Methods of classifying periorbital dyschromia and systems therefor

Information

  • Patent Grant
  • 10405795
  • Patent Number
    10,405,795
  • Date Filed
    Monday, March 17, 2014
    10 years ago
  • Date Issued
    Tuesday, September 10, 2019
    5 years ago
Abstract
A method and system for classifying different types of periorbital dyschromia is disclosed. The method includes providing at least one of a predetermined imaging characteristic and a biological characteristic for each of three different types of periorbital dyschromia, and then measuring the appropriate characteristic on a person exhibiting periorbital dyschromia. The type of periorbital dyschromia exhibited by a person can then be determined by comparing the measured value to the predetermined value and selecting the corresponding type of periorbital dyschromia.
Description
FIELD OF THE INVENTION

The present application is directed, generally, to methods and systems for classifying periorbital dyschromia on a person. More specifically, the present application discloses methods and systems for classifying different types of periorbital dyschromia based on visual characteristics, histology, the presence, absence and/or abundance of biomarkers and genetic indicators.


BACKGROUND OF THE INVENTION

A person's eyes are a prominent and noticeable facial feature. Thus, any desirable or undesirable aesthetic features associated with the eyes may influence an individual's perception of herself or himself or the impression that the individual makes on others. Undesirable aesthetic features may include lines, wrinkles and discoloration of the skin. For example, some people may find periorbital dyschromia, sometimes referred to as dark circles or under-eye dark circles, to be aesthetically undesirable and/or they may associate the appearance of periorbital dyschromia with fatigue and/or age. It should come as no surprise then that throughout history a variety of ways to accentuate and/or beautify the eyes have been devised. A common approach to improve the appearance of periorbital dyschromia is to use a cosmetic composition such as a concealer or the like to hide the discoloration. Using make up to hide a perceived flaw may provide a temporary cosmetic benefit, but most conventional make up products require daily application and, in some instances, may even require reapplication throughout the day. Thus, a more permanent solution is desired to reduce and/or eliminate some of the undesirable aesthetic features commonly found around the eye.


As mentioned above, a particularly undesirable aesthetic eye feature is periorbital dyschromia. In an effort to find a solution to the problem of periorbital dyschromia, researchers have previously tried to identify its underlying causes. One theory suggests that periorbital dyschromia occurrence is based on the difference between the thickness of the skin in the periorbital region (i.e., the skin around the eye) and the thickness of the skin in other areas of the face such as the cheeks. It is known that the skin surrounding the eyes is typically thinner than other facial skin (e.g., on the order of 0.33 to 0.36 ram or 3 to 5 times thinner than the rest of the skin of the face). As a result, some conventional theories posit that the skin around the eyes may be easily dehydrated and particularly vulnerable to adverse impact of external factors such as heat, stress, tobacco, UV rays, and excessive facial expressions. According to these theories, the skin tissues around the eye area may undergo multiple variations throughout the day, such as vascularization, hydration and turgescence, which contributes to swelling/puffiness and/or the appearance of dark circles under the eyes. While the thinness of the skin in the periorbital region may play a role in the occurrence of periorbital dyschromia, it is not a suitable characteristic for distinguishing different types of periorbital dyschromia. This is because most people generally have thinner skin in the periorbital region compared to other areas of the face, yet not all people have the same type of periorbital dyschromia or, in sonic instances, any periorbital dyschromia at all. Thus, there remains a need to find suitable characteristics for distinguishing different types of dark circles.


Another theory attributes the occurrence of periorbital dyschromia to hyperpigmentation, or the overproduction of melanin in the skin under the eye. But recent studies have revealed that the cause of under-eye dark circles is more often the result of a combination of factors such as deep vascular congestion/superficial vascularity, hyperpigmentation, skin translucency, and structural shadowing, alone or in combination. The belief that a variety of factors are responsible for causing periorbital dyschromia has led to attempts to classify periorbital dyschromia into discrete types according to the different underlying factor(s) believed to be responsible for the discoloration. But these attempts have failed to provide a commercially viable method of classifying periorbital dyschromia or a system that is suitable for developing and marketing cosmetic products that target periorbital dyschromia. In some instances, there were too many classes of periorbital dyschromia, which requires a manufacturer to develop more cosmetic products or line ups and/or market a more complex treatment method. In some instances, the system used to classify the types of periorbital dyschromia may be too complex to allow consumer to self-diagnose, for example, at home or in a commercial environment such as a retail store.


Another theory suggests that chromophores such as melanin and hemoglobin present in the undereye region contribute to the occurrence of periorbital dyschromia. Melanin is a naturally produced pigment in the skin, and hemoglobin is the iron-containing oxygen-transport metalloprotein in the red blood cells of all humans. It is commonly believed that melanin and hemoglobin are primarily responsible for the skin tone of a person. Thus, some recent attempts to classify dark circles have included analyzing relatively small areas of skin on the lower eyelid with a device that correlates certain wavelengths of reflected light into measurements of melanin and/or hemoglobin present in the skin. While this approach may be suitable for providing an indication of the melanin and/or hemoglobin content of the particular area of skin analyzed, it has several drawbacks. For example, the amount of melanin and/or hemoglobin present in the skin or in the blood vessels in under-eye skin can vary based on a wide variety of environment and/or biological influences, which current analytical approaches do not consider. Additionally, current approaches to classifying dark circles based on melanin and hemoglobin levels may not take into account one or more of a variety of other factors believed to contribute to periorbital dyschromia, which are important to include in a robust classification method and/or system suitable for use in commerce. Previous attempts to analyze periorbital dyschromia based on melanin and hemoglobin measurements also focused on the skin of the lower eyelid. Since it is not uncommon for periorbital dyschromia to occur in the periorbital region above the eye and in portions of the undereye region, but not the entire undereye region, it is important to holistically analyze periorbital dyschromia in the periorbital region.


It is currently recognized that periorbital dyschromia is a multifactorial pathogenesis that is not well elucidated. Past attempts to classify periorbital dyschromia may have shown that there are different types of periorbital dyschronia, but they still have failed to provide a suitable method or system of classifying the different types. Further, there is a need for products, product line ups and/or treatment regimens that are particularly suited for treating different types of periorbital dyschromia. For example, some researchers may have recognized that there are different types of periorbital dyschromia, but they still propose treating different types of periorbital dyschromia with the same composition or material. Other researchers have suggested that a “one size fits all” approach to treating periorbital dyschromia may not be suitable, due to the numerous and not well understood differences in the underlying causes of periorbital dyschromia, but they do not proffer a suitable alternative. Thus, there remains a need for a suitable method and system of classifying periorbital dyschromia, and, in particular, one that is more suitable for commercial use. Otherwise, manufacturers may find it too difficult and/or unpredictable to design and market products and treatment regimens for the diverse array of consumers who typically use their products. Similarly, in some instances, it may be desirable for consumers to self-diagnose, and thus it would be desirable for the method and system to be user friendly, for example, in a commercial setting such as a retail store.





BRIEF DESCRIPTION OF THE DRAWINGS

The patent or application file contains at least one drawing executed in color. Copies of this patent or patent application publication with color drawing(s) will be provided by the Office upon request and payment of the necessary fee.



FIG. 1 is an illustration of various portions of a human face.



FIGS. 2A and 2B illustrate examples of the portion of the periorbital region affected by Type I periorbital dyschromia.



FIGS. 3A and 3B illustrate examples of portion of the periorbital region affected by Type II periorbital dyschromia.



FIGS. 4A and 4B illustrate examples of portion of the periorbital region affected by Type III periorbital dyschromia.



FIGS. 5A, 6A and 7A are images of a test subject captured with a digital camera.



FIGS. 5B, 6B and 7B are Brown channel images of a test subject.



FIGS. 5C, 6C and 7C are Red channel images of a test subject.



FIGS. 5D, 6D and 7D illustrate the location of the periorbital dyschromia seen in FIGS. 5B, 6B and 7B, respectively.



FIGS. 5E, 6E and 7E illustrate the location of the periorbital dyschromia seen in FIGS. 5C, 6C and 7C, respectively.



FIG. 8 is a 20× micrograph of a skin tissue sample from a subject exhibiting No Dyschromia.



FIG. 9 is a 20× micrograph of a skin tissue sample from a subject exhibiting Type I periorbital dyschromia.



FIG. 10 is a 20× micrograph of a skin tissue sample from a subject exhibiting Type II periorbital dyschromia.



FIG. 11 is a 20× micrograph of a skin tissue sample from a subject exhibiting Type III periorbital dyschromia.



FIG. 12 illustrates the Fontana-Masson positive bodies observed per field of view for each type of periorbital dyschromia and a No Dyschromia condition.



FIG. 13 illustrates the normalized PTCA amount measured for each type of periorbital dyschromia and a No Dyschromia condition.



FIG. 14 illustrates an example of a masked region corresponding to Zone 1.



FIG. 15 illustrates an example of a masked region corresponding to Zone 2.



FIG. 16 illustrates an example of a masked region corresponding to Zone 4.



FIG. 17 illustrates an example of a masked region corresponding to the cheek.



FIG. 18 illustrates an example of a masked region corresponding to the cheek.



FIG. 19 shows a comparison of the R values for different types of periorbital dyschromia in Zone 1.



FIG. 20 is a comparison of the B values for different types of periorbital dyschromia in Zone 1.



FIG. 21 is a comparison of the G values for different types of periorbital dyschromia in Zone 1.



FIG. 22 is a comparison of the B/G ratios for different types of periorbital dyschromia in Zone 1.



FIG. 23 is a comparison of the R values for different types of periorbital dyschromia in Zone 2.



FIG. 24 is a comparison of the G values for different types of periorbital dyschromia in Zone 2



FIG. 25 is a comparison of the B values for different types of periorbital dyschromia in Zone 2.



FIG. 26 is a comparison of the B/G ratios for different types of periorbital dyschromia in Zone 2.



FIG. 27 is a comparison of the R values for different types of periorbital dyschromia in Zone 4 (i.e., Zones 1 and 2, in combination).



FIG. 28 is a comparison of the G values for different types of periorbital dyschromia in Zone 4 (i.e., Zones 1 and 2, in combination).



FIG. 29 is a comparison of the B values for different types of periorbital dyschromia in Zone 4 (i.e., Zones 1 and 2, in combination).



FIG. 30 is a comparison of the B/G ratios for different types of periorbital dyschromia in Zone 4 (i.e., Zones 1 and 2, in combination).





SUMMARY OF THE INVENTION

In order to provide a solution to the aforementioned problems, disclosed herein is a method of classifying periorbital dyschromia comprising providing a first predetermined imaging value for a first type of periorbital dyschromia, a second predetermined imaging value for a second type of periorbital dyschromia, and a third predetermined imaging value for a third type of periorbital dyschromia. The method includes indentifying skin in a periorbital region of a person comprising periorbital dyschromia and measuring an imaging value of at least a portion of the identified skin. The measured imaging value is compared to the predetermined imaging values, and the person is classified as having the first type of periorbital dyschromia when the measured image value corresponds to the first predetermined imaging value, as having the second type of periorbital dyschromia when the measured imaging value corresponds to the second predetermined imaging value, or as having the third type of periorbital dyschromia when the measured imaging value corresponds to the third predetermined imaging value.


DETAILED DESCRIPTION OF THE INVENTION

All percentages are by weight of the personal-care composition, unless otherwise specified. All ratios are weight ratios, unless specifically stated otherwise. All numeric ranges are inclusive of narrower ranges; delineated upper and lower range limits are interchangeable to create further ranges not explicitly delineated. The number of significant digits conveys neither limitation on the indicated amounts nor on the accuracy of the measurements. All measurements are understood to be made at about 25° C. and at ambient conditions, where “ambient conditions” means conditions under about one atmosphere of pressure and at about 50% relative humidity.


Definitions

“Connectivity map” and “C-map” refer broadly to devices, systems, articles of manufacture, and methodologies for identifying relationships between cellular phenotypes or cosmetic conditions, gene expression, and perturbagens, such as cosmetic actives. A description of connectivity mapping and methods of using connectivity mapping to identify genes and/or compositions of interest can be found in U.S. Publication No. 2012/0283112 titled “Systems and Methods For Identifying Cosmetic Agents For Skin Care Compositions” filed by Binder, et al., on Feb. 22, 2012 and U.S. Publication Nos. 2013/0259816, 2013/0261006, 2013/0261024 and 2013/0261007 all filed by Hakozaki, et al., on Mar. 27, 2013.


“Cosmetic” means providing a desired visual effect on an area of the human body. The visual cosmetic effect may be temporary, semi-permanent or permanent. Some non-limiting examples of “cosmetic products” include products that leave color on the face, such as foundation, mascara, concealers, eye liners, brow colors, eye shadows, blushers, lip sticks, lip balms, face powders, solid emulsion compact, and the like.


“Cosmetic agent” means any substance, as well any component thereof, intended to be rubbed, poured, sprinkled, sprayed, introduced into, or otherwise applied to a mammalian body or any part thereof. Cosmetic agents may include substances that are Generally Recognized as Safe (GRAS) by the US Food and Drug Administration, food additives, and materials used in non-cosmetic consumer products including over-the-counter medications. In some embodiments, cosmetic agents may be incorporated in a cosmetic composition comprising a dermatologically acceptable carrier suitable for topical application to skin. A cosmetic agent includes, but is not limited to, (i) chemicals, compounds, small or large molecules, extracts, formulations, or combinations thereof that are known to induce or cause at least one effect (positive or negative) on skin tissue; (ii) chemicals, compounds, small molecules, extracts, formulations, or combinations thereof that are known to induce or cause at least one effect (positive or negative) on skin tissue and are discovered, using the provided methods and systems, to induce or cause at least one previously unknown effect (positive or negative) on the skin tissue; and (iii) chemicals, compounds, small molecules, extracts, formulations, or combinations thereof that are not known have an effect on skin tissue and are discovered, using the provided methods and systems, to induce or cause an effect on skin tissue.


Some examples of cosmetic agents or cosmetically actionable materials can be found in: the PubChem database associated with the National Institutes of Health, USA; the Ingredient Database of the Personal Care Products Council; and the 2010 International Cosmetic Ingredient Dictionary and Handbook, 13th Edition, published by The Personal Care Products Council; the EU Cosmetic Ingredients and Substances list; the Japan Cosmetic Ingredients List; the Personal Care Products Council, the SkinDeep database; the FDA Approved Excipients List; the FDA OTC List; the Japan Quasi Drug List; the US FDA Everything Added to Food database; EU Food Additive list; Japan Existing Food Additives, Flavor GRAS list; US FDA Select Committee on GRAS Substances; US Household Products Database; the Global New Products Database (GNPD) Personal Care, Health Care, Food/Drink/Pet and Household database; and from suppliers of cosmetic ingredients and botanicals.


Other non-limiting examples of cosmetic agents include botanicals (which may be derived from one or more of a root, stem bark, leaf, seed or fruit of a plant). Some botanicals may be extracted from a plant biomass (e.g., root, stem, bark, leaf, etc.) using one more solvents. Botanicals may comprise a complex mixture of compounds and lack a distinct active ingredient. Another category of cosmetic agents are vitamin compounds and derivatives and combinations thereof, such as a vitamin B3 compound, a vitamin B5 compound, a vitamin B6 compound, a vitamin B9 compound, a vitamin A compound, a vitamin C compound, a vitamin E compound, and derivatives and combinations thereof (e.g., retinol, retinyl esters, niacinamide, folic acid, panthenol, ascorbic acid, tocopherol, and tocopherol acetate). Other non-limiting examples of cosmetic agents include sugar amines, phytosterols, hexamidine, hydroxy acids, ceramides, amino acids, and polyols.


“Data architecture” refers generally to one or more digital data structures comprising an organized collection of data. In some embodiments, the digital data structures can be stored as a digital file (e.g., a spreadsheet file, a text file, a word processing file, a database file, etc.) on a computer readable medium. In some embodiments, the data architecture is provided in the form of a database that may be managed by a database management system (DBMS) that is be used to access, organize, and select data (e.g., instances and gene expression signatures) stored in a database.


“Disposed” refers to an element being located in a particular place or position relative to another element.


“Effective amount” means an amount of a compound or composition sufficient to significantly induce a positive or desired benefit, (e.g., a positive skin or feel benefit, reverse the expression of a gene, group of genes and/or gene signature), including independently or in combinations the benefits disclosed herein, but low enough to avoid serious side effects, i.e., to provide a reasonable benefit to risk ratio, within the scope of sound judgment of the skilled artisan.


“Gene expression signature” refers to a rationally derived list, or plurality of lists, of genes representative of a skin tissue condition or a skin agent. In specific contexts, the skin agent may be a benchmark skin agent or a potential skin agent. Thus, the gene expression signature may serve as a proxy for a phenotype of interest for skin tissue. A gene expression signature may comprise genes whose expression, relative to a normal or control state, is increased (up-regulated), whose expression is decreased (down-regulated), and combinations thereof. Generally, a gene expression signature for a modified cellular phenotype may be described as a set of genes differentially expressed in the modified cellular phenotype over the unmodified cellular phenotype. A gene expression signature can be derived from various sources of data, including but not limited to, from in vitro testing, in vivo testing and combinations thereof. In some embodiments, a gene expression signature may comprise a first list representative of a plurality of up-regulated genes of the condition of interest and a second list representative of a plurality of down-regulated genes of the condition of interest.


“Gene expression profiling” refers to the measurement of the expression of multiple genes in a biological sample using any suitable profiling technology. For example, the mRNA expression of thousands of genes may be determined using microarray techniques. Other emerging technologies that may be used include RNA-Seq or whole transcriptome sequencing using NextGen sequencing techniques. Gene expression profiling may be used to generate a gene expression signature.


“Joined” means configurations whereby an element is directly secured to another element by affixing the element directly to the other element, and configurations whereby an element is indirectly secured to another element by affixing the element to intermediate member(s) that in turn are affixed to the other element.


“Keratinous tissue,” means keratin-containing tissue layers disposed as the outermost protective covering of mammals which includes, but is not limited to, skin, hair, and nails.’


“Lateral” means a direction that is generally perpendicular to an imaginary centerline that bisects the human body into right and left mirror images. Directions that are within forty-five degrees of being perpendicular to the imaginary centerline are considered lateral.


“Longitudinal” means a direction that is generally parallel to an imaginary centerline that Bisects the human body into right and left mirror images. Directions that are within forty-five degrees of being parallel to the imaginary centerline are considered longitudinal.


“Microarray” refers broadly to any ordered array of nucleic acids, oligonucleotides, proteins, small molecules, large molecules, and/or combinations thereof on a substrate that enables gene expression profiling of a biological sample. Non-limiting examples of microarrays are available from Affymetrix, Inc.; Agilent Technologies, Inc.; Illumina, Inc.; GE Healthcare, Inc.; Applied Biosystems, Inc.; Beckman Coulter, Inc.; etc.


“Periorbital” means around the orbit of the eye. The periorbital region of a person is the area of the face generally disposed around the eye socket and typically lies between the bottom of the brow and the top of the cheek in the longitudinal direction and between the bridge of the nose and the temple in the lateral direction.


“Periorbital dyschromia” is a condition that occurs when the tone of skin in the periorbital region of person is noticeably different from the tone of skin in a nearby portion of the face, such as the cheek, nose, forehead, temple and/or another portion of the periorbital region. Perioribital dyschromia is bilateral, (i.e., it occurs in the periorbital region of both sides of the face). Periorbital dyschromia may appear as a result of hyperpigmented and/or hypopigmented skin disposed in the periorbital region. Periorbital dyschromia may be identified and/or classified according to one or more of the indicators described in more detail below. Periorbital dyschromia herein is classified into one of three types (i.e., Type I, Type II or Type III). The three types of periorbital dyschromia are described and defined in more detail below, and can be readily determined in accordance with the methods herein.


“Personal care composition” means a cosmetic composition or a skin care composition suitable. Is it to be appreciated that a personal care composition may provide both a cosmetic benefit and a skin health benefit,


“Reverse,” when referring to the gene expression of a gene, means that the expression of the gene is changed such that it is opposite of the expression indicated in a gene signature in a significant way (e.g., p-value <0.1, p-value <0.05, p-value <0.01, p-value <0.001, or p-value <0.0001 as determined by a statistical test like ANOVA or to a t-test). For example, if a gene expression signature indicates that a particular gene is up-regulated, then reversing the expression of the gene can mean that the gene is down-regulated relative to the indicated gene expression signature with a p-value of less than 0.05 as determined by a statistical test like ANOVA or t-test. When referring to gene expression signatures, the term “reversing” depends on the method used to determine the change in gene expression signature. For example, when using connectivity mapping, a connectivity score is generated to represent an amount of differential expression relative to a known gene expression signature, e.g., stored in a data architecture, and the connectivity score can be used as a measure of the amount of reversal in a gene expression signature in a significant way (e.g., p-value <0.1, p-value <0.05, p-value <0.01, p-value <0.001, or p-value <0.0001.


“Skin” means the outermost protective covering of mammals that is composed of cells such as keratinocytes, fibroblasts and melanocytes. Skin includes an outer epidermal layer and an underlying dermal layer. Skin may also include hair and nails as well as other types of cells commonly associated with skin, such as, for example, myocytes, Merkel cells, Langerhans cells, macrophages, stem cells, sebocytes, nerve cells and adipocytes.


“Skin care” means regulating and/or improving skin condition. Some nonlimiting examples of skin care benefits include improving skin appearance and/or feel by providing a smoother, more even appearance and/or feel; increasing the thickness of one or more layers of the skin; improving the elasticity or resiliency of the skin; improving the firmness of the skin; and reducing the oily, shiny, and/or dull appearance of skin, improving the hydration status or moisturization of the skin, improving the appearance of fine lines and/or wrinkles, improving skin texture or smoothness, improving skin exfoliation or desquamation, plumping the skin, improving skin barrier properties, improve skin tone, reducing the appearance of redness or skin blotches, and/or improving the brightness, radiancy, or translucency of skin. Some nonlimiting examples of “skin care products” include skin creams, moisturizers, lotions, and body washes.


“Skin-care active” means a compound or combination of compounds that, when applied to skin, provide an acute and/or chronic benefit to skin or a type of cell commonly found therein. Skin-care actives may regulate and/or improve skin or its associated cells (e.g., improve skin elasticity; improve skin hydration; improve skin condition; and improve cell metabolism).


“Skin-care composition” means a composition that regulates and/or improves skin condition.


“Skin tone” refers to the perceived color or pigmentation of skin, especially with regard to the evenness of the coloration or pigmentation. “Skin tone” may also include other characteristics of skin that contribute to a consumer perception of overall tone. For example, pore size and distribution, and skin texture may also be considered attributes of overall skin tone.


“Software” and “software application” mean one or more computer readable and/or executable instructions that cause a computing device or other electronic device to perform functions, actions, and/or behave in a desired manner. The instructions may be embodied in one or more various forms like routines, algorithms, modules, libraries, methods, and/or programs. Software may be implemented in a variety of executable and/or loadable forms and can be located in one computer component and/or distributed between two or more communicating, co-operating, and/or parallel processing computer components and thus can be loaded and/or executed in serial, parallel, and other manners. Software can be stored on one or more computer readable medium and may implement, in whole or part, the methods and functionalities of the present invention.


“Topical application” means to apply or spread the compositions of the present invention onto the surface of the keratinous tissue.


Before now, the underlying causes of periorbital dyschromia were not particularly well elucidated. However, it has unexpectedly been found that there are common themes associated with periorbital dyschromia that can lend themselves to differentiation based on a variety of relatively straightforward evaluation techniques. Previous attempts to classify periorbital dyschromia did not appreciate that periorbital dyschromia can be grouped into distinct categories based on the visual evaluation, imaging, biomarker, histology, and/or genetic analysis techniques disclosed herein. Based on these newly discovered distinctions, it is believed that the methods and systems described herein, individually and/or collectively, may enable the development and/or marketing of improved cosmetic products and/or treatment regimens particularly suited for treating different types of periorbital dyschromia.


Visual Evaluation


Periorbital dyschromia may be classified into three different types as well as a “No Dyschromia” condition using visual evaluation techniques. In particular, the location and/or tone(s) of a dyschromic portion of periorbital skin may be analyzed visually to determine whether perirorbital dyschromia is present and, if present, which type is present. For example, a No Dyschromia condition may be visually characterized by the lack of an uneven or discontinuous skin tone in the periorbital region. Visual evaluation may be done by an expert grader (i.e., someone trained to visually classify periorbital dyschromia), for example, as described in more detail in the Methods section below, or the visual classification may be done by a non-expert (e.g., a consumer who self-diagnoses) based on, for example, a set of instructions or a visual cue.



FIG. 1 illustrates the periorbital region 10 of a human face 5 divided into three zones. Zone 111 is disposed generally under the eye in the longitudinal direction (represented by the arrow Y) and extends under the eye in the lateral direction (represented by the arrow X) from the inner canthus 4 (i.e., the corner of the eye proximate the nose 20) to an area under the eye that is less than the complete distance to the outer canthus 6 (i.e., the corner of the eye spaced furthest from the nose). For example, as illustrated in FIG. 1, Zone 111 may extend from the inner canthus 4 to about the middle of the undereye portion of the periorbital region 10. But it is to be appreciated that, in some individuals, Zone 1 may extend more than halfway or less than halfway across the under-eye region, but typically not more than 90% of the distance from the inner canthus 4 to the outer canthus 6. Zone 212 extends from the distal edge of Zone 111 (i.e., the portion of Zone 1 furthest from the nose 20 in the lateral direction) to the outer canthus 6 of the eye. Zone 3 is disposed above the eye and extends laterally from the inner canthus 4 to the outer canthus 6. Zone 313 also extends generally in the longitudinal direction Y from the upper eyelid to the bottom of the eyebrow. In some embodiments, it may be desirable to use a target portion of skin disposed on the cheek 7 as a reference or control when evaluating the location and/or tones of periorbital dyschromia.


“Type I” periorbital dyschromia may be visually characterized by continuous discoloration of both the upper and lower eyelid skin. The dyschromic periorbital skin associated with Type I periorbital dyschromia typically includes substantially uniform brown, yellow and/or orange tones, which may resemble the color of tanned skin or an age spot. Additionally or alternatively, Type I periorbital dyschromia may be visually characterized by being generally present in Zones 1, 2 and 3 of the periorbital region of a person.


“Type II” may be visually characterized by continuous discoloration of the lower eyelid skin. The discolored periorbital skin associated with Type II periorbital dyschromia typically includes substantially uniform purple, pink and/or bluish tones, which may resemble bruised skin. Additionally or alternatively, Type II periorbital dyschromia may be visually characterized by being generally present in Zone 1 of the periorbital region and generally absent from Zone 2 and Zone 3.


“Type III periorbital dyschromia” typically includes a combination of characteristics of Types I and II, such as color and location in the periorbital region. In some instances, Type III perioribital dyschromia may be characterized by discontinuous discoloration of the undereye portion of the periorbital region, which is different from the more uniform discoloration associated with Types I and II. The patches of discolored periorbital skin associated with Type III periorbital dyschromia are generally present in Zone 1 and Zone 2 and may also be present in the inner portion of Zone 3 (i.e., the portion of Zone 3 that is closest to the nose).



FIGS. 2A and 2B illustrate examples of Type I periorbital dyschromia, which is represented by the shaded portions 200 and 201, respectively, of the periorbital region. FIGS. 3A and 3B illustrate examples of Type II periorbital dyschromia (i.e., the shaded portions 300 and 301, respectively, of the periorbital region). FIGS. 4A and 4B illustrate examples of Type III periorbital dyschromia (i.e., the shaded portions 400 and 401, respectively, of the periorbital region).


Imaging Classification—RGB


Type I, Type II and Type III periorbital dyschromia may be distinguished from one another using known imaging technique such as RGB and/or RBX® color imaging and/or gray scale imaging. An image of the region of interest (“ROI”) (e.g., periorbital region of a person) is captured by an image capture device, and at least a portion of the image is analyzed (e.g., by a computer) and assigned an imaging value based on the analysis. This determined imaging value may then be compared to a predetermined imaging value, which can be a single value or a range of values (e.g., one or more of the RGB values disclosed herein). The predetermined imaging value defines a particular type of periorbital dyschromia, and the comparison enables a user to identify which type of periorbital dyschromia, if any, is exhibited by the person. For example, RGB color imaging uses an additive color model wherein red, green, and blue light are added together in various ways to reproduce a broad array of colors. The RGB color model is particularly suited for sensing, representing, and displaying images in electronic systems such as televisions and computers. RGB is a device-dependent color model, which means that different devices may detect or reproduce a given RGB value differently, since the color elements (such as phosphors or dyes) and their response to the individual R, G, and B levels may vary from manufacturer to manufacturer, or even in the same device over time. Thus, it can be important to use color correction to ensure that an RGB value defines the same color across devices or in the same device over time. Color correction can be readily accomplished by one skilled in the art using commercially available software and techniques.


Classifying periorbital dyschromia according to the imaging classification methods and systems described herein depends on, among other things, the skin tone of an individual. For example, people who are Fitzpatrick I, II and III skin types according to the commonly known Fitzpatrick Scale, may have different color values associated with the different types of periorbital dyschromia as compared to people who are Fitzpatrick skin type IV, V or VI. In some of the examples and descriptions below, the different types of periorbital dyschromia are in relation to people who are Fitzpatrick skin type I, II and/or III (e.g., the imaging values and ratios). However, it is believed, without being limited by theory, that the classification methods and systems herein can be reapplied to people with Fitzpatrick IV, V and VI skin types in the substantially the same manner. In some instances, it may be desirable to normalize the imaging values of one or more zones in the periorbital region to a reference or control value such as an imaging value associated with the cheek. The normalized value may then be used to determine whether periorbital dyschromia is present and, if so, which type.


Type I periorbital dyschromia may be characterized by generally having lower RGB values relative to Types II and III as well as a different ratio of B value to G value (“B/G”). Type II periorbital dyschromia may be characterized by generally having higher RGB values compared to Types I and III. Type III periorbital dyschromia may include characteristics of both Type I and Type II. Tables 1, 2 and 3 below show ranges of color corrected RGB values, B/G ratios, L*a*b* values, chroma values and hue values that may be used to characterize Type I, Type II and Type III periorbital dyschromia, respectively, exhibited by a person having a Fitzpatrick skin type of I, II or III. The values provided in Tables 1, 2 and 3 correspond to a particular portion of the periorbital region referred to as a “mask.” Masks, and in particular Mask A, Mask B and Mask C are described in more detail below in the Imaging Method, which provides a suitable method of determining imaging values.









TABLE 1







Type I












Imaging Value
Mask A
Mask B
Mask C







R
118-166
135-187
128-178



G
 83-119
 94-136
 89-129



B
 76-108
 81-112
 79-112



B/G
0.75-0.92
0.73-0.86
0.74-0.89



L
48-54
43-61
41-59



A
13-18
 9-17
12-18



b
 9-23
14-25
12-23



Hue (h)
35-53
42-60
39-56



Chroma (C)
16-28
17-28
17-28

















TABLE 2







Type II












Imaging Value
Mask A
Mask B
Mask C







R
148-176
165-201
159-186



G
102-135
128-160
115-148



B
 96-128
108-145
103-136



B/G
0.86-0.98
0.82-0.93
0.84-0.94



L
48-60
57-69
52-64



a
11-20
 9-19
10-19



b
 7-16
10-20
 9-17



Hue (h)
24-54
33-61
32-57



Chroma (C)
15-23
15-22
15-22

















TABLE 3







Type III












Imaging Value
Mask A
Mask B
Mask C







R
142-172
160-188
153-177



G
 97-129
110-148
105-137



B
 88-114
 92-129
 90-119



B/G
0.81-0.95
0.79-0.89
0.80-0.92



L
46-57
51-64
49-60



a
11-20
10-17
11-18



b
 9-19
13-21
11-19



Hue (h)
29-54
42-62
36-57



Chroma (C)
17-24
18-24
18-24











Imaging Classification—RBX


Attempts have been made in the past to classify periorbital dyschromia based on melanin and/or hemoglobin content, which are believed to be the chromophores primarily responsible for skin tone. For example, some previous attempts used conventional instruments (e.g., Mexameter MX-18) to measure the amount of melanin and hemoglobin in the skin. The measured values are then compared to the different types of periorbital dyschromia observed in test subjects to identify any correlations that might be used in classifying the different types of periorbital dyschromia. However, these past attempts concluded that measuring melanin and hemoglobin in this manner does not provide a useful tool for differentiating periorbital dyschromia.


In contrast with previous findings, it has been found that certain imaging technology such as RBX® brand imaging technology, available from Canfield Scientific, Inc., New Jersey, may provide a suitable distinction between Type I, Type II and Type III periorbital dyschromia, based on differences in the Red Channel and Brown channel images, which can correspond to the melanin and hemoglobin present in the skin. This is an unexpected finding, since previous studies have concluded that using imaging systems to measure colorants or chomophores in the skin does not provide a suitable means for classifying periorbital dyschromia.


RBX® brand imaging technology is based on the premise that skin color is characterized by a limited number of colorants, or chromophores, within the layers of skin. In normal, healthy skin, melanin particles, which are primarily responsible for the overall skin color, are small and uniformly distributed resulting in a smooth, even skin tone. Hemoglobin occurs within the vascular structure at the papillary dermis, a sub-layer of skin, in oxygenated and deoxygenated forms and is responsible for red colorations of skin tone. However, it may not be desirable to quantify skin pigmentation by only measuring the total attenuation of broadband light because, apart from melanin, hemoglobin in skin also absorbs visible light in a wavelength dependent manner. Therefore, methods are required to measure light absorbance in more than one spectral band. RBX® brand imaging technology transforms a conventional RGB image (e.g., captured by a conventional digital camera) into a color space where the Red and Brown channels represent hemoglobin and melanin distribution, respectively.


In some instances, Type I periorbital dyschromia may be characterized by relatively high Brown and Red channel contrast in the periorbital region as compared to other portions of the face (e.g., cheek, chin, nose or forehead). FIGS. 5A to 5E illustrate an example of Type I periorbital dyschromia observed in an RBX® image. FIG. 5A is a full color image of a test subject captured with a digital camera. As can be seen in FIG. 5A, periorbital dyschromia appears in Zones I, II and III of the periorbital region of the test subject. FIG. 5B shows the Brown Channel image that corresponds to the digital image of FIG. 5A. FIG. 5C shows the Red Channel image that corresponds to the digital image from FIG. 5A. FIG. 5D provides an illustration of the location of the periorbital dyschromia provided in FIG. 5B (i.e., in the Brown channel), and FIG. 5E provides an illustration of the location of the periorbital dyschromia provided in FIG. 5C (i.e., the Red Channel). As can be seen in FIG. 5C, and as illustrated in FIG. 5E, periorbital dyschromia is present in Zones 1 and 2 and in a portion of Zone 3. However, the periorbital dyschromia appearing in Zone 3 of FIG. 5C is not present in as large an area as the periorbital dyschromia in Zone 3 of FIG. 5B. This may suggest that melanin and hemoglobin both influence the appearance of Type I periorbital dyschromia, but melanin is the more abundant chromophore. FIG. 5E provides an illustration of the periorbital dyschromia that appears in FIG. 5C (i.e., in the Red Channel).


Type II periorbital dyschromia may be characterized by relatively low Brown Channel intensity values in the periorbital skin relative to the surrounding areas of face (e.g., cheek and forehead) and high Red Channel contrast in the periorbital region as compared to other portions of the face. FIGS. 6A to 6E illustrate an example of Type II periorbital dyschromia observed in an RBX®. FIG. 6A is an image of a subject captured with a digital camera. As can be seen in FIG. 6A, periorbital dyschromia appears in Zone 1, but appears to be substantially absent from Zones 2 and 3. FIG. 6B shows the Brown channel image that corresponds to the digital image of FIG. 6A. FIG. 6C shows the Red Channel image that corresponds to the digital image of FIG. 6A. FIG. 6D provides an illustration of the location of the periorbital dyschromia provided in FIG. 6B (i.e., in the Brown channel), and FIG. 6E provides an illustration of the location of the periorbital dyschromia provided in FIG. 6C (i.e., the Red Channel). As can be seen in FIG. 6C, and as illustrated in FIG. 6E, periorbital dyschromia is visible in Zone 1, but appears to be substantially absent from Zones 2 and 3. This may suggest that melanin does not play as significant a role as hemoglobin in Type II periorbital dyschromia.


Type III periorbital dyschromia may be characterized by discontinuous patches of Brown Channel and Red channel intensity in the periorbital region. FIGS. 7A to 7E illustrate an example of Type III periorbital dyschromia observed in an RBX® image. FIG. 7A is an image of a test subject captured with a digital camera. As can be seen in FIG. 7A, periorbital dyschromia appears in Zones 1 and 3, but appears to be substantially absent from Zone 2. FIG. 7B shows the Brown channel image that corresponds to the digital image from FIG. 7A. FIG. 7C shows the Red channel image that corresponds to the digital image from FIG. 7A. FIG. 7D provides an illustration of the location of the periorbital dyschromia provided in FIG. 7B (i.e., in the Brown channel), and FIG. 7E provides an illustration of the location of the periorbital dyschromia provided in FIG. 7C (i.e., the Red Channel). As can be seen in FIG. 7B, and as illustrated in FIG. 7D, periorbital dyschromia appears in Zones 1 and 3 of the periorbital region of the test subject. And as can be seen in FIG. 7C, and as illustrated in FIG. 7E, periorbital dyschromia appears in Zone 1, but appears to be substantially absent from Zones 2 and 3.


Histology


Type I, Type II and Type III periorbital dyschromia may be distinguished from one another using histological evaluation techniques that include, for example, sectioning and staining, followed by examination under a microscope (e.g., light or electron). In particular, it has been found that the abundance and/or location of certain cellular structures (e.g., melanin) within skin biopsy samples obtained from a discolored area of periorbital skin may be used to distinguish Type I, Type II and Type III periorbital dyschromia from one another. Skin tissue samples for use herein may be obtained, sectioned and/or stained according to any suitable method in the art. The Biopsy Method described in more detail below is an example of a suitable method of sample collection, sectioning and staining. Examples of conventional stains suitable for use herein include hematoxylin and eosin stain (“H&E stain”) and Fontana-Masson stain. H&E stain is a known for use in histology and involves the application of hemalum, which is a complex formed from aluminum ions and oxidized haematoxylin, to a tissue sample. The application of hemalum colors the nuclei of the cells in the sample dark blue or purple. The nuclear staining is followed by counterstaining with an aqueous or alcoholic solution of eosin Y, which colors eosinophilic structures such as cytoplasm in various shades of red, pink and orange. Fontana-Masson stain uses ammoniacal silver nitrate to detect cellular structures in a tissue sample that are capable of reducing the silver nitrate to metallic silver, which stains the structure black.



FIGS. 8 to 11 are micrograph images at 20× magnification of H&E-stained biopsy samples from skin disposed in the periorbital region of human test subjects. The samples were collected, sectioned and stained according to the Biopsy Method described in more detail below. Each test subject was classified as exhibiting Type I, Type II, Type III or No Dyschromia by an expert grader. The skin tissue sample shown in FIG. 8 is from a test subject classified as exhibiting No Dyschromia, and thus may serve as a suitable control. The dark (i.e., purple) bodies shown in FIG. 8 are nuclei of the various cells commonly disposed in the dermis and epidermis of an individual. The lighter (i.e., red/pink) stained areas between the nuclei corresponds to cytoplasm, connective tissue and glycoproteins.


The skin tissue sample shown in FIG. 9 is from a test subject classified as exhibiting Type I periorbital dyschromia. The white arrowheads shown in FIG. 9 point to deposits, which are brown in color when seen in a color micrograph, disposed around the nuclei of some of the cells in the sample. When the tissue samples are stained with Fontana-Masson stain, the deposits appear black (“Fontana-Masson positive deposits”), which indicates that they may be melanin. This is surprising because melanin is generally not associated with the dermis and is more commonly found in the epidermis. As can be seen in FIG. 9, the Fontana-Masson positive deposits are generally disposed around the nuclei of cells that appear to be clustered together underneath the epidermal-dermal junction. The clustered cells are believed to be fibroblasts, which account for the majority of cells typically found in a healthy dermis. Healthy fibroblasts generally appear as elongated, flat cells, but the clustered cells in FIG. 9 are round when viewed under a light microscope, which indicates that they may not be healthy fibroblasts. Thus, it is believed, without being limited by theory, that the presence of these melanin deposits in the dermis may be related to an underlying biological cause of Type I perioribital dyschromia. In particular, the round clustered appearance of the fibroblasts may be associated with an inflammation response. In view of this discovery, it may be desirable to provide a method and system of classifying periorbital dyschromia based, at least in part, on dermal melanin content. It may also be desirable to configure products and regimens suited for treating Type I periorbital dyschromia to address the presence of melanin in the dermis and/or the factors that may influence the presence of melanin in the dermis.


In addition to the discovery of unexpected amounts of Fontana-Masson positive deposits in the dermis, there also appeared to be an overabundance of melanin in the epidermis of periorbital skin tissue samples taken from Type I individuals. Thus, it may be desirable to tailor products for treating Type I periorbital dyschromia to include a cosmetic active that addresses the presence of excess melanin in the epidermis.


The skin tissue sample shown in FIG. 10 is a sample from a test subject classified as exhibiting Type II periorbital dyschromia. The Fontana-Masson positive deposits that can be seen in the dermis of the Type I sample of FIG. 9 are absent from the dermis of the Type II sample in FIG. 10. Thus, the underlying biological causes of Type I and Type II periorbital dyschromia may be different from one another, which is important since products and treatments suitable for one type of periorbital dyschromia may not suitable for another type. In particular, products and treatments for Type II periorbital dyschromia may not need to address the presence of melanin in the dermis.


Examination of the skin tissue samples taken from Type II individuals also showed a lack of melanin in the epidermis. Thus, it is also important to recognize that periorbital dyschromia may be influenced not only by hyperpigmentation (i.e., too much pigmentation), as suggested by some researchers, but surprisingly appears to be influenced by hypopigmentation (i.e., not enough pigmentation) as well.


The skin tissue sample shown in FIG. 11 is a sample obtained from a test subject classified as exhibiting Type III periorbital dyschromia. As indicated by the white arrowheads in FIG. 11, there are Fontana-Masson positive deposits present around the nuclei of some cells in the dermis, but not as many as seen in the Type I sample shown in FIG. 9. It is believed, without being limited by theory, that Type III periorbital dyschromia may occur as a result of one or more factors from Type I and Type II periorbital dyschromia acting to produce periorbital dyschromia that exhibits at least some of the characteristics of both of these types. For example, the unexpected presence of melanin in the dermis may indicate that Type III periorbital dyschromia shares a common underlying cause with Type I, but less severe as evidenced by a lower amount of dermal melanin relative to Type I. Thus, products and treatments suitable for treating Type III periorbital dyschromia may need to address the underlying causes of Type I and/or Type II periorbital dyschromia, but perhaps not to the same extent. For example, a product suitable for treating Type I periorbital dyschromia that includes an active for addressing the presence of melanin in the dermis may not need to include as much of the active.


Biomarker


Type I, Type II and Type III periorbital dyschromia may be distinguished from one another by collecting and analyzing the biomarkers present in periorbital skin. In particular, it has been found that the presence, absence and/or abundance of certain molecules in the epidermis of periorbital skin can be useful in distinguishing Type I, Type II and Type III periorbital dyschromia from one another. An example of such a molecule is pyrrole-2,3,5-tricarboxylic acid (“PTCA”), which is formed as a result oxidative degradation of eumelanin. It has been found that Type I and Type III periorbital dyschromia have higher PTCA levels than Type II, and that Type I may exhibit higher PTCA levels than Type III. FIG. 13 illustrates the comparison between PTCA levels of samples obtained from a subject classified as No Dyschromia 382, a subject who classified as Type I periorbital dyschromia 384, 2) a subject classified as Type II periorbital dyschromia 386, and 3) a test subject classified as Type III periorbital dyschromia 388. As illustrated in the chart 550 of FIG. 13, the PTCA levels of the Type I 384 and Type III 388 subjects was higher than the No Dyschromia 382 and the Type II subject 386 by a statistically significant amount. In contrast, the PTCA level of the Type II subject 386 was not higher than the No Dyschromia 382 by a statistically significant amount. PTCA levels herein are determined according to the Tape Stripping method described in more detail below.


Gene Expression


Type I, Type II and Type III periorbital dyschromia may be distinguished from one another by analyzing the expression of certain genes, individually or collectively, in the dermis and/or epidermis of periorbital skin. The gene expression signature of a periorbital skin sample may be obtained by any suitable means known in the art. For example, genetic material may be obtained from a tissue sample provide by a donor (e.g., full thickness skin biopsy that exhibits a condition of interest) and subsequently processed using any suitable technology such as, for example, microarray analysis or NextGen sequencing to provide a gene expression signature. The gene expression signatures of Type I, Type II and Type III periorbital dyschromia can then be compared to one another and/or a control to identify the differences in gene expression. Example 4 below provides an example of gene expression signatures associated with each of Type I, Type II and Type III periorbital dyschromia.


It may be desirable to distinguish the different types of periorbital dyschromia based on biological themes that correspond to the expression of certain genes, combinations of genes and/or gene families. That is, a technique sometimes referred to as theme analysis may be used to identify biological or phenotypic themes associated with the gene expression data that correspond to the different types of periorbital dyschromia. Theme analysis is a statistical analysis-based method for detecting biological patterns in gene expression data. The method uses an ontology of controlled vocabulary terms developed by the Gene Ontology (“GO”) Consortium [Ashburner, M. et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet, 25, 25-29] that describe the biological processes, molecular functions and cellular components associated with gene products. Analysis involves statistical comparison of a regulated list of genes and a larger reference list of all the expressed genes, to determine if genes annotated to specific GO terms are significantly enriched in the regulated list. This analysis may reveal biological patterns when multiple genes associated with a given GO term occur on the regulated list at a frequency greater than expected by chance. Such analysis may be performed using Theme Extractor proprietary software and an algorithm that calculates a p-value of each ontology term. Data may be analyzed for statistical significance, for example, by the Fisher's Exact Test. Conventional approaches and statistical methods such as, for example, Gene Set Enrichment Analysis described by Subramanian, A., et al., in “Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles,” Proc. Natl. Acad Sci U.S.A, 102, 15545-155501 (2005) are suitable for conducting theme analysis herein.


Methods and Systems for Classifying Periorbital Discoloration


In some instances, the method herein includes indentifying a target portion of skin in the periorbital region of a person, evaluating the target skin portion based on the relevant characteristics described herein and classifying the person as having Type I, Type II or Type III periorbital dyschromia, if one or more characteristics associated with the relevant type of periorbital dyschromia are met. In some instances, the method may include classifying the type of periorbital dyschromia based solely on one of the foregoing distinguishing characteristics (i.e., visual characteristics such as RGB and/or RBX values, biomarkers, histology or gene expression). In some instances, the method includes classifying periorbital dyschromia based on a combination of two or more of the foregoing characteristics (e.g., visual and gene expression characteristics, visual and biomarker characteristics, or visual and histology characteristics).


Systems suitable for classifying periorbital discoloration herein may include an image capture device, an image analysis device, a means for communicating a type of periorbital dyschromia to a user of the system and, optionally, a set of instructions for using the system. The type of periorbital dyschromia may be selected from Type I, Type II and Type III as described herein. A user may also be classified as having No Dyschromia with the present system. The system may include a camera or similar device capable of capturing digital images of sufficient quality (e.g., greater than 8 megapixels per inch) for analysis by the image analysis device. The image capture device may be configured to store and/or transfer raw digital images and JPG digital image files. In some instances, the image analysis device may be a computer in electronic communication with the image capture device. The image analysis device should be capable of receiving and analyzing a raw digital image and/or a JPG image and converting the RGB color values of each pixel in the image to a more suitable color scale such as L*a*b* and, optionally, color and/or hue values (e.g., C* and h* values). Suitable image processing software (e.g., stored directly on the image analysis device or available for use or on the internal may be used by the image analysis device to process and/or analyze various aspects of the image. In some instances, it may be desirable to normalize the pixel colors of the image analysis system to reduce variation between images captured by different devices (e.g., using known color correction techniques and/or software). An exemplary method of normalizing an image analysis device is described in more detail below. Of course, it is to be appreciated that other suitable normalization techniques known in the art may be used.


The image analysis system may be configured to classify each pixel (or a predetermined number of pixels) into one of three groups (e.g., Type I, Type II and No Dyschromia) based on the color of the pixel. The image analysis system may then calculate the percent total number of pixels in each classification and determine which type of periorbital dyschromia is present or whether any periorbital dyschromia is present, based on the percentage of pixel types from each group. After determining the type of periorbital dyschromia present, if any, the system communicates the results of the analysis to the user, for example, visually via a monitor or television, audibly via a speaker or by any other suitable communication means known in the art.


In some embodiments, it may be desirable to place the system in a commercial environment such as a retail store to enable consumers to self-diagnose. In this way, a consumer would know which type of periorbital discoloration they might have and can select the appropriate cosmetic product to treat it.


Test Methods

Visual Classification Method


This method provides a suitable means to visually evaluate and classify periorbital dyschromia using expert graders. The visual evaluation can be done in-person as well as from images (e.g., cross-polarized images).


In-Person Grading


Prior to visual evaluation, the subjects are asked to wash their face and remove any make-up, especially eye make-up. The hair of the subject is covered with a hairnet and the head and shoulders of the subject are covered with black cloth. The subjects are asked to sit between two sets of lights that illuminate each side of their face without casting shadows or causing shine in the area of the eye. The expert grader assesses the subjects from a distance of approximately 60 cm, during which time subjects are asked to relax and refrain from making any facial expressions. The expert grader evaluates area, contrast and color of the periorbital region of the subject when classifying.


Image Grading


When visually evaluating and classify periorbital dyschromia from images, it may be desirable to capture an image of the region of interest of the test subject. To capture an image, prepare the subject by covering the hair of the subject with a hairnet and covering the head and shoulders of the subject with a black cloth. All jewelry that can be seen in an image is removed. The subject is seated on the adjustable stool and rotated towards the chin rest. The operator adjusts the stool such that the subject's chin rests comfortably on the chin rest. Front view images are captured using the Cross Polarized lighting modality. The images are evaluated in a dark room using professional color calibrated LCD monitors such as LACIE brand monitors. Graders are positioned approximately 60 cm from the monitor. Attributes such as area, intensity, contrast, color and continuity are evaluated for each subject.


Imaging Method


This method provides a suitable means for capturing a reproducible and analyzable image. Any suitable image capture device along with imaging software and other associated ancillary equipment (e.g., computer and lights) may be used. A particularly suitable imaging system is the Visia-CR® brand imaging system, available from Canfield Scientific, New Jersey. The Visia® brand imaging system incorporates a Canon® brand EOS-1Ds Mk III SLR camera, which includes a CMOS sensor and provides 21.1 Mega pixel resolution (14-bit A/D converter).


Images may be collected under different lighting modalities using standard light, UV, cross-polarization, parallel-polarization or a combination of these. For example, the values and ranges described herein are reported using a (D65/2) light source. One skilled in the art will appreciate that these values can be reported at a wide range of different illuminations (D50, D75, Illuminant A, F2, F7, F11, TL84, etc. or 2 or 10 degree observer) according to well known conversion methods, and when such conversions occur, the color values will typically change accordingly. In other words, even though the actual limits and/or ranges may change based on the conditions under which the image is captured, similar relationships among the values and ranges will still be seen. For example, if the camera has lower spectral sensitivity in the red channel than the camera described herein, the R channel response may be lower and the corresponding L*a*b*C*h* (“LabCh”) color values will be different, which in this case may result in lower a* values, higher b* values, and/or higher hues. Accordingly different camera sensitivities, lightings and relevant exposures are contemplated by the method herein, and the actual limits and/or ranges disclosed herein may vary according to the particular circumstances in which the image is captured without departing from the scope of the systems and/or methods described herein.


In preparation for image capture, test subjects are required to wash their faces and wait for at least 15 minutes to let their face dry. The hair of the subject is covered with a hairnet and the head and shoulders of the subject are covered with a black cloth. All jewelry that can be seen in an image area of interest is removed. The subject is positioned such that the subject's chin is resting comfortably on the chin rest of the imaging system, and a front image of the face (as opposed to a left-side or right-side image) can be suitably captured by the image capture device. After the subject is positioned, one or more images are captured (e.g., between 1 and 24, 2 and 20 or even between 3 and 15) with the subject's eyes open. It can be important to ensure that the subject's eyes are open when the image is captured, otherwise the closed upper eyelid may cause an inaccurate pigmentation reading. The captured image(s) are processed by converting the raw image to a .jpg file format.


Next, the .jpg format image is analyzed by a computer with suitable image analysis software. In some instances, it may be desirable to analyze only a portion of the image (e.g., Zone 1, 2 and/or 3 of the periorbital region). The portion of the image to be analyzed may be “masked,” for example, as shown in FIGS. 14 to 18, using image editing software such as Photoshop® or ImageJ®. The masked region can then be isolated and analyzed as a separate image. FIG. 14 illustrates an example of a masked region corresponding to Zone 1, which is referred to herein as “Mask A.” FIG. 15 illustrates an example of a masked region corresponding to Zone 2, which is referred to herein as “Mask B.” FIG. 16 illustrates an example of a masked region corresponding to Zones 1 and 2, which is referred to herein as “Mask C.” FIGS. 17 and 18 both illustrate an example of a masked region corresponding to the cheek. It is to be appreciated that the image need not necessarily be masked for suitable analysis, and in some instances the entire image may be analyzed. In some instances, it may be desirable to reduce the size of the image, mask and/or region of interest by several pixels (e.g., between 5 and 15 pixels) around the outer edge of the image where some shadowing may occur.


In some instances, it may be desirable to convert some or all of the RGB values in the image or a portion thereof to LabCh values. The LabCh values can be calculated using a suitable RGB conversion tool at D65 Illuminant and 2 degree observer (i.e., D65/2). This conversion can be performed by software installed on the computer or a suitable conversion tool may be found online. The conversion from RGB values to LabCh values can be performed on the entire image, a portion thereof or on one or more individual pixels. The resulting LabCh values may be averaged to provide average values for the image, mask or region of interest.


In some instances, the pixels may be analyzed individually and each pixel classified as corresponding to a particular type of periorbital dyschromia based on one or more of the LabCh values. When analyzed individually, the pixels may be analyzed according to their distribution across the different types of periorbital dyschromia. An example of classifying periorbital dyschromia based on individual pixel distributions is described below in Example 2. Since color may be perceived as being relative, depending on, for example, which instruments and/or imaging system is used, it can be important to color correct the masked region for each subject using a suitable color correction technique (e.g., according to International Color Consortium standards and practices), which helps make the color determination by the system less instrument specific. In some instances, it may be desirable to normalize the color in a region of interest (e.g., a masked region) to the basal skin tone of a nearby region (e.g., cheek). For example, the basal skin tone of the cheek may be obtained by masking a region of interest in the cheek (e.g., as illustrated in FIG. 20 or 21) and converting the RGB values in the masked region to L*a*b*C*h* values as described above. The resulting basal skin tone values for the cheek may then be subtracted from the corresponding values in the region of interest to provide normalized values. Color normalization may be performed on the entire region of interest (e.g., an average value for the ROI) or on a pixel by pixel basis for some or all of the pixels in the ROI, which may be 200,000 or more pixels. The following formula provides an illustration of color normalization.

DL1=Lpixel1−Lcheekave
DC1=Cpixel1−Ccheekave
Dh1=hpixel1−hcheek ave

    • Where DL, DC and Dh are the normalized L*, C*, and h* values, respectively, of a pixel in the mask region; Lpixel, Cpixel and hpixel are the respective L*, C* and h* values of the pixels as determined from the image analysis; and Lcheekave, Ccheekave and hcheekave are the respective average L*, C* and h* values determined for the cheek.


      Biopsy Method.


The biopsy method provides a suitable means for collecting, processing, storing and staining skin tissue samples. The biopsy also provides a suitable means for analyzing the skin samples for histological features associated with the different types of periorbital dyschromia. It is to be appreciated that certain portions of the method may refer to particular tools, equipment, or materials and the use thereof, but, unless indicated otherwise, one of ordinary skill in the art will recognize that equivalent tools, equipments and/or materials and the uses thereof may also be employed without departing from the scope of this method.


Sample Collection.


Skin tissue samples herein may be collected by means of a biopsy, which involves the physical removal of skin tissue from a subject. Biopsy samples collected for use herein may be removed according to any safe and aseptic biopsy method known in the art. For example, the biopsy samples may be collected from a living subject by a physician using conventional, aseptic techniques, and then flash frozen in liquid nitrogen and stored at −80° C. Eyelid biopsy sample collection involves the removal of skin tissue (down to the fatty layer) with, for example, a small elliptical surgical snip (e.g., Westcott™ brand scissors or equivalent). In at least some subjects, the elliptical shape of the incision allows for improved healing in the eyelid areas. Biopsy samples from other areas of skin on the body (e.g., cheek, forehead, arm or leg) may be obtained using, for example, a 2 mm sterile punch biopsy instrument. The size of the resulting punch biopsy sample is typically 2.0 mm in diameter and between 0.25 mm to 1.5 cm thick. In some instances, it may be desirable to suture the biopsy site.


Sample Storage


Biopsy samples should be frozen as soon as possible to minimize sample degradation Thus, it may be desirable to embed the biopsy samples in optimum cutting temperature (“OCT”) tissue freezing medium (e.g., Tissue-tek® brand OCT tissue freezing medium available from Sakura Finetek, Calif.) within 5 minutes of biopsy collection and store the samples in a suitable freezer at a temperature of −80° C. or less.


Sample Sectioning.


Frozen biopsy samples may be sectioned using a Microm HM500 brand cryostat or equivalent. The cryostat should include a microtome capable of producing multiple slices of sectioned tissue sample ranging from 5 to 300 μm in thickness. For example, 14 μm thick sectioned tissue samples are suitable for use herein. Sectioned tissue samples may be placed on slides or other support medium suitable for further analysis (e.g., viewing under a light microscope).


Sample Staining.


Hematoxylin and Eosin stain are commonly used in pathology to get an overall assessment of the tissue and determine if structural abnormalities are present. Commercially available kits such as the Shandon Rapid Chrome Frozen Section Kit available from Thermo Scientific may be used according to the manufacturer's protocol for H&E staining of the sectioned tissue samples. Other staining techniques suitable for identifying histological features in a skin tissue sample (e.g., commercially available Fontana-Masson staining kits) may also be used herein in accordance with a manufacturer's protocol and/or another suitable method known in the art.


Tape Stripping Method


This method provides a suitable means of obtaining PTCA and/or other biomarkers from biological samples collected from test subjects. It has been discovered that biological material collected in this way may be correlated to a type of periorbital dyschromia (i.e., Type I, Type II, Type III or No Dyschromia). Samples may be collected by contacting a suitable adhesive-containing substrate (“tape strip”) with a target skin surface such that biological material on and/or in the targeted skin portion adheres to the adhesive. Examples of suitable tape strips for use herein include D-Squame® brand polyacrylate ester adhesive tape (available from CuDerm; Dallas Tex.), Durapor, Sebutape™, and Tegaderm™ brand tape, duct tape (e.g., 333 Duct Tape, Nashua tape products), Scotch® brand tape (3M Scotch 810, St. Paul, Minn.), Diamond™ brand tape (The Sellotape Company; Eindhoven, the Netherlands), Sentega™ (polypropylene tape, Sentega Eiketten BV, Utrecht, The Netherlands).


The tape strips are digested with a suitable quantity and concentration of hydrogen peroxide to obtain PTCA from eumelanin. PTCA and its stable-isotope-labeled internal standard, PTCA-18O, are then isolated from the digest by a liquid-liquid extraction procedure. The extracted analyte is subjected to reverse-phase, high-performance liquid chromatographic (“HPLC”) analysis on a Waters Atlantis dC18 (3 μm 2.1×100 mm) or equivalent. Detection and quantitation of the PTCA is by tandem mass spectrometry (MS/MS) operating under multiple reaction monitoring conditions, as described in more detail below. Calibration standards are used to quantitate extracted Quality Control samples and unknown Study Specimens. The nominal range of quantitation is 0.15 to 100 ng of PTCA per sample. The concentration of PTCA is determined in the tape strip extract and then converted into total mass/tape strip by multiplying by the extraction volume. The squame scan total protein content found on the tape strips and extracts is determined and the final results are reported as total mass of analyte (ng or μg) per total weight of protein (μg) per sample. Specimen concentrations are determined by back-calculation using a weighted (1/x2) quadratic regression of a calibration curve generated from spiked matrix standards.


Sample Collection


A suitably sized tape strip (e.g., 14 mm diameter (circular) D-Squame® brand polyacrylate ester adhesive tape) is placed on a clean area of the target skin surface (e.g., periorbital region and/or cheek) and adequate pressure is applied to obtain the sample but not cause discomfort to the subject. The tape strip sample is then stored in a suitable storage container (e.g., storage tray or tube) until subjected to the digestion process.


PTCA Analysis


The tape strip sample is carefully removed from the storage container using tweezers. The tape strip sample is curled such that the adhesive-side faces inward and the non-adhesive side faces outward to reduce the possibility of contaminating the skin sample contained on the adhesive side of the tape. The curled tape strip sample is placed as deeply as possible into a 2 mL-polypropylene analysis tube in preparation for extraction of the biological material. The tape strip sample may be transferred to the analysis tube on the day of extraction or samples may be placed on storage plates and transferred to the 2 mL analysis tubes prior to extraction.


The tape strip sample is transferred from the 2 mL analysis tube to a 4 mL cryogenic Nalgene tube. A matrix blank is also prepared. The blank acts as a control and undergoes the sample process as the samples, but does not include a tape strip sample. 0.900 mL of 2 M ammonium hydroxide and 0.900 mL of 6% hydrogen peroxide are added to each of the Nalgene tubes, capped and vortexed. The tubes are placed on a rocker to incubate for three hours at 200 Mot/minute. The tubes are removed from the rocker and carefully uncapped to release any pressure that may build up during incubation. The liquid contents of each 4 mL Nalgene tube are transferred to separate 15 mL conical tubes. The tape strip is discarded and not transferred to the 15 mL conical tube. 32 μL of 10% sodium bisulfite is added to each 15 mL conical tube, capped and vortexed. Add 50 μL internal standard solution, cap and vortex. Internal standard solution is prepared as follows:

    • Using the appropriate Internal Standard Reference Standard (i.e., stable, isotope-labeled PTCA 18O) weigh approximately 5 mg of Internal Standard into a glass scintillation vial and record the weight to at least the nearest 0.01 mg. Add of the exact amount of 10 mM ammonium acetate solution to give exactly a 1.00 mg/mL solution of the compound according to the following equation:







Volume






(
mL
)


=



Mass





of





material






(
mg
)



1.0






mg
/
mL



×
Purity
×
SCF







    •  Where:
      • Purity=Decimal % purity assigned to the Analytical Reference Standard; and
      • SCF=salt correction factor.

    • Cap with a polytetraflouroethylene-lined cap and mix thoroughly and sonicate to dissolve the compound. Store the resulting solutions at −70 C.


      2.00 mL of methyl-tert-butyl ether, 1.00 mL of 37% HCL, and 1.00 mL of saturated ammonium sulfate are added to each tube. The tubes are capped and vortexed. Centrifuge the samples at 3,000 RPM for 15 minutes and then transfer 1.00 mL of the organic layer of each tube to separate liquid chromatography vials. Dry the vials down under nitrogen as is known in the art. Reconstitute the vials with 0.250 mL of ammonium acetate, cap and vortex. Analyze the samples by high-performance liquid chromatography (HPLC)/mass spectrometry (MS)/mass spectrometry (MS).





EXAMPLES
Example 1

This example illustrates how different types of periorbital dyschromia can be distinguished using the Visual Classification Method. The Munsell Book of Color, Matte Collection (Munsell Color, Inc.) nomenclature is used to describe the color appearance of the different types of periorbital dyschromia or the lack thereof. The basal skin tone in this example refers to overall tone of the skin on the cheek.


1. No Dyschromia: occurs when there is no discoloration present in the periorbital region, discoloration is present but the intensity is very low (“non-severe”), or the discoloration does not extend beyond the inner corner of the eye (e.g., into Zone 1).


2. Type 1 Periorbital Dyschromia: occurs when Zone 1, Zone 2 and Zone 3 of the periorbital skin region are affected with a “tanned-like” skin tone. The tanned-like appearance found on Type I periorbital dyschromia may result from a darkening of the periorbital skin and an increase of the chroma relative to the basal skin tone. In this scenario, the hue in the periorbital skin is similar to basal skin hue. The Munsell Book of Color, Matte Collection (Munsell Color, Inc.) nomenclature can be used to describe this visual classification. For example, a Caucasian female (i.e., Fitzpatrick skin type I to III) who has basal skin tone of 10R 7/4 according to the Munsell Color nomenclature (H V/C—which corresponds to “hue”, “value” (i.e., darkness) and “chroma” respectively), will be classified as Type 1 when the periorbital skin V value is 6 or lower and C value is 5 or higher (e.g., 10R 6/5 10R6/6, 10R 5/5, 10R 5/6). In another example, a Caucasian female with basal skin tone 10R 7/4 will be classified as Type I when the periorbital skin value 2.5YR 5/5 or 2.5YR 5/6.


3. Type II Periorbital Dyschromia: occurs when Zone 1 of the periorbital skin is affected with a “bruised-liked” tone relative to the basal skin. Bruised appearance of the periorbital skin can be a result of a darkening of the skin accompanied by a decrease in chroma relative to the basal skin tone. In this case, the periorbital skin hue may be similar to basal skin hue. For example, using the Munsell Matte Color collection, a Caucasian female with a basal skin tone of 10R 7/4 may manifest a bruised appearance characteristic of Type II periorbital dyschromia when the V value for Zone I and/or II drops to 6 or below and the chroma value drops to 4 or below (e.g., 10R 6/3, 10R6/2, 10R 5/3, 10R 5/2). The bruised appearance characteristic of Type II periorbital dyschromia can also result when the periorbital skin gets darker, chroma decreases and red hues are present. A Caucasian female with a basal skin tone of 10R 7/4 will manifest bruised appearance of Type II periorbital dyschromia when the periorbital skin hue is 7.5R, V is less than 7 and Chroma is less than 4 (e.g., 7.5R 6/2, 7.5R 5/2 7.5R 6/3, or 7.5R5/3).


4. Type III Periorbital Dyschromia: may occur when elements of both Type I and Type II periorbital dyschromia are present. Type III is typically observed in Zone I and Zone 2 of the periorbital region, and may a display “bruised-like” and “tanned-like” appearance. The “bruised-like” and “tanned-like” appearances may be observed in the same or different periorbital Zones simultaneously. For example, a Caucasian female may exhibit Type III periorbital dyschromia when Zone I displays a bruised appearance and Zone II displays tanned appearance. Type III periorbital dyschromia can also occur when bruised and tanned appearance occur simultaneously in Zone I and Type III can also occur when Zone 1 and/or Zone 2 of the periorbital region are affected with “bruised-like” and “tanned like” appearance and Zone 3 is effected by either “bruised-like” or “tanned-like” appearance. Type III can also occur when there is a darkening in the periorbital skin when compared to basal skin such as the cheek with no change in chroma value. For a Caucasian female with basal skin tone 10R 7/4, Type III periorbital dyschromia may occur from a darkening in the skin with no change in chroma, can be represented, for example, by 10R 6/4, 7.5R 6/4.


Example 2

This example illustrates the distinctions between Type I, Type II and Type III periorbital dyschromia using imaging methods. Using the methods described herein, images were obtained from test subjects identified as having Type I, Type II, or Type III periorbital dyschromia, and the RGB values and B/G ratios from each of zones 1, 2 and 4 were determined for each subject. Zone 4 refers to the combination of Zones 1 and 2. The zones were masked as described in the imaging analysis method above. Zone 4 was masked as illustrated in FIG. 16. Side-by-side plots of the various RGB values and B/G ratios are illustrated in FIGS. 19 to 30. The percentile shown on the y-axis of the charts in FIGS. 19 to 30 represents the percentile ranking of each individual in the distribution. The data point at the 50th percentile represents the median of the data set (i.e., the individual who was in the middle of the rank ordered population). The X-axis shows the average imaging value for the region analyzed. As can be seen in FIGS. 19-30, those individuals who fall generally in the middle of the population distribution (e.g., between the 25th and 75th percentile; the 33rd and 67th percentile; or the 40th and 60th percentile) exhibit color imaging values that can be used to distinguish the different types of periorbital dyschromia from one another.



FIGS. 19-30 are side-by-side comparisons of graphical plots representing imaging values corresponding to Type I, Type II and Type III test subjects. FIG. 19 shows a side-by-side comparison of Zone 1 R values. FIG. 20 shows a side-by-side comparison of the Zone 1 B values. FIG. 21 shows a side-by-side comparison of the Zone 1 G values. FIG. 22 shows a side-by-side comparison of the Zone 1 B/G ratios. FIG. 23 shows a side-by-side comparison of the Zone 2 R values. FIG. 24 shows a side-by-side comparison of the Zone 2 G values. FIG. 25 shows a side-by-side comparison of the Zone 2 B values. FIG. 26 shows a side-by-side comparison of the Zone 2 B/G ratios. FIG. 27 shows a side-by-side comparison of the R values from Zone 4. FIG. 28 shows a side-by-side comparison of the B values from Zone 4. FIG. 29 shows a side-by-side comparison of the plots of the G values from Zone 4. FIG. 30 shows a side-by-side comparison of the plots of the B/G ratios from Zone 4.


Because skin is complex, there can be many different colors in a particular region of interest. Different people may appear to have some or all of the same colors present in particular area of skin, but the colors may be present at different percentages. And it is the distribution and/or preponderance of the different colors in the region of interest that drives how periorbital dyschromia is perceived. Thus, the images described in this Example were also analyzed on a pixel by pixel basis to determine if differences between different types of periorbital dyschromia could be observed. The RGB values for each pixel were converted to LabCh values as described in the imaging method above, and the L, C and h values were normalized to the cheek basal skin tone. The DL, Dc and Dh values of each pixel are classified as follows:


DL>−5: the pixel is not meaningfully darker than the nearby cheek skin (or it could even be lighter), these pixels were classified as No Dyschromia


DL<−5 and DC>2: the pixel is both darker and more chromatic than the nearby skin. These pixels are classified as Type I.


DL<−5 and DC<2: the pixel is darker, but without a meaningful increase in chroma. These pixels are classified as Type II periorbital dyschromia.


After each pixel was classified, the distribution of the pixels in the masked region was determined by counting the number of pixels classified as each type of periorbital dyschromia (i.e., No Dyschromia, Type I and Type II) and dividing by the total number pixels in each mask to obtain percentages, (e.g., % Type I=# pixels classified as Type I divided by Total # pixels) Table 1 illustrates how the different types of periorbital dyschromia may be classified based on the observations from the pixel by pixel analysis of the images.












TABLE 4








Subject



Pixel Distribution
Classified as:









>36.4% classified as Type I
Type I



<9.6% classified as Type I; AND
Type II



>21.2% classified as Type II




>9.6% but less than 36.4%
Type III



classified as Type I; AND >20%




classified as Type II.




<9.6% classified as Type I AND
No



<21.2% classified as Type II.
Dyschromia










Example 3

This example further illustrates how imaging values can be used to distinguish Type I, Type II and Type III periorbital dyschromia. Using the methods described herein, images were obtained from test subjects identified as having Type I, Type II, or Type III periorbital dyschromia, and the color corrected imaging values for each of Mask A, Mask B and Mask C were determined for each image. Table 5 shows the resulting values.









TABLE 5







Type I












Imaging Value
Mask A
Mask B
Mask C
















R
153
167
161



G
108
123
116



B
95
101
98



B/G
0.87
0.82
0.84



L
50
55
53



a*
16
14
15



b*
15
19
17



Hue (h)
43
53
49



Chroma (C)
22
23
23

















TABLE 6







Type II












Imaging Value
Mask A
Mask B
Mask C
















R
161
176
169



G
119
135
128



B
108
116
112



B/G
0.91
0.86
0.88



L
54
60
57



a*
15
13
14



b*
12
17
15



Hue (h)
39
52
46



Chroma (C)
20
21
20

















TABLE 7







Type III












Imaging Value
Mask A
Mask B
Mask C
















R
157
176
167



G
113
133
124



B
101
111
107



B/G
0.89
0.84
0.86



L
52
59
56



a*
16
13
14



b*
14
18
16



Hue (h)
41
54
48



Chroma (C)
21
23
22










This example illustrates the histological differences between No Dyschromia, Type I, Type II and Type III periorbital dyschromia. Biopsy samples were collected from upper eyelid, lower eyelid and the area of the face near the temple of fifty-five test subjects. The biopsy samples were collected, stored, sectioned and stained with H&E stain according to the Biopsy method above. An analysis of the sectioned and stained samples revealed the presence of deposits disposed around the nuclei of cells clustered together in the dermal region of the tissue sample. The deposits appeared brown in a color micrograph, and it is believed that the deposits are melanin. The samples were stained with Fontana-Masson stain and turned black (i.e., “Fontana-Masson positive deposits”), which indicates that the deposits may be melanin.


Thirty biopsy samples representative of the four different classifications were selected at random for further analysis (6 non-dyschromia samples, 9 Type I sample, 9 Type II samples, and 6 Type III samples). The thirty samples were analyzed at 20× magnification under an Olympus® Model BX51TRF brand light microscope. For the analysis, a minimum of two tissue sections and 8 fields of view (“FOV”), which is defined as the area of tissue that can be observed under 20× magnification, are analyzed per subject. The analysis revealed that Type I and Type III periorbital dyschromia exhibited higher amounts of the Fontana-Masson positive deposits on the dermis than Type II and those subjects identified as not having severe periorbital dyschromia. The average number of Fontana-Masson positive deposits per field of view is provided in Table 2 below. FIG. 12 graphically depicts the results illustrated in Table 2.













TABLE 8






No






Dyschromia
Type I
Type II
Type III



















Subject 1
2.88
15.00
0.87
13.6


Subject 2
4.67
11.50
0.10
4.19


Subject 3
1.69
22.45
0.00
2.35


Subject 4
1.94
12.96
4.00
3.81


Subject 5
2.58
11.50
0.38
6.33


Subject 6
2.33
6.95
0.56
14.25


Subject 7

10.58
0.07



Subject 8

12.33
0.00



Subject 9

21.78
0.50



Average
2.68
13.89
0.75
7.42


STD DEV
0.43
1.49
0.45
2.12









As can be seen in Table 8 and FIG. 12, the Fontana-Masson positive deposits distinguish the different types of periorbital dyschromia from each other and from the control. The chart in FIG. 12 illustrates this distinction based on the difference in the average number of Fontana-Masson positive deposits observed per FOV under 20× magnification.


Example 4

This example illustrates the differences in gene expression between No Dyschromia, Type I, Type II and Type III periorbital dyschromia. In this example, gene expression profiles and phenotype themes were determined from biopsy samples of female test subjects aged 18 to 45 who were classified as exhibiting Type I, Type II or Type III periorbital dyschromia by an expert grader. Thirteen subjects were classified as Type I periorbital dyschromia, fourteen subjects were classified as Type II periorbital dyschromia, seven subjects were classified as Type III periorbital dyschromia, and 8 test subjects were classified as No Dyschromia. The biopsy samples were collected, stored and sectioned according to the Biopsy method described above. The epidermis and dermis layers of the section biopsy samples were separated with a PALM Microbeam IV™ brand Laser-capture Micro dissection (“LCM”) system (available from Carl Zeiss MicroImaging GmbH, Germany) in accordance with the manufacturer's instructions.


After separating the epidermal and dermal layers of the sectioned biopsy samples, each layer was subjected to RNA extraction. In this example, RNA was extracted from each of the epidermis and dermis layers by utilizing the Arcturs picopure kit according to the manufacturer's instructions. RNA quantification and quality assurance was performed using Agilence 2100 bioanalyzer. Of course it is to be appreciated that any suitable means of extracting RNA from a tissue sample known in the art may be used. The extracted RNA was then run on a GeneTitan U129 brand microarray to identify how certain genes were expressed in each sample. A statistical analysis of the microarray data was performed to derive the gene expression signatures. A general description of the statistical analysis is provided below. It is to be appreciated that while the statistical analysis below provides a suitable means of generating a gene signature from the microarray data, other statistical methods known in the art may also be suitable for use herein.


Filtering based on Present Calls


Filtering creates a list of potential genes for inclusion in the gene expression signature. For example, as a first filter step, at least 50% of the samples in one treatment group must have a “Present call” for each probe set. Present calls are derived from processing the raw microarray data and provide evidence that the gene transcript complementary to a probe set is actually expressed in the biological sample. The probes that are absent from all samples are likely to be just noisy measurements. It is important to filter out probe sets that do not contribute meaningful data to the signature. For all gene expression signatures in this example, the data was filtered for probe sets with at least 10% Present calls provided by the Affymetrix MAS 5 software.


Filtering According to a Statistical Measure


As a second filtering step, it may be desirable to use a suitable statistical measure such as, for example, p-values from a t-test, ANOVA, correlation coefficient, or other suitable model-based analysis. Limiting the gene signature list to genes that meet some reasonable cutoff (e.g., p ≤0.05, 0.01, 0.001, or even ≤0.0001 or less) for statistical significance compared to an appropriate control is important to allow selection of genes that are characteristic of the biological state of interest. This is preferable to using a fold change value, which does not take into account the noise around the measurements. For example, p-values may be chosen as the statistical measure and a cutoff value of p≤0.05 may be chosen. The t-statistic was used in this example to select the probe sets in the signatures because it provides an indication of the directionality of the gene expression changes (i.e. up- or down-regulated) as well as statistical significance.


Sorting the Probe Sets


All the probe sets are sorted into sets of up-regulated and down-regulated sets using the statistical measure. In this example, a t-test was used to compute p-values, the values (positive and negative) of the t-statistic are used to sort the list since p-values are always positive. The sorted t-statistics will place the sets with the most significant p-values at the top and bottom of the list with the less-significant p-values being placed towards the middle.


Creation of the Gene Expression Signature


Using the filtered and sorted list created, a suitable number of probe sets from the top and bottom are selected to create a gene expression signature that preferably has approximately the same number of sets chosen from the top as chosen from the bottom. For example, the gene expression signature created may have at least 10, 50, 100, 200, or 300 and/or less than 800, 600, or about 400 genes corresponding to a probe set on the chip. The number of probe sets approximately corresponds to the number of genes, but a single gene may be represented by more than one probe set. It is understood that the phrase “number of genes” as used herein, corresponds generally with the phrase “number of probe sets.”


U.S. Publication No. 2012/0283112 titled “Systems and Methods For Identifying Cosmetic Agents For Skin Care Compositions” filed by Binder, et al., on Feb. 22, 2012 and U.S. Publication No. 2013/0261007 titled “Systems, Models and Methods for Identifying and Evaluating Skin-Active Agents Effective for Treating Conditions and Disorders of Skin Pigmentation,” filed by Hakozaki, et al., on Mar. 27, 2012 disclose suitable nonlimiting examples of methods of generating a gene expression profile.


Tables 9 through 20 below show gene expression signatures associated with Type I, Type II or Type III periorbital dyschromia, as compared to the gene expression signature for No Dyschromia. The gene expression data was obtained by extracting RNA from lower eyelid biopsy samples obtained according to the biopsy method. Only genes that showed up-regulation or down-regulation with a p-value of 0.05 or less and fold change of 1.1 or more are shown. Table 9 shows the top 100 up-regulated genes expressed in the epidermis of subjects identified as having Type I periorbital dyschromia. Table 10 shows the top 100 down-regulated genes expressed in the epidermis of subjects identified as having Type I periorbital dyschromia. Table 11 shows the top 100 up-regulated genes expressed in the dermis of subjects identified as having Type I periorbital dyschromia. Table 12 shows the top 100 down-regulated genes expressed in the dermis of subjects identified as having Type I periorbital dyschromia. Table 13 shows the top 100 up-regulated genes expressed in the epidermis of subjects identified as having Type II periorbital dyschromia. Table 14 shows the top 100 down-regulated genes expressed in the dermis of subjects identified as having Type II periorbital dyschromia. Table 15 shows the top 71 up-regulated genes expressed in the dermis of subjects identified as having Type II periorbital dyschromia. Table 16 shows the top 100 down-regulated genes expressed in the dermis of subjects identified as having Type II periorbital dyschromia. Table 17 shows the top 100 up-regulated genes expressed in the epidermis of subjects identified as having Type III periorbital dyschromia. Table 18 shows the top 100 down-regulated genes expressed in the epidermis of subjects identified as having Type III periorbital dyschromia. Table 19 shows the top 100 up-regulated genes expressed in the dermis of subjects identified as having Type III periorbital dyschromia. Table 20 show the top 100 down-regulated genes expressed in the dermis of subjects identified as having Type III periorbital dyschromia.









TABLE 9







Type I Epidermis; Up-regulated











GeneTitan_ID
Gene
Title
Public ID
p





11719428_a_at
BTBD7
BTB (POZ) domain containing 7
AI580162
0.000259


11724297_a_at
BMP7
bone morphogenetic protein 7
NM_001719.2
0.000396


11715192_s_at
C7orf46
chromosome 7 open reading frame 46
g188219621
0.000446


11724759_s_at
CALM1
calmodulin 1 (phosphorylase kinase,
NM_006888.3
0.000486




delta)




11735610_a_at
RPS6KA5
ribosomal protein S6 kinase, 90 kDa,
AF074393.1
0.000746




polypeptide 5




11758022_s_at
TNNI2
troponin I type 2 (skeletal, fast)
AA728828
0.00151


11721260_a_at
WDR47
WD repeat domain 47
NM_001142550.1
0.001528


11727979_a_at
MAN2B2
mannosidase, alpha, class 2B,
BC094773.1
0.002024




member 2




11753967_a_at
SLC6A2
solute carrier family 6
AK301811.1
0.002393




(neurotransmitter transporter,






noradrenalin), member 2




11722090_a_at
EFNA4
ephrin-A4
NM_005227.2
0.002687


11758092_s_at
EFNA5
ephrin-A5
BE464799
0.002776


11717146_at
PTPN1
protein tyrosine phosphatase, non-
NM_002827.2
0.002876




receptor type 1




11716283_at
PAPD7
PAP associated domain containing 7
NM_006999.3
0.003497


11746140_a_at
ARHGEF26
Rho guanine nucleotide exchange
AF415176.1
0.003751




factor (GEF) 26




11724038_a_at
PTGS2
prostaglandin-endoperoxide
BC013734.1
0.003867




synthase 2 (prostaglandin G/H






synthase and cyclooxygenase)




11723156_a_at
LSP1
lymphocyte-specific protein 1
NM_001013254.1
0.004011


11729840_s_at
ZCCHC2
zinc finger, CCHC domain containing 2
NM_017742.4
0.004086


11754302_a_at
ATP2A2
ATPase, Ca++ transporting, cardiac
BM676899
0.004156




muscle, slow twitch 2




11754447_a_at
RPS6KA5
ribosomal protein S6 kinase, 90 kDa,
BM968829
0.00436




polypeptide 5




11739724_a_at
ATP2B2
ATPase, Ca++ transporting, plasma
AL138283
0.004438




membrane 2




11723075_a_at
BCL9L
B-cell CLL/lymphoma 9-like
AY296059.1
0.00493


11717385_a_at
MT1G
metallothionein 1G
NM_005950.1
0.005447


11758557_s_at
ZFP36L1
zinc finger protein 36, C3H type-like 1
AI758505
0.005544


11724628_a_at
MAT1A
methionine adenosyltransferase I,
NM_000429.2
0.005576




alpha




11744955_a_at
ANXA1
annexin A1
AK296808.1
0.005629


11718966_at
NUFIP2
nuclear fragile X mental retardation
BU533767
0.006124




protein interacting protein 2




11744953_a_at
ANXA1
annexin A1
BC034157.1
0.007553


11717387_x_at
MT1G
metallothionein 1G
NM_005950.1
0.007682


11727642_a_at
TRERF1
transcriptional regulating factor 1
AF111801.1
0.0078


11745806_a_at
AMMECR1L
AMME chromosomal region gene 1-like
AK095871.1
0.008163


11717514_a_at
ANXA1
annexin A1
NM_000700.1
0.008725


11744954_x_at
ANXA1
annexin A1
BC034157.1
0.009223


11743864_a_at
ATP2B1
ATPase, Ca++ transporting, plasma
S49852.1
0.009249




membrane 1




11717927_at
FOXK2
forkhead box K2
NM_004514.3
0.009268


11717386_s_at
MT1G
metallothionein 1G
NM_005950.1
0.009421


11730080_x_at
IL28RA
interleukin 28 receptor, alpha
NM_170743.2
0.009429




(interferon, lambda receptor)




11763297_x_at
CCDC76
coiled-coil domain containing 76
BQ614335
0.010042


11726119_at
RPGR
retinitis pigmentosa GTPase regulator
AK291832.1
0.01012


11739805_a_at
RASAL2
RAS protein activator like 2
AK075169.1
0.010243


11715190_s_at
C7orf46
chromosome 7 open reading frame 46
g188219617
0.010448


11726351_at
EFNA5
ephrin-A5
CB240929
0.010459


11738035_s_at
RTN4
reticulon 4
AK302741.1
0.010618


11724104_s_at
SGK3
serum/glucocorticoid regulated
NM_001033578.1
0.010735




kinase family, member 3




11729396_a_at
NEK1
NIMA (never in mitosis gene a)-
Z25431.1
0.010781




related kinase 1




11723592_at
LRRC8C
leucine rich repeat containing 8
NM_032270.4
0.011015




family, member C




11757982_s_at
KIF21A
kinesin family member 21A
N39407
0.011191


11731899_s_at
PPAT
phosphoribosyl pyrophosphate
D13757.1
0.01137




amidotransferase




11726633_s_at
TRIM8
tripartite motif-containing 8
BC021925.1
0.011932


11725675_a_at
RORA
RAR-related orphan receptor A
AA034012
0.012081


11745021_a_at
MYC
v-myc myelocytomatosis viral
K02276.1
0.012276




oncogene homolog (avian)




11758246_s_at
ARL4D
ADP-ribosylation factor-like 4D
BM719529
0.012438


11726634_a_at
MYST3
MYST histone acetyltransferase
NM_001099412.1
0.012468




(monocytic leukemia) 3




11735421_a_at
NKD2
naked cuticle homolog 2
AF358137.1
0.013343




(Drosophila)




11723821_a_at
SMURF2
SMAD specific E3 ubiquitin protein
AY014180.1
0.013348




ligase 2




11733165_s_at
YIPF5
Yip1 domain family, member 5
NM_001024947.2
0.013814


11723169_s_at
FOXN2
forkhead box N2
NM_002158.3
0.014398


11728958_x_at
E2F8
E2F transcription factor 8
NM_024680.2
0.014717


11762525_s_at


AF339086.1
0.015079


11731645_a_at
CAMKK2
calcium/calmodulin-dependent
BC026060.2
0.016269




protein kinase kinase 2, beta




11730893_a_at
UBA6
ubiquitin-like modifier activating
EF623993.1
0.016784




enzyme 6




11730360_at
CCDC126
coiled-coil domain containing 126
NM_138771.3
0.016798


11736426_s_at
CLIP4
CAP-GLY domain containing linker
BM994685
0.017149




protein family, member 4




11725820_s_at
PAQR3
progestin and adipoQ receptor
NM_001040202.1
0.01721




family member III




11743411_a_at
RBM25
RNA binding motif protein 25
BG251218
0.017641


11718873_a_at
ATP2A2
ATPase, Ca++ transporting, cardiac
NM_170665.3
0.018009




muscle, slow twitch 2




11739797_a_at
RFX2
regulatory factor X, 2 (influences
NM_134433.2
0.018119




HLA class II expression)




11739408_at
MLL3
myeloid/lymphoid or mixed-lineage
DN917896
0.018481




leukemia 3




11734164_a_at
ARHGEF26
Rho guanine nucleotide exchange
NM_015595.3
0.018897




factor (GEF) 26




11721039_a_at
SOLH
small optic lobes homolog
NM_005632.2
0.019352




(Drosophila)




11721053_s_at
KLHDC5
kelch domain containing 5
NM_020782.1
0.01948


11753735_x_at
TMSB4X
thymosin beta 4, X-linked
BC101792.1
0.019698


11748149_a_at
FNBP1
formin binding protein 1
AK293743.1
0.019714


11728706_x_at
EMP2
epithelial membrane protein 2
DB374012
0.020127


11717989_a_at
SUN1
Sad1 and UNC84 domain containing 1
NM_001130965.1
0.020293


11722448_at
KCNMB4
potassium large conductance
AF160967.1
0.020548




calcium-activated channel,






subfamily M, beta member 4




11727512_at
UBN2
ubinuclein 2
CA775887
0.020981


11759962_at
TPRKB
TP53RK binding protein
AY643713.1
0.021007


11728603_a_at
CLDN23
claudin 23
NM_194284.2
0.0211


11743497_at
BMP2
bone morphogenetic protein 2
BX101090
0.021788


11718874_s_at
ATP2A2
ATPase, Ca++ transporting, cardiac
NM_170665.3
0.0218




muscle, slow twitch 2




11721216_s_at
TMEM106B
transmembrane protein 106B
AA789109
0.021968


11718006_a_at
MYLIP
myosin regulatory light chain
BC002860.2
0.02198




interacting protein




11719104_s_at
CPNE3
copine III
BC066597.1
0.022194


11723130_a_at
ARHGEF7
Rho guanine nucleotide exchange
NM_003899.3
0.022803




factor (GEF) 7




11757700_a_at
NDFIP2
Nedd4 family interacting protein 2
AA521251
0.022979


11718081_a_at
ATP2B4
ATPase, Ca++ transporting, plasma
NM_001001396.1
0.023666




membrane 4




11748034_a_at
CMAH
cytidine monophosphate-N-
D86324.1
0.02381




acetylneuraminic acid hydroxylase






(CMP-N-acetylneuraminate






monooxygenase) pseudogene




11740148_x_at
ZNF429
zinc finger protein 429
NM_001001415.2
0.023983


11716408_a_at
MET
met proto-oncogene (hepatocyte
NM_001127500.1
0.024171




growth factor receptor)




11720082_at
CBX6
chromobox homolog 6
NM_014292.3
0.024178


11733076_x_at
PPP1R12A
protein phosphatase 1, regulatory
AK314193.1
0.024224




(inhibitor) subunit 12A




11743280_a_at
WNK1
WNK lysine deficient protein kinase 1
BC013629.2
0.024246


11719028_a_at
PSD3
pleckstrin and Sec7 domain
DB314358
0.024644




containing 3




11757869_s_at
AKAP13
A kinase (PRKA) anchor protein 13
BE504033
0.024753


11722290_a_at
ZBTB43
zinc finger and BTB domain
AI745225
0.024875




containing 43




11743865_s_at
ATP2B1
ATPase, Ca++ transporting, plasma
AI337321
0.025057




membrane 1




11734994_s_at
SKI
v-ski sarcoma viral oncogene
NM_003036.3
0.025378




homolog (avian)




11731857_x_at
MT1H
metallothionein 1H
NM_005951.2
0.026268


11758247_x_at
ARL4D
ADP-ribosylation factor-like 4D
BM719529
0.026757


11731787_x_at
ERC1
ELKS/RAB6-interacting/CAST family
NM_178037.1
0.026811




member 1
















TABLE 10







Type I Epidermis; Down-regulated











GeneTitan_ID
Gene
Title
Public ID
p





11763233_x_at
TRAC
T cell receptor alpha constant
EU427374.1
0.000086


11750712_a_at
SEMA4A
sema domain, immunoglobulin
AK296693.1
0.000205




domain (Ig), transmembrane






domain (TM) and short






cytoplasmic domain,






(semaphorin) 4A




11743350_a_at
C15orf48
chromosome 15 open reading
CA309087
0.000277




frame 48




11723817_at
ARHGAP29
Rho GTPase activating protein 29
BU620659
0.000376


11723854_at
SAMD9
sterile alpha motif domain
NM_017654.2
0.000398




containing 9




11754862_a_at
RARRES2
retinoic acid receptor
AK092804.1
0.000534




responder (tazarotene induced) 2




11729515_a_at
SLC26A9
solute carrier family 26,
NM_052934.3
0.001204




member 9




11748896_s_at
CCRL1
chemokine (C-C motif)
AK304461.1
0.001209




receptor-like 1




11761960_x_at
TRAV20
T cell receptor alpha variable 20
AY532913.1
0.001367


11741285_a_at
CCRL1
chemokine (C-C motif)
BC069438.1
0.00144




receptor-like 1




11754482_a_at
PSMB1
proteasome (prosome,
BQ006450
0.001693




macropain) subunit, beta type, 1




11754184_a_at
ALDH1A3
aldehyde dehydrogenase 1
BX538027.1
0.001883




family, member A3




11726829_at
TYW1B
tRNA-yW synthesizing protein 1
NM_001145440.1
0.001956




homolog B (S.cerevisiae)




11725368_at
LRG1
leucine-rich alpha-2-
NM_052972.2
0.001997




glycoprotein 1




11723561_x_at
C11orf75
chromosome 11 open reading
NM_020179.2
0.002048




frame 75




11734507_s_at
MECOM
MDS1 and EVI1 complex locus
AK292865.1
0.002142


11716805_s_at
PLEKHA2
pleckstrin homology domain
NM_021623.1
0.002256




containing, family A






(phosphoinositide binding






specific) member 2




11754057_x_at
CRABP2
cellular retinoic acid binding
BT019827.1
0.00239




protein 2




11737108_a_at
CCRL1
chemokine (C-C motif)
NM_178445.1
0.002438




receptor-like 1




11720080_at
NTRK2
neurotrophic tyrosine kinase,
NM_001007097.1
0.002467




receptor, type 2




11715767_s_at
ACAA2
acetyl-CoA acyltransferase 2
NM_006111.2
0.002477


11715670_a_at
IFITM1
interferon induced
NM_003641.3
0.002619




transmembrane protein 1 (9-27)




11735937_a_at
CD48
CD48 molecule
NM_001778.2
0.002662


11746503_a_at
EHF
ets homologous factor
AF203977.1
0.00321


11736806_at
GABRA4
gamma-aminobutyric acid
NM_000809.2
0.003627




(GABA) A receptor, alpha 4




11720157_at
GDA
guanine deaminase
AK295716.1
0.003854


11720132_a_at
SPIRE1
spire homolog 1 (Drosophila)
BC125206.1
0.003917


11725832_s_at
OTUB2
OTU domain, ubiquitin
NM_023112.3
0.004105




aldehyde binding 2




11717763_a_at
MGLL
monoglyceride lipase
BC006230.2
0.004157


11756683_a_at
CD1E
CD1e molecule
AK311643.1
0.004158


11728008_x_at
FUT3
fucosyltransferase 3
NM_000149.3
0.004308




(galactoside 3(4)-L-






fucosyltransferase, Lewis blood






group)




11750244_a_at
MGLL
monoglyceride lipase
AK304844.1
0.004332


11724346_a_at
IFIH1
interferon induced with
NM_022168.2
0.004365




helicase C domain 1




11750245_x_at
MGLL
monoglyceride lipase
AK304844.1
0.004459


11758377_s_at
TLR1
toll-like receptor 1
BU623316
0.004771


11740897_a_at
TREX2
three prime repair exonuclease 2
NM_080701.3
0.004847


11718077_s_at
MAPKAPK3
mitogen-activated protein
NM_004635.3
0.004908




kinase-activated protein kinase 3




11763697_s_at
SNHG9
small nucleolar RNA host gene
AW958849
0.004956




9 (non-protein coding)




11719591_s_at
GLTP
glycolipid transfer protein
NM_016433.3
0.005188


11715671_x_at
IFITM1
interferon induced
NM_003641.3
0.005216




transmembrane protein 1 (9- 27)




11725641_at
EFHD2
EF-hand domain family,
CB240768
0.005381




member D2




11727633_at
SLC16A10
solute carrier family 16,
BC066985.1
0.005429




member 10 (aromatic amino






acid transporter)




11717764_x_at
MGLL
monoglyceride lipase
BC006230.2
0.005967


11750324_a_at
GAS7
growth arrest-specific 7
AK293755.1
0.006052


11735833_a_at
KIAA1199
KIAA1199
NM_018689.1
0.006555


11757367_s_at
HSPA7
heat shock 70 kDa protein 7
BM677874
0.006575




(HSP70B)




11741263_s_at
LTBP1
latent transforming growth
M34057.1
0.006584




factor beta binding protein 1




11723235_a_at
IFI44L
interferon-induced protein 44-like
AB000115.1
0.006657


11729692_a_at
SERPINB3
serpin peptidase inhibitor,
EU852041.1
0.006806




clade B (ovalbumin), member 3




11727385_a_at
PCCA
propionyl CoA carboxylase,
NM_000282.2
0.006811




alpha polypeptide




11729742_x_at
IFI27L2
interferon, alpha-inducible
NM_032036.2
0.006823




protein 27-like 2




11731973_at
SCNN1G
sodium channel, nonvoltage-
NM_001039.3
0.00716




gated 1, gamma




11743404_at
ZMAT2
zinc finger, matrin-type 2
BM450158
0.007256


11736058_s_at
C10orf32
chromosome 10 open reading
NM_001136200.1
0.007371




frame 32




11715239_x_at
IFITM3
interferon induced
g148612841
0.007374




transmembrane protein 3 (1-8U)




11726154_at
CA6
carbonic anhydrase VI
NM_001215.2
0.007409


11718850_a_at
SRPK1
SRSF protein kinase 1
AK299591.1
0.007419


11729693_at
SERPINB3
serpin peptidase inhibitor,
EU852041.1
0.007514




clade B (ovalbumin), member 3




11755950_a_at

coiled-coil domain containing 71
AK098658.1
0.007621


11740349_at
RNASE7
ribonuclease, RNase A family, 7
BC112334.1
0.007692


11757300_s_at
ELOVL5
ELOVL family member 5,
AL576414
0.007702




elongation of long chain fatty






acids (FEN1/Elo2, SUR4/Elo3-






like, yeast)




11725310_at
CRISP3
cysteine-rich secretory protein 3
NM_006061.1
0.007915


11723490_at
GCLM
glutamate-cysteine ligase,
BC041809.1
0.008288


11757595_x_at
CRABP2
cellular retinoic acid binding
BU631189
0.008352




protein 2




11752101_s_at
EIF2S1
eukaryotic translation initiation
BC002513.2
0.008373




factor 2, subunit 1 alpha, 35 kDa




11737496_a_at
CD200R1
CD200 receptor 1
NM_170780.2
0.008378


11749745_a_at
SRP68
signal recognition particle
AK301100.1
0.008462




68 kDa




11718142_a_at
TTC27
tetratripeptide repeat
NM_017735.3
0.00876




domain 27




11737432_a_at
PAPL
iron/zinc purple acid
BC136722.1
0.008796




phosphatase-like-protein




11753762_x_at
KLK6
kallikrein-related peptidase 6
AY457039.1
0.008902


11725875_at
WDR66
WD repeat domain 66
NM_144668.4
0.008916


11729694_s_at
SERPINB4
serpin peptidase inhibitor,
EU852041.1
0.009199




clade B (ovalbumin), member 4




11763184_at
IDE
insulin-degrading enzyme
BQ006777
0.009364


11737743_a_at
ARSF
arylsulfatase F
NM_004042.3
0.009395


11724785_x_at
MRPS18C
mitochondrial ribosomal
BC005186.1
0.009553




protein S18C




11723899_a_at
DHRS9
dehydrgenase/reductase (SDR
NM_005771.4
0.009689




family) member 9




11743805_s_at
MRPL42
mitochondrial ribosomal
DB379276
0.009847




protein L42




11758083_s_at
HPGD
hydroxyprostaglandin
AI743714
0.009851




dehydrogenase 15-(NAD)




11727995_a_at
SPINKS
serine peptidase inhibitor
DQ149928.1
0.010277




Kazal type 5




11727208_x_at
DDHD1
DDHD domain containing 1
NM_030637.1
0.010297


11737431_x_at
PAPL
iron/zinc purple acid
NM_001004318.2
0.010375




phosphatase-like protein




11720510_a_at
APOBEC3G
apolopoprotein B mRNA editing
NM_021822.2
0.010471




enzyme, catalytic polypeptide-






like 3G




11719503_a_at
DHX36
DEAH (Asp-Glu-Ala-His) box
NM_020865.2
0.010702




polypeptide 36




11753152_x_at
CFLAR
CASP8 and FADD-like apoptosis
AK297387.1
0.010705




regulator




11726289_at
GRAMD3
GRAM domain containing 3
BC008590.1
0.010722


11722661_at
NFE2L3
nuclear factor (erythroid-
NM_004289.6
0.010893




derived 2)-like 3




11716743_s_at
TJP2
tight junction protein 2 (zona
NM_004817.2
0.011228




occludens 2)




11726894_a_at
IRAK3
interleukin-1 receptor-
BG929347
0.011364




associated kinase 3




11753202_s_at
SERPINB4
serpin peptidase inhibitor,
AB046400.1
0.011604




clade B (ovalbumin), member 4




11739292_at
EHF
ets homologous factor
NM_012153.3
0.012013


11748253_a_at
SLC5A1
solute carrier family 5
AK297665.1
0.01209




(sodium/glucose






cotransporter), member 1




11723953_a_at
CLINT1
clathrin interactor 1
NM_014666.2
0.01254


11736117_a_at
ZFAND5
zinc finger, AN1-type domain 5
AF062346.1
0.012593


11724795_at
ZG16B
zymogen granule protein 16
NM_145252.2
0.013029




homolog B (rat)




11717765_a_at
MGLL
monoglyceride lipase
NM_007283.5
0.01317


11744194_a_at
ABCC3
ATP-binding cassette, sub-
CB055248
0.013406




family C (CFTR/MRP), member 3




11746088_a_at
IFI44
interferon-induced protein 44
DB350079
0.013466


11733533_at
CYP4F22
cytochrome P450, family 4,
NM_173483.3
0.013708




subfamily F, polypeptide 22




11746581_a_at
PCCA
propionyl CoA carboxylase,
AK298318.1
0.013745




alpha polypeptide




11717981_a_at
ACP5
acid phosphatase 5, tartrate
NM_001611.3
0.014935




resistant
















TABLE 11







Type I Dermis; Up-regulated











GeneTitan_ID
Gene
Title
Public ID
p





11733167_at
LRRN4CL
LRRN4 C-terminal like
BC053902.1
0.000112


11720616_a_at
DNM1
dynamin 1
NM_001005336.1
0.000113


11758194_s_at
DPP4
dipeptidyl-peptidase 4
AI768728
0.000125


11759481_at
COPB1
Coatomer protein complex,
AU143964
0.000148




subunit beta 1




11718627_at
TRAK1
trafficking protein, kinesin
CA415544
0.000173




binding 1




11739544_a_at
C19orf12
chromosome 19 open reading
BX328123
0.000234




frame 12




11743191_a_at
NTM
neurotrimin
AI343272
0.000278


11731649_x_at
NTM
neurotrimin
AY358331.1
0.000343


11723111_a_at
EMILIN2
elastin microfibril interfacer 2
NM_032048.2
0.000384


11719422_s_at
ABCC1
ATP-binding cassette, sub-
NM_004996.3
0.000385




family C (CFTR/MRP),






member 1




11739527_a_at
SECTM1
secreted and transmembrane 1
CR614987.1
0.000402


11758810_at
COL14A1
collagen, type XIV, alpha 1
NM_021110.1
0.000451


11724441_x_at
PTGIS
prostaglandin I2
NM_000961.3
0.000458




(prostacyclin) synthase




11747944_a_at
PPFIA2
protein tyrosine phosphatase,
AK296380.1
0.000483




receptor type, f polypeptide






(PTPRF), interacting protein






(liprin), alpha 2




11728451_a_at
PCOLCE2
procollagen C-endopeptidase
NM_013363.2
0.000493




enhancer 2




11736086_a_at
HHIP
hedgehog interacting protein
NM_022475.1
0.000511


11758252_s_at
HSD3B7
hydroxy-delta-5-steroid
CB115219
0.000562




dehydrogenase, 3 beta- and






steroid delta-isomerase 7




11756706_a_at
DPP4
dipeptidyl-peptidase 4
AK314798.1
0.000563


11720690_a_at
C2orf18
chromosome 2 open reading
NM_017877.3
0.000604




frame 18




11724619_at
RSPO3
R-spondin 3 homolog
NM_032784.3
0.000676




(Xenopuslaevis)




11743447_a_at
BICD2
bicaudal D homolog 2
AW409827
0.000721




(Drosophila)




11725773_a_at
TBC1D24
TBC1 domain family, member 24
NM_020705.1
0.000726


11715704_x_at
ITGA5
integrin, alpha 5 (fibronectin
NM_002205.2
0.000766




receptor, alpha polypeptide)




11756007_a_at
HHIP
hedgehog interacting protein
AK024645.1
0.000889


11741377_a_at
MMP2
matrix metallopeptidase 2
NM_001127891.1
0.000928




(gelatinase A, 72 kDa






gelatinase, 72 kDa type IV






collagenase)




11734550_x_at
TGFBI
transforming growth factor,
NM_000358.2
0.000963




beta-induced, 68 kDa




11730405_at
MEX3B
mex-3 homolog B (C.elegans)
BC111545.1
0.000968


11731648_a_at
NTM
neurotrimin
AY358331.1
0.000985


11740103_a_at
MAFG
v-maf musculoaponeurotic
BX427058
0.001077




fibrosarcoma oncogene






homolog G (avian)




11727783_s_at
TPM4
tropomyosin 4
NM_003290.2
0.001163


11718269_x_at
ANGPTL2
angiopoietin-like 2
AY358274.1
0.001231


11725897_at
TUBB1
tubulin, beta 1
BC033679.1
0.001234


11717803_a_at
NTN4
netrin 4
NM_021229.3
0.001243


11754476_x_at
DNM1
dynamin 1
BQ183716
0.00125


11746893_a_at
MPP1
membrane protein,
AK304538.1
0.001254




palmitoylated 1, 55 kDa




11753088_a_at
MCTP1
multiple C2 domains,
AK297325.1
0.001305




transmembrane 1




11717568_s_at
NQ01
NAD(P)H dehydrogenase,
NM_000903.2
0.001408




quinone 1




11720051_at
SPOCK1
sparc/osteonectin, cwcv and
NM_004598.3
0.001423




kazal-like domains






proteoglycan (testican) 1




11757921_s_at
COL14A1
collagen, type XIV, alpha 1
AI248460
0.001424


11725923_s_at
ASAP2
ArfGAP with SH3 domain,
NM_001135191.1
0.001457




ankyrin repeat and PH






domain 2




11723225_a_at
CLDN11
claudin 11
BC013577.1
0.001495


11754368_a_at
FBN1
fibrillin 1
AB208840.1
0.001626


11758062_s_at
STK32B
serine/threonine kinase 32B
AI401203
0.001735


11740358_a_at
LILRB5
leukocyte immunoglobulin-
NM_001081443.1
0.001775




like receptor, subfamily B






(with TM and ITIM domains),






member 5




11746200_s_at
EHD2
EH-domain containing 2
AK097126.1
0.001844


11747945_x_at
PPFIA2
protein tyrosine phosphatase,
AK296380.1
0.002036




receptor type, f polypeptide






(PTPRF), interacting protein






(liprin), alpha 2




11720811_a_at
PAMR1
peptidase domain containing
NM_015430.2
0.002139




associated with muscle






regeneration 1




11731716_at
CCBP2
chemokine binding protein 2
NM_001296.4
0.002156


11754706_a_at
HHIP
hedgehog interacting protein
AK098525.1
0.002166


11722940_a_at
SRGAP2
SLIT-ROBO Rho GTPase
NM_001042758.1
0.00222




activating protein 2




11724848_a_at
DIXDC1
DIX domain containing 1
DB358954
0.002285


11718842_a_at
C16orf62
chromosome 16 open reading
BC058845.1
0.002303




frame 62




11734549_s_at
TGFBI
transforming growth factor,
NM_000358.2
0.002382




beta-induced, 68 kDa




11734548_a_at
TGFBI
transforming growth factor,
NM_000358.2
0.002425




beta-induced, 68 kDa




11731650_a_at
NTM
neurotrimin
NM_001048209.1
0.002477


11738845_x_at
NTM
neurotrimin
NM_001144059.1
0.002642


11726905_a_at
ARHGAP20
Rho GTPase activating protein 20
NM_020809.2
0.002644


11724735_a_at
PDPN
podoplanin
BC014668.1
0.002735


11755796_a_at
ADAM9
ADAM metallopeptidase
BC143924.1
0.002822




domain 9




11726017_a_at
C17orf63
chromosome 17 open reading
AU253346
0.002907




frame 63




11741286_a_at
CCRL1
chemokine (C-C motif)
AF110640.1
0.002908




receptor-like 1




11743910_at
FAM69A
family with sequence
BQ015316
0.002927




similarity 69, member A




11756911_a_at
C1QTNF3
C1q and tumor necrosis factor
BX640995.1
0.002969




related protein 3




11746361_a_at
C7orf58
chromosome 7 open reading
BC030538.2
0.002971




frame 58




11715703_s_at
ITGA5
integrin, alpha 5 (fibronectin
NM_002205.2
0.002995




receptor, alpha polypeptide)




11735913_s_at
TNXB
tenascin XB
BC125114.1
0.003064


11730236_s_at
MYADM
myeloid-associated
AY358582.1
0.003084




differentiation marker




11718267_a_at
ANGPTL2
angiopoietin-like 2
NM_012098.2
0.003114


11723217_x_at
SFXN3
sideroflexin 3
NM_030971.3
0.003152


11720286_a_at
TRAK1
trafficking protein, kinesin
BC015922.1
0.003236




binding 1




11717133_a_at
MAFG
v-maf musculoaponeurotic
BF340448
0.003272




fibrosarcoma oncogene






homolog G (avian)




11717340_at
PTGFRN
prostaglandin F2 receptor
NM_020440.2
0.003311




negative regulator




11729541_a_at
CAMKK2
calcium/calmodulin-
AB081337.1
0.003359




dependent protein kinase






kinase 2, beta




11718268_a_at
ANGPTL2
angiopoietin-like 2
AY358274.1
0.003373


11717413_a_at
WIPI1
WD repeat domain,
NM_017983.5
0.003406




phosphoinositide interacting 1




11716226_a_at
LIMA1
LIM domain and actin binding 1
BC136763.1
0.003456


11740588_at
BDKRB2
bradykinin receptor B2
NM_000623.3
0.003464


11741128_a_at
CAPN2
calpain 2, (m/II) large subunit
NM_001146068.1
0.003473


11717891_a_at
ECM1
extracellular matrix protein 1
BC023505.2
0.003509


11730385_at
GREM2
gremlin 2
BG150451
0.003541


11756245_s_at
ANXA5
annexin A5
CR607543.1
0.003586


11721499_x_at
CTSA
cathepsin A
NM_001127695.1
0.003681


11717757_s_at
RALA
v-ral simian leukemia viral
AA548928
0.003773




oncogene homolog A (ras






related)




11723075_a_at
BCL9L
B-cell CLL/lymphoma 9-like
AY296059.1
0.003835


11748650_a_at
ADAM33
ADAM metallopeptidase
BC125113.1
0.003846




domain 33




11758676_s_at
RHOQ
ras homolog gene family,
R23125
0.003853




member Q




11724260_a_at
TRIO
triple functional domain
AF091395.1
0.004049




(PTPRF interacting)




11724541_s_at
VWF
von Willebrand factor
NM_000552.3
0.004078


11716549_s_at
ISLR
immunoglobulin superfamily
NM_005545.3
0.0042




containing leucine-rich repeat




11724228_at
RBMS1
RNA binding motif, single
BC080620.1
0.004204




stranded interacting protein 1




11752423_a_at
F13A1
coagulation factor XIII, A1
AK304335.1
0.004293




polypeptide




11757340_s_at
RHOQ
ras homolog gene family,
BM677515
0.004317




member Q




11750650_a_at
PAMR1
peptidase domain containing
AK297092.1
0.004367




associated with muscle






regeneration 1




11735263_s_at
SCN2A
sodium channel, voltage-
NM_001040142.1
0.004453




gated, type II, alpha subunit




11731682_at
CD70
CD70 molecule
NM_001252.3
0.004492


11737108_a_at
CCRL1
chemokine (C-C motif)
NM_178445.1
0.004501




receptor-like 1




11743251_s_at
MMP2
matrix metallopeptidase 2
BX357054
0.004507




(gelatinase A, 72 kDa






gelatinase, 72 kDa type IV






collagenase)




11727782_a_at
TPM4
tropomyosin 4
NM_003290.2
0.004515


11755955_a_at
FAP
fibroblast activation protein,
AL832166.1
0.004528




alpha




11725868_at
SSC5D
scavenger receptor cysteine-
NM_001144950.1
0.004768




rich glycoprotein
















TABLE 12







Type I Dermis; Down-regulated











GeneTitan_ID
Gene
Title
Public ID
p





11718273_a_at
EIF3L
eukaryotic translation
NM_016091.2
0.000001




initiation factor 3, subunit L




11729152_a_at
EIF3M
eukaryotic translation
NM_006360.3
0.000006




initiation factor 3, subunit M




11755203_x_at
RPL21
ribosomal protein L21
BX647669.1
0.000006


11757356_x_at
RPL30
ribosomal protein L30
BM855760
0.000008


11717236_x_at
RPS7
ribosomal protein S7
NM_001011.3
0.000009


11745362_x_at
RPS11
ribosomal protein S11
BC100025.1
0.000009


11757363_x_at
RPS15A
ribosomal protein S15a
DB313157
0.000009


200062_PM_s_at
RPL30
ribosomal protein L30
L05095.1
0.000009


11716092_x_at
CKS1B
CDC28 protein kinase
NM_001826.2
0.00001




regulatory subunit 1B




11743094_at
SPRR4
small proline-rich protein 4
BC069445.1
0.000011


11757421_x_at
RPL31
ribosomal protein L31
CD687230
0.000011


11718274_s_at
EIF3L
eukaryotic translation
NM_016091.2
0.000012




initiation factor 3, subunit L




11715376_a_at
RPS11
ribosomal protein S11
NM_001015.3
0.000015


11757773_x_at
NCRNA00275
non-protein coding RNA 275
BF185165
0.000015


11753659_x_at
RPL30
ribosomal protein L30
BC095426.1
0.000016


11753694_x_at
RPS15A
ribosomal protein S15a
AB062400.1
0.000017


11755956_x_at
POLE3
polymerase (DNA directed),
AF070640.1
0.000017




epsilon 3 (p17 subunit)




200063_PM_s_at
NPM1
nucleophosmin (nucleolar
BC002398.1
0.000017




phosphoprotein B23,






numatrin)




11740643_a_at
CYP4F8
cytochrome P450, family 4,
AF133298.1
0.00002




subfamily F, polypeptide 8




11757305_x_at
RPSAP58
ribosomal protein SA
BI762726
0.000021




pseudogene 58




11715958_s_at
RPL7
ribosomal protein L7
NM_000971.3
0.000023


11719783_at
RPS23
ribosomal protein S23
D14530.1
0.000027


11745154_a_at
NCL
nucleolin
BC006516.2
0.000027


11720183_s_at
EEF1B2
eukaryotic translation
NM_001959.3
0.000029




elongation factor 1 beta 2




11753691_x_at
RPL24
ribosomal protein L24
CR456729.1
0.000031


200013_PM_at
RPL24
ribosomal protein L24
NM_000986.1
0.000034


11718275_x_at
EIF3L
eukaryotic translation
NM_016091.2
0.000037




initiation factor 3, subunit L




11744326_s_at
RPL37
ribosomal protein L37
BC079477.1
0.000037


11757264_s_at
RPS3
ribosomal protein S3
BU588459
0.000038


200010_PM_at
RPL11
ribosomal protein L11
NM_000975.1
0.000039


11757027_x_at
RPL31
ribosomal protein L31
CR600452.1
0.000042


200018_PM_at
RPS13
ribosomal protein S13
NM_001017.1
0.000046


11757375_x_at
RPS15
ribosomal protein S15
AI625563
0.000047


11754031_s_at
CKS1B
CDC28 protein kinase
BT007196.1
0.000051




regulatory subunit 1B




11715733_a_at
NIPSNAP1
nipsnap homolog 1 (C.
NM_003634.2
0.000054




elegans)




11740644_x_at
CYP4F8
cytochrome P450, family 4,
AF133298.1
0.000061




subfamily F, polypeptide 8




11736188_a_at
ORMDL3
ORM1-like 3 (S. cerevisiae)
NM_139280.1
0.000071


11730527_a_at
DAPK2
death-associated protein
AF052941.1
0.000088




kinase 2






peroxisomal membrane




11723312_a_at
PXMP2
protein 2, 22kDa
NM_018663.1
0.000092


11734833_s_at
TAF9B
TAF9B RNA polymerase II,
NM_015975.4
0.000093




TATA box binding protein






(TBP)-associated factor,






31kDa




11732205_x_at
NAP1L1
nucleosome assembly
BX413854
0.000099




protein 1-like 1




11752912_x_at
EIF3M
eukaryotic translation
AK292139.1
0.000099




initiation factor 3, subunit M




11756437_x_at
RPS18
ribosomal protein S18
BQ057441
0.0001


11729011_at
CDH22
cadherin 22, type 2
NM_021248.1
0.000107


11734329_at
TNN
tenascin N
NM_022093.1
0.000107


11749558_a_at
CYP4F8
cytochrome P450, family 4,
AK300530.1
0.000119




subfamily F, polypeptide 8




200029_PM_at
RPL19
ribosomal protein L19
NM_000981.1
0.000121


11757386_x_at
NPM1
nucleophosmin (nucleolar
AL563600
0.000122




phosphoprotein B23,






numatrin)




11733774_a_at
RPL37
ribosomal protein L37
NM_000997.4
0.000123


11729427_a_at
GLI1
GLI family zinc finger 1
NM_005269.2
0.000126


11754066_x_at
NPM1
nucleophosmin (nucleolar
BT007011.1
0.000128




phosphoprotein B23,






numatrin)




11715626_a_at
RPL11
ribosomal protein L11
NM_000975.2
0.00013


11757489_x_at
RPL22
ribosomal protein L22
AW268528
0.00013


11757355_x_at
RPL41
ribosomal protein L41
BU958994
0.000138


11752726_x_at
GNB2L1
guanine nucleotide binding
AY159316.1
0.000144




protein (G protein), beta






polypeptide 2-like 1




11728288_a_at
KRT15
keratin 15
NM_002275.3
0.000153


11756783_a_at
TF
transferrin
BC045772.1
0.000155


11757331_x_at
RPL13A
ribosomal protein L13a
BF688481
0.000157


11744365_a_at
NCRNA00275
non-protein coding RNA 275
AY513722.1
0.000159


11739727_x_at
NAP1L1
nucleosome assembly
BE965760
0.00016




protein 1-like 1




200074_PM_s_at
RPL14
ribosomal protein L14
U16738.1
0.000161


200089_PM_s_at
RPL4
ribosomal protein L4
AI953886
0.000162


11734331_a_at
TNN
tenascin N
BC136619.1
0.000163


11757906_x_at
RPL10
ribosomal protein L10
AL558950
0.000167


11715645_s_at
C22orf28
chromosome 22 open
NM_014306.4
0.00018




reading frame 28




11756875_x_at
COMMD6
COMM domain containing 6
CR603325.1
0.000184


11722318_a_at
EFNB3
ephrin-B3
NM_001406.3
0.000198


11756878_a_at
FBL
fibrillarin
CR593763.1
0.000198


11736721_x_at
RPL32
ribosomal protein L32
NM_001007073.1
0.000199


11720184_x_at
EEF1B2
eukaryotic translation
NM_001959.3
0.0002




elongation factor 1 beta 2




11749786_x_at
HNRNPF
heterogeneous nuclear
AK296696.1
0.000201




ribonucleoprotein F




11717058_x_at
RPL5
ribosomal protein L5
NM_000969.3
0.00021


11752911_a_at
EIF3M
eukaryotic translation
AK292139.1
0.000211




initiation factor 3, subunit M




11730790_x_at
NPM1
nucleophosmin (nucleolar
AK290652.1
0.000213




phosphoprotein B23,






numatrin)




11753680_x_at
RPL21
ribosomal protein L21
CR457032.1
0.000213


200022_PM_at
RPL18
ribosomal protein L18
NM_000979.1
0.000213


200014_PM_s_at
HNRNPC
heterogeneous nuclear
NM_004500.1
0.000215




ribonucleoprotein C (C1/C2)




11742667_x_at
RPS28
ribosomal protein S28
NM_001031.4
0.000242


200082_PM_s_at
RPS7
ribosomal protein S7
AI805587
0.00025


11728380_x_at
NACA2
nascent polypeptide-
NM_199290.2
0.000252




associated complex alpha






subunit 2




11756140_s_at
RPL4
ribosomal protein L4
BX447218
0.000254


11716304_a_at
ABHD14B
abhydrolase domain
NM_032750.2
0.000267




containing 14B




11758357_x_at
RPL9
ribosomal protein L9
BF172613
0.000272


11715280_s_at
KRT17
keratin 17
g197383031
0.000274


11739813_a_at
FZD1
frizzled homolog 1
BF675672
0.000295




(Drosophila)




11721885_s_at
CDC42
cell division cycle 42 (GTP
NM_001039802.1
0.000307




binding protein, 25kDa)




11720954_s_at
RPL30
ribosomal protein L30
NM_000989.2
0.000309


11743688_at
GLI2
GLI family zinc finger 2
AB209354.1
0.000312


11720599_s_at
SUB1
SUB1 homolog
NM_006713.3
0.000315




(S. cerevisiae)




11725875_at
WDR66
WD repeat domain 66
NM_144668.4
0.000318


11733496_x_at
COMMD6
COMM domain containing 6
AA535445
0.000323


11727795_x_at
EIF3E
eukaryotic translation
NM_001568.2
0.000327




initiation factor 3, subunit E




11756215_x_at
UBA52
ubiquitin A-52 residue
BU619323
0.000331




ribosomal protein fusion






product 1




11757059_x_at
RPL36A
ribosomal protein L36a
CR617894.1
0.000331


200012_PM_x_at
RPL21
ribosomal protein L21
NM_000982.1
0.000335


11718344_a_at
CNOT7
CCR4-NOT transcription
NM_013354.5
0.00035




complex, subunit 7




11717235_s_at
RPS7
ribosomal protein S7
NM_001011.3
0.000352


11757113_a_at
SNHG1
small nucleolar RNA host
6E836747
0.000365




gene 1 (non-protein coding)




11743679_a_at
PTCH1
patched 1
DB299015
0.000374


11744366_a_at
NCRNA00275
non-protein coding RNA 275
CR936805.1
0.000378
















TABLE 13







Type II Epidermis; Up-regulated











GeneTitan_ID
Gene
Title
Public ID
p





11729461_a_at
CTNS
cystinosis, nephropathic
NM_001031681.2
0.000105


11737824_a_at
STX16
syntaxin 16
NM_001134773.1
0.000753


11731828_at
GPC2
glypican 2
NM_152742.1
0.000819


11757259_x_at
SCARNA9L
small Cajal body-specific
NR_023358.1
0.000852




RNA 9-like






(retrotransposed)




11728498_a_at
SVIL
supervillin
NM_003174.3
0.001387


11733298_a_at
VIPR1
vasoactive intestinal
NM_004624.3
0.00166




peptide receptor 1




11754972_s_at
BAZ2A
bromodomain adjacent to
AK127775.1
0.001742




zinc finger domain, 2A




11732899_s_at
SULT1AI
sulfotransferase family,
NM_177528.1
0.001887




cytosolic, 1A, phenol-






preferring, member 1




11716708_a_at
DDR1
discoidin domain receptor
NM_013993.2
0.001925




tyrosine kinase 1




11757623_s_at
RNF5
ring finger protein 5
AA923467
0.00209


11715799_s_at
BAT2L1
HLA-B associated
NM_013318.3
0.002325




transcript 2-like 1




11756190_a_at
CLK3
CDC-like kinase 3
CD743118
0.002384


11726634_a_at
MYST3
MYST histone
NM_001099412.1
0.002824




acetyltransferase






(monocytic leukemia) 3




11752331_s_at
SULT1A4
sulfotransferase family,
BC111011.1
0.002837




cytosolic, 1A, phenol-






preferring, member 4




11731093_s_at
BRD1
bromodomain containing
NM_014577.1
0.002905




1




11744831_a_at
RPAIN
RPA interacting protein
AY775316.1
0.002976


11744173_x_at
DNAJC4
DnaJ (Hsp40) homolog,
BQ267791
0.00329




subfamily C, member 4




11723546_s_at
PLD1
phospholipase D1,
BF434088
0.003418




phosphatidylcholine-






specific




11732589_a_at
ZNF467
zinc finger protein 467
NM_207336.1
0.004153


11721165_a_at
KHNYN
KH and NYN domain
NM_015299.2
0.00435




containing




11730324_s_at
SLC38A9
solute carrier family 38,
NM_173514.2
0.004534




member 9




11739669_at
SS18L1
synovial sarcoma
AB014593.1
0.004553




translocation gene on






chromosome 18-like 1




11758140_s_at
CPSF6
cleavage and
BU689332
0.004569




polyadenylation specific






factor 6, 68kDa




11721912 at
MDM4
Mdm4 p53 binding
NM_002393.3
0.004611




protein homolog (mouse)




11744830_x_at
NPIPL3
nuclear pore complex
AK303166.1
0.004653




interacting protein-like 3




11729100_a_at
TTC18
tetratricopeptide repeat
NM_145170.3
0.004727




domain 18




11757896_s_at
C1orf63
chromosome 1 open
R81538
0.004766




reading frame 63




11715976_a_at
VGLL4
vestigial like 4
NM_001128219.1
0.004868




(Drosophila)




11729196_a_at
STX16
syntaxin 16
6E782754
0.004954


11758055_x_at
RGPD8
RANBP2-like and GRIP
BQ005433
0.005005




domain containing 8




11721624_s_at
WSB1
WD repeat and SOCS box-
NM_015626.8
0.005017




containing 1




11720589_s_at
PHF21A
PHD finger protein 21A
BU733437
0.005058


11720895_at
SOS1
son of seven less homolog
BM970418
0.005891




1 (Drosophila)




11761133_at
KDM5C
lysine (K)-specific
EF613277.1
0.006011




demethylase 5C




11726189_x_at
HCFC1R1
host cell factor C1
NM_017885.2
0.006166




regulator 1 (XPO1






dependent)




11721598_a_at
EFS
embryonal Fyn-associated
NM_032459.1
0.006547




substrate




11745431_a_at
SVIL
supervillin
BC092440.1
0.006666


11740447_x_at
BTN3A1
butyrophilin, subfamily 3,
NM_194441.2
0.006686




member Al




11726515_a_at
CLK4
CDC-like kinase 4
AF294429.1
0.006691


11746529_x_at
TNFRSF14
tumor necrosis factor
BC029848.1
0.006897




receptor superfamily,






member 14 (herpesvirus






entry mediator)




11759308_s_at
MAGI1
membrane associated
AL050184.1
0.006929




guanylate kinase, WW






and PDZ domain






containing 1




11749473_a_at
MEF2D
myocyte enhancer factor
BC040949.1
0.007372




2D




11719128_a_at
LMF2
lipase maturation factor 2
NM_033200.1
0.007569


11762365_x_at
KIAA0415
KIAA0415
AB007875.1
0.007605


11716129_at
IGF2R
insulin-like growth factor
NM_000876.2
0.007692




2 receptor




11717989_a_at
SUN1
Sad1 and UNC84 domain
NM_001130965.1
0.007807




containing 1




11755196_a_at
CORO6
coronin 6
AK092430.1
0.007848


11755758_s_at
NLRC5
NLR family, CARD domain
AK090439.1
0.00788




containing 5




11716283_at
PAPD7
PAP associated domain
NM_006999.3
0.008191




containing 7




11730449_a_at
DHRS12
dehydrogenase/reductase
NM_024705.1
0.008218




(SDR family) member 12




11718728_a_at
ZNF655
zinc finger protein 655
NM_001083956.1
0.008286


11718820_at
TSC1
tuberous sclerosis 1
NM_000368.3
0.008558


11729483_a_at
KLF8
Kruppel-like factor 8
NM_007250.4
0.008607


11754192_s_at
SRSF11
serine/arginine-rich
CR614713.1
0.009136




splicing factor 11




11758557_s_at
ZFP36L1
zinc finger protein 36,
AI758505
0.009209




C3H type-like 1




11723598_x_at
MAP2K7
mitogen-activated protein
NM_145185.2
0.009355




kinase kinase 7




11754541_a_at
CCDC45
coiled-coil domain
AW167096
0.00982




containing 45




11757630_s_at
HERPUD2
HERPUD family member 2
AA709265
0.010052


11718536_s_at
NKTR
natural killer-tumor
NM_005385.3
0.010291




recognition sequence




11755674_s_at
RALGAPAI
Ral GTPase activating
DQ786317.1
0.010335




protein, alpha subunit 1






(catalytic)




11757591_s_at
PAN3
PAN3 poly(A) specific
DB314869
0.010593




ribonuclease subunit






homolog (S. cerevisiae)




11724312_a_at
SH3BP2
SH3-domain binding
NM_001145855.1
0.010664




protein 2




11757197_s_at
NCRNA00201
non-protein coding RNA
NR_026778.1
0.010882




201




11759150_at
CNOT4
CCR4-NOT transcription
BC035590.1
0.011523




complex, subunit 4




11718939_s_at
TNFAIP3
tumor necrosis factor,
NM_006290.2
0.011563




alpha-induced protein 3




11738035_s_at
RTN4
reticulon 4
AK302741.1
0.011615


11719084_a_at
SMARCC2
SWI/SNF related, matrix
BF663402
0.011872




associated, actin






dependent regulator of






chromatin, subfamily c,






member 2




11736501_x_at
SS18
synovial sarcoma
NM_005637.2
0.011911




translocation,






chromosome 18




11755811_a_at
ZNF266
zinc finger protein 266
AL833503.1
0.012172


11720362_at
PHIP
pleckstrin homology
CR600369.1
0.012352




domain interacting






protein




11724758_s_at
GPBP1L1
GC-rich promoter binding
NM_021639.4
0.012429




protein 1-like 1






solute carrier family 38,




11754821_s_at
SLC38AI
member 1
AI476037
0.012431


11758907_at
ZNF827
zinc finger protein 827
AA031947
0.012473




trinucleotide repeat




11736498_a_at
TNRC6B
containing 6B
NM_015088.2
0.012866


11716010_s_at
DYNC1LI2
dynein, cytoplasmic 1,
NM_006141.2
0.01317




light intermediate chain 2




11745723_a_at
MALAT1
metastasis associated
BX538238.1
0.013758




lung adenocarcinoma






transcript 1 (non-protein






coding)




11758584_s_at
STYX
serine/threonine/tyrosine
N34305
0.013878




interacting protein




11757558_s_at
LONRF1
LON peptidase N-terminal
BF680438
0.014197




domain and ring finger 1




11750922_x_at
AMT
aminomethyltransferase
AK296177.1
0.0143


11718558_s_at
MKRN1
makorin ring finger
NM_001145125.1
0.014465




protein 1




11723112_a_at
CCDC84
coiled-coil domain






containing 84
NM_198489.1
0.014471


11757808_s_at
RERE
arginine-glutamic acid
BM706668
0.014565




dipeptide (RE) repeats




11763191_at
PRICKLE3
prickle homolog 3
AK303308.1
0.014697




(Drosophila)




11757821_s_at
LDB1
LIM domain binding 1
AW271288
0.014809


11755194_s_at
CCN L2
cyclin L2
AK000685.1
0.014941


11720122_at
GIGYF1
GRB10 interacting GYF
NM_022574.4
0.014956




protein 1






hypothetical protein




11763351_at
LOC286052
LOC286052
CK819455
0.014973


11722752_a_at
C14orf43
chromosome 14 open
NM_194278.3
0.015053




reading frame 43




11757958_s_at
POGZ
pogo transposable
AI374931
0.015063




element with ZNF domain




11734056_at
PTGR2
prostaglandin reductase 2
NM_152444.2
0.015377


11722715_at
STK35
serine/threonine kinase
NM_080836.2
0.015673




35




11722134_a_at
TNFRSF25
tumor necrosis factor
NM_148965.1
0.015688




receptor superfamily,






member 25




11715192_s_at
C7orf46
chromosome 7 open
g188219621
0.015694




reading frame 46




11720795_s_at
NUPL1
nucleoporin like 1
NM_014089.3
0.016154


11729510_a_at
WDR33
WD repeat domain 33
NM_001006623.1
0.016469


11724066_s_at
HCFC1R1
host cell factor C1
NM_001002018.1
0.016491




regulator 1 (XPO1






dependent)




11718534_at
NKTR
natural killer-tumor
AI361805
0.016611




recognition sequence




11741625_a_at
SLC22A23
solute carrier family 22,
NM_021945.5
0.016631




member 23




11722305_at
ARHGAP23
Rho GTPase activating
NM_020876.1
0.01665




protein 23




11764248_s_at
LDLRAD3
low density lipoprotein
AW043782
0.016656




receptor class A domain






containing 3
















TABLE 14







Type II Epidermis; Down-regulated











GeneTitan_ID
Gene
Title
Public ID
p







homeodomain interacting




11719408_a_at
HIPK2
protein kinase 2
BM679184
0.000155


11739028_s_at
CLTC
clathrin, heavy chain (Hc)
BX395378
0.00019


11747337_x_at
EIF3I
eukaryotic translation
U36764.1
0.000378




initiation factor 3, subunit I






TBC1 domain family,




11749845_a_at
TBC1D22A
member 22A
AK301445.1
0.000577




sec1 family domain




11723960_at
SCFD2
containing 2
BC032453.1
0.000699




proteasome (prosome,






macropain) subunit, beta




11717105_a_at
PSMB5
type, 5
NM_001144932.1
0.00071




proteasome (prosome,






macropain) 26S subunit,




11716545_x_at
PSMC1
ATPase, 1
NM_002802.2
0.00077




1-acylglycerol-3-phosphate






O-acyltransferase 5






(lysophosphatidic acid




11730754_s_at
AGPAT5
acyltransferase, epsilon)
CB306609
0.00077


11750994_a_at
SYAP1
synapse associated protein 1
AK295322.1
0.000788


11754977_x_at
CTSB
cathepsin B
CR614817.1
0.000808




ATPase, H+ transporting,






lysosomal 9kDa, V0 subunit




200096_PM_s_at
ATP6V0E1
e1
AI862255
0.000889




serpin peptidase inhibitor,






clade B (ovalbumin),




11738899_a_at
SERPINB12
member 12
NM_080474.1
0.000913




G-rich RNA sequence




11747533_a_at
GRSF1
binding factor 1
AK298883.1
0.000973




proteasome (prosome,






macropain) 26S subunit,




11733918_a_at
PSMD14
non-ATPase, 14
BC066336.1
0.001091


11753572_a_at
TMEM85
transmembrane protein 85
AY336092.1
0.001121




glucosidase, alpha; neutral




11738988_a_at
GANAB
AB
AK302752.1
0.001195




golgi reassembly stacking




11751303_s_at
GORASP2
protein 2, 55kDa
AK293640.1
0.001298




mitochondrial ribosomal




11719482_a_at
MRPL21
protein L21
NM_181515.1
0.001366




proteasome
(prosome,





macropain) subunit, beta




11715943_x_at
PSMB1
type, 1
NM_002793.3
0.001475


11749935_s_at
TPM3
tropomyosin 3
AK298678.1
0.001523




succinate dehydrogenase






complex, subunit C, integral




11736759_s_at
SDHC
membrane protein, 15kDa
AB211234.1
0.001635




tyrosine 3-






monooxygenase/tryptophan






5-monooxygenase
activation



11731397_a_at
YWHAB
protein, beta polypeptide
AI866370
0.001646




mediator complex subunit




11751557_s_at
MED27
27
AK298436.1
0.001692




transmembrane BAX




11747146_s_at
TMBIM6
inhibitor motif containing 6
AK304577.1
0.001727




N-ethylmaleimide-sensitive




11716972_s_at
NSF
factor
NM_006178.2
0.001747




proteasome (prosome,






macropain) subunit, beta




11754009_a_at
PSMB5
type, 5
BT006777.1
0.001747




mitochondrial ribosomal




11717459_a_at
MRPL39
protein L39
NM_017446.3
0.001824




mitochondrial ribosomal




11742273_a_at
MRPL33
protein L33
AF420602.1
0.001825


11739599_a_at
ZNF398
zinc finger protein 398
BU736496
0.001891


11747534_a_at
RSU1
Ras suppressor protein 1
BC008691.1
0.002033




nucleosome assembly




11747507_x_at
NAP1L4
protein 1-like 4
AK316548.1
0.002069




nucleosome assembly




11747506_a_at
NAP1L4
protein 1-like 4
AK316548.1
0.002092




phosphatidylinositol binding




11748665_a_at
PICALM
clathrin assembly protein
AK300275.1
0.002111




peptidylprolyl isomerase




11718035_at
PPIL1
(cyclophilin)-like 1
AF151882.1
0.002124


11751336_x_at
MKRN1
makorin ring finger protein 1
AK297361.1
0.002138




activating signal






cointegrator 1 complex




11720264_at
ASCC3
subunit 3
NM_006828.2
0.002301


11725037_a_at
5EC23IP
5EC23 interacting protein
AK000698.1
0.002534




mitochondrial ribosomal




11715772_x_at
MRPL13
protein L13
NM_014078.4
0.002536




prolyl 4-hydroxylase, beta




11716173_a_at
P4HB
polypeptide
AK296206.1
0.002544




proteasome (prosome,






macropain) subunit, beta




11717106_x_at
PSMB5
type, 5
NM_001144932.1
0.002579




ras homolog gene family,




200059_PM_s_at
RHOA
member A
BC001360.1
0.002604


11746655_a_at
ACAAI
acetyl-CoA acyltransferase 1
AK303251.1
0.002689




ATP synthase, H+






transporting, mitochondrial






Fo complex, subunit C3




11739201_a_at
ATP5G3
(subunit 9)
6E736890
0.002714




ATP synthase, H+






transporting, mitochondrial






F1 complex, alpha subunit 1,




11728637_a_at
ATP5AI
cardiac muscle
NM_001001937.1
0.002718




BCL2-like 10 (apoptosis




11756013_a_at
BCL2L10
facilitator)
BC143227.1
0.002726




proteasome (prosome,






macropain) subunit, beta




11754271_a_at
PSMB4
type, 4
BM849884
0.002734




proteasome (prosome,






macropain) 26S subunit,




11731415_a_at
PSMD6
non-ATPase, 6
NM_014814.1
0.002807




succinate dehydrogenase






complex, subunit C, integral




11715840_s_at
SDHC
membrane protein, 15kDa
BC020808.1
0.002866




succinate-CoA ligase, ADP-




11755266_x_at
SUCLA2
forming, beta subunit
AK001458.1
0.003146




sec1 family domain




11750876_a_at
SCFD1
containing 1
AK301406.1
0.003266




SWI/SNF related, matrix






associated, actin dependent






regulator of chromatin,




11752770_a_at
SMARCE1
subfamily e, member 1
AK294666.1
0.003311




SERPINE1 mRNA binding




11758800_x_at
SERBP1
protein 1
AF151813.1
0.003464


11751835_a_at
LTV1
LTV1 homolog (S. cerevisiae)
AY326463.1
0.003472


11758319_x_at
UBC
ubiquitin C
BF672950
0.003583


11729168_x_at
DCTD
dCMP deaminase
BC001286.1
0.003633




NADH dehydrogenase






(ubiquinone) 1 beta




11717159_a_at
NDUFB3
subcomplex, 3, 12kDa
NM_002491.2
0.003697




phenylalanyl-tRNA




11744181_a_at
FARS2
synthetase 2, mitochondrial
BG192794
0.003735




ADP-ribosylation factor-like




11751412_x_at
ARL1
1
AK301701.1
0.003805




proteasome (prosome,






macropain) subunit, alpha




11734682_a_at
PSMA7
type, 7
NM_002792.2
0.003878


11750059_a_at
MLX
MAX-like protein X
AK296114.1
0.003884




zinc finger, HIT-type




11715718_a_at
ZNHIT1
containing 1
NM_006349.2
0.003894




REX2, RNA exonuclease 2




11751360_x_at
REX02
homolog (S. cerevisiae)
BC107887.1
0.003907




phosphoserine




11747349_s_at
PSAT1
aminotransferase 1
BT006840.1
0.003982




mitochondrial ribosomal




11763975_a_at
MRPS11
protein S11
DB346141
0.004073


11716381_x_at
BRP44
brain protein 44
NM_015415.2
0.00408




transmembrane emp24






protein transport domain




11751523_a_at
TMED5
containing 5
AK293308.1
0.004086




small nuclear






ribonucleoprotein




11753974_s_at
SNRPG
polypeptide G
CR456918.1
0.004159




penta-EF-hand domain




11732216_s_at
PEF1
containing 1
CR542139.1
0.004221




calpain 2, (m/II) large




11718978_x_at
CAPN2
subunit
BC021303.2
0.004238




ATPase, H+ transporting,






lysosomal 38kDa, V0 subunit




11763422_a_at
ATP6V0D1
dl
BX397389
0.004241


11754060_a_at
DAD1
defender against cell death
CR542204.1
0.004283




signal peptidase complex






subunit 1 homolog (S.




11743905_a_at
SPCS1
cerevisiae)
6E782150
0.004361




proteasome (prosome,






macropain) subunit, beta




11715732_at
PSMB3
type, 3
NM_002795.2
0.004369




Yip1 domain family, member




11751505_a_at
YIPF1
1
AK300240.1
0.004409




chromosome 11 open




11742925_a_at
C11orf59
reading frame 59
CR457247.1
0.004503




S-phase kinase-associated




11715417_s_at
SKP1
protein 1
BC020798.1
0.004548




phosphoglycerate mutase 1




11750438_x_at
PGAM1
(brain)
AK296619.1
0.004563


11752939_x_at
PGK1
phosphoglycerate kinase 1
AK298855.1
0.004575




cell division cycle 123




11723478_s_at
CDC123
homolog (S. cerevisiae)
NM_006023.2
0.004585




retinol dehydrogenase 11




11743034_x_at
RDH11
(all-trans/9-cis/11-cis)
AK289427.1
0.004593




VAMP (vesicle-associated






membrane protein)-




11754086_x_at
VAPA
associated protein A, 33kDa
BT019618.1
0.004657




heterogeneous nuclear






ribonucleoprotein D (AU-






rich element RNA binding




11749303_s_at
HNRNPD
protein 1, 37kDa)
AK300149.1
0.004671




proteasome (prosome,






macropain) 26S subunit,




11753142_a_at
PSMD11
non-ATPase, 11
AK300342.1
0.004673


11747719_a_at
KIAA0391
KIAA0391
AK304066.1
0.004719




CWF19-like 1, cell cycle




11748974_s_at
CWF19L1
control (S. pombe)
AK295303.1
0.004746




ATPase, H+ transporting,






lysosomal 56/58kDa, V1




11751133_a_at
ATP6V1B2
subunit B2
AK298819.1
0.004759




inner membrane protein,




11715552_a_at
IMMT
mitochondrial
NM_006839.2
0.004766


11747365_a_at
QARS
glutaminyl-tRNA synthetase
AK302867.1
0.004855




succinate dehydrogenase






complex, subunit D, integral




11758248_s_at
SDHD
membrane protein
BF696015
0.004909




eukaryotic translation




11753592_x_at
EEF1G
elongation factor 1 gamma
AK299876.1
0.004961




NADH dehydrogenase






(ubiquinone) 1 alpha




11715369_s_at
NDUFA4
subcomplex, 4, 9kDa
BC105295.1
0.005125


11715499_x_at
CBX3
chromobox homolog 3
U26312.1
0.005141




ATP synthase, H+




11715874_s_at
ATP5H
transporting, mitochondrial
NM_006356.2
0.005143




Fo complex, subunit d






succinate dehydrogenase






complex, subunit D, integral




11758311_s_at
SDHD
membrane protein
BF697775
0.005199


11715883_x_at
DAP3
death associated protein 3
NM_004632.2
0.005251




poly(A) binding protein,






cytoplasmic 4 (inducible




11754030_a_at
PABPC4
form)
BC118568.1
0.00537




exocyst complex component




11749682_s_at
EXOC5
5
AK303531.1
0.005371




tetratricopeptide repeat




11718142_a_at
TTC27
domain 27
NM_017735.3
0.005424




thioredoxin domain




11754067_a_at
TXNDC9
containing 9
CR456935.1
0.005482




aldo-keto reductase family






1, member A1 (aldehyde




11716509_a_at
AKR1A1
reductase)
NM_006066.2
0.005483
















TABLE 15







Type II Dermis; Up-regulated











GeneTitan_ID
Gene
Title
Public ID
p





11715351_at
COL1AI
collagen, type I, alpha 1
NM_000088.3
0.000139


11715352_x_at
COL1AI
collagen, type I, alpha 1
NM_000088.3
0.000375


11734105 a_at
PNMAL2
PNMA-like 2
AB033009.1
0.001583


11763844_s_at
UBXN6
UBX domain protein 6
CR590857.1
0.001819


11756896_a_at
COL6A6
collagen, type VI, alpha 6
AL713792.1
0.002188




chromosome 15 open reading




11715284_x_at
C15orf40
frame 40
g237858663
0.003648




platelet-derived growth






factor receptor, beta




11715852_at
PDGFRB
polypeptide
NM_002609.3
0.005919




phosphatidylinositol-5-






phosphate 4-kinase, type II,




11715888_s_at
PIP4K2B
beta
NM_003559.4
0.006199




chromosome 5 open reading




11724481_a_at
C5orf13
frame 13
NM_004772.2
0.006404


11758388_s_at
LHX8
LIM homeobox 8
DB302169
0.006562




G protein-coupled receptor




11727836_a_at
GPR78
78
NM_001014447.1
0.007388




family with sequence




11729827_at
FAM110B
similarity 110, member B
BCO24294.1
0.009523




family with sequence




11744562_x_at
FAM176B
similarity 176, member B
BC071697.1
0.009813


11725867_s_at
EBF3
early B-cell factor 3
NM_001005463.1
0.009883




progestin and adipoQ




11749069_a_at
PAQR4
receptor family member IV
AK295348.1
0.010054




corticotropin releasing




11723068_at
CRHBP
hormone binding protein
NM_001882.3
0.011101




fibronectin type III domain




11723174_a_at
FNDC1
containing 1
NM_032532.2
0.011173


11717274_s_at
COL5AI
collagen, type V, alpha 1
BQ007762
0.012177




calcium/calmodulin-






dependent protein kinase




11729541_a_at
CAMKK2
kinase 2, beta
AB081337.1
0.012395


11724848_a_at
DIXDC1
DIX domain containing 1
DB358954
0.013451


11726830_at
ANTXR1
anthrax toxin receptor 1
NM_018153.3
0.013945




transforming growth factor,




11727296_s_at
TGFB3
beta 3
NM_003239.2
0.014199




exonuclease 3′-5′ domain




11759905_a_at
EXD3
containing 3
BC110879.1
0.01495




transcription factor 7-like 1




11721372_at
TCF7L1
(T-cell specific, HMG-box)
NM_031283.1
0.01515




fibroblast activation protein,




11755955_a_at
alpha
AL832166.1






FAP
0.015704





matrix metallopeptidase 14




11725989_x_at
MMP14
(membrane-inserted)
NM_004995.2
0.019095


11717272_at
COL5AI
collagen, type V, alpha 1
AB371583.1
0.020092




chromosome 19 open reading




11739544_a_at
C19orf12
frame 12
BX328123
0.021




C-type lectin domain family 3,




11727867_a_at
CLEC3B
member B
NM_003278.2
0.024069




calcium/calmodulin-






dependent protein kinase




11731645_a_at
CAMKK2
kinase 2, beta
BCO26060.2
0.024228




aldo-keto reductase family 1,






member C2 (dihydrodiol






dehydrogenase 2; bile acid






binding protein; 3-alpha






hydroxysteroid




11729101_a_at
AKR1C2
dehydrogenase, type III)
NM_205845.1
0.024814




hairy and enhancer of split 4




11726474_a_at
HES4
(Drosophila)
NM_021170.3
0.025047


11725224_a_at
ZNF193
zinc finger protein 193
NM_006299.3
0.026826


11715350_a_at
COL1AI
collagen, type I, alpha 1
BC036531.2
0.026857




matrix metallopeptidase 2






(gelatinase A, 72kDa






gelatinase, 72kDa type IV




11741377_a_at
MMP2
collagenase)
NM_001127891.1
0.02687




NYN domain and retroviral




11722292_a_at
NYNRIN
integrase containing
NM_025081.2
0.027121


11730404_at
MEX3B
mex-3 homolog B (C. elegans)
NM_032246.3
0.027161




thyroid hormone receptor,






alpha (erythroblastic






leukemia viral (v-erb-a)




11759126_a_at
THRA
oncogene homolog, avian)
CB054873
0.02738


11744348_x_at
COL6A2
collagen, type VI, alpha 2
BC002484.2
0.027551


11720845_a_at
CD248
CD248 molecule, endosialin
NM_020404.2
0.02836


11720372_at
TESC
tescalcin
NM_017899.2
0.028677




syntrophin, alpha 1






(dystroph in-associated






protein Al, 59kDa, acidic




11752890_a_at
SNTAI
component)
AK301800.1
0.029777


11717273_at
COL5AI
collagen, type V, alpha 1
BQ007762
0.030174




aldehyde dehydrogenase
1



11754184_a_at
ALDH1A3
family, member A3
BX538027.1
0.030605




TRIO and F-actin binding




11727155_a_at
TRIOBP
protein
NM_007032.5
0.030721


11727031_a_at
SQSTM1
sequestosome 1
NM_003900.4
0.031363


11720846_at
CD248
CD248 molecule, endosialin
NM_020404.2
0.031411




triple functional domain




11761938_a_at
TRIO
(PTPRF interacting)
AB115332.1
0.032433


11718096_a_at
MEF2A
myocyte enhancer factor 2A
BC013437.2
0.03254




neuro-oncological ventral




11734906_a_at
NOVAI
antigen 1
NM_002515.2
0.032886




R-spondin 3 homolog




11724619_at
RSPO3
(Xenopus laevis)
NM_032784.3
0.033442




shisa homolog 3 (Xenopus




11726188_at
SHISA3
laevis)
NM_001080505.1
0.033466




glutathione peroxidase 8




11729644_a_at
GPX8
(putative)
AK074216.1
0.033979




adrenergic, alpha-2C-,




11756359_s_at
ADRA2C
receptor
CR590957.1
0.034296


11747064_x_at
ANXAll
annexin All
AK301047.1
0.034459




chromosome 16 open reading




11732785_a_at
Cl6orf45
frame 45
NM_001142469.1
0.035589




microtubule-associated




11727030_s_at
MAP1A
protein 1A
NM_002373.5
0.036125




sema domain,






immunoglobulin domain (Ig),






short basic domain, secreted,




11748738_a_at
SEMA3E
(semaphorin) 3E
AK303925.1
0.036605




leucine rich repeat containing




11721995_a_at
LRRC32
32
NM_001128922.1
0.038953




host cell factor Cl regulator 1




11726189_x_at
HCFC1R1
(XPO1 dependent)
NM_017885.2
0.039807




RGM domain family, member




11754792_a_at
RGMA
A
AK125204.1
0.040435




protein phosphatase 1,






regulatory (inhibitor) subunit




11717123_a_at
PPP1R12B
12B
NM_032105.1
0.043242




triple functional domain




11724260_a_at
TRIO
(PTPRF interacting)
AF091395.1
0.044219


11759962_at
TPRKB
TP53RK binding protein
AY643713.1
0.045288


11733167_at
LRRN4CL
LRRN4 C-terminal like
BC053902.1
0.045766




trinucleotide repeat




11721703_s_at
TN RC18
containing 18
NM_001080495.2
0.045935




ATPase, aminophospholipid






transporter (APLT), class I,




11725568_a_at
ATP8AI
type 8A, member 1
NM_001105529.1
0.046173




membrane metallo-




11741562_a_at
MME
endopeptidase
NM_007287.2
0.046616




pleiomorphic adenoma gene-




11745820_s_at
PLAGL1
like 1
BQ026948
0.046856




C-type lectin domain family




11743696_at
CLEC14A
14, member A
CA412481
0.047788


11720277_a_at
OLFML2A
olfactomedin-like 2A
NM_182487.2
0.049248
















TABLE 16







Type II Dermis; Down-regulated











GeneTitan_ID
Gene
Title
Public ID
p







microtubule-associated




11749128_x_at
MAP7
protein 7
AK299355.1
0.000033




eukaryotic translation




11720184_x_at
EEF162
elongation factor 1 beta 2
NM_001959.3
0.000101




sulfotransferase family 1E,






estrogen-preferring, member




11724155_at
SULT1E1
1
U08098.1
0.000109


200062_PM_s_at
RPL30
ribosomal protein L30
L05095.1
0.000123


11742734_s_at
WDR3
WD repeat domain 3
AK292438.1
0.000139




nucleosome assembly protein




11732205_x_at
NAP1L1
1-like 1
BX413854
0.000141


11743604_s_at
RRM1
ribonucleotide reductase M1
6E618815
0.000164




heterogeneous nuclear




11723197_at
HNRNPA3
ribonucleoprotein A3
BX434302
0.000178




ATP-binding cassette, sub-




11732684_a_at
ABCAI2
family A (ABC1), member 12
AF418105.1
0.000237




discs, large homolog 1




11739308_s_at
DLG1
(Drosophila)
BM681931
0.000254


11725875_at
WDR66
WD repeat domain 66
NM_144668.4
0.000271


200082_PM_s_at
RPS7
ribosomal protein S7
AI805587
0.00036


200081_PM_s_at
RPS6
ribosomal protein S6
6E741754
0.000371




nucleophosmin (nucleolar






phosphoprotein 623,




200063_PM_s_at
NPM1
numatrin)
BC002398.1
0.000404


11757356_x_at
RPL30
ribosomal protein L30
BM855760
0.000405


11719783_at
RPS23
ribosomal protein S23
D14530.1
0.000416




sulfotransferase family 1E,






estrogen-preferring, member




11724156_at
SULT1E1
1
NM_005420.2
0.000461




eukaryotic translation




11720183_s_at
EEF162
elongation factor 1 beta 2
NM_001959.3
0.000477


11745154_a_at
NCL
nucleolin
BC006516.2
0.000485


11715958_s_at
RPL7
ribosomal protein L7
NM_000971.3
0.000491


11749558_a_at
CYP4F8
cytochrome P450, family 4,
AK300530.1
0.000497




subfamily F, polypeptide 8




11755203_x_at
RPL21
ribosomal protein L21
BX647669.1
0.000511


11728022_a_at
TMEM45A
transmembrane protein 45A
NM_018004.1
0.000533




eukaryotic translation




11718273_a_at
EIF3L
initiation factor 3, subunit L
NM_016091.2
0.000658




protein kinase, DNA-activated,




11757399_s_at
PRKDC
catalytic polypeptide
AV760328
0.000698




chromosome 10 open reading




11736055_at
C10orf32
frame 32
BG696280
0.000732




steroid-5-alpha-reductase,






alpha polypeptide 1 (3-oxo-5






alpha-steroid delta 4-




11749267_a_at
SRD5A1
dehydrogenase alpha 1)
AK315996.1
0.000744




transmembrane 9 superfamily




11716946_s_at
TM9SF3
member 3
AF269150.1
0.000758


11726461_a_at
PDCD2
programmed cell death 2
NM_144781.1
0.000759


11763318_s_at
CSNK1A1
casein kinase 1, alpha 1
BC040473.1
0.000792




eukaryotic translation




11727794_s_at
EIF3E
initiation factor 3, subunit E
NM_001568.2
0.000802




phosphoinositide-3-kinase,




11731690_a_at
PIK3C2G
class 2, gamma polypeptide
NM 004570.4
0.000846


11748052_x_at
E124
etoposide induced 2.4 mRNA
AK316539.1
0.000851


11743094_at
SPRR4
small proline-rich protein 4
BC069445.1
0.000998


11717236_x_at
RPS7
ribosomal protein S7
NM_001011.3
0.001062


11718719_at
K1AAI797
K1AAI797
NM_017794.3
0.001102




transcription elongation factor




11752908_a_at
TCEA1
A (SII), 1
AK297729.1
0.001141


11753659_x_at
RPL30
ribosomal protein L30
BC095426.1
0.001161


11717058_x_at
RPL5
ribosomal protein L5
NM_000969.3
0.001214




chromosome 10 open reading




11736057_s_at
C10orf32
frame 32
BU685637
0.00123




phosphoserine




11742991_a_at
PSAT1
aminotransferase 1
AK295222.1
0.001244


11758357_x_at
RPL9
ribosomal protein L9
BF172613
0.00126


200010_PM_at
RPL11
ribosomal protein L11
NM_000975.1
0.001282




transcription factor AP-2






gamma (activating enhancer




11749776_a_at
TFAP2C
binding protein 2 gamma)
AK301572.1
0.001283




serine peptidase inhibitor,




11727995_a_at
SPINK5
Kazal type 5
DQ149928.1
0.001284




chromosome 14 open reading




11722185_at
C14orf147
frame 147
NM_138288.3
0.001309




eukaryotic translation




11750883_a_at
EIF2A
initiation factor 2A, 65kDa
AF109358.1
0.001327


200017_PM_at
RPS27A
ribosomal protein S27a
NM_002954.1
0.001414




cytochrome P450, family 4,




11749559_x_at
CYP4F8
subfamily F, polypeptide 8
AK300530.1
0.001416


11722308_a_at
TP63
tumor protein p63
NM_003722.4
0.001433




nucleophosmin (nucleolar






phosphoprotein 623,




11754066_x_at
NPM1
numatrin)
BT007011.1
0.001448


11743603_a_at
RRM1
ribonucleotide reductase M1
6E618815
0.001462




serine peptidase inhibitor,




11754963_a_at
SPINK5
Kazal type 5
AK301660.1
0.001558




hydroxysteroid (17-beta)




11747333_a_at
HSD1764
dehydrogenase 4
AK295440.1
0.001571




nucleophosmin (nucleolar






phosphoprotein 623,




11757386_x_at
NPM1
numatrin)
AL563600
0.00169




cytochrome P450, family 4,




11751437_a_at
CYP4F8
subfamily F, polypeptide 8
AK300539.1
0.001708


11726258_at
RNF141
ring finger protein 141
BX503543
0.001716


11720766_a_at
METTL9
methyltransferase like 9
AK074529.1
0.001743




coiled-coil domain containing




11743729_at
CCDC47
47
AL575693
0.001771




heterogeneous nuclear




11749786_x_at
HNRNPF
ribonucleoprotein F
AK296696.1
0.001879




eukaryotic translation




11729152_a_at
EIF3M
initiation factor 3, subunit M
NM_006360.3
0.001895




UDP glucuronosyltransferase 2




11737634_a_at
UGT2A1
family, polypeptide Al
NM_006798.2
0.001986


11748044_a_at
SCEL
sciellin
BCO20726.1
0.002038




eukaryotic translation




11752912_x_at
EIF3M
initiation factor 3, subunit M
AK292139.1
0.002066


11736309_a_at
CSNK1A1
casein kinase 1, alpha 1
L37042.1
0.002093


11727421_a_at
CANX
calnexin
C6243867
0.002106


11727425_s_at
CANX
cal nexin
M94859.1
0.002182




ribosomal protein SA




11757305_x_at
RPSAP58
pseudogene 58
61762726
0.002211




transmembrane emp24




200087_PM_s_at
TMED2
domain trafficking protein 2
AK024976.1
0.002219




RAB11A, member RAS




11718030_at
RAB11A
oncogene family
NM_004663.3
0.002258


11742887_a_at
BAGS
BCL2-associated athanogene 5
6Q008934
0.00227


11746199_a_at
METTL9
methyltransferase like 9
AA524199
0.002298




phosphoserine




11756182_s_at
PSAT1
aminotransferase 1
AAI73918
0.002312


11727658_s_at
KLK10
kallikrein-related peptidase 10
AF024605.1
0.002335




nucleosome assembly protein




11732204_a_at
NAP1L1
1-like 1
BX413854
0.002341


11744334_x_at
RPS17
ribosomal protein S17
BC071928.1
0.002403




DIM1 dimethyladenosine






transferase 1-like (S.




11748536_a_at
DIMT1L
cerevisiae)
BC002841.2
0.002406


11745155_s_at
NCL
nucleolin
BC006516.2
0.002458




nucleophosmin (nucleolar






phosphoprotein B23,




11730790_x_at
NPM1
numatrin)
AK290652.1
0.002509




cytochrome P450, family 4,




11740643_a_at
CYP4F8
subfamily F, polypeptide 8
AF133298.1
0.002616




ATPase, Ca++ transporting,




11755057_s_at
ATP2C1
type 2C, member 1
AB037768.1
0.002687




phosphoserine




11742992_s_at
PSAT1
aminotransferase 1
AK295222.1
0.002716


11757424_x_at
RPL37
ribosomal protein L37
F34903
0.002789




peroxisomal membrane




11723312_a_at
PXMP2
protein 2, 22kDa
NM_018663.1
0.002819


11756137_x_at
BTF3
basic transcription factor 3
CA772090
0.002824


11754054_x_at
RPL3
ribosomal protein L3
L22453.1
0.002905


11750667_a_at
RRM1
ribonucleotide reductase M1
AK297988.1
0.00292




RAB11A, member RAS




11751326_a_at
RAB11A
oncogene family
AK300008.1
0.002998


11749040_a_at
PGM2
phosphoglucomutase 2
AK297752.1
0.003008


11715376_a_at
RPS11
ribosomal protein S11
NM_001015.3
0.003035




DEAD (Asp-Glu-Ala-Asp) box




11715849_a_at
DDX47
polypeptide 47
NM_016355.3
0.003047




tRNA-yW synthesizing protein




11726829_at
TYW1B
1 homolog B (S. cerevisiae)
NM_001145440.1
0.003195




chromosome 14 open reading




11756267_x_at
C14orf166
frame 166
BX349547
0.003217


11756437_x_at
RPS18
ribosomal protein S18
BQ057441
0.003368


11715648_x_at
ADIPOR1
adiponectin receptor 1
AY424279.1
0.003389




prostaglandin E synthase 3




11747662_x_at
PTGES3
(cytosolic)
AK298147.1
0.003391




solute carrier family 39 (zinc




11749546_a_at
5LC39A6
transporter), member 6
AK301539.1
0.003463




protein disulfide isomerase




11745720_s_at
PDIA6
family A, member 6
D49489.1
0.00351


200074_PM_s_at
RPL14
ribosomal protein L14
U16738.1
0.003587




phosphogluconate




11746023_a_at
PGD
dehydrogenase
AK304423.1
0.003624
















TABLE 17







Type III Epidermis; Up-regulated











GeneTitan_ID
Gene
Title
Public ID
p





11725675_a_at
RORA
RAR-related orphan receptor A
AA034012
0.00064


11732366_a_at
SCAPER
S-phase cyclin A-associated
BC015212.1
0.001096




protein in the ER




11739639_at
CDK12
cyclin-dependent kinase 12
AW968504
0.001477


11745215_a_at
KBTBD4
kelch repeat and BTB (POZ)
CR457270.1
0.001496




domain containing 4




11730873_a_at
RASSF5
Ras association (RalGDS/AF-6)
NM_182665.2
0.001694




domain family member 5




11718966_at
NUFIP2
nuclear fragile X mental
BU533767
0.001959




retardation protein interacting






protein 2




11718513_x_at
TSPAN14
tetraspanin 14
NM_030927.2
0.002425


11744585_a_at
ATRN
attractin
AK302730.1
0.003547


11755420_a_at
KDM4B
lysine (K)-specific demethylase 4B
AK126854.1
0.003701


11720895_at
SOS1
son of sevenless homolog 1
BM970418
0.003776




(Drosophila)




11734873_a_at
SCAPER
S-phase cyclin A-associated
NM_020843.2
0.00429




protein in the ER




11759897_x_at
OFD1
oral-facial-digital syndrome 1
BC042830.1
0.004666


11754251_a_at
USP36
ubiquitin specific peptidase 36
AK022913.1
0.005023


11736059_a_at
KIF5B
kinesin family member 5B
BC065267.1
0.005318


11754824_a_at
HSPC159
galectin-related protein
DB323149
0.005358


11757991_s_at
ANKRD12
ankyrin repeat domain 12
AA399583
0.006238


11744468_at
SYNCRIP
synaptotagmin binding,
AK056188.1
0.007087




cytoplasmic RNA interacting






protein




11754992_a_at
CHD1
chromodomain helicase DNA
BE535223
0.007613




binding protein 1




11716283_at
PAPD7
PAP associated domain
NM_006999.3
0.00802




containing 7




11722973_s_at
FOXK1
forkhead box K1
NM_001037165.1
0.008695


11748149_a_at
FNBP1
formin binding protein 1
AK293743.1
0.009063


11722125_a_at
C3orf19
chromosome 3 open reading
AL526467
0.009976




frame 19




11720007_a_at
STEAP4
STEAP family member 4
NM_024636.2
0.011197


11731506_a_at
RAD23B
RAD23 homolog B (S. cerevisiae)
NM_002874.3
0.011526


11724759_s_at
CALM1
calmodulin 1 (phosphorylase
NM_006888.3
0.011622




kinase, delta)




11718161_at
KLF13
Kruppel-like factor 13
AF132599.1
0.012064


11726305_at
C10orf84
chromosome 10 open reading
BC023577.2
0.012188




frame 84




11723962_at
KIAAI143
KIAAI143
BC008468.1
0.012597


11740956_x_at
PLEKHN1
pleckstrin homology domain
NM_032129.1
0.013256




containing, family N member 1




11722305_at
ARHGAP23
Rho GTPase activating protein 23
NM_020876.1
0.01353




family with sequence similarity




11726022_a_at
FAM177AI
177, member AI
BC029559.1
0.01364


11754010_x_at
GOLGA2
golgin A2
BT007248.1
0.013918


11729523_a_at
NLRC5
NLR family, CARD domain
NM_032206.3
0.014235




containing 5




11723113_a_at
CENPC1
centromere protein C 1
BC041117.1
0.0145




UPF1 regulator of nonsense




11754616_a_at
UPF1
transcripts homolog (yeast)
AI690963
0.014647


11722291_s_at
ZBTB43
zinc finger and BTB domain
AI745225
0.014686




containing 43




11739805_a_at
RASAL2
RAS protein activator like 2
AK075169.1
0.014761


11723502_at
PRLR
prolactin receptor
AI435838
0.014945


11726244_a_at
RORA
RAR-related orphan receptor A
U04898.1
0.01551


11736104_a_at
ZNF750
zinc finger protein 750
BC109037.1
0.015749


11723184_x_at
CNOT6L
CCR4-NOTt ranscription complex,
BQ025327
0.015988




subunit 6-like




11755058_a_at
BAZ1A
bromodomain adjacent to zinc
BC020636.1
0.016704




finger domain, 1A




11759600_at
SFRS18
Splicing factor, arginine/serine-
AK027751.1
0.016758




rich 18




11744829_s_at
HLA-E
major histocompatibility
AK296822.1
0.016828




complex, class I, E






guanylate binding protein 2,




11719447_s_at
GBP2
interferon-inducible
BC073163.1
0.016832


11720541_at
HSPC159
galectin-related protein
NM_014181.2
0.017088




pleckstrin and Sec7 domain




11719028_a_at
PSD3
containing 3
DB314358
0.017377


11754462_a_at
RSPRY1
ring finger and SPRY domain
AU253443
0.017904




containing 1




11725676_a_at
RORA
RAR-related orphan receptor A
NM_002943.3
0.018226


11722290_a_at
ZBTB43
zinc finger and BTB domain
AI745225
0.018329




containing 43




11723821_a_at
SMURF2
SMAD specific E3 ubiquitin
AY014180.1
0.018461




protein ligase 2




11720111_at
SNTB2
syntrophin, beta 2 (dystrophin-
BC036429.1
0.018669




associated protein AI, 59kDa,






basic component 2)




11736432_x_at
PPP4R2
protein phosphatase 4,
BC128136.1
0.01869




regulatory subunit 2




11744000_a_at
NFKBIA
nuclear factor of kappa light
BX367826
0.018695




polypeptide gene enhancer in B-






cells inhibitor, alpha




11759512_x_at
CWC25
CWC25 spliceosome-associated
CR748127
0.018768




protein homolog (S. cerevisiae)




11716095_s_at
KLF6
Kruppel-like factor 6
CD366698
0.019227


11754447_a_at
RPS6KA5
ribosomal protein S6 kinase,
BM968829
0.019584




90kDa, polypeptide 5




11719085_a_at
SMARCC2
SWI/SNF related, matrix
AL544435
0.01997




associated, actin dependent






regulator of chromatin, subfamily






c, member 2




11727506_x_at
RAB21
RAB21, member RAS oncogene
BC021901.1
0.020551




family




11720276_s_at
TREX1
three prime repair exonuclease 1
NM_016381.3
0.020671


11724549_a_at
RSBN1
round spermatid basic protein 1
AK292552.1
0.020675


11731645_a_at
CAMKK2
calcium/calmodulin-dependent
BC026060.2
0.020762




protein kinase kinase 2, beta




11737413_at
MICALCL
MICAL C-terminal like
NM_032867.2_
0.020903


11715938_x_at
KHDRBS1
KH domain containing, RNA
BC000717.1
0.021833




binding, signal transduction






associated 1




11747192_x_at
NFIC
nuclear factor I/C (CCAAT-binding
AK289885.1
0.022039




transcription factor)




11729396_a_at
NEK1
NIMA (never in mitosis gene a)-
Z25431.1
0.022138




related kinase 1




11727064_a_at
ANKRD11
ankyrin repeat domain 11
BU674634
0.022386


11752626_a_at
PBX1
pre-B-cell leukemia homeobox 1
AK299673.1
0.022397


11721119_a_at
ANKHD1-
ANKHD1-EIF4EBP3 readthrough
AF217646.1
0.022562



EIF4EBP3





11743648_a_at
DCAF6
DDB1 and CUL4 associated factor
BF672818
0.022893




6




11740362_a_at
FOXN3
forkhead box N3
U68723.1
0.023025


11718869_x_at
PALMD
palmdelphin
CF552454
0.023068


11727604_a_at
EPB41L4A
erythrocyte membrane protein
NM_022140.3
0.023101




band 4.1 like 4A




11726633_s_at
TRIM8
tripartite motif-containing 8
BCO21925.1
0.023187


11732370_a_at
CUX1
cut-like homeobox 1
NM_181552.2
0.023258


11726113_a_at
FAM46B
family with sequence similarity
NM_052943.3
0.023515




46, member B




11729100_a_at
TTC18
tetratricopeptide repeat domain
NM_145170.3
0.023862




18




11729259_a_at
ZNF644
zinc finger protein 644
BQ014639
0.023971


11745806_a_at
AMMECR1L
AMME chromosomal region gene
AK095871.1
0.024186




1-like




11717894_s_at
PTP4AI
protein tyrosine phosphatase
BC023975.2
0.024306




type IVA, member 1




11728765_a_at
PVRL4
poliovirus receptor-related 4
BC010423.1
0.024371


11740747_a_at
DNMT3A
DNA (cytosine-5-)-
AF480163.1
0.024617




methyltransferase 3 alpha




11718868_a_at
PALMD
palmdelphin
CF552454
0.025394


11758133_s_at
COL4A3BP
collagen, type IV, alpha 3
BE046819
0.026883




(Goodpasture antigen) binding






protein




11749969_a_at
TSPAN5
tetraspanin 5
AK295385.1
0.027108


11733899_a_at
TROVE2
TROVE domain family, member 2
BX445026
0.027171


11747743_x_at
MTF2
metal response element binding
AK302776.1
0.027946




transcription factor 2




11746790_a_at
BECN1
beclin 1, autophagy related
AK298619.1
0.027999


11731573_a_at
FRMD4B
FERM domain containing 4B
AU147415
0.028099


11724271_a_at
HLF
hepatic leukemia factor
EL952952
0.028251




KRR1, small subunit (SSU)






processome component,




11728683_x_at
KRR1
homolog (yeast)
U55766.1
0.02827


11758327_s_at
BAZ1A
bromodomain adjacent to zinc
BF852255
0.02853




finger domain, 1A




11743300_a_at
SRP72
signal recognition particle 72kDa
AK225430.1
0.028582


11719103_at
CPNE3
copine III
CB250550
0.028667


11755895_a_at
FAM129A
family with sequence similarity
AK095547.1
0.029014




129, member A




11721326_at
C3orf14
chromosome 3 open reading
AF236158.1
0.029423




frame 14




11738035_s_at
RTN4
reticulon 4
AK302741.1
0.029458


11746122_s_at
ZC3H11A
zinc finger CCCH-type containing
DA094705
0.029486




11A




11724085_at
DAPL1
death associated protein-like 1
NM_001017920.2
0.030615


11735181_a_at
DLX2
distal-less homeobox 2
NM_004405.3
0.030619
















TABLE 18







Type III Epidermis; Down-regulated











GeneTitan_ID
Gene
Title
Public ID
p





11743060_s_at
COMMD10
COMM domain containing 10
AL572695
0.000211


11720515_s_at
C9orf150
chromosome 9 open reading
NM_203403.1
0.000414




frame 150




11716897_x_at
PPIE
peptidylprolyl isomerase E
NM_006112.2
0.000535




(cyclophilin E)




11725787_a_at
C4orf43
chromosome 4 open reading
NM_018352.2
0.000571




frame 43




11729680_a_at
KHK
ketohexokinase (fructokinase)
CR456801.1
0.000981


11745494_x_at
ERCC8
excision repair cross-
U28413.1
0.001042




complementing rodent repair






deficiency, complementation






group 8




11745948_a_at
CHEK1
CHK1 checkpoint homolog (S.
AK299783.1
0.0011





pombe)





11758965_at
ATG4C
ATG4 autophagy related 4
AK027773.1
0.001439




homolog C (S.cerevisiae)




11724079_s_at
E2F2
E2F transcription factor 2
NM_004091.2
0.001667


11718280_s_at
TRIAP1
TP53 regulated inhibitor of
NM_016399.2
0.001683




apoptosis 1




11720459_s_at
CAPRIN1
cell cycle associated protein 1
BQ002768
0.001735


11720615_a_at
TUBG2
tubulin, gamma 2
NM_016437.2
0.00174


11757673_x_at
RPL39
ribosomal protein L39
BX435916
0.001879


11720398_a_at
NBN
nibrin
BC146797.1
0.002186


11734661_a_at
CLSTN3
calsyntenin 3
NM_014718.3
0.0022


11726529_s_at
BRCC3
BRCA1/BRCA2-containing
NM_024332.2
0.002236




complex, subunit 3




11758291_s_at
MRPS10
mitochondrial ribosomal
BF701142
0.002439




protein S10




11726660_a_at
GPN3
GPN-loop GTPase 3
AY359078.1
0.002577


11734619_x_at
ALOX15B
arachidonate 15-
NM_001141.2
0.002749




lipoxygenase, type B




11719482_a_at
MRPL21
mitochondrial ribosomal
NM_181515.1
0.002874




protein L21




11716896_a_at
PPIE
peptidylprolyl isomerase E
NM_006112.2
0.002936




(cyclophilin E)




11757498_s_at
TMEM106C
transmembrane protein 106C
A1278554
0.003263


11722842_s_at
ENAH
enabled homolog (Drosophila)
BC095481.1
0.003561


11722415_a_at
HBS1L
HBS1-like (S.cerevisiae)
BC040849.1
0.003563


11742050_a_at
API5
apoptosis inhibitor 5
AK294724.1
0.003612


11719499_at
MAOB
monoamine oxidase B
NM_000898.4
0.003642


11717099_at
HIST1H2BK
histone cluster 1, H2bk
NM_080593.1
0.003648


11744666_at
FAN1
FANCD2/FANCI-associated
BC047882.1
0.003687




nuclease 1




11756910_x_at
FANCD2
Fanconi anemia,
AL832427.1
0.00395




complementation group D2




11758535_s_at
GPAM
glycerol-3-phosphate
AI074401
0.003969




acyltransferase, mitochondrial




11719920_at
FXC1
fracture callus 1 homolog (rat)
BC011014.1
0.004197




ring finger and CHY zinc finger




11719571_a_at
RCHY1
domain containing 1
BC047393.1
0.004345


11763339_a_at
SIVA1
SIVA1, apoptosis-inducing
AK128704.1
0.004492




factor




11740706_a_at
NFRKB
nuclear factor related to
NM_006165.3
0.004845




kappaB binding protein




11730410_a_at
PXMP4
peroxisomal membrane
NM_007238.4
0.005105




protein 4, 24 kDa




11739973_s_at
NUAK1
NUAK family, SNF1-like
BU686994
0.005564




kinase, 1




11757687_x_at
DAD1
defender against cell death 1
BU535881
0.005572


11721430_a_at
SYBU
syntabulin (syntaxin-
NM_001099744.1
0.005683




interacting)




11722555_sat
HADH
hydroxyacyl-CoA
CR591982.1
0.005987




dehydrogenase




11736367_a_at
MCM10
minichromosome
NM_182751.1
0.006448




maintenance complex






component 10




11739660_x_at
PPCS
phosphopantothenoylcysteine
NM_001077447.1
0.0065




synthetase




11757604_a_at
SAMM50
sorting and assembly
BQ186212
0.006505




machinery component 50






homolog (S.cerevisiae)




11722398_s_at
RWDD4
RWD domain containing 4
NM_152682.2
0.00654


11733866_a_at
RARS2
arginyl-tRNA synthetase 2,
NM_020320.3
0.006608




mitochondrial




11722351_at
SRSF8
serine/arginine-rich splicing
NM_032102.2
0.006693




factor 8




11726320_at
ERO1L
ERO1-like (S.cerevisiae)
NM_014584.1
0.006774




up-regulated during skeletal






muscle growth 5 homolog




11744384_x_at
USMG5
(mouse)
BC072683.1
0.006853


11733975_a_at
DDHD2
DDHD domain containing 2
BU631346
0.007241


11727533_a_at
FEZ2
fasciculation and elongation
NM_001042548.1
0.007345




protein zeta 2 (zygin II)




11723462_a_at
PHKB
phosphorylase kinase, beta
NM_001031835.2
0.007666


11718475_s_at
IDH1
isocitrate dehydrogenase 1
NM_005896.2
0.007717




(NADP+), soluble




11744822_a_at
NDUFB2
NADH dehydrogenase
BC063026.1
0.007876




(ubiquinone) 1 beta






subcomplex, 2, 8 kDa




11757589_a_at
NDUFA12
NADH dehydrogenase
BU537124
0.008475




(ubiquinone) 1 alpha






subcomplex, 12




11726186_x_at
C12orf48
chromosome 12 open reading
NM_017915.2
0.008601




frame 48




11739972_at
NUAK1
NUAK family, SNF1-like
BU686994
0.008782




kinase, 1




11755294_x_at
NEB
nebulin
BC063136.1
0.008985


11740962_a_at
UBA5
ubiquitin-like modifier
NM_198329.2
0.009092




activating enzyme 5




11753867_a_at
NDUFA1
NADH dehydrogenase
AB451304.1
0.009324




(ubiquinone) 1 alpha






subcomplex, 1, 7.5 kDa




11757665_x_at
NDUFS5
NADH dehydrogenase
AA977996
0.009487




(ubiquinone) Fe-S protein 5,






15 kDa (NADH-coenzyme Q






reductase)




11757684_a_at
TPD52L2
tumor protein D52-like 2
A1806821
0.009563


11731068_s_at
FIGNL1
fidgetin-like 1
NM_022116.3
0.009587


11743064_at
CDC6
cell division cycle 6 homolog
CR598029.1
0.009677




(S.cerevisiae)




11746036_s_at
CBR1
carbonyl reductase 1
AK311219.1
0.009851


11729763_a_at
LSM10
LSM10, U7 small nuclear RNA
NM_032881.1
0.010114




associated




11719268_at
TNNC1
troponin C type 1 (slow)
NM_003280.2
0.010462


11758199_s_at
RAD23B
RAD23 homolog B
BG571600
0.010584




(S.cerevisiae)




11723291_a_at
NDUFA1
NADH dehydrogenase
NM_004541.3
0.010596




(ubiquinone) 1 alpha






subcomplex, 1, 7.5 kDa




11715771_a_at
MRPL13
mitochondrial ribosomal
NM_014078.4
0.010834




protein L13




11746174_s_at
IDH1
isocitrate dehydrogenase 1
BC012846.1
0.011295




(NADP+), soluble




11724432_x_at
TRAPPC2
trafficking protein particle
NM_001011658.2
0.01144




complex 2




11746489_x_at
GPAA1
glycosylphosphatidylinositol
BC006383.2
0.011462




anchor attachment protein 1






homolog (yeast)




11724120_a_at
TRIM59
tripartite motif-containing 59
NM_173084.2
0.01188


11764061_s_at
NDUFB3
NADH dehydrogenase
AA887183
0.012144




(ubiquinone) 1 beta






subcomplex, 3, 12 kDa




11758083_s_at
HPGD
hydroxyprostaglandin
AI743714
0.012171




dehydrogenase 15-(NAD)




11729715_a_at
CBR1
carbonyl reductase 1
NM_001757.2
0.012312


11734864_x_at
SARNP
SAP domain containing
NM_033082.3
0.012428




ribonucleoprotein




11717314_a_at
HAUS1
HAUS augmin-like complex,
NM_138443.3
0.012462




subunit 1




11751523_a_at
TMED5
transmembrane emp24
AK293308.1
0.012569




protein transport domain






containing 5




11754800_s_at
GFM1
G elongation factor,
AK092293.1
0.012699




mitochondrial 1




11746042_s_at
TRA2B
transformer 2 beta homolog
AK098191.1
0.01285




(Drosophila)




11736741_a_at
MKI67
antigen identified by
NM_001145966.1
0.012861




monoclonal antibody Ki-67




11729333_at
PADI1
peptidyl arginine deiminase,
NM_013358.2
0.013091




type!




11751291_a_at
SFXN4
sideroflexin 4
AY269785.1
0.013333


11717991_a_at
SIDT2
SIDI transmembrane family,
NM_001040455.1
0.013344




member 2




11748896_s_at
CCRL1
chemokine (C-C motif)
AK304461.1
0.013521




receptor-like 1




11716395_a_at
GPR56
G protein-coupled receptor 56
NM_001145774.1
0.013559


11729716_s_at
CBR1
carbonyl reductase 1
NM_001757.2
0.01399


11716063_at
TNC
tenascin C
NM_002160.2
0.014267


11758011_x_at
EEF1A1
eukaryotic translation
BI495952
0.014362




elongation factor 1 alpha 1




11720317_a_at
DAD1
defender against cell death 1
NM_001344.2
0.014754


11720186_s_at
MAD2L1
MAD2 mitotic arrest deficient-
NM_002358.3
0.014969




like 1 (yeast)




11725960_s_at
CALM3
calmodulin 3 (phosphorylase
NM_005184.2
0.015262




kinase, delta)




11730753_at
AGPAT5
1-acylglycerol-3-phosphate 0-
NM_018361.3
0.015361




acyltransferase 5






(lysophosphatidic acid






acyltransferase, epsilon)




11735839_at
STX19
syntaxin 19
NM_001001850.1
0.015426


11746655_a_at
ACAA1
acetyl-CoA acyltransferase 1
AK303251.1
0.015895


11744002_s_at
MTHFD2
methylenetetrahydrofolate
BG026531
0.015966




dehydrogenase (NADP+






dependent) 2,






methenyltetrahydrofolate






cyclohydrolase




11721296_a_at
NDUFB1
NADH dehydrogenase
NM_004545.3
0.016187




(ubiquinone) 1 beta






subcomplex, 1, 7 kDa




11725125_a_at
NEB
nebulin
NM_004543.3
0.016335


11716624_s_at
XPO1
exportin 1 (CRM1 homolog,
NM_003400.3
0.016341




yeast)




11759922_a_at
PARD3
par-3 partitioning defective 3
BC071566.1
0.016372




homolog (C.elegans)
















TABLE 19







Type III Dermis; Up-regulated











GeneTitan_ID
Gene
Title
Public ID
p





11733167_at
LRRN4CL
LRRN4 C-terminal like
BC053902.1
0.000101


11716549_s_at
ISLR
immunoglobulin superfamily
NM_005545.3
0.00021




containing leucine-rich repeat




11743191_a_at
NTM
neurotrimin
AI343272
0.000486


11725753_a_at
GRIA3
glutamate receptor, ionotrophic,
U10301.1
0.000741




AMPA 3




11741377_a_at
MMP2
matrix metallopeptidase 2
NM_001127891.1
0.001476




(gelatinase A, 72 kDa gelatinase,






72 kDa type IV collagenase)




11717765_a_at
MGLL
monoglyceride lipase
NM_007283.5
0.001622


11721372_at
TCF7L1
transcription factor 7-like 1 (T-cell
NM_031283.1
0.001646




specific, HMG-box)




11722839_at
LYAR
Ly1 antibody reactive homolog
AW958593
0.001955




(mouse)




11762135_at_
PTPRK
protein tyrosine phosphatase,
BC063596.1
0.002158




receptor type, K




11721467_s_at
CD276
CD276 molecule
NM_001024736.1
0.002325


11761134_at
MYST3
MYST histone acetyltransferase
BC142959.1
0.003233




(monocytic leukemia) 3




11720440_at
OLFML2B
olfactomedin-like 2B
NM_015441.1
0.003454


11745431_a_at
SVIL
supervillin
BC092440.1
0.003484


11739746_s_at
SVIL
supervillin
CD366976
0.003636


11757808_s_at
RERE
arginine-glutamic acid dipeptide
BM706668
0.003739




(RE) repeats




11725937_a_at
LGALS3
lectin, galactoside-binding,
BC053667.1
0.003825




soluble, 3




11720274_x_at
ALKBH6
alkB, alkylation repair homolog 6
NM_032878.3
0.003968




(E.coli)




11755955_a_at
FAP
fibroblast activation protein, alpha
AL832166.1
0.003989


11724619_at
RSPO3
R-spondin 3 homolog (Xenopus
NM_032784.3
0.004121




laevis)




11729170_x_at
DUSP10
dual specificity phosphatase 10
AF179212.1
0.004193


11752038_a_at
AQPEP
laeverin
BC068560.1
0.004865


11720846_at
CD248
CD248 molecule, endosialin
NM_020404.2
0.005206


11731143_a_at
GPR133
G protein-coupled receptor 133
NM_198827.3
0.005394


11728451_a_at
PCOLCE2
procollagen C-endopeptidase
NM_013363.2
0.005523




enhancer 2




11731682_at
CD70
CD70 molecule
NM_001252.3
0.005777


11716226_a_at
LIMA1
LIM domain and actin binding 1
BC136763.1
0.006288


11750244_a_at
MGLL
monoglyceride lipase
AK304844.1
0.00649


11762370_x_at
BNC1
basonuclin 1
L03427.1
0.006531


11729101_a_at
AKR1C2
aldo-keto reductase family 1,
NM_205845.1
0.006587




member C2 (dihyd rod iol






dehydrogenase 2; bile acid






binding protein; 3-alpha






hydroxysteroid dehydrogenase,






type III)




11731649_x_at
NTM
neurotrimin
AY358331.1
0.006934


11716238_at
ARHGAP1
Rho GTPase activating protein 1
NM_004308.2
0.006953


11728498_a_at
SVIL
supervillin
NM_003174.3
0.00696


11725517_x_at
ABCG1
ATP-binding cassette, sub-family G
NM_207627.1
0.007347




(WHITE), member 1




11728605_s_at
LIMS1
LIM and senescent cell antigen-
NM_033514.2
0.007353




like domains 1




11752843_x_at
SQSTM1
sequestosome 1
AK304877.1
0.007432


11757557_s_at
CADM1
cell adhesion molecule 1
H23245
0.007475


11718269_x_at
ANGPTL2
angiopoietin-like 2
AY358274.1
0.007782


11747944_a_at
PPFIA2
protein tyrosine phosphatase,
AK296380.1
0.008378




receptor type, f polypeptide






(PTPRF), interacting protein






(liprin), alpha 2




11761149_a_at
C5orf45
chromosome 5 open reading
AK293901.1
0.008409




frame 45




11737357_a_at
CNGA3
cyclic nucleotide gated channel
NM_001298.2
0.008783




alpha 3




11743250_a_at
MMP2
matrix metallopeptidase 2
BX357054
0.009096




(gelatinase A, 72 kDa gelatinase,






72 kDa type IV collagenase)




11725515_a_at
ABCG1
ATP-binding cassette, sub-family G
NM_207627.1
0.009131




(WHITE), member 1




11759362_x_at
PHKG1
phosphorylase kinase, gamma 1
BC051327.1
0.009194




(muscle)




11717802_s_at
ATF5
activating transcription factor 5
BE300055
0.009354


11723070_a_at
CYTL1
cytokine-like 1
NM_018659.2
0.009527


11731650_a_at
NTM
neurotrimin
NM_001048209.1
0.009599


11720845_a_at
CD248
CD248 molecule, endosialin
NM_020404.2
0.009838


11716322_s_at
PRKCDBP
protein kinase C, delta binding
NM_145040.2
0.009887




protein




11718658_s_at
CD34
CD34 molecule
NM_001773.2
0.010659


11747945_x_at
PPFIA2
protein tyrosine phosphatase,
AK296380.1
0.010696




receptor type, f polypeptide






(PTPRF), interacting protein






(liprin), alpha 2




11717764_x_at
MGLL
monoglyceride lipase
BC006230.2
0.010744


11743251_s_at
MMP2
matrix metallopeptidase 2
BX357054
0.010854




(gelatinase A, 72 kDa gelatinase,






72 kDa type IV collagenase)




11731303_a_at
DUSP10
dual specificity phosphatase 10
BC020608.1
0.010964


11719737_a_at
FAM134B
family with sequence similarity
BC053326.1
0.011265




134, member B




11758143_s_at
DUSP8
dual specificity phosphatase 8
BE350906
0.011421


11724441_x_at
PTGIS
prostaglandin 12 (prostacyclin)
NM_000961.3
0.011582




synthase




11737583_s_at
SGCD
sarcoglycan, delta (35 kDa
NM_001128209.1
0.01169




dystrophin-associated






glycoprotein)




11729541_a_at
CAMKK2
calcium/calmodulin-dependent
AB081337.1
0.011881




protein kinase kinase 2, beta




11737108_a_at
CCRL1
chemokine (C-C motif) receptor-
NM_178445.1
0.012




like 1




11721507_at
DVL3
dishevelled, dsh homolog 3
NM_004423.3
0.012974




(Drosophila)




11750245_x_at
MGLL
monoglyceride lipase
AK304844.1
0.013107


11737946_a_at
XPNPEP2
X-prolyl aminopeptidase
BC143901.1
0.01347




(aminopeptidase P) 2, membrane-






bound




11727155_a_at
TRIOBP
TRIO and F-actin binding protein
NM_007032.5
0.013526


11720441_x_at
OLFML2B
olfactomedin-like 2B
NM015441.1
0.01374


11727773_at
LARP6
La ribonucleoprotein domain
NM_197958.1
0.013995




family, member 6




11728499_x_at
SVIL
supervillin
NM_003174.3
0.01402


11745659_s_at
POM121
POM121 membrane glycoprotein
BC130587.1
0.014097


11752562_x_at
CDH13
cadherin 13, H-cadherin (heart)
AK294277.1
0.014197


11720617_at
TRIM9
tripartite motif-containing 9
NM_015163.5
0.014562


11757548_s_at
ADAMTSL1
ADAMTS-like 1
DB329733
0.014859


11753179_s_at
FAM134B
family with sequence similarity
BC030517.1
0.014991




134, member B




11729285_a_at
NFU1
NFU1 iron-sulfur cluster scaffold






homolog (S. cerevisiae)
NM_001002755.1
0.01519


11741286_a_at
CCRL1
chemokine (C-C motif) receptor-
AF110640.1
0.015787




like 1




11732315_a_at
SGCD
sarcoglycan, delta (35 kDa
AF010236.1
0.015795




dystrophin-associated






glycoprotein)




11715852_at
PDGFRB
platelet-derived growth factor
NM_002609.3
0.016136




receptor, beta polypeptide




11730404_at
MEX3B
mex-3 homolog B (C.elegans)
NM_032246.3
0.0163


11751986_at
MMP19
matrix metallopeptidase 19
U38320.1
0.016486


11731122_a_at
VASH2
vasohibin 2
BC051856.1
0.016505


11732785_a_at
C16orf45
chromosome 16 open reading
NM_001142469.1
0.017241




frame 45




11757765_s_at
SGCD
sarcoglycan, delta (35 kDa
AA401248
0.017347




dystroph in-associated






glycoprotein)




11743143_at
COX11
COX11 cytochrome c oxidase
AK293851.1
0.017504




assembly homolog (yeast)




11724142_s_at
RAB11FIP2
RAB11 family interacting protein 2
DB356544
0.017868




(class I)




11723075_a_at
BCL9L
B-cell CLL/lymphoma 9-like
AY296059.1
0.017989


11747704_a_at
CLDN11
claudin 11
AK294087.1
0.017998


11716376_at
SERPINA5
serpin peptidase inhibitor, clade A
NM_000624.4
0.018046




(alpha-1 antiproteinase,






antitrypsin), member 5




11756879_a_at
STARD9
StAR-related lipid transfer (START)
CR936665.1
0.018874




domain containing 9




11733166_at
LRRN4CL
LRRN4 C-terminal like
NM_203422.1
0.018933


11720163_at
VEGFC
vascular endothelial growth factor
NM_005429.2
0.018951




C




11754821_s_at
SLC38A1
solute carrier family 38, member 1
AI476037
0.019062


11720082_at
CBX6
chromobox homolog 6
NM_014292.3
0.020169


11762231_x_at
BBS1
Bardet-Biedl syndrome 1
AK294962.1
0.020213


11732462_at
ADAMTSL1
ADAMTS-like 1
AK123028.1
0.020317


11761563_x_at
HEATR1
HEAT repeat containing 1
BC062442.1
0.0204


11727714_at
KCNJ12
potassium inwardly-rectifying
NM_021012.4
0.020553




channel, subfamily J, member 12




11727780_a_at
SCARA5
scavenger receptor class A,
NM_173833.4
0.020636




member 5 (putative)




11749436_a_at
NFIC
nuclear factor I/C (CCAAT-binding
AK297825.1
0.020877




transcription factor)




11731209_s_at
C15orf59
chromosome 15 open reading
NM_001039614.1
0.021422




frame 59




11727125_a_at
PVRL3
poliovirus receptor-related 3
BE544927
0.021561


11744741_at
LOH3CR2A
loss of heterozygosity, 3,
AF086709.2
0.021592




chromosomal region 2, gene A




11717891_a_at
ECM1
extracellular matrix protein 1
BC023505.2
0.021868
















TABLE 20







Type III Dermis; Down-regulated











GeneTitan_ID
Gene
Title
Public ID
p





11727158_a_at
STRBP
spermatid perinuclear
NM_018387.3
0.000131




RNA binding protein




11756850_x_at
CCT8
chaperonin containing
CR612497.1
0.000172




TCP1, subunit 8 (theta)




11754000_x_at
CD58
CD58 molecule
CR456939.1
0.000222


11737761_a_at
HSD17B4
hydroxysteroid (17-beta)






dehydrogenase 4
NM_000414.2
0.000267


11754276_a_at
RAD23B
RAD23 homolog B (S.
BG501496
0.000343





cerevisiae)





11743094_at
SPRR4
small proline-rich protein
BC069445.1
0.000362




4




11724156_at
SULT1E1
sulfotransferase family
NM_005420.2
0.000395




1E, estrogen-preferring,






member 1




11749267_a_at
SRD5A1
steroid-5-alpha-
AK315996.1
0.000399




reductase, alpha






polypeptide 1 (3-oxo-5






alpha-steroid delta 4-






dehydrogenase alpha 1)




11720183_s_at
EEF1B2
eukaryotic translation
NM_001959.3
0.000428




elongation factor 1 beta 2




11737053_s_at
HSPD1
heat shock 60 kDa protein
NM_002156.4
0.000467




1 (chaperonin)




11740377_a_at
PXMP4
peroxisomal membrane
AK297018.1
0.000581




protein 4, 24 kDa




11726318_s_at
EEF1G
eukaryotic translation
NM_001404.4
0.000583




elongation factor 1






gamma




11720184_x_at
EEF1B2
eukaryotic translation
NM_001959.3
0.000595




elongation factor 1 beta 2




11746149_x_at
BCHE
butyrylcholinesterase
M16474.1
0.000611


11737762_x_at
HSD17B4
hydroxysteroid (17-beta)
NM_000414.2
0.000646




dehydrogenase 4




11739725_a_at
TC2N
tandem C2 domains,
NM_001128595.1
0.000648




nuclear




11754918_s_at
HMGCS1
3-hydroxy-3-
AK095492.1
0.000648




methylglutaryl-CoA






synthase 1 (soluble)




11741799_a_at
BCOR
BCL6 corepressor
AF317391.1
0.000649


11736831_a_at
SEC23B
Sec23 homolog B (S.
NM_032986.3
0.000656





cerevisiae)





11744777_s_at
DPY30
dpy-30 homolog (C.
BC015970.1
0.000676





elegans)





11754418_s_at
G3BP1
GTPase activating protein
AK130003.1
0.000682




(SH3 domain) binding






protein 1




11723250_a_at
EML2
echinoderm microtubule
NM_012155.1
0.00072




associated protein like 2




11752369_a_at
IMPDH2
IMP (inosine 5′-
AK293397.1
0.000726




monophosphate)






dehydrogenase 2




11729643_s_at
TPD52
tumor protein D52
CB219128
0.000732


11755057_s_at
ATP2C1
ATPase, Ca++
AB037768.1
0.000739




transporting, type 2C,






member 1




11716946_s_at
TM9SF3
transmembrane 9
AF269150.1
0.000773




superfamily member 3




11756300_a_at
ANP326
acidic (leucine-rich)
BX432546
0.000781




nuclear phosphoprotein






32 family, member B




11716134_a_at
MTOR
mechanistic target of
NM_004958.3
0.000785




rapamycin






(serine/threonine kinase)




11755203_x_at
RPL21
ribosomal protein L21
BX647669.1
0.000869


11730938_x_at
PYCR1
pyrroline-5-carboxylate
NM_153824.1
0.000877




reductase 1




11750545_a_at
CNOT7
CCR4-NOT transcription
BC007315.2
0.000884




complex, subunit 7




11727826_a_at
C2orf56
chromosome 2 open
BC004548.2
0.00093




reading frame 56




11718344_a_at
CNOT7
CCR4-NOT transcription
NM_013354.5
0.000947




complex, subunit 7




11756600_a_at
TPD52
tumor protein D52
AK308983.1
0.000999


11734619_x_at
ALOX156
arachidonate 15-
NM_001141.2
0.001036




lipoxygenase, type B




11715621_at
UFC1
ubiquitin-fold modifier
NM_016406.3
0.001145




conjugating enzyme 1




11715958_s_at
RPL7
ribosomal protein L7
NM_000971.3
0.001233


11748713_a_at
ASPM
asp (abnormal spindle)
AY971957.1
0.001256




homolog, microcephaly






associated (Drosophila)




11758707_s_at
C5orf25
chromosome 5 open
DB526316
0.001417




reading frame 25




200081_PM_s_at
RPS6
ribosomal protein S6
BE741754
0.00144


11726299_x_at
LGALS8
lectin, galactoside-
AF342815.1
0.001452




binding, soluble, 8




11756210_a_at
RCL1
RNA terminal phosphate
AL582781
0.001477




cyclase-like 1




11743604_s_at
RRM1
ribonucleotide reductase
BE618815
0.001487




M1




11729641_a_at
TPD52
tumor protein D52
BG389015
0.001493


11718461_at
SLC39A11
solute carrier family 39
NM_139177.3
0.001532




(metal ion transporter),






member 11




11725053_x_at
TOP1MT
topoisomerase (DNA) I,
NM_052963.1
0.001534




mitochondrial




11758027_s_at
HOOK1
hook homolog 1
CD243255
0.001606




(Drosophila)




11745205_s_at
TPD52
tumor protein D52
BC018117.1
0.001623


11760342_a_at
PPP3CB
protein phosphatase 3,
M29550.1
0.001681




catalytic subunit, beta






isozyme




11725875_at
WDR66
WD repeat domain 66
NM_144668.4
0.001791


11739308_s_at
DLG1
discs, large homolog 1
BM681931
0.001815




(Drosophila)




11719666_a_at
STMN1
stathmin 1
BC082228.1
0.001852


11752283_a_at
ALOX15B
arachidonate 15-
AK298095.1
0.001904




lipoxygenase, type B




11723312_a_at
PXMP2
peroxisomal membrane
NM_018663.1
0.001916




protein 2, 22 kDa




11719667_s_at
STMN1
stathmin 1
BC082228.1
0.001961


11728791_at
THRSP
thyroid hormone
NM_003251.2
0.001966




responsive




11734917_a_at
METTL4
methyltransferase like 4
BQ009802
0.001983


11717236_x_at
RPS7
ribosomal protein S7
NM_001011.3
0.002022


11754132_x_at
COMT
catechol-0-
BT007125.1
0.002101




methyltransferase




11743372_s_at
PTGES3
prostaglandin E synthase
CR611609.1
0.002174




3 (cytosolic)




11730411_a_at
PXMP4
peroxisomal membrane
BF057649
0.002209




protein 4, 24 kDa




200063_PM_s_at
NPM1
nucleophosmin
BC002398.1
0.002233




(nucleolar






phosphoprotein B23,






numatrin)




11722642_a_at
DGAT2
diacylglycerol 0-
BC015234.1
0.002305




acyltransferase 2




11752550_x_at
CCT8
chaperonin containing
AK293705.1
0.002336




TCP1, subunit 8 (theta)




11758217_s_at
FAM108C1
family with sequence
CB997200
0.002358




similarity 108, member






C1




11717182_a_at
PDS5A
PDS5, regulator of
NM_001100399.1
0.002387




cohesion maintenance,






homolog A (S.cerevisiae)




11717153_a_at
C20orf3
chromosome 20 open
NM_020531.2
0.002394




reading frame 3




11742779_a_at
HIBCH
3-hydroxyisobutyryl-CoA
U66669.1
0.002431




hydrolase




11744264_a_at
SEC11C
SEC11 homolog C (S.
AI816180
0.002433





cerevisiae)





11753788_x_at
CDKN3
cyclin-dependent kinase
AF213040.1
0.002434




inhibitor 3




11758709_s_at
RDH11
retinol dehydrogenase 11
A1972157
0.002449




(all-trans/9-cis/11-cis)




11727320_at
IGFL2
IGF-like family member 2
NM_001002915.2
0.002476


11730803_a_at
PRPF38B
PRP38 pre-mRNA
NM_018061.2
0.002515




processing factor 38






(yeast) domain






containing B




11753740_x_at
CYB5A
cytochrome b5 type A
CR456990.1
0.002572




(microsomal)




11718246_a_at
KIAA0146
KIAA0146
NM_001080394.1
0.002609


11720768_at
METTL9
methyltransferase like 9
NM_016025.3
0.002613


11755017_a_at
CHCHD7
coiled-coil-helix-coiled-
AK098285.1
0.002843




coil-helix domain






containing 7




11732128_s_at
CCT4
chaperonin containing
BC106934.1
0.002855




TCP1, subunit 4 (delta)




11744900_x_at
FADS2
fatty acid desaturase 2
AF108658.1
0.002865


11715881_a_at
DAP3
death associated protein
NM_004632.2
0.002925




3




11756875_x_at
COMMD6
COMM domain
CR603325.1
0.002962




containing 6




11756783_a_at
TF
transferrin
BC045772.1
0.002967


11723197_at
HNRNPA3
heterogeneous nuclear
BX434302
0.003022




ribonucleoprotein A3




11729941_at
TMEM56
transmembrane protein
NM_152487.2
0.003035




56




11716813_a_at
GATM
glycine
AK298350.1
0.003053




amidinotransferase (L-






arginine:glycine






amidinotransferase)




11721242_s_at
FDFT1
farnesyl-diphosphate
NM_004462.3
0.003125




farnesyltransferase 1




11749786_x_at
HNRNPF
heterogeneous nuclear
AK296696.1
0.003153




ribonucleoprotein F




11723313_s_at
PXMP2
peroxisomal membrane
NM_018663.1
0.003162




protein 2, 22 kDa




11727286_a_at
ZNF323
zinc finger protein 323
NM_001135215.1
0.003185


11720813_at
INTS10
integrator complex
NM_018142.2
0.003216




subunit 10




11749874_a_at
OXCT1
3-oxoacid CoA
AK299668.1
0.003244




transferase 1




11757320_x_at
CYB5A
cytochrome b5 type A
AA706740
0.003263




(microsomal)




11733591_a_at
C1orf204
chromosome 1 open
NM_001134233.1
0.003297




reading frame 204




11718135_at
PRPS2
phosphoribosyl
NM_001039091.1
0.003316




pyrophosphate






synthetase 2




11716302_s_at
ACSL1
acyl-CoA synthetase long-
NM_001995.2
0.003359




chain family member 1




11744392_a_at
PAPOLA
poly(A) polymerase alpha
BC000927.1
0.003388


11741012_a_at
SC4MOL
sterol-C4-methyl oxidase-
AK292418.1
0.00342




like






synovial sarcoma






translocation,




11722800_a_at
SS18
chromosome 18
CB241009
0.003458


11755439_x_at
UBAC2
UBA domain containing 2
BC053346.1
0.003608


11756674_s_at
STRBP
spermatid perinuclear
CR596677.1
0.003641




RNA binding protein









The gene expression signatures provided in Table 9-20 can be used to classify the type of periorbital dyschromia exhibited by person. For example, a person can be classified as exhibiting Type I periorbital dyschromia when the gene expression signature of a skin tissue sample obtained from the periorbital region of the person corresponds to 15% or more (e.g., more than 25%, 50%, 75%, 80%, 90% or even up to 100%) of the genes from Tables 9 to 12. In other words, a person can be classified as exhibiting Type I periorbital dyschromia if the top 100 upregulated genes in the epidermis comprise 15% or more the genes in Table 9; the top 100 downregulated genes in the epidermis comprise 15% or more of the genes in Table 10; the top 100 upregulated genes in the dermis comprise 15% or more of the genes in Table 11; and/or the top 100 downregulated genes in the dermis comprise 15% or more of the genes in Table 12. Similarly, a person can be classified as exhibiting Type II or Type III periorbital dyschromia when the gene expression signature of the skin tissue sample comprises significantly upregulated and downregulated genes that correspond to 15% or more of the genes in at least one of Tables 13 to 16 or Tables 17 to 20, respectively.


Theme analysis may be used to identify biological or phenotypic themes associated with the gene expression data that correspond to Type I, Type II and Type III periorbital dyschromia. Theme analysis is a statistical analysis-based method for detecting biological patterns in gene expression data. The method uses an ontology of controlled vocabulary terms developed by the Gene Ontology (“GO”) Consortium [Ashburner, M. et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet, 25, 25-29] that describe the biological processes, molecular functions and cellular components associated with gene products. Analysis involves statistical comparison of a regulated list of genes and a larger reference list of all the expressed genes, to determine if genes annotated to specific GO terms are significantly enriched in the regulated list. This analysis may reveal biological patterns when multiple genes associated with a given GO term occur on the regulated list at a frequency greater than expected by chance. Such analysis may be performed using Theme Extractor proprietary software and an algorithm that calculates the p-value of each ontology term. Data may be analyzed for statistical significance, for example, by the Fisher's exact test. Conventional approaches and statistical methods such as, for example, Gene Set Enrichment Analysis described by Subramanian, A., et al., in “Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles,” Proc. Natl. Acad Sci U.S.A, 102, 15545-155501 (2005) are suitable for conducting theme analysis herein.


Table 21 shows Gene Ontology Biological Process terms that are significantly enriched in the epidermis of subjects with Type I periorbital dyschromia. The results in Table 21 were generated from differentially expressed genes in those subjects with top ranked genes shown in Tables 13 and 14. Only the most highly significant themes are shown (p-value≤1×10−2 to p≥1×10−5) and the theme analysis was done separately for the up- and down-regulated genes. The level of indentation in the terms column (i.e., the number of dots preceding the term) generally indicates the level in the GO hierarchy and parent/child relationships between terms.










TABLE 21








Type I Epidermis vs N-D










Gene Ontology Biological Process Terms
Up
Down
Directional





GO:0002764 immune response-regulating

**



signaling pathway





GO:0002758 innate immune response-activating

***



signal transduction





GO:0002224 toll-like receptor signaling pathway

**



GO:0048468 cell development
**




GO:0002376 immune system process

****



GO:0002252 immune effector process

****



GO:0002253 activation of immune response

****



GO:0002218 activation of innate immune

***



response





GO:0006955 immune response

****



GO:0045087 innate immune response

****



GO:0071383 cellular response to steroid
**




hormone stimulus





GO:0006954 inflammatory response

*



GO:0045047 protein targeting to ER

****



GO:0032984 macromolecular complex

****



disassembly





GO:0016568 chromatin modification
*




GO:0050776 regulation of immune response

****



GO:0006749 glutathione metabolic process

**



GO:0019752 carboxylic acid metabolic process

*



GO:0007154 cell communication
*




GO:0016042 lipid catabolic process

*



GO:0070588 calcium ion transmembrane
*




transport





*p-value between 1 × 10−2 and 1 × 10−3


**p-value between 1 × 10−3 and 1 × 10−4


***p-value between 1 × 10−4 and 1 × 10−5


****p-value less than 1 × 10−5






Table 21 shows Gene Ontology Biological Process terms that are significantly enriched in the epidermis of subjects with Type II periorbital dyschromia. The results in Table 14 were generated from differentially expressed genes in those subjects with top ranked genes shown in Tables 13 and 14. Only the most highly significant themes are shown (p≤1×10−2), and the theme analysis was done separately for the up- and down-regulated genes.










TABLE 22








Terms Type II Epidermis vs N-D










Gene Ontology Biological Process
Up
Down
Directional





GO:0042770 signal transduction in

****



response to DNA damage





GO:0072331 signal transduction by

****



p53 class mediator





GO:0007173 epidermal growth factor

**



receptor signaling pathway





GO:0001942 hair follicle development

****



GO:0008544 epidermis development

****



GO:0045444 fat cell differentiation
*




GO:0019882 antigen processing and

****



presentation





GO:0071453 cellular response to oxygen


**


levels





GO:0071456 cellular response to hypoxia


**


GO:0031960 response to corticosteroid
*




stimulus





GO:0033554 cellular response to stress

****



GO:0006281 DNA repair

**



GO:0000077 DNA damage checkpoint

****



GO:0006950 response to stress

**



GO:0009268 response to pH

**



GO:0006886 intracellular protein

****



transport





GO:0006605 protein targeting

****



GO:0015031 protein transport

****



GO:0046907 intracellular transport

****



GO:0048193 Golgi vesicle transport

**



GO:0006839 mitochondrial transport

****



GO:0015986 ATP synthesis coupled

***



proton transport





GO:0016568 chromatin modification
**




GO:0031326 regulation of cellular
**




biosynthetic process





GO:0006521 regulation of cellular amino

****



acid metabolic process





GO:0010565 regulation of cellular ketone

****



metabolic process





GO:0051171 regulation of nitrogen





compound metabolic process





GO:0051726 regulation of cell cycle

**



GO:0045454 cell redox homeostasis

**



GO:0032652 regulation of interleukin-1
**




production





GO:0035383 thioester metabolic process

****



GO:0006637 acyl-CoA metabolic process

****



GO:0006099 tricarboxylic acid cycle

****



GO:0006635 fatty acid beta-oxidation

**



GO:0018108 peptidyl-tyrosine
**




phosphorylation





GO:0006082 organic acid metabolic

****



process





GO:0006520 cellular amino acid

**



metabolic process





GO:0043038 amino acid activation

****



GO:0006091 generation of precursor

****



metabolites and energy





GO:0006096 glycolysis

**



GO:0006119 oxidative phosphorylation

****



GO:0042773 ATP synthesis coupled

****



electron transport





GO:0045333 cellular respiration

****



GO:0007049 cell cycle

****



GO:0005975 carbohydrate metabolic

***



process





GO:0006007 glucose catabolic process

***



GO:0016052 carbohydrate catabolic

****



process





GO:0055114 oxidation-reduction process

****









Table 23 shows Gene Ontology Biological Process terms that are significantly enriched in the epidermis of subjects with Type III periorbital dyschromia. The results in Table 23 were generated differentially expressed genes in those subjects with top ranked genes shown in Tables 17 and 18. Only the most highly significant themes are shown (p-value <1×10−2), and the theme analysis was done separately for the up- and down-regulated genes.










TABLE 23








Type III Epidermis



vs N-D










Gene Ontology Biological Process Terms
Up
Down
Directional





GO:0048731 system development
**




GO:0048856 anatomical structure development
***




GO:0030154 cell differentiation
**




GO:0070482 response to oxygen levels
*




GO:0033365 protein localization to organelle

**



GO:0045047 protein targeting to ER

**



GO:0006605 protein targeting

**



GO:0006612 protein targeting to membrane

**



GO:0006839 mitochondrial transport

**



GO:0001934 positive regulation of protein
**




phosphorylation





GO:0051347 positive regulation of transferase
**




activity





GO:0010627 regulation of intracellular protein
**




kinase cascade





GO:0080135 regulation of cellular response
*




to stress





GO:0051320 S phase

***



GO:0006414 translational elongation

****



GO:0006091 generation of precursor

***



metabolites and energy





GO:0006119 oxidative phosphorylation

**



GO:0022900 electron transport chain

****



GO:0045333 cellular respiration

****



GO:0055114 oxidation-reduction process

***









Table 24 shows Gene Ontology Biological Process terms that are significantly enriched in the dermis of subjects with Type I periorbital dyschromia. The results in Table 24 were generated from differentially expressed genes in those subjects with top ranked genes shown in Tables 11 and 12. Only the most highly significant themes are shown (p≤1×10−2), and the theme analysis was done separately for the up- and down-regulated genes.










TABLE 24








Type I Dermis vs N-D










Gene Ontology Biological Process Terms
Up
Down
Directional





GO:0000165 MAPK cascade
**




GO:0048011 nerve growth factor receptor
*




signaling pathway





GO:0007179 transforming growth factor beta
*




receptor signaling pathway





GO:0050877 neurological system process
***




GO:0007596 blood coagulation
*




GO:0050878 regulation of body fluid levels
*




GO:0001944 vasculature development
****




GO:0001568 blood vessel development
****




GO:0048514 blood vessel morphogenesis
****




GO:0001525 angiogenesis
****




GO:0030183 B cell differentiation


*


GO:0007399 nervous system development
****




GO:0022008 neurogenesis
***




GO:0048699 generation of neurons
***




GO:0030182 neuron differentiation
**




GO:0048666 neuron development
**




GO:0048870 cell motility
**




GO:0043627 response to estrogen stimulus
**




GO:0006281 DNA repair

****



GO:0001666 response to hypoxia
*




GO:0006979 response to oxidative stress
*




GO:0009611 response to wounding
***




GO:0070482 response to oxygen levels
**




GO:0033365 protein localization to organelle

****



GO:0045047 protein targeting to ER

****



GO:0006605 protein targeting

****



GO:0015031 protein transport

****



GO:0046907 intracellular transport

****



GO:0034330 cell junction organization
**




GO:0030198 extracellular matrix organization
*




GO:0007010 cytoskeleton organization
*




GO:0051276 chromosome organization

***



GO:0032200 telomere organization

**



GO:0006338 chromatin remodeling

*



GO:0043408 regulation of MAPK cascade
***




GO:0051924 regulation of calcium ion transport
*




GO:0010827 regulation of glucose transport

***



GO:0030334 regulation of cell migration
****




GO:0010564 regulation of cell cycle process

**



GO:0010646 regulation of cell communication
****




GO:0022402 cell cycle process

**



GO:0022403 cell cycle phase

***



GO:0007049 cell cycle

**



GO:0000278 mitotic cell cycle

****



GO:0007154 cell communication
****




GO:0008202 steroid metabolic process
*




GO:0006694 steroid biosynthetic process

**



GO:0016126 sterol biosynthetic process

****



GO:0006695 cholesterol biosynthetic process

****



GO:0061061 muscle structure development
*









Table 25 shows Gene Ontology Biological Process terms that are significantly enriched in the dermis of subjects with Type II periorbital dyschromia. The results in Table 25 were generated from differentially expressed genes in those subjects with top ranked genes shown in Tables 15 and 16. Only the most highly significant themes are shown (p<1×10−2), and the theme analysis was done separately for the up- and down-regulated genes.










TABLE 25








Type II Dermis vs. N-D










Gene Ontology Biological Process Terms
Up
Down
Directional





GO:0019226 transmission of nerve impulse
*




GO:0050877 neurological system process
**




GO:0007399 nervous system development
**




GO:0022008 neurogenesis
****




GO:0048699 generation of neurons
***




GO:0030182 neuron differentiation
***




GO:0048666 neuron development
***




GO:0031175 neuron projection development
**




GO:0007409 axonogenesis
**




GO:0048667 cell morphogenesis involved in
**




neuron differentiation





GO:0048468 cell development
***




GO:0006281 DNA repair

****



GO:0033365 protein localization to organelle

****



GO:0070972 protein localization to endoplasmic

****



reticulum





GO:0006605 protein targeting

****



GO:0006612 protein targeting to membrane

****



GO:0015031 protein transport

****



GO:0006810 transport

****



GO:0051641 cellular localization

****



GO:0016043 cellular component organization

****



GO:0022411 cellular component disassembly

****



GO:0030198 extracellular matrix organization
*




GO:0032984 macromolecular complex

****



disassembly





GO:0043624 cellular protein complex

****



disassembly





GO:0071156 regulation of cell cycle arrest

**



GO:0010646 regulation of cell communication
*




GO:0051320 S phase

**



GO:0044248 cellular catabolic process

****



GO:0006457 protein folding

**



GO:0007049 cell cycle

*



GO:0000278 mitotic cell cycle

**



GO:0007154 cell communication
*




GO:0006694 steroid biosynthetic process

**



GO:0006695 cholesterol biosynthetic process

***









Table 26 shows Gene Ontology Biological Process terms that are significantly enriched in the epidermis of subjects with Type III periorbital dyschromia. The results in Table 26 were generated from differentially expressed genes in those subjects with top ranked genes shown in Tables 19 and 20. Only the most highly significant themes are shown (p≤1×10−2), and the theme analysis was done separately for the up- and down-regulated genes.










TABLE 26








Type III Dermis vs. N-D










Gene Ontology Biological Process Terms
Up
Down
Directional





GO:0007155 cell adhesion
**




GO:0019226 transmission of nerve impulse
*




GO:0051403 stress-activated MAPK cascade
***




GO:0007254 JNK cascade
**




GO:0000165 MAPK cascade
****




GO:0016055 Wnt receptor signaling pathway
*




GO:0050877 neurological system process
**




GO:0001944 vasculature development
***




GO:0001568 blood vessel development
**




GO:0048514 blood vessel morphogenesis
**




GO:0022008 neurogenesis
**




GO:0030182 neuron differentiation
**




GO:0048666 neuron development
**




GO:0061061 muscle structure development
**




GO:0042692 muscle cell differentiation
**




GO:0048646 anatomical structure formation
****




involved in morphogenesis





GO:0033554 cellular response to stress

*



GO:0006281 DNA repair

****



GO:0001666 response to hypoxia
**




GO:0070482 response to oxygen levels
***




GO:0036293 response to decreased oxygen levels
**




GO:0034613 cellular protein localization

****



GO:0033365 protein localization to organelle

****



GO:0070972 protein localization to endoplasmic

****



reticulum





GO:0045047 protein targeting to ER

****



GO:0006886 intracellular protein transport

****



GO:0006605 protein targeting

****



GO:0006612 protein targeting to membrane

****



GO:0015031 protein transport

****



GO:0006811 ion transport
***




GO:0006812 cation transport
**




GO:0030001 metal ion transport
**




GO:0050000 chromosome localization

****



GO:0022411 cellular component disassembly

****



GO:0034330 cell junction organization
*




GO:0034622 cellular macromolecular complex

****



assembly





GO:0007010 cytoskeleton organization
**




GO:0000226 microtubule cytoskeleton

**



organization





GO:0070925 organelle assembly

****



GO:0051276 chromosome organization

***



GO:0032200 telomere organization

***



GO:0000819 sister chromatid segregation

****



GO:0043408 regulation of MAPK cascade
****




GO:0010646 regulation of cell communication
****




GO:0019725 cellular homeostasis
*




GO:0022402 cell cycle process

****



GO:0035383 thioester metabolic process

**



GO:0071616 acyl-CoA biosynthetic process

**



GO:0035337 fatty-acyl-CoA metabolic process

***



GO:0044248 cellular catabolic process

****



GO:0046394 carboxylic acid biosynthetic process

***



GO:0044255 cellular lipid metabolic process

*



GO:0006631 fatty acid metabolic process

**



GO:0019752 carboxylic acid metabolic process

****



GO:0007049 cell cycle

****



GO:0007154 cell communication
***




GO:0005975 carbohydrate metabolic process

**



GO:0006694 steroid biosynthetic process

**



GO:0006695 cholesterol biosynthetic process

****



GO:0008610 lipid biosynthetic process

**



GO:0055114 oxidation-reduction process

**









The theme analysis of Type I periorbital dyschromia may be broadly correlated to cellular physiological responses associated with cell stress and cell communication in the epidermis and metabolism, stress and structure in the dermis. In particular, a theme analysis of epidermal gene expression related to Type I periorbital dyschromia revealed, generally, an increase in gene expression associated with calcium ion trans-membrane transport, chromatin modification and cell communication and a decrease in gene expression associated with immune response and toll-like receptor pathway. Dermal gene expression revealed the following general themes: an increase in gene expression associated with response to estrogen stimulus, regulation of body fluid levels, regulation of cell migration, hypoxic stress, oxidative damage, response to wounding, blood vessel development, extracellular matrix organization, cytoskeleton organization, cell junction organization, neuron development and muscle structure development and a decrease in gene expression associated with cholesterol synthesis, regulation of glucose transport and protein transport.


The theme analysis of Type II periorbital dyschromia appears to show a general correlation with the cellular physiological responses associated with metabolism and energy production, cell stress and cell communication in the epidermis and metabolism and structure in the dermis. In particular, a theme analysis of epidermal gene expression related to Type II periorbital dyschromia revealed, generally, an increase in gene expression associated with chromatin modification and a decrease in gene expression associated with glycolysis, ATP synthesis, cell cycle, TCA cycle, response to pH, antigen presentation and processing. Dermal gene expression revealed the following general themes: an increase in gene expression associated with transmission of nerve impulses and neuron development and a decrease in gene expression associated with cholesterol synthesis.


Theme analysis of Type III periorbital dyschromia may be broadly correlated to cellular physiological responses associated with metabolism in the epidermis and metabolism and nutrition, stress and cell communication, and structure in the dermis. In particular, a theme analysis of epidermal gene expression related to Type III periorbital dyschromia revealed, generally, a decrease in gene expression associated with oxidation and reduction process. A theme analysis of dermal gene expression revealed the following general themes: an increase in gene expression associated with ion and metal transport, regulation of the MAPK signaling cascade, regulation of Jun Kinase activity, blood vessels and neuron development and a decrease in gene expression associated with cholesterol synthesis, fatty acid metabolic process, microtubule cytoskeleton organization, organelle assembly, and carbohydrate metabolic process.


Products for treating different types of periorbital dyschromia are described in U.S. Provisional Application No. 61/798,278, filed by Osorio, et al., on Mar. 15, 2013 and titled “Array of Products.” Methods of treating different types of periorbital dyschromia are described in U.S. Provisional App. No. 61/798,340, filed by Osorio et al., on Mar. 15, 2013 and titled “Methods of Treating Periorbital Dyschromia.”


The dimensions and values disclosed herein are not to be understood as being strictly limited to the exact numerical values recited. Instead, unless otherwise specified, each such dimension is intended to mean both the recited value and a functionally equivalent range surrounding that value. For example, a dimension disclosed as “40 mm” is intended to mean “about 40 mm” Additionally, properties described herein may include one or more ranges of values. It is to be understood that these ranges include every value within the range, even though the individual values in the range may not be expressly disclosed.


All documents cited in the Detailed Description of the Invention are, in relevant part, incorporated herein by reference; the citation of any document is not to be construed as an admission that it is prior art with respect to the present invention. To the extent that any meaning or definition of a term in this document conflicts with any meaning or definition of the same term in a document incorporated by reference, the meaning or definition assigned to that term in this document shall govern.


While particular embodiments of the present invention have been illustrated and described, it would be obvious to those skilled in the art that various other changes and modifications can be made without departing from the spirit and scope of the invention. It is therefore intended to cover in the appended claims all such changes and modifications that are within the scope of this invention.

Claims
  • 1. A method of identifying periorbital dyschromia, comprising: (a) identifying skin in a periorbital region of a person comprising periorbital dyschromia;(b) capturing an image of the identified skin in the periorbital region with an image capture device;(c) analyzing the image with a computer, wherein at least a portion of the image is color corrected and a measured imaging value is generated from the color corrected portion, and the measured imaging value is normalized relative to an imaging value obtained from a cheek;(d) identifying the person as exhibiting Type I periorbital dyschromia when the portion of skin is disposed in Zone 1, Zone 2 and Zone 3 of the periorbital region and the measured imaging value corresponds to at least one value from Table 1, identifying the person as exhibiting Type II periorbital dyschromia when the portion of skin is disposed in only in Zone 1 of the periorbital region and the measured imaging value corresponds to at least one value from Table 2, or identifying the person as exhibiting Type III periorbital dyschromia when the portion of skin is disposed in Zone 1 and Zone 2 and the measured imaging value corresponds to at least one value from Table 3; and(e) communicating the type of periorbital dyschromia identified in (d) to the person.
  • 2. The method of claim 1, wherein the measured imaging values includes at least one RGB color imaging value.
  • 3. The method of claim 1, wherein the imaging values are measured using an RGB imaging technique.
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