The present disclosure relates to a method or system for operating and cleaning a sample processing instrument and a sample processing instrument including the system, e.g., a flow cytometer sorter or analyzer.
This section only provides background information related to the present disclosure, which is not necessarily prior art.
A sample processing instrument is usually configured to analyze a liquid sample including small suspended particles (e.g., biological particles such as extracellular vesicles, non-biological particles such as beads) or cells and/or to sort the particles or cells therein. The sample processing instrument generally processes multiple samples, and after a sample is processed, it needs to be cleaned to avoid inaccurate processing results for the next sample.
Some sample processing instruments are known to be cleaned with the use of sheath fluid. However, the sheath fluid is not necessarily suitable for all types of samples. In other words, some samples may not be cleaned well. If another cleaning agent is used to clean the sample processing instrument, it may be necessary to manually load the cleaning agent into the sample processing instrument, for example, in a semi-automatic loader. This may significantly reduce the cleaning efficiency.
In addition, it is not easy for users to accurately monitor and learn the result of cleaning with respect to traditional sample processing instruments. This is disadvantageous for detection of samples, especially, samples that contain small particles (e.g., nanoparticles) that are not easily cleaned.
This section provides a general summary of the disclosure and is not a comprehensive disclosure of its full scope or all of its features.
An object of the present disclosure is to provide a method and system capable of automatically running and cleaning a sample processing instrument between different samples processed by the sample processing instrument.
Another object of the present application is to provide a method capable of automatically and continuously monitoring the cleaning of a sample processing instrument.
Yet another object of the present application is to provide a method that is convenient for users to operate and intuitively monitor the cleaning of the sample processing instrument.
According to an aspect of the present application, there is provided a method for operating and monitoring the cleaning of a sample processing instrument, comprising steps, performed by a control device, of: directing a first sample through a flow cell in the sample processing instrument, wherein the first sample comprises first particles; processing the first sample; cleaning the flow cell of the sample processing instrument with a cleaning agent; measuring a carryover amount in the flow cell after the cleaning, wherein the carryover amount comprises a measurement associated with an amount of the first particles remaining in a measurement region of the flow cell; comparing the measured carryover amount against a predetermined target value, wherein the target value corresponds to a value indicative of a cleaning requirement; and determining, based on the comparison, whether the cleaning requirement is met.
In some embodiments according to the present application, the method further comprises: repeating the cleaning step when it is determined that the cleaning requirement is not met; and stopping a cleaning process when it is determined that the cleaning requirement has been met or when the number of cleaning reaches a maximum threshold.
In some embodiments according to the present application, the target value is input by a user.
In some embodiments according to the present application, the cleaning step comprises selecting a cleaning agent from a plurality of cleaning agents configured to clean the flow cell.
In some embodiments according to the present application, at least one of the cleaning agents comprises a sheath liquid.
In some embodiments according to the present application, the measuring step comprises: pumping the monitoring solution through the flow cell; and measuring light scattered from within the flow cell, wherein the measured light corresponds to the carryover amounts in the flow cell.
In some embodiments according to the present application, the monitoring solution is different from the cleaning agent. In some embodiments, the monitoring solution is water. In other embodiments, the monitoring solution is a buffer.
In some embodiments according to the present application, the measuring comprises: measuring a count of carryovers and/or monitoring a volume of monitoring solution.
In some embodiments according to the present application, the carryover amount may be a count of carryover particles. In some embodiments the count of the carryover particles and/or the volume of the monitoring solution is the total count of carryover particles and/or the total volume of monitoring solution measured during a monitoring period, or a count of carryover particles and/or a volume of monitoring solution measured at predetermined intervals during the monitoring period.
In some embodiments according to the present application, the method further comprises calculating, by the control device, based on the measured carryover amount, a value representative of relevance of the carryover amount to the monitoring solution (e.g., a value of concentration of the carryovers in the monitoring solution) and/or a value representative of relevance of the carryover amounts after cleaning and an amount of the first particles in a sample before cleaning (e.g., a value of ratio of the carryovers to the particles).
In some embodiments according to the present application, the method further comprises calculating a ratio of the carryover amount after the cleaning to an amount of the first particles detected in the first sample, or a ratio of a concentration of the carryovers measured after cleaning to a concentration of the first particles in the first sample.
In some embodiments according to the present application, the method further comprises: directing a second sample through the sample processing instrument following the determination that the cleaning requirement is met; and processing the second sample.
In some embodiments according to the present application, the second sample is directed through the sample processing instrument automatically by the control device in response to the determination that the cleaning requirement is met.
In some embodiments according to the present application, the first particles comprise biological nanoparticles.
In some embodiments according to the present application, the sample processing instrument is a flow cytometer, and wherein processing the first sample comprises determining one or more properties of the first particles in the first sample by directing an optical beam toward the flow cell and measuring light emitted or scattered from within the flow cell.
In some embodiments according to the present application, the method further comprises providing a user interface for being operated by a user and displaying information to the user.
In some embodiments according to the present application, before the cleaning, an operation window is displayed on the user interface for a user to operate, and wherein the operation window comprises at least one of: options for selecting a process to be run, dialog boxes for inputting parameters and/or target values associated with the selected option, and fields for setting cleaning standards for cleaning/monitoring a flow cells after a particular sample is processed (e.g., as described below with respect to
In some embodiments according to the present application, during the cleaning or the measuring, a status window is displayed on the user interface, and wherein a running status is displayed on the status window.
In some embodiments according to the present application, after the measuring, a result viewing window is displayed on the user interface, and wherein a running result is displayed on the result viewing window.
In some embodiments according to the present application, measured carryover amount is displayed in real time on the user interface.
In some embodiments according to the present application, control buttons are provided on the windows of the user interface for controlling a next activity.
According to another aspect of the present application, there is provided a method for operating and monitoring the cleaning of a sample processing instrument, comprising, by a computing system associated with the sample processing instrument: displaying, on a user interface, a menu comprising at least one next-activity element; displaying, on the user interface, a parameter setting element in response to a user selection of the at least one next-activity element, wherein the parameter setting element is configured to set a target carryover amount in a flow cell of the sample processing instrument; receiving a user input at the parameter setting element, wherein the user input specifies the target carryover amount; receiving carryover data corresponding to a measurement of particles present in a monitoring solution within the flow cell; deriving an actual carryover amount according to the received carryover data; and displaying, on the user interface, one or more monitoring elements representing the measured carryover amount, the actual carryover amount and/or the target carryover amount.
In some embodiments according to the present application, the method further comprises: determining a cleaning level by comparing the actual carryover amount with the target carryover amount; and displaying, on the user interface, the cleaning level. The cleaning level comprises a first level indicating that a cleaning requirement is met and a second level indicating that the cleaning requirement is not met.
In some embodiments according to the present application, the method further comprises, when the second level is determined, repeating a cleaning cycle and then a monitoring cycle until maximum cleaning cycles are reached. Receiving the user input comprises inputting parameters associated with the cleaning cycle and the monitoring cycle at the parameter setting element, and wherein the parameters comprise the maximum cleaning cycles.
In some embodiments according to the present application, the method further comprises displaying, on the user interface, status of the cleaning cycle and the monitoring cycle.
In some embodiments according to the present application, the status of the cleaning cycle and the monitoring cycle comprises running process of the cleaning cycle, the number of the cleaning cycle which is performing, and running process of the monitoring cycle.
In some embodiments according to the present application, the monitoring elements comprise a graph showing the measured carryover data.
In some embodiments according to the present application, the graph comprises a histogram, a scatter dot plot, a density plot, a pseudocolor plot, or a contour plot.
In some embodiments according to the present application, the graph shows carryover signal intensity vs carryover count.
In some embodiments according to the present application, the parameter setting element is further configured to set a cleaning standard for cleaning/monitoring a flow cells after a particular sample is processed (e.g., as described below with respect to
In some embodiments according to the present application, the parameter setting element comprises a dialog box, a text field, a slider element, a dropdown list, and/or a radio button.
In some embodiments according to the present application, the method further comprises: displaying, on the user interface, a setting-applicable-sample element in response to a user selection of the at least one next-activity element, wherein the setting-applicable-sample element is configured to specify samples to be monitored with the same user input at the parameter setting element; and receiving at the setting-applicable-sample element a user input to specify the samples to which the same user input at the parameter setting element is applied.
In some embodiments according to the present application, each of the actual carryover amount and the target carryover amount is showed in text, in a graph and or in a table.
In some embodiments according to the present application, the actual carryover amount and the target carryover amount are showed in a same graph or table.
In some embodiments according to the present application, the method further comprises: storing monitoring data of each sample; and displaying, on the user interface, the monitoring data of the one or more samples in response to a user request for one or more samples by the at least one next-activity element.
In some embodiments according to the present application, the target carryover amount comprises at least one of a target carryover count, a target carryover rate, a target carryover concentration and a target percentage of carryover concentration; and the actual carryover amount accordingly comprises at least one of an actual carryover count, an actual carryover rate, an actual carryover concentration and an actual percentage of carryover concentration.
In some embodiments according to the present application, the method further comprises displaying, on the user interface, control elements for starting, stopping, interrupting, cancelling, repeating the method or a step of the method.
In some embodiments according to the present application, the control elements comprise control buttons.
According to an aspect of the present application, there is provided a system for operating and monitoring the cleaning of a sample processing instrument, comprising: a fluid pipeline communicating fluid sources to a flow cell of the sample processing instrument; a pump arranged in the fluid pipeline; and a control device. The control device is configured to: direct a first sample through the flow cell in the sample processing instrument, wherein the first sample comprises first particles; process the first sample; control the pump to pump a cleaning agent through the fluid pipeline for cleaning the flow cell, and pump a monitoring solution through the fluid pipeline; measure a carryover amount in the cleaned flow cell, wherein the carryover amount comprises a measurement associated with an amount of the first particles remaining in a measurement region of the flow cell; compare the measured carryover amount against a predetermined target value, wherein the target value corresponds to a value indicative of a cleaning requirement; and determine, based on the comparison, whether the cleaning requirement is met.
In some embodiments according to the present application, the control device is further configured to: repeatedly clean the flow cell when it is determined that the cleaning requirement is not met; and stop a cleaning process when it is determined that the cleaning requirement has been met or when the number of cleaning reaches a maximum threshold.
In some embodiments according to the present application, the system further comprises a switching device, wherein the switching device is configured to enable the pump to be in fluid communication selectively with a sample needle fitted in the flow cell or a sample source of the fluid sources.
In some embodiments according to the present application, the switching device comprises a three-way valve including a first port connected to the pump, a second port connected to the sample needle and a third port connected to the sample source, and wherein the three-way valve is switched between a first position allowing the pump to communicate with the sample needle and a second position allowing the pump to communicate with the sample source.
In some embodiments according to the present application, the pump is communicated with at least two cleaning agents.
In some embodiments according to the present application, the at least two cleaning agents include sheath fluid.
In some embodiments according to the present application, the pump includes a first pump for pumping the sheath fluid and a second pump for selectively pumping the other cleaning agent and the monitoring solution.
In some embodiments according to the present application, the monitoring solution is water. In other embodiments, the monitoring solution is a buffer.
According to another aspect of the present application, there is provided a sample processing instrument comprising the cleaning system described above.
According to another aspect of the present application, there is provided a computer-readable medium on which a program is stored. The program is executed by a processor of a control device (e.g., on an associated personal computing device, on a dedicated device, etc.) to implement the method described above.
The above and other purposes, features and advantages of the present disclosure are fully understood through the detailed description and the drawings given for describing rather than limiting the present disclosure.
The features and advantages of one or more embodiments of the present disclosure will become more readily understood from the following description with reference to the accompanying drawings in which:
The present application is described in detail hereinafter by means of exemplary embodiments with reference to the accompanying drawings. In the several drawings, similar reference numerals indicate similar parts and components. The following detailed description of the present application is for explanation only and is by no means intended to limit the present application and the applications or usages thereof. The embodiments described in this specification are not exhaustive, but are only some of a number of possible embodiments. The exemplary embodiments may be implemented in many different forms, and should not be construed as limiting the scope of the present application. In some exemplary embodiments, well-known processes, well-known device structures, and well-known technologies may not be described in detail.
Before at least one embodiment of the present application is explained in detail, it is to be understood that the present application is not limited in its application to the details of construction and the arrangement of the components set forth in the following description or illustrated in the drawings. The invention is applicable to other embodiments that may be practiced or carried out in various ways as well as to combinations of the disclosed embodiments. In addition, it is to be understood that the phraseology and terminology employed herein are for the purpose of description and should not be regarded as limiting.
Unless specifically stated otherwise, as apparent from the following discussions, it is appreciated that throughout the specification discussions utilizing terms such as “controlling”, “processing”, “calculating”, “determining”, “deriving” or the like, refer to the action and/or processes of a computer or computing system, or similar electronic computing device, that manipulates and/or transforms data represented as physical, such as electronic, quantities within the computing system's registers and/or memories into other data similarly represented as physical quantities within the computing system's memories, registers or other such information storage, transmission or display devices.
The sample processing instrument according to the present disclosure will be described by taking a flow cytometer as an example. Flow cytometers are used to detect particles in a sample to determine one or more characteristics of the particles. However, it should be understood that the sample processing instrument according to the present disclosure is not limited to a flow cytometer, and may be any other suitable instrument for processing biological samples or non-biological samples. In some embodiments, the sample processing instrument may be a cell or particle sorter.
The sample processing instrument according to the present disclosure is suitable for automatically performing the cleaning process between processing different samples, for automatically performing the cleaning process using different cleaning agents, and for automatically performing the monitoring process of measuring the cleaning result after the cleaning process. The system may additionally automatically determine the next action according to the measurement result. Additionally, the system may provide an interface to a user to enable to user to easily operate and intuitively observe the monitoring and cleaning process. The main functional parts of the sample processing instrument 1 will be described below with reference to
The fluidics components 10 are configured to supply various fluids to the flow cell 20 and to discharge the fluid out of the flow cell 20. The fluids described herein may include samples to be analyzed, sorted or otherwise processed, sheath fluid, cleaning agents, waste fluids, and the like.
The fluidics components 10 may include various pumps, valves, pressure regulating devices, sensors, etc., for delivering fluid or discharging fluid.
Various fluids, particularly samples and sheath fluid are delivered to the flow cell 20. Referring to
The sample processing unit 30 processes the sample wrapped in the sheath fluid flowing through the cuvette 26. For example, the sample processing unit 30 may measure characteristics of particles/cells in the sample and quantify the particles/cells having particular characteristics, and/or the sample processing unit 30 may sort particles/cells in the sample based on their characteristics. The sample processing unit 30 may include various optical devices, electrical devices, and/or mechanical devices according to the aim of sample processing.
The control unit 40 controls the operation of the entire sample processing instrument 1. The various functions, actions, or steps of the various systems, devices, components, or methods of the sample processing instrument according to the present application are controlled by the control unit 40. The control unit 40 will be described in detail below.
An example of fluidics components according to an embodiment of the present application will be described below with reference to
These fluid sources may include a sample source 101, a sheath source (not shown), a waste reservoir, and other solution sources. The sample source 101 is used to supply samples. Generally, the sample source 101 includes multiple sample containers containing different samples, for example, a well plate, a test tube, and the like. The sheath fluid is stored in the sheath source. Sheath liquid is the matrix liquid that helps the sample flow to be detected normally, and may function to wrap around the sample flow and keep it in the center of the nozzle to ensure the accuracy of detection while preventing particles in the sample flow from approaching the nozzle wall and blocking the nozzle. In addition, the sheath fluid may also be used as a cleaning agent for cleaning the sample processing instrument (especially, the flow cell and the fluid pipelines). Other solution sources include a fluid container 103 storing other cleaning agents (for example, water or another special cleaning solution) rather than the sheath fluid, and a separate container (not shown) storing a monitoring solution (for example, water or a buffer) for measuring the cleaning result of the sample processing instrument. The waste reservoir is used to collect the waste liquid after sample processing and cleaning of the sample processing instrument.
Referring to
Various pumps for pumping various fluids may be provided in the fluid pipeline. In the example shown in
Various switching devices may be provided in the fluid pipeline, for example, for switching the flowing direction of the fluid or for controlling the on-off state of the fluid. The switching device may include various types of valves. As shown in
The three-way valve 132 is configured to selectively communicate the sample pipelines 111 to 113 with different pumps (for example, the sample pump 121 or the cleaning pump 123) to suck or pump different fluids (for example, the sample or the cleaning agent) to the flow cell 20 or the sample source 101. In the example of
The three-way valve 131 is configured to selectively communicate a pump (e.g., the sample pump 121 or the cleaning pump 123) with the sample source 101 or the flow cell 20 to selectively suck or pump fluid (e.g., the sample or the cleaning agent) to the flow cell 20 or the sample source 101. In the example of
By the three-way valves 131 and 132, it is possible to selectively pump the sample to the flow cell 20 to, for example, analyze the sample, or pump the cleaning agent to the sample source 101 or the flow cell 20 to clean the sample pipelines 111 to 113 or the flow cell 20.
The cleaning pump 123 is connected to the third port 1323 of the three-way valve 132 via a cleaning agent pipeline 144, and is connected to the fluid container 103 via a cleaning agent pipeline 142. An on-off valve 141 may be provided in the cleaning agent pipeline 142 to control the on-off state of the cleaning agent pipeline 142. In case of sucking the cleaning agent, the on-off valve 141 is in a closed state to allow communication of the cleaning agent pipeline 142. In case of no need to suck the cleaning agent, the on-off valve 141 is in an open state to interrupt the communication of the cleaning agent pipeline 142.
The sheath pump 125 is arranged between the sheath pipeline 117 connected to the sheath source and the sample pump 121 to deliver the sheath fluid to the sample source 101 or the flow cell 20 via the sample pump 121, so as to clean the sample pipelines 111-113 or the flow cell 20 with the sheath fluid. The sheath pump 125 is connected to the sheath pipeline 117 (or the sheath source) via the sheath cleaning pipeline 153, and is connected to the sample pump 121 via the sheath cleaning pipeline 154. An on-off valve 151 may be provided in the sheath cleaning pipeline 153 to control the on-off state of the sheath cleaning pipeline 153. In case that the sheath fluid is sucked for cleaning, the on-off valve 151 is in a closed (i.e., on) state to allow communication of the sheath cleaning pipeline 153. In case of no need to suck the sheath fluid, the on-off valve 151 is in an open (i.e., off) state to interrupt the communication of the sheath cleaning pipeline 153. Furthermore, an on-off valve 152 may be provided in the sheath cleaning pipeline 154 to control the on-off state of the sheath cleaning pipeline 154. In case of pumping the sheath fluid, the on-off valve 152 is in a closed (i.e., on) state to allow the communication of the sheath cleaning pipeline 154. In case of no need to pump the sheath fluid, the on-off valve 152 is in an open (i.e., off) state to interrupt the communication of the sheath cleaning pipeline 154.
It should be understood that the system according to the present application is not limited to the specific example shown in
The process of conveying a sample through the fluidic system 100 during sample processing will be described below with reference to
As shown in
Then, as shown in
During the sample processing, the sample pump 121 is always connected to the sample pipeline 113, and the three-way valve 131 is repeatedly switched between the second port 1312 and the third port 1313 to repeatedly perform the processes of sucking and pumping samples until the sample processing is finished.
The process of cleaning the sample pipelines 111 to 113 and the flow cell 20 by the fluidic system 100 using the cleaning agent will be described below with reference to
As shown in
As shown in
In the case that the sample pipeline 113 is connected to the sample pipeline 111 as shown in
In the case that the sample pipeline 113 is connected to the sample pipeline 112 as shown in
The process of cleaning the sample pipelines 111 to 113 and the flow cell 20 by the fluidic system 100 using the sheath liquid will be described below with reference to
As shown in
Then, as shown in
In the case that the sample pipeline 113 is connected to the sample pipeline 111 as shown in
In the case that the sample pipeline 113 is connected to the sample pipeline 112 as shown in
In addition to the sample processing and cleaning processes described above, the system may also be used for monitoring the cleaning of the sample processing instrument.
In some embodiments, sample source 101 may be filled with a monitoring solution (e.g., water, a buffer), instead of a sample, in between analyses of two different samples. For example, a first sample in a sample source 101 may be analyzed by the system 100, the system 100 may be cleaned with a cleaning agent from the fluid container 103, and then sample source 101 may be switched for a different sample source 101 filled with a monitoring solution for monitoring the flow cell 20 for the presence of carryover. In some cases, the monitoring solution and the cleaning agent may be the same fluid, for example, water.
In some embodiments, the cleaning agent may be the monitoring solution, in which case the fluid container 103 may be used as the source of the monitoring solution as well as the cleaning agent. In this case, the process of feeding the monitoring solution through the flow cell 20 during the monitoring process may be similar to the process of feeding the cleaning agent through the flow cell 20 during the cleaning process.
In some embodiments, a separate fluid container (i.e., a container other than the sample source 101 and the fluid container 103) may be provided to contain the monitoring solution. In this case, the same pump as other fluids or an additional pump may be used to pump the monitoring solution through the flow cell 20. The fluid pipeline for the monitoring solution may be integrated into other fluid pipelines like the sheath cleaning pipeline, or may be an independent fluid pipeline from the fluid container containing the monitoring solution to the flow cell 20. Similarly, the sheath cleaning pipeline may also be formed as an independent fluid pipeline from the sheath source to the flow cell 20 and the sample pipeline, that is, it does not pass through the sample pump 121.
As described above, the structure of the disclosed systems and their fluidics components are not limited to the specific examples described and shown above, but can be varied as long as it can realize automatic cleaning/monitoring processes or automatic cleaning process with different cleaning agents. Furthermore, since the structure of the disclosed systems can be changed, the operation method of the disclosed systems can be changed accordingly.
Hereinafter, a method 500 for cleaning and monitoring the sample processing instrument 1 by means of the above-mentioned disclosed systems according to an embodiment of the present application will be described with reference to
The sample processing instrument 1 firstly feeds a first sample containing first particles through the flow cell 20 via the pipelines of the system, and processes the first sample, for example, detecting or sorting the first particles. The first particles are, for example, biological nanoparticles. After the first sample has been processed, there may be a need to process a second sample. For accurate results, the flow cell 20 and one or more pipelines of the system may need to be washed in between successive samples to prevent particles from the first sample from affecting the results of processing the second sample. It is generally difficult to remove these leftover particles, referred to herein as carryover, especially when the particles are of a small size. Therefore, in order to ensure the accurate processing of the second sample, the sample processing instrument 1 (especially, the sample pipeline and the flow cell) must be adequately cleaned.
According to the first sample (especially, the first particle), a suitable cleaning agent (e.g., sheath fluid, water and/or any other suitable cleaning solution), cleaning parameters (e.g., duration of one cleaning cycle, number of cleaning cycles, maximum number of cleaning cycles, etc.), monitoring solution (e.g., water) and/or monitoring parameters can be selected or set. The monitoring parameters may include parameters associated with the monitored solution (e.g., delivery time or volume, etc.), populations associated with monitored particles or monitoring parameters (e.g., monitoring criteria indicating that cleaning requirements are met). The monitoring standard may be embodied in various forms, for example, the target carryover count within a predetermined time, the target carryover concentration/concentration percentage, the target carryover rate (number/second), and so on. Example settings of cleaning parameters and monitoring parameters and criteria may be seen in
Then, at step S51, the sample processing instrument 1 is cleaned by the selected cleaning agent according to the set cleaning parameters. In a cleaning cycle, the selected cleaning agent may be one, two or more. Correspondingly, cleaning parameters may be set for each cleaning agent. The cleaning parameters may be determined based on experimental data, historical data or experimental data. After a cleaning cycle or a predetermined number of cleaning cycles, proceed to step S52.
At step S52, the monitoring solution is pumped through the flow cell 20 by the fluidics components. The sample processing instrument 1 then analyzes the flow cell 20 including the monitoring solution during the monitoring period (see step S53).
At step S53, a measurement value related to the carryover or the monitoring solution during the monitoring period is obtained, for example, the amount of the carryover (first particle) and/or the flow rate of the monitoring solution. The flow rate of the monitoring solution may be measured by one or more sensors. For example, for a sample processing instrument 1 that is a flow cytometer, the measurement may be performed by measuring light scattered from the flow cell 20 in response to one or more laser beams directed at the flow cell 20. In this example, the carryover (first particles remaining in the flow cell 20) may be counted by, for example, an optical detection system based on the detected light scattered or emitted from the particles. In the same monitoring time, the lower the amount of carryover (e.g., a count or approximate count of the number of carryover particles remaining in the flow cell 20 during the monitoring period), the better the cleaning results. Of course, as the monitoring time is longer, the amount of carryover detected is greater. If the measured value is not sufficient to indicate the cleaning level, proceed to step S54.
At step S54, based on the measured value obtained at step S53, a value that accurately indicates the cleaning level may be calculated. For example, the value may be a carryover rate (number/second) (carryover particles detected during monitoring divided by monitoring time), a carryover concentration (number/microliter) (number of carryover particles detected during monitoring divided by volume of monitoring solution), or a carryover concentration percentage (ratio of carryover concentration to concentration of the first particle in the first sample). It should be understood that, if the measurement value obtained at step S53 is sufficient to indicate the cleaning level, step S54 can be omitted.
At step S55, the calculated value at step S54 or the measured value at step S53 (for example, if step S54 is omitted) may be compared with a target value as the monitoring standard. In the case that the measured or calculated value (actual value) is less than or equal to the target value, it indicates that the cleaning requirement has been met, and proceed to step S56. In the case that the measured or calculated value (actual value) is greater than the target value, it indicates that the cleaning requirement has not been met, and then proceed to step S57. In some embodiments, the target value may be based on the first sample, the second sample, or the type of processing that is occurring. For example, different samples or different sample processing/analyses may have different target values.
At step S56, since the cleaning requirement has been met, the cleaning process is stopped and ready for processing the next sample. Optionally, at step S56, the user may be notified that the cleaning requirement has been met. The second sample may be then automatically transported through the flow cell and processed at the flow cell.
At step S57, it is further determined whether the maximum cleaning limit has been reached, for example, the set maximum cleaning duration limit (e.g., a maximum limit on the total amount of time spent in one or more cleaning cycles) or the maximum cleaning cycle number limit (e.g., a maximum limit placed on the number of cleaning cycles performed). In some embodiments, the maximum cleaning limit may be set by the user. In some embodiments, the maximum cleaning limit may be based on the first sample, the second sample, or the type of processing that is occurring. For example, different samples or different sample processing/analyses may have different maximum cleaning limits. If the maximum cleaning limit is not reached, return to step S51 and continue the cleaning process until the cleaning requirement is met or the maximum cleaning limit is reached. If the maximum cleaning limit is reached, proceed to step S58.
At step S58, the cleaning process is stopped. Optionally, at step S58, a message or warning may be issued to the user, so that the user may take appropriate measures, such as troubleshooting.
In the method 600, once it is found that the cleaning requirement has been met, the monitoring process may be stopped immediately. Therefore, compared with the method 500, the method 600 enables the user to learn the information that the cleaning requirement has been met more quickly.
It should be understood that the method according to the present application is not limited to the above-mentioned methods 500 and 600, but may be changed according to requirements. For example, the method of obtaining the measured value may be changed, and the set parameters may be changed. For example, in step S55 or S65, both the measured value and the calculated value can be used to determine whether the cleaning requirement has been met. Moreover, steps of the method may not necessarily be executed in the described order, but can be interchanged in order or executed at the same time without contradiction. In addition, the method may omit a certain step or add additional steps.
In order to facilitate user operations and obtain information, the method of the present application may be carried out with a user interface. The user interface according to the present application will be described below with reference to
Referring to
As shown in
Hereinafter, the elements of the user interface will be described with reference to specific examples shown in the figures. These examples are for illustrative purposes only, and are not a limitation to the present application.
The menu 810 allows the user to select among the different next-activity elements. For example, the user may select the next-activity element of the “parameter setting” of the menu 810. In response, the parameter setting element 820 may be displayed on the user interface for the user to input. In some examples, the parameter setting element may be shown in the form of an independent window (for example, a pop-up window), which may also be referred to as an operation window or a setting window herein. The parameter setting element may include the settings of cleaning parameters, the settings of monitoring parameters, and the settings of the target carryover amount.
After the user clicks the next-activity element of “setting applicable sample” of the menu 810, a setting-applicable-sample element 830 is displayed on the user interface.
After the user clicks the next-activity element of “run Cleaning/Monitoring” in the menu 810, the cleaning/monitoring process is started according to the settings or selections in
The monitoring element 840 may be shown in one or more windows or modules according to various stages of cleaning/monitoring. The content related to the entire monitoring period may always be displayed on the user interface, and the content related to each stage of cleaning/monitoring may be displayed in separate windows (for example, pop-up windows). It should be understood that the display content and display form of the monitoring element 840 are not limited to the specific examples described herein or shown in the figures, but may be changed. For example, the state of the cleaning/monitoring process may be displayed in a separate state window, or the final result of the monitoring may be displayed in a separate browse window.
It should be understood that the measured actual carryover amount and target carryover amount are not limited to being displayed in texts (as shown in
After the user clicks the next-activity element of “View Monitoring Report” in the menu 810, a report may be displayed on an interface such as the historical data viewing element 850. The historical data viewing element 850 includes historical data that has been monitored.
The user interface described with reference to
Control elements may be displayed in the user interface or various elements, for example, including but not limited to “Switch on”, “Start”, “Stop”, “Interrupt”, “Repeat”, “Close”, “Apply”, “Cancel”, etc., depending on user requirements. The control element may be in the form of one or more control buttons, for example, as shown at the bottom of the windows in
The above system or method may be implemented by the control unit 40. The control unit 40 in the present application may include a processor implemented as a computer or a computing system. The method of operating and cleaning the sample processing instrument and the method of monitoring the cleaning of the sample processing instrument described herein may be implemented by one or more computer programs executed by the processor of the computer. The computer programs include processor-executable instructions stored on a non-transitory tangible computer-readable medium. The computer programs may also include the stored data. Non-limiting examples of the non-transitory tangible computer-readable medium are non-volatile memory, magnetic storage devices, and optical storage devices.
The term computer-readable medium does not include transient electrical or electromagnetic signals that propagate by means of the medium (such as on a carrier); the term computer-readable medium may therefore be considered to be tangible and non-transitory. Non-limiting examples of non-transitory tangible computer-readable medium are non-volatile memory (such as flash memory, erasable programmable read-only memory or mask read-only memory), volatile memory (such as static random access memory circuit or dynamic random access memory), magnetic storage medium (such as analog or digital magnetic tapes or hard drives), and optical storage medium (such as CD, DVD, or Blu-ray Disc).
Although the present application has been described with reference to exemplary embodiments, it should be understood that the present application is not limited to the specific embodiments described and illustrated herein. Without departing from the scope defined by the claims, those skilled in the art can make various changes to the exemplary embodiments. Provided that there is no contradiction, the features in the various embodiments can be combined with each other. Alternatively, a certain feature in the embodiment may also be omitted.
Number | Date | Country | Kind |
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202111223982.7 | Oct 2021 | CN | national |
Filing Document | Filing Date | Country | Kind |
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PCT/CN2022/113006 | 8/17/2022 | WO |