New instrument and methods for fast, diagnostic-quality histology of un-embedded bone marrow and lymph node specimens

Information

  • Research Project
  • 9677952
  • ApplicationId
    9677952
  • Core Project Number
    R43CA235890
  • Full Project Number
    1R43CA235890-01
  • Serial Number
    235890
  • FOA Number
    PA-18-574
  • Sub Project Id
  • Project Start Date
    2/1/2019 - 6 years ago
  • Project End Date
    1/31/2020 - 5 years ago
  • Program Officer Name
    ZHAO, MING
  • Budget Start Date
    2/1/2019 - 6 years ago
  • Budget End Date
    1/31/2020 - 5 years ago
  • Fiscal Year
    2019
  • Support Year
    01
  • Suffix
  • Award Notice Date
    1/17/2019 - 6 years ago

New instrument and methods for fast, diagnostic-quality histology of un-embedded bone marrow and lymph node specimens

Project Summary Over 600,000 bone marrow biopsies are performed every year in the United States, while hundreds of thousands more lymph node biospies are performed. Histological evaluation of these biopsies is a critical component of care for hematologic diseases including leukemia, lymphoma, myelodysplastic syndrome, myeloproliferative disease and non-neoplastic conditions such as viral infections and autoimmune conditions. We have developed a platform that we consider a paradigm shift in the histologic examination of tissues. It is based on a new chemical process, imaging, and image processing approach that we have dubbed Clearing Histology with MultiPhoton microscopy (CHiMP).The CHiMP technology enables visual analysis of entire intact, un-embedded and uncut specimens within a short time-frame and with a resolution that is amenable to primary diagnosis. The significant clinical benefits include: 1) potential for same-day diagnosis, 2) labor and cost savings, 3) access to 3D perspective, 4) increased visual data from same specimen, 5) complete tissue preservation for ancillary studies such as DNA analysis and 6) inherent benefits of digital data such as reduced risk of loss, ready remote review by experts, and amenability to machine learning tools. Hematopoietic tissue evaluation would similarly benefit from these advantages, but unfortunately the systems developed thus far lack the resolution typically needed for visual examination of hematopoietic tissues. For this Phase I SBIR proposal, an objective is to develop customized optics to improve the resolution of our current microscopes and thereby enable use in the specialized field of hematology. Commercially available objective lenses that are compatible with our immersion medium are either limited to numerical apertures (NA) that are less than one, affecting resolution and image quality, or have insufficient working distances for imaging past the coverslip and surface roughness to obtain complete sections. We will design and test a custom objective lens with high NA and long working distance, suited for our proprietary reagents. Integrating such a lens into our microscope will also require the design of a custom scan lens, custom beam conditioning optics, and a custom polygon scanner. An associated goal is to develop a novel approach to preparing bone marrow aspiration specimens that will make them amenable to imaging with CHiMP, potentially reducing the need for core biopsies by permitting unambiguous morphologic categorization of cell subtypes in their architectural context, without the routine need for immunohistochemistry, and while preserving nucleic acids for molecular/genetic evaluation.

IC Name
NATIONAL CANCER INSTITUTE
  • Activity
    R43
  • Administering IC
    CA
  • Application Type
    1
  • Direct Cost Amount
  • Indirect Cost Amount
  • Total Cost
    224713
  • Sub Project Total Cost
  • ARRA Funded
    False
  • CFDA Code
    394
  • Ed Inst. Type
  • Funding ICs
    NCI:224713\
  • Funding Mechanism
    SBIR-STTR RPGs
  • Study Section
    ZRG1
  • Study Section Name
    Special Emphasis Panel
  • Organization Name
    APPLIKATE TECHNOLOGIES, LLC
  • Organization Department
  • Organization DUNS
    079159115
  • Organization City
    WESTON
  • Organization State
    CT
  • Organization Country
    UNITED STATES
  • Organization Zip Code
    068832616
  • Organization District
    UNITED STATES