., 1993, J. Bacteriol., 175, 1110-1117). These seven positions, in E. coli Lrp, are candidates which possibly interact with leucine. With the 3D structure of E. coli Lrp being unknown, residues of pot1216151, identified as occupying the equivalent positions (147, 154, 169, 181, 199, 200, and 201 in FIG. 1) were found surrounding the gap formed in the FFRP assembly (FIGS. 7 and 8). Among the seven residues of pot1216151, the side chain of Met (199) only was found facing away from the gap, facing into the protein domain, although its position was close to the gap. Of the remaining six residues, the main chain carboxyl group of Ala (201) and the side chains of Val (147), Asp (154), Leu (169), Arg (181), and Ile (200) were found facing the gap. It was concluded that with these seven positions generally in FFRPs, ligands interact potentially.
- iii) Leucine interacts not only with E. coli Lrp (Marasco, R. et al., 1994, J. Bacteriol., 176, 5197-5201) but also with pot1216151 (REFERENCE EXAMPLES and Patent Application No. 2001-384683), thereby disassembling these FFRPs. Up to two molecules of leucine binds to E. coli Lrp per gap (Marasco, R. et al., 1994, J. Bacteriol., 176, 5197-5201) formed between a pair of dimers. In order to analyze possible stereochemical changes induced upon interaction between leucine and pot1216151, two leucine molecules were modeled using a computer and added to the crystal structure of pot1216151 by fitting into the gaps formed between a pair of dimers. Each leucine molecule was modeled near the seven residues described above. As shown in FIG. 9, the two gaps are related by a pseudo two-fold symmetry, each gap potentially interacting with one molecule of leucine. Here, only one leucine molecule is shown in FIG. 9, by fitting into the lower gap. FIG. 9 is a view of the complex when looked through the direction indicated by the arrow in FIG. 10, showing only the two dimers closest to the arrow. The side chain of the leucine molecule was modeled extending from the vicinity of Val (147) through Leu (169) towards Ile (200), so that hydrophobic interactions will be formed. The amido group of leucine was modeled approaching Asp (154) of pot1216151, while the amido group of leucine approached Val (147), both forming chemical bonds. The overall complementality between the leucine molecule and the gap was found ideal; however the leucine molecule was positioned too close to Tyr (149), Asp (173), and Ile (202) of pot1216151, creating van der Waals conflicts. Thus, this complex will not be stable, but might dynamically change. At the five positions from which interactions were made without a conflict, E. coli Lrp and pot1216151 share the same or similar amino acid residues (FIG. 11). It was thus concluded that ligands potentially bind to the seven positions of FFRPs in general.
- iv) Using the 3D structure of pot1216151, twenty-eight amino acid positions were identified as forming the gaps between dimers. Equivalent positions in FFRPs in general are candidates potentially interacting with ligands. Namely, amino acid residues were identified as forming gaps when they were inaccessible by a probe of the radius 5.0 Å moving by contacting the surface of the assembly, but at least partially accessible by another probe of the radius 1.4 Å, when this accessible area was 5% or larger of the area exposed when the same type of amino acid residue was fully stretched between a pair of glycine residues. In the crystal structure, four gaps were formed unrelated by any crystallographic symmetry, and twenty-eight residues were identified as forming two or more of the four gaps (FIG. 12). These residues are found at 116, 119, 120, 126, 144, 145, 147, 148, 149, 150, 152, 153, 154, 166, 169, 173, 177, 181, 183, 185, 193, 195, 196, 197, 198, 199, 200, and 201 shown where these positions are identified using FIG. 1.
As the sum of identifications i) to iv), thirty-two positions are listed in FIG. 3. These positions are interpretable as forming two ligand-binding sites partially overlapping onto each other (*Typographical error existed here, noted by the translator). Of the positions listed in FIG. 3, when ten positions, 116, 119, 120, 144, 145, 166, 183, 185, 193, and 195, identified only in iv) but not in i)-iii) were removed, twenty-two positions shown in FIG. 13 remained. Of these, the E. coli unidentified assembly promotion factor binds around positions identified in i) only, or in both i) and iv), i.e., twelve positions on the left in FIG. 13. While, the disassembling factor, leucine, binds around four positions on the right in FIG. 13, identified in iv) and one or both of ii) and iii). At around the six positions in between, the two types of ligands might compete with each other for binding.
Example 4
Further Specifying Target P. aeruginosa FFRPs in Order to Prevent Possible Interaction of Pharmaceutical Agents to be Developed with E. coli
E. coli Lrp and P. aeruginosa Ps5977610 have very similar amino acid residues at positions important for interaction with ligands. The two amino acid sequences shown in FIG. 1 are similar to each other as a whole. These facts suggest that the two proteins are regulated in the same way by the same ligands including leucine. None of the P. aeruginosa FFRPs was found to be resembling E. coli AsnC. The protein most resembling E. coli Ec0468065 was Ps2225251, but the similarity between the two was not high. Of the other six P. aeruginosa FFRPs, Ps2914358 and Ps5372266 were found to be differentiated from all the three FFRPs of E. coli.
It has been discussed that, of the three a helices formed inside the N-terminal domain of an FFRP, the third helix is important for recognizing DNA bases, but that three positions of the third helix are unable to recognize DNA, since they are often occupied by hydrophobic residues, facing into the protein domain (Suzuki, M., et al., 2003, Proc. Japan Acad. 79B, 92-98). Based on the multiple alignment shown in FIG. 1, amino acid residues forming the third α helix of each P. aeruginosa FFRP were identified, and twelve positions potentially recognizing DNA bases were identified (FIG. 14). At these positions E. coli Lrp and P. aeruginosa Ps5977610 had very similar amino acid residues, suggesting that both will recognize the same DNA sequence. Ec0468065 and Ps2225251 were found sharing the same residues at four positions out of the twelve positions. Among the FFRPs of P. aeruginosa, Ps2914358 and Ps5372266 have differentiated farthest from the three E. coli FFRPs. No P. aeruginosa FFRP was found sharing three or more residues with E. coli AsnC at the same positions. These findings are consistent with the conclusion obtained by analyzing positions possibly interacting with ligands, and also with those drawn by comparing the whole amino acid sequences.
Reference Example 1
Crystallization of an FFRP
(1) Construction of a Vector for Expressing an FFRP
The following primers were synthesized in order to amplify a DNA fragment coding an FFRP (pot1216151) gene by PCR using the genomic DNA of Pyrococcus sp. OT3 (JCM 9974) as the template. PCR was carried out using the reaction solution, 20 μl, LA Tag (Takara Shuzo Co., Ltd.) and GeneAmp PCR system 9600 (Perkin Elmer): each cycle consisting of denaturation at 94° C., annealing at 55° C., and elongation at 72° C., and repeating this cycle 30 times.
The amplified DNA fragment was cleaved using restriction enzymes NdeI (Takara Shuzo Co., Ltd.) and BamHI (Takara Shuzo Co., Ltd.), and the fragment coding the gene was separated from the rest by electrophoresis using an agarose gel. The DNA fragment coding the FFRP (potl216151) gene was ligated with an expression vector, pET3 (Novagen), cleaved using restriction enzymes, NdeI and BamHI, thereby constructing an expression vector (pET3-LRPS01): 10 μl of the reaction solution, 660 mM Tris-HCl buffer (pH 7.6) containing 66 mM MgCl2, 100 mM DTT, and 1 mM ATP, was kept at 16° C. overnight, in the presence of T4 DNA ligase (Takara Shuzo Co., Ltd.).
Primers:
|
(SEQ ID NO: 32)
Forward Strand:
|
5′-TGGTGATGACATATGGTGACGGCCTTTATCCTG-3′
|
(SEQ ID NO: 33)
Reverse Strand:
|
5′-GAACGGATCCATCAAATTGCTATCATAGTCGAGGTC-3′
(2) Expression of an FFRP using E. coli
The vector designed for expressing the FFRP (pot1216151) gene, pET3-LRPS01, was introduced into E. coli cells strain BL21 (DE3) (Novagen). The E. coli cells were cultured in 8 ml of the 2×YT medium containing 50 mg/ml ampicillin at 37° C. overnight, inoculated into 8 l of the same medium, and allowed to grow until the absorbance of the medium reached approximately 0.75 at 600 nm. Subsequently, 2 mM isopropylthiogalactoside (IPTG) was added to induce expression of the FFRP. After additional culture for 4 hours, cells were collected by centrifugation at 7,500 rpm for 5 minutes using a centrifuge (Beckman Avanti J-25).
(3) Purification of an FFRP (pot1216151)
The cells expressing the FFRP (pot1216151) were suspended into 250 ml of a 100 mM Tris-HCl buffer (pH 7.0) containing 1 mM EDTA, and treated using a French press (SLM). After centrifugation for 30 minutes at 4° C. at 25,000 rpm using a centrifuge (Beckman Avanti J-25) and a rotor (JA-25.5), the supernatant was collected and heated at 75° C. for 1 hour. After another centrifugation at 4° C. at 25,000 rpm for 30 minutes, the supernatant was dialyzed against a 30 mM Tris-HCl buffer (pH 7.0), and subjected to further purification: by twice repeating the following process, i.e., anion exchange column chromatography followed by gel filtration.
The supernatant was applied to an anion exchanger (1.6×18 cm, Resource Q, Pharmacia), in a column, equilibrated with 30 mM Tris-HCl buffer (pH 7.0), and the column was washed with the same buffer. Subsequently, the protein was eluted with a linear gradient, 0-2 M of NaCl in the buffer, with a flow rate of 2 ml/min, using FPLC column (Pharmacia). The solution eluted from the column was fractionated into fractions of 4 ml. By SDS electrophoresis, fractions containing the FFRP were identified and stored.
The stored protein solution was dialyzed against 100 mM Tris-HCl (pH 7.0) and subjected to gel filtration. The protein solution was applied to a gel column (2.6×60 cm, Superdex 75, Pharmacia) equilibrated with a 100 mM Tris-HCl buffer (pH 7.0), and eluted with the same buffer at a flow rate of 1 ml/min using the FPLC system (Pharmacia). The fractions obtained (2 ml each) were subjected to SDS electrophoresis, and those containing the FFRP were identified and stored. The above processes of anion exchange chromatography and gel filtration were alternately carried out two times to purify the FFRP until a single band was observed in an electrophoretogram.
(4) Crystallization of the FFRP (pot1216151)
The purified FFRP, 20 mg/ml, was dissolved in a 10 mM Tris-HCl buffer (pH 7.0) to prepare a sample for crystallization. The sample was crystallized on a 24-well crystallization plate (Hampton Research) by a vapor-diffusion method using a sitting-drop technique. Specifically, using a mixture of 4 μl of the sample and 4 μl of a reservoir solution (100 mM citrate buffer (pH 4.0) containing 10% by weight of PEG 6000 and 1.0 M lithium chloride) as the mother solution, the sample was allowed to be equilibrated with 0.8 ml of the reservoir solution by vapor diffusion at a constant temperature of 5° C. In approximately a week, six-sided pyramid crystals of about 0.2 mm were obtained.
Reference Example 2
Analysis of the 3D Structure of the FFRP
(1) X-Ray Diffraction Analysis
In order to determine the 3D structure by a heavy atom isomorphous replacement method, the FFRP (pot1216151) crystal obtained in REFERENCE EXAMPLE 1 was soaked in a preservative solution containing 10 mM platinocyanide (K2[Pt(CN)6]) or 0.1 mM gold chloride (K[AuCl4]) at 5° C. for about 2 days.
Four sets i.e., two sets of FFRP original crystals and two sets of derivatives respectively derived from two heavy atoms (platinum and gold), were measured using two X-ray source: 1) a laboratory rotating anode X-ray source, and 2) a synchrotron radiation X-ray source.
1) Analysis Using a Laboratory Rotating Anode X-Ray Source
A set of original crystals of the FFRP (pot1216151) and two sets of derivatives from two heavy atoms (platinum and gold) were analyzed at room temperature by using the laboratory rotating anode X-ray source. Each set was placed in a quartz capillary (1.5 mm in diameter, produced by TOHO Co., Ltd.), and an excessive solution was removed. After both ends of the capillary were sealed with wax, the capillary was set in an X-ray diffractometer. The X-ray source (UltraX 18 produced by Rigaku Industrial Corporation) was operated with 50 kV and 100 mA, and diffraction data was recorded with a diffraction device (R-AXIS IV produced by Rigaku Industrial Corporation).
2) Analysis Using A Synchrotron Radiation X-Ray Source
In order to obtain data at a higher resolution, the original FFRP (pot1216151) crystal was measured in a frozen state by using the synchrotron radiation X-ray source. The synchrotron radiation X-ray source used was Hyogo-ken Beam Line BL24XU of photon factory SPring8. The crystal was immersed in a cryopreservation solution [20% (by weight) glycerol, 14% (by weight) PEG 6000, 1.0 M lithium chloride, and a 100 mM citrate buffer (pH 4.0)] for several minutes, mounted on a 0.2-mm mount loop (Cryoloop, produced by Hampton Research Corporation) for cryopreservation, and was frozen in liquid nitrogen (−196° C.). During the analysis, the temperature of the crystal was kept at −173° C. using a device designed to spray cold air to crystals (produced by Rigaku Industrial Co., Ltd.). Diffraction was recorded by a diffractometer (R-AXIS IV produced by Rigaku Industrial Co., Ltd.) using a synchrotron radiation X-ray having a wavelength of 0.834 Å.
(2) Data Analysis
The recorded diffraction was processed using a program designed for the diffractometer and the programs in the CCP4 package (Collaborative Computational Project, Number 4, Acta Crystallographica D50, 760-763, 1994). The space group of the crystals was identified as belonging to a space group P3221 or P3121, and the unit cell lengths were identified: a=b=96.3 Å, and c=97.1 Å. Based on these lengths, it was concluded that each asymmetric unit of these crystals contained three to six molecules of the FFRP.
(3) Building an Initial Model
The diffractions from the FFRP pot1216151 and the two heavy atom (platinum and gold) derivatives were integrated using programs in the CCP4 package, and used for the subsequent computational analysis. Positions of the heavy atoms in the derivatives were determined using difference Patterson maps. The gold and platinum derivatives, respectively, had two and three heavy metal atoms per asymmetric units. Numbers, positions, and occupancies of the heavy atoms were refined using the MLPHARE program in the CCP4 package. The overall figure of merit at this stage was calculated as 0.43 at 3.0 Å.
By using the phase obtained as above and by using the isomorphous replacement method, an electron density map was calculated. By examining the map, the phase was improved by the methods of solvent flattening and histogram matching, using the DM program in the CCP4 package. In the revised electron density map calculated using the improved phase, electron densities corresponding to right-handed α-helices were identified appropriately only when four molecules of the protein were assumed in each asymmetric unit and when these units were related by the space group P3221. A model was made by assembling four monomers (each consisting of 72 alanine residues), so that the model would best fit to the electron density map using program O (Jones T. A., Zou J. Y., Cowan S. W., and Kjeldgaard M., Improved methods for binding protein models in electron density maps and the location of errors in these models, Acta Crystallographica A47, 110-119, 1991).
(4) Refinement of the Model
The initial model was refined using the X-PLORE program (Brünger, A. X-PLORE v3.1 Manual (Yale University, New Haven, 1992)), so that the model would best satisfy both the diffraction data experimentally obtained and the standard geometric parameters (Engh and Huber) that were expected for protein 3D structures in general. The model was further refined using program O to correct the part of the model where large deviations from the electron density map were observed. Until this stage, the four monomers in the asymmetric unit were kept identical to each other. The R factor indicating the difference between the experimental data and the model was 39.1% at this stage.
In order to further refine the model, the high-resolution data obtained at SPring8 BL24XU were used. The aforementioned alanine model was refined using the X-PLORE program using data up to 3.0 Å, and other data up to 2.0 Å were incorporated while improving the phase using the wARP program (Perrakis, A., Sixma, T. K., Wilson, K. S., and Lamzin, V. S., wARP: Improvement and extension of crystallographic phases by weighted averaging multiple refined dummy atomic models, Acta Crystallographica D53, 448-455, 1997). Using the improved phase, a new electron density map was calculated, where electron densities of most of the atoms in the protein, including the atoms of side chains of the amino acid residues, were clearly identified. Based on this electron density map, another 3D structural model was made by including the amino acid side chains of the FFRP (pot1216151).
Further refinements were carried out at a resolution of 1.8 Å, by modeling solvent molecules so that there would match with electron densities that were clearly identified but not interpretable as any atoms in the protein, which will be discussed further in the following paragraph. At the final stage of refinement, the four monomers in the asymmetric unit were allowed to adopt non-identical 3D structures.
(5) Determination of the Final Model
The final model (FIG. 8) was assembled by four independent monomers of the FFRP (pot1216151). Each monomer comprises all the residues except for the first amino acid residue, i.e., methionine, at the N-terminal end. The R factor, evaluating the consistency between the experimental data (20-1.8 Å) and the final model, was calculated as 21.2%, indicating a high accuracy of the 3D model. The PROCHECK program in the CCP4 package was used to calculate a Ramachandran plot. In the plot, 98.5% of all the residues were found in energetically most stable regions. The average temperature factor (B-factor) was as small as 17.3, indicating that all the atoms were determined unambiguously, except for some side chains, which were positioned on the surface, and thus expected as possessing real flexibilities for movements.
Reference Example 3
Analysis of the FFRP by Gel Filtration
It has been reported that many FFRPs derived from microorganisms, including E. coli, form dimers or tetramers in solution. The FFRP expressed in E. coli was analyzed by gel filtration in order to estimate sizes of its assemblies in solution.
Specifically, the FFRP pot1216151 purified for the crystallization was diluted with a 50 mM Tris-HCl buffer (pH 7.0) containing 300 mM sodium chloride, yielding a concentration of approximately 100 μM. Gel filtration was carried out at a flow rate 1 ml/min (LC Module I plus System, Waters) using a matrix (Protein Pak 125, 7.8×300 mm, Waters) and the same buffer. Retention of the protein was recorded by measuring the UV absorption at 220 nm.
A multiple number of peaks were observed (FIG. 16, purification 1). In general upon gel filtration, assemblies of larger sizes will be retained for a shorter time. Accordingly, the first peak (peak 1 in FIG. 16) might correspond to an octamer, and other peaks retained longer should correspond to smaller assemblies. This protein forms a variety of assemblies up to an octamer depending on the condition. The function of the octamer may be different from those of smaller assemblies.
Example 4
Analysis of the 3D Coordinates of Atoms in the FFRP pot1216151
(1) The 3D Coordinates of Atoms in the FFRP
The atomic coordinates of the 3D structure of the FFRP pot1216151 determined are shown using the protein data bank (PDB) format (Table 1), describing the four independent monomers of the protein (A to D) in the asymmetric unit and 196 water molecules. Lines 1 to 7 of Table 1 specify the crystal symmetry to repeat the asymmetric unit, as is generally the case of any crystals. From line 8, eleven parameters (i)-(xi) described from left to right are: (i) serial numbers of the atoms (1 to 2,556); (ii) types of atoms, e.g., C, the carbon, further differentiated as, for example, CA, CB, indicating the positions inside the amino acid residues, also including information concerning chemical bonding; (iii) assignments of the atoms to 20 types of amino acid residues, using the 3 letter code, e.g., VAL for valine and HOH for the atoms belonging not to amino acid residues but to water molecules, and, in addition, their assignments to the four monomers (A to D) or to water molecule (W); (iv) amino acid residue numbers counted from the N terminus in each monomer, or numbers 1 to 196 for the water molecules; (v) the X coordinates in angstrom; (vi) the Y coordinates in angstrom; (vii) the Z coordinates in angstrom; (viii) occupancies (i.e., probabilities of the atoms occupying the given coordinates); (ix) isotropic temperature factors (i.e., measures of the flexibilities of atoms for thermal movements); (x) the atomic numbers defined by the periodic table (e.g., 6 for C, 7 for N, and 8 for 0); and (xi) types of the atoms, the same as in (ii) (e.g., C, O, and N).
The atoms are named according to the IUPAC-IUB nomenclature; however, in (ii), A, B, C, D, E, Z, and H were used (e.g., CA or CB) instead of α, β, γ, δ, ε, ζ, and η. The additional oxygen atoms present at the C termini were labeled as OXT (OT).
(2) Analysis of the 3D Coordinates
1) Formation of Assemblies of the FFRP pot1216151
By analyzing the data shown in Table 1, it was found that each monomer of the FFRP is composed of a four-stranded β sheet and two α-helices (FIG. 15). Each pair of monomers assembled into a dimer, by forming a single β-strand composed of eight strands, i.e., four strands from each monomer (FIG. 15). In the crystal, four such dimers further assembled to form a disk-like octamer (FIG. 3). The diameter of the octamer disk was approximately 60 Å and the thickness thereof was approximately 40 Å.
2) Characteristics of the 3D Structure of the FFRP pot1216151
In the central region of the disk-like octamer of the FFRP pot1216151, there exists a hole, the overall shape resembling a Japanese 50-yen coin. Four gaps, each formed between a pair of dimers, extend from this hole, thereby forming a space having a cross-like shape (FIG. 8). The shape of this space, and types and coordinates of amino acid side chains surrounding this space are the 3D structural information important for screening for ligands interacting with the FFPR.
The hole in the central region resembled a cylinder having a diameter of approximately 12 Å and a height of approximately 30 Å. The hole was large enough to accommodate two amino acid molecules. Eight sets of amino acid side chains respectively from eight FFRPs in the assembly, valine 9, glutamic acid 37, tyrosine 38, methionine 68, and serine 70, face this hole (here numbers, such as 9, 37, or 38, are those of amino acid residues, counted from the N terminus in each FFRP monomer (see Table 1). Also, residues 37, 38, and 68 are positioned on the border between the hole and the gaps.
Each of the four gaps formed between the pairs of the dimers is large enough to accommodate two amino acids, or able to do so by being expanded by the two amino acids. Each gap was surrounded by two sets of side chains of the two dimers, glutamic acid 15, valine 33, tyrosine 35, aspartic acid 39, leucine 49, aspartic acid 53, isoleucine 56, threonine 57, arginine 61, threonines 69 and 71, and isoleucines 73 and 75.
3) Application of the 3D Information to Screening for Ligands
If a ligand binds to the space extending from the hole to the gaps and if the ligand is completely complementary to part of the space and thus able to fit into, the ligand will stabilize the octamer thereby activating the functions of the FFRP as an octamer. However, if the ligand is larger than the space and binds there with a high constant, it will enlarge the space, thereby dissociating the octamer, terminating the functions of the FFRP as an octamer, and activating functions as smaller assemblies. Most likely, this space is where interaction with natural ligands will occur.
As has been described, graphical and/or numerical information of the FFRP obtained from the 3D coordinates shown in Table 1 defines the space extending from the hole to the gaps and specify the positions of atomic groups, hydrophobic or hydrophilic, facing the space. Thus, this information provides a useful platform for screening for ligands interacting with the FFRP.
Reference Example 5
The Position of a Natural Ligand Present in the Crystal of FFRP
(1) The Presence of a Natural Ligand in the Crystal of the FFRP pot1216151
The presence of a natural ligand in the crystal obtained in REFERENCE EXAMPLE 1 was confirmed as described below.
1) Purification of the FFRP (pot1216151) using a Method Different from what was Described in REFERENCE EXAMPLE 1
The protein was purified by a more rigorous method with additional uses of ammonium sulfate fractionation and hydrophobic column chromatography. Ammonium sulfate fractionation was carried out after the heat treatment and centrifugation. Namely, ammonium sulfate was added to the supernatant, yielding 40% saturation. The solution was centrifuged at 4° C. at 18,000 rpm for 15 minutes. Ammonium sulfate was further added to the supernatant, yielding 80% saturation. After the centrifugation at 4° C. at 18,000 rpm for 15 minutes, the sediment was dissolved in 30 ml of a 30 mM Tris-HCl buffer (pH 7.0) and dialyzed against a 30 mM Tris-HCl buffer (pH 7.0). Hydrophobic column chromatography was carried out after the anion exchange column chromatography and the gel filtration described in REFERENCE EXAMPLE 1. Namely, after the gel filtration, ammonium sulfate was added to the protein solution, yielding a concentration of 1.6 M, and applied to a column (1.6×18 cm), containing Butyl-Toyopearl 650 M (Tosoh) pre-equilibrated with 50 mM Tris-HCl buffer (pH 7.0) containing 1.5 M ammonium sulfate. The column was washed with the same buffer. Subsequently, the protein was eluted using a line, 1.5-0 M, gradient of ammonium sulfate in the buffer with a flow rate 2 ml/min: the FPLC column (Pharmacia) was used. Fractions, 4 ml each, were subjected to SDS electrophoresis and those identified as containing the FFRP were stored.
2) Changes Between Assembly Forms
Changes in apparent molecular weight of the FFRP (pot1216151) in the solution, i.e., changes in the assembly form, were confirmed (FIG. 16, purification 2) by electrophoresis. Compared with the method employed in REFERENCE EXAMPLE 1, in this method, the protein is exposed to the environments accelerating, in general, denaturation of proteins. This suggests that the ligand, which has been derived from E. coli and stabilized the assembly of the FFRP, dissociated from the FFRP after the rigorous purification, thereby failing to form an octamer. The analysis thus suggests that a natural ligand that stabilizes the assembly of the FFRP exists in the cells of E. coli and that the crystal obtained in REFERENCE EXAMPLE 1 was in complex with this natural ligand.
(2) The Position of the Natural Ligand in the Crystal of FFRP (pot1216151)
The final model showing the 3D structure of the FFRP (pot1216151) was re-examined to analyze non-protein regions (the regions interpreted to correspond with 196 water molecules) in further detail. Electron densities which likely possibly correspond to two molecules of the ligand were identified at two positions inside the gaps formed between the dimers (FIG. 4).
As has been discussed, what can be determined experimentally by X-ray diffraction analysis is an electron density map, and the 3D coordinates obtained best fitting the map are still a model. While a large number of water molecules are generally contained in crystals, it is extremely difficult to identify molecules as small as water in an electron density map. Of the atoms constituting a water molecule, the two hydrogen atoms diffract X-rays very poorly, and thus, in short, they are invisible by X-ray analysis. Consequently, in order to identity a water molecule, a point-like density of the oxygen atom isolated from any other density needs to be identified in the electron density map. In the present model, densities identified as corresponding to molecules other than FFRP molecules are first assumed as derived from 196 water molecules, i.e., 196 oxygen atoms in particular. If a natural ligand originated in E. coli cells is present in the crystal, one of such electron densities should correspond to that of the natural ligand.
In order to identify the electron density of the ligand, water molecules modeled to relatively low electron densities were removed. Of these, 66 were found inside the hole at the center of the octamer. This was necessary to remove distortion of the map caused by possible misidentification of these atoms. Starting with this model, the process of 3D structure refinement was repeated several times, and the difference between the model and the electron density map (hereafter referred to as the difference Fourier map) was computed, expecting that a density should emerge, corresponding to the ligand. At each cycle, high densities newly found in the difference Fourier map (at counter levels of three or higher) were examined thoroughly. To these densities, which were isolated or which were close enough to hydrophilic groups in the protein so that ionic/hydrogen bonding was possible, new water molecules were modeled. Finally, an electron density larger than that expected for a water molecule, was identified in each asymmetric unit. Since an octamer is composed of two such asymmetric units two such densities were found in the octamer (FIG. 4). These two densities were interpreted as those of two molecules of the ligand, each positioned inside the gap formed between a pair of dimers. Each electron density has a size equivalent with four or more water molecules, or equivalent with a single molecule of a medium sized amino acid such as valine or isoleucine.
Example 6
Interaction Between the FFRP and Natural Ligands in Solution
It has been confirmed that various amino acids and some other biomolecules (e.g., metabolic intermediates) can act as natural ligands on assemblies of the FFRP (pot1216151).
(1) Changes in Crystal Structure by Amino Acids
It has been known that the regularity inside a crystal might be affected, if the structure of the protein changes upon interaction with a ligand which is incorporated from outside the crystal, thereby depolarizing the crystal. Crystals of the FFRP (pot1216151) were soaked into solutions, each containing one of twenty amino acids at the same concentration 10 mM. With isoleucine, valine, methionine, and leucine, the crystals depolarized after several hours. With the other amino acids, no change was observed. It is important to note that the changes caused by the four amino acids to the 3D structure of the protein are not necessarily the same, and that it is possible that the other amino acids, although they showed no effect, had no ability to diffuse into the crystal.
(2) Analysis Using Gel Filtration
Changes in assemblies of the FFRP pot1216151 induced by interaction with amino acids and metabolic intermediates were analyzed in solution using gel filtration.
1) Experimental Procedure
Gel filtration was carried out at a flow rate 1 ml/min, using a matrix (Protein Pak 125, 7.8×300 mm, Waters) and a 50 mM Tris-HCl buffer (pH 7.0) containing 300 mM sodium chloride. Flow of the protein was monitored by measuring the UV absorbance at 220 nm (LC Module I plus system, Waters). The FFRP pot1216151 purified by method 2, i.e., the rigorous method, was dissolved in 50 mM Tris-HCl buffer (pH 7.0) containing 200 mM sodium chloride, and kept at −80° C. until it was diluted by 10-fold with a 50 mM Tris-HCl buffer (pH 7.0) containing 300 mM sodium chloride, and mixed with each potential ligand for at least 30 minutes at room temperature (about 25° C.). In the mixture, the monomer concentration of the FFRP was approximately 100 μM. While, the concentration of each-amino acid was 1 mM and that of 5 metabolic intermediates, i.e., malic acid, 2-oxoglutaric acid, oxaloacetic acid, pyruvic acid, and 3-phosphoglyceric acid, was 10 mM.
2) Results
In the sample containing isoleucine, the second peak increased. In the sample containing valine, the third peak increased (FIG. 17a). In samples containing other six amino acids, i.e., methionine, arginine, leucine, phenylalanine, alanine, and threonine, the fourth peak increased (FIG. 17b). None of the other twelve amino acids showed any significant effect. When one of the three metabolic intermediates, each containing four or more carbon atoms (i.e., malic acid, 2-oxoglutaric acid, and oxaloacetic acid) was mixed, the third peak increased (FIG. 17c). In contrast, no significant effect was observed with two other metabolic intermediates (i.e., pyruvic acid and 3-phosphoglyceric acid), each containing three carbon atoms.
Peaks associated with smaller retention time should correspond to assemblies of larger molecular weights. Thus it is concluded that isoleucine accelerates assembling of the protein, six other amino acids, i.e., methionine, arginine, leucine, phenylalanine, alanine, and threonine, accelerate disassembling of the protein, and valine and three metabolic intermediates (malic acid, 2-oxoglutaric acid, and oxaloacetic acid) have effects of stabilizing intermediate assemblies.
TABLE 1
|
|
3D atomic coordinates of the 3D structure of the FFRP
(pot1216151)
|
|
ORIGX11.0000000.0000000.0000000.00000
ORIGX20.0000001.0000000.0000000.00000
ORIGX30.0000000.0000001.0000000.00000
CRYST196.34596.34597.056 90.0090.00120.00
SCALE10.0103790.0059930.0000000.00000
SCALE20.0000000.0119850.0000000.00000
SCALE30.0000000.0000000.0103030.00000
ATOM1CBVALA2−2.07348.3597.2181.007.256C
ATOM2CG1VALA2−0.81447.5396.8361.008.496C
ATOM3CG2VALA2−3.08048.3416.0881.007.166C
ATOM4CVALA2−1.71847.7009.5951.007.206C
ATOM5OVALA2−1.19148.72510.0101.008.498O
ATOM6NVALA2−4.00548.6698.8321.007.127N
ATOM7CAVALA2−2.75247.8408.4901.007.396C
ATOM8NTHRA3−1.37646.4569.9921.007.517N
ATOM9CATHRA3−0.23646.21910.8631.008.846C
ATOM10CBTHRA3−0.54145.36712.1111.009.166C
ATOM11OG1THRA3−1.62046.01012.8201.009.258O
ATOM12CG2THRA30.61645.20813.1101.008.766C
ATOM13CTHRA30.83645.44910.0731.006.506C
ATOM14OTHRA30.45444.5289.3801.004.228O
ATOM15NALAA42.09845.90710.1321.006.947N
ATOM16CAALAA43.10145.0689.4201.006.586C
ATOM17CBALAA43.28645.6698.0211.006.976C
ATOM18CALAA44.40245.02210.2111.007.806C
ATOM19OALAA44.63545.82811.1241.007.688O
ATOM20NPHEA55.27244.0589.8771.005.617N
ATOM21CAPHEA56.56144.00110.5541.007.246C
ATOM22CBPHEA56.80642.70711.3551.006.596C
ATOM23CGPHEA55.96942.61812.6051.007.486C
ATOM24CD1PHEA54.62842.27112.5331.007.256C
ATOM25CD2PHEA56.51142.99513.8301.008.056C
ATOM26CE1PHEA53.83342.21813.6701.008.846C
ATOM27CE2PHEA55.73442.90714.9831.006.406C
ATOM28CZPHEA54.43042.49314.8771.007.396C
ATOM29CPHEA57.64844.0359.4321.007.626C
ATOM30OPHEA57.55643.3018.4561.004.618O
ATOM31NILEA68.53545.0059.6541.007.297N
ATOM32CAILEA69.62545.2118.7291.007.196C
ATOM33CBILEA69.69246.6928.3141.005.966C
ATOM34CG2ILEA610.72846.8097.1911.005.346C
ATOM35CG1ILEA68.33747.1887.7741.007.136C
ATOM36CD1ILEA68.40448.6867.4321.009.396C
ATOM37CILEA610.95744.7589.3481.006.376C
ATOM38OILEA611.37345.24310.4121.006.228O
ATOM39NLEUA711.56843.7838.7251.007.347N
ATOM40CALEUA712.83243.2049.1371.009.696C
ATOM41CBLEUA712.89741.7018.9271.0012.766C
ATOM42CGLEUA711.78140.8169.4511.0017.256C
ATOM43CD1LEUA712.03839.3259.2581.0018.406C
ATOM44CD2LEUA711.55041.07810.9221.0017.006C
ATOM45CLEUA713.97343.7978.2921.009.336C
ATOM46OLEUA713.71144.0127.1181.007.508O
ATOM47NMETA815.01244.3518.9301.009.257N
ATOM48CAMETA816.01345.0988.2271.0011.966C
ATOM49CBMETA815.95446.5848.6631.0013.866C
ATOM50CGMETA814.61047.2518.4921.0018.886C
ATOM51SDMETA814.49048.8909.1891.0016.9316S
ATOM52CEMETA813.64348.40310.6981.0023.906C
ATOM53CMETA817.45844.6538.5801.0014.576C
ATOM54OMETA817.73044.2499.7071.0012.698O
ATOM55NVALA918.35744.7437.6151.0013.977N
ATOM56CAVALA919.78744.5037.8001.0014.266C
ATOM57CBVALA920.41743.6746.6681.0016.266C
ATOM58CG1VALA921.97243.7386.6971.0016.526C
ATOM59CG2VALA919.99442.2426.7601.0014.676C
ATOM60CVALA920.34645.9027.8071.0015.956C
ATOM61OVALA919.93346.6616.9001.0020.598O
ATOM62NTHRA1021.15246.4248.7121.0015.017N
ATOM63CATHRA1021.66047.7838.6091.0013.756C
ATOM64CBTHRA1021.54048.6759.8591.0013.366C
ATOM65OG1THRA1022.19448.06611.0011.0011.938O
ATOM66CG2THRA1020.07048.91310.2481.0013.196C
ATOM67CTHRA1023.19047.7108.3761.0015.096C
ATOM68OTHRA1023.72846.6508.6481.0015.548O
ATOM69NALAA1123.80948.8278.0391.0016.407N
ATOM70CAALAA1125.30648.7287.9971.0017.236C
ATOM71CBALAA1125.83550.0657.5641.0016.266C
ATOM72CALAA1125.72248.3529.4131.0017.146C
ATOM73OALAA1125.09048.78210.3881.0016.258O
ATOM74NALAA1226.75847.5509.5991.0017.627N
ATOM75CAALAA1227.17047.14010.9521.0017.186C
ATOM76CBALAA1228.38946.22810.7901.0018.076C
ATOM77CALAA1227.43148.31211.8701.0016.006C
ATOM78OALAA1228.13249.26011.5281.0014.878O
ATOM79NGLYA1326.85548.33013.0931.0014.717N
ATOM80CAGLYA1327.17149.43314.0221.0014.326C
ATOM81CGLYA1326.23650.63913.9291.0015.216C
ATOM82OGLYA1326.36051.57514.6901.0015.608O
ATOM83NLYSA1425.28850.63513.0041.0015.717N
ATOM84CALYSA1424.32051.72412.8731.0016.256C
ATOM85CBLYSA1424.20752.10911.3751.0017.806C
ATOM86CGLYSA1425.56652.62210.8451.0021.866C
ATOM87CDLYSA1425.88553.96411.4841.0021.556C
ATOM88CELYSA1427.30054.38511.0901.0024.446C
ATOM89NZLYSA1427.43255.81911.4851.0025.937N
ATOM90CLYSA1422.92051.28813.3021.0014.396C
ATOM91OLYSA1422.01352.11113.2691.0015.688O
ATOM92NGLUA1522.73850.03413.6531.0013.017N
ATOM93CAGLUA1521.39349.57114.0011.0015.996C
ATOM94CBGLUA1521.45248.12714.5211.0017.366C
ATOM95CGGLUA1522.24848.14715.8251.0025.396C
ATOM96CDGLUA1522.80746.80816.2461.0031.236C
ATOM97OE1GLUA1522.13545.92315.6261.0035.298O
ATOM98OE2GLUA1523.72346.69217.1191.0030.708O
ATOM99CGLUA1520.70550.44415.0611.0015.486C
ATOM100OGLUA1519.53050.76114.9441.0012.548O
ATOM101NARGA1621.41550.78016.1431.0016.357N
ATOM102CAARGA1620.78751.55517.2101.0019.566C
ATOM103CBARGA1621.66751.54218.4621.0023.746C
ATOM104CGARGA1621.32652.43619.6161.0029.546C
ATOM105CDARGA1621.72753.91019.4771.0035.886C
ATOM106NEARGA1621.06054.70220.5401.0041.437N
ATOM107CZARGA1621.42754.74121.8191.0043.056C
ATOM108NH1ARGA1622.48854.05222.2531.0045.297N
ATOM109NH2ARGA1620.72055.49222.6561.0044.307N
ATOM110CARGA1620.42452.94716.7521.0018.286C
ATOM111OARGA1619.34653.41217.1431.0016.688O
ATOM112NGLUA1721.31353.63716.0181.0016.797N
ATOM113CAGLUA1720.95654.98015.5631.0015.836C
ATOM114CBGLUA1722.12355.76715.0121.0018.266C
ATOM115CGGLUA1722.87055.07913.8911.0021.976C
ATOM116CDGLUA1722.34555.50112.5381.0025.196C
ATOM117OE1GLUA1721.45356.39312.5211.0026.128O
ATOM118OE2GLUA1722.82254.97011.5121.0027.578O
ATOM119CGLUA1719.81954.88714.5381.0014.376C
ATOM120OGLUA1718.95255.77314.5401.0012.638O
ATOM121NVALA1819.74453.87113.7111.0011.947N
ATOM122CAVALA1818.61853.73812.7991.0012.826C
ATOM123CBVALA1818.80652.62211.7731.0013.646C
ATOM124CG1VALA1817.50352.29011.0141.0010.606C
ATOM125CG2VALA1819.88253.07710.7571.0013.426C
ATOM126CVALA1817.35953.49313.6311.0014.026C
ATOM127OVALA1816.31954.11213.3571.0014.658O
ATOM128NMETA1917.44252.60114.5941.0013.177N
ATOM129CAMETA1916.27152.26715.4251.0013.506C
ATOM130CBMETA1916.68151.27916.5121.0014.156C
ATOM131CGMETA1915.45950.89317.3281.0015.476C
ATOM132SDMETA1915.74549.77318.6101.0016.2816S
ATOM133CEMETA1916.55350.60019.9211.0018.986C
ATOM134CMETA1915.71153.48416.1321.0014.536C
ATOM135OMETA1914.48653.70316.1751.0013.438O
ATOM136NGLUA2016.61154.32016.6491.0014.597N
ATOM137CAGLUA2016.16355.53117.3221.0018.006C
ATOM138CBGLUA2017.30656.28918.0251.0020.386C
ATOM139CGGLUA2017.84455.50619.2201.0023.466C
ATOM140CDGLUA2016.82155.00120.2021.0027.706C
ATOM141OE1GLUA2015.77155.67320.4051.0031.748O
ATOM142OE2GLUA2017.01753.91420.7971.0029.388O
ATOM143CGLUA2015.42056.45216.3731.0017.626C
ATOM144OGLUA2014.38756.98316.7531.0017.098O
ATOM145NLYSA2115.91456.70815.1721.0016.597N
ATOM146CALYSA2115.26057.49514.1641.0015.486C
ATOM147CBLYSA2116.10657.42412.8661.0015.606C
ATOM148CGLYSA2117.13258.54212.7431.0019.356C
ATOM149CDLYSA2118.16658.31911.6681.0020.396C
ATOM150CELYSA2119.43459.16211.9141.0023.186C
ATOM151NZLYSA2120.42958.88310.8131.0021.667N
ATOM152CLYSA2113.87956.88913.8501.0014.966C
ATOM153OLYSA2112.90557.63313.6581.0015.158O
ATOM154NLEUA2213.75955.56613.6821.0010.457N
ATOM155CALEUA2212.46954.96713.3721.0011.336C
ATOM156CBLEUA2212.65153.46313.0951.0011.296C
ATOM157CGLEUA2213.49053.15311.8551.0012.086C
ATOM158CD1LEUA2213.72551.64711.7481.0014.546C
ATOM159CD2LEUA2212.85753.65210.5791.0011.386C
ATOM160CLEUA2211.46055.10914.5141.0011.566C
ATOM161OLEUA2210.27055.36414.2751.0010.868O
ATOM162NLEUA2311.91854.92115.7461.0013.007N
ATOM163CALEUA2311.05455.01416.9171.0016.616C
ATOM164CBLEUA2311.80154.71818.2091.0016.556C
ATOM165CGLEUA2311.85853.26418.6101.0018.396C
ATOM166CD1LEUA2312.92853.05019.6751.0016.326C
ATOM167CD2LEUA2310.50152.80419.1421.0017.706C
ATOM168CLEUA2310.40456.39317.0641.0015.896C
ATOM169OLEUA239.28256.44017.5561.0017.608O
ATOM170NALAA2410.99857.44016.5511.0016.017N
ATOM171CAALAA2410.42258.77316.5321.0018.436C
ATOM172CBALAA2411.53359.77516.2311.0016.566C
ATOM173CALAA249.33058.95115.4811.0018.756C
ATOM174OALAA248.77860.05815.4271.0019.418O
ATOM175NMETA259.18858.03914.5121.0015.427N
ATOM176CAMETA258.18958.20213.4661.0015.126C
ATOM177CBMETA258.57057.40912.2081.0014.616C
ATOM178CGMETA259.78757.98911.5041.0016.536C
ATOM179SDMETA2510.47156.81610.3171.0015.9116S
ATOM180CEMETA2512.11857.57610.1311.0018.166C
ATOM181CMETA256.84557.71513.9921.0015.096C
ATOM182OMETA256.80156.66614.6541.0015.918O
ATOM183NPROA265.75758.44113.7431.0014.867N
ATOM184CDPROA265.75559.70312.9551.0014.196C
ATOM185CAPROA264.45558.08314.2421.0014.296C
ATOM186CBPROA263.50459.24613.7961.0015.816C
ATOM187CGPROA264.26559.97012.7371.0016.256C
ATOM188CPROA263.90056.77313.8101.0013.726C
ATOM189OPROA263.19256.13014.6251.0014.688O
ATOM190NGLUA274.29156.22712.6451.0013.347N
ATOM191CAGLUA273.80654.92312.2351.0013.476C
ATOM192CBGLUA274.09154.62510.7601.0017.166C
ATOM193CGGLUA273.99555.5419.6061.0021.176C
ATOM194CDGLUA274.56056.9559.5861.0023.936C
ATOM195OE1GLUA275.41857.45310.3351.0020.188O
ATOM196OE2GLUA274.07257.6168.6101.0025.998O
ATOM197CGLUA274.44453.76413.0041.0010.606C
ATOM198OGLUA273.95452.64413.0111.007.908O
ATOM199NVALA285.61753.98913.5611.009.987N
ATOM200CAVALA286.39452.94614.2021.008.916C
ATOM201CBVALA287.89653.30614.2151.008.006C
ATOM202CG1VALA288.68352.27715.0291.006.926C
ATOM203CG2VALA288.44253.42012.7911.006.996C
ATOM204CVALA285.87852.72915.6201.0010.156C
ATOM205OVALA285.92553.61816.4281.0010.348O
ATOM206NLYSA295.41151.54315.9331.0010.047N
ATOM207CALYSA294.86551.23817.2251.0012.446C
ATOM208CBLYSA293.64350.30317.1061.0013.576C
ATOM209CGLYSA292.43250.90616.4211.0014.506C
ATOM210CDLYSA292.30252.41016.6101.0015.936C
ATOM211CELYSA291.14252.99415.8321.0020.886C
ATOM212NZLYSA291.22454.49715.6841.0022.587N
ATOM213CLYSA295.89150.55018.1291.0012.916C
ATOM214OLYSA295.76950.75419.3321.0011.558O
ATOM215NGLUA306.81049.74617.5921.0010.537N
ATOM216CAGLUA307.78549.05318.4241.0011.266C
ATOM217CBGLUA307.35047.63318.8311.0013.546C
ATOM218CGGLUA306.07247.45619.5981.0016.716C
ATOM219CDGLUA305.65446.01819.9051.0018.006C
ATOM220OE1GLUA304.40345.81419.9711.0017.658O
ATOM221OE2GLUA306.55445.18320.0771.0015.088O
ATOM222CGLUA309.02548.84417.5221.008.706C
ATOM223OGLUA308.82148.76016.3051.006.208O
ATOM224NALAA3110.19848.72818.1081.008.387N
ATOM225CAALAA3111.41748.52917.2931.005.186C
ATOM226CBALAA3111.89449.86216.7521.007.296C
ATOM227CALAA3112.46247.90218.1631.009.366C
ATOM228OALAA3112.51748.22419.3441.009.208O
ATOM229NTYRA3213.16246.87217.6701.006.497N
ATOM230CATYRA3214.16646.19118.4281.008.446C
ATOM231CBTYRA3213.69844.82718.9381.006.516C
ATOM232CGTYRA3212.63244.88120.0301.007.986C
ATOM233CD1TYRA3212.98144.81821.3711.009.506C
ATOM234CE1TYRA3212.01744.88122.3691.0012.016C
ATOM235CD2TYRA3211.29345.01619.6981.008.486C
ATOM236CE2TYRA3210.32445.07920.6661.009.996C
ATOM237CZTYRA3210.68544.99721.9981.0011.976C
ATOM238OHTYRA329.69845.02422.9511.0012.748O
ATOM239CTYRA3215.39645.80117.5671.008.576C
ATOM240OTYRA3215.21145.30016.4621.007.728O
ATOM241NVALA3316.56845.98518.1581.007.807N
ATOM242CAVALA3317.78545.42417.6051.006.396C
ATOM243CBVALA3319.04846.13718.1501.008.756C
ATOM244CG1VALA3320.27345.35517.6581.008.406C
ATOM245CG2VALA3319.02147.58917.7201.007.336C
ATOM246CVALA3317.81243.93917.8961.005.766C
ATOM247OVALA3317.61543.50919.0541.007.138O
ATOM248NVALA3418.07943.07316.8941.004.787N
ATOM249CAVALA3418.00441.63217.1611.006.416C
ATOM250CBVALA3416.73141.01416.5121.006.606C
ATOM251CG1VALA3415.43041.45417.2141.005.426C
ATOM252CG2VALA3416.58341.38415.0321.006.476C
ATOM253CVALA3419.21940.87316.6221.008.926C
ATOM254OVALA3419.95341.35915.7721.0010.448O
ATOM255NTYRA3519.40539.62116.9801.0010.347N
ATOM256CATYRA3520.42938.73516.4821.0010.986C
ATOM257CBTYRA3520.88437.77417.5431.0011.656C
ATOM258CGTYRA3521.64538.40318.6651.0014.046C
ATOM259CD1TYRA3522.97038.79318.4651.0017.646C
ATOM260CE1TYRA3523.71239.29419.5211.0018.936C
ATOM261CD2TYRA3521.07038.58119.9051.0015.536C
ATOM262CE2TYRA3521.80739.10020.9511.0016.486C
ATOM263CZTYRA3523.12239.43620.7621.0019.056C
ATOM264OHTYRA3523.87039.94421.8121.0020.648O
ATOM265CTYRA3519.81537.88115.3711.0011.756C
ATOM266OTYRA3518.62437.59615.4811.0014.458O
ATOM267NGLYA3620.58537.51414.4151.0012.147N
ATOM268CAGLYA3620.08536.72713.2501.0015.976C
ATOM269CGLYA3620.68937.42912.0361.0016.506C
ATOM270OGLYA3621.41838.44112.1531.0021.328O
ATOM271NGLUA3720.17137.20510.8831.0020.977N
ATOM272CAGLUA3720.47837.7469.5631.0024.006C
ATOM273CBGLUA3719.73036.8698.5211.0028.296C
ATOM274CGGLUA3719.99237.3817.1131.0031.966C
ATOM275CDGLUA3719.03436.8986.0591.0035.656C
ATOM276OE1GLUA3718.26835.9056.2131.0037.448O
ATOM277OE2GLUA3719.11437.5825.0111.0038.028O
ATOM278CGLUA3719.91239.1479.4181.0023.506C
ATOM279OGLUA3720.40940.0338.7171.0024.728O
ATOM280NTYRA3818.81539.38210.1511.0021.317N
ATOM281CATYRA3818.29240.76110.2151.0018.056C
ATOM282CBTYRA3816.75840.73010.2021.0018.366C
ATOM283CGTYRA3816.28540.2218.8561.0021.896C
ATOM284CD1TYRA3816.43841.0267.7361.0023.006C
ATOM285CE1TYRA3815.97140.5906.5141.0025.966C
ATOM286CD2TYRA3815.62439.0028.7501.0024.516C
ATOM287CE2TYRA3815.16038.5657.5201.0026.076C
ATOM288CZTYRA3815.41039.3426.4141.0025.276C
ATOM289OHTYRA3814.95538.9335.1731.0029.398O
ATOM290CTYRA3818.81041.33611.5451.0015.226C
ATOM291OTYRA3818.88340.63512.5461.0016.008O
ATOM292NASPA3918.95542.61311.5991.0014.067N
ATOM293CAASPA3919.56543.41212.6431.0013.196C
ATOM294CBASPA3920.37844.51011.8731.0011.786C
ATOM295CGASPA3921.52743.89111.1301.0013.096C
ATOM296OD1ASPA3921.79542.74711.4151.0012.328O
ATOM297OD2ASPA3922.17344.51810.3021.0016.958O
ATOM298CASPA3918.53244.17813.4471.0010.566C
ATOM299OASPA3918.76344.51314.6181.008.228O
ATOM300NLEUA4017.43444.49612.7351.009.467N
ATOM301CALEUA4016.34445.25013.3551.009.226C
ATOM302CBLEUA4016.24646.68312.8651.0012.496C
ATOM303CGLEUA4017.18047.81413.1761.0014.926C
ATOM304CD1LEUA4016.68049.05512.4611.0015.416C
ATOM305CD2LEUA4017.27448.04914.6721.0017.246C
ATOM306CLEUA4014.96644.70412.8801.008.696C
ATOM307OLEUA4014.82944.33711.7051.006.378O
ATOM308NILEA4114.00144.81813.7781.007.557N
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ATOM642CEMETB84.11829.46814.4371.0017.846C
ATOM643CMETB86.60930.15810.3901.0015.906C
ATOM644OMETB85.83230.9419.8521.0014.928O
ATOM645NVALB96.85728.9379.9141.0016.657N
ATOM646CAVALB96.12628.4438.7301.0016.446C
ATOM647CBVALB97.07227.8687.6741.0017.966C
ATOM648CG1VALB96.36127.0786.5581.0016.896C
ATOM649CG2VALB97.85629.0217.0481.0017.276C
ATOM650CVALB95.25827.3339.2851.0017.366C
ATOM651OVALB95.86826.5129.9921.0018.718O
ATOM652NTHRB103.94727.3069.0861.0016.837N
ATOM653CATHRB103.14926.1999.6091.0016.976C
ATOM654CBTHRB101.86026.67410.3131.0017.726C
ATOM655OG1THRB101.01427.3889.3761.0016.788O
ATOM656CG2THRB102.21927.65911.4221.0015.856C
ATOM657CTHRB102.69025.2898.4601.0018.726C
ATOM658OTHRB102.94125.5607.2791.0019.058O
ATOM659NALAB112.10124.1378.7551.0020.007N
ATOM660CAALAB111.48023.3547.6571.0020.046C
ATOM661CBALAB110.91622.0988.2431.0020.186C
ATOM662CALAB110.38424.2337.0721.0022.646C
ATOM663OALAB11−0.25924.9877.8181.0022.868O
ATOM664NALAB120.18424.2255.7591.0024.517N
ATOM665CAALAB12−0.85625.0965.1581.0024.496C
ATOM666CBALAB12−0.86524.8833.6491.0023.686C
ATOM667CALAB12−2.23324.8865.7701.0022.736C
ATOM668OALAB12−2.58723.8266.2901.0022.758O
ATOM669NGLYB13−2.98325.9985.9431.0023.237N
ATOM670CAGLYB13−4.30725.9626.5571.0020.926C
ATOM671CGLYB13−4.31025.7508.0591.0022.766C
ATOM672OGLYB13−5.35825.4338.6431.0023.118O
ATOM673NLYSB14−3.15825.8258.7501.0020.917N
ATOM674CALYSB14−3.16225.57110.1731.0020.156C
ATOM675CBLYSB14−2.19824.42510.5201.0021.566C
ATOM676CGLYSB14−2.51423.1019.7991.0023.276C
ATOM677CDLYSB14−3.83022.53210.3691.0025.366C
ATOM678CELYSB14−4.05921.1309.7151.0027.626C
ATOM679NZLYSB14−5.32720.57610.2721.0029.047N
ATOM680CLYSB14−2.79026.86510.9031.0018.586C
ATOM681OLYSB14−2.84826.86512.1201.0018.568O
ATOM682NGLUB15−2.50327.91410.1711.0019.787N
ATOM683CAGLUB15−1.97829.15610.7311.0021.266C
ATOM684CBGLUB15−1.99830.2699.6811.0022.716C
ATOM685CGGLUB15−0.90030.3308.6651.0025.316C
ATOM686CDGLUB15−1.20529.4667.4411.0028.766C
ATOM687OE1GLUB15−2.17728.6837.4781.0029.588O
ATOM688OE2GLUB15−0.43029.5196.4441.0029.728O
ATOM689CGLUB15−2.78629.69611.8941.0021.726C
ATOM690OGLUB15−2.30229.93313.0011.0021.008O
ATOM691NARGB16−4.09329.87611.6511.0022.717N
ATOM692CAARGB16−5.02230.36612.6611.0022.836C
ATOM693CBARGB16−6.42230.55212.0731.0026.646C
ATOM694CGARGB16−6.63531.63011.0481.0030.526C
ATOM695CDARGB16−6.55533.04811.6021.0035.346C
ATOM696NEARGB16−6.38433.95910.4751.0039.667N
ATOM697CZARGB16−6.16235.25810.3821.0041.316C
ATOM698NH1ARGB16−6.07036.14411.3641.0042.117N
ATOM699NH2ARGB16−6.05035.6589.1041.0041.957N
ATOM700CARGB16−5.12529.43613.8511.0021.366C
ATOM701OARGB16−5.11129.90415.0011.0021.138O
ATOM702NGLUB17−5.12028.10713.6751.0019.627N
ATOM703CAGLUB17−5.24427.31314.9241.0019.146C
ATOM704CBGLUB17−5.77425.89814.6571.0022.226C
ATOM705CGGLUB17−4.83225.23513.6621.0026.796C
ATOM706CDGLUB17−4.94023.73413.6331.0031.066C
ATOM707OE1GLUB17−6.09423.19813.6541.0033.978O
ATOM708OE2GLUB17−3.79423.22313.5501.0032.928O
ATOM709CGLUB17−3.92227.31215.6721.0016.826C
ATOM710OGLUB17−3.90227.25416.9141.0016.128O
ATOM711NVALB18−2.80127.36014.9491.0016.927N
ATOM712CAVALB18−1.50827.47215.6341.0016.566C
ATOM713CBVALB18−0.31927.39514.6631.0016.856C
ATOM714CG1VALB181.05027.67215.3111.0016.296C
ATOM715CG2VALB18−0.22825.92914.2011.0016.986C
ATOM716CVALB18−1.54828.79116.4161.0014.716C
ATOM717OVALB18−1.15628.84917.5601.0013.818O
ATOM718NMETB19−1.97729.86915.7641.0015.187N
ATOM719CAMETB19−2.02331.15716.4691.0016.646C
ATOM720CBMETB19−2.58732.28115.5981.0017.046C
ATOM721CGMETB19−2.59833.59916.4171.0020.446C
ATOM722SDMETB19−2.92334.98115.2561.0023.3116S
ATOM723CEMETB19−1.29034.64614.5861.0024.646C
ATOM724CMETB19−2.80231.10317.7571.0016.326C
ATOM725OMETB19−2.33631.57118.8031.0013.628O
ATOM726NGLUB20−3.98330.44517.7361.0018.197N
ATOM727CAGLUB20−4.77330.39418.9731.0017.756C
ATOM728CBGLUB20−6.22029.95918.6691.0020.396C
ATOM729CGGLUB20−6.90230.80817.6071.0022.116C
ATOM730CDGLUB20−6.97732.32217.7351.0025.016C
ATOM731OE1GLUB20−7.10132.97118.7861.0022.598O
ATOM732OE2GLUB20−6.86933.01216.6731.0027.618O
ATOM733CGLUB20−4.07029.57120.0271.0017.396C
ATOM734OGLUB20−4.08330.00121.2021.0015.658O
ATOM735NLYSB21−3.40028.44719.6541.0015.607N
ATOM736CALYSB21−2.64727.76720.7011.0014.176C
ATOM737CBLYSB21−1.96826.46520.2391.0017.226C
ATOM738CGLYSB21−3.00925.42219.8061.0020.246C
ATOM739CDLYSB21−2.47924.01919.7211.0020.816C
ATOM740CELYSB21−3.53123.00119.2871.0023.496C
ATOM741NZLYSB21−3.54622.69017.8211.0024.317N
ATOM742CLYSB21−1.55928.70421.2551.0012.696C
ATOM743OLYSB21−1.27728.67322.4501.009.628O
ATOM744NLEUB22−0.81029.38720.3761.0012.077N
ATOM745CALEUB220.28630.23520.9191.0010.016C
ATOM746CBLEUB220.99430.89119.7171.0010.076C
ATOM747CGLEUB221.76529.92918.7721.0011.876C
ATOM748CD1LEUB222.15630.69117.4841.0010.376C
ATOM749CD2LEUB222.96629.36919.4521.009.926C
ATOM750CLEUB22−0.22931.32521.8401.0010.766C
ATOM751OLEUB220.32831.64722.8901.0011.148O
ATOM752NLEUB23−1.35831.96021.5251.009.407N
ATOM753CALEUB23−1.92133.02422.3451.0011.736C
ATOM754CBLEUB23−3.07933.72721.6211.0011.696C
ATOM755CGLEUB23−2.74534.51220.3561.0011.816C
ATOM756CD1LEUB23−4.01634.92219.6161.0011.796C
ATOM757CD2LEUB23−1.93835.79020.6951.0012.266C
ATOM758CLEUB23−2.35732.55323.7271.0013.436C
ATOM759OLEUB23−2.42533.43324.5791.0013.818O
ATOM760NALAB24−2.58031.25223.9781.0014.247N
ATOM761CAALAB24−2.82430.78225.3391.0015.646C
ATOM762CBALAB24−3.50229.40825.3451.0015.756C
ATOM763CALAB24−1.51430.58826.1041.0016.646C
ATOM764OALAB24−1.60030.28927.2901.0017.408O
ATOM765NMETB25−0.34930.68125.4621.0014.707N
ATOM766CAMETB250.90130.51626.2491.0015.456C
ATOM767CBMETB252.00129.98025.3311.0014.216C
ATOM768CGMETB251.57828.73424.5641.0015.726C
ATOM769SDMETB252.87428.25923.3611.0015.0116S
ATOM770CEMETB252.02826.88022.5661.0014.166C
ATOM771CMETB251.26731.83226.8751.0013.996C
ATOM772OMETB251.30032.87226.1971.0013.828O
ATOM773NPROB261.57331.88228.1801.0015.207N
ATOM774CDPROB261.68030.67029.0441.0015.966C
ATOM775CAPROB261.94833.09428.8571.0014.726C
ATOM776CBPROB262.16032.68130.3201.0015.606C
ATOM777CGPROB262.37431.22330.2791.0015.146C
ATOM778CPROB263.25533.74428.3381.0014.076C
ATOM779OPROB263.35034.96028.4381.0013.928O
ATOM780NGLUB274.17033.00227.7471.0011.087N
ATOM781CAGLUB275.39133.60327.1831.0013.206C
ATOM782CBGLUB276.37132.49126.7471.0013.286C
ATOM783CGGLUB276.82231.66627.9441.0016.856C
ATOM784CDGLUB276.03630.39828.2311.0018.726C
ATOM785OE1GLUB274.89030.14927.8191.0018.848O
ATOM786OE2GLUB276.59529.54028.9401.0019.288O
ATOM787CGLUB275.05734.42725.9391.0011.336C
ATOM788OGLUB275.82135.25925.5121.0011.548O
ATOM789NVALB283.99034.10225.2311.0010.977N
ATOM790CAVALB283.63434.76723.9721.0010.376C
ATOM791CBVALB282.69533.89723.1211.0010.116C
ATOM792CG1VALB282.22634.56421.8141.007.996C
ATOM793CG2VALB283.39732.55122.9121.007.506C
ATOM794CVALB282.94836.08324.2541.0011.916C
ATOM795OVALB281.84336.13024.8221.0013.088O
ATOM796NLYSB293.56537.16323.8321.0010.477N
ATOM797CALYSB293.01138.48224.0721.0010.886C
ATOM798CBLYSB294.11039.48724.3791.0011.165C
ATOM799CGLYSB295.04838.92525.4831.0012.656C
ATOM800CDLYSB294.29838.98926.8301.0016.716C
ATOM801CELYSB294.73837.82127.7061.0019.486C
ATOM802NZLYSB294.38838.06229.1361.0023.267N
ATOM803CLYSB292.26438.98622.8591.0011.856C
ATOM804OLYSB291.36939.85623.0351.0011.088O
ATOM805NGLUB302.69538.59021.6511.009.937N
ATOM806CAGLUB301.99839.08620.4591.009.606C
ATOM807CBGLUB302.54640.38419.8991.0013.476C
ATOM808CGGLUB302.57741.62820.7711.0011.996C
ATOM809CDGLUB303.19342.83820.1161.0013.206C
ATOM810OE1GLUB303.57943.76920.8561.0011.608O
ATOM811OE2GLUB303.10742.98918.8861.0013.898O
ATOM812CGLUB302.10437.96719.4371.0011.246C
ATOM813OGLUB303.13737.25519.4671.009.558O
ATOM814NALAB311.07637.81818.6061.009.407N
ATOM815CAALAB311.19836.80317.5431.008.706C
ATOM816CBALAB310.69835.42917.9731.007.996C
ATOM817CALAB310.35737.31416.3901.009.996C
ATOM818OALAB31−0.76137.84116.6091.0010.678O
ATOM819NTYRB320.85437.19215.1601.007.337N
ATOM820CATYRB320.11937.63914.0131.007.986C
ATOM821CBTYRB320.60438.96113.4431.006.686C
ATOM822CGTYRB320.42340.15714.3121.008.266C
ATOM823CD1TYRB32−0.72840.93414.0641.008.396C
ATOM824CE1TYRB32−0.91442.08614.8401.009.146C
ATOM825CD2TYRB321.30440.48915.3441.006.706C
ATOM826CE2TYRB321.08941.62316.1051.007.286C
ATOM827CZTYRB32−0.02042.38715.8491.008.066C
ATOM828OHTYRB32−0.27243.54516.5751.0011.138O
ATOM829CTYRB320.35936.71112.7911.009.266C
ATOM830OTYRB321.45536.21112.5951.007.388O
ATOM831NVALB33−0.77436.44212.1191.007.767N
ATOM832CAVALB33−0.73835.69010.8871.008.256C
ATOM833CBVALB33−2.10335.10310.4851.009.776C
ATOM834CG1VALB33−1.92834.4169.1411.009.206C
ATOM835CG2VALB33−2.58834.12511.5381.0010.446C
ATOM836CVALB33−0.31336.6959.8301.006.926C
ATOM837OVALB33−0.84737.8049.7671.008.478O
ATOM838NVALB340.69836.3439.0201.008.027N
ATOM839CAVALB341.17637.3428.1011.008.866C
ATOM840CBVALB342.56537.9388.4401.008.816C
ATOM841CG1VALB342.49338.8259.6661.008.556C
ATOM842CG2VALB343.56736.7878.6121.008.066C
ATOM843CVALB341.26536.7926.6881.0011.206C
ATOM844OVALB341.42735.6136.4701.0013.528O
ATOM845NTYRB351.32337.7935.8071.0013.077N
ATOM846CATYRB351.66737.4644.4211.0015.596C
ATOM847CBTYRB350.81438.4173.5941.0017.526C
ATOM848CGTYRB351.21738.2092.1561.0021.886C
ATOM849CD1TYRB350.71637.0861.5321.0025.266C
ATOM850CE1TYRB351.05036.8140.2121.0028.206C
ATOM851CD2TYRB352.10239.0341.5211.0024.786C
ATOM852CE2TYRB352.53038.7310.2401.0026.746C
ATOM853CZTYRB351.93837.685−0.3981.0028.566C
ATOM854OHTYRB352.27737.427−1.7091.0033.788O
ATOM855CTYRB353.15237.8244.2071.0016.526C
ATOM856OTYRB353.51738.9324.6571.0018.148O
ATOM857NGLYB363.90437.0253.5111.0015.077N
ATOM858CAGLYB365.29737.4413.2141.0018.366C
ATOM859CGLYB366.14336.1513.2311.0019.056C
ATOM860OGLYB365.55735.0613.0581.0016.658O
ATOM861NGLUB377.43436.2573.6091.0021.017N
ATOM862CAGLUB378.15234.9533.5951.0023.516C
ATOM863CBGLUB379.66335.1773.5041.0028.706C
ATOM864CGGLUB3710.26935.9834.6301.0032.356C
ATOM865CDGLUB3711.79835.9034.6121.0036.246C
ATOM866OE1GLUB3712.43736.6855.3721.0035.758O
ATOM867OE2GLUB3712.31735.0443.8471.0037.658O
ATOM868CGLUB377.84533.9814.7141.0023.076C
ATOM869OGLUB378.25932.8344.5401.0023.028O
ATOM870NTYRB387.23234.3375.8401.0021.407N
ATOM871CATYRB386.87933.3616.8891.0019.676C
ATOM872CBTYRB387.61033.8238.1621.0020.726C
ATOM873CGTYRB389.06433.4148.1461.0023.646C
ATOM874CD1TYRB389.40132.0898.4121.0025.306C
ATOM875CE1TYRB3810.71431.6668.4161.0026.526C
ATOM876CD2TYRB3810.09034.3137.8711.0025.136C
ATOM877CE2TYRB3811.41033.8957.8841.0025.616C
ATOM878CZTYRB3811.71032.5918.1451.0027.236C
ATOM879OHTYRB3813.03532.1498.1521.0029.728O
ATOM880CTYRB385.37633.3297.1491.0017.306C
ATOM881OTYRB384.74434.2386.6031.0016.968O
ATOM882NASPB394.74232.3997.8561.0016.107N
ATOM883CAASPB393.31832.3598.0621.0015.226C
ATOM884CBASPB392.87930.8938.2841.0017.216C
ATOM885CGASPB392.93930.1706.9351.0019.016C
ATOM886OD1ASPB392.73530.7875.8691.0019.178O
ATOM887OD2ASPB393.26328.9767.0281.0020.318O
ATOM888CASPB392.81533.1089.2971.0015.486C
ATOM889OASPB391.72633.6949.2901.0013.658O
ATOM890NLEUB403.59033.06410.3831.0013.357N
ATOM891CALEUB403.26633.71711.6391.0012.106C
ATOM892CBLEUB402.87232.70812.7241.0013.676C
ATOM893CGLEUB401.60131.89312.5521.0017.696C
ATOM894CD1LEUB401.32930.93913.7151.0020.326C
ATOM895CD2LEUB400.39432.82512.4791.0020.296C
ATOM896CLEUB404.47134.47012.2231.0011.176C
ATOM897OLEUB405.64634.11811.9611.0010.758O
ATOM898NILEB414.23735.54312.9431.008.247N
ATOM899CAILEB415.33936.23013.6261.009.666C
ATOM900CBILEB415.71237.58713.1081.0012.116C
ATOM901CG2ILEB414.55738.56313.0161.0015.036C
ATOM902CG1ILEB416.73538.24814.0961.0013.846C
ATOM903CD1ILEB417.69139.10513.3191.0015.846C
ATOM904CILEB414.85136.26915.0741.0010.806C
ATOM905OILEB413.67836.57015.3291.009.878O
ATOM906NVALB425.66635.85316.0191.009.907N
ATOM907CAVALB425.26935.77917.4151.008.616C
ATOM908CBVALB425.23134.26917.7581.0011.636C
ATOM909CG1VALB424.72833.99419.1791.0011.776C
ATOM910CG2VALB424.38933.44616.7761.0011.856C
ATOM911CVALB426.26536.48018.3071.009.856C
ATOM912OVALB427.47636.17318.1431.009.178O
ATOM913NLYSB435.81137.41919.1361.007.787N
ATOM914CALYSB436.74038.08820.0551.007.656C
ATOM915CBLYSB436.28239.51920.3451.009.866C
ATOM916CGLYSB437.30640.25121.2451.0010.716C
ATOM917CDLYSB436.61441.60421.5311.009.746C
ATOM918CELYSB437.58542.47622.3151.0010.476C
ATOM919NZLYSB436.92043.78322.6181.006.817N
ATOM920CLYSB436.69437.34921.3961.009.776C
ATOM921OLYSB435.58537.20021.9791.008.098O
ATOM922NVALB447.84036.89121.8971.008.637N
ATOM923CAVALB447.81836.11823.1431.008.806C
ATOM924CBVALB448.10434.61222.9731.0010.386C
ATOM925CG1VALB447.20833.93621.9221.008.216C
ATOM926CG2VALB449.56334.28122.5971.009.956C
ATOM927CVALB448.78236.74224.1381.009.716C
ATOM928OVALB449.69937.51023.7501.005.898O
ATOM929NGLUB458.47936.52825.4181.0010.097N
ATOM930CAGLUB459.29637.04326.5181.0013.686C
ATOM931CBGLUB458.68938.31527.1371.0014.516C
ATOM932CGGLUB458.79839.55226.2691.0018.316C
ATOM933CDGLUB458.03740.75226.7921.0021.506C
ATOM934OE1GLUB457.96441.73326.0101.0022.578O
ATOM935OE2GLUB457.59040.68027.9671.0020.858O
ATOM936CGLUB459.42435.98527.6221.0015.236C
ATOM937OGLUB458.49135.24327.9411.0012.798O
ATOM938NTHRB4610.61735.77628.1441.0015.497N
ATOM939CATHRB4610.98834.81529.1571.0015.126C
ATOM940CBTHRB4611.68233.53428.6891.0016.316C
ATOM941OG1THRB4612.95933.76328.0101.0015.788O
ATOM942CG2THRB4610.83332.73027.6931.0017.846C
ATOM943CTHRB4611.93035.52230.1421.0017.326C
ATOM944OTHRB4612.52436.58429.8581.0016.708O
ATOM945NASPB4712.01034.95731.3631.0017.977N
ATOM946CAASPB4712.84535.63532.3531.0020.366C
ATOM947CBASPB4712.59835.22333.8131.0025.586C
ATOM948CGASPB4712.66433.73634.0351.0029.816C
ATOM949OD1ASPB4712.44833.01033.0271.0031.628O
ATOM950OD2ASPB4712.95633.25035.1621.0032.248O
ATOM951CASPB4714.30135.37331.9781.0016.726C
ATOM952OASPB4715.11236.30732.0391.0017.658O
ATOM953NTHRB4814.62034.17331.5511.0015.747N
ATOM954CATHRB4816.04333.98731.2131.0016.406C
ATOM955CBTHRB4816.77033.06932.2151.0015.676C
ATOM956OG1THRB4816.28831.73931.9911.0016.498O
ATOM957CG2THRB4816.60533.44433.6911.0017.546C
ATOM958CTHRB4816.23133.40529.8171.0015.746C
ATOM959OTHRB4815.28632.95229.2101.0016.518O
ATOM960NLEUB4917.48833.42429.3311.0014.227N
ATOM961CALEUB4917.82832.80828.0781.0012.996C
ATOM962CBLEUB4919.30933.04727.7311.0013.456C
ATOM963CGLEUB4919.77232.44226.3991.0012.866C
ATOM964CD1LEUB4918.88532.97225.2691.0012.526C
ATOM965CD2LEUB4921.24832.79926.1761.0012.696C
ATOM966CLEUB4917.64131.31428.1381.0014.596C
ATOM967OLEUB4917.10230.68127.2231.0015.538O
ATOM968NLYSB5017.97030.68229.2621.0016.177N
ATOM969CALYSB5017.72029.24629.3811.0019.486C
ATOM970CBLYSB5018.19328.72730.7581.0022.066C
ATOM971CGLYSB5019.65028.76831.0701.0027.906C
ATOM972CDLYSB5020.54227.87230.2261.0030.916C
ATOM973CELYSB5021.60527.20531.1071.0034.166C
ATOM974NZLYSB5022.91527.92431.0801.0035.277N
ATOM975CLYSB5016.21428.92429.3061.0014.906C
ATOM976OLYSB5015.81927.82328.9171.0014.688O
ATOM977NASPB5115.38029.79329.8761.0017.817N
ATOM978CAASPB5113.90829.50729.8141.0017.696C
ATOM979CBASPB5113.21930.48230.7291.0019.516C
ATOM980CGASPB5113.36030.13432.2061.0020.726C
ATOM981OD1ASPB5113.70829.00332.5741.0021.318O
ATOM982OD2ASPB5113.09231.05332.9841.0020.558O
ATOM983CASPB5113.37129.63228.3981.0016.446C
ATOM984OASPB5112.71528.70327.8901.0017.428O
ATOM985NLEUB5213.94130.58227.6331.0015.237N
ATOM986CALEUB5213.64530.69926.2071.0013.826C
ATOM987CBLEUB5214.39631.92025.5871.0014.636C
ATOM988CGLEUB5214.07632.19424.1171.0015.536C
ATOM989CD1LEUB5212.71032.94524.0061.0014.676C
ATOM990CD2LEUB5215.15832.97423.3991.0013.856C
ATOM991CLEUB5214.07929.44925.4761.0014.796C
ATOM992OLEUB5213.36928.87024.6581.0014.978O
ATOM993NASPB5315.30628.96725.7851.0014.387N
ATOM994CAASPB5315.82127.75925.1481.0016.616C
ATOM995CBASPB5317.15827.29425.7581.0016.336C
ATOM996CGASPB5318.32928.18025.4611.0017.826C
ATOM997OD1ASPB5318.33929.04324.5611.0016.778O
ATOM998OD2ASPB5319.34028.16826.2241.0021.968O
ATOM999CASPB5314.80026.62625.2311.0016.886C
ATOM1000OASPB5314.57525.89824.2701.0016.798O
ATOM1001NGLNB5414.35126.35226.4371.0019.657N
ATOM1002CAGLNB5413.40625.26926.7331.0023.286C
ATOM1003CBGLNB5413.24025.18528.2491.0026.466C
ATOM1004CGGLNB5412.27224.20028.8791.0032.946C
ATOM1005CDGLNB5412.33024.43330.3981.0037.856C
ATOM1006OE1GLNB5411.84625.47430.8871.0039.478O
ATOM1007NE2GLNB5412.94523.51531.1601.0038.137N
ATOM1008CGLNB5412.05125.54526.0831.0021.136C
ATOM1009OGLNB5411.49924.63325.4891.0023.108O
ATOM1010NPHEB5511.55826.76926.1351.0020.487N
ATOM1011CAPHEB5510.29027.16425.5141.0017.726C
ATOM1012CBPHEB559.97928.63925.8341.0017.246C
ATOM1013CGPHEB558.71529.08625.1321.0017.596C
ATOM1014CD1PHEB557.47928.56425.5361.0016.746C
ATOM1015CD2PHEB558.75329.98024.0751.0016.086C
ATOM1016CE1PHEB556.31728.94324.8731.0015.536C
ATOM1017CE2PHEB557.59430.39223.4721.0015.866C
ATOM1018CZPHEB556.36929.85223.8531.0016.046C
ATOM1019CPHEB5510.27126.87124.0281.0017.996C
ATOM1020OPHEB559.43426.13123.4711.0014.838O
ATOM1021NILEB5611.36527.31623.3611.0016.177N
ATOM1022CAILEB5611.46227.09221.9321.0017.086C
ATOM1023CBILEB5612.50428.05021.2941.0017.136C
ATOM1024CG2ILEB5612.63927.71019.8331.0017.706C
ATOM1025CG1ILEB5611.99129.47021.4901.0018.126C
ATOM1026CD1ILEB5612.81930.56120.8951.0022.506C
ATOM1027CILEB5611.77625.64521.5851.0017.956C
ATOM1028OILEB5611.12225.10620.6831.0017.478O
ATOM1029NTHRB5712.73224.99022.2391.0018.227N
ATOM1030CATHRB5713.05323.63221.7901.0020.696C
ATOM1031CBTHRB5714.41123.12622.3151.0020.996C
ATOM1032OG1THRB5714.47023.33623.7221.0023.138O
ATOM1033CG2THRB5715.56523.87721.6571.0021.526C
ATOM1034CTHRB5711.98622.61522.1941.0022.226C
ATOM1035OTHRB5711.71221.73021.3851.0021.328O
ATOM1036NGLUB5811.45622.82923.3921.0023.897N
ATOM1037CAGLUB5810.51321.87223.9411.0028.946C
ATOM1038CBGLUB5810.77721.64825.4491.0030.546C
ATOM1039CGGLUB5812.15521.05825.7061.0033.216C
ATOM1040CDGLUB5812.44219.83524.8441.0036.236C
ATOM1041OE1GLUB5811.53718.98924.6081.0036.528O
ATOM1042OE2GLUB5813.59619.74224.3611.0036.208O
ATOM1043CGLUB589.05222.19423.6891.0027.956C
ATOM1044OGLUB588.34721.18723.4961.0030.278O
ATOM1045NLYSB598.59423.43223.6161.0020.947N
ATOM1046CALYSB597.17823.64823.3271.0025.116C
ATOM1047CBLYSB596.57824.69224.2551.0027.026C
ATOM1048CGLYSB596.24424.16125.6391.0030.906C
ATOM1049CDLYSB595.62425.23626.5491.0034.586C
ATOM1050CELYSB595.69924.79828.0201.0034.946C
ATOM1051NZLYSB595.72525.94428.9721.0036.117N
ATOM1052CLYSB596.91124.00421.8571.0023.876C
ATOM1053OLYSB596.42323.14721.1091.0023.368O
ATOM1054NILEB607.54825.05621.3511.0019.857N
ATOM1055CAILEB607.27425.55420.0031.0017.056C
ATOM1056CBILEB608.00726.90519.7651.0015.536C
ATOM1057CG2ILEB607.82527.43518.3631.0013.696C
ATOM1058CG1ILEB607.48127.98620.7361.0016.516C
ATOM1059CD1ILEB605.99128.25120.4761.0015.986C
ATOM1060CILEB607.60924.56318.9171.0017.346C
ATOM1061OILEB606.77224.16218.1301.0014.528O
ATOM1062NARGB618.87524.10318.8901.0018.707N
ATOM1063CAARGB619.37123.21217.8521.0020.526C
ATOM1064CBARGB6110.92023.30117.8021.0020.896C
ATOM1065CGARGB6111.30624.66217.2161.0021.376C
ATOM1066CDARGB6112.78824.91117.0481.0021.936C
ATOM1067NEARGB6113.41124.02816.0801.0021.237N
ATOM1068CZARGB6113.51124.02414.7761.0018.336C
ATOM1069NH1ARGB6112.96824.99214.0811.0018.187N
ATOM1070NH2ARGB6114.21023.05114.1971.0022.377N
ATOM1071CARGB618.84921.78917.8771.0020.486C
ATOM1072OARGB618.87221.13916.8231.0019.468O
ATOM1073NLYSB628.18921.39718.9481.0019.897N
ATOM1074CALYSB627.48620.12619.0101.0022.126C
ATOM1075CBLYSB627.56419.51020.4151.0022.876C
ATOM1076CGLYSB628.99819.48020.9081.0025.056C
ATOM1077CDLYSB629.84218.46720.1321.0026.736C
ATOM1078CELYSB6211.16418.26720.8791.0028.676C
ATOM1079NZLYSB6211.86517.05220.3761.0029.887N
ATOM1080CLYSB626.01820.26618.6531.0022.896C
ATOM1081OLYSB625.37119.22118.7381.0024.688O
ATOM1082NMETB635.49321.45518.3461.0022.057N
ATOM1083CAMETB634.08521.53517.9351.0021.246C
ATOM1084CBMETB633.59622.98617.7701.0021.676C
ATOM1085CGMETB633.51523.69719.1081.0024.246C
ATOM1086SDMETB632.95825.40319.1051.0025.8616S
ATOM1087CEMETB631.26625.33018.5461.0022.546C
ATOM1088CMETB633.99420.87716.5781.0020.216C
ATOM1089OMETB634.67921.36515.6931.0019.218O
ATOM1090NPROB643.01320.02016.3281.0020.667N
ATOM1091CDPROB642.17119.42317.4001.0021.166C
ATOM1092CAPROB643.00919.22515.1131.0020.716C
ATOM1093CBPROB641.91418.18515.3571.0022.376C
ATOM1094CGPROB641.64518.13716.8241.0020.696C
ATOM1095CPROB642.81720.01113.8401.0020.176C
ATOM1096OPROB643.34419.66812.7651.0019.178O
ATOM1097NGLUB652.07721.11313.9281.0018.927N
ATOM1098CAGLUB651.80821.92512.7501.0020.826C
ATOM1099CBGLUB650.45122.62512.9621.0023.066C
ATOM1100CGGLUB65−0.57021.73213.6491.0024.656C
ATOM1101CDGLUB65−0.70122.03715.1351.0028.896C
ATOM1102OE1GLUB650.28121.99915.9471.0026.578O
ATOM1103OE2GLUB65−1.90022.33815.4951.0030.498O
ATOM1104CGLUB652.86622.96512.4461.0020.766C
ATOM1105OGLUB652.82223.52411.3451.0023.348O
ATOM1106NILEB663.88023.13013.2921.0019.857N
ATOM1107CAILEB664.98824.06612.9911.0018.236C
ATOM1108CBILEB665.57424.58014.3241.0018.276C
ATOM1109CG2ILEB666.95125.20214.1451.0018.206C
ATOM1110CG1ILEB664.50225.52814.8881.0018.676C
ATOM1111CD1ILEB664.91126.36016.0921.0019.786C
ATOM1112CILEB666.02323.33112.1551.0019.566C
ATOM1113OILEB666.49322.27512.6161.0018.628O
ATOM1114NGLNB676.37323.82110.9571.0018.637N
ATOM1115CAGLNB677.29623.10610.1171.0019.986C
ATOM1116CBGLNB676.90123.2718.6251.0021.886C
ATOM1117CGGLNB675.49622.7628.4211.0026.026C
ATOM1118CDGLNB675.04222.4597.0261.0028.556C
ATOM1119OE1GLNB674.36121.4346.8581.0031.698O
ATOM1120NE2GLNB675.28423.3066.0341.0029.807N
ATOM1121CGLNB678.70623.68110.2431.0021.326C
ATOM1122OGLNB679.71523.0999.8431.0020.338O
ATOM1123NMETB688.74924.96610.5831.0021.167N
ATOM1124CAMETB6810.00925.69310.6501.0020.946C
ATOM1125CBMETB6810.29526.2859.2621.0024.016C
ATOM1126CGMETB6810.90225.3948.2371.0030.456C
ATOM1127SDMETB6811.85326.2817.0201.0038.8716S
ATOM1128CEMETB6810.60226.7125.8221.0035.816C
ATOM1129CMETB689.91126.89911.5581.0017.786C
ATOM1130OMETB688.87027.57611.5561.0016.208O
ATOM1131NTHRB6910.97727.26812.2351.0015.587N
ATOM1132CATHRB6911.01728.50613.0251.0012.386C
ATOM1133CBTHRB6910.79328.27814.5271.0013.976C
ATOM1134OG1THRB6911.85327.49715.1161.0014.078O
ATOM1135CG2THRB699.45827.59614.8221.0011.506C
ATOM1136CTHRB6912.36029.17112.7901.0014.556C
ATOM1137OTHRB6913.36428.45712.5871.0013.008O
ATOM1138NSERB7012.43130.48412.9261.0011.767N
ATOM1139CASERB7013.65331.25412.8161.0011.236C
ATOM1140CBSERB7013.77031.80211.4031.0010.946C
ATOM1141OGSERB7014.80732.76311.3951.0013.408O
ATOM1142CSERB7013.46732.32713.9091.0013.086C
ATOM1143OSERB7012.49333.08613.7941.0011.118O
ATOM1144NTHRB7114.23432.22515.0011.009.497N
ATOM1145CATHRB7114.00433.08116.1521.009.276C
ATOM1146CBTHRB7114.02332.16617.4061.0011.056C
ATOM1147OG1THRB7112.96431.21217.3471.0010.778O
ATOM1148CG2THRB7113.88033.01818.6641.0012.376C
ATOM1149CTHRB7115.04734.18816.2821.008.226C
ATOM1150OTHRB7116.24933.93116.1191.0010.118O
ATOM1151NMETB7214.63535.40516.4491.006.697N
ATOM1152CAMETB7215.51736.54716.5851.007.806C
ATOM1153CBMETB7215.11137.66215.6271.0010.556C
ATOM1154CGMETB7215.25137.18314.1651.0016.676C
ATOM1155SDMETB7214.47838.38613.0481.0020.0416S
ATOM1156CEMETB7214.81937.45511.5451.0023.196C
ATOM1157CMETB7215.46737.07918.0051.007.776C
ATOM1158OMETB7214.44237.68818.3491.007.188O
ATOM1159NILEB7316.55936.86718.7441.006.417N
ATOM1160CAILEB7316.58037.34720.1171.008.846C
ATOM1161CBILEB7317.65636.57520.9261.007.956C
ATOM1162CG2ILEB7317.87837.27322.3011.009.416C
ATOM1163CG1ILEB7317.21735.10221.0171.008.056C
ATOM1164CD1ILEB7318.28434.10321.4671.0011.036C
ATOM1165CILEB7316.77438.84220.0971.0011.086C
ATOM1166OILEB7317.66339.30719.3571.0012.778O
ATOM1167NALAB7416.11239.63320.9551.0011.747N
ATOM1168CAALAB7416.34941.04921.0121.0011.916C
ATOM1169CBALAB7415.19041.96821.4811.0011.666C
ATOM1170CALAB7417.56041.35721.9041.0014.516C
ATOM1171OALAB7417.79440.71422.9421.0011.208O
ATOM1172NILEB7518.10942.51921.6301.0017.537N
ATOM1173CAILEB7519.30543.07122.2621.0024.226C
ATOM1174CBILEB7520.07143.93821.2341.0025.526C
ATOM1175CG2ILEB7520.75245.18121.7631.0027.566C
ATOM1176CG1ILEB7521.10643.07820.4891.0025.826C
ATOM1177CD1ILEB7522.21042.62821.4021.0028.796C
ATOM1178CILEB7518.91343.90223.4701.0027.456C
ATOM1179OILEB7517.77944.40523.4691.0029.378O
ATOM1180OTILEB7519.76244.02824.3951.0031.788O
ATOM1181CBVALC239.33219.4434.1711.0013.516C
ATOM1182CG1VALC238.14520.3553.8251.0013.696C
ATOM1183CG2VALC240.29519.3572.9681.0011.616C
ATOM1184CVALC239.16320.2336.5621.0013.746C
ATOM1185OVALC238.66819.2807.2021.0013.058O
ATOM1186NVALC241.19918.9985.7111.0013.507N
ATOM1187CAVALC240.10219.9705.3801.0013.126C
ATOM1188NTHRC339.03121.4866.9421.0013.227N
ATOM1189CATHRC338.16821.9008.0391.0014.116C
ATOM1190CBTHRC338.83322.7989.0841.0012.146C
ATOM1191OG1THRC339.93122.1939.7441.0012.538O
ATOM1192CG2THRC337.82923.09410.2461.0010.766C
ATOM1193CTHRC336.96022.6467.4261.0013.616C
ATOM1194OTHRC337.20223.4896.5631.0012.668O
ATOM1195NALAC435.74622.3257.8361.0011.417N
ATOM1196CAALAC434.58622.9767.2851.0011.206C
ATOM1197CBALAC433.97922.2236.1071.008.896C
ATOM1198CALAC433.47723.1368.3451.0011.126C
ATOM1199OALAC433.34722.3229.2661.0010.908O
ATOM1200NPHEC532.69324.2148.1851.009.677N
ATOM1201CAPHEC531.55024.4539.0361.009.216C
ATOM1202CBPHEC531.42225.8609.6331.009.506C
ATOM1203CGPHEC532.39726.10010.7521.0010.216C
ATOM1204CD1PHEC533.70226.49910.4281.008.386C
ATOM1205CD2PHEC532.07625.90012.0801.009.766C
ATOM1206CE1PHEC534.66526.66311.3921.0010.446C
ATOM1207CE2PHEC533.05126.08613.0501.008.186C
ATOM1208CZPHEC534.31826.44612.7271.009.996C
ATOM1209CPHEC530.31224.1058.1961.0011.446C
ATOM1210OPHEC530.12824.5887.0601.0013.448O
ATOM1211NILEC629.45823.2438.7391.009.237N
ATOM1212CAILEC628.22722.9777.9801.0010.676C
ATOM1213CBILEC628.07521.4537.7931.0012.196C
ATOM1214CG2ILEC626.74421.1897.1181.0011.246C
ATOM1215CG1ILEC629.26820.8377.0201.0012.666C
ATOM1216CD1ILEC629.03719.3186.9491.0012.746C
ATOM1217CILEC627.05523.5718.7391.009.956C
ATOM1218OILEC626.93223.2459.9221.007.948O
ATOM1219NLEUC726.27524.4438.1291.0010.467N
ATOM1220CALEUC725.12325.0548.7681.0011.526C
ATOM1221CBLEUC724.96326.5228.3061.0014.756C
ATOM1222CGLEUC726.16327.3638.7641.0016.866C
ATOM1223CD1LEUC725.97128.8078.3101.0019.736C
ATOM1224CD2LEUC726.30127.27610.2621.0017.566C
ATOM1225CLEUC723.88724.3248.2621.0013.746C
ATOM1226OLEUC723.86424.2317.0241.0015.758O
ATOM1227NMETC822.96723.8619.0731.0012.287N
ATOM1228CAMETC821.87123.0508.6191.0015.306C
ATOM1229CBMETC822.06421.6139.1161.0016.926C
ATOM1230CGMETC823.27520.8098.6661.0018.766C
ATOM1231SDMETC823.60019.3149.5821.0020.8316S
ATOM1232CEMETC824.79119.92110.7761.0024.286C
ATOM1233CMETC820.51023.4929.1871.0017.656C
ATOM1234OMETC820.40923.92610.3461.0016.918O
ATOM1235NVALC919.49623.2408.3621.0019.147N
ATOM1236CAVALC918.08323.3748.7611.0019.286C
ATOM1237CBVALC917.16823.9677.7181.0019.186C
ATOM1238CG1VALC915.69723.9058.1701.0019.226C
ATOM1239CG2VALC917.57925.4187.5401.0019.166C
ATOM1240CVALC917.59821.9669.0601.0019.886C
ATOM1241OVALC918.10621.0358.4141.0023.288O
ATOM1242NTHRC1016.89021.71710.1551.0019.307N
ATOM1243CATHRC1016.41120.36410.3931.0017.926C
ATOM1244CBTHRC1016.84319.66111.6721.0016.386C
ATOM1245OG1THRC1016.13320.31512.7411.0018.118O
ATOM1246CG2THRC1018.34019.78311.8791.0018.626C
ATOM1247CTHRC1014.87320.41110.4781.0019.306C
ATOM1248OTHRC1014.32121.48710.5411.0018.208O
ATOM1249NALAC1114.22219.24410.4301.0019.877N
ATOM1250CAALAC1112.72919.37910.5571.0021.466C
ATOM1251CBALAC1112.17717.98410.4501.0020.406C
ATOM1252CALAC1112.55420.02411.9471.0022.536C
ATOM1253OALAC1113.38719.73712.8281.0020.288O
ATOM1254NALAC1211.57020.89312.1721.0022.837N
ATOM1255CAALAC1211.38821.48513.4911.0021.676C
ATOM1256CBALAC1210.05022.22613.5111.0021.826C
ATOM1257CALAC1211.27920.38614.5461.0022.136C
ATOM1258OALAC1210.43119.49414.3871.0021.928O
ATOM1259NGLYC1312.05920.44115.6341.0021.757N
ATOM1260CAGLYC1311.86719.45616.7081.0020.466C
ATOM1261CGLYC1312.82418.29116.6881.0020.356C
ATOM1262OGLYC1312.99417.49817.6141.0021.828O
ATOM1263NLYSC1413.50818.07315.5811.0021.217N
ATOM1264CALYSC1414.49617.03215.4061.0020.286C
ATOM1265CBLYSC1414.31216.43513.9991.0022.026C
ATOM1266CGLYSC1412.87715.92913.7521.0023.946C
ATOM1267CDLYSC1412.49514.81714.7111.0024.036C
ATOM1268CELYSC1411.14214.23314.2521.0027.626C
ATOM1269NZLYSC1410.81513.03315.0901.0029.367N
ATOM1270CLYSC1415.93117.54415.5611.0020.246C
ATOM1271OLYSC1416.81016.66515.6031.0020.058O
ATOM1272NGLUC1516.20118.85315.7111.0017.967N
ATOM1273CAGLUC1517.60019.25815.8421.0017.396C
ATOM1274CBGLUC1517.72320.77116.0401.0018.156C
ATOM1275CGGLUC1516.92921.37817.1551.0021.056C
ATOM1276CDGLUC1515.44621.69116.8771.0023.066C
ATOM1277OE1GLUC1514.90222.45817.7201.0022.278O
ATOM1278OE2GLUC1514.81121.23715.8991.0019.498O
ATOM1279CGLUC1518.43918.54116.8751.0017.986C
ATOM1280OGLUC1519.63318.25116.6121.0017.018O
ATOM1281NARGC1617.95118.26218.0841.0019.937N
ATOM1282CAARGC1618.75817.60219.0951.0023.346C
ATOM1283CBARGC1618.14217.63820.4851.0026.496C
ATOM1284CGARGC1618.57718.83621.3131.0032.576C
ATOM1285CDARGC1617.73918.91122.5881.0036.196C
ATOM1286NEARGC1617.64620.31323.0271.0040.597N
ATOM1287CZARGC1616.89420.69824.0641.0043.156C
ATOM1288NH1ARGC1616.21819.82024.8131.0045.027N
ATOM1289NH2ARGC1616.88221.99224.3441.0043.417N
ATOM1290CARGC1619.12116.15518.7491.0023.416C
ATOM1291OARGC1620.24415.71319.0201.0024.508O
ATOM1292NGLUC1718.19615.37818.1981.0022.547N
ATOM1293CAGLUC1718.53413.99417.8781.0022.996C
ATOM1294CBGLUC1717.26713.16717.8431.0023.426C
ATOM1295CGGLUC1716.24713.46916.7651.0026.376C
ATOM1296CDGLUC1716.70512.79315.4781.0029.846C
ATOM1297OE1GLUC1717.54011.85615.6511.0030.858O
ATOM1298OE2GLUC1716.26413.21314.4031.0030.828O
ATOM1299CGLUC1719.39213.98316.6171.0021.916C
ATOM1300OGLUC1720.20113.06616.4061.0023.158O
ATOM1301NVALC1819.22214.93115.6861.0020.557N
ATOM1302CAVALC1820.14214.92914.5461.0018.686C
ATOM1303CBVALC1819.76316.00213.5241.0018.866C
ATOM1304CG1VALC1820.91616.28012.5561.0017.786C
ATOM1305CG2VALC1818.53415.56712.7511.0017.956C
ATOM1306CVALC1821.52915.20015.1041.0018.896C
ATOM1307OVALC1822.53214.52314.8681.0020.528O
ATOM1308NMETC1921.63716.18115.9931.0018.997N
ATOM1309CAMETC1922.92516.54116.5591.0019.726C
ATOM1310CBMETC1922.76917.74817.4791.0019.346C
ATOM1311CGMETC1924.11218.13418.1231.0019.036C
ATOM1312SDMETC1923.90519.55219.1721.0019.9716S
ATOM1313CEMETC1922.98218.85920.5191.0021.116C
ATOM1314CMETC1923.60615.41217.3191.0020.766C
ATOM1315OMETC1924.84115.40717.4081.0020.128O
ATOM1316NGLUC2022.85614.57018.0091.0021.727N
ATOM1317CAGLUC2023.50013.49318.8051.0022.576C
ATOM1318CBGLUC2022.49212.94619.8231.0023.976C
ATOM1319CGGLUC2022.24213.98420.9411.0026.936C
ATOM1320CDGLUC2023.50614.38821.6871.0028.956C
ATOM1321OE1GLUC2024.33813.47121.9271.0029.908O
ATOM1322OE2GLUC2023.74215.58922.0411.0029.958O
ATOM1323CGLUC2024.05512.46117.8401.0021.956C
ATOM1324OGLUC2025.10711.81618.0431.0023.268O
ATOM1325NLYSC2123.31712.25116.7491.0019.497N
ATOM1326CALYSC2123.82611.33715.7391.0019.776C
ATOM1327CBLYSC2122.81311.18614.5941.0019.766C
ATOM1328CGLYSC2121.64010.32515.0931.0021.206C
ATOM1329CDLYSC2120.67910.14913.9331.0022.366C
ATOM1330CELYSC2119.3859.48214.4431.0024.726C
ATOM1331NZLYSC2118.3969.48513.3301.0025.527N
ATOM1332CLYSC2125.11711.88215.1551.0020.896C
ATOM1333OLYSC2126.02011.10214.8161.0022.018O
ATOM1334NLEUC2225.16813.19614.8481.0020.087N
ATOM1335CALEUC2226.34913.82814.2651.0017.686C
ATOM1336CBLEUC2226.02615.28213.8091.0017.136C
ATOM1337CGLEUC2225.15715.44012.5821.0017.156C
ATOM1338CD1LEUC2224.52816.85112.5151.0019.166C
ATOM1339CD2LEUC2225.86415.26211.2721.0018.596C
ATOM1340CLEUC2227.49713.77715.2401.0018.536C
ATOM1341OLEUC2228.66013.45614.9251.0018.178O
ATOM1342NLEUC2327.27014.06416.5281.0019.427N
ATOM1343CALEUC2328.36913.96217.4811.0019.766C
ATOM1344CBLEUC2327.92814.38618.8701.0019.186C
ATOM1345CGLEUC2327.61915.87218.9701.0019.726C
ATOM1346CD1LEUC2326.73316.08820.2011.0019.306C
ATOM1347CD2LEUC2328.94016.62719.0571.0020.296C
ATOM1348CLEUC2328.92112.54717.5961.0020.326C
ATOM1349OLEUC2329.99612.40318.2171.0024.128O
ATOM1350NALAC2428.28811.49817.0911.0021.267N
ATOM1351CAALAC2428.94510.18717.2541.0023.376C
ATOM1352CBALAC2427.9139.10517.4551.0022.086C
ATOM1353CALAC2429.9099.98516.0961.0023.916C
ATOM1354OALAC2430.7949.13516.1811.0026.648O
ATOM1355NMETC2529.83110.76315.0181.0022.857N
ATOM1356CAMETC2530.71910.54513.8621.0019.776C
ATOM1357CBMETC2530.06611.12012.6151.0020.266C
ATOM1358CGMETC2528.61010.69712.4161.0018.666C
ATOM1359SDMETC2527.85311.63211.0491.0020.0916S
ATOM1360CEMETC2526.18610.95911.0671.0018.766C
ATOM1361CMETC2532.08411.12414.1261.0020.666C
ATOM1362OMETC2532.19112.21514.6491.0020.748O
ATOM1363NPROC2633.16110.39613.7871.0019.827N
ATOM1364CDPROC2633.0989.04413.1681.0020.836C
ATOM1365CAPROC2634.49810.81614.0241.0019.766C
ATOM1366CBPROC2635.3769.63013.5881.0019.776C
ATOM1367CGPROC2634.5158.77912.7381.0020.306C
ATOM1368CPROC2634.87312.10913.3151.0017.686C
ATOM1369OPROC2635.71312.83813.8521.0017.438O
ATOM1370NGLUC2734.28712.42312.1761.0017.437N
ATOM1371CAGLUC2734.61013.63511.4181.0016.366C
ATOM1372CBGLUC2733.96413.66610.0451.0018.016C
ATOM1373CGGLUC2733.99412.5739.0401.0021.066C
ATOM1374CDGLUC2733.46011.2099.4391.0024.486C
ATOM1375OE1GLUC2732.90510.97510.5441.0022.138O
ATOM1376OE2GLUC2733.61210.3288.5481.0026.958O
ATOM1377CGLUC2734.07214.89412.1321.0015.776C
ATOM1378OGLUC2734.60816.01812.0011.0013.078O
ATOM1379NVALC2832.98514.69312.8891.0014.397N
ATOM1380CAVALC2832.38515.83313.5821.0014.236C
ATOM1381CBVALC2830.91115.62113.9461.0013.366C
ATOM1382CG1VALC2830.34716.90514.6071.0013.526C
ATOM1383CG2VALC2830.08915.30012.7181.0011.936C
ATOM1384CVALC2833.22416.25914.7661.0014.336C
ATOM1385OVALC2833.34715.47615.7221.0015.298O
ATOM1386NLYSC2933.69417.50414.8061.0013.377N
ATOM1387CALYSC2934.43817.95415.9881.0013.986C
ATOM1388CBLYSC2935.62518.88415.6621.0013.926C
ATOM1389CGLYSC2936.53418.18914.6301.0016.476C
ATOM1390CDLYSC2936.87516.76115.0381.0016.966C
ATOM1391CELYSC2938.22116.37414.3981.0022.046C
ATOM1392NZLYSC2938.26214.91114.0301.0024.307N
ATOM1393CLYSC2933.64018.71317.0331.0014.446C
ATOM1394OLYSC2934.01818.68018.2021.0012.538O
ATOM1395NGLUC3032.58319.41916.5751.0013.947N
ATOM1396CAGLUC3031.76620.15617.5511.0013.466C
ATOM1397CBGLUC3032.43521.38918.1531.0014.916C
ATOM1398CGGLUC3032.86822.37617.1211.0017.596C
ATOM1399CDGLUC3033.30823.75517.4921.0018.486C
ATOM1400OE1GLUC3033.81824.43916.5551.0019.498O
ATOM1401OE2GLUC3033.09324.29618.5871.0018.988O
ATOM1402CGLUC3030.42320.37816.8531.0012.446C
ATOM1403OGLUC3030.30320.28515.6291.0010.968O
ATOM1404NALAC3129.36620.50517.6261.0011.167N
ATOM1405CAALAC3128.02120.59917.0481.0010.936C
ATOM1406CBALAC3127.42819.20116.8221.0010.636C
ATOM1407CALAC3127.19021.31518.1131.0010.976C
ATOM1408OALAC3127.36021.05419.3161.009.388O
ATOM1409NTYRC3226.39122.27517.6491.009.537N
ATOM1410CATYRC3225.53023.02518.5521.008.676C
ATOM1411CBTYRC3226.08624.39518.8911.009.256C
ATOM1412CGTYRC3227.40824.48119.6151.0010.086C
ATOM1413CD1TYRC3227.35724.67120.9881.0011.886C
ATOM1414CE1TYRC3228.50324.74021.7941.0012.286C
ATOM1415CD2TYRC3228.64624.32418.9921.0010.956C
ATOM1416CE2TYRC3229.79924.40319.7641.0011.496C
ATOM1417CZTYRC3229.70924.62321.1211.0012.946C
ATOM1418OHTYRC3230.82724.77721.9211.0015.268O
ATOM1419CTYRC3224.20423.30517.8431.0010.596C
ATOM1420OTYRC3224.12123.44416.6031.0010.558O
ATOM1421NVALC3323.16223.33618.6611.009.727N
ATOM1422CAVALC3321.85123.73618.1611.009.116C
ATOM1423CBVALC3320.68323.16118.9681.009.446C
ATOM1424CG1VALC3319.37923.78718.5051.0011.056C
ATOM1425CG2VALC3320.64621.63918.7421.009.656C
ATOM1426CVALC3321.84525.25918.3521.008.786C
ATOM1427OVALC3322.34925.73919.3681.0011.198O
ATOM1428NVALC3421.47826.01217.3421.008.877N
ATOM1429CAVALC3421.54327.47217.3591.007.426C
ATOM1430CBVALC3422.67427.89616.4091.007.826C
ATOM1431CG1VALC3424.06527.32916.8491.006.176C
ATOM1432CG2VALC3422.46627.45714.9331.005.876C
ATOM1433CVALC3420.22528.14016.9541.009.546C
ATOM1434OVALC3419.39527.58016.2231.008.278O
ATOM1435NTYRC3520.02729.39217.3831.0010.137N
ATOM1436CATYRC3518.97630.28416.9471.0011.956C
ATOM1437CBTYRC3518.77531.48317.8761.0012.686C
ATOM1438CGTYRC3518.18531.03919.1951.0017.526C
ATOM1439CD1TYRC3516.81631.01519.3601.0018.776C
ATOM1440CE1TYRC3516.27130.63120.5641.0018.306C
ATOM1441CD2TYRC3518.99430.66220.2621.0017.666C
ATOM1442CE2TYRC3518.44430.26621.4601.0018.186C
ATOM1443CZTYRC3517.06730.26121.6011.0018.436C
ATOM1444OHTYRC3516.49329.86822.7891.0018.938O
ATOM1445CTYRC3519.30030.95515.6041.0012.916C
ATOM1446OTYRC3520.48231.21815.3191.0012.848O
ATOM1447NGLYC3618.29931.19614.7821.0014.247N
ATOM1448CAGLYC3618.52031.85913.4781.0012.606C
ATOM1449CGLYC3617.86431.05612.3891.0014.266C
ATOM1450OGLYC3617.10630.07912.6491.0018.808O
ATOM1451NGLUC3718.19431.29911.1451.0018.177N
ATOM1452CAGLUC3717.63330.56410.0021.0023.096C
ATOM1453CBGLUC3718.16931.2038.7141.0027.516C
ATOM1454CGGLUC3717.65030.5957.4071.0032.046C
ATOM1455CDGLUC3718.54631.0616.2561.0035.486C
ATOM1456OE1GLUC3719.32330.2575.6861.0037.558O
ATOM1457OE2GLUC3718.52132.2545.9091.0036.518O
ATOM1458CGLUC3718.06629.10410.0011.0023.636C
ATOM1459OGLUC3717.32228.1989.6181.0023.988O
ATOM1460NTYRC3819.31628.84710.4031.0021.567N
ATOM1461CATYRC3819.83627.50910.5741.0019.526C
ATOM1462CBTYRC3821.36827.54310.4411.0022.396C
ATOM1463CGTYRC3821.70328.0269.0391.0024.376C
ATOM1464CD1TYRC3821.29227.2587.9691.0025.066C
ATOM1465CE1TYRC3821.58427.6906.6931.0028.436C
ATOM1466CD2TYRC3822.40429.2098.8611.0025.046C
ATOM1467CE2TYRC3822.72629.5997.5721.0027.796C
ATOM1468CZTYRC3822.29228.8436.5011.0027.616C
ATOM1469OHTHRC3822.59629.2435.2301.0031.148O
ATOM1470CTHRC3819.56827.04012.0101.0017.336C
ATOM1471OTHRC3819.30827.80812.9151.0018.038O
ATOM1472NASPC3919.47925.75212.1641.0015.507N
ATOM1473CAASPC3919.06925.12213.4031.0016.046C
ATOM1474CBASPC3918.09224.00613.0201.0014.436C
ATOM1475CGASPC3916.84024.56612.4071.0016.606C
ATOM1476OD1ASPC3916.45325.68712.7521.0015.988O
ATOM1477OD2ASPC3916.25023.86411.5581.0020.278O
ATOM1478CASPC3920.28224.49514.0861.0013.536C
ATOM1479OASPC3920.32624.34415.3071.0014.948O
ATOM1480NLEUC4021.23224.15413.1941.0012.617N
ATOM1481CALEUC4022.43923.48913.6891.0013.536C
ATOM1482CBLEUC4022.19022.02213.2851.0015.556C
ATOM1483CGLEUC4022.71020.83114.0011.0019.186C
ATOM1484CD1LEUC4022.45720.87915.5031.0019.656C
ATOM1485CD2LEUC4021.94219.55713.5141.0018.156C
ATOM1486CLEUC4023.71623.92812.9951.0011.966C
ATOM1487OLEUC4023.74924.15711.7691.0010.548O
ATOM1488NILEC4124.78523.93213.7841.0011.747N
ATOM1489CAILEC4126.12324.20513.1831.0011.846C
ATOM1490CBILEC4126.67925.58813.4821.0012.756C
ATOM1491CG2ILEC4126.69925.79014.9711.0013.886C
ATOM1492CG1ILEC4128.12025.68112.8751.0013.006C
ATOM1493CD1ILEC4128.52727.13412.7441.0014.556C
ATOM1494CILEC4127.07223.11813.6641.0010.856C
ATOM1495OILEC4127.07622.74214.8461.0010.678O
ATOM1496NVALC4227.80122.55312.6991.0010.117N
ATOM1497CAVALC4228.73821.45412.9641.0011.256C
ATOM1498CBVALC4228.08720.22812.2321.0014.866C
ATOM1499CG1VALC4228.98519.11811.8421.0013.656C
ATOM1500CG2VALC4226.99819.62813.1691.0015.566C
ATOM1501CVALC4230.08421.75912.3621.0011.056C
ATOM1502OVALC4230.16822.41211.3001.0011.428O
ATOM1503NLYSC4331.16421.52513.0841.0011.177N
ATOM1504CALYSC4332.51021.65512.5601.0010.836C
ATOM1505CBLYSC4333.42322.36113.5421.0010.746C
ATOM1506CGLYSC4334.83422.63212.9961.0012.246C
ATOM1507CDLYSC4335.62622.99214.2681.0015.846C
ATOM1508CELYSC4337.10123.23014.1231.0015.746C
ATOM1509NZLYSC4337.56223.82615.4561.0014.567N
ATOM1510CLYSC4333.05120.25112.2411.0011.806C
ATOM1511OLYSC4333.13519.34513.0831.0010.838O
ATOM1512NVALC4433.45320.04210.9891.0011.367N
ATOM1513CAVALC4433.93418.77710.4531.0011.946C
ATOM1514CBVALC4432.97518.3069.3411.0013.116C
ATOM1515CG1VALC4433.43017.0098.6571.0016.196C
ATOM1516CG2VALC4431.58317.9789.9001.0013.886C
ATOM1517CVALC4435.38718.93410.0041.0013.356C
ATOM1518OVALC4435.89920.0159.5981.0013.288O
ATOM1519NGLUC4536.20717.90610.1911.0014.077N
ATOM1520CAGLUC4537.62217.8319.8081.0014.766C
ATOM1521CBGLUC4538.68018.06310.8781.0016.306C
ATOM1522CGGLUC4538.63119.44711.5111.0019.966C
ATOM1523CDGLUC4539.52819.67012.6981.0022.486C
ATOM1524OE1GLUC4539.54120.84313.1731.0025.628O
ATOM1525OE2GLUC4540.20418.73213.1681.0022.118O
ATOM1526CGLUC4537.84016.4589.1611.0016.366C
ATOM1527OGLUC4537.10615.5099.5401.0015.718O
ATOM1528NTHRC4638.21516.5267.8571.0016.747N
ATOM1529CATHRC4638.34815.3497.0201.0016.326C
ATOM1530CBTHRC4637.33815.0945.9161.0017.336C
ATOM1531CG1THRC4637.48016.0904.8751.0017.348O
ATOM1532CG2THRC4635.88715.1146.3791.0018.836C
ATOM1533CTHRC4639.74215.4136.3911.0016.886C
ATOM1534OTHRC4640.44616.4256.5021.0016.938O
ATOM1535NASPC4740.29014.2316.0231.0019.877N
ATOM1536CAASPC4741.70014.3175.5761.0021.736C
ATOM1537CBASPC4742.42612.9545.5861.0026.376C
ATOM1538CGASPC4741.71612.0204.6301.0029.726C
ATOM1539OD1ASPC4740.59112.3934.2291.0031.098O
ATOM1540OD2ASPC4742.17110.9324.2131.0033.958O
ATOM1541CASPC4741.73814.9924.1941.0019.556C
ATOM1542OASPC4742.63415.8144.0391.0020.558O
ATOM1543NTHRC4840.76814.7973.3131.0017.367N
ATOM1544CATHRC4840.77715.3641.9721.0016.806C
ATOM1545CBTHRC4840.99814.2790.8891.0017.666C
ATOM1546OG1THRC4839.84313.4180.8411.0019.768O
ATOM1547CG2THRC4842.22613.3991.0661.0018.466C
ATOM1548CTHRC4839.39015.9621.6451.0017.806C
ATOM1549OTHRC4838.41015.7672.3711.0017.968O
ATOM1550NLEUC4939.27616.6930.5391.0017.387N
ATOM1551CALEUC4938.04117.3130.1041.0017.646C
ATOM1552CBLEUC4938.37318.361−0.9821.0018.406C
ATOM1553CGLEUC4937.08119.124−1.3861.0019.666C
ATOM1554CD1LEUC4936.58719.885−0.1531.0018.616C
ATOM1555CD2LEUC4937.33120.095−2.5231.0020.556C
ATOM1556CLEUC4937.07316.254−0.4151.0019.386C
ATOM1557OLEUC4935.85416.268−0.2271.0017.378O
ATOM1558NLYSC5037.66715.245−1.0851.0019.627N
ATOM1559CALYSC5036.91414.069−1.5161.0022.176C
ATOM1560CBLYSC5037.78213.055−2.2511.0025.376C
ATOM1561CGLYSC5037.24511.638−2.4161.0029.736C
ATOM1562CDLYSC5038.41010.633−2.4351.0032.696C
ATOM1563CELYSC5038.0209.201−2.7691.0034.006C
ATOM1564NZLYSC5038.2058.880−4.2301.0036.407N
ATOM1565CLYSC5036.28613.404−0.2801.0019.706C
ATOM1566OLYSC5035.09713.147−0.3111.0018.548O
ATOM1567NASPC5137.02813.1950.8101.0020.247N
ATOM1568CAASPC5136.39212.6642.0311.0019.476C
ATOM1569CBASPC5137.47512.3833.0871.0020.846C
ATOM1570CGASPC5138.32711.1942.6011.0022.116C
ATOM1571OD1ASPC5137.80110.4261.7791.0022.728O
ATOM1572OD2ASPC5139.47811.0663.0251.0020.728O
ATOM1573CASPC5135.32013.5732.5801.0019.166C
ATOM1574OASPC5134.29213.0683.0191.0021.048O
ATOM1575NLEUC5235.44814.9122.4791.0018.947N
ATOM1576CALEUC5234.38115.7992.9451.0015.626C
ATOM1577CBLEUC5234.81317.2712.7921.0015.176C
ATOM1578CGLEUC5233.76018.3543.0781.0012.836C
ATOM1579CD1LEUC5233.23818.1944.5071.0014.016C
ATOM1580CD2LEUC5234.45319.7132.8831.0013.456C
ATOM1581CLEUC5233.13215.6062.1421.0016.816C
ATOM1582OLEUC5232.02615.5032.6441.0016.798O
ATOM1583NASPC5333.29615.6520.8111.0020.547N
ATOM1584CAASPC5332.15615.528−0.1001.0023.666C
ATOM1585CBASPC5332.60015.643−1.5581.0024.366C
ATOM1586CGASPC5331.43315.675−2.5271.0027.186C
ATOM1587OD1ASPC5330.84714.603−2.8311.0028.048O
ATOM1588OD2ASPC5331.04816.750−3.0641.0028.278O
ATOM1589CASPC5331.46514.1980.1831.0024.546C
ATOM1590OASPC5330.23714.1710.2661.0027.348O
ATOM1591NGLNC5432.21213.1260.4801.0025.417N
ATOM1592CAGLNC5431.52811.8560.7041.0027.726C
ATOM1593CBGLNC5432.54010.7260.5431.0029.956C
ATOM1594CGGLNC5431.7719.4210.2291.0035.886C
ATOM1595CDGLNC5432.7768.2600.2341.0038.596C
ATOM1596OE1GLNC5433.9978.5350.2081.0040.188O
ATOM1597NE2GLNC5432.2227.0570.2581.0038.687N
ATOM1598CGLNC5430.86111.7582.0731.0026.836C
ATOM1599OGLNC5429.91010.9732.2441.0027.408O
ATOM1600NPHEC5531.35012.5653.0191.0023.707N
ATOM1601CAPHEC5530.71012.6204.3481.0021.866C
ATOM1602CBPHEC5531.70213.1935.3571.0019.936C
ATOM1603CGPHEC5530.98713.6096.6141.0020.886C
ATOM1604CD1PHEC5530.88412.7427.6831.0019.066C
ATOM1605CD2PHEC5530.39414.8736.6901.0019.806C
ATOM1606CE1PHEC5530.20913.1158.8231.0017.496C
ATOM1607CE2PHEC5529.71515.2497.8301.0020.566C
ATOM1608CZPHEC5529.64314.3528.8951.0019.056C
ATOM1609CPHEC5529.38713.3394.2351.0021.616C
ATOM1610OPHEC5528.35312.9004.7661.0022.208O
ATOM1611NILEC5629.35214.4293.4541.0021.997N
ATOM1612CAILEC5628.09215.1343.2201.0022.476C
ATOM1613CBILEC5628.32816.3862.3371.0022.356C
ATOM1614CG2ILEC5627.03916.9041.7091.0021.096C
ATOM1615CG1ILEC5629.00417.4873.1711.0021.326C
ATOM1616CD1ILEC5629.60118.5432.2641.0024.856C
ATOM1617CILEC5627.04414.2802.5231.0024.706C
ATOM1618OILEC5625.85114.3932.8391.0026.858O
ATOM1619NTHRC5727.40313.5771.4461.0026.487N
ATOM1620CATHRC5726.40712.8470.6671.0027.166C
ATOM1621CBTHRC5727.00712.425−0.6871.0027.376C
ATOM1622OG1THRC5728.23611.757−0.3261.0030.538O
ATOM1623CG2THRC5727.36713.571−1.6161.0025.936C
ATOM1624CTHRC5725.97711.5801.3831.0029.796C
ATOM1625OTHRC5724.79211.1811.3731.0032.618O
ATOM1626NGLUC5826.95110.8841.9651.0030.007N
ATOM1627CAGLUC5826.5919.6272.6221.0031.506C
ATOM1628CBGLUC5827.8268.7472.7741.0033.536C
ATOM1629CGGLUC5828.5128.5401.4281.0036.716C
ATOM1630CDGLUC5827.6488.4450.1821.0039.496C
ATOM1631OE1GLUC5826.5567.8130.1971.0039.868O
ATOM1632OE2GLUC5828.0748.990−0.8851.0040.228O
ATOM1633CGLUC5825.8489.9213.9111.0031.886C
ATOM1634OGLUC5824.7139.4324.0671.0032.248O
ATOM1635NLYSC5926.47610.7544.7541.0031.307N
ATOM1636CALYSC5925.83311.0126.0461.0029.926C
ATOM1637CBLYSC5926.89611.1407.1601.0030.176C
ATOM1638CGLYSC5928.10210.2566.9781.0031.156C
ATOM1639CDLYSC5928.4329.4408.2321.0034.646C
ATOM1640CELYSC5929.9229.0728.2621.0035.286C
ATOM1641NZLYSC5930.3758.4879.5621.0035.487N
ATOM1642CLYSC5924.91412.2036.0561.0028.846C
ATOM1643OLYSC5923.89112.0756.7571.0032.658O
ATOM1644NILEC6025.10513.3375.4011.0027.087N
ATOM1645CAILEC6024.20514.4615.5981.0024.046C
ATOM1646CBILEC6024.91715.8245.4911.0022.386C
ATOM1647CG2ILEC6023.98017.0285.5131.0022.266C
ATOM1648CG1ILEC6025.94515.9876.6141.0022.826C
ATOM1649CD1ILEC6025.47915.8008.0431.0022.996C
ATOM1650CILEC6022.98214.4204.7171.0026.786C
ATOM1651OILEC6021.88514.8765.1261.0027.548O
ATOM1652NARGC6123.09713.8743.5181.0027.907N
ATOM1653CAARGC6121.92213.8222.6391.0028.636C
ATOM1654CBARGC6122.33714.1151.1941.0028.996C
ATOM1655CGARGC6122.19315.5710.7761.0029.416C
ATOM1656CDARGC6123.14915.907−0.3621.0030.776C
ATOM1657NEARGC6123.05817.293−0.8391.0030.007N
ATOM1658CZARGC6123.82317.717−1.8611.0031.736C
ATOM1659NH1ARGC6124.65016.865−2.5191.0030.907N
ATOM1660NH2ARGC6123.74718.977−2.3341.0031.157N
ATOM1661CARGC6121.14412.5252.7851.0029.566C
ATOM1662OARGC6120.05412.4882.1951.0032.698O
ATOM1663NLYSC6221.50711.5193.5651.0028.817N
ATOM1664CALYSC6220.70310.3543.8501.0028.736C
ATOM1665CBLYSC6221.4959.0383.8761.0029.416C
ATOM1666CGLYSC6221.7138.4692.4721.0030.206C
ATOM1667CDLYSC6222.8527.4342.4301.0032.216C
ATOM1668CELYSC6223.3567.3660.9741.0032.816C
ATOM1669NZLYSC6224.5106.4290.8431.0033.647N
ATOM1670CLYSC6220.03810.5155.2301.0030.026C
ATOM1671OLYSC6219.6519.5275.8851.0032.128O
ATOM1672NMETC6320.17711.7135.8231.0028.767N
ATOM1673CAMETC6319.49311.9807.0981.0026.816C
ATOM1674CBMETC6320.43512.7378.0341.0027.756C
ATOM1675CGMETC6320.68811.9009.2551.0028.926C
ATOM1676SDMETC6321.34212.75110.7131.0034.4716S
ATOM1677CEMETC6323.07912.59410.2941.0029.006C
ATOM1678CMETC6318.23112.7186.7381.0025.176C
ATOM1679OMETC6318.22013.8646.2711.0027.778O
ATOM1680NPROC6417.09712.0066.7661.0023.967N
ATOM1681CDPROC6416.98610.6197.2891.0024.176C
ATOM1682CAPROC6415.80812.5386.3551.0024.056C
ATOM1683CBPROC6414.87811.3456.3571.0024.266C
ATOM1684CGPROC6415.49110.3807.3101.0024.026C
ATOM1685CPROC6415.35113.6937.2381.0023.266C
ATOM1686OPROC6414.63414.5996.7861.0023.488O
ATOM1687NGLUC6515.89413.7738.4581.0023.827N
ATOM1688CAGLUC6515.50314.9469.2871.0025.386C
ATOM1689CBGLUC6515.73714.52910.7421.0026.466C
ATOM1690CGGLUC6514.86113.32811.0461.0029.886C
ATOM1691CDGLUC6515.58112.40311.9961.0033.436C
ATOM1692OE1GLUC6514.90511.60712.7071.0036.068O
ATOM1693OE2GLUC6516.82612.49512.1681.0034.588O
ATOM1694CGLUC6516.22416.2288.9331.0025.096C
ATOM1695OGLUC6515.71617.3209.2571.0025.898O
ATOM1696NILEC6617.36916.0988.2331.0023.797N
ATOM1697CAILEC6618.15617.2567.8141.0022.746C
ATOM1698CBILEC6619.63516.8577.6701.0022.136C
ATOM1699CG2ILEC6620.46817.9847.0861.0022.336C
ATOM1700CG1ILEC6620.16516.4129.0121.0020.586C
ATOM1701CD1ILEC6621.61115.9959.0671.0023.306C
ATOM1702CILEC6617.57817.7296.5111.0024.006C
ATOM1703OILEC6617.30116.8545.6651.0026.968O
ATOM1704NGLNC6717.36119.0076.2831.0025.257N
ATOM1705CAGLNC6716.59319.4885.1541.0025.626C
ATOM1706CBGLNC6715.37120.2515.7501.0027.646C
ATOM1707CGGLNC6714.31419.2136.1971.0030.986C
ATOM1708CDGLNC6713.08219.8956.7381.0032.316C
ATOM1709OE1GLNC6712.93421.1136.5141.0035.418O
ATOM1710NE2GLNC6712.26419.1457.4711.0033.337N
ATOM1711CGLNC6717.27620.4344.2001.0028.286C
ATOM1712OGLNC6716.88020.4893.0031.0030.748O
ATOM1713NMETC6818.15621.3104.6581.0027.477N
ATOM1714CAMETC6818.86222.2633.8021.0024.686C
ATOM1715CBMETC6818.00823.5153.7001.0026.706C
ATOM1716CGMETC6818.69724.7453.1181.0031.256C
ATOM1717SDMETC6817.81526.2773.5841.0038.5116S
ATOM1718CEMETC6819.21227.4043.7571.0035.346C
ATOM1719CMETC6820.18922.6454.4771.0023.756C
ATOM1720OMETC6820.09923.0635.6441.0019.668O
ATOM1721NTHRC6921.31322.4113.7891.0021.367N
ATOM1722CATHRC6922.61822.6394.3571.0019.816C
ATOM1723CBTHRC6923.40421.3154.5251.0020.436C
ATOM1724OG1THRC6924.16721.0193.3621.0022.618O
ATOM1725CG2THRC6922.50620.1314.8341.0017.736C
ATOM1726CTHRC6923.49023.6373.6181.0018.756C
ATOM1727OTHRC6923.44023.8192.4091.0020.198O
ATOM1728NSERC7024.29524.3914.3591.0016.807N
ATOM1729CASERC7025.25825.2833.7401.0017.936C
ATOM1730CBSERC7024.71326.6873.9271.0017.556C
ATOM1731OGSERC7025.65027.5783.3481.0022.268O
ATOM1732CSERC7026.65724.9994.3021.0017.096C
ATOM1733OSERC7026.84725.0505.5201.0017.018O
ATOM1734NTHRC7127.60024.6673.4231.0014.947N
ATOM1735CATHRC7128.95924.3283.8891.0015.346C
ATOM1736CBTHRC7129.49123.0363.2001.0015.886C
ATOM1737OG1THRC7128.57621.9803.5391.0015.968O
ATOM1738CG2THRC7130.85622.5733.6551.0016.016C
ATOM1739CTHRC7129.90625.4723.5881.0014.076C
ATOM1740OTHRC7129.90826.0052.4671.0013.138O
ATOM1741NMETC7230.73325.7864.5761.0012.047N
ATOM1742CAMETC7231.80626.7524.4381.0012.026C
ATOM1743CBMETC7231.61227.9635.3511.0011.606C
ATOM1744CGMETC7230.24928.6385.1531.0017.546C
ATOM1745SDMETC7229.86229.7426.5171.0018.7416S
ATOM1746CEMETC7228.29230.3986.0281.0021.266C
ATOM1747CMETC7233.16826.1434.8231.0011.236C
ATOM1748OMETC7233.47125.9026.0151.008.348O
ATOM1749NILEC7333.99625.9613.8131.0010.737N
ATOM1750CAILEC7335.33125.4044.0561.0010.846C
ATOM1751CBILEC7335.95324.9952.7231.0013.416C
ATOM1752CG2ILEC7337.44324.6492.8851.0012.036C
ATOM1753CG1ILEC7335.10523.8532.1571.0014.146C
ATOM1754CD1ILEC7335.75823.1790.9541.0016.096C
ATOM1755CILEC7336.20326.4564.7251.0013.626C
ATOM1756OILEC7336.21627.6334.3591.0013.198O
ATOM1757NALAC7436.93426.0335.7351.0014.747N
ATOM1758CAALAC7437.89626.8936.3981.0018.256C
ATOM1759CBALAC7437.99326.4857.8581.0018.166C
ATOM1760CALAC7439.22626.9395.6691.0022.376C
ATOM1761OALAC7439.59826.0574.8671.0024.328O
ATOM1762NILEC7539.77028.1405.5331.0024.137N
ATOM1763CAILEC7541.07228.4464.9961.0026.436C
ATOM1764CBILEC7541.18529.5803.9771.0025.926C
ATOM1765CG2ILEC7542.61129.7463.4591.0025.066C
ATOM1766CG1ILEC7540.23229.4332.8121.0025.876C
ATOM1767CD1ILEC7539.60030.7882.4731.0025.996C
ATOM1768CILEC7541.83228.9646.2391.0029.956C
ATOM1769OILEC7541.64528.4557.3931.0029.328O
ATOM1770OTILEC7542.31330.1286.1061.0033.078O
ATOM1771CBVALD225.99133.21226.2921.0010.826C
ATOM1772CG1VALD225.19133.26024.9631.0010.546C
ATOM1773CG2VALD224.99833.47627.4351.0011.046C
ATOM1774CVALD227.63131.62725.3731.009.576C
ATOM1775OVALD228.62132.34025.3801.0012.238O
ATOM1776NVALD227.22731.64527.8641.0011.947N
ATOM1777CAVALD226.62931.84126.4861.0010.206C
ATOM1778NTHRD327.38730.77224.4181.0010.517N
ATOM1779CATHRD328.20130.53923.2331.0012.036C
ATOM1780CBTHRD328.46529.03423.0751.0012.436C
ATOM1781OG1THRD329.14228.58224.2491.0013.418O
ATOM1782CG2THRD329.32528.60021.8921.009.366C
ATOM1783CTHRD327.45331.04121.9841.0010.736C
ATOM1784OTHRD326.22430.92021.8441.008.608O
ATOM1785NALAD428.18031.72521.1101.008.657N
ATOM1786CAALAD427.52232.15019.8581.007.986C
ATOM1787CBALAD427.12233.62520.0251.006.696C
ATOM1788CALAD428.51931.98118.7121.008.866C
ATOM1789OALAD429.73432.02218.9971.006.468O
ATOM1790NPHED528.01531.83317.4881.006.657N
ATOM1791CAPHED528.88331.81716.3211.006.216C
ATOM1792CBPHED528.69130.57315.4661.006.586C
ATOM1793CGPHED529.30029.32616.0451.006.646C
ATOM1794CD1PHED528.59628.55016.9291.008.036C
ATOM1795CD2PHED530.59428.96415.7091.008.476C
ATOM1796CE1PHED529.13727.38317.4851.008.726C
ATOM1797CE2PHED531.15727.77116.2451.009.336C
ATOM1798CZPHED530.41727.02417.1081.009.516C
ATOM1799CPHED528.52933.04615.4781.008.926C
ATOM1800OPHED527.34733.36915.2261.007.438O
ATOM1801NILED629.57133.77815.0431.006.337N
ATOM1802CAILED629.32135.02014.3461.005.356C
ATOM1803CBILED629.96836.24214.9911.007.056C
ATOM1804CG2ILED629.51237.54414.3061.006.836C
ATOM1805CG1ILED629.68236.31216.4981.009.716C
ATOM1806CD1ILED630.58337.31217.2301.0010.386C
ATOM1807CILED629.96534.95212.9401.007.086C
ATOM1808OILED631.16734.68512.8401.006.638O
ATOM1809NLEUD729.15835.22311.9401.006.667N
ATOM1810CALEUD729.56935.26710.5341.008.266C
ATOM1811CBLEUD728.49034.6949.6251.009.396C
ATOM1812CGLEUD728.27833.1829.7191.0012.126C
ATOM1813CD1LEUD726.96432.8199.0011.0012.306C
ATOM1814CD2LEUD729.45232.4429.1131.0012.626C
ATOM1815CLEUD729.75336.72710.1731.009.446C
ATOM1816OLEUD728.96937.61210.5881.008.728O
ATOM1817NMETD830.88337.0699.5571.007.277N
ATOM1818CAMETD831.24838.4309.2671.007.956C
ATOM1819CBMETD832.49738.77010.1541.009.166C
ATOM1820CGMETD832.24038.57511.6371.0012.236C
ATOM1821SDMETD833.64239.02512.6681.009.9916S
ATOM1822CEMETD833.32338.19014.1981.0015.386C
ATOM1823CMETD831.69538.6407.8191.009.516C
ATOM1824OMETD832.46637.8187.2781.007.508O
ATOM1825NVALD931.38739.8297.3401.008.027N
ATOM1826CAVALD931.90540.3036.0471.0010.826C
ATOM1827CBVALD930.85440.7075.0001.0011.206C
ATOM1828CG1VALD931.50041.1693.6661.0011.056C
ATOM1829CG2VALD929.94039.5254.6501.0010.586C
ATOM1830CVALD932.81241.4826.4011.0010.746C
ATOM1831OVALD932.33042.3327.1621.0011.168O
ATOM1832NTHRD1034.04941.5035.9081.008.557N
ATOM1833CATHRD1034.95042.6056.2351.009.636C
ATOM1834CBTHRD1036.31642.1456.7881.007.416C
ATOM1835OG1THRD1037.06441.4895.7311.007.908O
ATOM1836CG2THRD1036.13441.1197.8921.006.206C
ATOM1837CTHRD1035.21443.4364.9761.0010.076C
ATOM1838OTHRD1034.88742.9023.9351.005.938O
ATOM1839NALAD1135.78144.6325.0431.008.157N
ATOM1840CAALAD1136.19345.3413.8621.0010.456C
ATOM1841CBALAD1136.77346.7374.2291.009.596C
ATOM1842CALAD1137.26144.5553.1151.0011.756C
ATOM1843OALAD1138.00843.7893.7441.0011.018O
ATOM1844NALAD1237.42844.8051.8131.0011.137N
ATOM1845CAALAD1238.43944.1061.0301.0011.806C
ATOM1846CBALAD1238.45644.611−0.4211.0011.096C
ATOM1847CALAD1239.83844.3301.5961.0010.466C
ATOM1848OALAD1240.15945.4591.9861.008.938O
ATOM1849NGLYD1340.63243.2731.6701.0011.637N
ATOM1850CAGLYD1342.01843.3522.1131.009.406C
ATOM1851CGLYD1342.04843.5633.6341.0010.226C
ATOM1852OGLYD1343.12243.9194.1071.007.698O
ATOM1853NLYSD1440.96543.3194.3651.008.007N
ATOM1854CALYSD1441.01543.5495.8071.0010.056C
ATOM1855CBLYSD1439.99144.6316.2181.0011.346C
ATOM1856CGLYSD1440.32346.0705.7651.0013.426C
ATOM1857CDLYSD1441.68546.5026.3431.0015.946C
ATOM1858CELYSD1441.97347.9656.0141.0017.066C
ATOM1859NZLYSD1443.25848.4336.6071.0015.637N
ATOM1860CLYSD1440.73942.3066.6121.008.736C
ATOM1861OLYSD1440.72942.3917.8491.008.728O
ATOM1862NGLUD1540.39241.1755.9951.008.247N
ATOM1863CAGLUD1540.01940.0186.8171.0011.306C
ATOM1864CBGLUD1539.55238.8406.0061.0012.746C
ATOM1865CGGLUD1540.56938.2105.0631.0013.466C
ATOM1866CDGLUD1539.89237.2204.1021.0015.236C
ATOM1867OE1GLUD1538.70236.8684.1201.0010.388O
ATOM1868OE2GLUD1540.65836.7003.2501.0017.698O
ATOM1869CGLUD1541.15239.6177.7581.0011.056C
ATOM1870OGLUD1540.86439.2978.9071.0011.868O
ATOM1871NARGD1642.38239.6337.3111.0011.967N
ATOM1872CAARGD1643.47239.2628.2081.0014.896C
ATOM1873CBARGD1644.80539.2207.4371.0017.846C
ATOM1874CGARGD1645.96639.0078.3881.0025.506C
ATOM1875CDARGD1647.26338.6217.6491.0031.986C
ATOM1876NEARGD1648.22038.1688.6501.0037.597N
ATOM1877CZARGD1649.44937.7048.5761.0040.876C
ATOM1878NH1ARGD1650.07337.5737.4041.0043.357N
ATOM1879NH2ARGD1650.07837.3599.6941.0041.617N
ATOM1880CARGD1643.58040.2659.3631.0011.576C
ATOM1881OARGD1643.84639.85610.4711.007.548O
ATOM1882NGLUD1743.50941.5749.0581.008.707N
ATOM1883CAGLUD1743.52042.59010.1041.0011.166C
ATOM1884CBGLUD1743.35643.9759.4641.0010.956C
ATOM1885CGGLUD1743.32145.16110.4421.0011.376C
ATOM1886CDGLUD1743.33646.4239.6141.0014.086C
ATOM1887OE1GLUD1744.23046.6268.7691.0011.498O
ATOM1888OE2GLUD1742.39147.2529.7561.0014.658O
ATOM1889CGLUD1742.41542.34511.1311.0010.846C
ATOM1890OGLUD1742.61042.53612.3601.009.098O
ATOM1891NVALD1841.22241.91710.6781.009.007N
ATOM1892CAVALD1840.14841.64111.6251.009.276C
ATOM1893CBVALD1838.80441.48810.8761.009.986C
ATOM1894CG1VALD1837.65741.05811.7921.009.936C
ATOM1895CG2VALD1838.44542.83710.2401.008.466C
ATOM1896CVALD1840.46740.42012.4751.008.326C
ATOM1897OVALD1840.31340.36613.7061.006.468O
ATOM1898NMETD1940.96639.37511.7761.005.787N
ATOM1899CAMETD1941.37038.17312.4701.007.846C
ATOM1900CBMETD1942.01237.10811.5441.007.186C
ATOM1901CGMETD1940.95536.42310.6741.0010.796C
ATOM1902SDMETD1940.06635.12311.5681.009.4316S
ATOM1903CEMETD1941.32033.84911.5851.0013.356C
ATOM1904CMETD1942.38038.51313.5801.008.796C
ATOM1905OMETD1942.39837.82114.5871.006.868O
ATOM1906NGLUD2043.32739.41713.2891.008.747N
ATOM1907CAGLUD2044.32239.79914.3311.0012.836C
ATOM1908CBGLUD2045.43540.64213.6991.0011.306C
ATOM1909CGGLUD2046.35739.65712.9301.0013.636C
ATOM1910CDGLUD2047.51940.36412.2531.0017.216C
ATOM1911OE1GLUD2047.59741.62012.2581.0017.528O
ATOM1912OE2GLUD2048.35239.65611.6221.0017.628O
ATOM1913CGLUD2043.63940.47215.5201.0012.426C
ATOM1914OGLUD2043.98040.20716.6731.0013.738O
ATOM1915NLYSD2142.61741.27515.2711.0010.667N
ATOM1916CALYSD2141.85441.86716.3651.0011.116C
ATOM1917CBLYSD2140.87842.95815.8921.0010.316C
ATOM1918CGLYSD2141.56844.25415.5631.0011.756C
ATOM1919CDLYSD2140.55145.27615.0621.0012.696C
ATOM1920CELYSD2141.19046.63214.7411.0014.756C
ATOM1921NZLYSD2140.10747.55614.2501.0012.597N
ATOM1922CLYSD2141.11540.79217.1361.008.786C
ATOM1923OLYSD2141.22940.69418.3721.0010.758O
ATOM1924NLEUD2240.46539.84616.4721.0010.467N
ATOM1925CALEUD2239.66738.80217.1341.008.876C
ATOM1926CBLEUD2238.92037.98016.0611.008.016C
ATOM1927CGLEUD2237.88338.80815.2711.0010.136C
ATOM1928CD1LEUD2237.46438.03314.0211.009.626C
ATOM1929CD2LEUD2236.66439.13716.1701.008.706C
ATOM1930CLEUD2240.53637.83717.9361.0010.006C
ATOM1931OLEUD2240.17137.49819.0771.007.478O
ATOM1932NLEUD2341.70737.41317.3941.007.027N
ATOM1933CALEUD2342.52136.49718.2031.0010.236C
ATOM1934CBLEUD2343.45935.68817.3091.0011.126C
ATOM1935CGLEUD2342.76734.91216.1801.0013.046C
ATOM1936CD1LEUD2343.72834.52815.0571.0011.716C
ATOM1937CD2LEUD2342.10733.66616.7531.0012.376C
ATOM1938CLEUD2343.23437.11519.3991.0010.476C
ATOM1939OLEUD2343.94336.41320.1571.0010.678O
ATOM1940NALAD2443.03238.37619.7411.008.717N
ATOM1941CAALAD2443.50439.01320.9281.0010.886C
ATOM1942CBALAD2444.14640.39520.6631.0010.616C
ATOM1943CALAD2442.29839.25021.8611.0012.756C
ATOM1944OALAD2442.58139.68922.9611.0011.808O
ATOM1945NMETD2541.07038.84221.4821.0010.787N
ATOM1946CAMETD2539.98439.16322.4431.0012.476C
ATOM1947CBMETD2538.72439.51321.6571.0011.876C
ATOM1948CGMETD2538.83740.70820.7241.009.436C
ATOM1949SDMETD2537.27940.90919.7511.007.9316S
ATOM1950CEMETD2537.65642.47218.9861.008.176C
ATOM1951CMETD2539.75637.98123.3641.0010.746C
ATOM1952OMETD2539.68936.83822.9071.0010.388O
ATOM1953NPROD2639.63838.17324.6621.0010.437N
ATOM1954CDPROD2639.57039.49525.3271.0011.376C
ATOM1955CAPROD2639.29737.06825.5521.0010.146C
ATOM1956CBPROD2638.97737.76026.9081.0011.476C
ATOM1957CGPROD2639.57139.12926.8041.0013.176C
ATOM1958CPROD2638.09436.22425.1471.008.786C
ATOM1959OPROD2638.11334.96125.3291.007.448O
ATOM1960NGLUD2737.06736.85624.5991.007.067N
ATOM1961CAGLUD2735.80936.17124.3021.009.616C
ATOM1962CBGLUD2734.69337.23224.0741.0010.966C
ATOM1963CGGLUD2734.49638.14225.2901.0013.966C
ATOM1964CDGLUD2735.37539.38725.2731.0015.976C
ATOM1965OE1GLUD2736.37939.45624.5321.0013.928O
ATOM1966OE2GLUD2734.93740.41125.8761.0016.968O
ATOM1967CGLUD2735.81835.29023.0701.008.196C
ATOM1968OGLUD2735.10434.29323.0341.006.208O
ATOM1969NVALD2836.86235.51222.2231.008.447N
ATOM1970CAVALD2836.93334.68820.9981.007.246C
ATOM1971CBVALD2837.73535.37119.8821.003.766C
ATOM1972CG1VALD2838.11534.47618.7581.003.756C
ATOM1973CG2VALD2836.99136.64819.3701.003.956C
ATOM1974CVALD2837.54733.35421.3081.009.276C
ATOM1975OVALD2838.70933.33021.7341.009.198O
ATOM1976NLYSD2936.86832.22821.0651.009.777N
ATOM1977CALYSD2937.43930.91121.2901.0010.826C
ATOM1978CBLYSD2936.35429.98921.8601.0012.936C
ATOM1979CGLYSD2935.70830.60623.0971.0015.226C
ATOM1980CDLYSD2936.57330.62224.3561.0016.506C
ATOM1981CELYSD2936.91932.06324.6741.0018.626C
ATOM1982NZLYSD2937.53332.33626.0091.0020.847N
ATOM1983CLYSD2938.02330.24220.0621.0011.206C
ATOM1984OLYSD2938.92829.39920.2131.0010.748O
ATOM1985NGLUD3037.52730.59118.8761.0010.267N
ATOM1986CAGLUD3038.06830.03817.6251.0010.816C
ATOM1987CBGLUD3037.65528.61517.2771.0013.906C
ATOM1988CGGLUD3036.19828.37516.9651.0018.666C
ATOM1989CDGLUD3035.86126.87616.7891.0020.566C
ATOM1990OE1GLUD3036.67826.02816.4481.0017.388O
ATOM1991OE2GLUD3034.68426.50816.9561.0021.708O
ATOM1992CGLUD3037.67531.01116.5121.0010.066C
ATOM1993OGLUD3036.60931.64616.6171.007.378O
ATOM1994NALAD3138.50231.17715.5071.008.027N
ATOM1995CAALAD3138.20032.11914.4211.007.126C
ATOM1996CBALAD3138.80733.48914.6831.008.426C
ATOM1997CALAD3138.74531.56513.1171.008.886C
ATOM1998OALAD3139.88431.02013.1441.008.658O
ATOM1999NTYRD3237.99931.61312.0011.005.437N
ATOM2000CATYRD3238.54631.04510.7961.006.366C
ATOM2001CBTYRD3237.99029.67410.3911.008.156C
ATOM2002CGTYRD3238.42628.51511.2561.0010.646C
ATOM2003CD1TYRD3239.54527.76510.9301.0013.776C
ATOM2004CE1TYRD3239.92026.68211.7111.0015.516C
ATOM2005CD2TYRD3237.75428.22712.4191.0011.246C
ATOM2006CE2TYRD3238.11527.17313.2171.0012.746C
ATOM2007CZTYRD3239.20126.41912.8611.0014.106C
ATOM2008OHTYRD3239.53325.37713.6841.0016.308O
ATOM2009CTYRD3238.15431.8739.5601.007.986C
ATOM2010OTYRD3237.04032.4169.5861.007.948O
ATOM2011NVALD3339.07431.8778.6111.006.387N
ATOM2012CAVALD3338.75832.5367.3481.007.526C
ATOM2013CBVALD3339.98132.9906.5361.008.076C
ATOM2014CG1VALD3339.56733.5175.1621.006.286C
ATOM2015CG2VALD3340.72334.0767.3301.007.686C
ATOM2016CVALD3337.96831.4756.5951.007.236C
ATOM2017OVALD3338.39830.2996.6811.0010.008O
ATOM2018NVALD3436.78431.7736.0551.006.327N
ATOM2019CAVALD3436.02430.7155.3721.006.206C
ATOM2020CBVALD3434.70830.3806.0881.008.456C
ATOM2021CG1VALD3434.87029.5687.3871.008.526C
ATOM2022CG2VALD3433.92031.6736.4191.008.056C
ATOM2023CVALD3435.68731.1953.9591.008.316C
ATOM2024OVALD3435.64932.4303.6971.008.448O
ATOM2025NTYRD3535.50630.2873.0431.007.607N
ATOM2026CATYRD3535.03530.5401.6931.0010.706C
ATOM2027CBTYRD3534.99229.1450.9661.0013.946C
ATOM2028CGTYRD3536.28728.6480.4061.0019.416C
ATOM2029CD1TYRD3536.50028.632−0.9761.0021.686C
ATOM2030CE1TYRD3537.70828.179−1.4991.0023.696C
ATOM2031CD2TYRD3537.33428.1961.2321.0021.936C
ATOM2032CE2TYRD3538.53327.7390.6951.0021.216C
ATOM2033CZTYRD3538.71427.728−0.6721.0023.196C
ATOM2034OHTYRD3539.90727.295−1.2501.0023.558O
ATOM2035CTYRD3533.57031.0041.7021.009.186C
ATOM2036OTYRD3532.88730.7882.7191.007.058O
ATOM2037NGLYD3633.11431.5500.5831.009.237N
ATOM2038CAGLYD3631.70331.8820.4201.008.596C
ATOM2039CGLYD3631.33533.3300.6691.0010.036C
ATOM2040OGLYD3632.19734.2270.7091.008.038O
ATOM2041NGLUD3730.03833.5300.9941.009.607N
ATOM2042CAGLUD3729.55334.8741.1901.0013.846C
ATOM2043CBGLUD3728.04234.8881.2221.0020.206C
ATOM2044CGGLUD3727.30234.2442.3381.0026.346C
ATOM2045CDGLUD3725.82634.6492.2981.0029.656C
ATOM2046OE1GLUD3724.96633.7602.3351.0033.058O
ATOM2047OE2GLUD3725.50535.8442.2791.0032.098O
ATOM2048CGLUD3730.15635.5892.3931.0013.266C
ATOM2049OGLUD3730.25736.8182.3161.0011.838O
ATOM2050NTYRD3830.46334.8953.4581.0011.247N
ATOM2051CATYRD3831.11335.5254.6091.0013.226C
ATOM2052CBTYRD3830.60234.9205.9241.0014.416C
ATOM2053CGTYRD3829.12535.2416.0861.0017.446C
ATOM2054CD1TYRD3828.75136.4736.6071.0019.666C
ATOM2055CE1TYRD3827.40436.7936.7411.0022.876C
ATOM2056CD2TYRD3828.16434.3325.6901.0019.086C
ATOM2057CE2TYRD3826.80634.6275.8171.0021.266C
ATOM2058CZTYRD3826.46035.8516.3601.0023.156C
ATOM2059OHTYRD3825.14636.1716.5151.0025.728O
ATOM2060CTYRD3832.63235.3214.5471.0012.416C
ATOM2061OTYRD3833.08934.3074.0131.008.378O
ATOM2062NASPD3933.40036.2895.0611.0011.847N
ATOM2063CAASPD3934.84636.1275.0641.0010.076C
ATOM2064CBASPD3935.51737.5265.1401.0012.256C
ATOM2065CGASPD3935.11538.2913.8661.0012.996C
ATOM2066OD1ASPD3935.28937.6662.8021.0011.908O
ATOM2067OD2ASPD3934.60239.4083.9761.0012.158O
ATOM2068CASPD3935.28535.2996.2531.008.986C
ATOM2069OASPD3936.21334.5166.1391.009.588O
ATOM2070NLEUD4034.65835.5247.4161.005.507N
ATOM2071CALEUD4035.08834.8298.6331.007.686C
ATOM2072CBLEUD4035.71535.9429.5461.008.526C
ATOM2073CGLEUD4036.83736.7939.0091.0014.096C
ATOM2074CD1LEUD4037.16837.9969.9191.0013.286C
ATOM2075CD2LEUD4038.11035.9388.8011.0014.056C
ATOM2076CLEUD4033.95234.2369.4611.007.296C
ATOM2077OLEUD4032.83434.7709.4311.007.508O
ATOM2078NILED4134.22533.29110.3081.006.527N
ATOM2079CAILED4133.34732.65911.2511.008.656C
ATOM2080CBILED4132.75731.29410.8661.007.096C
ATOM2081CG2ILED4133.76330.13610.7381.007.766C
ATOM2082CG1ILED4131.71430.86411.9331.007.446C
ATOM2083CD1ILED4130.88229.69211.4301.008.476C
ATOM2084CILED4134.09532.70112.5861.0010.106C
ATOM2085OILED4135.29332.40812.6851.009.038O
ATOM2086NVALD4233.39133.05913.6691.0010.097N
ATOM2087CAVALD4234.07333.17014.9781.0010.736C
ATOM2088CBVALD4234.40434.61415.3881.0013.006C
ATOM2089CG1VALD4233.24535.36216.0631.0014.996C
ATOM2090CG2VALD4235.47134.83016.4251.0012.346C
ATOM2091CVALD4233.15932.54016.0081.009.226C
ATOM2092OVALD4231.93932.78215.9401.009.438O
ATOM2093NLYSD4333.73931.80416.9341.006.577N
ATOM2094CALYSD4332.97631.28118.0491.007.496C
ATOM2095CBLYSD4333.24229.81418.2981.008.666C
ATOM2096CGLYSD4332.50929.24019.5021.0010.986C
ATOM2097CDLYSD4332.98727.75619.5271.0012.076C
ATOM2098CELYSD4332.76527.09920.8731.0014.036C
ATOM2099NZLYSD4333.32725.69520.7681.0012.837N
ATOM2100CLYSD4333.37032.07219.2771.007.786C
ATOM2101OLYSD4334.58632.29119.4971.008.738O
ATOM2102NVALD4432.38732.62119.9721.008.737N
ATOM2103CAVALD4432.62933.46821.1291.007.446C
ATOM2104CBVALD4432.31034.94120.9051.008.986C
ATOM2105CG1VALD4433.07235.52219.7051.007.876C
ATOM2106CG2VALD4430.80635.15420.6491.008.946C
ATOM2107CVALD4431.79832.95622.3041.009.016C
ATOM2108OVALD4430.83732.20922.1171.009.608O
ATOM2109NGLUD4532.25433.19723.5251.009.317N
ATOM2110CAGLUD4531.67832.77024.7531.0012.526C
ATOM2111CBGLUD4532.39231.58125.4361.0014.386C
ATOM2112CGGLUD4532.12730.26524.6851.0018.546C
ATOM2113CDGLUD4532.97929.11425.1841.0022.446C
ATOM2114OE1GLUD4533.02528.07024.5141.0023.218O
ATOM2115OE2GLUD4533.61329.22126.2631.0023.958O
ATOM2116CGLUD4531.71533.96325.7181.0013.186C
ATOM2117OGLUD4532.69134.68725.7851.0010.668O
ATOM2118NTHRD4630.60234.24126.3801.0013.367N
ATOM2119CATHRD4630.52735.29827.3811.0013.786C
ATOM2120CBTHRD4629.80536.57026.9151.0015.756C
ATOM2121OG1THRD4628.45036.17126.6481.0014.488O
ATOM2122CG2THRD4630.48837.20025.7101.0015.696C
ATOM2123CTHRD4629.79134.67928.5741.0014.476C
ATOM2124OTHRD4629.06933.66328.4181.0013.338O
ATOM2125NASPD4729.93835.29529.7351.0013.957N
ATOM2126CAASPD4729.33634.72530.9291.0016.996C
ATOM2127CBASPD4729.73435.40932.2471.0022.346C
ATOM2128CGASPD4731.17335.19032.6391.0027.626C
ATOM2129OD1ASPD4731.82534.35931.9471.0031.218O
ATOM2130OD2ASPD4731.71335.78233.6051.0030.678O
ATOM2131CASPD4727.81934.86430.8281.0014.126C
ATOM2132OASPD4727.15333.94031.2271.0015.128O
ATOM2133NTHRD4827.29735.96930.3271.0011.977N
ATOM2134CATHRD4825.87536.18930.2441.0013.156C
ATOM2135CBTHRD4825.37337.23631.2401.0013.156C
ATOM2136OG1THRD4826.01738.51130.9731.0015.418O
ATOM2137CG2THRD4825.61236.80432.6921.0014.046C
ATOM2138CTHRD4825.44636.74228.8771.0014.576C
ATOM2139OTHRD4826.29137.15528.0651.0012.388O
ATOM2140NLEUD4924.12536.73328.6851.0011.237N
ATOM2141CALEUD4923.58337.28427.4371.0013.736C
ATOM2142CBLEUD4922.06537.08027.3391.0012.516C
ATOM2143CGLEUD4921.36437.55826.0691.0014.186C
ATOM2144CD1LEUD4922.01437.00224.8171.0011.036C
ATOM2145CD2LEUD4919.88137.08826.1431.0013.296C
ATOM2146CLEUD4923.85538.77827.3381.0013.406C
ATOM2147OLEUD4924.10239.37426.2961.0013.308O
ATOM2148NLYSD5023.65239.47128.4621.0013.927N
ATOM2149CALYSD5023.91640.89228.5441.0016.346C
ATOM2150CBLYSD5023.69141.32730.0191.0020.476C
ATOM2151CGLYSD5023.30242.79330.0721.0026.886C
ATOM2152CDLYSD5024.07543.53831.1511.0031.086C
ATOM2153CELYSD5023.80445.04631.1081.0032.486C
ATOM2154NZLYSD5023.83645.59332.5091.0034.987N
ATOM2155CLYSD5025.34841.23028.1481.0013.336C
ATOM2156OLYSD5025.61442.24027.4681.0013.398O
ATOM2157NASPD5126.29940.41128.5631.0012.487N
ATOM2158CAASPD5127.69240.62628.1461.0015.106C
ATOM2159CBASPD5128.66339.75928.9471.0016.356C
ATOM2160CGASPD5128.72840.31530.3771.0018.786C
ATOM2161OD1ASPD5128.46541.52730.5531.0019.848O
ATOM2162OD2ASPD5129.03639.46831.2171.0019.288O
ATOM2163CASPD5127.86840.32926.6591.0012.696C
ATOM2164OASPD5128.70140.97926.0281.0014.638O
ATOM2165NLEUD5227.18739.30626.1391.0011.087N
ATOM2166CALEUD5227.24639.10724.6851.0010.836C
ATOM2167CBLEUD5226.45637.86424.2671.0010.106C
ATOM2168CGLEUD5226.60537.46222.7931.009.506C
ATOM2169CD1LEUD5228.00136.86522.5231.009.816C
ATOM2170CD2LEUD5225.52936.46422.4051.007.726C
ATOM2171CLEUD5226.70440.33123.9761.0012.036C
ATOM2172OLEUD5227.28940.83722.9851.0010.168O
ATOM2173NASPD5325.54640.85924.4791.0011.647N
ATOM2174CAASPD5324.98342.04323.8601.0012.956C
ATOM2175CBASPD5323.75042.58224.5951.0014.346C
ATOM2176CGASPD5322.56341.63024.6091.0015.636C
ATOM2177OD1ASPD5322.44940.68423.7911.0015.628O
ATOM2178OD2ASPD5321.69141.82425.4921.0016.348O
ATOM2179CASPD5326.04043.14723.6881.0015.696C
ATOM2180OASPD5326.15043.77922.6271.0013.418O
ATOM2181NGLND5426.71443.45424.7821.0015.397N
ATOM2182CAGLND5427.75044.49024.8261.0019.046C
ATOM2183CBGLND5428.19644.59526.2861.0021.116C
ATOM2184CGGLND5428.91145.88626.6191.0030.346C
ATOM2185CDGLND5429.35545.89728.0701.0035.436C
ATOM2186OE1GLND5429.03845.00128.8731.0038.748O
ATOM2187NE2GLND5430.13146.93628.3901.0037.617N
ATOM2188CGLND5428.94344.19523.9291.0013.996C
ATOM2189OGLND5429.38845.02823.1621.0012.658O
ATOM2190NPHED5529.44742.97823.9781.0015.437N
ATOM2191CAPHED5530.58642.55423.1341.0013.506C
ATOM2192CBPHED5530.89741.09323.4831.0012.426C
ATOM2193CGPHED5532.00240.54922.6021.0011.546C
ATOM2194CD1PHED5533.31941.01522.7671.009.956C
ATOM2195CD2PHED5531.71339.57121.6681.009.646C
ATOM2196CE1PHED5534.29240.45321.9361.0012.196C
ATOM2197CE2PHED5532.70539.01020.8741.0010.136C
ATOM2198CZPHED5534.00239.46521.0261.009.996C
ATOM2199CPHED5530.25542.71421.6531.0013.586C
ATOM2200OPHED5530.88843.51020.9151.0010.928O
ATOM2201NILED5629.10742.11921.2551.0010.767N
ATOM2202CAILED5628.78542.18919.8301.0011.966C
ATOM2203CBILED5627.57941.27819.4981.0013.956C
ATOM2204CG2ILED5627.09641.40418.0561.0012.246C
ATOM2205CG1ILED5628.01139.89819.9471.0014.496C
ATOM2206CD1ILED5628.16138.77719.0111.0018.976C
ATOM2207CILED5628.49143.58219.3491.0013.516C
ATOM2208OILED5628.92643.98318.2561.0013.028O
ATOM2209NTHRD5727.71044.34120.1101.0015.607N
ATOM2210CATHRD5727.32645.67519.6211.0017.806C
ATOM2211CBTHRD5726.04846.21020.2971.0019.236C
ATOM2212OG1THRD5726.18046.12521.7111.0022.038O
ATOM2213CG2THRD5724.81045.35220.0281.0020.736C
ATOM2214CTHRD5728.51846.63619.7441.0020.356C
ATOM2215OTHRD5728.82447.29518.7291.0022.008O
ATOM2216NGLUD5829.38946.53020.7441.0020.177N
ATOM2217CAGLUD5830.51047.42620.8761.0023.726C
ATOM2218CBGLUD5830.77347.81922.3551.0027.156C
ATOM2219CGGLUD5829.55748.53622.9671.0030.146C
ATOM2220CDGLUD5829.38049.91922.3371.0033.676C
ATOM2221OE1GLUD5830.39650.63022.0411.0035.188O
ATOM2222OE2GLUD5828.20450.28522.1091.0034.268O
ATOM2223CGLUD5831.81846.93020.2861.0022.926C
ATOM2224OGLUD5832.50747.78519.7231.0022.338O
ATOM2225NLYSD5932.20445.66020.4041.0020.117N
ATOM2226CALYSD5933.47345.22319.8731.0020.106C
ATOM2227CBLYSD5934.11144.11320.7191.0021.486C
ATOM2228CGLYSD5934.20744.51322.1991.0027.966C
ATOM2229CDLYSD5935.42445.37322.5001.0030.316C
ATOM2230CELYSD5935.42745.86523.9461.0032.736C
ATOM2231NZLYSD5935.73747.34724.0281.0034.317N
ATOM2232CLYSD5933.39644.69418.4381.0019.096C
ATOM2233OLYSD5934.44544.62117.7561.0019.418O
ATOM2234NILED6032.26344.09018.0911.0013.827N
ATOM2235CAILED6032.20043.48916.7621.0012.956C
ATOM2236CBILED6031.55642.11816.8491.0012.026C
ATOM2237CG2ILED6031.41241.54415.4291.0011.696C
ATOM2238CG1ILED6032.33541.13517.7501.0012.066C
ATOM2239CD1ILED6033.81041.03917.5461.0012.306C
ATOM2240CILED6031.54544.41215.7291.0014.626C
ATOM2241OILED6032.12644.82214.7271.0010.098O
ATOM2242NARGD6130.27844.77415.9691.0014.657N
ATOM2243CAARGD6129.52345.61015.0451.0016.076C
ATOM2244CBARGD6128.03845.57915.5001.0016.926C
ATOM2245CGARGD6127.36344.21215.2621.0017.476C
ATOM2246CDARGD6125.89344.27515.6401.0022.166C
ATOM2247NEARGD6125.08643.06315.7051.0020.807N
ATOM2248CZARGD6123.79942.86715.4961.0020.736C
ATOM2249NH1ARGD6122.94043.81715.1831.0021.087N
ATOM2250NH2ARGD6123.19441.69215.6741.0019.707N
ATOM2251CARGD6130.08147.00714.8341.0015.306C
ATOM2252OARGD6129.91947.54813.7291.0012.838O
ATOM2253NLYSD6230.86247.58115.7261.0013.697N
ATOM2254CALYSD6231.53748.84515.6121.0016.286C
ATOM2255CBLYSD6231.35549.67116.9101.0019.576C
ATOM2256CGLYSD6229.96550.34316.7321.0021.096C
ATOM2257CDLYSD6229.34750.57418.0731.0024.816C
ATOM2258CELYSD6228.16051.53917.9651.0026.496C
ATOM2259NZLYSD6227.74451.69819.3991.0032.177N
ATOM2260CLYSD6232.99148.77715.1851.0015.486C
ATOM2261OLYSD6233.61949.79414.9101.0013.018O
ATOM2262NMETD6333.48347.57514.9301.0013.647N
ATOM2263CAMETD6334.84047.46914.3471.0014.056C
ATOM2264CBMETD6335.25046.00214.3711.0014.966C
ATOM2265CGMETD6336.70245.76513.9951.0017.596C
ATOM2266SDMETD6337.07744.01713.7781.0016.0016S
ATOM2267CEMETD6336.81643.39415.4471.0016.246C
ATOM2268CMETD6334.79848.08412.9501.0012.086C
ATOM2269OMETD6333.99847.74012.0791.008.648O
ATOM2270NPROD6435.69249.01112.6241.0012.287N
ATOM2271CDPROD6436.72349.57113.5781.0013.066C
ATOM2272CAPROD6435.61049.76011.3981.0011.606C
ATOM2273CBPROD6436.74950.76711.4501.0014.096C
ATOM2274CGPROD6437.17550.83812.8741.0014.476C
ATOM2275CPROD6435.69748.90710.1371.0011.666C
ATOM2276OPROD6435.14449.3379.1171.009.208O
ATOM2277NGLUD6536.51847.85510.1331.007.967N
ATOM2278CAGLUD6536.67046.9788.9901.0010.896C
ATOM2279CBGLUD6537.85846.0249.2211.0013.556C
ATOM2280CGGLUD6539.18746.8249.5381.0013.786C
ATOM2281CDGLUD6539.46146.98311.0331.0016.556C
ATOM2282OE1GLUD6538.48447.04911.8441.0012.898O
ATOM2283OE2GLUD6540.64947.09911.4961.0015.868O
ATOM2284CGLUD6535.40646.1388.6821.0011.196C
ATOM2285OGLUD6535.35045.4237.6801.007.508O
ATOM2286NILED6634.51945.9529.6741.0010.127N
ATOM2287CAILED6633.36145.0709.5501.0011.606C
ATOM2288CBILED6632.97044.48010.9181.0013.046C
ATOM2289CG2ILED6631.59143.82510.9161.0013.136C
ATOM2290CG1ILED6634.09843.48611.3001.0013.416C
ATOM2291CD1ILED6633.79742.45012.3391.0016.266C
ATOM2292CILED6632.24745.7608.7851.0012.886C
ATOM2293OILED6631.84246.8939.0841.0011.948O
ATOM2294NGLND6731.69045.0487.8201.0013.327N
ATOM2295CAGLND6730.56545.5707.0311.0013.816C
ATOM2296CBGLND6730.87645.3135.5371.0017.326C
ATOM2297CGGLND6732.06546.0945.0031.0020.786C
ATOM2298CDGLND6732.25845.9723.5031.0025.966C
ATOM2299OE1GLND6732.98446.7692.8741.0026.838O
ATOM2300NE2GLND6731.66644.9572.8801.0026.967N
ATOM2301CGLND6729.24944.8837.3661.0014.116C
ATOM2302OGLND6728.20445.5207.2601.0012.998O
ATOM2303NMETD6829.23443.5967.6871.0013.177N
ATOM2304CAMETD6827.97542.9188.0121.0014.616C
ATOM2305CBMETD6827.29242.5266.7071.0017.396C
ATOM2306CGMETD6827.45541.0406.4411.0026.396C
ATOM2307SDMETD6825.98340.1126.9461.0028.9516S
ATOM2308CEMETD6825.08940.3215.3791.0031.956C
ATOM2309CMETD6828.26941.7458.9241.0012.166C
ATOM2310OMETD6829.37441.1638.8871.008.958O
ATOM2311NTHRD6927.35241.4099.8261.0010.007N
ATOM2312CATHRD6927.54840.28610.7501.009.186C
ATOM2313CBTHRD6927.97340.67912.1801.0010.806C
ATOM2314OG1THRD6926.96541.51712.7381.0010.148O
ATOM2315CG2THRD6929.26641.53312.2071.008.796C
ATOM2316CTHRD6926.20939.55110.8851.0010.486C
ATOM2317OTHRD6925.17740.20410.8251.009.218O
ATOM2318NSERD7026.23738.26011.1341.008.787N
ATOM2319CASERD7025.03637.49311.4561.0011.096C
ATOM2320CBSERD7024.66236.70210.1891.0012.336C
ATOM2321OGSERD7023.49335.99410.5101.0013.288O
ATOM2322CSERD7025.40136.62212.6481.0012.056C
ATOM2323OSERD7026.39735.87012.5671.0012.328O
ATOM2324NTHRD7124.70036.67313.7691.0010.517N
ATOM2325CATHRD7125.09735.89014.9521.009.856C
ATOM2326CBTHRD7125.20336.84416.1561.0011.186C
ATOM2327OG1THRD7126.20337.82115.9111.008.768O
ATOM2328CG2THRD7125.51736.18617.5081.0012.676C
ATOM2329CTHRD7124.12034.79515.2611.008.826C
ATOM2330OTHRD7122.91635.05115.2401.009.458O
ATOM2331NMETD7224.62933.58815.4741.006.607N
ATOM2332CAMETD7223.85432.46315.8461.007.676C
ATOM2333CBMETD7224.17531.26214.9301.009.496C
ATOM2334CGMETD7223.68731.55913.5001.0014.916C
ATOM2335SDMETD7224.47830.50212.2691.0015.3716S
ATOM2336CEMETD7226.14431.12312.2021.0017.366C
ATOM2337CMETD7224.12432.07817.3061.007.836C
ATOM2338OMETD7225.18431.45817.5661.008.058O
ATOM2339NILED7323.21232.37918.1861.008.097N
ATOM2340CAILED7323.33232.01619.6101.008.996C
ATOM2341CBILED7322.41032.88020.4711.009.516C
ATOM2342CG2ILED7322.28832.35421.9201.0011.366C
ATOM2343CG1ILED7322.97334.31520.5351.0011.166C
ATOM2344CD1ILED7321.93635.36320.8961.0011.786C
ATOM2345CILED7323.03830.54219.7751.0011.336C
ATOM2346OILED7322.03630.00019.2671.0011.928O
ATOM2347NALAD7423.94929.82420.4141.0012.817N
ATOM2348CAALAD7423.80928.41520.6741.0016.286C
ATOM2349CBALAD7425.12227.72821.0841.0017.946C
ATOM2350CALAD7422.87528.19521.8861.0018.406C
ATOM2351OALAD7422.93628.91422.8791.0016.198O
ATOM2352NILED7522.20827.07021.8261.0020.417N
ATOM2353CAILED7521.49626.53122.9681.0024.596C
ATOM2354CBILED7520.39125.58122.4891.0025.976C
ATOM2355CG2ILED7520.11524.42723.4391.0026.436C
ATOM2356CG1ILED7519.12626.38522.1941.0024.836C
ATOM2357CD1ILED7519.02126.71720.7091.0027.916C
ATOM2358CILED7522.52025.79223.8261.0027.536C
ATOM2359OILED7523.52225.17323.3401.0029.128O
ATOM2360OTILED7522.26325.85825.0441.0029.738O
ATOM2361OHOHW110.12248.3092.6321.0071.678O
ATOM2362OHOHW243.51540.3354.2751.002.028O
ATOM2363OHOHW325.09640.04614.3911.004.728O
ATOM2364OHOHW414.30948.2571.2871.0011.988O
ATOM2365OHOHW539.90340.7073.0721.004.598O
ATOM2366OHOHW613.99328.92716.0501.008.168O
ATOM2367OHOHW7−2.82444.3318.6151.006.778O
ATOM2368OHOHW846.75844.13712.5431.009.808O
ATOM2369OHOHW922.05738.36330.8081.0010.538O
ATOM2370OHOHW1041.58830.8098.9601.0014.978O
ATOM2371OHOHW1132.06136.737−0.4381.0013.108O
ATOM2372OHOHW1225.62143.69912.0421.0012.218O
ATOM2373OHOHW1341.64343.04519.8191.0012.148O
ATOM2374OHOHW1418.59835.09017.4311.007.058O
ATOM2375OHOHW1535.64246.8700.5891.0014.258O
ATOM2376OHOHW16−2.30945.12015.3491.005.198O
ATOM2377OHOHW1721.14834.15317.1441.009.288O
ATOM2378OHOHW1810.04249.43321.0521.0016.668O
ATOM2379OHOHW1924.90743.4429.5091.008.068O
ATOM2380OHOHW2040.34029.25422.5261.0015.148O
ATOM2381OHOHW2124.11053.07816.0161.0013.148O
ATOM2382OHOHW2230.70431.9053.9191.0015.568O
ATOM2383OHOHW2316.09540.41425.0051.0019.018O
ATOM2384OHOHW24−4.34151.4290.0891.0010.328O
ATOM2385OHOHW2534.57738.9970.9261.0010.618O
ATOM2386OHOHW2631.43248.78611.6761.0011.018O
ATOM2387OHOHW2732.09737.71529.4751.0010.308O
ATOM2388OHOHW28−2.89839.48516.0731.0012.228O
ATOM2389OHOHW2922.45934.85630.4721.0017.048O
ATOM2390OHOHW30−10.08435.45515.6931.0011.278O
ATOM2391OHOHW3144.40444.37213.6871.007.678O
ATOM2392OHOHW3230.98742.12527.2301.0018.758O
ATOM2393OHOHW3324.80529.50924.7971.0010.678O
ATOM2394OHOHW3413.34525.15011.3641.0012.888O
ATOM2395OHOHW3544.40442.6406.4981.006.668O
ATOM2396OHOHW3613.42256.153−1.7491.0015.978O
ATOM2397OHOHW3719.47635.36030.7241.0011.738O
ATOM2398OHOHW389.10942.5631.6351.006.868O
ATOM2399OHOHW3940.43223.4855.4371.0012.808O
ATOM2400OHOHW4042.09630.24011.7761.0014.428O
ATOM2401OHOHW4142.87337.97225.8581.0011.478O
ATOM2402OHOHW429.77032.55331.6371.0015.138O
ATOM2403OHOHW43−6.90249.5496.1901.009.478O
ATOM2404OHOHW4428.55530.8582.2211.0013.418O
ATOM2405OHOHW45−1.38738.89922.4331.0011.378O
ATOM2406OHOHW4637.40440.6002.6091.0014.028O
ATOM2407OHOHW4722.53131.79529.7791.0017.698O
ATOM2408OHOHW4823.04838.79714.2181.0014.698O
ATOM2409OHOHW4917.94335.40210.7291.0020.018O
ATOM2410OHOHW505.17454.657−2.8221.0017.908O
ATOM2411OHOHW5113.24620.75019.2831.0029.298O
ATOM2412OHOHW5248.03237.21111.4891.0016.878O
ATOM2413OHOHW5330.20920.17820.6111.0018.818O
ATOM2414OHOHW5423.51322.82421.4911.0020.268O
ATOM2415OHOHW5521.56129.53025.2231.0020.528O
ATOM2416OHOHW5642.11136.44328.2081.0019.478O
ATOM2417OHOHW5740.87629.66115.9781.0016.068O
ATOM2418OHOHW5816.49434.45313.0281.0025.558O
ATOM2419OHOHW59−0.85746.40817.8581.0016.378O
ATOM2420OHOHW6032.82125.9710.7951.0016.718O
ATOM2421OHOHW6145.62745.1176.5191.0018.948O
ATOM2422OHOHW6221.97640.99713.6611.0017.378O
ATOM2423OHOHW6315.83630.09915.3881.0015.618O
ATOM2424OHOHW6430.46926.20724.2531.0022.518O
ATOM2425OHOHW6516.71846.85920.9291.0014.888O
ATOM2426OHOHW6610.42543.68625.1151.0019.648O
ATOM2427OHOHW6721.11230.36911.4321.0024.238O
ATOM2428OHOHW6817.19127.88614.6041.0016.408O
ATOM2429OHOHW69−1.31355.9748.4691.0020.488O
ATOM2430OHOHW70−5.61649.2922.5461.0014.238O
ATOM2431OHOHW7118.41059.4470.8111.0016.238O
ATOM2432OHOHW724.67943.28424.1301.0026.978O
ATOM2433OHOHW7328.21048.0037.1051.0025.138O
ATOM2434OHOHW7424.47250.09717.0321.0018.438O
ATOM2435OHOHW7544.76947.1654.7121.0020.428O
ATOM2436OHOHW7620.45633.03410.8011.0021.218O
ATOM2437OHOHW7727.09624.6760.5831.0016.788O
ATOM2438OHOHW7845.46343.7722.7541.0019.588O
ATOM2439OHOHW7936.90242.15224.3141.0019.898O
ATOM2440OHOHW8025.02831.90431.0351.0025.708O
ATOM2441OHOHW8119.95131.77931.1511.0020.258O
ATOM2442OHOHW822.82156.5995.1101.0024.518O
ATOM2443OHOHW830.24038.31826.5321.0020.618O
ATOM2444OHOHW84−5.50128.9628.6431.0025.678O
ATOM2445OHOHW8515.08016.02418.8271.0023.798O
ATOM2446OHOHW8617.45352.2492.6151.0024.268O
ATOM2447OHOHW8710.40841.10629.5511.0025.178O
ATOM2448OHOHW88−1.00836.08724.2491.0022.038O
ATOM2449OHOHW8928.71528.4201.4961.0033.158O
ATOM2450OHOHW9026.47948.31017.1761.0014.808O
ATOM2451OHOHW914.54421.02822.0601.0023.398O
ATOM2452OHOHW927.06220.09015.3361.0017.958O
ATOM2453OHOHW93−8.08752.0158.1981.0013.318O
ATOM2454OHOHW9413.71842.09626.9081.0015.238O
ATOM2455OHOHW95−5.92531.26022.8751.0018.508O
ATOM2456OHOHW962.26247.97719.7281.0022.038O
ATOM2457OHOHW9739.22248.0451.7911.0023.008O
ATOM2458OHOHW9813.20260.20712.6941.0018.828O
ATOM2459OHOHW9935.59247.97518.1241.0021.608O
ATOM2460OHOHW10032.40549.7189.0911.0023.238O
ATOM2461OHOHW10132.53040.01327.3541.0026.888O
ATOM2462OHOHW10215.21419.03219.4031.0031.358O
ATOM2463OHOHW10329.69349.4219.1971.0018.958O
ATOM2464OHOHW10434.77034.97027.7121.0036.848O
ATOM2465OHOHW10513.52557.91619.0611.0024.008O
ATOM2466OHOHW10622.20134.39712.4531.0027.968O
ATOM2467OHOHW10735.58049.7926.4501.0017.818O
ATOM2468OHOHW10828.72238.6690.8821.0028.338O
ATOM2469OHOHW109−1.55226.41423.8251.0025.548O
ATOM2470OHOHW1106.58643.93226.8461.0030.408O
ATOM2471OHOHW11126.22221.7331.7261.0027.898O
ATOM2472OHOHW11238.81611.8536.9531.0031.388O
ATOM2473OHOHW11340.80410.936−0.3381.0043.848O
ATOM2474OHOHW11414.46523.1605.0121.0035.948O
ATOM2475OHOHW11529.27451.39612.6341.0031.238O
ATOM2476OHOHW11636.11126.05321.7041.0027.888O
ATOM2477OHOHW11748.72040.9198.8611.0027.148O
ATOM2478OHOHW11816.85735.2408.2651.0029.178O
ATOM2479OHOHW11940.27215.140−2.4301.0028.868O
ATOM2480OHOHW1208.46439.3953.4691.0026.298O
ATOM2481OHOHW12124.99150.95319.8681.0038.398O
ATOM2482OHOHW12232.49443.85225.4751.0020.948O
ATOM2483OHOHW12342.90720.5695.9481.0020.988O
ATOM2484OHOHW12411.40960.427−4.2121.0022.378O
ATOM2485OHOHW12541.93217.910−0.4841.0024.918O
ATOM2486OHOHW126−6.11427.30210.6621.0025.668O
ATOM2487OHOHW12726.13721.37121.9781.0029.828O
ATOM2488OHOHW1288.21661.21410.7231.0030.538O
ATOM2489OHOHW12926.11811.52220.3911.0026.638O
ATOM2490OHOHW13038.98615.328−4.5681.0035.288O
ATOM2491OHOHW13132.54551.68612.9971.0034.458O
ATOM2492OHOHW13210.69128.09029.6281.0023.738O
ATOM2493OHOHW13342.53451.0957.2221.0027.358O
ATOM2494OHOHW13424.31944.66127.4261.0029.688O
ATOM2495OHOHW13527.18427.90826.1191.0029.018O
ATOM2496OHOHW13612.48223.2869.7181.0025.908O
ATOM2497OHOHW13713.72558.6506.3821.0030.098O
ATOM2498OHOHW13816.82430.08533.8611.0029.638O
ATOM2499OHOHW13925.53840.40832.8711.0025.508O
ATOM2500OHOHW140−4.60142.5986.4601.0028.508O
ATOM2501OHOHW141−4.31455.8001.4731.0023.988O
ATOM2502OHOHW1424.18040.7292.9681.0038.798O
ATOM2503OHOHW1432.88034.2753.9751.0035.328O
ATOM2504OHOHW14422.68541.1169.8711.0037.588O
ATOM2505OHOHW1455.91142.2221.2931.0038.188O
ATOM2506OHOHW146−0.03732.7816.9461.0036.958O
ATOM2507OHOHW1479.63720.34910.1391.0025.048O
ATOM2508OHOHW14828.38243.8153.1791.0043.718O
ATOM2509OHOHW14922.09059.0946.7991.0036.678O
ATOM2510OHOHW15010.61240.0370.9861.0030.458O
ATOM2511OHOHW15133.82249.0944.6721.0031.898O
ATOM2512OHOHW15210.34315.11817.3801.0041.688O
ATOM2513OHOHW15317.03738.04631.6841.0036.098O
ATOM2514OHOHW154−4.21157.6505.7301.0037.598O
ATOM2515OHOHW15510.36030.6795.0561.0035.828O
ATOM2516OHOHW1569.31930.37730.1501.0045.138O
ATOM2517OHOHW15732.53746.73825.6701.0042.218O
ATOM2518OHOHW158−7.04033.39221.5641.0029.978O
ATOM2519OHOHW15925.48757.68713.4231.0056.418O
ATOM2520OHOHW16022.39027.49327.7031.0051.268O
ATOM2521OHOHW161−1.94432.59429.0021.0035.608O
ATOM2522OHOHW16219.49457.98615.7031.0027.668O
ATOM2523OHOHW1634.21834.783−0.0311.0037.958O
ATOM2524OHOHW16410.87861.6762.4391.0040.138O
ATOM2525OHOHW16532.37832.68429.5661.0039.108O
ATOM2526OHOHW16640.74227.82918.7011.0032.588O
ATOM2527OHOHW16715.40753.31422.6741.0035.338O
ATOM2528OHOHW16824.52550.8944.2091.0030.858O
ATOM2529OHOHW16924.22747.55813.8501.0013.128O
ATOM2530OHOHW17019.46940.38225.0521.0014.838O
ATOM2531OHOHW17125.44945.43513.2881.0034.428O
ATOM2532OHOHW17236.86945.89618.1151.0021.208O
ATOM2533OHOHW17312.01228.4779.1381.0029.458O
ATOM2534OHOHW17416.35941.4793.5851.0038.608O
ATOM2535OHOHW17534.32631.763−2.1611.002.028O
ATOM2536OHOHW17617.65552.366−0.1741.0022.738O
ATOM2537OHOHW17714.40448.51721.7391.0025.458O
ATOM2538OHOHW17843.74932.2008.0201.0029.028O
ATOM2539OHOHW17915.59226.82916.1741.0048.168O
ATOM2540OHOHW18010.52556.368−4.0811.0030.238O
ATOM2541OHOHW1818.71325.94228.3481.0025.778O
ATOM2542OHOHW18229.7377.23711.8501.0033.688O
ATOM2543OHOHW18321.16433.4397.9661.0038.288O
ATOM2544OHOHW18424.11946.14924.3771.0037.238O
ATOM2545OHOHW18521.75356.69210.1211.0033.118O
ATOM2546OHOHW18617.58538.44812.4021.0039.358O
ATOM2547OHOHW187−2.75438.36111.9161.0044.688O
ATOM2548OHOHW18816.63927.32818.2351.0024.468O
ATOM2549OHOHW18914.61534.2568.5341.0041.848O
ATOM2550OHOHW19014.51443.80125.1571.0033.678O
ATOM2551OHOHW19126.46930.0023.8661.0053.628O
ATOM2552OHOHW1923.41628.1074.1311.0047.378O
ATOM2553OHOHW19315.41427.53111.2471.0040.298O
ATOM2554OHOHW19424.62858.2216.0321.0037.028O
ATOM2555OHOHW195−1.97151.69017.1471.0035.288O
ATOM2556OHOHW19616.65923.68026.3031.0037.618O
END
|
[Advantages]
By using the present invention, it becomes possible to identify accurately and efficiently FFRPs regulating metabolism, growth, and infectivity of bacteria. Targeting the identified FFRPs, antimicrobial agents can be searched by using a known ligand screening method, or by a virtual screening method using 3D structure information.
Sequence Listing
- <110> National Institute of Advanced Industrial Science and Technology(AIST)
- <120> Method of Screening for Antimicrobial Agents
- <130> 334-03166
- <140>
- <141>
- <160> 33
- <170> PatentIn Ver. 2.1
- <210> 1
- <211> 157
- <212> PRT
- <213> Pseudomonas aeruginosa
- <220>
- <223> Inventor: Suzuki, Masashi; Koike, Hideaki
FIG. 1 shows correlation between amino acid sequences of different FFRPs (i.e., a multiple alignment) coded in the genomes of various bacteria. Hydrophobic phase inside α-helices are marked with asterisks (*), with types of residues, isoleucine, valine, leucine, and methionine in these phases highlighted in bold. Outside the α-helices at each position, the type of residues most frequently found is highlighted in bold.
[FIG. 2]
FIG. 2 is a diagram showing phylogenetic relations between FFRPs.
In this diagram, nodes characterized with bootstrap values of 500 or higher are colored in red. Nodes characterized with smaller bootstrap values, 350 or higher but less than 500, are indicated by closed circles colored in black. Four demi-FFRPs are colored in green, and the two subgroups together covering the eight P. aeruginosa FFRPs are colored in red and blue, respectively.
[FIG. 3]
FIG. 3 shows the thirty-two amino acid positions where pharmaceutical agents will bind. In this figure along the line, “(iii) Modeling of leucine binding”, residues producing conflicts (X) or no conflict (O) when leucine is modeled to fit pot1216151 are indicated.
[FIG. 4]
FIG. 4 show a wire model of the crystal structure of an FFRP (pot1216151) derived from an archaeon (Pyrococcus OT3). In this figure, the electron densities of two molecules of an unidentified ligand derived from E. coli are colored in red.
[FIG. 5]
FIG. 5 shows an enlargement of the electron density of the ligand shown in FIG. 4, to which a valine molecule is best fit. In this figure, the valine molecule is represented by a wire model, and the atoms are differentiated: oxygen (red), nitrogen (blue), and carbon (yellow). Hydrogen atoms are omitted.
[FIG. 6]
FIG. 6 shows residues of pot1216151 positioned within 6 Å from the unidentified assembly promotion factor derived from E. coli, and residues of other FFRP molecules occupying the identical positions. Residues found in E. coli Lrp but not found in EcO468065 at the same positions are colored in red, residues found in Ec0468065 but not found in E. coli Lrp at the same positions are colored in blue, and residues found in both at the same positions are colored in green.
[FIG. 7]
FIG. 7 shows positions potentially important for leucine-binding by E. coli Lrp, and the residues of archaeal FFRPs found at the same positions. In this figure, residues found in E. coli Lrp but not found in Ec0468065 at the same positions are colored in red, residues found in Ec0468065 but not found in E. coli Lrp are colored in blue, and residues found in both are colored in green.
[FIG. 8]
FIG. 8 shows a ribbon diagram of the crystal structure of pot1216151 with coloring seven positions important for leucine-binding by E. coli Lrp in blue.
[FIG. 9]
FIG. 9 shows a ribbon diagram of leucine (yellow) binding to pot1216151. FIG. 9 shows a view looked along the arrow shown in FIG. 10: two dimers closest to the arrow and a leucine molecule are shown. In the upper half of this model, positions the same as those colored in blue in FIG. 8 are highlighted in the same color, i.e., in blue. Meanwhile, residues forming the gap between the two dimers are highlighted in green. In the lower half of this model, residues contacting the modeled leucine molecule with no conflict are colored in blue, and three other residues positioned conflicting with the leucine molecule are colored in red.
[FIG. 10]
FIG. 10 is a ribbon diagram of a model of leucine-binding to pot1216151.
[FIG. 11]
FIG. 11 shows residues of pot1216151 positioned close to the leucine molecule modeled to fit the protein, and residues of other FFRP molecules occupying the same positions as those in pot1216151. In this figure, residues found in E. coli Lrp but not found in Ec0468065 at the same positions are colored in red, residues found in Ec0468065 but not found in E. coli Lrp at the same positions are colored in blue, and residues found in both at the same positions are colored in green.
[FIG. 12]
FIG. 12 shows residues of pot1216151 whose side chains are facing the gaps formed between the dimers, and residues of other FFRPs occupying the same positions. In this figure, residues found in E. coli Lrp but not found in Ec0468065 at the same positions are colored in red, residues found in Ec0468065 but not found in E. coli Lrp at the same positions are colored in blue, and residues found in both at the same positions are colored in green.
[FIG. 13]
FIG. 13 shows a partial rearrangement of the thirty-two positions shown in FIG. 3.
[FIG. 14]
FIG. 14 shows positions of FFRPs identified as important for DNA recognition. In this figure, residues found in E. coli Lrp but not found in Ec0468065 at the same positions are colored in red, residues found in Ec0468065 but not found in E. coli Lrp at the same positions are colored in blue, and residues found in both at the same positions are colored in green.
[FIG. 15]
FIG. 15 shows a ribbon diagram of the 3D structure of a dimer of the FFRP (pot1216151) in two views.
[FIG. 16]
FIG. 16 shows profiles of gel filtration of the FFRP pot1216151 purified using different methods: mild (black, purification 1) and rigorous (red, purification 2).
[FIG. 17]
FIG. 17 shows profiles of gel filtration of the FFRP pot1216151. In this diagram, profiles shown are those obtained in the absence (black) or presence of chemical compounds: amino acids (a, b) and other metabolic intermediates (c), malic acid (red), 2-oxoglutaric acid (green), and oxaloacetic acid (blue).