Monoclonal Antibodies for Ebola and Marburg Viruses

Abstract
Described herein are a number of Ebola and Marburg monoclonal antibodies.
Description
BACKGROUND OF THE INVENTION

Ebola and Marburg viruses are highly pathogenic and virulent viruses causing rapidly fatal hemorrhagic fever in humans.


SUMMARY OF THE INVENTION

According to a first aspect of the invention, there is provided a monoclonal antibody comprising an amino acid sequence deduced from 1 H3-light (SEQ ID No. 2); 2G4-light (SEQ ID No. 4); 4G7-light (SEQ ID No. 6): 5D2-light (SEQ ID No. 8); 5E6-light (SEQ ID No. 10); 7C9-light (SEQ ID No. 12): 7G4-light (SEQ ID No. 14), 10C8-light(SEQ ID No. 16), 1H3-heavy (SEQ ID No. 1): 2G4-heavy (SEQ ID No. 3); 4G7-heavy (SEQ ID No. 5); 5D2-heavy (SEQ ID No. 7), 5E6-heavy (SEQ ID No. 9), 7C9-heavy (SEQ ID No. 11), 7G4 heavy (SEQ ID No. 13) and 10C8-heavy (SEQ ID No. 15).


According to a second aspect of the invention, there is provided a method of preparing a chimeric antibody comprising;


providing an expression vector comprising a nucleic acid molecule encoding a constant region domain of a human light chain or heavy chain genetically linked to a nucleic acid encoding a light chain variable region selected from the group consisting of 1H3-light (SEQ ID No. 2): 2G4-light (SEQ ID No. 4); 4G7-light (SEQ ID No. 6); 5D2-light (SEQ ID No. 8); 5E6-light (SEQ ID No. 10); 7C9-light (SEQ ID No. 12); 7G4-light (SEQ ID No. 14) and 10C8-light(SEQ ID No. 16) or a heavy chain variable region selected from the group consisting of 1H3-heavy (SEQ ID No. 1): 2G4-heavy (SEQ ID No. 3); 4G7-heavy (SEQ ID No. 5); 5D2-heavy (SEQ ID No. 7), 5E6-heavy (SEQ ID No. 9), 7C9-heavy (SEQ ID No. 11) 7G4-heavy (SEQ ID No. 13) and 10C8-heavy (SEQ ID No. 15):


expressing the expression vector in a suitable host; and


preparing a recombinant antibodies comprising:


providing a nucleotide sequence selected from the group consisting of 1H3-light (SEQ ID No. 2); 2G4-light (SEQ ID No. 4); 4G7-light (SEQ ID No. 6); 5D2-light (SEQ ID No. 8); 5E6-light (SEQ ID No. 10); 7C9-light (SEQ ID No. 12); 7G4-light (SEQ ID No. 14), 10C8-light(SEQ ID No. 16), 1H3-heavy (SEQ ID No. 1); 2G4-heavy (SEQ ID No. 3); 4G7-heavy (SEQ ID No. 5); 5D2-heavy (SEQ ID No. 7), 5E6-heavy (SEQ ID No. 9), 7C9-heavy (SEQ ID No. 11), 7G4-heavy (SEQ ID No. 3) and 10C8-heavy (SEQ ID No. 15);


modifying said nucleic acid sequence such that at least one but fewer than about 30 of the amino acid residues encoded by said nucleic acid sequence has been changed or deleted without disrupting antigen binding of said peptide; and


expressing and recovering said modified nucleotide sequence.





BRIEF DESCRIPTION OF THE DRAWINGS


FIG. 1. Kaplan-Meier survival curve of mice infected with MA-ZEBOV and treated with MAbs 1 day after infection. Survival curve of MS-Ebola virus-infected mice treated with 100 μg of MAbs. Mice were intraperitoneally treated with 100 μg of each MAb on day 1. Control mice were given equal volumes of PBS.



FIG. 2. Weight changes of GPA-Ebola infected guinea pigs treated with MAbs. Weight changes of virus-infected guinea pigs treated with cocktail of MAbs. Guinea pigs were intraperitoneally treated with either 5D2, 5E6, 7C9, 7G4 or 10C8 (3 mg/treatment) on day 1 and 4G7+1H3+2G4[(2 mg+1 mg+1 mg)/treatment] on day 2. Control guinea pig were given equal volume of PBS. The results are shown as the means and standard deviations of 6 guinea pigs.



FIG. 3. Weight changes of GPA-Ebola infected guinea pigs treated with MAbs. Weight changes of virus-infected guinea pigs treated with cocktail of MAbs. Guinea pigs were intraperitoneally treated with either 5D2, 5E6, 7C9, 7G4 or 10C8 (3 mg/treatment) on day 1 and 4G7+1H3+2G4 [(2 mg+1 mg+1 mg)/treatment] on day 2. Control guinea pig were given equal volume of PBS. The results are shown as the group weight of 6 guinea pigs.



FIG. 4. Immunoprecipitation, 293T cells were transfected with pCAGGS-ZEbovGP1,2 by using Fugene 6, After 48 hrs, cells were collected and washed 2× with cold PBS before being lysed with 2× RIPA buffer. After clarifying the cell lysate, 100 μg protein was added to each MoNs (5 μg) coupled protein A+G beads. The IP samples were run 10% SDS-PAGE and transferred to Hybond-P membrane. The blot was probed with mouse ant-EBOV-GP1.





DESCRIPTION OF THE PREFERRED EMBODIMENTS

Unless defined otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which the invention belongs. Although any methods and materials similar or equivalent to those described herein can be used in the practice or testing of the present invention, the preferred methods and materials are now described. All publications mentioned hereunder are incorporated herein by reference.


Definitions

As used herein, “neutralizing antibody” refers to an antibody, for example, a monoclonal antibody, capable of disrupting a formed viral particle or inhibiting formation of a viral particle or prevention of binding to or infection of mammalian cells by a viral particle.


As used herein, “diagnostic antibody” or “detection antibody” or “detecting antibody” refers to an antibody, for example, a monoclonal antibody, capable of detecting the presence of an antigenic target within a sample. As will be appreciated by one of skill in the art, such diagnostic antibodies preferably have high specificity for their antigenic target.


As used herein, “humanized antibodies” refer to antibodies with reduced immunogenicity in humans.


As used herein, “chimeric antibodies” refer to antibodies with reduced immunogenicity in humans built by genetically linking a non-human Variable region to human constant domains.


Described herein are a number of Ebola and Marburg monoclonal antibodies. Specifically, antigens were developed using a live replicating vector vesicular stomatitis virus described in PCT Application PCT/CA03/001125.


The VSV based vaccine delivery system was used to develop monoclonal antibodies in mice.


Specifically, described herein are monoclonal antibodies 1H3, 2G4, 4G7, 5D2, 5E6, 7C9, 7G4 and 10C8. As discussed below, 1H3 comprises 1H3-heavy chain (SEQ ID No. 1) and 1H3-light chain (SEQ ID No. 2); 2G4 comprises 2G4-heavy chain (SEQ ID No. 3) and 2G4-light chain (SEQ ID No. 4); 4G7 comprises 4G7-heavy chain (SEQ ID No. 5) and 4G7-light chain (SEQ ID No. 6); 5D2 comprises 5D2-heavy chain (SEQ ID No. 7) and 5D2-light chain (SEQ ID No. 8); 5E6 comprises 5E6-heavy chain (SEQ ID No. 9) and 5E6-light chain (SEQ ID No. 10); 7C9 comprises 7C9-heavy chain (SEQ ID No. 11) and 7C9-light chain (SEQ ID No. 12); 7G4 comprises 7G4-heavy chain (SEQ ID No. 13) and 7G4-light chain (SEQ ID No. 14); and 10C8 comprises 10C8-light chain (SEQ ID No. 16) and 10C8-heavy chain (SEQ ID No. 15).


These antibodies also appear to have high affinity and avidity to Ebola glycoproteins, which means that they could be used as highly sensitive diagnostic tools.


For example, as shown in FIG. 1, mice infected with MA-ZEBOV and subsequently treated with the monoclonal antibodies described above showed increased survival compared to mice treated with PBS. Results are summarized in Tables 1 and 2.



FIGS. 2 and 3 show weight changes in guinea pigs treated with the monoclonal antibodies or mixtures thereof post infection. As can be seen, guinea pigs treated with the monoclonal antibodies showed consistent weight while those treated with PBS showed significant weight loss. Results are summarized in Table 3.


The nucleotide sequences of the heavy and light chains of 1H3, 2G4, 4G7, 5D2, 5E6, 7C9, 7G4 and 10C8 follow. As will be appreciated by one of skill in the art, the amino acid sequences of these antibodies can easily be deduced from the nucleotide sequences. Accordingly, in some embodiments, the invention is directed to amino acid sequences deduced from 1H3-light (SEQ ID. No. 2); 2G4-light (SEQ ID No. 4); 4G7-light (SEQ ID No. 6); 5D2-light (SEQ ID No. 8); 5E6-light (SEQ ID No. 10); 7C9-light (SEQ ID No. 12); 7G4-light (SEQ ID No. 14), 10C8-light(SEQ ID No. 16), 1H3-heavy (SEQ ID No. 1); 2G4-heavy (SEQ ID No. 4G7-heavy (SEQ ID No. 5); 5D2-heavy (SEQ ID No. 7), 5E6-heavy (SEQ ID No. 9), 7C9-heavy (SEQ ID No. 11), 7G4-heavy (SEQ ID No. 13) and 10C8-heavy (SEQ ID No. 15).









mAb 1H3 heavy chain sequence: 373 bp 


(SEQ ID No. 1)


TGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAG





CTTCTGGCTTCAACATTAAAGACACCTATATACATTGGGTGAAACAGGGC





GCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTA





ATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATCACAGCAGAC





ACATCCTCCAATACAGCCTACCTGCAGCTCAGCGGCCTGACATCTGAGGA





CACTGCCGTCTATTACTGTGCTAGGGAGTCGAGGATATCTACTATGCTTA





CGACGGGGTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCC





TCAGCCAAAACAACAGCCCCATCG





mAb 1H3 light chain sequence: 303 bp 


(SEQ ID No.2)


GCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGC





CAGCTCAAGTGTAAGTTACATGTACTGGTACCAGCAGAAGCCAGGATCCT





CCCCCAGACTCCTGATTTATGACACATCCAACCTGGCTTCTGGAGTCCCT





GTTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAG





CCGAATGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTGGAGTA





GTTACCCGTACACGTTCGGAGGGGGGACCAAGCTGGAAATAAAACGGGCT





GAT





mAb 2G4 heavy chain sequence: 364 bp 


(SEQ ID No. 3)


TGGAGGAGGCTTGATGCAACCTGGAGGATCCATGAAACTCTCCTGTGTTG





CCTCAGGATTCACTTTCAGTAACTACTGGATGAACTGGGTCCGCCAGTCT





CCAGAGAAGGGGCTTGAGTGGGTTGCTGAAATTAGATTGAAATCTAATAA





TTATGCAACACATTATGCGGAGTCTGTGAAAGGGAGGTTCACCATTTCAA





GAGATGATTCCAAAAGGAGTGTCTACCTGCAAATGAATACCTTAAGAGCT





GAAGACACTGGCATTTATTACTGTACCCGGGGGAATGGTAACTACAGGGC





TATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAA





CAACACCCCCATCA





mAb 2G4 light chain sequence: 306 bp 


(SEQ ID No. 4)


GCCTCCCTATCTGTATCTGTGGGAGAAACTGTCTCCATCACATGTCGAGC





AAGTGAGAATATTTACAGTAGTTTAGCATGGTATCAGCAGAAACAGGGAA





AATCTCCTCAGCTCCTGGTCTATTCTGCAACAATCTTAGCAGATGGTGTG





CCATCAAGGTTCAGTGGCAGTGGATCAGGCACTCAGTATTCCCTCAAGAT





CAACAGCCTGCAGTCTGAAGATTTTGGOACTTATTACTGTCAACATTTTT





GGGGTACTCCGTACACGTTCGGAGGGGGGACCAAGCTGGAAATAAAACGG





GCTGAT





mAb 4G7 heavy chain sequence: 358 bp 


(SEQ ID No. 5)


TGGACCTGAGCTGGAGATGCCTGGCGCTTCAGTGAAGATATCCTGCAAGG





CTTCTGGTTCCTCATTCACTGGCTTCAGTATGAACTGGGTGAAGCAGAGC





AATGGAAAGAGCCTTGAGTGGATTGGAAATATTGATACTTATTATGGTGG





TACTACCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTGGACA





AATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGGAC





TCTGCAGTCTATTACTGTGCAAGATCGGCCTACTACGGTAGTACTTTTGC





TTACTGGGGCCAAGGGACTCTGGTCACTSTCTCTGCAGCCAAAACAACAG





CCCCATCG





mAb 4G7 light chain sequence: 306 bp 


(SEQ ID No. 6)


GCCTCCCTATCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGC





AAGTGAGAATATTTACAGTTATTTAGCATGGTATCAGCAGAAACAGGGAA





AATCTCCTCAGCTCCTGGTCTATAATGCCAAAACCTTAATAGAGGGTGTG





CCATCAAGGTTCAGTGGCAGTGGATCAGGCACACAGTTTTCTCTGAAGAT





CAACAGCCTGCAGCCTGAAGATTTTGGGAGTTATTTCTGTCAACATCATT





TTGGTACTCCATTCACATTCGGCTCGGGGACAGAGTTGGAAATAAAACGG





GCTGAT





mAb 5D2 heavy chain sequence: 340 bp 


(SEQ ID No. 7)


GGGACCTGGCCTGGTGAGACCTTCTCAGTCTCTGTCCCTCACCTGCACTG





TCACTGGCTACTCAATCACCAGTGATTATGCCTGGAACTGGATCCGGCAG





TTTCCAGGAAACAAACTGGAGTGGCTGGGCTATATAACCAACACTGGTAG





CACTGGCTTCAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACA





CATCCAAGAACCAGTTCTTCCTGCAGTTGATTTCTGTGACTACTGAGGAC





ACAGCCACATATCACTGTGCAAGGGGCCTTGCYTACTGGGGCCAAGGGAC





TCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCG





mAb 5D2 light chain sequence: 321 bp 


(SEQ ID No. 8)


CTCACTTTGTCGGTTACCATTGGACAACCAGCCTCCATCTCTTGCAAGTC





AAGTCAGAGCCTCTTAGATAGTGATGGAAAGACATATCTGAATTGGTTGT





TACAGAGGCCAGGCCAGTCTCCAAAGCGCCTAATCTATCTGGTGTCTAAA





CTGGACTCTGGAGTCACTGACAGGTTCACTGGCAGTGGATCAGGGACAGA





TTTCACACTGAAAATCAGCAGAGTGGAGGCTGAGGATTIGGGAGTTTATT





ATTGTTGGCAAGGTACACACTCTCCATTCACGTTCGGCTCGGGGACAAAG





TTGGAAATAAAACGGGCTGAT





mAb 5E6 heavy chain sequence: 370 bp 


(SEQ ID No. 9)


TGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAG





CCTCTGGATCCGCTTTCAGTAGATATGACATGTCTTGGGTTCGCCAGACT





CCGGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTCGTGGTGGTGGTTT





CATCTACTATCCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACA





ATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGACGAC





ACAGCCATGTATTACTGTGCAAGACACGTTTACTACGGTAGTAGCCCGCT





CTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAG





CCAAAACAACAGCCCCATCG





mAb 5E6 light chain sequence: 324 bp 


(SEQ ID No. 10)


TCAGCCTCTTTGTCCCTGGGAGCCTCAGCAAAACTCACGTGCACCTTGAG





TAGTCAGCACAGTACGTTCACCATTGAATGGTATCAGCAACAGCCACTCA





AGCCTCCTAAGTATGTGATGGAGCTTAAGAAAGATGGAAGCCACAGTACA





GGTGATGGGATTCCTGATCGCTTCTCTGGATCCAGCTGGTGCTGATCGCT





ACCTTAGCATTTCCAACATCCAGCCTGAAGATGAAGCAATATACATCTGT





GGTGTGGGTGATACAATTAATGAACAATTTGTGTATGTTTTCGGCGGTGG





AACCAAGGTCACTGTCCTAGGT





mAb 7C9 heavy chain sequence: 358 bp 


(SEQ ID No. 11)


TGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAG





CTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGGAGAGG





CCTGACAAGGGCCTGGAGTGGATTGGAAGGATTGATCCAGCGAATGGTAA





TACTAAATGTGACTCGAGGTTTCAGGGCAAGGCCACTATAACAGCAGACA





CATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGAC





ACTGCCGTCTATTACTGTGCTAGAAGGATCTACTTTGGTAAGGGCTTTGA





CTTTTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAG





CCCCATCG





mAb 7C9 light chain sequence: 324 bp 


(SEQ ID No. 12) 


TCCTCCCTGAGTGTGTCAGCAGGAGAGAAGGTCACTATGAGCTGCAAGTC





CAGTCAGAGTCTGTTTAACAGTGGAGATCAAAAGAACTACTTGGCCTGGT





ACCAGCAGAAACCAGGGCAGCCTCCTAAACTGTTGATCTACGGGGCATCC





ACTAGGGAATCTGGGGTCCCTGATCGCTTCACAGGCAGTGGATCTGGAAC





CGATTTCACTCTTACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTT





ATTACTGTCAGAATGATCAATTTTATCCTCCCACGTTCGGTGATGGGACC





AAGCTGGACCTGAAACGGGCTGAT





mAb 7G4 heavy chain sequence: 367 bp 


(SEQ ID No. 13)


TGGAGGGGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAA





CTTCTGGCTTCACCTTTACTGATCACTACATGGGCTGGGTCCGCCAGCCT





CCAGGAAAGGCACTTGAGTGGTTGGCTTTTGTTAGATACAAAGCTAAGGG





TTACACAACAGAGTACACTGCATCTGTGAAGGGTCGGTTCACCATCTCCA





GAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAACT





GAGGACAGTGCCACTTATTACTGTGCAAGAGATAGAGGGGGTTACGTGGG





AGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCA





AAACGACACCCCCATCT





mAb 7G4 light chain sequence 321 bp 


(SEQ ID No. 14)


CTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGATC





TAGTCAGAGCCTTGTACACAGGAATGGAAACACCTATTTCCATTGGTACC





TGCAGAAGCCAGGCCAGTCTCGACTCCTGATCTACAAAGTTTCCAACCGA





TTTTCTGGGGTCCCAGACAGGTTCAGTGGCAGTGGATCAGGGACAGATTT





CACACTCAAGATCAGCAGAGTGGAGGCTGAGGATCTGGGAGTTTATTTCT





GCTCTCAAAGTACACATGTTCCGTACACTTTCGGAGGGGGGACCAAGCTG





GAAATAAAACGGGCTGAT





mAb 10C8 heavy chain sequence: 352 bp 


(SEQ ID No. 15)


TGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAAGTTGTCCTGCACAT





CTTCTGGCTTCAACATTAAAGACTACTTTCTACACTGGGTGAAACAGAGG





CCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGA





TACTGAATATGCCCCGAAGTTCCAGGACAAGGCCACTATGACTGCAGACA





CATCCTCCAACACAGCCTACCTGCACCTCAGCAGCCTGACATCTGAGGAC





ACTGGCGTCTATTACTGTAATGCAGATGGTAACTACGGGAAGAACTACTG





GGGCCAAGGCACCACTCTCACCGTCTCCTCAGCCAAAACAACAGCCCCAT





CG





mAb 10C8 light chain sequence: 324 bp 


(SEQ ID No. 16)


CTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGATC





TAGTCAGAGCCTTGTACACAGTAATGGAAACACCTTTTTACATTGGTACC





TGCAGAAGCCAGGCCAGTCTCCAAAGCTCCTGATCTACAGAGTTTCCAAC





CGATTTTCTGGGGTCCCAGACAGGTTCAGTGGCAGTGGATCAGGGACAGA





TTTCACACTCAAGATCAGCAGAGTGGAGGCTGAGGATCTGGGAGTTTATT





TCTGCTCTCAAAGTACACATGTTCCTCCGTACACGTTCGGAGGGGGGACC





AAGCTGGAAATAAAACGGGCTGAT






In another embodiment of the invention, one or more of the nucleic acid sequences described above encoding the antibody are subjected to humanization techniques or converted into chimeric human molecules for generating a variant antibody which has reduced immunogenicity in humans. Humanization techniques are well known in the art—see for example U.S. Pat. No. 6,309,636 and U.S. Pat. No. 6,407,213 which arm incorporated herein by reference specifically for their disclosure on humanization techniques. Chimerics are also well known, see for example U.S. Pat. No. 6,461,824, U.S. Pat. No. 6,204,023, U.S. Pat. No. 6,020,153 and U.S. Pat. No. 6,120,767 which are similarly incorporated herein by reference.


In one embodiment of the invention, chimeric antibodies are prepared by preparing an expression vector which comprises a nucleic acid encoding a constant region domain of a human light or heavy chain genetically linked to a nucleic acid encoding a light chain variable region selected from the group consisting of 1H3-light (SEQ ID No. 2); 2G4-light (SEQ ID No. 4); 4G7-light (SEQ ID No. 6); 5D2-light (SEQ ID No. 8): 5E6-light (SEQ ID No. 10); 7C9-light (SEQ ID No. 12); 7G4-light (SEQ ID No. 14) and 10C8-light(SEQ ID No. 16) or a heavy chain variable region selected from the group consisting of 1H3-heavy (SEQ ID No. 1); 2G4-heavy (SEQ ID No. 3); 4G7-heavy (SEQ ID No. 5); 5D2-heavy (SEQ ID No. 7). 5E6-heavy (SEQ ID No. 9), 7C9-heavy (SEQ ID No. 11), 7G4-heavy (SEQ ID No. 13) and 10G8-heavy (SEQ ID No. 15). It is of note that all of these sequences are described above.


In another embodiment of the invention, there are provided recombinant antibodies comprising at least one modified variable region, said region selected from the group consisting of 1H3-light (SEQ ID No. 2); 2G4-light (SEQ ID No. 4); 4G7-light (SEQ ID No. 6); 5D2-light (SEQ ID No. 8); 5E6-light (SEQ ID No. 10); 7C9-light (SEQ ID No. 12); 7G4-light (SEQ ID No. 14), 10C8-light(SEQ ID No. 16), 1H3-heavy (SEQ ID No. 1); 2G4-heavy (SEQ ID No. 3); 4G7-heavy (SEQ ID No. 5); 5D2-heavy (SEQ ID No. 7), 5E6-heavy (SEQ ID No. 9), 7C9-heavy (SEQ ID No. 11), 7G4-heavy (SEQ ID No. 13) and 10C8-heavy (SEQ ID No. 1), in which at least one but fewer than about 30 of the amino acid residues of said variable region has been changed or deleted without disrupting antigen binding. It is of note that all of these sequences are described above.


In yet other embodiments, immunoreactive fragments of any of the above-described monoclonal antibodies, chimeric antibodies or humanized antibodies are prepared using means known in the art, for example, by preparing nested deletions using enzymatic degradation or convenient restriction enzymes.


It is of note that in all embodiments describing preparation of humanized antibodies, chimeric antibodies or immunoreactive fragments of monoclonal antibodies, these antibodies are screened to ensure that antigen binding has not been disrupted. This may be accomplished by any of a variety of means known in the art, but one convenient method would involve use of a phage display library. As will be appreciated by one of skill in the art, as used herein, ‘immunoreactive fragment’ refers in this context to an antibody fragment reduced in length compared to the wild-type or parent antibody which retains an acceptable degree or percentage of binding activity to the target antigen. As will be appreciated by one of skill in the art, what is an acceptable degree will depend on the intended use.


It is of note hat as discussed herein, any of the above-described antibody or humanized variant thereof may be formulated into a pharmaceutical treatment for providing passive immunity for individuals suspected of or at risk of developing hemorrhagic fever comprising a therapeutically effective amount of said antibody. The pharmaceutical preparation may include a suitable excipient or carrier. See, for example, Remington: The Science and Practice of Pharmacy, 1995, Gennaro ed. As will be apparent to one knowledgeable in the art, the total dosage will vary according to the weight, health and circumstances of the individual as well as the efficacy of the antibody.


While the preferred embodiments of the invention have been described above, it will be recognized and understood that various modifications may be made therein, and the appended claims are intended to cover all such modifications which may fall within the spirit and scope of the invention.









TABLE 1







Dose-dependent protective efficacy of McAbs in mice











Dose
Meantime to



Treatmenta
(μg/treatment)
deathb
No. of survivors/total













McAb 4G7
100
7.00 (n = 1)
5/6



50
7.00 (n = 1)
5/6



25
6.00 (n = 3)
3/6



12.5
6.80 (n = 5)
1/6



6.25
8.20 (n = 5)
2/6


McAb 5D2
100
N/Ac
6/6



50
N/Ac
6/6



25
N/Ac
6/6



12.5
N/Ac
6/6



6.25
7.50 (n = 2)
4/6


McAb 5E6
100
N/Ac
6/6



50
N/Ac
6/6



25
N/Ac
6/6



12.5
6.50 (n = 2)
4/6



6.25
6.67 (n = 3)
3/6


McAb 7C9
100
N/Ac
6/6



50
N/Ac
6/6



25
7.00 (n = 1)
5/6



12.5
7.00 (n = 1)
5/6



6.25
6.50 (n = 4)
2/6


McAb 7G4
100
N/Ac
6/6



50
7.50 (n = 1)
4/6



25
7.00 (n = 1)
5/6



12.5
7.60 (n = 5)
1/6



6.25
6.60 (n = 5)
1/6


McAb 10C8
100
7.00 (n = 1)
5/6



50
7.00 (n = 1)
5/6



25
7.50 (n = 4)
2/6



12.5
7.00 (n = 5)
1/6



6.25
6.40 (n = 5)
1/6


PBS

5.80 (n = 5)
0/5






aMice were intraperitoneally treated with antibodies 1 day after challenge with 1000 LD50 of the mouse-adapted Ebola virus.




bData for animals that died (numbers of animals are shown in parentheses).




cN/A: not applicable.














TABLE 2







Time dependency of the protective efficacy of MAbs in mice










MAbs
Day of treatmenta
Mean time to deathb
No. of survivors/total













1H3
−4
6.70 ± 0.61 (n = 10)
0/10


100 μg
−1
6.60 ± 0.61 (n = 10)
0/15



+1
8.10 ± 0.74 (n = 9)
6/15



+2
6.60 ± 0.80 (n = 5)
5/10



+3
6.40 ± 0.97 (n = 10)
0/10


2G4
−4
7.40 ± 0.63 (n = 10)
0/10


100 μg
−1
7.86 ± 0.74 (n = 14)
1/15



+1
8.00 (n = 6)
9/15



+2
7.30 ± 0.47 (n = 3)
7/10



+3
5.70 ± 1.13 (n = 10)
0/10


4G7
−4
7.42 ± 0.46 (n = 7)
3/10


100 μg
−1
7.08 ± 0.74 (n = 14)
1/15



+1
8.25 ± 0.43 (n = 4)
11/15 



+2
n/ac
10/10 



+3
5.67 ± 1.34 (n = 9)
1/10


5D2
−4
7.00 (n = 1)
9/10


100 μg
−1
8.00 ± 1.00 (n = 2)
13/15 



+1
n/a
15/15 



+2
7.00 (n = 4)
6/10



+3
6.30 ± 1.05 (n = 10)
0/10


5E6
−4
7.00 (n = 2)
8/10


100 μg
−1
8.25 ± 0.43 (n = 4)
11/15 



+1
7.00 (n = 1)
14/15 



+2
6.00 (n = 1)
9/10



+3
5.80 ± 1.03 (n = 10)
0/10


7C9
−4
7.00 (n = 1)
9/10


100 μg
−1
7.75 ± 0.43 (n = 4)
11/15 



+1
8.00 ± 0.82 (n = 3)
12/15 



+2
7.00 (n = 1)
9/10



+3
6.10 ± 0.67 (n = 10)
0/10


7G4
−4
8.20 ± 0.71 (n = 10)
0/10


100 μg
−1
8.07 ± 0.59 (n = 14)
1/15



+1
n/a
15/15 



+2
7.10 ± 0.57 (n = 9)
1/10



+3
6.70 ± 0.44 (n = 10)
0/10


10C8
−4
7.83 ± 0.64 (n = 6)
4/10


100 μg
−1
7.64 ± 1.17 (n = 14)
1/15



+1
8.50 ± 0.50 (n = 2)
13/15 



+2
6.83 ± 0.37 (n = 6)
4/10



+3
6.30 ± 1.13 (n = 10)
0/10


17F8d
−4
6.00 ± 1.10 (n = 9)
1/10


100 μg
−1
6.13 ± 0.88 (n = 15)
0/15



+1
7.21 ± 0.86 (n = 14)
1/15



+2
6.10 ± 0.83 (n = 10)
0/10



+3
6.00 ± 1.13 (n = 10)
0/10


PBS
−4
5.40 ± 1.43 (n = 10)
0/10



−1
6.60 ± 0.80 (n = 5)
0/5 



+3
5.00 ± 0.60 (n = 10)
0/10






aMice were intraperitoneally treated with each MAb at indicated time before or after challenge with 1000 LD50 of the mouse-adapted Ebola virus.




bData for animals that died (numbers of animals are shown in parentheses).




cN/A: not applicable.




dControl Mab: anti-MAR GP.














TABLE 3







Protective efficacy of MAbs in guinea pigs











Day of
Meantime
No.


Treatment
treatmenta
to deathb
of survival/Tatalc





Cocktail of





5D2(3 mg) +
1
N/Ad
6/6


4G7(2 mg) + 1H3(1 mg) +
2




2GA(1 mg)





Cocktail of





5E6(3 mg) +
1
N/A
6/6


4G7(2 mg) + 1H3(1 mg) +
2




2G4(1 mg)





Cocktail of





7C9(3 mg) +
1
N/A
6/6


4G7(2 mg) + 1H3(1 mg) +
2




2G4(1 mg)





Cocktail of





7G4(3 mg) +
1
N/A
6/6


4G7(2 mg) + 1H3(1 mg) +
2




2G4(1 mg)





Cocktail of





10C8(3 mg) +
1
9.00 (n = 1)
5/6


4G7(2 mg) + 1H3(1 mg) +
2




2G4(1 mg)





Cocktail of





PBS +
1
7.00 (n = 6)
0/6


PBS
2






aGuinea pigs were intraperiotoneally treated with the MAbs as showed dose in the table on the indicated days after challenge with 1000 LD50 of the guinea pig-adapted Ebola virus.




bData for all animals that died(numbers of animals are shown in parentheses).




cSurvival rate on day 28 after challenge.




dN/A: not applicable.














TABLE 4







Summary of ELISA Result of Anti-Ebola-GP McAbs









Antigen



















Rf-GP1
Mucin






eGP1,2
sGP
sub-f-D
domain
GP1


McAb
Isotype
eVLPs
ΔTm
1-295aa
157-369aa
333-458aa
1-501aa





1H3
IgG2a, κ
+
+
+


+


2G4
IgG2b, κ
+
+






4G7
IgG2a, κ
+
+



+


5D2
IgG2a, κ
+
+

+
+
+


5E6
IgG2a, λ
+
+


+
+


7C9
IgG2a, κ
+
+

+/−
+
+


7G4
IgG1, κ
+
+


+/−
+


10C8
IgG2a, κ
+
+


+/−
+





Antigens (0.3 μg/well) were coated in 96 well microtitre plate then blocking with 2% skim milk. Serial dilutions of each MAb were applied to the plate followed by HRP-conjugated goat anti-mouse IgG. After incubabing with substrate, the asorbance awas read at OD405. Cut off was 2X background.













TABLE 5







Prolonged survival seen in McAb-treated Guinea pigs











Treatmenta
Mean time to deathb
Student's t-test






MAb 1H3
11.7 ± 2.18 (n = 5)
p = 0.0181



MAb 2G4
11.5 ± 1.50 (n = 2)
N/Ac



MAb 4G7
10.5 ± 1.50 (n = 2)
N/Ac



MAb 5D2
 9.4 ± 1.02 (n = 5)
p = 0.0244



MAb 5E6
10.8 ± 1.47 (n = 5)
p = 0.0092



MAb 7C9
 9.6 ± 0.80 (n = 5)
p = 0.0056



MAb 7G4
 9.6 ± 0.80 (n = 5)
p = 0.0056



MAb 10C8
 9.4 ± 1.20 (n = 5)
p = 0.0428



PBS
7.67 ± 0.75 (n = 6)
N/Ac






aGuinea pigs were intraperiotoneally treated with 5 mg of the MAb as showed in the table on day 1 after challenge with 1000 LD50 of the guinea pig-adapted Ebola virus.




bData for all animals that died (numbers of animals are shown in parentheses).




cN/A: not applicable.














TABLE 6







Protective efficacy of MAbs in guinea pigs













No.



Day of

of survival/


Treatment
treatmenta
Meantime to deathb
Tatalc





Cocktail of 4G7(2 mg) +
−1
11.17 ± 3.09 (n = 3)
3/6


1H3(1.5 mg) +





2G4(1.5 mg)





Cocktail of 4G7(2 mg) +
+1
 7.92 ± 0.42 (n = 3)
3/6


1H3(1.5 mg) +





2G4(1.5 mg)





Cocktail of 4G7(2 mg) +
+2
N/Ad
6/6


1H3(1.5 mg) +





2G4(1.5 mg)





Cocktail of 4G7(2 mg) +
+3
11.17 ± 3.09 (n = 3)
4/6


1H3(1.5 mg) +





2G4(1.5 mg)





PBS
+2
 6.58 ± 0.59 (n = 6)
3/6






aGuinea pigs were intraperiotoneally treated with the MAbs as showed dose in the table on the indicated days before or after challenge with 1000 LD50 of the guinea pig-adapted Ebola virus.




bData for all animals that died(numbers of animals are shown in parentheses).




cSurvival rate on day 28 after challenge.




dN/A: not applicable.














TABLE 7







Epitopes bound by ZEbov GP MoAbs 











Ebota GPs 
epitope
epitope


mAb name
with epitope
sequence
position 





IH3(IgG2a/κ):
sGPa 
SNTTGKLIWKVNPEI 
267-280 aa 





2G4(IgG2b/κ):
GP2a
REAIVNAQPKCNPNL 
502-516 aa 





4G7(IgG2a/κ):
GP2a
REAIVNAQPKCNPNL 
502-516 aa 





5D2(IgG2a/κ):
GP1b,c,d
DPGTNTTTEDHKIMA  
329-343 aa





5E6(IgG2a/κ):
GP1b,c,d
ATQVEQHHRRTDNDS  
401-415 aa





7C9(IgG2a/λ):
GP1b,c
unknown 
unknown





7G4(IgG1, κ): 
GP1b,c
unknown 
unknown





10C8(IgG2a, κ):
GP1b,c
unknown 
unknown






adetermined by using recombinant vesicular stamatitis virus(VSV) containing ZEbov GP gene to identify the amino acid changes in antigenic variants that escape antibody neutralization;




bdetermined by Western blot reactivity with Ebola Zaire 1976 or VLPs,




cdetermined by ELISA using recombinant GP1 protein;




ddetermined by ELISA using peptide library.






Claims
  • 1-4. (canceled)
  • 5. A pharmaceutical composition for the treatment of Ebola, the pharmaceutical composition comprising at least a first monoclonal antibody and a second monoclonal antibody, wherein the first monoclonal antibody is selected from a group consisting of: (a) a monoclonal antibody or antigen binding fragment thereof comprising a light chain variable region comprising the amino acid sequence deduced from the nucleic acid molecule as set forth in SEQ ID NO: 2, or variants thereof whereby at least one but fewer than 30 of the amino acid residues of said light chain variable region have been changed or deleted; and a heavy chain variable region comprising the amino acid sequence deduced from the nucleic acid molecule as set forth in SEQ ID No: 1, or variants thereof whereby at least one but fewer than 30 of the amino acid residues of said heavy chain variable region have been changed or deleted;(b) a monoclonal antibody or antigen binding fragment thereof comprising a light chain variable region comprising the amino acid sequence deduced from the nucleic acid molecule as set forth in SEQ ID NO: 4, or variants thereof whereby at least one but fewer than 30 of the amino acid residues of said light chain variable region have been changed or deleted; and a heavy chain variable region comprising the amino acid sequence deduced from the nucleic acid molecule as set forth in SEQ ID No: 3, or variants thereof whereby at least one but fewer than 30 of the amino acid residues of said heavy chain variable region have been changed or delete& and(c) a monoclonal antibody or antigen binding fragment thereof comprising a light chain variable region comprising the amino acid sequence deduced from the nucleic acid molecule as set forth in SEQ ID NO:6, or variants thereof whereby at least one but fewer than 30 of the amino acid residues of said light chain variable region have been changed or deleted; and a heavy chain variable region comprising the amino acid sequence deduced from the nucleic acid molecule as set forth in SEQ ID No: 5, or variants thereof whereby at least one but fewer than 30 of the amino acid residues of said heavy chain variable region have been changed or deleted.
  • 6. The pharmaceutical composition of claim 5, further comprising a pharmaceutically acceptable excipient or carrier.
  • 7. A method of treating a patient suspected of having hemorrhagic fever or at risk of developing hemorrhagic fever, the method comprising: i) identifying such a patientii) administering a therapeutically effective amount of a pharmaceutical composition comprising at least a first monoclonal antibody and a second monoclonal antibody, wherein the first monoclonal antibody is selected from a group consisting of:(a) a monoclonal antibody or antigen binding fragment thereof comprising a light chain variable region comprising the amino acid sequence deduced from the nucleic acid molecule as set forth in SEQ ID NO: 2, or variants thereof whereby at least one but fewer than 30 of the amino acid residues of said light chain variable region have been changed or deleted and a heavy chain variable region comprising the amino acid sequence deduced from the nucleic acid molecule as set forth in SEQ ID No: 1, or variants thereof whereby at least one but fewer than 30 of the amino acid residues of said heavy chain variable region have been changed or deleted;(b) a monoclonal antibody or antigen binding fragment thereof comprising a light chain variable region comprising the amino acid sequence deduced from the nucleic acid molecule as set forth in SEQ ID NO: 4, or variants thereof whereby at least one but fewer than 30 of the amino acid residues of said light chain variable region have been changed or deleted and a heavy chain variable region comprising the amino acid sequence deduced from the nucleic acid molecule as set forth in SEQ ID No: 3, or variants thereof whereby at least one but fewer than 30 of the amino acid residues of said heavy chain variable region have been changed or deleted; and(c) a monoclonal antibody or antigen binding fragment thereof comprising a light chain variable region comprising the amino acid sequence deduced from the nucleic acid molecule as set forth in SEQ ID NO: 6, or variants thereof whereby at least one but fewer than 30 of the amino acid residues of said light chain variable region have been changed or deleted and a heavy chain variable region comprising the amino acid sequence deduced from the nucleic acid molecule as set forth in SEQ ID No: 5, or variants thereof whereby at least one but fewer than 30 of the amino acid residues of said heavy chain variable region have been changed or deleted.
  • 8. The method of claim 7, wherein the pharmaceutical composition further comprises a pharmaceutically acceptable excipient or carrier.
Priority Claims (1)
Number Date Country Kind
PCT/CA2009/000070 Jan 2009 CA national
PRIOR APPLICATION INFORMATION

The instant application is a continuation application of U.S. patent application Ser. No. 14/979,834 filed Dec. 28, 2015, itself a continuation application of U.S. patent application Ser. No. 13/940,712, filed Jul. 12, 2013, which was a divisional application of U.S. Ser. No. 12/864,584, filed Oct. 26, 2010, which was a 371 of PCT Application CA2009/000070, filed Jan. 27, 2009, which claims the benefit of US Provisional Patent Application 61/025,491, filed Feb. 1, 2008.

Provisional Applications (1)
Number Date Country
61025491 Feb 2008 US
Divisions (1)
Number Date Country
Parent 12864584 Oct 2010 US
Child 13940712 US
Continuations (2)
Number Date Country
Parent 14979834 Dec 2015 US
Child 15826537 US
Parent 13940712 Jul 2013 US
Child 14979834 US