Commonly owned and assigned co-pending application U.S. Ser. No. 61/257058 (filed concurrently herewith) entitled “MULTI-GRATING BIOSENSOR FOR LABEL-INDEPENDENT OPTICAL READERS”.
The present disclosure relates to label-independent optical readers, and in particular relates to multi-wavelength microplates for such readers.
Label-independent (LID) optical readers are used, for example, to detect a drug binding to a target molecule such as a protein. Certain types of LID optical readers measure changes in refractive index on the surface of a resonant waveguide grating (RWG) biosensor for an array of RWG biosensors. The individual RWG biosensors are located in respective wells of a microplate. Broadband light from a broadband light source is directed to each RWG biosensor. Only light whose wavelength is resonant with the RWG biosensor is strongly reflected. This reflected light is collected and spectrally analyzed to determine the resonant wavelength, which is representative of a refractive index change and thus biomolecular binding to the RWG biosensor.
Spurious changes to the refractive index of the RWG biosensor and other system effects can reduce the accuracy of the resonant wavelength measurement.
Consequently, a reference microplate can be used with standardized RWGs that produce a resonant wavelength within the optical readers' operating spectral bandwidth λFWHM, which is typically approximately 824 nm to 844 nm. However, broadband light sources can have variations (noise) that are not detected by present-day reference microplates.
An aspect of the disclosure is a multi-wavelength reference microplate for a LID optical reader having a light source with a wavelength band. The microplate includes a support plate that supports a plurality of reference wells. At least one of the reference wells is configured as a multi-wavelength reference well having disposed therein two or more RWG sections that respectively reflect two or more different reference resonant wavelengths within the light source wavelength band.
Another aspect of the disclosure is a multi-wavelength reference microplate for a LID optical reader having a light source with a wavelength band. The microplate includes a support plate that operably supports a plurality of multi-wavelength reference wells each having a RWG biosensor disposed therein that includes two or more RWG sections that respectively have two or more reference resonant wavelengths. The microplate also includes a fill material that at least partially fills each multi-wavelength reference well, with the fill material having a refractive index similar to that of water, such as of about 1.3, within the light source wavelength band.
Another aspect of the disclosure is a method of using a reference microplate with reference wells to measure multiple reference resonant wavelengths in a LID optical reader system. The method includes providing in at least one reference well two or more RWG sections each having a different reference resonant wavelength. The method also includes irradiating each of the two or more RWG sections to generate respective reflected light therefrom. The method further includes spectrally analyzing the respective reflected light to measure the two or more reference resonant wavelengths.
These and other aspects of the disclosure will be described by reference to the following written specification, claims and appended drawings.
A more complete understanding of the present disclosure may be had by reference to the following detailed description when taken in conjunction with the accompanying drawings, wherein:
Reference is now made to embodiments of the disclosure, exemplary embodiments of which are illustrated in the accompanying drawings.
Microplate 170 of
An exemplary RWG biosensor array 102A has a 4.5 mm pitch for RWG biosensors 102 that are 2 mm square, and includes 16 RWG biosensors per column and 24 RWG biosensors in each row. In embodiments, fiducials 428 can be used to position, align, or both, the microplate 170 in system 100. A microplate holder 174 is also shown holding microplate 170. Many different types of plate holders can be used as microplate holder 174. Here again, microplate 170 can be the actual sample microplate 170S or a reference microplate 170R used to calibrate or troubleshoot system 100.
With reference again to
Incident optical beam 134I reflects from RWG biosensor 102, thereby forming a reflected optical beam 134R. Reflected optical beam 134R is received by optical system 130 and light 136 therefrom (hereinafter, “guided light signal”) is directed by coupling device 126 to a spectrometer unit 140, which generates an electrical signal S140 representative of the spectra of the reflected optical beam. In embodiments, a controller 150 having a processor unit (“processor”) 152 and a memory unit (“memory”) 154 then receives electrical signal S140 and stores in the memory the raw spectral data, which is a function of a position (and possibly time) on RWG biosensor 102. Thereafter, processor 152 analyzes the raw spectral data based on instructions stored therein or in memory 152.
The result is a spatial map of resonant wavelength (λR) data such as shown in
Example RWG biosensors 102 make use of changes in the refractive index at sensor surface 103 that affect the waveguide coupling properties of incident optical beam 134I and reflected optical beam 134R to enable label-free detection of biological substance 104 (e.g., cell, molecule, protein, drug, chemical compound, nucleic acid, peptide, carbohydrate) on the RWG biosensor. Biological substance 104 may be located within a bulk fluid deposited on RWG biosensor surface 103, and the presence of this biological substance alters the index of refraction at the RWG biosensor surface.
To detect biological substance 104, RWG biosensor 102 is probed with incident optical beam 134I, and reflected optical beam 134R is received at spectrometer unit 140. Controller 150 is configured (e.g., processor 152 is programmed) to determine if there are any changes (e.g., 1 part per million) in the RWG biosensor refractive index caused by the presence of biological substance 104. In embodiments, RWG biosensor surface 103 can be coated with, for example, biochemical compounds (not shown) that only allow surface attachment of specific complementary biological substances 104, thereby enabling RWG biosensor 102 to be both highly sensitive and highly specific. In this way, system 100 and RWG biosensor 102 can be used to detect a wide variety of biological substances 104. Likewise, RWG biosensor 102 can be used to detect the movements or changes in cells immobilized to RWG biosensor surface 103, for example, when the cells move relative to the RWG biosensor or when they incorporate or eject material, a refractive index change occurs.
If multiple RWG biosensors 102 are operably supported as an array 102A, then they can be used to enable high-throughput drug or chemical screening studies. For a more detailed discussion about the detection of a biological substance 104 (or a biomolecular binding event) using scanning optical reader systems, reference is made to U.S. patent application Ser. No. 11/027,547. Other optical reader systems are described in U.S. Pat. No. 7,424,187 and U.S. Patent Application Publications No. 2006/0205058 and 2007/0202543.
The most commonly used technique for measuring biochemical or cell assay events occurring on RWG biosensors 102 is spectral interrogation. Spectral interrogation entails illuminating RWG biosensor 102 with a multi-wavelength or broadband beam of light (incident optical beam 134I), collecting the reflected light (reflected optical beam 134R), and analyzing the reflected spectrum with spectrometer unit 140. An exemplary reflection spectrum from an example spectrometer unit 140 is shown in
As discussed above, in an example of system 100, light source 106 employs a broadband light source such as an SLD.
If fringes 202 shift over time, the power level of the waveguide resonant wavelength is altered and the resulting signal resonant wavelength λRS reported by the LID detection system shifts.
Consequently, reference microplate 170R of the present disclosure is a “multi-wavelength reference microplate” configured to verify the stability of an SLD-based light source 106. Multi-wavelength reference microplate 170R has at least one and preferably multiple multi-wavelength reference wells 175R that each provide multiple reflected wavelengths in a manner that approximates the sample microplate 170S, that matches one half the fringe period of the SLD light source, or both. Multi-wavelength reference microplate 170R provides the capability to sample multiple wavelengths within the operating wavelength spectral bandwidth λFWHM of light source 106 to more accurately measure or otherwise characterize the optical reader system's noise performance. In embodiments, all of the reference wells 175R of multi-wavelength microplate 170R are multi-wavelength reference wells, while in other embodiments, the multi-wavelength microplate includes one or more but not all multi-wavelength reference wells.
In embodiments, RWG sections Sn are formed separately to have different grating periods and thus different reference resonant wavelengths λRRn. The separate RWG sections Sn are then disposed on an upper surface 212 of a support substrate 210, as illustrated in
Then, with reference to
Then, with reference to
Note that the grating period P0 is on the order of hundreds of nanometers while the thickness increases due to the coatings are on the order of 5 nm to 10 nm. The period P0 does not change due to addition of the coatings, thought there is a slight changed in the duty cycle, which has a negligible effect on the performance of the multi-segment reference RWG biosensor 102R.
In embodiments, layers 261, 262, and 263 can be applied using known selective mask-based deposition techniques. In embodiments, coatings 261, 262, and 263 can comprise niobia.
Since the sample microplate 170S will have its sample wells 175S filled with water, multi-wavelength reference wells 175R must also be filled with either water or a material that mimics water by having substantially the same refractive index (e.g., of about 1.3) within light source spectral bandwidth λFWHM. The use of distilled water to fill multi-wavelength reference wells 175R is an option, though it is generally not preferred because water may cause RWG biosensors to degrade (e.g., delaminate) over time. Distilled water also evaporates, and can spill out of the reference wells 175R if reference microplate 170R is not carefully handled or the wells not sealed.
With reference to
An example elastomer fill material 310 suitable for use in filling multi-wavelength reference wells 175R is sold under the brand name of Sylgard-184® elastomer, available from the Dow Corning Corporation, Midland, Mich. The Sylgard-184® elastomer has the following properties/characteristics as provided in Table 1:
It is noted here that any fill material 310 that is known or is subsequently developed that has properties and characteristics substantially the same as that of the Sylgard-184™ elastomer is or will be suitable for use in the present disclosure.
Fill material 310 is added to interior 306 of multi-wavelength reference wells 175R either manually using a positive displacement pipette or by an automated filling process. Multi-wavelength reference microplate 170R is then allowed to cure for approximately two days at room temperature, after which time the elastomer fill material 310 within the multi-wavelength reference wells 175R has fully cured and is ready for use.
Consider by way of example a multi-wavelength reference microplate 170R having three different multi-wavelength reference well sets 350-1, 350-2 and 350-3. The first set 350-1 includes multi-wavelength reference wells 175R1 having multi-segment reference RWG biosensors 102R with two sections S1 and S2 configured to reflect reference wavelengths λRR1A=825 nm and λRR2A=830 nm (see inset A). The second set 350-2 includes multi-wavelength reference wells 175R2 having multi-segment reference RWG gratings 102R again with two sections S1 and S2 configured to reflect reference wavelengths λRR2A=834.5 nm and λRR2B=837 nm (see inset B). The third set 350-3 includes multi-wavelength reference wells 175R3 having multi-segment reference RWG gratings 102R with three sections S1, S2 and S3 configured to reflect reference wavelengths λRR3A=840 nm, λRR3B=842 nm and λRR3C=844 nm (see inset C).
The result is a multi-wavelength reference microplate 170R that provides wavelength information at multiple wavelengths within the broadband light source spectral bandwidth λFWHM.
Multi-wavelength reference microplates 170R can be employed by end-users to ensure system performance prior to running an assay, or use them as a reader control during an assay. The multi-wavelength reference microplates 170R provide a more realistic simulation of the customer assay then the prior art reference microplates. It is also noted that multi-wavelength reference plates 170R simplify field support efforts by providing multi-wavelength (and up to full spectrum) verification of the optical reader system in a single reference microplate. Currently, field support personnel must carry multiple microplates and additional metrology equipment (notch filters, etc) if they need to fully evaluate the optical reader's optical spectrum.
It will be apparent to those skilled in the art that various modifications to the preferred embodiment of the disclosure as described herein can be made without departing from the scope of the disclosure as defined in the appended claims. Thus, the disclosure covers the modifications and variations provided they come within the scope of the appended claims and the equivalents thereto.
This application is a non-provisional application and claims the benefit of U.S. Provisional Application Ser. No. 61/257,061, filed on Nov. 2, 2009. The content of this document and the entire disclosure of any publication or patent document mentioned herein are incorporated by reference.
Number | Date | Country | |
---|---|---|---|
61257061 | Nov 2009 | US |