Patent Application
20160130254
The present invention relates to therapeutically active nonsteroidal compounds and pharmaceutically acceptable salts thereof useful in the treatment of nuclear receptor, especially steroid receptor, and in particular androgen receptor (AR) dependent conditions and diseases, and to pharmaceutical compositions containing such compounds.
In recent years, there has been growing interest in the development of nonsteroidal modulators for steroid receptors for therapeutical use. It has been shown that nonsteroidal ligands can achieve better receptor selectivity and better physicochemical, pharmacokinetic and pharmacological properties. For androgen receptor (AR), nonsteroidal AR antagonists (antiandrogens), such as bicalutamide, are now used clinically to counteract the undesirable actions of excessive androgens, particularly in the treatment of prostate cancer.
Androgens such as testosterone and its conversion product dihydrotestosterone (DHT), functioning through the AR, are essential for the initiation and progression of prostate cancer. Thus, treatment of advanced prostate cancer involves androgen-ablation therapies, such as surgical castration or hormonal manipulation using gonadotropin-releasing hormone (GnRH) agonists, anti-androgens or both. Although such therapies initially lead to disease regression, eventually all patients progress to a castration resistant late stage that is refractory to current therapies. Castration-resistant prostate cancer (CRPC) is often associated with increased levels of AR. First generation anti-androgens such as bicalutamide display agonistic properties in cells engineered to express higher AR levels. In vitro and in vivo, increased AR expression has been shown to confer resistance of prostate cancer cell lines to anti-androgen therapy. To overcome resistance problems, second generation anti-androgens that retain antagonism in cells expressing excess AR may have utility in the treatment of CRPC.
Prostate cancer can be also treated by inhibiting the biosynthesis of androgens. In the testes and adrenal glands, the last step in the biosynthesis of testosterone involves two key reactions, which are both catalyzed by a single enzyme, the cytochrome P450 monooxygenase 17α-hydroxylase/17,20-lyase (CYP17). Ketoconazole, an antifungal agent, which is also a modest CYP17 inhibitor has been used clinically for the treatment of prostate cancer. It has been reported that careful scheduling of treatment can produce prolonged responses in otherwise hormone-refractory prostate cancer patients. Although ketoconazole has been withdrawn from the use because of liver toxicity and other side effects, this suggests that more potent and selective inhibitors of CYP17 could provide useful agents for treating prostate cancer, even in advanced stages and in some patients who may appear to be hormone refractory.
Recently, a potent CYP17 inhibitor abiraterone was approved in combination with prednisone for the treatment of CRPC. Abiraterone has been reported to increase survival and to delay clinical decline and initiation of chemotherapy in CRPC patients who have had no prior chemotherapy.
It has been found that compounds of formula (I) are potent androgen receptor antagonists (inhibitors) and/or potent CYP17 inhibitors. The compounds of the invention are therefore useful as medicaments in the treatment of cancer, particularly prostate cancer, and other androgen dependent conditions and diseases where androgen antagonism is desired. The compounds of formula (I) which possess both AR antagonism and CYP17 inhibition are useful as dual inhibitors combining the benefits of both inhibitory mechanisms.
The present invention provides compounds of formula (I)
wherein
ring atoms Z1 and Z2 are, independently, C or N provided that at least one of ring atoms Z1 and Z2 is C;
A is a non-aromatic 3-7 membered carbocyclic or a non-aromatic 5-6 membered heterocyclic ring;
B is a 5-6 membered heterocyclic ring, or, in case that A is a non-aromatic 3-7 membered carbocyclic ring, B can also be a 7-12 membered heterocyclic ring;
R1 is halogen, CHF2, CF3, C1-7 alkyl or C1-7 alkoxy;
R2 is cyano or nitro;
R3 is H, halogen or C1-7 alkyl;
R4 is C1-7 alkyl, C2-7 alkenyl, C3-7 cycloalkyl, C3-7 cycloalkyl C1-7 alkyl, hydroxy C1-7 alkyl, halo C1-7 alkyl, C1-7 alkoxy C1-7 alkyl, C1-7 alkylcarbonyl or phenyl C1-7 alkyl, or, in case A is a non-aromatic 3-7 membered carbocyclic ring and B is an aromatic 5-6 membered heterocyclic ring, R4 can also be hydrogen;
R5 is H, OH, C1-7 alkyl, C1-7 alkoxy or hydroxy C1-7 alkyl;
R5′, R6′ and R6 are, independently, H, OH, C1-7 alkyl or halogen;
or, in case R6′ and R6 are attached to the same carbon atom of the ring, R6′ and R6 may, together with the carbon atom which they are attached to, form a C3-7 cycloalkyl ring;
R7 is H, OH, cyano, halogen, C1-7 alkyl, C3-7 cycloalkyl, C1-7 alkoxy, hydroxy C1-7 alkyl, halo C1-7 alkyl, cyano C1-7 alkyl, halo C1-7 alkoxy, C1-7 alkoxy C1-7 alkyl, hydroxy C1-7 alkoxy C1-7 alkyl, C1-7 alkyl carbonyl C1-7 alkyl or —C1-7 alkyl-X—(CH2)n—R9 or R9;
R8 is H or C1-7 alkyl;
R9 is an optionally substituted 3-7 membered carbocyclic ring, an optionally substituted 4-6 membered heterocyclic ring, or —NR10R11;
X is a bond, oxygen or —NH—;
n=0-3;
R10 and R11 are, independently, H, C1-7 alkyl or C1-7 alkyl carbonyl;
or a pharmaceutically acceptable salt thereof.
In one embodiment of compounds of formula (I) are compounds, wherein ring atom Z2 is C. In another embodiment of compounds of formula (I) are compounds, wherein ring atom Z1 is C. In still another embodiment both ring atoms Z1 and Z2 are C.
In another embodiment of compounds of formula (I) are compounds, wherein A is a non-aromatic 3-7 membered carbocyclic ring. In another embodiment, A is a non-aromatic 5-6 membered heterocyclic ring.
In another embodiment of compounds of formula (I) are compounds, wherein A is a cyclobutyl, cyclopentyl, cyclohexyl, cyclopentenyl, cyclohexenyl, piperidinyl, pyrrolidinyl, dihydropyranyl, tetrahydropyranyl, tetrahydropyridazinyl, dihydrothiopyranyl or azabicyclo[2.2.1]heptanyl ring.
In another embodiment of compounds of formula (I) are compounds, wherein A is a cyclopentyl, cyclohexyl, cyclopentenyl or cyclohexenyl ring.
In another embodiment of compounds of formula (I) are compounds, wherein A is any one of the following groups wherein the asterisk denotes the point of attachment to the non-cyclic nitrogen atom of formula (I)
and wherein R5, R5′, R6 and R6′, as defined above, are attached to the above A-rings.
In another embodiment of compounds of formula (I) are compounds, wherein B is a imidazolyl, 1,2,4-triazolyl, 1,2,3-triazolyl, pyridinyl, tetrazolyl, pyrimidinyl, 1,3,4-oxadiazolyl, pyrazolyl, benzo[d]imidazolyl, pyrazinyl, 1,3,4-thiadiazolyl, oxazolyl, thiazolyl or isoxazolyl ring.
In another embodiment of compounds of formula (I) are compounds wherein B is a imidazolyl, pyridinyl, 1,2,4-triazolyl, 1,2,3-triazolyl, thiazolyl or oxazolyl ring.
In another embodiment of compounds of formula (I) are compounds, wherein B is any one of the following groups or tautomers thereof wherein the asterisk denotes the point of attachment to the A-ring of formula (I)
wherein each of the above rings are substituted by R7 and R8, as defined above.
In another embodiment of compounds of formula (I) are compounds, wherein R9 is a imidazolyl, pyrazolyl, oxetanyl, thiazolyl, pyridinyl, phenyl or morpholinyl ring which may be substituted with one C1-7 alkyl or one C1-7 alkoxy group.
In a subclass of the above embodiments of compounds of formula (I), R1 is CF3 or chloro, R2 is cyano and R3 is H, methyl or fluoro.
In a subclass of the above embodiments of compounds of formula (I), R4 is C1-7 alkyl, C2-7 alkenyl, C3-7 cycloalkyl or C3-7 cycloalkyl C1-7 alkyl, in particular C1-7 alkyl, and especially methyl or ethyl.
In a subclass of the above embodiments of compounds of formula (I), R5 and R5′ are, independently, H or C1-7 alkyl, and R6 and R6′ are, independently, H or OH. In another subclass of the above embodiments of compounds of formula (I), R5 and R5′ are, independently, H or methyl, and R6 and R6′ are, independently, H or OH. In still another subclass of the above embodiments of compounds of formula (I), R5 and R5′ are methyl, and R6 and R6′ are, independently, H or OH. In one particular subclass of the above class, R5 and R5′ are attached to a same carbon atom of the ring A.
In a subclass of the above embodiments of compounds of formula (I), R7 is H, halogen, C1-7 alkyl, C1-7 alkoxy, hydroxy C1-7 alkyl or C1-7 alkoxy C1-7 alkyl.
According to one particular embodiment, Z1 and Z2 are C, R1 is CF3 or chloro, R2 is cyano, R3 is H, methyl or fluoro, R4 is methyl or ethyl, A is a ring of formula (1), (2), (4), (5), (6), (7), (8), (9) or (14), R5 and R5′ are, independently, H or methyl, and R6 and R6′ are H, B is a ring of formula (1′), (2′), (3′), (4′), (5′), (8′), (11′), (13′), (18′) or (22′) or a tautomer thereof.
The present invention provides further a method for the treatment or prevention of androgen receptor (AR) dependent conditions, comprising administering to a subject in need thereof a therapeutically effective amount of a compound of formula (I). For example, the AR dependent condition to be treated or prevented is cancer such as prostate cancer, benign prostatic hyperplasia, androgenic alopecia or acne. According to one embodiment, the AR dependent condition to be treated or prevented is castration-resistant prostate cancer (CRPC).
The present invention also provides a pharmaceutical composition comprising a compound of formula (I) together with a pharmaceutically acceptable carrier.
The compounds of the invention can be prepared by a variety of synthetic routes analogously to the methods known in the literature using suitable starting materials. The compounds according to formula (I) can be prepared e.g. analogously or according to the following reaction Schemes.
Optically active enantiomers or diastereomers of compounds of formula (I) can be prepared e.g. by resolution of the racemic end product by known methods or by using suitable optically active starting materials. Similarly, racemic compounds of formula (I) can be prepared by using racemic starting materials. Resolution of racemic compounds of formula (I) or a racemic starting material thereof can be carried out, for example, by converting the racemic compound into its diastereomeric salt mixture by reaction with an optically active acid and subsequent separation of the diastereomers by crystallization. Representative examples of said optically active acids include, but are not limited to, D-tartaric acid and dibenzoyl-D-tartaric acid. Alternatively, preparative chiral chromatography may be used for resolution of the racemic mixture.
Some compounds included in the formula (I) can be obtained by converting the functional groups of the other compounds of formula (I) obtained in accordance with the following Schemes, by well known reaction steps such as oxidation, reduction, hydrolysis, acylation, alkylation, amidation, amination, sulfonation and others. It should be noted that any appropriate leaving groups, e.g. N-protecting groups, such as a t-butoxycarbonyl (t-BOC) group or a phenylsulfonyl group, can be used in well known manner during the syntheses in order to improve the selectivity of the reaction steps. Any protected functionality can be subsequently deprotected in a manner known in the art.
For example, compounds of formula (I) can be prepared according to the reaction Scheme 1, wherein R1 to R8, A, B, Z1 and Z2 are as defined above, X1 is a halogen, suitably fluoro or iodo, and X2 is a halogen, suitably iodo. In the method of Scheme 1, the amine compound [1] is coupled with the halide [2] in the presence of DIPEA or Cs2CO3 in a suitable solvent such as DMSO or DMF at elevated temperature to obtain amine [3]. This compound can be reacted with halide [4] in the presence of a strong base, such as sodium hydride, sodium hexamethyldisilazide or t-BuONa, in a suitable solvent such as DMF to obtain the compound of formula (I).
Alternatively, in the first step of the above Scheme 1 compound [1′] can be used instead of compound [1] such as to obtain directly a compound of formula (I).
Compound [3] of Scheme 1 can also be prepared according to the Scheme 2, wherein R1 to R8, A, B, Z1 and Z2 are as defined above.
Compound [1] of Scheme 1 can be prepared according to the Scheme 3, wherein R5 to R8, A and B are as defined above, by reacting compound [5] with hydroxylamine hydrochloride in suitable solvent such as pyridine, followed by reduction of the oxime group to amine group by hydrogenation or by using a reducing agent such as zinc or LiAlH4.
Alternatively, compound [1] of Scheme 1 can be prepared according to the Scheme 4, wherein R5 to R8, A and B are as defined above. Cerium (III) chloride in conjunction with sodium borohydride in suitable solvent such as methanol can be used to reduce compound [5] to corresponding alcohol [8] which is then reacted with diphenylphosphoryl azide in the presence of DBU to yield azide derivative [9]. The azide group can be reduced to amine group using triphenylphosphine in a suitable solvent such as methanol.
Alternatively, compound [1] of Scheme 1 can be prepared according to the Scheme 4b, wherein R5 to R8, A and B are as defined above. According to this method the compound [5] is first treated with ammonia solution and titanium (IV)isopropoxide and thereafter with sodium borohydride.
Compounds of formula (I) wherein A is a non-aromatic 5-6 membered heterocyclic ring attached to the carbon atom of the B-ring via the ring atom N can be suitably prepared according to Scheme 5, wherein R1 to R8, A, B, Z1 and Z2 are as defined above, and X3 is a halogen, suitably bromo.
Compounds of formula (I) can also be prepared according to Scheme 6, wherein R1 to R8, A, B, Z1 and Z2 are as defined above, using Suzuki reaction in the presence of palladium catalyst.
Compounds of formula (I) wherein A is a 3-7 membered unsaturated carbocyclic ring can also be suitably prepared using the method of Scheme 7, wherein R1 to R8, B, Z1 and Z2 are as defined above, and X4 is a halogen, suitably bromo or iodo.
Starting materials of the above Schemes are commercially available or can be prepared according to known methods.
Pharmaceutically acceptable salts are well known in the field of pharmaceuticals. Non-limiting examples of suitable salts include metal salts, ammonium salts, salts with an organic base, salts with an inorganic acid, salts with organic acid, and salts with basic or acidic amino acid. Non-limiting examples of metal salts include alkali metal salts such as sodium salt and potassium salt; alkaline earth metal salts such as calcium salt, and magnesium salt. Non-limiting examples of salts with inorganic or organic acids include chlorides, bromides, sulfates, nitrates, phosphates, sulfonates, methane sulfonates, formates, tartrates, maleates, citrates, benzoates, salicylates, ascorbates, acetates, oxalates, fumarates, hemifumarates, and succinates. Pharmaceutically acceptable esters, when applicable, may be prepared by known methods using pharmaceutically acceptable acids that are conventional in the field of pharmaceuticals and that retain the pharmacological properties of the free form. Non-limiting examples of these esters include esters of aliphatic or aromatic alcohols, e.g. methyl, ethyl, propyl, isopropyl, butyl, isobutyl, sec-butyl, tert-butyl esters. Phosphate esters and carbonate esters, are also within the scope of the invention.
The terms employed herein have the following meanings:
The term “halo” or “halogen”, as employed herein as such or as part of another group, refers to chlorine, bromine, fluorine or iodine.
The term “C1-7 alkyl”, as employed herein as such or as part of another group, refers to a straight or branched chain saturated hydrocarbon group having 1, 2, 3, 4, 5, 6 or 7 carbon atom(s). Representative examples of C1-7 alkyl include, but are not limited to, methyl, ethyl, n-propyl, iso-propyl, n-butyl, iso-butyl, sec-butyl, tert-butyl, n-pentyl, iso-pentyl and n-hexyl. One preferred embodiment of “C1-7 alkyl” is C1-3 alkyl. The term “C1-3 alkyl” refers to a preferred embodiment of “C1-7 alkyl” having 1, 2 or 3 carbon atoms.
The term “C2-7 alkenyl”, as employed herein as such or as part of another group, refers to an aliphatic hydrocarbon group having 2, 3, 4, 5, 6 or 7 carbon atoms and containing one or several double bonds. Representative examples include, but are not limited to, ethenyl, propenyl and cyclohexenyl.
The term “C3-7 cycloalkyl”, as employed herein as such or as part of another group, refers to a saturated cyclic hydrocarbon group containing 3, 4, 5, 6 or 7 carbon atoms. Representative examples of cycloalkyl include, but are not limited to, cyclopropyl, cyclobutyl, cyclopentyl and cyclohexyl.
The term “C3-7 cycloalkyl C1-7 alkyl”, as employed herein refers to a C3-7 cycloalkyl group, as defined herein, appended to the parent molecular moiety through a C1-7 alkyl group, as defined herein.
The term “hydroxy”, as employed herein as such or as part of another group, refers to an —OH group.
The term “cyano”, as employed herein as such or as part of another group, refers to a —CN group.
The term “carboxy”, as employed herein as such or as part of another group, refers to —COOH group.
The term “carbonyl”, as employed herein as such or as part of another group, refers to a carbon atom double-bonded to an oxygen atom (C═O).
The term “oxo”, as employed herein as such or as part of another group, refers to oxygen atom linked to another atom by a double bond (═O).
The term “C1-7 alkoxy”, as employed herein as such or as part of another group, refers to C1-7 alkyl, as defined herein, appended to the parent molecular moiety through an oxygen atom. Representative examples of C1-7 alkoxy include, but are not limited to methoxy, ethoxy, propoxy, butoxy, isobutoxy, sec-butoxy and tert-butoxy.
The term “hydroxy C1-7 alkyl”, as employed herein, refers to at least one hydroxy group, as defined herein, appended to the parent molecular moiety through a C1-7 alkyl group, as defined herein. Representative examples of hydroxy C1-7 alkyl include, but are not limited to, hydroxymethyl, 2,2-dihydroxyethyl, 1-hydroxyethyl, 3-hydroxypropyl, 1-hydroxypropyl, 1-methyl-1-hydroxyethyl and 1-methyl-1-hydroxypropyl.
The term “halo C1-7 alkyl”, as employed herein, refers to at least one halogen, as defined herein, appended to the parent molecular moiety through a C1-7 alkyl group, as defined herein. Representative examples of halo C1-7 alkyl include, but are not limited to, fluoromethyl, difluoromethyl, trifluoromethyl, 2-chloroethyl and 3-bromopropyl.
The term “cyano C1-7 alkyl”, as employed herein, refers to a cyano group, as defined herein, appended to the parent molecular moiety through a C1-7 alkyl group, as defined herein. Representative examples of cyano C1-7 alkyl include, but are not limited to, cyanomethyl, 1-cyanoethyl, 1-cyanopropyl and 2-cyanopropyl.
The term “halo C1-7 alkoxy”, as employed herein, refers to at least one halogen, as defined herein, appended to the parent molecular moiety through a C1-7 alkoxy group, as defined herein.
The term “phenyl C1-7 alkyl”, as employed herein, refers to at least one phenyl group appended to the parent molecular moiety through a C1-7 alkyl group, as defined herein.
The term “C1-7 alkyl carbonyl”, as employed herein as such or as part of another group, refers to a C1-7 alkyl group, as defined herein, appended to the parent molecular moiety through a carbonyl group, as defined herein.
The term “C1-7 alkoxy C1-7 alkyl”, as employed herein as such or as part of another group, refers to at least one C1-7 alkoxy group, as defined herein, appended to the parent molecular moiety through an C1-7 alkyl group, as defined herein.
The term “hydroxy C1-7 alkoxy”, as employed herein such or as part of another group, refers to at least one hydroxy group, as defined herein, appended to the parent molecular moiety through an C1-7 alkoxy group, as defined herein.
The term “hydroxy C1-7 alkoxy C1-7 alkyl”, as employed herein, refers to a hydroxy C1-7 alkoxy group, as defined herein, appended to the parent molecular moiety through an C1-7 alkyl group, as defined herein.
The term “4-6 membered heterocyclic ring” as employed herein, refers to a saturated, partially saturated or aromatic ring with 4, 5 or 6 ring atoms, of which 1-4 atoms are heteroatoms selected from a group consisting of N, O and S. Representative examples of a 4-6 membered heterocyclic ring include, but are not limited to, oxetanyl, pyrazolyl, 1,2,4-triazol-1-yl, 1,2,3-triazol-1-yl, pyrimidinyl, pyridinyl, tetrazolyl, piperazinyl, furanyl, morpholinyl, piperidinyl, pyrrolidinyl, thiazolyl, isoxazolyl, pyrazinyl tetrahydropyranyl, 1,2,4-oxadiazolyl, oxazolyl, imidazolyl, indolyl and 4,5-dihydroimidazolyl rings.
The term “5-6 membered heterocyclic ring” as employed herein, refers to a saturated, partially saturated or aromatic ring with 5 or 6 ring atoms, of which 1-4 atoms are heteroatoms selected from a group consisting of N, O and S. Representative examples of a 5-6 membered heterocyclic ring include, but are not limited to, pyrazolyl, 1,2,4-triazol-1-yl, 1,2,3-triazol-1-yl, pyrimidinyl, pyridinyl, tetrazolyl, piperazinyl, furanyl, morpholinyl, piperidinyl, pyrrolidinyl, thiazolyl, isoxazolyl, pyrazinyl tetrahydropyranyl, 1,2,4-oxadiazolyl, oxazolyl, imidazolyl, indolyl and 4,5-dihydroimidazolyl rings.
The term “7-12 membered heterocyclic ring” as employed herein, refers to a monocyclic or bicyclic saturated, partially saturated or aromatic ring with 7 to 12 ring atoms, of which 1-5 atoms are heteroatoms selected from a group consisting of N, O and S. Representative examples of a 7-12 membered heterocyclic ring include, but are not limited to, indazolyl, pyrazolo[1,5-a]pyrimidinyl, benzo[d]imidazolyl, imidazo[4,5-b]pyridinyl, 4,5,6,7-tetrahydrobenzo[d]imidazolyl and benzofuranyl rings.
The term “3-7 membered carbocyclic ring” as employed herein, refers to a saturated, partially saturated or aromatic ring with 3 to 7 ring atoms consisting of carbon atoms only. Representative examples of a 3-7 membered carbocyclic ring include, but are not limited to, phenyl, cyclohexyl, cyclohexenyl, cyclopentyl, cyclopentenyl and cyclobutyl rings.
The term “non-aromatic 3-7 membered carbocyclic ring” as employed herein, refers to a saturated or partially saturated ring with 3 to 7 ring atoms consisting of carbon atoms only. Representative examples of a non-aromatic 3-7 membered carbocyclic ring include, but are not limited to, cyclohexyl, cyclohexenyl, cyclopentyl, cyclopentenyl and cyclobutyl rings.
The term “non-aromatic 5-6 membered heterocyclic ring” as employed herein, refers to a saturated or partially saturated ring with 5 or 6 ring atoms, of which 1-3 atoms are heteroatoms each independently selected from N, O and S, and wherein the Hückel rule is not satisfied by the ring system. Representative examples of a non-aromatic 5-6 membered heterocyclic ring include, but are not limited to, pyrrolidinyl, piperidinyl, dihydropyranyl, dihydrothiopyranyl and tetrahydropyridazinyl rings.
The term “aromatic 5-6 membered heterocyclic ring” as employed herein, refers to a aromatic ring with 5 or 6 ring atoms, of which 1-4 atoms are heteroatoms each independently selected from N, O and S, and wherein the Hückel rule is satisfied by the ring system. Examples of aromatic 5-6 membered heterocyclic rings include imidazolyl, 1,2,4-triazolyl, 1,2,3-triazolyl, pyridinyl, tetrazolyl, pyrimidinyl, 1,3,4-oxadiazolyl, pyrazolyl, benzo[d]imidazolyl, pyrazinyl, 1,3,4-thiadiazolyl, oxazolyl, thiazolyl or isoxazolyl rings. Preferred aromatic 5-6 membered heterocyclic rings are imidazolyl, pyridinyl, 1,2,4-triazolyl, 1,2,3-triazolyl, thiazolyl and oxazolyl rings.
The term “substituted” as used herein in connection with various residues refers to halogen substituents, such as fluorine, chlorine, bromine, iodine, or C1-7 alkyl, C3-7 cycloalkyl, hydroxy, amino, nitro, cyano, thiol, methylsulfonyl, C1-7 alkoxy, halo C1-7 alkyl, hydroxy C1-7 alkyl or amino C1-7 alkyl substituents. Preferred are halogen, C1-7 alkyl, hydroxy, amino, halo C1-7 alkyl, C1-7 alkoxy and methylsulfonyl substituents. In one group of preferred substituents are one or two C1-7 alkyl substituents, particularly one or two C1-3 alkyl substituents, particularly methyl and ethyl substituents.
The “substituted” groups may contain 1 to 3, preferably 1 or 2, of the above mentioned substituents.
The definition of formula (I) above is inclusive of all the possible isotopes and isomers, such as stereoisomers, of the compounds, including geometric isomers, for example Z and E isomers (cis and trans isomers), and optical isomers, e.g. diastereomers and enantiomers, and prodrug esters, e.g. phosphate esters and carbonate esters.
It will be appreciated by those skilled in the art that the present compounds may contain at least one chiral center. Accordingly, the compounds may exist in optically active or racemic forms. It is to be understood that the formula (I) includes any racemic or optically active form, or mixtures thereof. In one embodiment, the compounds are the pure (R)-isomers. In another embodiment, the compounds are the pure (S)-isomers. In another embodiment, the compounds are a mixture of the (R) and the (S) isomers. In another embodiment, the compounds are a racemic mixture comprising an equal amount of the (R) and the (S) isomers. The compounds may contain two chiral centers. In such case, according to one embodiment, the compounds are a mixture of diasteromers. According to another embodiment, the compounds of the invention are a mixture of enantiomers. According to still another embodiment, the compounds are pure enantiomers. The individual isomers may be obtained using the corresponding isomeric forms of the starting material or they may be separated after the preparation of the end compound according to conventional separation methods. For the separation of optical isomers, e.g. enantiomers or diastereomers, from the mixture thereof the conventional resolution methods, e.g. fractional crystallisation, may be used.
The present compounds may also exist as tautomers or equilibrium mixtures thereof wherein a proton of a compound shifts from one atom to another. Examples of tautomerism include, but are not limited to, amido-imido, keto-enol, phenol-keto, oxime-nitroso, nitro-aci, imine-enamine, annular tautomerism of heterocyclic rings, and the like. Tautomeric forms are intended to be encompassed by compounds of formula (I), even though only one tautomeric form may be depicted.
Examples of preferred compounds of formula (I) include
Compounds of the invention may be administered to a patient in therapeutically effective amounts which range usually from about 0.1 to about 1000 mg per day depending on the age, weight, ethnic group, condition of the patient, condition to be treated, administration route and the active ingredient used. The compounds of the invention can be formulated into dosage forms using the principles known in the art. The compound can be given to a patient as such or in combination with suitable pharmaceutical excipients in the form of tablets, granules, capsules, suppositories, emulsions, suspensions or solutions. Choosing suitable ingredients for the composition is a routine for those of ordinary skill in the art. Suitable carriers, solvents, gel forming ingredients, dispersion forming ingredients, antioxidants, colours, sweeteners, wetting compounds and other ingredients normally used in this field of technology may also be used. The compositions containing the active compound can be given enterally or parenterally, the oral route being the preferred way. The contents of the active compound in the composition is from about 0.5 to 100%, preferably from about 0.5 to about 20%, per weight of the total composition.
The compounds of the invention can be given to the subject as the sole active ingredient or in combination with one of more other active ingredients for treatment of a particular disease, for example cancer.
The present invention will be explained in more detail by the following experiments and examples. The experiments and examples are meant only for illustrating purposes and do not limit the scope of the invention defined in claims.
Antagonism of test compounds for AR was measured by reporter gene assay in human embryonic kidney (HEK293) cells stably transfected with an expression vector encoding full-length human AR and androgen responsive luciferase reporter gene construct (hAR/HEK293 cells). To determine antagonism for hAR, the cells were treated simultaneously with increasing concentrations of the test compound and submaximal concentration of testosterone (usually 0.45 nM). The final DMSO concentration was 1%. All test compounds were studied in triplicates. The cells were incubated for 24 before measurement of luciferase activity using Luciferase Assay System (Promega Corporation).
The results of the AR antagonism assay are shown in Table 1.
17,20 Lyase (CYP17) Inhibition
The ability of the test compounds to inhibit 17,20 lyase catalysed conversion of 17α-hydroxypregnenolone to dehydroepiandrosterone and acetic acid was measured by acetic acid release assay (AARA) on human H295R adrenocortical carcinoma cell line (Grigoryev, D. N. et al., Analytical Biochemistry 1999; 267:319-330). The cell line has been shown to express all the key steroidogenic enzymes. To determine the half maximal inhibitory concentration (IC50) of the test compounds on 17,20 lyase inhibition, the cells were treated overnight (16-19 h) with increasing concentrations of the test compounds in the presence of 17α-[21-3H]hydroxypregnenolone (American Radiolabelled Chemicals). The final DMSO concentration was 1%. Cell culture medium was extracted with dextran-coated charcoal suspension (Isomaa, V. et al., Endocrinology 1982; 111(3):833-843). 3H-acetic acid was determined by mixing 100 μl of supernatant fraction in 200 μl of scintillation fluid (OptiPhase SuperMix, Perkin Elmer). Radioactivity was measured using a Microbeta scintillation counter (1450 MicroBeta Trilux, Wallac). All the test compounds were studied in quadruplicates.
To a stirred solution of 2-chloro-1-ethyl-1H-imidazole (1.19 g, 9.11 mmol) in dry THF (60 ml) under N2 (cooled to −78° C.) were added TMEDA (2.04 ml, 13.66 mmol) and 2.5 M n-BuLi (5.46 ml, 13.66 mmol) over a period of 45 min. The mixture was stirred at this temperature for 45 min. Then, triisopropyl borate (3.15 ml, 13.66 mmol) was added. The mixture stirred for 1.5 h and then warmed to RT over a period of 30 min. Aqueous HCl was added until pH reached 5. The organic phase was separated, dried and evaporated. Triturating with diethyl ether gave 1.29 g of the title compound. [M+1]=175. 1H NMR (400 MHz, MeOH-d4): 1.30 (t, 3H) 4.28 (q, 2H) 7.38 (s, 1H).
The compound of Intermediate Example 1(a) (500 mg, 2.87 mmol) was dissolved in methanol (55 ml). The mixture was hydrogenated in H-Cube using 10% Pd/C as a catalyst (20 bar, 20° C., 1 ml/min). Methanol was evaporated giving 0.41 g of the title compound. [M+1]=140. 1H NMR (400 MHz, MeOH-d4): 1.50 (t, 3H) 4.48 (q, 2H) 7.81 (s, 1H) 9.02 (s, 1H).
A mixture of 4-amino-2-(trifluoromethyl)benzonitrile (2.12 g, 11.4 mmol), 3,4-dihydroxycyclobut-3-ene-1,2-dione (59 mg, 0.51 mmol), and 4,4-dimethylcyclohex-2-enone (1.5 ml, 1.42 g, 11.4 mmol) was stirred at 60° C. for 12 h. The mixture was triturated in 1:1 diethyl ether-heptane yielding 2.74 g of the title compound. 1H NMR (400 MHz, DMSO-d6): 1.01 (3H, s), 1.07 (3H, s), 1.61-1.80 (2H, m), 2.17-2.26 (1H, m), 2.33-2.48 (3H, m), 3.80-3.92 (1H, m), 6.95-7.02 (2H, m), 7.21 (1H, broad s), 7.70 (1H, d).) m/z=311.3 (M+1)+.
The mixture of the compound of Example 1(a) (5.48 g, 17.7 mmol) in dry methanol (100 ml) and NaBH4 (0.67 g, 17.7 mmol) was stirred at 0° C. for 1.5 h. Yield 5.50 g of the title compound. m/z=313.3 (M+1)+.
The compound was prepared from the compound of Example 1(b) (5.50 g, 17.6 mmol), 1H-imidazole (3.60 g, 52.8 mmol) and TBSCl (3.98 g, 26.4 mmol) in dry DCM (105 ml). The crude product was purified by flash chromatography. Yield 6.90 g. m/z=427.4 (M+1)+.
The mixture of the compound of Example 1(c) (4.05 g, 9.5 mmol), 60% dispersion of NaH in mineral oil (1.14 g, 28.5 mmol) and iodoethane (2.29 ml, 4.44 g, 28.5 mmol) in dry DMF (45 ml) was heated at 80° C. until the reaction was completed. Crude product was crystallized from heptane yielding 3.13 g of the title compound. m/z=455.5 (M+1)+.
The compound was prepared from the compound of Example 1(d) (3.11 g, 6.8 mmol) and SOCl2 (2.0 ml, 3.26 g, 27.4 mmol) in dry MeOH (50 ml). Yield 2.32 g. m/z=341.4 (M+1)+.
The compound was prepared from the compound of Example 1(e) (2.38 g, 7.0 mmol) and Dess-Martin periodinane (4.45 g, 10.5 mmol) in dry DCM (75 ml). Yield 2.14 g. m/z=339.4 (M+1)+.
The compound was prepared from 4-iodo-N,N-dimethyl-1H-imidazole-1-sulfonamide (0.58 g, 1.92 mmol), 3 M EtMgBr solution in Et2O (0.74 ml, 2.22 mmol) and the compound of Example 1(f) (0.50 g, 1.48 mmol) in dry DCM (18 ml). The crude product was purified with flash chromatography. Yield 0.32 g. m/z=514.5 (M+1)+.
The compound of Example 1(g) (1.09 g, 2.12 mmol) was cooled in an ice-bath. Ice-cold concentrated H2SO4 (5.66 ml, 106 mmol) was added and the mixture was stirred for 15 min in an icebath and allowed to warm to RT. After stirring for 1 h 50 g of crushed ice was added. pH was adjusted to 9 with 25% NaOH solution. The mixture was extracted with ethyl acetate. Combined extracts were washed with water and brine, dried, and evaporated. The residue was dissolved in 1,4-dioxane (6 ml), and concentrated HCl (6.11 ml, 74.5 mmol) was added. The resulting solution was stirred for 1.5 h at 90° C., cooled and diluted with water. pH was adjusted to 9 with 2 M NaOH. The mixture was extracted with ethyl acetate. Combined organic phases were washed and evaporated as above. The residue was purified with flash chromatography (heptanes-ethyl acetate gradient) yielding 219 mg of the racemate. The enantiomers were separated using preparative HPLC (Daicel Chiralpack IA, 2 cm×25 cm, 97% TBME+0.2% DEA−3% EtOH+0.2% DEA, 20 ml/min, run time 35 min), yielding 57 mg of enantiomer 1 (rt 15 min), and 41 mg of enantiomer 2 (rt 25 min). 1H NMR (400 MHz, CDCl3): 1.01 (3H, s), 1.07 (3H, s), 1.21 (3H, t), 2.13-2.34 (2H, m), 2.60-2.78 (2H, m), 3.48-3.63 (2H, m), 4.16-4.21 (1H, m), 6.27-6.34 (1H, m), 6.93 (1H, dd), 6.96 (1H, s), 7.08 (1H, s), 7.56 (1H, d), 7.65 (1H, s).
The compound was prepared from 4-amino-2-chlorobenzonitrile (1.74 g, 11.4 mmol), 3,4-dihydroxycyclobut-3-ene-1,2-dione (59 mg, 0.51 mmol) and 4,4-dimethylcyclohex-2-enone (1.5 ml, 1.42 g, 11.4 mmol). Yield 2.71 g. 1H NMR (400 MHz, DMSO-d6): 1.00 (3H, s), 1.06 (3H, s), 1.59-1.78 (2H, m), 2.15-2.26 (1H, m), 2.31-2.47 (3H, m), 3.74-3.83 (1H, m), 6.75 (1H, dd), 6.94 (1H, d), 7.50 (1H, d).) m/z=277.3 (M+1)+.
The compound was prepared from the compound of Example 2(a) (2.20 g, 8.0 mmol) and NaBH4 (0.30 g, 8.0 mmol) in MeOH (50 ml). Yield 2.20 g. m/z=279.3 (M+1)+.
The compound was prepared from the compound of Example 2(b) (2.20 g, 7.9 mmol), 1H-imidazole (1.61 g, 23.7 mmol) and TBSCl (1.78 g, 11.8 mmol). Yield 2.65 g. m/z=393.4, 395.4 (M+1)+.
The compound was prepared from the compound of Example 2(c) (2.38 g, 6.1 mmol), 60% NaH dispersion in mineral oil (0.48 g, 12.1 mmol) and iodomethane (0.75 ml, 1.72 g, 12.1 mmol) in DMF (20 ml). Crude product (2.61 g) was used in the next step without further purification. m/z=407.5, 409.4 (M+1)+.
The compound was prepared from the compound of Example 2(d) (2.38 g, 6.1 mmol) and SOCl2 (1.76 ml, 2.88 g, 24.2 mmol) in methanol (50 ml). Yield 1.63 g. m/z=293.4, (M+1)+.
The compound was prepared from the compound of Example 2(e) (1.62 g, 5.5 mmol) and Dess-Martin periodinane (3.52 g, 8.3 mmol) in DCM (50 ml). Yield 1.43 g. 1H NMR (400 MHz, CDCl3): 1.05 (3H, s), 1.23 (3H, s), 1.61-1.80 (2H, m), 2.36-2.52 (3H, m), 2.79-2.87 (1H, m), 2.89 (3H, s), 3.97 (1H, dd), 6.69 (1H, dd), 6.81 (1H, d), 7.43 (1H, d).) m/z=291.3, (M+1)+.
The compound was prepared from 4-iodo-1-trityl-1H-imidazole (2.56 g, 5.9 mmol), 3 M EtMgBr in Et2O (2.12 ml, 6.4 ml) and the compound of Example 2(f) (1.42 g, 4.9 mmol) in dry DCM (55 ml). The crude product was purified using flash chromatography, and the residue (1.15 g) was treated with H2SO4 (8 ml, 151 mmol), yielding 290 mg of the racemate. The enantiomers were separated on preparative HPLC (Daicel Chiralpack IA, 2 cm×25 cm, 95% TBME+0.2% DEA−5% EtOH+0.2% DEA, 20 ml/min, run time 30 min), yielding 99 mg of enantiomer 1 (rt 15 min) and 97 mg of enantiomer 2 (rt 20 min). 1H NMR (400 MHz, CDCl3): 0.99 (3H, s), 1.04 (3H, s), 2.06-2.15 (1H, m), 2.20-2.30 (1H, m), 2.62-2.69 (2H, m), 2.95 (3H, s), 4.09 (1H, t), 6.24-6.33 (1H, m), 6.71 (1H, dd), 6.91 (1H, d), 6.97 (1H, d), 7.39 (1H, d), 7.61 (1H, d).
A mixture of hydroxylamine HCl (5.95 g, 86 mmol) and 2,2,4,4-tetramethyl-1,3-cyclobutanedione (3.00 g, 21.4 mmol) in pyridine (15 ml) was stirred for 3 days at RT. Water was added, the precipitate was filtered off and washed with water yielding 3.57 g of the title compound. 1H NMR (400 MHz, DMSO-d6): 1.27 (3H, s), 1.37 (6H, s), 1.49 (3H, s), 10.26 (1H, s), 10.31 (1H, s).
A mixture of the compound of Example 3(a) (1.00 g, 5.9 mmol) and Ni/Al alloy (4.02 g, 46.9 mmol) in THF (20 ml) was stirred for 30 min at 60° C. NaOH (2.18 g, 9.3 mmol) in water (20 ml) was added slowly and refluxing was continued for 2 h. The cooled mixture was filtered through a pad of Celite, and the filter cake was washed with THF. The filtrate was evaporated almost to dryness, brine was added, and the solution was extracted with EtOAc. The combined organic phases were washed with brine, dried, and evaporated. The residue was dissolved in EtOAc (20 ml) and filtered. 1 M HCl in Et2O (12 ml) was added to the filtrate with stirring. The precipitate was filtered off and washed with EtOAc and Et2O yielding 0.84 g of the title compound. 1H NMR (400 MHz, DMSO-d6): 1.16 (3H, s), 1.24 (9H, s), 3.00 (2H, m), 8.54 (6H, broad s).
A mixture of 4-fluoro-(2-trifluoromethyl)benzonitrile (0.29 g, 1.53 mmol), the compound of Example 3(b) (0.83 g, 3.83 mmol), DIPEA (1.60 ml. 1.19 g, 9.20 mmol), and DMSO (7 ml) was microwave heated for 2 h at 120° C. Water was added, and the mixture extracted with EtOAc. The combined organic phases were washed with water and brine, dried, and evaporated. The residue was dissolved in EtOAc (5 ml) and 1 M HCl in Et2O (2 ml) was added. The solvents were decanted off and the residue was triturated in 1:5 EtOAc-Et2O yielding 0.21 g of the title compound. 1H NMR (400 MHz, DMSO-d6): 1.07 (3H, s), 1.10 (3H, s), 1.27 (3H, s), 1.28 (3H, s), 2.94-3.16 (1H, m), 3.58-3.68 (1H, m), 6.88 (1H, d), 7.34 (1H, m), 7.75 (1H, d), 8.37 (3H, broad s).
The compound of Example 3(c) (0.20 g, 0.58 mmol) was dissolved in water and pH adjusted to 10 with 2 M NaOH. The free base was extracted into EtOAc, dried, and evaporated. The residue was dissolved in MeOH (2 ml), and 30 w-% aqueous solution of glyoxal (0.22 g, 1.15 mmol), NH4OAc (89 mg, 1.15 mmol), and 37% aqueous formaldehyde (0.051 ml, 1.15 mmol) were added. The residue was purified with flash chromatography yielding 0.14 g of the title compound. m/z=363.4, (M+1)+.
The compound was prepared from the compound of Example 3(d) (0.14 g, 0.39 mmol), 60% NaH (50 mg, 1.27 mmol) and iodoethane (0.092 ml, 0.18 g, 1.15 mmol) in dry DMF (3 ml). The crude residue was filtered through a plug of silica. The trans- and cis-isomers were separated on reverse phase preparative HPLC yielding 22 mg of trans-isomer, 1H NMR (400 MHz, CDCl3): 1.06 (3H, t), 1.20 (6H, s), 1.30 (6H, s), 3.42 (2H, q), 4.04 (1H, s), 4.05 (1H, s), 7.04 (1H, m), 7.10 (1H, s), 7.17 (1H, dd), 7.29 (1H, d), 7.50 (1H, s), 7.68 (1H, d), and 23 mg of cis-isomer, 1H NMR (400 MHz, CDCl3): 1.00 (3H, t), 1.20 (6H, s), 1.36 (6H, s), 3.37 (2H, q), 3.63 (1H, s), 3.92 (1H, s), 7.01 (1H, m), 7.07 (1H, s), 7.24 (1H, dd), 7.36 (1H, d), 7.53 (1H, s), 7.70 (1H, d).
The compound was prepared from 3-(4-(2-methoxyethyl)-4H-1,2,4-triazol-3-yl)cyclohexanamine (139 mg, 0.62 mmol) (cis-enantiomer 1), 4-fluoro-2-(trifluoromethyl)benzonitrile (117 mg, 0.62 mmol) and DIPEA (0.27 ml, 200 mg, 1.55 mmol) in DMSO (4 ml), 100° C., 3 h. Yield 110 mg. 1H NMR (400 MHz, CDCl3): 1.39-1.62 (2H, m), 1.67-1.80 (1H, m), 1.93-2.03 (1H, m), 2.15 (1H, d), 2.25 (1H, d), 2.88-3.00 (1H, m), 3.33 (3H, s), 3.44-3.58 (1H, m), 3.63 (2H, t), 4.10 (2H, t), 6.17 (1H, d), 6.77 (1H, d), 6.98 (1H, d), 7.48 (1H, d), 8.18 (1H, s).
The compound was prepared from the compound of Example 4(a) (110 mg, 0.28 mmol), 60% NaH dispersion (22 mg, 0.56 mmol), and iodoethane (0.045 ml, 87 mg, 0.56 mmol). Yield 100 mg (cis-enantiomer 1). 1H NMR (400 MHz, CDCl3): 1.21 (3H, t), 1.53-2.19 (8H, m), 2.90-3.00 (1H, m), 3.31 (3H, s), 3.44 (2H, q), 3.58-3.68 (2H, m), 3.77-3.87 (1H, m), 4.11 (2H, t), 6.82 (1H, dd), 6.95 (1H, d), 7.54 (1H, d), 8.16 (1H, d).
The compound was prepared from 3-(4-(2-methoxyethyl)-4H-1,2,4-triazol-3-yl)cyclohexanamine (109 mg, 0.49 mmol) (cis-enantiomer 2), 4-fluoro-2-(trifluoromethyl)benzonitrile (92 mg, 0.49 mmol) and DIPEA (0.21 ml, 157 mg, 1.22 mmol) in DMSO (3 ml), 120° C., 3 h. Yield 70 mg. 1H NMR (400 MHz, CDCl3): 1.39-1.62 (2H, m), 1.67-1.80 (1H, m), 1.93-2.03 (1H, m), 2.15 (1H, d), 2.25 (1H, d), 2.88-3.00 (1H, m), 3.33 (3H, s), 3.44-3.58 (1H, m), 3.63 (2H, t), 4.10 (2H, t), 5.85 (1H, d), 6.77 (1H, d), 6.98 (1H, d), 7.48 (1H, d), 8.18 (1H, s).
The compound was prepared from the compound of Example 5(a) (70 mg, 0.18 mmol), 60% NaH dispersion (14 mg, 0.36 mmol), and iodoethane (0.029 ml, 56 mg, 0.36 mmol). Yield 55 mg (cis-enantiomer 2). 1H NMR (400 MHz, CDCl3): 1.21 (3H, t), 1.53-2.19 (8H, m), 2.90-3.00 (1H, m), 3.31 (3H, s), 3.44 (2H, q), 3.58-3.68 (2H, m), 3.77-3.87 (1H, m), 4.11 (2H, t), 6.82 (1H, dd), 6.95 (1H, d), 7.54 (1H, d), 8.16 (1H, d).
To a solution of cyclohexane-1,3-dione (5.0 g, 0.045 mol) in DCM (50 ml) were added oxalyl chloride (5.8 ml, 0.067 mol) and DMF (1 drop) at 0° C. and stirred at RT for 3 h. The mixture was poured into ice-water and extracted with DCM. The organic layer was washed with water, dried (anhydrous Na2SO4), filtered and concentrated under reduced pressure. The crude product was purified by column chromatography over silica gel using 10% EtOAc in hexane as the eluent to give 2.52 g of the title compound. 1H-NMR (400 MHz; CDCl3): 6.22 (s, 1H), 2.68 (t, 2H), 2.40 (t, 2H), 2.05-2.16 (m, 2H); MS: m/z 131.12 [M+H]+.
To a solution of the compound of Example 6(a) (2.5 g, 0.019 mol) in DMF (15 ml) were added K2CO3 (7.96 g, 0.058 mol) and imidazole (1.96 g, 0.029 mol). The mixture was stirred for 5 h at RT, poured into ice-water and extracted with DCM. The organic layer was washed with water, dried, filtered and concentrated. The crude product was purified by column chromatography over basic alumina using 5% MeOH in DCM as the eluent. Yield 800 mg. 1H-NMR (400 MHz; CDCl3): 8.33 (s, 1H), 7.82 (s, 1H), 7.12 (s, 1H), 6.37 (s, 1H), 2.93 (t, 2H), 2.36 (t, 2H), 2.01-2.09 (m, 2H); LC-MS: m/z 163.0 [M+H]+.
To a solution of the compound of Example 6(b) (8.5 g, 0.052 mol) in MeOH (100 ml) were added CeCl3 (25.8 g, 0.105 mol) and NaBH4 (1.9 g, 0.052 mol). The mixture was stirred at RT for 1 h, quenched with 10% aqueous HCl solution and extracted with EtOAc. The organic layer was washed with water, dried, filtered and concentrated. The crude product was purified by recrystallization from DCM/hexane. Yield 6.9 g. 1H-NMR (400 MHz; DMSO-d6): 7.94 (s, 1H), 7.49 (s, 1H), 6.97 (s, 1H), 5.91 (bs, 1H), 4.87 (d, 1H), 4.22 (bs, 1H), 2.43-2.50 (m, 1H), 2.36-2.42 (m, 1H), 1.84-1.92 (m, 1H), 1.72-1.80 (m, 1H), 1.59-1.69 (m, 1H), 1.45-1.54 (m, 1H); LC-MS: m/z 165.09 [M+H]+.
To a mixture of the compound of Example 6(c) (1.6 g, 9.75 mmol) and DPPA (4.02 g, 14.62 mmol) in toluene (40 ml) was added DBU (2.52 g, 16.57 mmol) at 0° C. followed by stirring at RT overnight. The mixture was quenched with water and extracted with EtOAc. The organic layer was washed with water, dried, filtered and concentrated. The crude product was purified by column chromatography over silica gel using 3% MeOH in DCM as the eluent. Yield 1.31 g. 1H-NMR (400 MHz; CDCl3): 7.74 (s, 1H), 7.15 (s, 1H), 7.11 (s, 1H), 5.86 (bs, 1H), 4.16 (bs, 1H), 2.40-2.58 (m, 2H), 1.90-2.04 (m, 2H), 1.78-1.88 (m, 2H); LC-MS: m/z 190.31 [M+H]+.
To a solution of the compound of Example 6(d) (0.35 g, 1.852 mmol) in THF (15 ml) and H2O (5 ml) were added PPh3 (0.53 g, 2.036 mmol) and KOH (0.1 g, 1.852 mmol) at RT followed by stirring for 12 h. The mixture was quenched with water and extracted with EtOAc. The organic layer was washed with water, dried, filtered and concentrated. The crude product was purified by column chromatography over silica gel using 0.1% NH3 and 4.9% MeOH in DCM as the eluent. Yield 180 mg. 1H-NMR (400 MHz; DMSO-d6): 7.89 (s, 1H), 7.45 (s, 1H), 6.96 (s, 1H), 5.84 (bs, 1H), 3.40 (bs, 1H), 2.32-2.46 (m, 2H), 1.74-1.92 (m, 2H), 1.56-1.67 (m, 1H), 1.23-1.33 (m, 1H); LC-MS: m/z 164.12 [M+H]+.
The compound was prepared from the compound of Example 6(e) (0.55 g, 3.4 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.64 g, 3.4 mmol) and DIPEA (1.47 ml, 1.09 g, 8.4 mmol) in DMSO (8 ml), 90° C., 3 h. Yield 0.70 g. 1H NMR (400 MHz, CDCl3): 1.71-1.82 (1H, m), 1.86-2.07 (3H, m), 2.48-2.63 (2H, m), 4.27-4.37 (1H, m), 4.67 (1H, d), 5.80-5.86 (1H, m), 6.74 (1H, dd), 6.90 (1H, d), 7.11 (1H, t), 7.14 (1H, t), 7.58 (1H, d), 7.71 (1H, s).
The compound was prepared from the compound of Example 6(f) (0.70 g, 2.1 mmol), 60% NaH dispersion (0.17 g, 4.2 mmol) and iodomethane (0.20 ml, 0.45 g, 3.2 mmol) in DMF (7 ml), 1 h, yielding 0.32 g of the title compound as a racemic mixture. Enantiomers were separated on preparative HPLC (Daicel Chiralpack IA, 2 cm×25 cm, 96% TBME+0.2% DEA−4% EtOH+0.2% DEA, 25 ml/min, run time 52 min) from 0.27 g of racemic mixture yielding 79 mg of enantiomer 1 (rt 22 min) and 65 mg of enantiomer 2 (rt 43 min). 1H NMR (400 MHz, CDCl3): 1.66-1.77 (1H, m), 1.87-2.17 (3H, m), 2.49-2.70 (2H, m), 2.96 (3H, s), 4.70-4.79 (1H, m), 5.71-5.76 (1H, m), 6.89 (1H, dd), 7.03 (1H, d), 7.12 (1H, m), 7.17 (1H, t), 7.59 (1H, dd), 7.74 (1H, t).
60% NaH dispersion (1.12 g, 28.0 mmol) was washed with dry heptane. Dry DMF (11 ml) was added. Di-tert-butyl hydrazodiformate (2.95 g, 12.7 mmol) in dry DMF (22 ml) was added dropwise. After stirring for 30 min at RT, tert-butyl(1,4-dibromobutan-2-yloxy)dimethylsilane (4.40 g, 12.7 mmol), prepared as in Kumar, A. et al., Bioorg. Med. Chem. Lett., 2012, 4740, in dry DMF (5 ml) was added dropwise. The mixture was stirred at RT overnight and water was added. The resulting mixture was extracted with EtOAc, washed with water and brine, dried and evaporated yielding 4.97 g of the title compound. m/z=417.4, (M+1)+.
The compound of Example 7(a) (4.40 g, 10.6 mmol) was dissolved in dry THF (50 ml). 1 M TBAF in THF (13.2 ml, 13.2 mmol) was added, and the resulting solution was stirred overnight at RT, evaporated, and the residue was purified using flash chromatography. Yield 3.12 g. m/z=325.2, (M+Na)+.
The compound of Example 7(b) (0.75 g, 2.5 mmol) was dissolved in dry DCM (15 ml) and cooled to 0° C. TEA (0.69 ml, 0.50 g, 5.0 mmol) was added, followed by methanesulfonyl chloride (0.29 ml, 0.43 g, 3.7 mmol). After stirring for 1 h, the mixture was diluted with DCM, washed with saturated NH4Cl solution, water and brine, dried, and evaporated. Yield 0.83 g. m/z=381.2, (M+1)+.
The compound of Example 7(c) (0.81 g, 2.1 mmol) was dissolved in DMF (8 ml) and NaN3 (0.28 g, 4.3 mmol) was added. The mixture was stirred for 3 h at 70° C., then overnight at RT, 1 h at 80° C., 8 h at 90° C. and overnight at RT. Water was added and the mixture was extracted with EtOAc. The organic phase was washed with water and brine, dried and evaporated. Yield 0.67 g. m/z=328.3, (M+1)+.
The compound of Example 7(d) (0.66 g, 2.0 mmol) was dissolved in MeOH (15 ml) and 10% Pd/C (0.22 g) was added. The mixture was hydrogenated under atmospheric pressure for 2.5 h, filtered through a pad of Celite and evaporated yielding 0.55 g of the title compound. m/z=302.3, (M+1)+.
The title compound was prepared from the compound of Example 7(e) (0.54 g, 1.8 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.34 g, 1.8 mmol) and DIPEA (0.78 ml, 0.58 g, 4.5 mmol) in DMSO (8 ml), 90° C., 3 h. Yield 0.33 g. m/z=471.4, (M+1)+.
The compound was prepared from the compound of Example 7(f) (0.32 g, 0.68 mmol), 60% NaH dispersion (0.054 g, 1.4 mmol) and iodoethane (0.11 ml, 0.21 g, 1.4 mmol) in DMF (5 ml). Yield 0.33 g. 1H NMR (400 MHz, CDCl3): 1.21 (3H, t), 1.50 (18H, broad s), 1.91 (2H, m), 2.73-3.27 (2H, m), 3.38 (2H, q), 3.79-3.92 (1H, m), 4.16-4.47 (2H, m), 6.91 (1H, m), 7.05 (1H, m), 7.62 (1H, d).
The compound of Example 7(g) (0.33 g, 0.68 mmol) was dissolved in EtOAc (2 ml) and 1 M HCl in Et2O (2.73 ml, 2.7 mmol) was added. After stirring for 1.5 h at RT, another 2.73 ml of 1 M HCl in Et2O was added. After stirring overnight, MeOH (8 ml) was added and stirring was continued for 13 days. The mixture was evaporated and the residue was triturated with a mixture of EtOAc (5 ml) and Et2O (2 ml) yielding 0.19 g of the title compound. m/z=299.3, (M+1)+.
The compound of Example 7(h) (177 mg, 0.48 mmol), dry toluene (4 ml) and DIPEA (0.17 ml, 128 mg, 0.99 mmol) were stirred for 15 min while bubbling with N2. 3-Bromopyridine (0.051 ml, 83 mg, 0.52 mmol), Pd2(dba)3 (22 mg, 0.024 mmol), rac-BINAP (30 mg, 0.048 mmol) and sodium tert-butoxide (64 mg, 0.67 mmol) were added. The mixture was stirred for 8 h at 80° C., diluted with TBME, filtered and evaporated. The crude product was purified with flash chromatography, and the regioisomers were separated using reversed phase HPLC yielding 20 mg of 4-(ethyl(2-(pyridin-3-yl)-2,3,4,5-tetrahydropyridazin-4-yl)amino)-2-(trifluoromethyl)benzonitrile, 1H NMR (400 MHz, CDCl3): δ 1.27 (3H, t), 2.50-2.67 (2H, m), 3.35-3.50 (3H, m), 3.87-3.94 (1H, m), 4.39-4.47 (1H, m), 6.89 (1H, dd), 6.95 (1H, dd), 7.03 (1H, d), 7.21 (1H, q), 7.52 (1H, dq), 7.63 (1H, d), 8.20 (1H, dd), 8.49 (1H, d), and 41 mg of 4-(ethyl(1-(pyridin-3-yl)-1,4,5,6-tetrahydropyridazin-4-yl)amino)-2-(trifluoromethyl)benzonitrile, 1H NMR (400 MHz, CDCl3): δ 1.30 (3H, t), 2.26-2.35 (2H, m), 3.43-3.59 (2H, m), 3.65-3.76 (1H, m), 3.88-3.99 (1H, m), 4.47-4.56 (1H, m), 6.72 (1H, d), 6.87 (1H, dd), 7.02 (1H, d), 7.23 (1H, dd), 7.57 (1H, dq), 7.62 (1H, d), 8.21 (1H, dd), 8.53 (1H, d).
The compound was prepared from 3-chloro-2-methylcyclopent-2-enone (2.00 g, 15.3 mmol) prepared as in E. Mewshaw, Tetrahedron Lett., 1989, 30, 3753, 1H-imidazole (2.09 g, 30.6 mmol), TEA (10.7 ml, 7.75 g, 77 mmol) and KHCO3 (0.31 g, 3.1 mmol) in toluene (10 ml), 160° C., 1.5 h. Yield 1.89 g. 1H NMR (400 MHz, CDCl3): 2.03 (3H, t), 2.62-2.67 (2H, m), 2.99-3.04 (2H, m), 7.25 (1H, s), 7.41 (1H, s), 8.02 (1H, s).
To the compound of Example 8(a) (2.00 g, 12.3 mmol) in pyridine (3 ml) hydroxylamine HCl (1.71 g, 24.7 mmol) was added. The mixture was stirred overnight and diluted with water. The precipitate was filtered off and washed with water. Yield 1.79 g. 1H NMR (400 MHz, CDCl3): 2.00 (3H, t), 2.84-2.94 (4H, m), 7.19 (1H, s), 7.22 (1H, m), 7.29 (1H, broad s), 7.80 (1H, s).
The compound of Example 8(b) (0.75 g, 4.2 mmol) was dissolved in a mixture of EtOH (25 ml) and AcOH (25 ml) and cooled to 0° C. Zn dust (1.66 g, 25.4 mmol) was added in portions and the mixture was warmed to RT and stirred overnight. The mixture was filtered and evaporated. Water was added, pH was adjusted to 10 with NH4OH and the mixture was saturated with NaCl, extracted with THF, dried and evaporated yielding 0.10 g of the title compound which was used in the next step without further purification. m/z=163.9, (M+1)+.
The compound was prepared from the compound of Example 8(c) (0.10 g, 0.61 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.12 g, 0.61 mmol) and DIPEA (0.32 ml, 0.24 g, 1.8 mmol) in DMSO (4 ml), 120° C., 2 h. Yield 0.17 g. m/z=333.4, (M+1)+.
The compound was prepared from the compound of Example 8(d) (0.17 g, 0.51 mmol), 60% NaH dispersion (41 mg, 1.0 mmol) and iodoethane (0.061 ml, 0.12 g, 0.77 mmol) in DMF (4 ml). Yield 20 mg after reversed phase preparative HPLC. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.75 (3H, s), 1.92-2.03 (1H, m), 2.46-2.58 (1H, m), 2.78-2.99 (2H, m), 3.34-3.50 (2H, m), 4.92-5.02 (1H, m), 6.91 (1H, dd), 7.09 (1H, d), 7.13 (1H, s), 7.17 (1H, s), 7.60 (1H, d), 7.70 (1H, s).
4-(Ethyl(3-hydroxycyclohexyl)amino)-2-(trifluoromethyl) (1.75 g, 5.6 mmol) and TEA (1.17 ml, 0.85 g, 8.4 mmol) were dissolved in dry DCM (60 ml) and cooled to 0° C. Methanesulfonyl chloride (0.65 ml, 0.96 g, 8.4 mmol) was added dropwise. Stirring was continued for 1 h, and the mixture was warmed to RT and stirred for 4 h. The mixture was washed with saturated NH4Cl solution, water and brine, dried and evaporated. Yield 2.11 g. m/z=391.3, (M+1)+.
The compound of Example 9(a) (2.10 g, 5.4 mmol) and 15-Crown-5 (0.11 ml, 0.12 g, 0.54 mmol) were dissolved in DMF (30 ml). NaN3 (0.70 g, 10.8 mmol) was added and the mixture was stirred overnight at RT, followed by 12 h at 70° C. and overnight at RT. Water was added and the mixture was extracted with EtOAc. The combined organic phases were washed water and brine, dried and evaporated. Yield 1.67 g. m/z=338.5, (M+1)+.
The compound of Example 9(b) (1.65 g, 4.9 mmol) was dissolved in dry toluene (20 ml). 1-(Triphenylphosphoranylidene)propan-2-one (1.56 g, 4.9 mmol) was added and the mixture was refluxed for 17 h. After evaporation, the residue was purified by flash chromatography followed by separation of diastereomers by reverse phase preparative HPLC yielding 190 mg of cis-diastereomer, 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.56-1.72 (2H, m), 1.94-2.23 (5H, m), 2.34 (3H, s), 2.39-2.50 (1H, m), 3.45 (2H, q), 3.81-3.93 (1H, m), 4.20-4.33 (1H, m), 6.82 (1H, dd), 6.96 (1H, d), 7.45 (1H, s), 7.58 (1H, d) and 50 mg of trans-diastereomer, 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.67-2.01 (6H, m), 2.03-2.12 (1H, m), 2.25-2.30 (1H, m), 2.32 (3H, s), 3.29-3.52 (2H, m), 4.72-4.79 (1H, m), 5.01-5.13 (1H, m), 7.02 (1H, dd), 7.13 (1H, d), 7.51 (1H, s), 7.56 (1H, d).
4-((3-Aminocyclohexyl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile HCl (1.00 g, 2.9 mmol), NaN3 (0.22 g, 3.5 mmol) and triethyl orthoformate (0.62 ml, 0.55 g, 3.7 mmol) were mixed in AcOH (5 ml) and stirred for 7 h at 100° C. Water was added and the mixture was extracted with EtOAc. Combined organic phases were washed with water and brine, dried and evaporated. The residue was purified by flash chromatography and diastereomers were separated using reversed phase preparative HPLC yielding 4 mg of trans-diastereomer, 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.60-1.82 (2H, m), 1.87-2.10 (4H, m), 2.16-2.26 (1H, m), 2.52-2.62 (1H, m), 3.34-3.52 (2H, m), 4.98-5.06 (1H, m), 6.93 (1H, dd), 7.10 (1H, d), 7.60 (1H, d), 8.67 (1H, s), and 36 mg of cis-diastereomer, 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.60-1.75 (2H, m), 1.86-2.05 (2H, m), 2.11-2.22 (2H, m), 2.29-2.37 (1H, m), 2.39-2.47 (1H, m), 3.45 (2H, q), 3.89-4.00 (1H, m), 4.69-4.79 (1H, m), 6.85 (1H, dd), 6.97 (1H, d), 7.58 (1H, d), 8.69 (1H, s).
The compound of Example 9(a) (2.39 g, 6.1 mmol) was dissolved in DMF (40 ml). NaN3 (0.90 g, 18.4 mmol) and 15-Crown-5 (0.12 ml, 0.14 g, 0.61 mmol) were added, and the mixture heated for 20 h at 100° C. Water was added and the mixture was extracted with EtOAc. The combined organic phases were washed with water and brine, dried and evaporated. Yield 1.96 g. m/z=322.3, (M+1)+.
The compound of Example 11(a) (1.96 g, 6.1 mmol) was dissolved in toluene (50 ml). NaN3 (1.19 g, 18.3 mmol) and triethylamine HCl (2.52 g, 18.3 mmol) were added. The mixture was heated for 29 h at 100° C. The mixture was extracted with water and the pH of the combined aqueous phases was adjusted to 1.5 with 2 M HCl. The acidic aqueous mixture was extracted with DCM. Combined organic phases were washed with saturated NH4Cl solution and brine, dried and evaporated. The residue was dissolved in dilute NaHCO3 solution and washed with EtOAc. After acidification the aqueous phase was extracted with DCM, the combined organic phases were washed with saturated NH4Cl solution, dried and evaporated yielding 0.47 g of the title compound which was used in the next step without further purification. m/z=365.3, (M+1)+.
The compound of Example 11 (b) (0.45 g, 1.2 mmol) was dissolved in ACN (10 ml). K2CO3 (0.34 g, 2.5 mmol) was added and the mixture stirred for 10 min. Iodomethane (0.12 ml, 0.26 g, 1.9 mmol) was added and the mixture was stirred overnight. Water was added and the mixture was extracted with DCM. Combined organic phases were washed with water and brine, dried and evaporated. The residue was purified using reversed phase preparative HPLC yielding 9 mg of cis-diastereomer, 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.56-1.76 (3H, m), 1.95-2.05 (2H, m), 2.07-2.17 (3H, m), 2.98-3.09 (1H, m), 3.44 (2H, q), 3.81-3.91 (1H, m), 4.05 (3H, s), 6.81 (1H, dd), 6.95 (1H, d), 7.57 (1H, d), and 38 mg of trans-diastereomer of the first title compound, H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.50-1.91 (6H, m), 1.97-2.04 (1H, m), 2.10-2.18 (1H, m), 3.30-3.52 (2H, m), 3.53-3.59 (1H, m), 4.02 (3H, s), 4.91-5.02 (1H, s), 7.15 (1H, dd), 7.32 (1H, d), 7.57 (1H, d), and 10 mg of cis-diastereomer, 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.51-1.68 (3H, m), 1.81-1.98 (2H, m), 2.03-2.12 (1H, m), 2.14-2.27 (2H, m), 3.11-3.21 (1H, m), 3.42 (2H, q), 3.80-3.90 (1H, m), 4.31 (3H, s), 6.81 (1H, dd), 6.96 (1H, d), 7.57 (1H, d), and 41 mg of trans-diastereomer of the second title compound, 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.37-1.51 (1H, m), 1.62-1.95 (5H, m), 2.23-2.40 (2H, m), 3.31-3.54 (2H, m), 3.59-3.67 (1H, m), 4.25-4.35 (1H, m), 4.38 (3H, s), 6.92 (1H, dd), 7.28 (1H, d), 7.56 (1H, d).
The compound was from 3-(1H-imidazol-1-yl)cyclohexanamine (0.53 g, 3.2 mmol), 2,4,6-trifluorobenzonitrile (0.50 g, 3.2 mmol) and DIPEA (1.66 ml, 1.23 g, 9.5 mmol) in DMSO (13 ml), 100° C., 2 h. Yield 88 mg. m/z=303.5, (M+1)+.
The compound was prepared from the compound of Example 12(a) (0.16 g, 0.53 mmol), 60% NaH dispersion (57 mg, 1.4 mmol) and iodoethane (0.078 ml, 0.15 g, 0.98 mmol) in DMF (4 ml), yielding, after separation of diastereomers using reversed phase preparative HPLC, 11 mg of trans-diastereomer, 1H NMR (400 MHz, CDCl3): 1.00 (3H, t), 1.62-1.75 (2H, m), 1.78-1.94 (3H, m), 1.99-2.10 (2H, m), 2.13-2.22 (1H, m), 3.35 (2H, q), 3.73-3.80 (1H, m), 4.41-4.50 (1H, m), 6.59-6.69 (2H, m), 6.97 (1H, s), 7.06 (1H, s), 7.56 (1H, s), and 28 mg of cis-diastereomer, 1H NMR (400 MHz, CDCl3): 1.12 (3H, t), 1.47-1.68 (3H, m), 1.82-1.91 (1H, m), 1.97-2.06 (2H, m), 2.11-2.20 (1H, m), 2.33-2.41 (1H, m), 3.23-3.37 (2H, m), 3.86-3.96 (1H, m), 4.06-4.16 (1H, m), 6.36-6.46 (2H, m), 6.98 (1H, s), 7.05 (1H, s), 7.57 (1H, s).
Acetyl chloride (0.67 ml, 0.74 g, 9.4 mmol) was added to MeOH (5 ml) and stirred for 1 h. tert-Butyl-3-(1H-imidazol-1-yl)cyclohexylcarbamate (cis-enantiomer 1) (0.25 g, 0.94 mmol) dissolved in MeOH (5 ml) was added, and the resulting solution was stirred overnight and evaporated. Yield 0.22 g (cis-enantiomer 1). m/z=166.2, (M+1)+.
A mixture of the compound of Example 13(a), cis-enantiomer 1, (0.22 g, 0.92 mmol), 2-chloro-4-fluoro-3-methylbenzonitrile (0.16 g, 0.92 mmol) and Cs2CO3 (0.90 g, 2.8 mmol) in DMSO (4 ml) was heated for 3 h at 140° C. Water was added and the mixture was extracted with EtOAc. The combined organic phases were washed with water and brine, dried and evaporated. The residue was purified by flash chromatography. Yield 60 mg (cis-enantiomer 1). m/z=315.6, (M+1)+.
The title compound was prepared from the compound of Example 13(b), cis-enantiomer 1, (60 mg, 0.19 mmol), 60% NaH dispersion (23 mg, 0.58 mmol) and iodoethane (0.033 ml, 64 mg, 0.41 mmol) in DMF (3 ml), yielding 15 mg of the title compound (cis-enantiomer 1). 1H NMR (400 MHz, CDCl3): 0.92 (3H, t), 1.24-1.64 (3H, m), 1.74-1.84 (1H, m), 1.88-2.14 (3H, m), 2.17-2.24 (1H, m), 2.37 (3H, s), 2.84-2.96 (1H, m), 3.08-3.22 (2H, m), 3.86-3.98 (1H, m), 6.94 (1H, broad s), 7.00-7.09 (2H, m), 7.46 (1H, d), 7.52 (1H, broad s).
The title compound was prepared as in Example 13(a) using tert-butyl 3-(1H-imidazol-1-yl)cyclohexylcarbamate (cis-enantiomer 2) (0.16 g, 0.60 mmol) yielding 0.14 g of the title compound (cis-enantiomer 2). m/z=166.1, (M+1)+.
A mixture of 2-chloro-4-iodo-3-methyl benzonitrile (0.16 g, 0.59 mmol), the compound of Example 14(a), cis-enantiomer 2, (0.14 g, 0.59 mmol) and Cs2CO3 (0.77 g, 2.4 mmol) in DMF (8 ml) was bubbled with N2. X-Phos (71 mg, 0.15 mmol) and Pd2(dba)3 (53 mg, 0.06 mmol) were added. The mixture was heated for 21 h at 90° C. NH4Cl solution and water were added, and the mixture was extracted with EtOAc. The combined organic phases were washed with water and brine, dried and evaporated. The residue was purified using flash chromatography yielding 20 mg of the title compound (cis-enantiomer 2). m/z=315.3, (M+1)+.
The compound was prepared from the compound of Example 14(b), cis-enantiomer 2, (20 mg, 0.06 mmol), 60% NaH dispersion (10 mg, 0.25 mmol) and iodoethane (0.020 ml, 40 mg, 0.25 mmol) in DMF (2 ml), yielding 5 mg of the title compound (cis-enantiomer 2). 1H NMR (400 MHz, CDCl3): 0.92 (3H, t), 1.24-1.64 (3H, m), 1.74-1.84 (1H, m), 1.88-2.14 (3H, m), 2.17-2.24 (1H, m), 2.37 (3H, s), 2.84-2.96 (1H, m), 3.08-3.22 (2H, m), 3.86-3.98 (1H, m), 6.94 (1H, broad s), 7.00-7.09 (2H, m), 7.46 (1H, d), 7.52 (1H, broad s).
1,2,4-Triazole sodium salt (0.80 g, 8.8 mmol) was dissolved in DMF (10 ml). 3-Chloro-6,6-dimethylcyclohex-2-enone (1.00 g, 6.3 mmol) was added. The mixture was stirred for 2.5 h at 90° C. Water was added and the mixture was extracted with EtOAc. The combined organic phases were washed with water and brine, dried and evaporated. Yield 1.20 g. m/z=192.5, (M+1)+.
The compound was prepared from the compound of Example 15(a) (1.08 g, 5.7 mmol), CeCl3.7H2O (2.32 g, 6.2 mmol) and NaBH4 (0.26 g, 6.8 mmol) in MeOH (15 ml). Yield 0.96 g. m/z=194.5, (M+1)+.
The compound was prepared from the compound of Example 15(b) (0.95 g, 4.9 mmol), DPPA (1.59 ml, 2.03 g, 7.4 mmol) and DBU (1.18 ml, 1.20 g, 7.9 mmol) in a mixture of toluene (20 ml) and THF (20 ml). Yield 0.90 g. m/z=219.6, (M+1)+.
The compound was prepared from the compound of Example 15(c) (0.89 g, 4.1 mmol) and PPh3 (2.14 g, 8.2 mmol) in MeOH (25 ml). Yield 0.55 g. m/z=193.2, (M+1)+.
The compound was prepared from the compound of Example 15(d) (0.54 g, 2.8 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.53 g, 2.8 mmol) and DIPEA (1.22 ml, 0.91 g, 7.0 mmol) in DMSO (9 ml), 4.5 h, 120° C. Yield 0.63 g. m/z=362.7, (M+1)+.
The compound was prepared from the compound of Example 15(e) (0.62 g, 1.7 mmol), 60% NaH dispersion (0.14 g, 3.4 mmol) and iodoethane (0.27 ml, 0.54 g, 3.4 mmol) in DMF (10 ml), yielding 0.51 g of the title compound as a racemic mixture. Enantiomers were separated using preparative HPLC (Daicel Chiralpack AD, 4.8 cm×27 cm, 80% heptane—20% EtOH, 220 ml/min, run time 15 min) from 300 mg of racemic mixture, yielding 133 mg of enantiomer 1 (rt 5.6 min) and 122 mg of enantiomer 2 (rt 8.8 min). 1H NMR (400 MHz, CDCl3): 0.99 (3H, s), 1.11 (3H, s), 1.16-1.23 (2H, m), 2.59-2.69 (1H, m), 2.73-2.83 (1H, m), 3.44-3.54 (2H, m), 4.49-4.57 (1H, m), 6.22-6.26 (1H, m), 6.93 (1H, dd), 7.09 (1H, d), 7.60 (1H, d), 8.01 (1H, s), 8.31 (1H, s).
The compound was prepared from the compound of Example 15(e) (0.52 g, 1.4 mmol), 60% NaH dispersion (0.12 g, 2.9 mmol) and iodomethane (0.18 ml, 0.41 g, 2.9 mmol) in DMF (8 ml), yielding 0.35 g of the title compound as a racemic mixture. Enantiomers were separated using preparative HPLC (Daicel Chiralpack IA, 2 cm×25 cm, 95% TBME+0.2% DEA−5% EtOH+0.2% DEA, 20 ml/min, run time 30 min) yielding 115 mg of enantiomer 1 (rt 15 min) and 78 mg of enantiomer 2 (rt 20 min). 1H NMR (400 MHz, CDCl3): 0.99 (3H, s), 1.12 (3H, s), 1.75-1.88 (2H, m), 2.58-2.69 (1H, m), 2.75-2.85 (1H, m), 2.99 (3H, s), 4.55-4.61 (1H, m), 6.12-6.17 (1H, m), 6.95 (1H, dd), 7.09 (1H, d), 7.61 (1H, d), 8.00 (1H, s), 8.33 (1H, s).
(S)-4-(ethyl(pyrrolidin-3-yl)amino)-2-(trifluoromethyl)benzonitrile hydrochloride (0.40 g, 1.3 mmol) and 2,4-dichloropyrimidine (0.24 g, 1.6 mmol) were dissolved in MeOH (6 ml). DIPEA (0.76 ml, 0.57 g, 4.4 mmol) was added, and the mixture was stirred for 3 h at RT. Silica was added and the solution was evaporated. Purification by flash chromatography yielded 0.22 g of the title compound. m/z=396.7, (M+1)+.
The compound of Example 17(a) (0.22 g, 0.56 mmol) and anhydrous NaOAc (91 mg, 1.1 mmol) were dissolved in EtOH (15 ml). 10% Pd/C (0.12 g) was added, and the mixture was hydrogenated at atmospheric pressure for 6 h. The catalyst was filtered off and the solvent was evaporated. The residue was dissolved in EtOAc and washed with water and brine, dried and evaporated. Yield 0.15 g. 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 2.22-2.32 (1H, m), 2.37-2.46 (1H, m), 3.38-3.61 (4H, m), 3.76 (1H, broad s), 3.91 (1H, broad s), 4.52-4.64 (1H, m), 6.34 (1H, d), 6.90 (1H, dd), 7.05 (1H, d), 7.63 (1H, d), 8.24 (1H, d), 8.64 (1H, s).
The compound of Example 15(f), racemic, (0.15 g, 0.39 mmol) was dissolved in MeOH (10 ml) and hydrogenated (10% Pd/C, RT, 10 bar) in H-Cube yielding 26 mg of the title compound (cis-diastereomer). 1H NMR (400 MHz, CDCl3): 0.97 (3H, s), 1.14 (3H, t), 1.18 (3H, s), 1.54-1.75 (2H, m), 1.99-2.19 (3H, m), 2.45-2.54 (1H, m), 3.46 (2H, q), 3.87-3.93 (1H, m), 4.36-4.46 (1H, m), 6.93 (1H, dd), 7.09 (1H, d), 7.58 (1H, d), 7.98 (1H, s), 8.16 (1H, s).
The compound was prepared from cis-diastereomer of methyl 3-aminocyclohexanecarboxylate (1.00 g, 6.4 mmol) (WO 2011/110612), 4-fluoro-2-(trifluoromethyl)benzonitrile (1.20 g, 6.4 mmol) and DIPEA (2.77 ml, 2.06 g, 15.9 mmol) in DMSO (15 ml), 3 h, 100° C., yielding 1.01 g of the title compound (cis-diastereomer). m/z=327.4, (M+1)+.
The compound of Example 19(a), cis-diastereomer, (1.00 g, 3.1 mmol) was dissolved in 1-BuOH (10 ml) and hydrazine monohydrate (0.75 ml, 0.77 g, 15.3 mmol) was added. The mixture was heated for 12 h at 130° C. Water was added and the mixture was extracted with EtOAc, washed with water and brine, dried and evaporated yielding 0.88 g of the title compound (cis-diastereomer). m/z=327.4, (M+1)+.
A mixture of the compound of Example 19(b), cis-diastereomer, (0.88 g, 2.7 mmol) and triethyl orthoformate (3.59 ml, 3.20 g, 21.6 mmol) was heated for 3 h at 160° C. After evaporation, the residue was triturated with 1:1 heptane/Et2O and Et2O yielding 0.50 g of the title compound (cis-diastereomer). m/z=337.3, (M+1)+.
The compound was prepared from the compound of Example 19(c), cis-diastereomer, (0.50 g, 1.5 mmol), 60% NaH dispersion (0.12 g, 3.0 mmol) and iodoethane (0.24 ml, 0.46 g, 3.0 mmol) in DMF (10 ml), 4 h, yielding 0.22 g of the title compound (cis-diastereomer). Enantiomers were separated using preparative HPLC (Daicel Chiralpack IA, 2 cm×25 cm, 97% TBME+0.2% DEA−3% THF+0.2% DEA, 20 ml/min, run time 35 min) yielding 87 mg of cis-enantiomer 1 (rt 14 min) and 86 mg of cis-enantiomer 2 (rt 19 min). 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.53-1.68 (5H, m), 1.84-2.16 (3H, m), 2.19-2.34 (2H, m), 3.09-3.20 (1H, m), 3.42 (2H, q), 3.78-3.89 (1H, m), 6.81 (1H, dd), 6.96 (1H, d), 7.59 (1H, d), 8.35 (1H, s).
The compound of Example 19, cis-diastereomer, (0.15 g, 0.41 mmol), isopropylamine (0.11 ml, 73 mg, 1.2 mmol) and pyridinium acetate (0.46 g, 3.3 mmol) were microwave heated for 12 h at 110° C. The mixture was diluted with DCM and washed with water and brine, dried and evaporated. The residue was purified using flash chromatography yielding 17 mg of the title compound (cis-diastereomer). 1H NMR (400 MHz, CDCl3): 1.21 (3H, t), 1.48-1.57 (6H, m), 1.56-2.12 (8H, m), 2.81-2.92 (1H, m), 3.44 (2H, q), 3.77-3.87 (1H, m), 4.29-4.40 (1H, m), 6.81 (1H, dd), 6.95 (1H, d), 7.57 (1H, d), 8.17 (1H, s).
Compound of Example 96(e) (150.71 g, 788 mmol) dissolved in 950 ml of methanol was heated to 60° C. D-(−)-tartaric acid (118 g, 788 mmol) in 320 ml of methanol was added at 60-65° C. Thereafter the solution was slowly cooled to 45° C. and stirring was continued at 45° C. for 30 min. Then the mixture was slowly cooled to RT. Stirring was continued at RT for 2.5 h. The precipitate was filtered off at RT, washed with ice-cold methanol (2×100 ml) and dried overnight at 40° C. under vacuum. Yield 127.66 g, HPLC optical purity 80.4%. The precipitate was dissolved in the mixture of methanol (2067 ml) and water (10 ml) at 65° C. Hot solution was allowed to cool slowly to RT overnight. Then the precipitate was filtered off at RT, washed with ice-cold methanol and dried at 40° C. under vacuum overnight to give the title compound (enantiomer 1) as a salt of D-(−)-tartaric acid. Yield 73.90 g, HPLC optical purity 94.8%. The salt was dissolved in water. The solution was made basic (pH >9) with aqueous NaOH and extracted with DCM (4×). The combined organic phases were washed with water and brine, dried, filtered and evaporated to obtain the enantiomer 1 as a free base. 1H NMR (400 MHz, CDCl3): δ 0.91 (3H, s), 1.03 (3H, s), 1.52-1.62 (1H, m), 1.67-1.75 (1H, m), 2.45 (1H, m), 3.19 (1H, m), 5.70 (1H, m), 7.07 (1H, s), 7.13 (1H, s), 7.70 (1H, s).
The compound was prepared from the compound of Example 21(a), enantiomer 1, (0.30 g, 1.6 mmol), 2-chloro-4-fluorobenzonitrile (0.25 g, 1.6 mmol) and DIPEA (0.69 ml, 0.51 g, 4.0 mmol) in DMSO (4 ml), 5 h, 100° C. Yield 0.19 g. m/z=327.3, (M+1)+.
The compound was prepared from the compound of Example 21(b), enantiomer 1, (0.13 g, 0.40 mmol), 60% NaH dispersion (47 mg, 1.2 mmol) and iodoethane (0.084 ml, 0.16 g, 1.1 mmol) in DMF (4 ml), yielding 81 mg of the title compound (enantiomer 1). 1H NMR (400 MHz, CDCl3): 0.97 (3H, s), 1.10 (3H, s), 1.18 (3H, t), 1.66-1.83 (2H, m), 2.49-2.69 (2H, m), 3.43 (2H, q), 4.39-4.46 (1H, m), 5.70 (1H, d), 6.70 (1H, dd), 6.83 (1H, d), 7.13 (1H, s), 7.16 (1H, s), 7.44 (1H, d), 7.76 (1H, s).
The compound was prepared from the compound of Example 21(b), enantiomer 1, (60 mg, 0.18 mmol), 60% NaH dispersion (30 mg, 0.75 mmol) and iodomethane (0.024 ml, 55 mg, 0.39 mmol) in DMF (2 ml). Yield 47 mg. 1H NMR (400 MHz, CDCl3): 0.96 (3H, s), 1.10 (3H, s), 1.69-1.84 (2H, m), 2.50-2.70 (2H, m), 2.93 (3H, s), 4.45-4.51 (1H, m), 5.62 (1H, d), 6.73 (1H, dd), 6.83 (1H, d), 7.13 (1H, s), 7.17 (1H, s), 7.44 (1H, d), 7.76 (1H, s).
A mixture of 3-chloro-6,6-dimethylcyclohex-2-enone (5.00 g, 31.5 mmol), 1H-1,2,3-triazole (4.35 g, 63.0 mmol) and TEA (16 g, 22 ml, 158 mmol) in toluene (30 ml) was stirred for 5 h at 80° C. The mixture was diluted with DCM and washed with water and brine, dried, and evaporated. The regioisomers were separated using flash chromatography yielding 0.75 g of 6,6-dimethyl-3-(1H-1,2,3-triazol-1-yl)cyclohex-2-enone, m/z=192.2, (M+1)+, and 1.04 g of 6,6-dimethyl-3-(2H-1,2,3-triazol-2-yl)cyclohex-2-enone. m/z=192.2, (M+1)+.
The compound was prepared from 6,6-dimethyl-3-(1H-1,2,3-triazol-1-yl)cyclohex-2-enone (0.74 g, 3.9 mmol), CeCl3.7H2O (1.59 g, 4.3 mmol) and NaBH4 (0.18 g, 4.6 mmol) in MeOH (30 ml). Yield 0.73 g. m/z=194.2, (M+1)+.
The compound was prepared from the compound of Example 23(b) (0.72 g, 3.7 mmol), DPPA (1.33 g, 1.04 ml, 4.8 mmol) and DBU (0.85 g, 0.84 ml, 5.6 mmol) in toluene (15 ml) and THF (5 ml) yielding 1.13 g of impure title compound which was used in the next step without purification. m/z=219.6, (M+1)+.
The compound was prepared from the compound of Example 23(c) (1.10 g) and PPh3 (1.95 g, 7.4 mmol) in MeOH (20 ml). Yield 0.46 g. m/z=193.2, (M+1)+.
The compound was prepared from the compound of Example 23(d) (0.46 g, 2.4 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.45 g, 2.4 mmol) and DIPEA (0.77 g, 1.04 ml, 6.0 mmol) in DMSO (4 ml). Yield 0.47 g. m/z=362.7, (M+1)+.
The compound was prepared from the compound of Example 23(e) (0.24 g, 0.65 mmol), 60% NaH dispersion (0.052 g, 1.3 mmol) and iodoethane (0.20 g, 0.11 ml, 1.3 mmol) in DMF (4 ml) yielding 0.18 g of the title compound as a racemic mixture. Enantiomers were separated using preparative HPLC (Daicel Chiralpack IA, 2 cm×25 cm, 95% TBME+0.2% DEA−5% THF+0.2% DEA, 20 ml/min, run time 30 min) yielding enantiomer 1 (rt 9 min) and enantiomer 2 (rt 15 min). 1H NMR (400 MHz, CDCl3): δ 1.01 (3H, s), 1.13 (3H, s), 1.21 (3H, t), 1.73-1.87 (2H, m), 2.68-2.80 (1H, m), 2.87-2.98 (1H, m), 3.45-3.56 (2H, m), 4.52-4.59 (1H, m), 6.19-6.25 (1H, m), 6.95 (1H, dd), 7.10 (1H, d), 7.59 (1H, d), 7.77 (1H, d), 7.82 (1H, d).
The compound was prepared from the compound of Example 23(e) (0.24 g, 0.65 mmol), 60% NaH dispersion (0.052 g, 1.3 mmol) and iodomethane (0.19 g, 0.081 ml, 1.3 mmol) in DMF (4 ml) yielding 0.22 g of the title compound as a racemic mixture. Enantiomers were separated using preparative HPLC (Daicel Chiralpack IA, 2 cm×25 cm, 97% TBME+0.2% DEA−3% EtOH+0.2% DEA, 20 ml/min, run time 15 min) yielding 78 mg of enantiomer 1 (rt 10 min) and 77 mg of enantiomer 2 (rt 13 min). 1H NMR (400 MHz, CDCl3): 1.01 (3H, s), 1.13 (3H, s), 1.76-1.90 (2H, m), 2.70-2.80 (1H, m), 2.89-2.99 (1H, m), 3.00 (3H, s), 4.58-4.64 (1H, m), 6.10-6.15 (1H, m), 6.96 (1H, dd), 7.10 (1H, d), 7.61 (1H, d), 7.77 (1H, d), 7.81 (1H, d).
The compound was prepared 6,6-dimethyl-3-(2H-1,2,3-triazol-1-yl)cyclohex-2-enone of Example 23(a) (1.85 g, 9.7 mmol), CeCl3.7H2O (3.96 g, 10.6 mmol) and NaBH4 (0.44 g, 11.6 mmol) in MeOH (80 ml). Yield 1.87 g. m/z=194.2, (M+1)+.
The compound was prepared from the compound of Example 25(a) (1.87 g, 9.7 mmol), DPPA (3.46 g, 2.71 ml, 12.6 mmol) and DBU (2.21 g, 2.17 ml, 14.5 mmol) in toluene (30 ml) yielding 2.91 g of crude title compound which was used in the next step without purification. m/z=219.2, (M+1).
The compound was prepared from the compound of Example 25(b) (2.90 g) and PPh3 (5.05 g, 19.2 mmol) in MeOH (50 ml). Yield 1.18 g. m/z=193.2, (M+1)+.
The compound was prepared from the compound of Example 25(c) (1.17 g, 6.1 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (1.15 g, 6.1 mmol) and DIPEA (1.97 g, 2.65 ml, 15.2 mmol) in DMSO (10 ml). Yield 0.90 g. m/z=362.3, (M+1)+.
The compound was prepared from the compound of Example 25(d) (0.45 g, 1.2 mmol), 60% NaH dispersion (0.10 g, 2.5 mmol) and iodoethane (0.39 g, 0.20 ml, 2.5 mmol) in DMF (8 ml) yielding 0.37 g of the title compound as a racemic mixture. Enantiomers were separated using preparative HPLC (Daicel Chiralpack IA, 2 cm×25 cm, 90% hexane+0.2% DEA−10% EtOH+0.2% DEA, 20 ml/min, run time 30 min) yielding enantiomer 1 (0.15 g, rt 8 min) and enantiomer 2 (0.16 g, rt 13 min). H NMR (400 MHz, CDCl3): 0.99 (3H, s), 1.11 (3H, s), 1.20 (3H, t), 1.68-1.86 (2H, m), 2.75-2.87 (1H, m), 2.93-3.03 (1H, m), 3.42-3.60 (2H, m), 4.50-4.60 (1H, m), 6.45-6.50 (1H, m), 6.93 (1H, dd), 7.10 (1H, d), 7.59 (1H, d), 7.72 (2H, s).
The compound was prepared from the compound of Example 25(d) (0.45 g, 1.2 mmol), 60% NaH dispersion (0.10 g, 2.5 mmol) and iodomethane (0.35 g, 0.16 ml, 2.5 mmol) in DMF (8 ml) yielding 0.34 g of the title compound as a racemic mixture. Enantiomers were separated using preparative HPLC (Daicel Chiralpack IA, 2 cm×25 cm, 80% hexane+0.2% DEA−20% EtOH+0.2% DEA, 20 ml/min, run time 25 min) yielding 0.14 g of enantiomer 1 (rt 13 min) and 0.14 g of enantiomer 2 (rt 16 min). 1H NMR (400 MHz, CDCl3): 0.99 (3H, s), 1.12 (3H, s), 1.72-1.88 (2H, m), 2.79-2.89 (1H, m), 2.93-3.03 (1H, m), 3.00 (3H, s), 4.58-4.64 (1H, m), 6.36-6.41 (1H, m), 6.96 (1H, dd), 7.10 (1H, d), 7.60 (1H, d), 7.73 (2H, s).
The compound was prepared from 3-(1H-imidazol-1-yl)-6,6-dimethylcyclohex-2-enamine (0.30 g, 1.6 mmol), 4-fluoro-2-methyl-1-nitrobenzene (0.24 g, 1.6 mmol) and DIPEA (0.51 g, 0.68 ml, 3.9 mmol) in DMSO (5 ml). Yield 0.065 g. m/z=327.3, (M+1)+.
The compound was prepared from the compound of Example 27(a) (0.065 g, 0.20 mmol), 60% NaH dispersion (16 mg, 0.4 mmol) and iodomethane (0.057 g, 0.025 ml, 0.4 mmol) in DMF (2 ml). Yield 24 mg. 1H NMR (400 MHz, CDCl3): 0.97 (3H, s), 1.11 (3H, s), 1.69-1.85 (2H, m), 2.50-2.72 (2H, m), 2.67 (3H, s), 2.97 (3H, s), 4.55-4.61 (1H, m), 5.63-5.67 (1H, m), 6.58 (1H, d), 6.69 (1H, dd), 7.16 (1H, broad s), 7.22 (1H, broad s), 7.79 (1H, broad s), 8.12 (1H, dd).
The compound was prepared from 3-(1H-imidazol-1-yl)-6,6-dimethylcyclohex-2-enamine (0.30 g, 1.6 mmol), 4-bromo-2-fluorobenzonitrile (0.31 g, 1.6 mmol), sodium tert-butoxide (0.21 g, 2.2 mmol), Pd2(dba)3 (0.072 g, 0.08 mmol) and rac-BINAP (0.098 g, 0.16 mmol) in toluene (10 ml). Yield 0.15 g. m/z=311.3, (M+1)+.
The compound was prepared from the compound of Example 28(a) (0.15 g, 0.48 mmol), iodomethane (0.14 g, 0.06 ml, 0.97 mmol) in DMF (3 ml) and 60% NaH dispersion (39 mg, 0.97 mmol). Yield 14 mg. 1H NMR (400 MHz, CDCl3): 0.97 (3H, s), 1.10 (3H, s), 1.68-1.85 (2H, m), 2.49-2.71 (2H, m), 2.92 (3H, s), 4.43-4.48 (1H, m), 5.62-5.66 (1H, m), 6.52 (1H, dd), 6.61 (1H, dd), 7.14 (1H, broad s), 7.17 (1H, broad s), 7.37-7.43 (1H, m), 7.81 (1H, broad s).
The compound was prepared from the compound of Example 96(f), enantiomer 1, (0.16 g, 0.44 mmol), 60% NaH dispersion (36 mg, 0.89 mmol) and acetyl chloride (0.070 g, 0.063 ml, 0.89 mmol) in DMF (2 ml), yielding, after purification using reversed phase preparative HPLC, 5 mg of the title compound, enantiomer 1. 1H NMR (400 MHz, CDCl3): 1.09 (3H, s), 1.14 (3H, s), 1.23-1.44 (2H, m), 1.88 (3H, s), 2.15-2.26 (1H, m), 2.34-2.46 (1H, m), 5.31-5.65 (1H, m), 5.76-5.83 (1H, m), 7.08 (1H, broad s), 7.14 (1H, broad s), 7.57 (1H, d), 7.66 (1H, s), 7.69 (1H, broad s), 7.88 (1H, d).
The compound was prepared from 3-(1H-imidazol-1-yl)-6,6-dimethylcyclohex-2-enamine (0.44 g, 2.3 mmol), 2-(difluoromethyl)-4-fluorobenzonitrile (0.36 g, 2.3 mmol) and DIPEA (0.82 g, 1.10 ml, 6.3 mmol) in DMSO (8 ml). Yield 0.24 g. m/z=343.3, (M+1)+.
The compound was prepared from the compound of Example 30(a) (0.24 g, 0.70 mmol), 60% NaH dispersion (42 mg, 1.1 mmol) and iodomethane (0.12 g, 0.052 ml, 0.84 mmol) in DMF (4 ml) yielding, after purification using reversed phase preparative HPLC, 12 mg of the title compound. 1H NMR (400 MHz, CDCl3): 0.97 (3H, s), 1.11 (3H, s), 1.70-1.85 (2H, m), 2.50-2.73 (2H, m), 2.97 (3H, s), 4.54-4.59 (1H, m), 5.62-5.66 (1H, m), 6.87 (1H, t), 6.90 (1H, dd), 7.08 (1H, d), 7.13 (1H, s), 7.17 (1H, s), 7.55 (1H, d), 7.76 (1H, s).
The compound was prepared from the compound of Example 30(a) (0.36 g, 1.0 mmol), 60% NaH dispersion (62 mg, 1.6 mmol) and iodoethane (0.19 g, 0.10 ml, 1.2 mmol) in DMF (5 ml) yielding 60 mg of the title compound after purification using reversed phase HPLC as a racemic mixture. Enantiomers were separated using preparative HPLC (Daicel Chiralpack IA, 2 cm×25 cm, 95% TMBE+0.2% DEA−5% THF+0.2% DEA, 20 ml/min, run time 50 min) yielding 26 mg of enantiomer 1 (rt 22 min) and 25 mg of enantiomer 2 (rt 39 min). 1H NMR (400 MHz, CDCl3): 0.98 (3H, s), 1.11 (3H, s), 1.19 (3H, t), 1.67-1.76 (1H, m), 1.77-1.86 (1H, m), 2.51-2.71 (2H, m), 3.42-3.55 (2H, m), 4.47-4.55 (1H, m), 5.69-5.74 (1H, m), 6.85 (1H, t), 6.89 (1H, dd), 7.08 (1H, d), 7.13 (1H, s), 7.18 (1H, s), 7.53 (1H, d), 7.76 (1H, s).
The compound of Example 19(d) (0.22 g, 0.60 mmol), 1-amino-2-methylpropan-2-ol (0.16 g, 1.8 mmol) and pyridinium acetate (0.67 g, 4.8 mmol) were microwave heated for 12 h at 110° C. The mixture was diluted with DCM and washed with water and brine, dried and evaporated. The residue was purified using reversed phase preparative HPLC yielding 18 mg of the title compound (cis-diastereomer). 1H NMR (400 MHz, CDCl3): 1.20 (3H, t), 1.29 (3H, s), 1.30 (3H, s), 1.50-2.14 (9H, m), 2.95-3.15 (1H, m), 3.35-3.47 (2H, m), 3.70-3.84 (2H, m), 3.86-3.91 (1H, m), 6.79 (1H, dd), 6.93 (1H, d), 7.55 (1H, d), 8.14 (1H, s).
The compound was prepared from the compound of Example 19(c) (0.75 g, 2.2 mmol), 60% NaH dispersion (0.18 g, 4.5 mmol) and iodomethane (0.48 g, 0.21 ml, 3.4 mmol) in DMF (15 ml) yielding 0.21 g of the title compound (cis-diastereomer). 1H NMR (400 MHz, CDCl3): 1.51-1.70 (3H, m), 1.86-1.99 (2H, m), 2.07-2.14 (1H, m), 2.20-2.29 (2H, m), 2.93 (3H, s), 3.11-3.21 (1H, m), 3.79-3.90 (1H, m), 6.85 (1H, dd), 6.99 (1H, d), 7.60 (1H, d), 8.35 (1H, s).
The compound was prepared from 2,2-dimethyl-2H-pyran-3,5(4H,6H)-dione (2.00 g, 14.1 mmol) and oxalyl chloride (2.32 g, 1.55 ml, 18.3 mmol) in DCM (30 ml). Yield 1.82 g. 1H NMR (400 MHz, CDCl3): 1.37 (6H, s), 4.43 (2H, s), 6.23 (1H, s).
The compound was prepared from the compound of Example 34(a) (1.80 g, 11.2 mmol), 1H-imidazole (1.53 g, 22.4 mmol), TEA (3.40 g, 4.69 ml, 33.6 mmol) and KHCO3 (0.22 g, 2.2 mmol) in toluene (12 ml). Yield 1.35 g. m/z=193.1, (M+1)+.
The compound was prepared from the compound of Example 34(b) (1.34 g, 7.0 mmol), CeCl3.7H2O (2.86 g, 7.7 mmol) and NaBH4 (0.32 g, 8.4 mmol) in MeOH (35 ml). Yield 1.06 g. 1H NMR (400 MHz, CDCl3): 1.32 (3H, s), 1.33 (3H, s), 3.92-3.99 (1H, m), 4.36-4.47 (2H, m), 5.96-6.00 (1H, m), 7.06-7.08 (1H, m), 7.12-7.14 (1H, m), 7.63-7.66 (1H, m).
The compound was prepared from the compound of Example 34(c) (1.04 g, 5.4 mmol), DPPA (1.92 g, 1.50 ml, 7.0 mml) and DBU (1.22 g, 1.20 ml, 8.0 mmol) in toluene (15 ml)/THF (13 ml). Yield 0.82 g. m/z=220.2, (M+1)+.
The compound of Example 34(d) (0.81 g, 3.7 mmol) was dissolved in MeOH (10 ml) and 10% Pd/C (0.10 g) was added. The mixture was hydrogenated at RT and atmospheric pressure for 2 h. The catalyst was filtered off and the solvent evaporated. Yield 0.66 g. m/z=194.2, (M+1)+.
The compound was prepared from the compound of Example 34(e) (0.64 g, 3.3 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.63 g, 3.3 mmol) and DIPEA (1.07 g, 1.44 ml, 8.3 mmol) in DMSO (10 ml) for 6 h at 100° C. yielding, after trituration with heptane/Et2O 0.24 g of the title compound. m/z=363.7, (M+1)+.
The compound was prepared from the compound of Example 34(f) (0.28 g, 0.77 mmol), 60% NaH dispersion (62 mg, 1.5 mmol) and iodomethane (0.17 g, 0.072 ml, 1.2 mmol) in DMF (4 ml) yielding 0.20 g of the title compound as a racemic mixture. Enantiomers were separated using preparative HPLC (Daicel Chiralpack IA, 2 cm×25 cm, 80% hexane+0.2% DEA−20% EtOH+0.2% DEA, 20 ml/min, run time 35 min) yielding 66 mg of enantiomer 1 (rt 13 min) and 64 mg of enantiomer 2 (rt 17 min). 1H NMR (400 MHz, CDCl3): 1.20 (3H, s), 1.45 (3H, s), 3.03 (3H, s), 4.29-4.36 (1H, m), 4.46-4.66 (2H, m), 5.77-5.83 (1H, m), 6.91 (1H, dd), 7.04 (1H, d), 7.12-7.14 (1H, m), 7.15-7.18 (1H, m), 7.61 (1H, d), 7.70 (1H, s).
The title compound was prepared from 4-(3-(1H-1,2,4-triazol-1-yl)cyclopentylamino)-2-(trifluoromethyl)benzonitrile (1.06 g, 3.3 mmol), 60% NaH dispersion (0.26 g, 6.6 mmol) and iodomethane (0.70 g, 0.31 ml, 5.0 mmol) in DMF (10 ml) yielding 0.75 g of the title compound as a racemate. Enantiomers were separated using preparative HPLC (Daicel Chiralpack IA, 2 cm×25 cm, 97% TBME+0.2% DEA−3% EtOH+0.2% DEA, 10 ml/min, run time 50 min) yielding 58 mg of trans-enantiomer 1 (rt 26 min), 92 mg of cis-enantiomer 1 (rt 27.3 min), 100 mg of cis-enantiomer 2 (rt 34.4 min) and 71 mg of trans-enantiomer 2 (rt 37.7 min). 1H NMR (400 MHz, CDCl3): cis; 1.83-1.93 (1H, m), 2.10-2.50 (5H, m), 2.96 (3H, s), 4.81-4.97 (2H, m), 6.92 (1H, dd), 7.08 (1H, d), 7.60 (1H, d), 7.99 (1H, s), 8.12 (1H, s), trans; 2.00-2.33 (5H, m), 2-55-2.62 (1H, m), 3.04 (3H, s), 4.40-4.51 (1H, m), 4.79-4.89 (1H, m), 6.89 (1H, dd), 7.04 (1H, d), 7.59 (1H, d), 7.98 (1H, s), 8.13 (1H, s).
To a solution of 3-amino-2,2-dimethylcyclopentanone (1.3 g, 0.010 mol) in MeCN (50 ml) were added diisopropylamine (3.1 g, 0.031 mol) and Boc2O (4.5 g, 0.021 mol) and the mixture was heated at 60° C. for 3 h. The solvent was removed from the mixture and the crude residue was purified by column chromatography over silica gel using 15% EtOAc in hexane as the eluent. Yield 1.3 g. m/z 228.1 [M+H]+.
To a mixture of the compound of Example 36(a) (0.5 g, 0.002 mol) and 1,1,1-trifluoro-N-phenyl-N-((trifluoromethyl)sulfonyl)methanesulfonamide (1.57 g, 0.004 mol) in THF (30 ml) was added potassium bis(trimethylsilyl)amide (0.5 M solution in THF, 13.2 ml, 0.007 mol) at −78° C. followed by stirring for 2 h. The mixture was quenched by 1M NaOH solution and extracted with EtOAc. The organic layer was washed with water, dried, filtered and concentrated. The crude product was purified by column chromatography over silica gel using 10% EtOAc in hexane as the eluent. Yield: 1.0 g (crude). 1H-NMR (400 MHz; DMSO-d6: 0.90 (s, 3H), 1.09 (s, 3H), 1.40 (s, 9H), 2.21-2.31 (m, 1H), 2.52-2.61 (m, 1H), 3.93-4.04 (m, 1H), 5.61 (br, s, 1H), 11.80 (br, s, 1H).
To a mixture of the compound of Example 36(b) (1.0 g, 2.78 mmol) and pyridin-3-ylboronic acid (0.450 g, 3.62 mmol) in toluene (40 ml) and EtOH (20 ml) were added Pd(PPh3)4(0.3 g, 0.278 mmol), Na2CO3 (1.5 g, 13.9 mmol) and water (1 ml) under argon atmosphere. The reaction was heated at 100° C. for 2 h. The mixture was filtered through a celite bed, washed with EtOH and the filtrate was concentrated under reduced pressure. The residue was purified by column chromatography over silica gel using 30% EtOAc in hexane as the eluent to give 0.380 g of the title compound. LCMS: m/z=289.16 [M+H]+.
To a solution of the compound of Example 36(c) (0.6 g, 2.08 mmol) in 1,4-dioxane (2 ml) was added 4N HCl in 1,4-dioxane (10 ml) and the mixture was stirred at RT for 2 h. The mixture was concentrated under reduced pressure and the solid formed was triturated with Et2O, filtered and dried under vacuum to give 0.402 g of the title compound. LCMS: m/z=189.13 [M+H]+.
The compound was prepared starting from the compound of Example 36(d) (0.200 g), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.168 g) and DIPEA (0.465 ml). Crude product was purified by chromatography (CombiFlash C18-RP, eluent A: 0.5% HCOOH/H2O, B: MeOH, B: 40-90%) to obtain 0.135 g of the title compound as a mixture of enantiomers. 1H NMR (400 MHz, CDCl3): 1.19 (s, 3H), 1.25 (s, 3H), 2.24-2.31 (m, 1H), 2.88-2.95 (m, 1H), 4.00-4.06 (m, 1H), 4.61 (d, 1H), 5.85 (t, 1H), 6.79 (dd, 1H), 6.95 (d, 1H), 7.25-7.29 (m, 1H), 7.57 (d, 1H), 7.61 (m, 1H), 8.54 (dd, 1H), 8.58 (d, 1H).
The compound was prepared from the compound of Example 36(e) (0.135 g), iodoethane (0.038 ml) and sodium hydride (60% dispersion in mineral oil, 0.044 g). Crude product was purified by chromatography (CombiFlash C18-RP, eluent A: 0.5% HCOOH/H2O, B: MeOH, B: 35-90%) to obtain 0.066 g of the title compound as a mixture of enantiomers. 1H NMR (400 MHz, CDCl3): 1.01 (s, 3H), 1.25 (t, 3H), 1.32 (s, 3H), 2.64-2.77 (m, 1H), 2.92-2.99 (m, 1H), 3.37-3.63 (m, 2H), 4.51 (dd, 1H), 5.89 (t, 1H), 6.90 (dd, 1H), 7.09 (d, 1H), 7.26-7.31 (m, 1H), 7.55-7.64 (m, 2H), 8.51-8.59 (m, 2H).
The compound was prepared from 1-ethyl-4,5-diiodo-1H-imidazole (0.80 g), and 4-(ethyl(3-oxocyclohexyl)amino)-2-(trifluoromethyl)benzonitrile (0.71 g), and ethylmagnesium bromide (3 M in diethyl ether, 0.84 ml). Yield 1.29 g. LCMS: M+1 533. The product was used in the next step without purification.
The compound was prepared from the compound of Example 37(a) (crude product, 0.75 g) and EtMgBr (3M in diethyl ether, 1.88 ml), 2 h, −30° C. Crude product was purified by chromatography (CombiFlash C18-RP, eluent A: 0.5% HCOOH/H2O, B: MeOH, B: 50-90%) to obtain 42 mg of the title compound as a mixture of isomers. 1H NMR (400 MHz, CDCl3): 1.18-1.22 (m, 3H), 1.40-1.46 (m, 3H), 1.58-1.65 (m, 1H), 1.68-2.14 (m, 7H), 2.19-2.22 (m, 1H), 3.28-3.48 (m, 2H), 4.18-4.38 (m, 3H), 6.68-6.79 (m, 1H), 6.84-6.93 (m, 1H), 6.99-7.06 (m, 1H), 7.34-7.44 (m, 1H), 7.49-7.59 (m, 1H).
The compound was prepared from 2-bromoethyl methyl ether (1.32 ml), 4,5-diiodo-1H-imidazole (3.00 g), sodium hydroxide 50% (20 ml) and tetrabutylammonium iodide (3.46 g) in toluene (120 ml), 9 h, 40° C. Yield 3.03 g. 1H NMR (400 MHz, CDCl3): 3.32 (s, 3H), 3.59 (t, 2H), 4.14 (t, 2H), 7.68 (s, 1H).
The compound was prepared from the compound of Example 38(a) (3.0 g), 4-(ethyl(3-oxocyclohexyl)amino)-2-(trifluoromethyl)benzonitrile (2.46 g) and EtMgBr (3M in diethyl ether, 2.91 ml). Reaction time was overnight at RT. Yield 4.47 g. LCMS: M+1 564. The product was used to next step without purification.
The compound was prepared from the compound of Example 38(b) (2.0 g), potassium carbonate (1.23 g) and Pd 10% on activated C (0.035 g) in MeOH (120 ml). The mixture was hydrogenated under pressure (2.3 bar) for 2 h. The mixture was filtered through Celite and filtrate evaporated to dryness. 0.50 g of the crude title product was purified by chromatography (CombiFlash C18-RP, eluent A: 0.5% HCOOH/H2O, B: MeOH, B: 50-90%). Yield 0.120 g. 1H NMR (400 MHz, CDCl3): 1.20 (t, 3H), 1.56-2.18 (m, 9H), 3.30 (s, 3H), 3.33-3.46 (m, 2H), 3.62-3.70 (m, 2H), 4.39-4.46 (m, 3H), 6.85-6.88 (m, 2H), 7.07 (d, 1H), 7.48 (s, 1H), 7.57 (d, 1H).
The compound was prepared from the title compound of Example 38 (0.75 g) and sulphuric acid (4.58 ml), 30 min, 0° C. Crude product was purified by chromatography (CombiFlash silica column, eluent: heptane-EtOAc) to obtain 0.046 g of the title compound as a mixture of enantiomers. 1H NMR (400 MHz, CDCl3): 1.26 (t, 3H), 1.80-2.06 (m, 2H), 2.28-2.48 (m, 4H), 3.33 (s, 3H), 3.39-3.49 (m, 2H), 3.62-3.65 (m, 2H), 4.02-4.15 (m, 3H), 5.83 (m, 1H), 6.85 (dd, 1H), 6.92 (s, 1H), 6.99 (d, 1H), 7.58 (s, 1H), 7.59 (d, 1H).
The compound was prepared from 1-iodo-2-methylpropane (2.59 g), 4,5-diiodo-1H-imidazole (3.0 g), NaOH 50% (20 ml) and tetrabutylammonium iodide (3.46 g) in toluene (120 ml), 4 h, 40° C. Yield 2.51 g. 1H NMR (400 MHz, CDCl3): 0.94 (d, 6H), 2.05-2.15 (m, 1H), 3.77 (d, 2H), 7.56 (s, 1H).
The compound was prepared from the compound of Example 40(a) (2.5 g), 4-(ethyl(3-oxocyclohexyl)amino)-2-(trifluoromethyl)benzonitrile (2.063 g) and EtMgBr (3M in diethyl ether, 2.44 ml). Reaction time was overnight at RT. Yield 3.73 g. LCM: M+1 562. Compound was used as such in the next step.
The compound was prepared from the compound of Example 40(b) (3.80 g), potassium carbonate (2.34 g) and Pd 10% on activated C (0.035 g). The mixture was hydrogenated under pressure (2.3 bar) for 1 h. Crude product was purified by chromatography (CombiFlash C18-RP, eluent A: 0.5% HCOOH/H2O, B: MeOH, B: 50-90%). Yield 0.473 g as a mixture of isomers. 1H NMR (400 MHz, DMSO-d6): 0.81 (d, 3H), 0.85 (d, 3H), 1.10 (t, 3H), 1.63-1.92 (m, 7H), 1.93-2.08 (m, 2H), 2.15 (m, 1H), 3.35-3.57 (m, 2H), 3.85-4.02 (m, 2H), 4.18-4.28 (m, 1H), 6.72 (s, 1H), 7.03 (dd, 1H), 7.09 (s, 1H), 7.52 (s, 1H), 7.79 (d, 1H).
The compound was prepared from the title compound of Example 40 (0.10 g), and sulphuric acid (0.613 ml), 30 min, 0° C. Crude product was purified by chromatography (CombiFlash C18-RP, eluent A: 0.5% HCOOH/H2O, B: MeOH, B: 50-90%) to obtain 0.008 g of the title compound as a mixture of enantiomers. 1H NMR (400 MHz, CDCl3): 0.89 (d, 3H), 0.91 (d, 3H), 1.26 (t, 3H), 1.80-1.94 (m, 1H), 1.94-2.10 (m, 2H), 2.42-2.50 (m, 4H), 3.36-3.51 (m, 2H), 3.73 (d, 2H), 4.03-4.13 (m, 1H), 5.81-5.87 (m, 1H), 6.84 (dd, 1H), 6.91 (s, 1H), 6.99 (d, 1H), 7.39 (s, 1H), 7.59 (d, 1H).
To a solution of imidazole (57.8 g) in DCM (400 ml) SOCl2(18.8 ml) was added dropwise at 0° C. followed by stirring for 30 min. To this suspension was added slowly a solution of benzyl (3-oxocyclohexyl)carbamate (35 g) in DCM (200 ml) at 0° C. and the mixture was stirred at RT for 24 h. The mixture was adjusted to pH 11 by the addition of saturated aqueous NaHCO3 solution. The resulting bi-phasic mixture was extracted with DCM, washed with H2O, dried and concentrated. The resulting viscous oil was purified by reverse phase HPLC to give mixture (13 g) of benzyl (3-(1H-imidazol-1-yl)cyclohex-3-en-1-yl)carbamate and (3-(1H-imidazol-1-yl)cyclohex-2-en-1-yl)carbamate (regioisomers). The pure isomeric mixture was further separated by normal phase chiral HPLC (OJ-H (20×250) mm; 5μ) using hexane/ethanol (75% with 0.1% DEA) as the eluents. Yields: 4 g, benzyl (3-(1H-imidazol-1-yl)cyclohex-3-en-1-yl)carbamate (isomer 1); 3 g, benzyl (3-(1H-imidazol-1-yl)cyclohex-2-en-1-yl)carbamate (isomer 2). MS: m/z=298 [M+1]+. Benzyloxycarbonyl group of the isomer 1 (0.20 g) was removed by adding KOH (5 eq) in 1,4-dioxane and heating the mixture at 80° C. for 24 h. Yield of the title compound: 0.050 g (purity about 85%). MS: m/z 164 [M+1]+.
The compound was prepared from 0.50 g of the compound of Example 42(a), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.579 g, and DIPEA (1.60 ml). Yield 0.88 g. 1H NMR (400 MHz, CDCl3): 1.71-1.84 (m, 1H), 2.00-2.10 (m, 1H), 2.35-2.50 (m, 3H), 2.88-2.96 (m, 1H), 3.89-4.02 (m, 1H), 4.97 (d, 1H), 5.88-5.95 (m, 1H), 6.75 (dd, 1H), 6.92 (d, 1H), 7.05-7.12 (m, 2H), 7.57 (d, 1H), 7.64 (t, 1H).
The compound was prepared from the compound of Example 42(b) (0.88 g), iodoethane (0.42 ml) and sodium hydride (60% dispersion in mineral oil, 0.265 g). Crude title product was purified and isomers separated by chromatography (1st silica column, eluent 0-1% MeOH/DCM, 2nd Chiralpak IA 20×250 mm, 5 μm, A: n-hexane+0.2% DEA, B: EtOH+0.2% DEA, B: 10%, 20 ml/min) to obtain enantiomer 1 (yield 0.17 g, rt 32 min) and enantiomer 2 (yield 0.16 g, rt 38 min). 1H NMR (400 MHz, CDCl3): 1.28 (t, 3H), 1.84-1.99 (m, 1H), 1.99-2.08 (m, 1H), 2.40-2.50 (m, 2H), 2.60-2.68 (m, 2H), 3.37-3.55 (m, 2H), 4.13-4.24 (m, 1H), 5.88-5.94 (m, 1H), 6.87 (dd, 1H), 7.01 (d, 1H), 7.09 (m, 2H), 7.60 (dd, 1H), 7.63-7.70 (m, 1H).
The compound was prepared from 4-(3-(1H-imidazol-1-yl)cyclohex-3-enylamino)-2-(trifluoromethyl)benzonitrile (0.83 g), iodomethane (0.709 g) and sodium hydride (60% dispersion in mineral oil, 0.25 g). Crude product was purified and isomers separated by chromatography (1st silica column, eluent 0-0.5% MeOH/DCM, 2nd Chiralpak IA 20×250 mm, 5 μm, eluent A: MTBE+0.2% DEA, B: EtOH+0.2% DEA, B: 10%, 20 ml/min) to obtain enantiomer 1 (yield 0.077 g, rt 12.5 min) and enantiomer 2 (yield 0.088 g, rt 16 min). 1H NMR (400 MHz, CDCl3): 1.89-2.00 (m, 2H), 2.41-2.49 (m, 2H), 2.62-2.69 (m, 2H), 2.98 (s, 3H), 4.12-4.26 (m, 1H), 5.92 (d, 1H), 6.90 (dd, 1H), 7.04 (d, 1H), 7.09-7.10 (m, 2H), 7.62 (d, 1H), 7.65-7.70 (m, 1H).
To a suspension of 4-(5-hydroxy-2,2-dimethylcyclohexylamino)-2-(trifluoromethyl)benzonitrile (3.60 g), TEA (3.21 ml) and DCM (40 ml) at 0° C. was added slowly a solution of methanesulfonyl chloride (1.16 ml) in DCM (15 ml). The mixture was stirred at RT for 1.5 h. Water was added and the organic phase was washed with water and 0.5 M HCl, dried and evaporated to obtain the title product in 4.11 g yield as a mixture of diastereomers (1H NMR trans:cis 85:15). LCMS: M+1 391.
The compound was prepared from sodium hydride (60% dispersion in mineral oil, 0.615 g) in DMF (10 ml), the compound of Example 44(a) (2.0 g) and iodoethane (0.824 ml) to yield 1.786 g of the title product as a mixture of diastereomers (1H NMR trans:cis 85:15). LCMS: M+1 419.
The compound of Example 44(b) (0.50 g), 1,2,4-triazole sodium derivate (0.218 g) and DMF (5 ml) under N2 was heated at 100° C. for 0.5 h. Ethyl acetate and water were added. The organic phase was washed with water, dried and evaporated to dryness. Crude product of the title compound was purified and isomers were separated by chromatography (1st silica column, eluent DCM+0.5% MeOH, 2nd Chiralpak IA 20×250 mm, 5 m, eluent MTBE+0.2% DEA, 20 ml/min) to obtain pure diastereomers of the title compound. Retention times and yields: (1) 8 min, 0.075 g, (2) 9 min, 0.095 g, (3) 16 min, 0.006 g and (4) 20 min, 0.005 g. Trans-isomers (1) and (2): 1H NMR (400 MHz, CDCl3): 0.88 (s, 3H), 1.13-1.18 (m, 6H), 1.37-1.43 (m, 1H), 1.79-1.87 (m, 1H), 1.91-2.19 (m, 2H), 2.19-2.35 (m, 1H), 2.40-2.46 (m, 1H), 3.33-3.58 (m, 2H), 4.70 (dd, 1H), 4.78-4.83 (m, 1H), 6.90 (dd, 1H), 7.20 (d, 1H), 7.54 (dd, 1H), 7.99 (s, 1H), 8.17 (s, 1H). Cis-isomers (3) and (4): 1H NMR (400 MHz, CDCl3): 0.97 (s, 3H), 1.14 (t, 3H), 1.18 (s, 3H), 1.52-1.65 (m, 1H), 1.66-1.75 (m, 1H), 1.94-2.22 (m, 3H), 2.49 (q, 1H), 3.46 (q, 2H), 3.88 (dd, 1H), 4.35-4.43 (m, 1H), 6.92 (dd, 1H), 7.09 (d, 1H), 7.58 (d, 1H), 7.97 (s, 1H), 8.12 (s, 1H).
The compound was prepared from the compound of Example 44(a) (2.0 g), iodomethane (0.638 ml) and sodium hydride (60% dispersion in mineral oil, 0.615 g). Yield 1.844 g. Product is a mixture of diastereomers (1H NMR trans:cis 87:13). LCMS: M+1 405.
The compound was prepared from the compound of Example 45(a) (0.75 g), and 1,2,4-triazole sodium derivate (0.338 g). Crude product of the title compound was purified and isomers were separated by chromatography (1st silica column, eluent DCM+0.5% MeOH gave mixture of isomers, 2nd and 3rd Chiralpak IA 20×250 mm, 5 μm, 1st eluent: A: MTBE+0.2% DEA, B: EtOH+0.2% DEA, B: 15%, 20 ml/min, gave mixture of trans-isomers (1) and (2), rt 6.5 min, and pure cis-isomers (3), rt 14 min, and (4), rt 16 min, 2nd eluent A: MTBE+0.2% DEA, B: EtOH+0.2% DEA, B: 3%, 20 ml/min, separated trans-isomers (1), rt 43 min, and (2), rt 59 min). Yields: (1) 0.086 g, (2) 0.105 g, (3) 0.010 g, (4) 0.010 g. Trans-isomers (1) and (2): 1H NMR (400 MHz, CDCl3): 0.90 (s, 3H), 1.17 (s, 3H), 1.37-1.46 (m, 1H), 1.76-1.88 (m, 1H), 1.98-2.23 (m, 3H), 2.37-2.49 (m, 1H), 2.92 (s, 3H), 4.64 (dd, 1H), 4.74-4.85 (m, 1H), 6.88 (dd, 1H), 7.19 (d, 1H), 7.56 (d, 1H), 8.00 (s, 1H), 8.15 (s, 1H). Cis-isomers (3) and (4): 1H NMR (400 MHz, CDCl3): 1.00 (s, 3H), 1.20 (s, 3H), 1.54-1.66 (m, 1H), 1.68-1.79 (m, 1H), 1.98-2.20 (m, 3H), 2.51 (q, 1H), 2.94 (s, 3H), 3.85 (dd, 1H), 4.34-4.46 (m, 1H), 6.93 (dd, 1H), 7.09 (d, 1H), 7.60 (dd, 1H), 7.96 (s, 1H), 8.11 (s, 1H).
The compound was prepared from the compound of Example 44(b) (1.20 g) and sodium imidazol-1-ide (0.65 g). The mixture was heated at 100° C. for 45 min. Crude product was purified and isomers separated by chromatography (1st silica column, eluent DCM+0-1.5% MeOH, 2nd Chiralpak IA 20×250 mm, 5 μm, eluent A: MTBE+0.2% DEA, B: IPA+0.2% DEA, B: 8%, 20 ml/min) to obtain pure diastereomers. Retention times and yields: (1) 10 min, 0.183 g, (2) 14 min, 0.008 g, (3) 19 min, 0.010 g and (4) 22 min, 0.187 g. Trans-isomers (1) and (4): 1H NMR (400 MHz, CDCl3): 0.86 (s, 3H), 1.14 (s, 3H), 1.20 (t, 3H), 1.42-1.54 (m, 1H), 1.60-1.72 (m, 1H), 1.99-2.15 (m, 1H), 2.17-2.31 (m, 2H), 2.41-2.52 (m, 1H), 3.41-3.51 (m, 2H), 3.86-3.93 (dd, 1H), 4.52-4.58 (m, 1H), 6.75 (dd, 1H), 6.93 (d, 1H), 7.03 (t, 1H), 7.16 (t, 1H), 7.52 (dd, 1H), 7.65 (t, 1H). Cis-isomers (2) and (3): 1H NMR (400 MHz, CDCl3): 0.96 (s, 3H), 1.12-1.16 (m, 6H), 1.53-1.62 (m, 1H), 1.65-1.72 (m, 1H), 1.90-1.99 (m, 1H), 2.00-2.16 (m, 2H), 2.26 (q, 1H), 3.41-3.48 (m, 2H), 3.87 (dd, 1H), 4.12-4.19 (m, 1H), 6.92 (dd, 1H), 6.98-7.02 (m, 1H), 7.06-7.12 (m, 2H), 7.55-7.62 (m, 2H).
The compound was prepared from the compound of Example 45(a) (0.90 g) and sodium imidazol-1-ide (0.50 g). Crude product of the title compound was purified and isomers were separated by chromatography (1st silica column, eluent DCM+0-2% MeOH, 2nd Chiralpak IA 20×250 mm, 5 μm, eluent A: MTBE+0.2% DEA, B: IPA+0.2% DEA, B: 2%, 20 ml/min) to obtain pure diastereomers. Retention times and yields: (1) 25 min, 0.027 g, (2) 31 min, 0.027 g, (3) 49 min, 0.005 g and (4) 62 min, 0.005 g. Trans-isomers (1) and (2): 1H NMR (400 MHz, CDCl3): 0.88 (s, 3H), 1.17 (s, 3H), 1.45-1.56 (m, 1H), 1.62-1.75 (m, 1H), 2.01-2.21 (m, 2H), 2.21-2.32 (m, 1H), 2.44-2.54 (m, 1H), 2.96 (s, 3H), 3.86 (dd, 1H), 4.53-4.58 (m, 1H), 6.75 (dd, 1H), 6.92 (d, 1H), 7.02 (t, 1H), 7.16 (t, 1H), 7.49-7.55 (m, 1H), 7.65 (s, 1H). Cis-isomers (3) and (4): 1H NMR (400 MHz, CDCl3): 0.99 (s, 3H), 1.18 (s, 3H), 1.55-1.64 (m, 1H), 1.68-1.75 (m, 1H), 1.87-1.99 (m, 1H), 1.99-2.12 (m, 2H), 2.29 (q, 1H), 2.93 (s, 3H), 3.84 (dd, 1H), 4.12-4.22 (m, 1H), 6.93 (dd, 1H), 6.98-7.02 (m, 1H), 7.07-7.12 (m, 2H), 7.56-7.63 (m, 2H).
The compound was prepared from sodium hydride (60% dispersion in mineral oil, 0.143 g) in DMF (10 ml), pyrazole (0.122 g) and the compound of Example 9(a) (0.70 g) in DMF (5 ml). Crude product of the title compound was purified by chromatography (silica column, eluent 0-2% MeOH/DCM) to obtain 0.055 g of a mixture of trans-isomers and 0.013 g of a mixture of cis-isomers of the title compound. Trans-isomers: 1H NMR (400 MHz, CDCl3): 1.23 (t, 3H), 1.62-1.89 (m, 5H), 1.89-2.02 (m, 1H), 2.18-2.29 (m, 1H), 2.53-2.64 (m, 1H), 3.27-3.53 (m, 2H), 4.43-4.57 (m, 1H), 4.59-4.69 (m, 1H), 6.32-6.37 (m, 1H), 6.88 (dd, 1H), 7.36 (d, 1H), 7.48 (d, 1H), 7.54 (dd, 1H), 7.60 (d, 1H). Cis-isomers: 1H NMR (400 MHz, CDCl3): 1.21 (t, 3H), 1.53-1.67 (m, 2H), 1.78-1.97 (m, 2H), 2.03-2.15 (m, 2H), 2.15-2.24 (m, 1H), 2.24-2.35 (m, 1H), 3.43 (q, 2H), 3.80-3.90 (m, 1H), 4.22-4.34 (m, 1H), 6.23-6.28 (m, 1H), 6.81 (dd, 1H), 6.96 (d, 1H), 7.44 (dd, 1H), 7.53 (d, 1H), 7.58 (d, 1H).
To a solution of tert-butyl 3-aminopiperidine-1-carboxylate (25 g, 125 mmol) in acetone (200 ml) was added K2CO3 (51.81 g, 375 mmol) at RT and the mixture was stirred for 10 min. A solution of benzyl bromide (40.94 g, 239 mmol) was added dropwise and stirring continued at RT for 16 h. The mixture was concentrated under reduced pressure, water (250 ml) was added and the mixture was extracted with EtOAc (2×500 ml). The organic layer was dried, filtered and concentrated to obtain the crude compound. The compound was purified by flash column using 100-200 mesh silica gel and eluted EtOAc in petroleum ether. Yield 20 g. m/z=381.2 (M+1)+.
A solution of Example 49 (a) (20.00 g), in trifluoroacetic acid (100 ml) was stirred at RT for 16 h. The mixture was concentrated under reduced pressure, poured into water (250 ml) and extracted with EtOAc (2×500 ml). The organic layer was washed with 2N NaOH solution, dried, filtered and concentrated to obtain the crude compound. The compound was directly used for next step without further purification. m/z=281.2 (M+1)+.
To a solution of 3-bromo-4H-1,2,4-triazole (5.0 g, 34.2 mmol) in DMF (100 ml) was added K2CO3 (9.45 g, 68.5 mmol) at RT and stirred for 10 min. A solution of ethyl iodide (11.70 g, 75 mmol) was added dropwise followed by stirring for 16 h. The mixture was poured into ice cold water (250 ml) and extracted with EtOAc (2×200 ml). The organic layer was dried, filtered and concentrated to give crude compound. This was purified by flash column using 230-400 mesh silica gel and eluted with EtOAc in petroleum ether. Yield 3.5 g. m/z=176.0, 178.0 (M+1)+.
To a stirred solution of the compound of Example 49 (b) (1.5 g, 5.33 mmol) and the compound of Example 49 (c) (1.39 g, 7.99 mmol) in DMSO (25 ml) were added K2CO3 (2.2 g, 16.0 mmol), L-proline (0.06 g, 0.53 mmol) and CuI (0.101 g, 0.53 mmol) sequentially. The mixture was stirred for 16 h at 100° C., poured into ice cold water (250 ml) and extracted with EtOAc (2×200 ml). The organic layer was dried, filtered and concentrated to give crude compound. This was purified by flash column using 230-400 mesh silica gel and eluted with 70% EtOAc in petroleum ether. Yield 0.66 g. m/z=376.2 (M+1)+.
To a solution of the compound of Example 49 (d) (0.15 g, 0.401 mmol) in methanol (10 ml) was added Pd(OH)2 (0.01 g) and the mixture was hydrogenated at 80 psi for 16 h. The mixture was filtered through celite pad and the filtrate was evaporated to dryness to give the title compound. The crude compound was directly used for next step without further purification. Yield: 0.050 g.
To the compound of Example 49 (e) (0.2 g, 1.02 mmol) in CH2Cl2 (10 ml) was added Et3N (0.155 g, 1.54 mmol) and (Boc)2O (0.34 g, 1.54 mmol) followed by stirring for 16 h at RT. The mixture was poured into ice cold water (50 ml) and extracted with EtOAc (2×100 ml). The organic layer was dried, filtered and concentrated to give crude product. This was purified by flash column using 230-400 mesh silica gel and eluted with 50% EtOAc in petroleum ether. Yield 0.20 g. 1H NMR (400 MHz, CDCl3): 1.40-1.11 (m, 12H), 1.55-1.65 (m, 1H), 1.65-1.75 (m, 1H), 1.80-1.95 (m, 2H), 2.85-2.93 (m, 1H), 3.00-3.08 (m, 1H), 3.10-3.18 (m, 1H), 3.30-3.40 (m, 1H), 3.78-3.85 (m, 1H), 4.00 (q, 2H), 4.87-4.92 (m, 1H), 7.62 (s, 1H).
A solution of the compound of Example 49 (f) (0.2 g) in HCl in dioxane (2 ml) was stirred for 3 h at RT. The mixture was concentrated under reduced pressure. Yield 0.13 g. m/z=196.1 (M+1)+.
The compound was prepared from the compound of Example 49(g) (0.310 g), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.253 g) and DIPEA (1.16 ml). Crude product was purified by chromatography (silica column, eluent 0-1% MeOH/DCM) to obtain 0.070 g of the title compound as a mixture of enantiomers. 1H NMR (400 MHz, CDCl3): 1.46 (t, 3H), 1.63-1.73 (m, 1H), 1.75-1.99 (m, 3H), 3.10-3.27 (m, 3H), 3.50 (dd, 1H), 3.77-3.86 (m, 1H), 3.99 (q, 2H), 5.93 (d, 1H), 6.75 (dd, 1H), 6.94 (d, 1H), 7.54 (d, 1H), 7.66 (s, 1H).
The compound was prepared from the compound of Example 49(h) (0.035 g), iodoethane (0.012 ml) and sodium hydride (60% dispersion in mineral oil, 0.008 g). Compound was purified by chromatography (silica column, eluent 0-2% MeOH/DCM) to obtain 0.010 g of the title compound as a mixture of enantiomers. 1H NMR (400 MHz, CDCl3): 1.23 (t, 3H), 1.47 (t, 3H), 1.74-1.97 (m, 3H), 2.05-2.13 (m, 1H), 2.90-3.01 (m, 2H), 3.27-3.34 (m, 1H), 3.35-3.55 (m, 3H), 4.01 (q, 2H), 4.20-4.29 (m, 1H), 6.95 (dd, 1H), 7.29 (d, 1H), 7.59 (dd, 1H), 7.66 (s, 1H).
The compound was prepared from the compound of Example 49(a) (0.035 g), iodomethane (0.009 ml) and sodium hydride (60% dispersion in mineral oil, 0.008 g). Yield 0.036 g. 1H NMR (400 MHz, CDCl3): 1.47 (t, 3H), 1.75-1.96 (m, 3H), 1.97-2.05 (m, 1H), 2.87-2.96 (m, 1H), 2.97 (s, 3H), 3.03 (dd, 1H), 3.27-3.37 (m, 1H), 3.35-3.41 (m, 1H), 4.01 (q, 2H), 4.18-4.27 (m, 1H), 6.96 (dd, 1H), 7.26 (d, 1H), 7.61 (dd, 1H), 7.66 (s, 1H).
The compound was prepared from tert-butyl 3-formylcyclopent-3-enylcarbamate (0.47 g), isopropylamine (0.263 g), tosylmethyl isocyanide (0.521 g) and DBU (0.677 g). Crude product was purified by chromatography (silica column, eluent 0-1% MeOH/DCM). Yield 0.346 g as a mixture of enantiomers. 1H NMR (400 MHz, CDCl3): 1.46 (s, 9H), 1.48-1.53 (m, 6H), 2.36-2.45 (m, 1H), 2.52-2.68 (m, 1H), 2.89-2.98 (m, 1H), 3.03-3.13 (m, 1H), 4.28-4.45 (m, 1H), 4.48-4.58 (m, 1H), 4.77 (br. s., 1H), 5.74 (m, 1H), 6.97 (s, 1H), 7.60 (s, 1H).
The compound was prepared from the compound of Example 51(a) (0.42 g) and HCl, 4 M in dioxane (0.90 ml). The mixture was stirred overnight at RT. Yield 0.43 g. LCMS: M+1 192. The crude product was used as such in the next step.
The compound was prepared from the compound of Example 51(b) (0.30 g), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.215 g) and DIPEA (0.99 ml). The obtained product was purified by triturating with ether. Yield 0.15 g. 1H NMR (400 MHz, CDCl3): 1.53 (m, 6H), 2.52 (d, 1H), 2.59-2.70 (m, 1H), 3.02-3.16 (m, 1H), 3.20-3.60 (m, 1H), 4.23-4.35 (m, 1H), 4.52-4.62 (m, 1H), 4.83 (d, 1H), 5.81 (m, 1H), 6.71 (dd, 1H), 6.88 (d, 1H), 6.99 (s, 1H), 7.58 (d, 1H), 7.64 (s, 1H).
The compound was prepared from the compound of Example 51(c) (0.60 g), iodoethane (0.133 ml) and sodium hydride (55% dispersion in mineral oil, 0.200 g). Crude product was purified by chromatography (silica column, eluent 0-1% MeOH/DCM) to obtain the title compound as a mixture of enantiomers. Yield 0.480 g. The enantiomers were separated by chiral chromatography (column Chiralpak IA 20×250 mm, 5 m, eluent A: n-hexan+0.2% DEA, B: EtOH+0.2% DEA, B: 10%, 20 ml/min). Retention times and yields: (1) 29 min, 0.167 g and (2) 37 min, 0.155 g. 1H NMR (400 MHz, CDCl3): 1.24 (t, 3H), 1.52-1.58 (m, 6H), 2.65-2.75 (m, 1H), 2.80-2.93 (m, 1H), 2.95-3.04 (m, 1H), 3.07-3.18 (m, 1H), 3.42-3.58 (m, 2H), 4.53-4.75 (m, 2H), 5.85-5.93 (m, 1H), 6.82 (dd, 1H), 6.98 (d, 1H), 7.00 (s, 1H), 7.58 (d, 1H), 7.66 (s, 1H).
The compound was prepared from the compound of Example 51(c) (0.090 g), iodomethane (0.071 g) and sodium hydride (55% dispersion in mineral oil, 0.020 g). Crude product was purified by chromatography (silica column, eluent 0-1% MeOH/DCM). Yield 0.045 g as a mixture of enantiomers. 1H NMR (400 MHz, CDCl3): 1.52-1.57 (m, 6H), 2.60-2.70 (m, 1H), 2.75-2.85 (m, 1H), 2.94 (s, 3H), 2.98-3.08 (m, 1H), 3.09-3.19 (m, 1H), 4.53-4.63 (m, 1H), 4.76-4.85 (m, 1H), 5.87 (m., 1H), 6.87 (dd, 1H), 7.01 (s, 1H), 7.03 (d, 1H), 7.60 (d, 1H), 7.65 (s, 1H).
The compound was prepared from tert-butyl 3-formylcyclopent-3-enylcarbamate (0.42 g), cyclopropylamine (0.227 g), tosylmethyl isocyanide (0.466 g) and DBU (0.600 ml). Crude product was purified by chromatography (silica column, eluent 0-2% MeOH/DCM) to obtain the title compound as a mixture of enantiomers. Yield 0.14 g. 1H NMR (400 MHz, CDCl3): 1.01-1.04 (m, 2H), 1.07-1.11 (m, 2H), 1.46 (s, 9H), 2.35-2.47 (m, 1H), 2.51-2.61 (m, 1H), 2.96 (m, 1H), 3.08 (m, 1H), 3.20-3.30 (m, 1H), 4.37 (br. s., 1H), 4.77 (br. s., 1H), 6.10-6.18 (m, 1H), 6.92 (s, 1H), 7.47 (s, 1H).
The compound was prepared from the compound of Example 53(a) (0.14 g) and HCl, 4 M in dioxane (0.30 ml). Yield 0.127 g. The obtained crude product of the title compound was used as such in the next step.
The compound was prepared from the compound of Example 53(b) (0.127 g), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.092 g) and DIPEA (0.313 g). The product was purified by chromatography (silica column, eluent 0-1% MeOH/DCM). Yield 0.040 g as a mixture of enantiomers. 1H NMR (400 MHz, MeOH-d4): 1.00-1.09 (m, 2H), 1.12-1.18 (m, 2H), 2.52-2.59 (m, 1H), 2.65-2.71 (m, 1H), 3.07-3.15 (m, 1H), 3.18-3.25 (m, 1H), 3.38-3.42 (m, 1H), 4.28-4.35 (m, 1H), 6.33-6.30 (m, 1H), 6.86 (d, 1H), 6.91 (s, 1H), 7.00 (s, 1H), 7.61 (d, 1H), 7.66 (s, 1H).
The compound was prepared from the compound of Example 53(c) (0.040 g), iodoethane (0.026 g) and sodium hydride (60% dispersion in mineral oil, 0.009 mg). Crude product was purified by chromatography (silica column, eluent 1% MeOH/DCM) to obtain the title compound as a mixture of enantiomers. Yield 0.010 g. 1H NMR (400 MHz, CDCl3): 1.03-1.10 (m, 2H), 1.11-1.17 (m, 2H), 1.24 (t, 3H), 2.65-2.77 (m, 1H), 2.80-2.89 (m, 1H), 2.95-3.08 (m, 1H), 3.08-3.15 (m, 1H), 3.26-3.35 (m, 1H), 3.45-3.52 (m, 2H), 4.61-4.73 (m, 1H), 6.27-6.31 (m, 1H), 6.81 (dd, 1H), 6.94 (s, 1H), 6.99 (d, 1H), 7.52 (s, 1H), 7.58 (d, 1H).
The compound was prepared from tert-butyl 3-formylcyclopent-3-enylcarbamate (0.42 g), tert-butylamine (0.418 ml), tosylmethyl isocyanide (0.466 g) and DBU (0.600 ml). The crude product was purified by chromatography (silica column, eluent 0-2.5% MeOH/DCM) to obtain the title product as a mixture of enantiomers. Yield 0.23 g. 1H NMR (400 MHz, CDCl3): 1.45 (s, 9H), 1.59 (s, 9H), 2.24-2.37 (m, 1H), 2.43-2.56 (m, 1H), 2.89 (m, 1H), 3.01 (m, 1H), 4.38 (br. s., 1H), 4.76 (br. s., 1H), 5.78-5.82 (m, 1H), 6.84 (d, 1H), 7.59 (d, 1H).
The compound was prepared from the compound of Example 54(a) (0.23 g), and HCl, 4 M in dioxane (0.47 ml). Yield 0.21 g. The obtained crude product of the title compound was used as such in the next step.
The compound was prepared from the compound of Example 54(b) (0.210 g), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.142 g) and DIPEA (0.657 ml). Yield 0.21 g as a mixture of enantiomers. 1H NMR (400 MHz, CDCl3): 1.61 (s, 9H), 2.42-2.51 (m, 1H), 2.55-2.65 (m, 1H), 3.01-3.11 (m, 1H), 3.11-3.23 (m, 1H), 4.30 (m, 1H), 4.89 (d, 1H), 5.89 (m, 1H), 6.71 (dd, 1H), 6.88 (d, 2H), 7.57 (d, 1H), 7.61 (d, 1H).
The compound was prepared from the compound of Example 54(c) (0.210 g), iodoethane (0.064 ml) and sodium hydride (60% dispersion in mineral oil, 0.043 g). Crude product was purified by chromatography (column: Waters XBridge C18 30-100 mm, eluent A: 0.1% NH4OH, B: 0.1% NH4OH/ACN, B: 30-90% 1-20 min, 30 ml/min). Yield 0.003 g as a mixture of enantiomers. 1H NMR (400 MHz, CDCl3): 1.26 (t, 3H), 1.63 (s, 9H), 2.62-2.73 (m, 1H), 2.79 (m, 1H), 2.87-2.98 (m, 1H), 3.00-3.09 (m, 1H), 3.50 (q, 2H), 4.57-4.82 (m, 1H), 5.97 (m, 1H), 6.82 (dd, 1H), 6.93 (s, 1H), 6.98 (d, 1H), 7.59 (d, 1H), 7.70 (s, 1H).
The compound was prepared from tert-butyl 3-formylcyclopent-3-enylcarbamate (0.60 g), 3-(1H-imidazol-1-yl)propan-1-amine (0.711 g), tosylmethyl isocyanide (0.665 g) and DBU (0.856 ml). Crude product was purified by chromatography (silica column, eluent 0-8% MeOH/DCM). Yield 0.29 g as a mixture of enantiomers. 1H NMR (400 MHz, CDCl3): 1.46 (s, 9H), 2.23-2.30 (m, 2H), 2.32-2.42 (m, 1H), 2.47-2.58 (m, 1H), 2.91 (dd, 1H), 3.05 (dd, 1H), 3.86-4.05 (m, 4H), 4.35 (br. s., 1H), 4.92 (br. s., 1H), 5.46-5.56 (m, 1H), 6.91 (t, 1H), 7.00 (s, 1H), 7.12 (t, 1H), 7.40 (d, 1H), 7.43-7.45 (m, 1H).
The compound was prepared from the compound of Example 55(a) (0.23 g), and HCl, 4 M in dioxane (0.563 ml). Yield 0.21 g. Product was used as such in the next step.
The compound was prepared from the compound of Example 55(b) (0.21 g), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.212 g) and DIPEA (0.976 ml). Yield 0.24 g 1H NMR (400 MHz, CDCl3): 2.24-2.36 (m, 2H), 2.39-2.45 (m, 1H), 2.51-2.59 (m, 1H), 2.94-3.05 (m, 1H), 3.15-3.24 (m, 1H), 3.80-4.05 (m, 4H), 4.25 (m, 1H), 5.45-5.51 (m, 1H), 5.79 (d, 1H), 6.77 (dd, 1H), 6.91 (t, 1H), 6.97 (d, 1H), 7.00 (s, 1H), 7.10 (t, 1H), 7.30 (s, 1H), 7.50 (d, 1H), 7.56 (d, 1H).
The compound was prepared from the compound of Example 55(c) (0.21 g), iodoethane (0.040 ml) and sodium hydride (60% dispersion in mineral oil, 0.039 g). Crude product was purified by chromatography (1st silica column, eluent 0-4% MeOH/DCM, 2nd C18-RP, eluent 0.1% HCOOH in H2O-ACN gradient). Yield 0.031 g as a mixture of enantiomers. 1H NMR (400 MHz, MeOH-d4): 1.23 (t, 3H), 2.33-2.45 (m, 2H), 2.65-2.78 (m, 1H), 2.80-2.87 (m, 1H), 3.02 (dd, 1H), 3.13 (dd, 1H), 3.54 (q, 2H), 4.19-4.36 (m, 4H), 4.75-4.88 (m, 1H), 5.87-5.96 (m, 1H), 7.03 (dd, 1H), 7.07 (s, 1H), 7.11 (s, 1H), 7.24-7.32 (m, 1H), 7.37-7.46 (m, 1H), 7.67 (d, 1H), 7.85-7.97 (m, 1H), 8.17-8.31 (m, 3H).
The compound was prepared from tert-butyl 3-formylcyclopent-3-enylcarbamate (0.60 g), 2-(1H-pyrazol-1-yl)ethylamine (0.631 g), tosylmethyl isocyanide (0.665 g) and DBU (0.856 ml). Crude product was purified by chromatography (silica column, eluent 0-2% MeOH/DCM). Yield 0.15 g as a mixture of enantiomers. 1H NMR (400 MHz, CDCl3): 1.46 (s, 9H), 2.36-2.49 (m, 1H), 2.49-2.61 (m, 1H), 2.96 (dd, 1H), 3.07 (dd, 1H), 4.33-4.45 (m, 3H), 4.45-4.56 (m, 2H), 4.85 (br, 1H), 5.69-5.79 (m, 1H), 6.18 (t, 1H), 6.97 (s, 2H), 6.99 (dd, 1H), 7.57 (dd, 1H).
The compound was prepared from the compound of Example 56(a) (0.19 g), and HCl, 4 M in dioxane (0.484 ml). Yield 0.19 g. Product was used as such in the next step.
The compound was prepared from the compound of Example 56(b) (0.19 g), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.114 g) and DIPEA (0.523 ml). Crude title product was triturated with ether. Yield 0.080 g. 1H NMR (400 MHz, CDCl3): 2.48-2.56 (m, 1H), 2.59-2.69 (m, 1H), 3.03-3.14 (m, 1H), 3.15-3.25 (m, 1H), 4.23-4.33 (m, 1H), 4.39-4.45 (m, 2H), 4.49-4.58 (m, 2H), 5.01 (d, 1H), 5.76-5.85 (m, 1H), 6.21 (t, 1H), 6.72 (dd, 1H), 6.89 (d, 1H), 6.98 (s, 1H), 7.05 (dd, 1H), 7.09 (d, 1H), 7.54-7.62 (m, 2H).
The compound was prepared from the compound of Example 56(c) (0.080 g), iodoethane (0.019 ml) and sodium hydride (60% dispersion in mineral oil, 0.016 g). Crude title compound was purified by chromatography (silica column, eluent 0-2% MeOH/DCM). Yield 0.038 g. 1H NMR (400 MHz, CDCl3): 1.25 (t, 3H), 2.66-2.77 (m, 1H), 2.80-2.90 (m, 1H), 2.95-3.15 (m, 2H), 3.47 (q, 2H), 4.41-4.48 (m, 2H), 4.54-4.60 (m, 2H), 4.68 (m, 1H), 5.88 (m, 1H), 6.20 (t, 1H), 6.82 (dd, 1H), 6.96-7.01 (m, 2H), 7.01-7.07 (m, 2H), 7.55-7.62 (m, 2H).
The compound was prepared from 4-(3-formylcyclopent-3-enylamino)-2-(trifluoromethyl)benzonitrile (0.35 g), 3-oxetanemethanamine, 3-methyl- (0.133 g), tosylmethyl isocyanide (0.293 g) and DBU (0.380 ml). Crude product was purified by chromatography (silica column, eluent 0-3% MeOH/DCM). Yield 0.25 g as a mixture of enantiomers. 1H NMR (400 MHz, CDCl3): 1.35 (s, 3H), 2.48-2.56 (m, 1H), 2.62-2.69 (m, 1H), 3.03-3.16 (m, 1H), 3.19-3.27 (m, 1H), 4.25-4.32 (m, 1H), 4.27 (s, 2H), 4.37 (d, 2H), 4.49 (dd, 2H), 4.74 (d, 1H), 5.77-5.82 (m, 1H), 6.71 (dd, 1H), 6.87 (d, 1H), 7.04 (s, 1H), 7.45 (d, 1H), 7.58 (d, 1H).
The compound was prepared from the compound of Example 57(a) (0.100 g), iodoethane (0.030 ml) and sodium hydride (60% dispersion in mineral oil, 0.020 g). Crude product was purified by chromatography (silica column, eluent 0-2% MeOH/DCM) to obtain the title compound as a mixture of enantiomers. Yield 0.045 g. 1H NMR (400 MHz, CDCl3): 1.24 (t, 3H), 1.38 (s, 3H), 2.63-2.78 (m, 1H), 2.82-2.90 (m, 1H), 2.92-3.05 (m, 1H), 3.06-3.15 (m, 1H), 3.46 (q, 2H), 4.28 (d, 2H), 4.38 (d, 2H), 4.55 (dd, 2H), 4.63-4.72 (m, 1H), 5.83-5.87 (m, 1H), 6.81 (dd, 1H), 6.98 (d, 1H), 7.05 (br. s., 1H), 7.48 (br. s., 1H), 7.57 (dd, 1H).
The compound was prepared from 4-(3-formylcyclopent-3-enylamino)-2-(trifluoromethyl)benzonitrile (0.355 g), 2-(2-methylthiazol-4-yl)ethanamine (0.189 g), tosylmethyl isocyanide (0.300 g) and DBU (0.380 ml). Crude product was purified by chromatography (silica column, eluent 0-2% MeOH/DCM) to obtain the title compound as a mixture of enantiomers. Yield 0.21 g. 1H NMR (400 MHz, CDCl3): 2.49-2.58 (m, 1H), 2.62-2.72 (m, 4H), 3.05-3.27 (m, 4H), 4.23-4.35 (m, 1H), 4.41 (t, 2H), 4.89 (d, 1H), 5.86-5.95 (m, 1H), 6.66 (s, 1H), 6.71 (dd, 1H), 6.87 (d, 1H), 6.98 (s, 1H), 7.29 (d, 1H), 7.58 (d, 1H).
The compound was prepared from the compound of Example 58(a) (0.210 g), iodoethane (0.057 ml) and sodium hydride (60% dispersion in mineral oil, 0.038 g). Crude product was purified by chromatography (silica column, eluent 0-1% MeOH/DCM) to obtain the title compound as a mixture of enantiomers. Yield 0.078 g. 1H NMR (400 MHz, MeOH-d4): 1.23 (t, 3H), 2.68 (s, 3H), 2.69-2.79 (m, 1H), 2.79-2.90 (m, 1H), 2.98-3.23 (m, 4H), 3.55 (q, 2H), 4.50 (t, 2H), 4.78-4.87 (m, 1H), 6.09-6.14 (m, 1H), 6.88-6.94 (m, 1H), 6.96 (s, 1H), 7.03 (dd, 1H), 7.08 (d, 1H), 7.45 (s, 1H), 7.66 (d, 1H).
4-(Ethyl(3-oxocyclohexyl)amino)-2-(trifluoromethyl)benzonitrile (2 g, 6.45 mmol) was dissolved in dry THF (50 ml) under N2-atmosphere. The solution was cooled to −78° C. and lithium bis(trimethylsilyl)amide (9.67 ml, 9.67 mmol) was added. The solution was stirred at −78° C. for 30 min and then N-phenyltrifluoromethanesulfonimide (2.76 g, 7.73 mmol) was added. The mixture was stirred at −78° C. for 2 h and was left to reach RT overnight. Reaction mixture was quenched by adding saturated NH4Cl, water and ethyl acetate. Water phase was extracted with ethyl acetate and the combined organic phases were dried and evaporated. The product was purified with flash-chromatography using ethyl acetate/heptane (3:7) as an eluent giving 1.205 g of the title compound. 1H NMR (400 MHz, DMSO-d6): 1.12 (t, 3H), 1.21-1.31 (m, 1H), 1.46-1.66 (m, 1H), 1.74-1.98 (m, 3H), 2.25-2.39 (m, 1H), 3.34-3.43 (m, 2H), 4.88-5.02 (m, 1H), 5.92 (s, 1H), 7.09-7.16 (m, 2H), 7.79 (d, 1H).
The compound of Example 59(a) (0.253 g, 0.57 mmol), the compound of Intermediate Example 1 (0.08 g, 0.57 mmol), tricyclohexylphosphine (3.85 mg, 0.014 mmol), Pd2(dba)3 (5.23 mg, 5.72 μmol) and potassium phosphate (0.206 mg, 0.97 mmol) were dissolved in mixture of 1,4-dioxane (3.5 ml) and water (1.25 ml) under N2-atmosphere. The mixture was heated in microwave (100° C., 2 h). A small amount of Pd2(dba)3 and tricyclohexylphosphine were added and the mixture was heated for another 2 h (100° C.). The mixture was then diluted with ethyl acetate (5 ml) and filtrated. The crude product was purified with preparative HPLC giving 10 mg of the title product as mixture of enantiomers. The enantiomers were separated with a chiral preparative HPLC using Daicel Chiralpak IA-colon (particle size 5 μm), eluent: line A: n-hexane+0.2% diethyl ether and line B: ethanol+0.2% diethyl ether. B=10%, 20 ml/min, 35 min, 300 nm. 22.24 mg of enantiomer 1 (rt 20.61 min) and 19.21 mg of enantiomer 2 (rt 24.48 min) were obtained. 1H NMR (400 MHz, MeOH-d4) 1.24 (t, 3H), 1.38 (t, 3H), 1.73-1.97 (m, 2H), 1.97-2.09 (m, 2H), 2.31-2.54 (m, 2H), 3.42-3.64 (m, 2H), 4.09 (q, 2H), 4.75 (dd, 1H), 5.79 (br. s., 1H), 6.91 (s, 1H), 7.08 (dd, 1H), 7.14 (d, 1H), 7.59-7.72 (m, 2H).
Compound of Example 59(a) (0.05 g, 0.1 mmol.), pyridin-4-yl boronic acid (0.021 g, 0.17 mmol), tricyclohexylphosphine (0.761 mg, 2.71 μmol), Pd2(dba)3 (1.04 mg, 1.13 μmol) and potassium phosphate (0.041 mg, 0,192 mmol) were dissolved in 1,4-dioxane (0.6 ml) and water (0.3 ml) under N2-atmosphere. The mixture was heated in microwave (100° C., 1 h). Ethyl acetate (30 ml) was added and the mixture was filtrated through a short plug of silica. The product was purified with column chromatography (100% EtOAc) giving 0.027 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.20-1.30 (m, 3H), 1.68-1.94 (m, 2H), 1.99-2.20 (m, 2H), 2.42-2.65 (m, 2H), 3.31-3.55 (m, 2H), 4.61 (m, 1H), 6.16 (dd, 1H), 6.85 (dd, 1H), 7.03 (d, 1H), 7.19-7.31 (m, 2H), 7.58 (d, 1H), 8.52-8.61 (m, 2H).
The compound of Example 60 (0.14 g, 0.377 mmol) was dissolved in methanol and hydrogenated in H-Cube (Pd/C, 20 bar, 20° C., 1 ml/min). The crude product was purified with flash chromatography (eluent 100% EtOAc). Yield 10 mg. 1H NMR (400 MHz, CDCl3): 1.15-1.30 (m, 3H), 1.36-1.52 (m, 1H), 1.53-1.73 (m, 3H), 1.89-2.16 (m, 4H), 2.74 (tt, 1H), 3.42 (q, 2H), 3.77-3.93 (m, 1H), 6.81 (dd, 1H), 6.96 (d, 1H), 7.15 (d, 2H), 7.58 (d, 1H), 8.48-8.58 (m, 2H).
Compound of Example 59(a) (0.1 g, 0.23 mmol), 1-methyl-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole (0.047 g, 0.23 mmol), tricyclohexylphosphine (1.52 mg, 5.43 μmol), Pd2(dba)3 (4.14 mg, 4.52 μmol) and potassium phosphate (0.144 g, 0.6 mmol) were dissolved in 1,4-dioxane (1 ml) under N2-atmosphere. The mixture was heated in microwave (100° C., 1 h). Ethyl acetate was added and the mixture was filtrated. The crude product was purified with column chromatography (100% EtOAc). Yield 0.020 g. 1H NMR (400 MHz, CDCl3): 1.19-1.29 (m, 3H), 1.68-1.92 (m, 2H), 1.99-2.10 (m, 2H), 3.34-3.56 (m, 2H), 3.89 (s, 3H), 4.55-4.66 (m, 1H), 5.77 (s, 1H), 6.17 (d, 1H), 6.85 (dd, 1H), 7.03 (d, 1H), 7.43 (d, 1H), 7.58 (d, 1H).
A mixture of 4-fluoro-2-(trifluoromethyl)benzonitrile (0.189 g, 1.0 mmol), HCl-salt of 3-(1H-imidazol-1-yl)cyclohex-2-enamine (0.20 g, 1.00 mmol), N-ethyl-N-isopropylpropan-2-amine (0.52 ml, 3.0 mmol) and DMSO (4 ml) were loaded in a microwave vial and heated in microwave at 90° C. for 2 h. The mixture was poured into a large amount of water and extracted in ethyl acetate. The organic phase was washed with water and brine, dried and evaporated. The crude product was purified with flash-chromatography using DCM-MeOH as an eluent. Yield 81 mg. 1H NMR (400 MHz, MeOH-d4): 1.65-1.80 (m, 1H), 1.83-2.08 (m, 3H), 2.50-2.67 (m, 2H), 4.37 (br. s., 1H), 5.92-6.01 (m, 1H), 6.90 (dd, 1H), 6.99-7.08 (m, 2H), 7.41 (s, 1H), 7.62 (d, 1H), 7.94 (s, 1H).
The compound was prepared from the compound of Example 63(a) (160 mg, 0.481 mmol) in DMF (2.5 ml), 60% sodium hydride in oil (30.8 mg, 0.77 mmol) and iodoethane (77 μl, 0.96 mmol). The crude product was purified with flash chromatography using 2.5% MeOH-DCM as a solvent. Yield 169 mg. 1H NMR (400 MHz, MeOH-d4): 1.25 (t, 3H), 1.72-1.88 (m, 1H), 1.88-2.16 (m, 3H), 2.52-2.77 (m, 2H), 3.41-3.62 (m, 2H), 4.79-4.84 (m, 1H), 5.93 (s, 1H), 7.05 (s, 1H), 7.09 (dd, 1H), 7.15 (d, 1H), 7.36-7.49 (m, 1H), 7.66 (d, 1H), 7.96 (s, 1H).
(4-(4-((4-Cyano-3-(trifluoromethyl)phenyl)(ethyl)amino)cyclopent-1-en-1-yl)-1H-imidazol-1-yl)methyl pivalate (0.05 g, 0.109 mmol) was mixed with 0.55 ml (5.43 mmol) of 1-bromobutan-2-one. The mixture was stirred at 50° C. overnight. Ammonia (7 M) in methanol (1 ml) was added and the mixture was stirred at RT for 1 h. Solvents were evaporated and heptane was added. The product was collected by filtering through short plug of silica first with heptanes, then with EtOAc and methanol. The product was purified with preparative HPLC. Yield 2.1 mg. 1H NMR (400 MHz, CDCl3): 1.11 (t, 3H), 1.16-1.28 (m, 3H), 2.43 (q, 2H), 2.57-2.70 (m, 1H), 2.82 (dd, 1H), 2.94 (dd, 1H), 3.08 (dd, 1H), 3.43 (q, 2H), 4.55-4.73 (m, 1H), 4.84 (s, 2H), 5.58 (s, 1H), 6.78 (dd, 1H), 6.96 (d, 1H), 7.08 (br. s., 1H), 7.50 (br. s., 1H), 7.58 (d, 1H).
Sodium hydride (55 mg, 1.387 mmol) was dissolved in dry DMF (4 ml) at 0° C. 4-((3-(1H-1,2,4-triazol-1-yl)cyclohexyl)amino)-2-(trifluoromethyl)benzonitrile (186 mg, 0.555 mmol) in dry DMF (1 ml) was added dropwise. The mixture was stirred at 0° C. for 1 h. Iodomethane (0.069 ml, 1.1 mmol) was added at 0° C. The mixture was stirred at 0° C. for 1 h and RT for 2 h. Ice-water (20 ml) was added and the product was extracted in EtOAc. The organic phase was washed with water and brine, dried and evaporated. The crude product was purified with flash chromatography using DCM-acetone as a solvent. Trans-diastereomer (42 mg): 1H NMR (400 MHz, CDCl3): 1.63-1.82 (m, 2H), 1.82-2.02 (m, 4H), 2.12-2.28 (m, 1H), 2.46 (d, 1H), 2.87-2.98 (m, 3H), 4.51 (ddd, 1H), 4.79 (br. s., 1H), 6.87 (dd, 1H), 7.24-7.35 (m, 1H), 7.56 (d, 1H), 8.03 (s, 1H), 8.18 (s, 1H). Cis-diastereomer (51 mg): 1H NMR (400 MHz, CDCl3): 1.53-1.73 (m, 2H), 1.77-1.96 (m, 2H), 2.07-2.36 (m, 4H), 2.95 (s, 3H), 3.83-3.97 (m, 1H), 4.36-4.48 (m, 1H), 6.86 (dd, 1H), 7.00 (d, 1H), 7.58 (d, 1H), 7.95 (s, 1H), 8.13 (s, 1H). The trans-enantiomers were separated from using chiral HPLC (Column: Chiralpak AD, 4.6×250 mm, 20 μm. Eluent: n-heptane/ethanol=70:30 (v:v), Q=2 ml/min) to yield 16.7 mg of enantiomer 1 (rt 4.9 min) and 16.21 mg of enantiomer 2 (rt 8.49 min). The cis-enantiomers were separated using chiral HPLC (Column: Chiralpak AD, 4.6×250 mm, 20 μm. Eluent: n-heptane/isopropanol=90:10 (v:v), Q=2 ml/min) to yield 13 mg of enantiomer 1 (rt 12.88 min) and 16.5 mg of enantiomer 2 (rt 18.99 min).
Copper iodide (3.3 g, 17.33 mmol) was dissolved in dry diethyl ether (40 ml) under N2-atmosphere at 0° C. Methyl lithium (3 molar, 9.81 ml, 29.4 mmol) was added and the mixture was stirred at 0° C. for 30 min and after that cooled to −78° C. A mixture of 3-(pyridin-3-yl)cyclohex-2-enone (0.51 g, 2.94 mmol) in 20 ml of dry ether was added dropwise. After stirring for 30 min at −78° C. the mixture was left to reach RT overnight. The reaction was quenched by adding NH4Cl and extracted in ethyl acetate. The organic phase was extracted with 1M HCl and the aqueous phase was basified with 5 M NaOH (aqueous). Extraction with ethyl acetate, drying and evaporation gave 0.47 g of the title product. [M+1]+=189.
A mixture of the compound of Example 66(a) (0.5 g, 2.64 mmol), hydroxylamine hydrochloride (0.193 g, 2.77 mmol) and pyridine (5 ml) was stirred at RT for 2 days. Pyridine was evaporated and the crude material (0.6 g) was used in the next step without further purification. [M+1]=204.
The compound of Example 66(b) (0.5 g, 2.448 mmol) was dissolved in methanol (50 ml) and hydrogenated in H-Cube (RaNi, 60 bar, 80° C., 1 ml/min). Solvents were evaporated giving 0.475 mg of the title product which was used in the next step without further purification. [M+1]=190.
4-Fluoro-2-(trifluoromethyl)benzonitrile (348 mg, 1.839 mmol), the compound of Example 66(c) (350 mg, 1.839 mmol), DIPEA (0.96 ml, 5.52 mmol) and DMSO (7 ml) were mixed and heated to 100° C. When the reaction was complete the mixture was poured in water and extracted in EtOAc. The organic phase was washed with water and brine, dried and evaporated. The product was purified with flash chromatography. Yield 0.22 g. [M+1]=360.
60% sodium hydride (0.061 g, 1.53 mmol) was washed with pentane. Dry DMF (20 ml) was added and the mixture was cooled to 0° C. The compound of Example 66(d) (220 mg, 0.612 mmol) in dry DMF (7 ml) was added and the mixture was stirred at 0° C. for 1 h. Iodoethane (0.098 ml, 1.224 mmol) was added and the mixture was stirred at 0° C. for 1 h and thereafter left to reach RT overnight. Iodoethane (1 eq.) and NaH (1 eq.) were added and the mixture was stirred for 2 h. Water was added and the product was extracted in EtOAc, dried and evaporated. The crude product was purified with preparative HPLC. Yield 52 mg. 1H NMR (400 MHz, CDCl3): 1.20-1.24 (m, 6H), 1.43-1.46 (m, 2H), 1.63-1.69 (m, 1H), 1.75-1.87 (m, 2H), 1.87-2.04 (m, 1H), 2.30-2.45 (dd, 2H), 3.39-3.43 (m, 3H), 6.57-6.63 (dd, 1H), 6.80 (dd, 1H), 7.29 (dd, 2H), 7.52 (d, 1H), 8.63 (d, 2H).
The compound was prepared as in Example 59(a) using 4-((2,2-dimethyl-5-oxocyclohexyl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile (317 mg, 0.94 mmol) as a starting material. Yield 212 mg. [M+1]=471. 5-((4-cyano-3-(trifluoromethyl)phenyl)(ethyl)amino)-4,4-dimethylcyclohex-1-en-1-yl trifluoromethanesulfonate was obtained as a side product in less than 20 mg.
The compound of Example 67(a) (0.091 g, 0.193 mmol), 3-pyridineboronic acid (0.036 g, 0.29 mmol), tricyclohexylphosphine (2.7 mg, 0.00967 mmol), Pd2(dba)3 (8.86 mg, 9.67 μmol) and potassium phosphate (0.070 mg, 0.329 mmol) were dissolved in 1,4-dioxane (1.2 ml) and water (0.6 l) under N2-atmosphere. The mixture was heated in microwave (100° C., 1 h). Ethyl acetate was added and the mixture was filtrated. The crude product was purified with preparative HPLC giving 15.9 mg of 4-((6,6-dimethyl-3-(pyridin-3-yl)cyclohex-2-en-1-yl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile 1H NMR (400 MHz, CDCl3): 0.97 (s, 3H), 1.08 (s, 3H), 1.20 (t, 3H), 1.31 (t, 1H), 1.63-1.81 (m, 2H), 2.37-2.66 (m, 2H), 3.33-3.63 (m, 2H), 4.47 (br. s., 1H), 5.93-6.07 (m, 1H), 6.93 (dd, 1H), 7.11 (d, 1H), 7.29 (dd, 1H), 7.59 (d, 1H), 7.71 (dt, 1H), 8.54 (d, 1H), 8.70 (br. s., 1H) and 5 mg of 4-((6,6-dimethyl-3-(pyridin-3-yl)cyclohex-3-en-1-yl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile 1H NMR (400 MHz, CDCl3): 1.02 (s, 3H), 1.11 (s, 3H), 1.16-1.35 (m, 3H), 2.04-2.27 (m, 1H), 2.28-2.43 (m, 1H), 2.58-2.72 (m, 1H), 2.74-2.92 (m, 1H), 3.46-3.71 (m, 2H), 4.22 (dd, 1H), 6.17 (d, 1H), 6.89-7.02 (m, 1H), 7.10 (d, 1H), 7.52-7.60 (m, 1H), 7.67 (dt, 1H), 8.51 (d, 1H), 8.67 (s, 1H).
The compound was prepared as in Example 59(a) using 4-(ethyl(3-oxocyclopentyl)amino)-2-(trifluoromethyl)benzonitrile (1 g, 3.38 mmol) as a starting material. Yield 0.90 g. [M+1]=429.
The compound was prepared using Suzuki-reaction conditions described in Example 67(b) starting from the compound of Example 68(a) (0.15 g, 0.35 mmol) and (4-methyl-3-pyridinyl)boronic acid (0.048 g, 0.35 mmol). Yield 50 mg after flash chromatography. The enantiomers were separated using chiral HPLC (Column: Chiralpak AD, 20×250 mm. Eluent: MTBE+0.2% DEA/isopropanol+0.2% DEA=95:5 (v:v), Q=2 ml/min) to yield 12 mg of enantiomer 1 (rt 6.93 min) and 12.6 mg of enantiomer 2 (8.61 min). 1H NMR (400 MHz, CDCl3): 1.15-1.34 (m, 3H), 1.75-1.93 (m, 1H), 2.40 (s, 3H), 2.62 (dtd, 1H), 2.76-2.96 (m, 2H), 3.35-3.60 (m, 2H), 5.17 (ddd, 1H), 5.85-5.93 (m, 1H), 6.88 (dd, 1H), 7.06 (d, 1H), 7.15 (d, 1H), 7.60 (d, 1H), 8.41 (d, 1H), 8.45 (s, 1H).
The compound was prepared following method described in Intermediate Example 1 using 2-chloro-1-methyl-1H-imidazole (1 g, 8.58 mmol) as a starting material. Yield 0.394 g. [M+1]=161.
The compound was prepared using Suzuki-reaction conditions of Example 67(b) starting from the compounds of Example 59(a) (0.30 g, 0.68 mmol) and Example 69(a) (0.163 g, 1.02 mmol). Yield 50 mg after flash chromatography. 1H NMR (400 MHz, CDCl3): 1.19-1.34 (m, 3H), 1.68-1.93 (m, 2H), 1.95-2.11 (m, 2H), 2.29-2.52 (m, 2H), 3.34-3.54 (m, 2H), 3.55-3.62 (m, 3H), 4.59 (br. s., 1H), 5.72 (s, 1H), 6.83-6.94 (m, 2H), 7.03 (d, 1H), 7.54-7.59 (m, 1H).
The compound was prepared as in Example 59(a) using 4-(methyl(3-oxocyclohexyl)amino)-2-(trifluoromethyl)benzonitrile (3 g, 10.13 mmol) as a starting material. Yield 1.74 g. [M+1]=429.
The compound was prepared using Suzuki-reaction conditions of Example 67(b) starting from the compounds of Example 70(a) (0.28 g, 0.66 mmol) and Example 69(a) (0.158 g, 0.985 mmol). Yield 58 mg after flash chromatography. 1H NMR (400 MHz, CDCl3): 1.62-1.76 (m, 1H), 1.76-1.94 (m, 1H), 1.96-2.10 (m, 2H), 2.28-2.47 (m, 2H), 2.97 (s, 3H), 3.61 (s, 3H), 4.69 (dd, 1H), 5.72 (s, 1H), 6.83-6.93 (m, 2H), 7.02 (d, 1H), 7.54-7.61 (m, 1H).
The compound of Example 70 (0.58 g, 0.15 mmol) was dissolved in 2.5 ml of dry methanol. The mixture was hydrogenated in H-Cube using 10% Pd/C as a catalyst. Flow rate 0.5 ml/min. Yield 42 mg. The enantiomers were separated using chiral HPLC (Column: Phenomex C6-Phenyl 30*100 mm P36. Eluent: 0.2% NH4OH/MeOH+0.2% NH4OH (50-95% of B) Q=30 ml/min) to yield 5.7 mg of enantiomer 1 (rt 6.58 min) and 4.8 mg of enantiomer 2 (rt 10.68 min). 1H NMR (400 MHz, CDCl3): 1.61-1.76 (m, 1H), 1.78-1.93 (m, 1H), 1.96-2.07 (m, 2H), 2.37-2.50 (m, 2H), 2.96 (s, 3H), 3.68 (s, 3H), 4.61-4.75 (m, 1H), 5.70 (s, 1H), 6.87 (dd, 1H), 7.00-7.07 (m, 2H), 7.41 (s, 1H), 7.56-7.66 (m, 1H).
3-(1H-imidazol-1-yl)cyclohexanone (0.695 g, 4.23 mmol) was dissolved in pyridine (4 ml). Hydroxylamine HCl (0.294 g, 4.23 mmol) was added and the mixture was stirred overnight. Next morning product was filtered off and dried in vacuum. Title compound was used as such in the following step. [M+H]+=180.
The compound of Example 72(a) was dissolved in MeOH (20 ml) and hydrogenated in H-Cube reactor (Raney Ni, controlled mode, 60 bar, 80° C., 1 ml/min) until most of the oxime had reduced to the corresponding amine. Solvent was evaporated in vacuo and the crude amine (a mixture of diastereomers) was used as such in the following step. [M+H]+=166.
A mixture of the compound of Example 72(b) (0.301 g, 1.82 mmol), DMSO (7 ml), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.265, 1.4 mmol) and DIPEA (0.61 ml, 0.45 g, 3.5 mmol) were heated to 120° C. for 6 h. The mixture was partitioned between water and EtOAc. Aqueous layer was extracted with EtOAc. Combined organic layers were washed with water, dried and concentrated. The crude product was purified by column chromatography. Yield 0.117 g. [M+H]+=335.
The compound of Example 72(c) (0.105 g, 0.31 mmol) was dissolved in DMF. NaH (0.019 mg, 0.47 mmol) was added at 0° C. followed by iodoethane (0.038 μl, 0.073 g, 0.47 mmol). The mixture was allowed to react at RT overnight. Next morning more of NaH (0.015 mg, 0.37 mmol) and iodoethane (0.038 μl, 0.073 g, 0.47 mmol) were added. The reaction was quenched with water and diluted with EtOAc. Aqueous layer was extracted with EtOAc. Combined organic layers were washed with water, dried and concentrated. Diastereomers were separated by preparative HPLC. Cis-diastereomer yield 0.032 g, 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.52-1.75 (3H, m),1.83-1.99 (2H, m), 2.06-2.14 (1H, m), 2.19-2.32 (2H, m), 3.42 (2H, q), 3.86 (1H, tt), 4.15 (1H, tt), 6.82 (1H, dd), 6.96 (1H, d), 6.99 (1H, s), 7.07 (1H, s), 7.55-7.61 (2H, m). [M+H]+=363. Enantiomers of a 60 mg sample of racemic cis-diastereomer were separated by chiral HPLC (Column: Daicel Chiralpak 20 mm×250 mm 5 μm, solvent A: n-hexane+0.1% DEA, solvent B: EtOH+0.1% DEA, isocratic B 15%, 20 ml/min) to obtain first eluting enantiomer (enantiomer 1), yield 0.025 g, rt 14 min and second eluting enantiomer (enantiomer 2), yield 0.024 g, rt 17 min. Trans-diastereomer yield 0.012 g, 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.66-1.89 (3H, m), 1.89-1.99 (2H, m), 2.05 (1H, m), 2.28-2.36 (1H, m), 2.38-2.46 (1H, m), 3.35-3.49 (2H, m), 3.73-3.82 (1H, m), 4.57 (1H, m), 6.63 (1H, dd), 6.85 (1H, d), 7.08 (1H, m), 7.19 (1H, m), 7.52 (1H, d), 7.68 (1H, s). [M+H]+=363. Enantiomers of a 0.103 g sample of racemic trans-diastereomer were separated by chiral HPLC (Column: Daicel Chiralpak 20 mm×250 mm 5 μm, solvent A: n-hexane+0.1% DEA, solvent B: EtOH+0.1% DEA, isocratic B 20%, 20 ml/min) to obtain first eluting enantiomer (enantiomer 1), rt 13 min and second eluting enantiomer (enantiomer 2), rt 14 min.
1,3-Cyclohexanediamine (a 4:1 mixture of cis:trans-isomers) (0.36 ml, 0.34 g, 3.0 mmol), DMSO (20 ml), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.189 g, 1.0 mmol) and DIPEA (0.52 ml, 0.39 g, 3.0 mmol) were mixed. The mixture was heated to 100° C. for 4 h after which the reaction was quenched with the addition of water. The aqueous phase was extracted with EtOAc. Combined organic layers were washed with water, brine, dried and concentrated. Crude product was used as such in the following step. [M+H]+=284.
The compound of Example 73(a) was dissolved in DMF (2 ml) and propionaldehyde (0.082 g, 1.41 mmol) was added. The solution was stirred at RT for 1.5 h before tosylmethyl isocyanide (0.184 g, 0.94 mmol) and K2CO3 (0.13 g, 0.94 mmol) were added. The mixture was stirred at RT overnight. The reaction was quenched with water and diluted with EtOAc. The aqueous layer was extracted with EtOAc. Combined organic layers were washed with water, dried and concentrated. Crude product was purified by column chromatography (134 mg, impure). [M+H]+=363.
The compound was prepared from the compound of Example 73(b) (134 mg), DMF (2 ml), NaH (17.6 mg, 0.44 mmol) and iodoethane (0.041 ml, 0.081 g, 0.52 mmol). The title compound was purified by preparative HPLC. Yield: 0.0081 mg (cis-isomer). 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.30 (3H, t), 1.54-1.64 (2H, m), 1.65-1.73 (1H, m), 1.83 (1H, m), 1.94-2.02 (1H, m), 2.07-2.26 (3H, m), 2.53-2.61 (2H, m), 3.42 (2H, q), 3.77-3.87 (1H, m), 3.95 (1H, tt), 6.76-6.84 (2H, m), 6.95 (1H, d), 7.54 (1H, s), 7.60 (1H, d). [M+H]+=391.
A flask flushed with N2 was charged with 5,5-dimethylcyclohexane-1,3-dione (2.8 g, 20 mmol), DMF (2 ml) and DCM (40 mol) and cooled to 0° C. Oxalyl chloride (2 ml, 2.96 g, 23.3 mmol) in DCM (10 ml) was added. Ice bath was removed and the solution was allowed to react at RT overnight. The reaction was quenched with saturated NaHCO3. The aqueous layer was extracted with DCM. Combined organic layers were washed with brine, dried and concentrated. Title compound was used as such in the following step. Yield: 2.69 g. [M]+=158.
A mixture of the compound of Example 74(a) (2.69 g, 17 mmol), toluene (10 ml), imidazole (2.31 g, 34 mmol), KHCO3 (0.34 g, 3.4 mmol) and triethylamine (12 ml, 8.7 g, 86 mmol) was heated to 160° C. in a microwave reactor. Within an hour the reaction was complete. The mixture was diluted with water and DCM. Aqueous layer was extracted with DCM. Combined organic layers were washed with water, brine, dried and concentrated. Title compound was used as such in the following step. Yield: 2.77 g. [M+H]+=191.
Flask was charged with the compound of Example 74(b) (0.76 g, 4 mmol) and MeOH (15 ml) and cooled to 0° C. CeCl3.7H2O (1.64 g, 4.4 mmol) was added and the mixture was stirred for 5 min. NaBH4 (0.182 g, 4.8 mmol) was then added. The mixture was stirred for 30 min and then quenched with water and saturated NH4Cl. The aqueous layer was extracted with EtOAc. Combined organic layers were washed with brine, dried and concentrated. Title compound was used as such in the following step. Yield 0.68 g. [M+H]+=193.
Flask flushed with N2 was charged with the compound of Example 74(c) (0.62 g, 3.2 mmol), toluene (15 ml), THF (15 ml) and DPPA (1.04 ml, 1.33 g, 4.85 mmol). It was cooled to 0° C. and DBU (0.83 ml, 0.84 g, 5.5 mmol) was added. The mixture was warmed to RT slowly and left overnight. The reaction was quenched with water. The aqueous layer was extracted with EtOAc. Combined organic extracts were treated with 1M HCl and phases were separated. The acidic aqueous layer was basified with 2 M NaOH solution and extracted with EtOAc. Combined EtOAc layers were washed with brine, dried and concentrated. Crude product was purified by column chromatography. Yield 0.313 g. 1H NMR (400 MHz, CDCl3): 1.05 (3H, s), 1.16 (3H, s), 1.53 (1H, dd), 1.89 (1H, dd), 2.16-2.25 (1H, m), 2.36-2.45 (1H, m), 4.16 (1H, m), 5.77-5.81 (1H, m), 7.10-7.12 (1H, m), 7.13-7.15 (1H, m), 7.72 (1H, s). [M+H]+=218.
A flask was charged with polymer-supported PPh3 (3 mmol/g, 0.951 g, 2.85 mmol), MeOH (15 ml) and the compound of Example 74(d) (0.31 g, 1.42 mmol). The mixture heated to reflux for 4 h. The resin was filtered off and the residue was evaporated to dryness. Crude title compound (0.194 g) was used as such in the following step. [M+H]+=192.
A mixture of the compound of Example 74(e), DMSO (2 ml), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.189 g, 1 mmol) and DIPEA (0.45 ml, 0.33 g, 2.6 mmol) was heated to 100° C. for 4 h. The mixture was allowed to cool to RT and water was added. The aqueous layer was extracted with EtOAc. Combined organic phases were washed with water, dried and concentrated. Crude product was purified by column chromatography. Yield 0.229 g. [M+H]+=361.
A flask flushed with N2 was charged with the compound of Example 74(f) (229 g, 0.63 mmol) and DMF (4 ml) and cooled to 0° C. NaH (0.041 g, 1.02 mmol) was added and the mixture was allowed to react for 10 min before iodoethane (0.066 ml, 0.129 g, 0.82 mmol) was added. Ice bath was removed and the mixture was allowed to warm to RT. The reaction was complete within an hour. Water was added and the aqueous layer was extracted with EtOAc. Combined organic layers were washed with water, dried and concentrated. Crude product was purified by preparative HPLC to yield 0.146 g of the title compound. Enantiomers were separated by chiral HPLC (Column: Daicel Chiralpak IA 20 mm×250 mm 5 μm, solvent A: n-hexane+0.1% DEA, solvent B: EtOH+0.1% DEA, isocratic B 3%, 20 ml/min) to obtain enantiomer 1 (yield 0.057 g, rt 48 min) and enantiomer 2 (yield 0.0527 g, rt 54 min). 1H NMR (400 MHz, CDCl3): 1.15 (3H, s), 1.18 (3H, s), 1.25 (3H, t), 1.52-1.61 (1H, m), 1.71-1.80 (1H, m), 2.24 (1H, m), 2.51 (1H, m), 3.40 (2H, m), 4.62-4.71 (1H, m), 5.71-5.76 (1H, m), 6.85 (1H, dd), 7.02 (1H, d), 7.09-7.14 (2H, m), 7.59 (1H, d), 7.72 (1H, s). [M+H]+=389.
3-Bromopyridine (237 mg, 1.5 mmol) was dissolved in dry THF (6 ml). The solution was cooled to −78° C. and n-butyllithium (1.6 M in hexanes, 1.0 ml, 1.6 mmol) was added. The mixture was allowed to react for 30 min before 2-chloro-4-(ethyl(3-oxocyclohexyl)amino)benzonitrile (277 mg, 1.0 mml) dissolved in THF (4 ml) was added. The mixture was warmed to RT and left overnight. Next day the reaction was quenched with saturated NH4Cl solution and diluted with water and EtOAc. The aqueous layer was extracted with EtOAc. Combined organic layers were washed with brine, dried and finally concentrated. Crude product was purified by column chromatography to yield 164 mg of the title compound as mixture of diastereomers. [M+H]+=356.
The compound of Example 75(a) (164 mg, 0.46 mmol) was dissolved in concentrated H2SO4 (2.5 ml) at 0° C. The mixture was allowed to react at 0° C. for 30 min and the solution allowed to warm to RT. Reaction was complete in 1.5 h. The mixture was poured in ice cold water. Aqueous phase was made basic (pH >10) and extracted with EtOAc. Combined organic layers were dried and concentrated. Crude product was purified by column chromatography. Yield 99 mg. 1H NMR (400 MHz, CDCl3): 1.27 (3H, t), 1.82-1.94 (1H, m), 1.95-2.03 (1H, m), 2.43-2.62 (4H, m), 3.42 (2H, m), 4.03-4.13 (1H, m), 6.16-6.21 (1H, m), 6.64 (1H, dd), 6.77 (1H, d), 7.22-7.26 (1H, m), 7.42 (1H, d), 7.60-7.65 (1H, m), 8.49 (1H, dd), 8.64 (1H, d). [M+H]+=338.
The compound of Example 75 (100 mg, 0.296 mmol) was dissolved in 1 M HCl/EtOH (1:3, 4 ml) and hydrogenated in H-Cube reactor (10% Pd/C, full H2, 50° C., 1 ml/min). EtOH was evaporated and the residue was partitioned between saturated NaHCO3 solution and EtOAc. Aqueous layer was extracted with EtOAc. Combined organic layers were washed with brine, dried and concentrated. Crude product was purified by preparative HPLC to yield cis-diastereomer of the title compound (7.3 mg), 1H NMR (400 MHz, CDCl3): 1.20 (3H, t), 1.42-1.72 (4H, m), 1.90-2.11 (4H, m), 2.76 (1H, tt), 3.37 (2H, q), 3.80 (1H, tt), 6.59 (1H, dd), 6.71 (1H, d), 7.22-7.28 (1H, m), 7.41 (1H, d), 7.54 (1H, dt), 8.48 (1H, dd), 8.52 (1H, d). [M+H]+=340, and trans-diastereomer of the title compound (9.3 mg), 1H NMR (400 MHz, CDCl3): 1.20 (3H, t), 1.62-1.83 (3H, m), 1.83-1.91 (2H, m), 2.02 (1H, ddd), 2.18-2.26 (1H, m), 2.28-2.36 (1H, m), 3.32-3.44 (3H, m), 3.54-3.64 (1H, m), 6.36 (1H, dd), 6.46 (1H, d), 7.33 (1H, d), 7.38 (1H, dd), 7.70-7.77 (1H, m), 8.54 (1H, d), 8.68 (1H, d). [M+H]+=340.
To a stirred solution of 3-aminocyclohexanol (40.0 g, 0.348 mol) in DCM (350 ml) were added imidazole (71.0 g, 1.042 mol) and TBDMS-Cl (78.0 g, 0.520 mol) at 0° C. The mixture was allowed to stir at RT for 24 h. The reaction was quenched by H2O, extracted with DCM, washed with brine solution, dried, filtered and concentrated to give title compound. Yield 78.1 g (crude); [M+H]+=230.
To a stirred solution of the compound of Example 77(a) (78.1 g, 0.341 mol) in DCM (350 ml) were added Et3N (94.0 ml, 0.681 mol) and Boc2O (74.1 ml, 0.341 mol) at 0° C. The mixture was stirred at RT for 6 h. It was poured into ice water, extracted with EtOAc, washed with brine solution, dried, filtered and concentrated. The residue was purified by column chromatography. Yield 26.0 g. [M+H]+=330.
To a stirred solution of NaH (18.9 g, 0.474 mol) in DMF (350 ml) was added the compound of Example 77(b) (26.0 g, 0.079 mol) in DMF (20 ml). The mixture was stirred at 0° C. for 30 min and EtBr (14.7 ml, 21.5 g, 0.198 mol) was added. The mixture was warmed to 70° C. for 16 h and quenched with ice water, extracted with EtOAc, washed with brine solution, dried, filtered and concentrated. The crude residue was purified by column chromatography. Yield 19.5 g. [M+H]+=358.
The compound of Example 77(c) (7.15 g, 20 mmol) was dissolved in THF (20 ml). TBAF (1 M in THF, 24 ml, 24 mmol) was added and the solution was allowed to react for 120 h at RT. Solvents were evaporated and the residue purified by filtration through a pad of silica. Yield 4.66 g. [M+H]+=244.
The compound of Example 77(d) (4.5 g, 18.5 mmol) was dissolved in dry DMSO (35 ml). The solution was cooled on an ice bath and triethylamine (15.46 ml, 11.23 g, 111 mmol) followed by sulphur dioxide-pyridine complex (7.36 g, 46.2 mmol) were added. The mixture was stirred on ice bath for a further 10 min before it was allowed to warm to RT. Reaction was complete within 1 h. Water and EtOAc were added. Phases were separated and the aqueous layer was extracted with EtOAc. Combined organic layers were washed with water, dried and concentrated. Crude ketone (4.31 g) was used as such in the following step. [M+H]+=242.
Title compound was prepared from 4-Bromopyridine hydrochloride (1.011 g, 5.2 mmol), n-butyllithium (1.6 M in hexanes, 7.0 ml, 11.2 mmol) and the compound of Example 77(e) (0.965 g, 4 mmol) as described in Example 75(a). Yield: 0.269 g. [M+H]+=321.
Title compound was prepared from the compound of Example 77(f) (0.250 g, 0.78 mmol) and concentrated sulphuric acid (4 ml) as described in Example 75(b). Yield: 0.101 g. 1H NMR (400 MHz, CDCl3): 1.17 (3H, t), 1.49 (1H, m), 1.93-2.02 (1H, m), 2.18-2.34 (2H, m), 2.34-2.44 (1H, m), 2.67 (1H, m), 2.78 (2H, m), 2.90-2.99 (1H, m), 6.34 (1H, m), 7.23-7.27 (2H, m), 8.48-8.53 (2H, m).
The compound of Example 77(g) (100 mg, 0.50 mmol) was dissolved in DMSO (2 ml). 4-Fluoro-2-(trifluoromethyl)benzonitrile (85 mg, 0.45 mmol) followed by cesium carbonate (220 mg, 0.68 mmol) were added. The solution was kept at 100° C. for 9 h. The solution was partitioned between water and DCM and the aqueous layer was extracted with DCM. Combined organic layers were washed with water, dried and concentrated. Crude product was purified by preparative chromatography. Yield 2.5 mg. 1H NMR (400 MHz, CDCl3): 1.30 (3H, t), 1.85-1.97 (1H, m), 1.99-2.07 (1H, m), 2.40-2.69 (4H, m), 3.38-3.55 (2H, m), 4.14 (1H, m), 6.43-6.48 (1H, m), 6.86 (1H, dd), 7.01 (1H, d), 7.31-7.35 (2H, m), 7.59 (1H, d), 8.54-8.59 (2H, m). [M+H]+=372.
tert-Butyl ethyl(3-oxocyclohexyl)carbamate (241 mg, 1 mmol) was dissolved in dry THF (6 ml). The solution was cooled to −78° C. and lithium bis(trimethylsilyl)amide (1 M in THF, 1.5 ml, 1.5 mmol) was added. The solution was allowed to react for 30 min before N-phenyltrifluoromethanesulfonimide (429 mg, 1.2 mmol) dissolved in THF (3 ml) was added. The solution was kept at −78° C. for another 2 h before it was allowed to warm to RT. The completed reaction was quenched with saturated NH4Cl solution and diluted with water and EtOAc. Aqueous layer was extracted with EtOAc. Combined organic layers were dried and concentrated. Crude product was purified by column chromatography to yield the title compounds as a mixture of double bond regioisomers (368 mg). [M+H]+=374.
The product of Example 78(a) (360 mg, 0.964 mmol) was dissolved in 1,4-dioxane (5 ml). To this solution were added 2-methoxy-5-pyridineboronic acid (192 mg, 1.253 mmol), Pd(PPh3)4(28 mg, 0.02 mmol) and potassium phosphate (307 mg, 1.45 mmol) dissolved in water (2 ml). Solution was heated to 80° C. for 3 h before it was allowed to cool to RT. Aqueous layer was basified with 2 M NaOH solution, diluted with water and extracted with EtOAc. Combined organic layers were washed with brine, dried and concentrated. Crude product was purified by column chromatography to yield the title compounds as a 3:2 mixture of double bond regioisomers (166 mg). [M+H]+=333.
The product of Example 78(b) (165 mg, 0.50 mmol) was dissolved in DCM (2 ml) and cooled to 0° C. on an ice bath. Trifluoroacetic acid (0.6 ml, 921 mg, 8.1 mmol) was added and the solution was allowed to react at 0° C. for another 10 min before it was allowed to warm to RT. The reaction was quenched with saturated NaHCO3 solution. Phases were separated and the aqueous layer was extracted with DCM. Combined organic layers were dried and concentrated to yield title compounds as a 3:2 mixture of double bond regioisomers (119 mg). [M+H]+=233.
The product of Example 78(c) (136 mg, 0.59 mmol) was dissolved in DMSO (2 ml). To this solution were added 2-chloro-4-fluorobenzonitrile (91 mg, 0.59 mmol) and DIPEA (0.3 ml, 223 mg, 1.72 mmol). The solution was heated to 120° C. and allowed to react overnight. The mixture was quenched with water and the aqueous layer was extracted with EtOAc. Combined organic layers were washed with water, dried and concentrated. Crude product was purified by preparative HPLC to obtain 2-Chloro-4-(ethyl(3-(4-methoxypyridin-3-yl)cyclohex-3-en-1-yl)amino)benzonitrile (5.6 mg), 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.86-2.03 (2H, m), 2.38-2.52 (3H, m), 2.52-2.63 (1H, m), 3.31-3.48 (2H, m), 3.90 (3H, s), 3.99-4.10 (1H, m), 5.78-5.84 (1H, m), 6.64 (1H, dd), 6.76-6.82 (2H, m), 7.42 (1H, d), 8.23-8.30 (1H, m), 8.37-8.46 (1H, m), [M+H]+=368, and 2-Chloro-4-(ethyl(3-(4-methoxypyridin-3-yl)cyclohex-2-en-1-yl)amino)benzonitrile (7.6 mg): 1H NMR (400 MHz, CDCl3): 1.18-1.27 (3H, m), 2.00 (2H, br. s.), 1.67-1.90 (2H, m), 2.33-2.54 (2H, m), 3.32-3.55 (2H, m), 3.89 (3H, br. s.), 4.48-4.58 (1H, m), 5.67-5.74 (1H, m), 6.65 (1H, d), 6.81-6.86 (1H, m), 6.76-6.81 (1H, m), 7.41 (1H, d), 8.27 (1H, br. s.), 8.42 (1H, br. s.). [M+H]+=368. Enantiomers of 2-chloro-4-(ethyl(3-(4-methoxypyridin-3-yl)cyclohex-2-en-1-yl)amino)benzonitrile were separated by chiral HPLC (Column: Daicel Chiralpak IA 20 mm×250 mm 5 pun, solvent A: n-hexane+0.1% DEA, solvent B: EtOH+0.1% DEA, isocratic B 10%, 20 ml/min) to obtain enantiomer 1 (yield 0.032 g, rt 28 min) and enantiomer 2 (yield 0.033 g, rt 31).
Title compound was prepared from 3-bromo-4-methylpyridine (1.342 g, 7.8 mmol), n-butyllithium (1.6 M in hexanes, 5.5 ml, 8.8 mmol) and 2-chloro-4-(ethyl(3-oxocyclohexyl)amino)benzonitrile (1.661 g, 6 mmol) as described in Example 75(a). Yield: 0.722 g. [M+H]+=370.
Title compound was prepared from the compound of Example 79(a) (0.840 g, 2.27 mmol) and concentrated H2SO4 (9.0 ml) as described in Example 75(b). Yield 0.799 g. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.84-2.06 (2H, m), 2.32 (3H, s), 2.34-2.52 (4H, m), 3.31-3.47 (2H, m), 4.02-4.12 (1H, m), 5.65-5.71 (1H, m), 6.62 (1H, dd), 6.75 (1H, d), 7.09 (1H, d), 7.43 (1H, d), 8.30 (1H, s), 8.36 (1H, d). [M+H]+=352.
Title compound was prepared from 4-((3-hydroxycyclohexyl)amino)-2-(trifluoromethyl)benzonitrile (0.569 g, 2 mmol), sulfur trioxide-pyridine complex (0.637 mg, 4 mmol), triethylamine (2 ml, 1.452 g, 14.4 mmol) and DMSO (5 ml) as described in Example 77(b). Yield 0.560 g. [M+H]+=283.
A solution of 4-iodo-1-trityl-1H-imidazole (0.916 g, 2.100 mmol) and THF (12 ml) was cooled to −78° C. n-Butyllithium (1.6 M in hexanes, 2.0 ml, 3.2 mmol) was added and the solution was stirred for 1 hour. The compound of Example 80(a) (0.282 g, 1.0 mmol) dissolved in THF (2 ml) was added and the mixture was stirred at −78° C. for 45 min and then warmed to RT. After 70 h the reaction was quenched with saturated NH4Cl solution and diluted with water. Aqueous layer was extracted with EtOAc. Combined organic layers were dried and concentrated [M+H]+=593. The impure alcohol intermediate from the reaction above was dissolved in concentrated H2SO4 (3.0 ml) at 0° C. Stirring at 0° C. was continued for 30 min and the mixture was allowed to warm to RT. The reaction was complete within 4 h after which it was quenched and worked as above. Crude material was purified by column chromatography to afford the title compound (0.126 g). 1H NMR (400 MHz, CDCl3): 1.69-1.80 (1H, m), 1.95-2.04 (1H, m), 2.27-2.41 (3H, m), 2.79-2.89 (1H, m), 3.82-3.93 (1H, m), 4.76 (1H, d), 6.31-6.40 (1H, m), 6.71 (1H, dd), 6.87 (1H, d), 6.95 (1H, s), 7.53 (1H, d), 7.60 (1H, d), 10.03 (br. s., 1H). [M+H]+=333.
The title compound was prepared from the compound of Example 80 (60 mg, 0.18 mmol) as described in Example 76. Crude product was purified by preparative HPLC. Yield 22.1 mg (5:2 mixture of diastereomers). Major diastereomer: 1H NMR (400 MHz, MeOH-d4): 1.23-1.48 (2H, m), 1.54-1.68 (1H, m), 1.68-1.85 (1H, m), 1.87-2.02 (1H, m), 2.02-2.15 (2H, m), 2.35 (1H, m), 2.88 (1H, tt), 3.54 (1H, tt), 6.84 (1H, m), 6.97 (1H, d), 7.01-7.11 (2H, m), 7.58 (1H, d), 8.15 (1H, s), 8.41 (1H, br. s.). [M+H]+=335.
The compound was prepared from 3-Bromo-5-methoxypyridine (0.530 g, 2.8 mmol), n-butyllithium (1.6 M in hexanes, 1.9 ml, 3.0 mmol) and 2-chloro-4-(ethyl(3-oxocyclohexyl)amino)benzonitrile (0.600 g, 2.17 mmol) as described in Example 75(a). Yield 0.501 g (a mixture of 5-methoxypyridin-3-yl and 3-methoxypyridin-4-yl isomers). [M+H]+=386.
Title compounds were prepared from the compound of Example 82(a) (0.500 g, 1.3 mmol) and concentrated sulphuric acid (4 ml) as described in Example 75(b). Isomers were separated by preparative HPLC to obtain 2-Chloro-4-(ethyl(3-(5-methoxypyridin-3-yl)cyclohex-3-en-1-yl)amino)benzonitrile (0.093 g), 1H NMR (400 MHz, CDCl3): 1.27 (3H, t), 1.89 (1H, m), 1.95-2.03 (1H, m), 2.43-2.52 (2H, m), 2.53-2.60 (2H, m), 3.35-3.48 (2H, m), 3.87 (3H, s), 4.07 (1H, m), 6.16-6.21 (1H, m), 6.64 (1H, dd), 6.76 (1H, d), 7.12 (1H, dd), 7.40-7.44 (1H, m), 8.20 (1H, d), 8.26 (1H, d), [M+H]+=368, and 2-Chloro-4-(ethyl(3-(3-methoxypyridin-4-yl)cyclohex-3-en-1-yl)amino)benzonitrile (0.026 g), 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.85-2.02 (2H, m), 2.42-2.62 (4H, m), 3.31-3.49 (2H, m), 3.94 (3H, s), 3.98-4.09 (1H, m), 5.90-5.97 (1H, m), 6.64 (1H, dd), 6.78 (1H, d), 7.07 (1H, d), 7.42 (1H, d), 8.21-8.31 (2H, m), [M+H]+=368.
The compound was prepared from 2-Chloro-4-(ethyl(3-(5-methoxypyridin-3-yl)cyclohex-3-en-1-yl)amino)benzonitrile of Example 82 (49 mg, 0.13 mmol) and EtOH (5 ml) as described in Example 76. Crude was purified by preparative HPLC to obtain cis-diastereomer (9.7 mg), 1H NMR (400 MHz, CDCl3): 1.19 (3H, t), 1.38-1.50 (1H, m), 1.53-1.70 (3H, m), 1.89-2.10 (4H, m), 2.75 (1H, tt), 3.37 (2H, q), 3.74-3.83 (1H, m), 3.87 (3H, s), 6.59 (1H, dd), 6.71 (1H, d), 7.02-7.05 (1H, m), 7.41 (1H, d), 8.13 (1H, d,) 8.17 (1H, d), [M+H]+=370, and trans-diastereomer (5.1 mg), 1H NMR (400 MHz, CDCl3): 1.20 (3H, t), 1.62-1.88 (5H, m), 1.96-2.04 (1H, m), 2.16-2.24 (1H, m), 2.25-2.32 (1H, m), 3.32-3.43 (3H, m), 3.58-3.71 (1H, m), 3.89 (3H, s), 6.38 (1H, dd), 6.47 (1H, d), 7.17-7.19 (1H, m), 7.33 (1H, d), 8.23 (1H, d), 8.28 (1H, d), [M+H]+=370.
Title compounds were prepared from 3-bromo-5-methoxypyridine (0.978 g, 5.2 mmol), n-butyllithium (1.6 M in hexanes, 3.5 ml, 5.6 mmol) and tert-butyl ethyl(3-oxocyclohexyl)carbamate (0.965 g, 4 mmol) as described in Example 75(a). Yield 0.720 g. [M+H]+=351.
Title compounds were prepared from the product of Example 84(a) (0.600 g, 1.71 mmol) and concentrated H2SO4 (10 ml) as described in Example 75(b). Yield 0.373 g. [M+H]+=333.
Title compounds were prepared from the product of Example 84(b) (0.209 g, 0.90 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.142 g, 0.75 mmol) and cesium carbonate (0.489 g, 1.50 mmol) as described in Example 77(e). Isomers were separated by preparative HPLC to obtain 4-(Ethyl(3-(5-methoxypyridin-3-yl)cyclohex-3-en-1-yl)amino)-2-(trifluoromethyl)benzonitrile (31.7 mg), 1H NMR (400 MHz, CDCl3): 1.29 (3H, t), 1.85-2.04 (2H, m), 2.40-2.61 (4H, m), 3.41-3.53 (2H, m), 3.88 (3H, s), 4.14 (1H, m), 6.19-6.23 (1H, m), 6.86 (1H, dd), 7.01 (1H, d), 7.13-7.17 (1H, m), 7.58 (1H, d), 8.20 (1H, d), 8.26 (1H, d), [M+H]+=402, and 4-(Ethyl(3-(3-methoxypyridin-4-yl)cyclohex-3-en-1-yl)amino)-2-(trifluoromethyl)benzonitrile (10.8 mg), 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 1.88-2.04 (2H, m), 2.44-2.64 (4H, m), 3.37-3.54 (2H, m), 3.92 (3H, s), 4.05-4.15 (1H, m), 5.91-5.97 (1H, m), 6.85 (1H, dd), 7.02 (1H, d), 7.06 (1H, d), 7.58 (1H, d), 8.21 (1H, d), 8.25 (1H, s), [M+H]+=402.
Title compounds were prepared from 4-(ethyl(3-(pyridin-3-yl)cyclohex-3-en-1-yl)amino)-2-(trifluoromethyl)benzonitrile (245 mg, 0.66 mmol), EtOH (6 ml) and acetic acid (0.15 ml) as in Example 76. Crude product was purified by preparative HPLC to obtain cis-diastereomer (11.3 mg), 1H NMR (400 MHz, CDCl3): 1.21 (3H, t), 1.40-1.53 (1H, m), 1.56-1.65 (2H, m), 1.67-1.71 (1H, m), 1.90-2.12 (4H, m), 2.77 (1H, tt), 3.43 (2H, q), 3.86 (1H, tt), 6.81 (1H, dd), 6.96 (1H, d), 7.24 (1H, dd), 7.53 (1H, dt), 7.57 (1H, d), 8.48 (1H, dd), 8.52 (1H, d), [M+H]+=374, and trans-diastereomer (8.7 mg), 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.67-1.92 (5H, m), 2.04 (1H, m), 2.18-2.25 (1H, m), 2.29-2.36 (1H, m), 3.37-3.48 (3H, m), 3.64-3.73 (1H, m), 6.56 (1H, dd), 6.74 (1H, d), 7.32 (1H, dd), 7.48 (1H, d), 7.66-7.71 (1H, m), 8.53 (1H, d), 8.66 (1H, s), [M+H]+=374.
Title compound was prepared from 3-(1H-imidazol-1-yl)cyclopentanone (1.79 g, 9.8 mmol), hydroxylamine hydrochloride (0.7 g, 10.1 mmol) and pyridine (10 ml) as described in Example 72(a). Crude oxime was purified by filtrating through a pad of silica. Yield 1.40 g. [M+H]+=166.
A flask was charged with the compound of Example 86(a) (1.40 g, 8.5 mmol) and THF (30 ml). The flask was placed on ice bath and LiAlH4 (0.516 g, 13.6 mmol) was added in portions. Ice bath was removed and the mixture was heated to 60° C. for 4 h. The reaction mixture was quenched with water/2 M NaOH/water and filtered. Organic phase was dried and concentrated. The residue was partitioned between water and EtOAc. Organic layer was washed with water and brine. Combined aqueous layers were concentrated. The residue was treated with MeOH. The alcoholic layer was concentrated to give the title compound (0.33 g, a mixture of diastereomers), which was used as such in the following step. [M+H]+=152.
Title compound was prepared from the compound of Example 86(b) (0.33 g, 2.18 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.66 g, 3.49 mmol), DIPEA (1.5 ml, 1.11 g, 8.6 mmol) and DMSO (5 m) as described in Example 72(c). The crude product was purified by column chromatography. Yield 0.171 g. [M+H]+=321.
Title compounds were prepared from the compound of Example 86(c) (0.17 g, 0.53 mmol), NaH (0.03 g, 0.74 mmol) and iodoethane (0.055 ml, 0.108 g, 0.69 mmol) as described in Example 72(d). All four enantiomers were separated by chiral HPLC (Column: Daicel Chiralpak IA 20 mm×250 mm 5 μm, eluent A: n-hexane+0.1% DEA, eluent B: EtOH+0.1% DEA, isocratic B 10%, 20 ml/min) to obtain enantiomer 1 (yield 8.4 mg, rt 28 min) and enantiomer 2 (yield 4.9 mg, rt 51 min) of the cis-diastereomer, 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.89-2.05 (2H, m), 2.07-2.16 (1H, m), 2.16-2.27 (1H, m), 2.34-2.45 (1H, m), 2.64 (1H, m), 3.42 (2H, q), 4.26-4.38 (1H, m), 4.51-4.62 (1H, m), 6.85 (1H, dd), 7.00 (2H, d), 7.11 (1H, s), 7.60 (2H, d), [M+H]+=349, and enantiomer 1 (yield 6.6 mg, rt 31 min) and enantiomer 2 (yield 8.0 mg, rt 33 min) of the trans-diastereomer, 1H NMR (400 MHz, CDCl3): 1.27 (3H, t), 1.80-1.93 (1H, m), 1.98-2.10 (1H, m), 2.19-2.36 (3H, m), 2.44-2.54 (1H, m), 3.43 (2H, q), 4.48 (1H, m), 4.71 (1H, m), 6.82 (1H, dd), 6.96-7.01 (2H, m), 7.12 (1H, s), 7.56-7.61 (2H, m), [M+H]+=349.
Title compound was prepared from 2-(pyridin-3-yl)dihydro-2H-pyran-4(3H)-one (0.642 g, 3.6 mmol) prepared according to WO 2009/124882, hydroxylamine HCl (0.257 g, 3.6 mmol) and pyridine (4 ml) as described in Example 72(a). Crude oxime was used as such in the following step. [M+H]+=193.
Title compound was prepared from the compound of Example 87(a), LiAlH4 (0.113 g, 3.0 mmol) and THF (10 ml) as described in Example 86(b). Crude amine (0.161 g) was used as such in the following step. [M+2H]+=180.
The compound was prepared from the compound of Example 87(b) (0.157 g, 0.88 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.151 g, 0.8 mmol), DIPEA (0.45 ml, 0.334 g, 2.58 mmol) and DMSO (4 ml) as in Example 72(c). The crude product was purified by column chromatography. Yield 0.058 g. [M+H]+=348.
Title compound was prepared from the compound of Example 87(c) (0.056 g, 0.16 mmol), NaH (0.009 g, 0.23 mmol) and iodoethane (0.020 ml, 0.039 g, 0.25 mmol) and DMF (3 ml) as described in Example 72(d). Diastereomers were separated by preparative HPLC to obtain cis-diastereomer (5.7 mg), 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.75-1.90 (2H, m), 1.91-2.03 (1H, m), 2.07 (1H, m), 3.42 (2H, q), 3.76 (1H, td), 4.13 (1H, tt), 4.32 (1H, ddd), 4.55 (1H, dd), 6.87 (1H, dd), 7.01 (1H, d,) 7.30 (1H, dd), 7.61 (1H, d), 7.70 (1H, m), 8.56 (1H, d), 8.59-8.65 (1H, m), [M+H]+=376, and trans-diastereomer (2.8 mg). 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 1.76 (1H, m), 2.07 (1H, m), 2.25-2.35 (1H, m), 2.35-2.43 (1H, m), 3.43-3.54 (2H, m), 3.71 (1H, td), 3.88-3.99 (2H, m), 5.29 (1H, d), 6.76 (1H, dd), 6.93 (1H, d), 7.39 (1H, dd), 7.58 (1H, d), 7.75 (1H, m), 8.62 (1H, d), 8.72-8.76 (1H, m). [M+H]+=376.
The compound was prepared using the process of Srivastava, et al., J. Org. Chem., 2003, 68, 2109-2114 from cyclopentenone (0.834 ml, 0.821 g, 10 mmol), benzimidazole (3.54 g, 30 mmol), Bi(NO3)3.5H2O (0.97 g, 2 mmol) and DCM (2 ml). Yield 1.87 g. [M+H]+=201.
Title compound was prepared from the compound of Example 88(a) (1.87 g, 7.94 mmol), hydroxylamine hydrochloride (0.557 g, 8.02 mmol) and pyridine (6 ml) as described in Example 72(a). Crude oxime was used as such in the following step. [M+H]+=216.
Title compound was prepared from the compound of Example 88(b) (0.30 g, 1.39 mmol), LiAlH4 (0.154 g, 4.0 mmol) and THF (10 ml) as described in Example 86(b). Crude amine (0.257 g, a mixture of diastereomers) was used as such in the following step. [M+H]+=202.
Title compound was prepared from the compound of Example 88(c) (0.359 g, 1.78 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.281 g, 1.48 mmol), DIPEA (0.77 ml, 0.57 g, 4.42 mmol) and DMSO (3 ml) as in Example 72(c). The crude product was purified by column chromatography. Yield 0.141 g. [M+H]+=371.
Title compound was prepared from 4-((3-(1H-benzo[d]imidazol-1-yl)cyclopentyl)amino)-2-(trifluoromethyl)benzonitrile (0.14 g, 0.38 mmol), NaH (0.021 g, 0.53 mmol) and iodoethane (0.045 ml, 0.088 g, 0.57 mmol) and DMF (3 ml) as described in Example 72(d). Diastereomers were separated by preparative HPLC to obtain diastereomer 1 (17.4 mg), 1H NMR (400 MHz, CDCl3): 1.30 (3H, t), 1.91-2.04 (1H, m), 2.24-2.52 (4H, m), 2.52-2.63 (1H, m), 3.48 (2H, q), 4.56 (1H, m), 4.93-5.03 (1H, m), 6.84 (1H, dd), 7.00 (1H, d), 7.29-7.37 (2H, m), 7.40-7.46 (1H, m), 7.59 (1H, d), 7.79-7.88 (1H, m), 8.03 (1H, s), [M+H]+=399, and diastereomer 2 (15.3 mg). 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 2.00-2.12 (1H, m), 2.14-2.25 (1H, m), 2.25-2.40 (2H, m), 2.45-2.57 (1H, m), 2.72 (1H, m), 3.45 (2H, q), 4.36-4.47 (1H, m), 4.81-4.91 (1H, m), 6.88 (1H, dd), 7.03 (1H, d), 7.28-7.37 (2H, m), 7.40-7.47 (1H, m), 7.62 (1H, d), 7.81-7.87 (1H, m), 8.05 (1H, s), [M+H]+=399.
Title compound was prepared from 3-(1H-benzo[d]imidazol-1-yl)cyclohexanone (2.81 g, 11.1 mmol), hydroxylamine hydrochloride (0.782 g, 11.2 mmol) and pyridine (7 ml) as described in Example 72(a). Crude oxime was used as such in the following step. [M+H]+=230.
Title compound was prepared from the compound of Example 89(a) (2.88 g, 10.7 mmol), LiAlH4 (0.97 g, 25.6 mmol) and THF (40 ml) as described in Example 86(b). Crude amine was purified by filtrating it through a pad of silica. Yield 0.477 g (a mixture of diastereomers). [M+H]+=216.
Title compound was prepared from the compound of Example 89(b) (0.477 g, 2.22 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.349 g, 1.85 mmol), DIPEA (0.97 ml, 0.72 g, 5.55 mmol) and DMSO (4 ml) as described in Example 72(c). Product crystallized during work up and it was filtered off and washed with water. Yield 0.307 g. [M+H]+=385.
Title compound was prepared from the compound of Example 89(c) (0.375 g, 0.98 mmol), NaH (0.059 g, 1.46 mmol) and iodoethane (0.101 ml, 0.198 g, 1.26 mmol) and DMF (3 ml) as described in Example 72(d). Diastereomers were separated by reverse phase chromatography to obtain cis-diastereomer (0.102 g), 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.63-1.74 (2H, m), 1.84-1.97 (1H, m), 1.97-2.08 (2H, m), 2.19 (1H, m), 2.34 (1H, m), 2.42 (1H, m), 3.44 (2H, q), 3.90-4.00 (1H, m), 4.42 (1H, tt), 6.84 (1H, dd), 6.99 (1H, d), 7.27-7.36 (2H, m), 7.40-7.45 (1H, m), 7.61 (1H, d), 7.80-7.84 (1H, m), 8.01 (1H, s), [M+H]+=413, and trans-diastereomer (0.079 g), 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.77-1.88 (1H, m), 2.00-2.17 (5H, m), 2.51 (2H, m), 3.33-3.51 (2H, m), 3.70-3.80 (1H, m), 4.87-4.93 (1H, m), 6.29 (1H, dd), 6.70 (1H, d), 7.25-7.36 (4H, m), 7.84-7.91 (1H, m), 8.21 (1H, s), [M+H]+=413.
Title compound was prepared from the compound of Example 89(c) (0.116 g, 0.30 mmol), NaH (0.018 g, 1.46 mmol) and iodomethane (0.024 ml, 0.056 g, 0.39 mmol) and DMF (2 ml) as described in Example 72(d). Yield 0.095 g (˜1:1 mixture of diastereomers). cis-Diastereomer: 1H NMR (400 MHz, CDCl3): 1.66-1.74 (2H, m), 1.92-2.19 (4H, m), 2.39-2.50 (2H, m), 2.94 (3H, s), 3.98 (1H, m), 4.45 (1H, tt), 6.88 (1H, dd), 7.01 (1H, d), 7.22-7.37 (2H, m), 7.43-7.48 (1H, m), 7.56 (1H, d),7.77-7.81 (1H, m), 8.02 (1H, s). [M+H]+=399.
Title compound was prepared from 3-(1H-imidazol-1-yl)cyclohexanamine (0.40 g, 2.42 mmol), 2-chloro-4-fluorobenzonitrile (0.377 g, 2.42 mmol), DIPEA (1.27 ml, 0.94 g, 7.26 mmol) and DMSO (5 ml) as in Example 72(c). The crude product was purified by column chromatography. Yield 0.424 g. [M+H]+=301.
Title compound was prepared from the compound of Example 91(a) (0.420 g, 1.40 mmol), NaH (0.073 g, 1.82 mmol) and iodoethane (0.156 ml, 0.305 g, 1.96 mmol) and DMF (6 ml) as described in Example 72(d). Diastereomers were separated by reverse phase column chromatography to obtain cis-diastereomer (0.045 g), 1H NMR (400 MHz, CDCl3): 1.20 (3H, t), 1.52-1.73 (3H, m), 1.79-1.97 (2H, m), 2.02-2.13 (1H, m), 2.21 (2H, m), 3.37 (2H, q), 3.80 (1H, tt), 4.13 (1H, tt), 6.59 (1H, dd), 6.71 (1H, d), 6.98 (1H, s), 7.07 (1H, s), 7.42 (1H, d), 7.57 (1H, s), [M+H]+=329, and trans-diastereomer (0.033 g). 1H NMR (400 MHz, CDCl3): 1.21 (3H, t), 1.62-1.73 (1H, m), 1.78-1.87 (1H, m), 1.87-1.98 (3H, m), 1.98-2.08 (1H, m), 2.32 (1H, m), 2.41 (1H, m), 3.35 (2H, m), 3.66-3.75 (1H, m), 4.52-4.58 (1H, m), 6.41 (1H, dd), 6.57 (1H, d), 7.08 (1H, s), 7.20 (1H, s), 7.37 (1H, d), 7.68 (1H, s), [M+H]+=329.
The compound was prepared using the process of Srivastava, et al., J. Org. Chem., 2003, 68, 2109-2114 from 4,4-dimethylcyclohex-2-enone (0.789 ml, 0.745 g, 6 mmol), imidazole (1.23 g, 18 mmol), Bi(NO3)3.5H2O (0.29 g, 0.6 mmol) and DCM (0.8 ml). Crude yield 1.058 g. [M+H]+=193.
Title compound was prepared from crude compound of Example 92(a), hydroxylamine HCl (0.421 g, 6.05 mmol) and pyridine (6 ml) as described in Example 72(a). Crude oxime was used as such in the following step. [M+H]+=208.
Title compound was prepared from the crude compound of Example 92(b), LiAlH4 (0.47 g, 12.4 mmol) and THF (20 ml) as described in Example 86(b). Crude amine was used as such in the following step. [M+H]+=194.
Title compound was prepared from crude compound of Example 92(c), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.783 g, 4.14 mmol), DIPEA (2.2 ml, 1.63 g, 12.6 mmol) and DMSO (10 ml) as described in Example 72(c). Crude adduct was purified by column chromatography. Yield 0.235 g. [M+H]+=363.
Title compound was prepared from the compound of Example 92(d), (0.225 g, 0.62 mmol), NaH (0.036 g, 0.90 mmol) and iodoethane (0.066 ml, 0.129 g, 0.83 mmol) and DMF (4 ml) as described in Example 72(d). All four enantiomers were separated by chiral HPLC (Column: Daicel Chiralpak IA 20 mm×250 mm 5 Gm, eluent A: n-hexane+0.1% DEA, eluent B: EtOH+0.1% DEA, isocratic B 10%, 20 ml/min) to obtain enantiomer 1 (yield 0.017 g, rt 29 min) and enantiomer 2 (yield 0.019 g, rt 35 min) of the cis-diastereomer, 1H NMR (400 MHz, CDCl3): 0.94 (3H, s), 1.00 (3H, s), 1.26 (3H, t), 1.48-1.59 (1H, m), 1.72-1.90 (3H, m), 1.96-2.04 (1H, m), 2.24 (1H, q), 3.47 (2H, q), 3.84 (1H, tt), 3.93 (1H, dd), 6.81 (1H, dd), 6.90 (1H, s), 6.95 (1H, d), 7.05 (1H, s,) 7.48 (1H, s), 7.57 (1H, d), [M+H]+=391, and enantiomer 1 (yield 0.007 g, rt 43 min) and enantiomer 2 (yield 0.008 g, rt 52 min) of the trans-diastereomer, 1H NMR (400 MHz, CDCl3): 0.77 (3H, s), 1.21-1.26 (6H, m), 1.61-1.70 (1H, m), 1.84-2.02 (4H, m), 2.24 (1H, ddd), 3.33-3.52 (2H, m), 4.10-4.23 (2H, m), 6.66 (1H, dd), 6.87 (1H, d), 7.17 (2H, s), 7.53 (1H, d), 7.57 (1H, s), [M+H]+=391.
A reaction flask was charged with 4-((3-aminocyclohexyl)amino)-2-(trifluoromethyl)benzonitrile (2.9 g, 10.2 mmol), benzaldehyde (1.04 ml, 1.09 g, 10.2 mmol) and toluene (50 ml). A Dean-Stark trap was attached and the mixture was heated to boiling. The reaction was complete in 3 h. Solvent was evaporated and the residue was dissolved in DMF (10 ml) at 0° C. NaH (0.6 g, 15 mmol) was added followed by iodoethane (0.98 ml, 1.92 g, 12.3 mmol). The mixture was allowed to react at RT. The reaction was quenched with 1 M NaHSO4 and the aqueous layer was extracted with EtOAc. Combined organic layers were washed with 2 M NaOH, dried and concentrated. The intermediate imine was hydrolyzed by treating the residue with aqueous 6 M HCl in Et2O and triturating the HCl salt with Et2O. Title compound was released from its HCl salt with 2 M NaOH solution and EtOAc extraction. Crude yield 3.3 g. 1H NMR (400 MHz, MeOH-d4): 1.22 (4H, t), 1.43-1.58 (3H, m), 1.76-1.87 (1H, m), 1.88-1.99 (3H, m), 1.99-2.07 (1H, m), 2.93-3.00 (1H, m), 3.48 (2H, q), 3.88 (1H, m), 7.01-7.07 (2H, m), 7.67 (1H, d).
The compound was prepared from the compound of Example 93(a) (0.311 g, 1 mmol), butyraldehyde (0.135 ml, 0.108 g, 1.5 mmol), tosylmethyl isocyanide (0.293 g, 1.5 mmol), K2CO3 (0.207, 1.5 mmol) and DMF (2 ml) as described in Example 73(b). The title compound was purified by preparative HPLC. Yield 0.040 g (cis-diastereomer). 1H NMR (400 MHz, CDCl3): 1.03 (3H, t), 1.22 (3H, t), 1.54-1.74 (5H, m), 1.84 (1H, m), 1.98 (1H, m), 2.06-2.24 (3H, m), 2.51 (2H, t), 3.43 (2H, q), 3.78-3.88 (1H, m), 3.95 (1H, tt), 6.78 (1H, s), 6.81 (1H, dd), 6.96 (1H, d), 7.53 (1H, s), 7.59 (1H, d). [M+H]+=405.
Title compound was prepared from 4-((3-aminocyclohexyl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile (0.409 g, 1.31 mmol), 3-pyridin-3-ylpropanal (0.266 g, 1.97 mmol), tosylmethyl isocyanide (0.385 g, 1.97 mmol), K2CO3 (0.272, 1.97 mmol) and DMF (4 ml) as described in Example 73(b). Title compound was purified by preparative HPLC. Yield 0.065 g (cis-diastereomer). 1H NMR (400 MHz, CDCl3): 1.21 (3H, t), 1.43-1.73 (3H, m), 1.82 (1H, m), 1.94 (1H, m), 1.98-2.14 (3H, m), 2.87 (2H, m), 3.00 (2H, m), 3.41 (2H, q), 3.70-3.84 (2H, m), 6.80 (1H, dd), 6.85 (1H, s), 6.89-6.96 (1H, m), 7.21 (1H, dd), 7.48 (1H, d), 7.54 (1H, s), 7.56 (1H, d). [M+H]+=468.
Title compound was prepared from 4-((3-aminocyclohexyl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile (0.409 g, 2.06 mmol), 3-(benzyloxy)propanal (0.338 g, 2.06 mmol), tosylmethyl isocyanide (0.602 g, 3.08 mmol), K2CO3 (0.426, 3.08 mmol) and DMF (4 ml) as in Example 73(b). Title compound was purified by preparative HPLC. Yield: 0.013 g (cis-diastereomer). 1H NMR (400 MHz, CDCl3): 1.19 (3H, t), 1.37-1.47 (1H, m), 1.47-1.55 (1H, m), 1.63-1.69 (1H, m), 1.78 (1H, m), 1.89 (1H, m), 1.95-2.10 (2H, m), 2.16 (1H, m), 2.87 (2H, t), 3.38 (2H, q), 3.64-3.75 (3H, m), 4.09 (1H, tt), 4.43-4.52 (2H, m), 6.74 (1H, dd), 6.83 (1H, s), 6.91 (1H, d), 7.18-7.35 (5H, m), 7.53 (1H, s), 7.56 (1H, d). [M+H]+=497.
The title compound was prepared from 4,4-dimethyl-1,3-cyclohexanedione (5 g, 35.7 mmol), oxalyl chloride (3.52 ml, 5.21 g, 41 mmol) and DCM (80 m) as described in Example 74(a). The compound was used as such in the following step. Yield 5.31 g. [M+H]+=159.
The title compound was prepared from the compound of Example 96(a) (5.3 g, 33.4 mmol), imidazole (4.55 g, 66.8 mmol), triethylamine (23 ml, 16.7 g, 165 mmol), KHCO3 (0.669 g, 6.7 mmol) and toluene (100 m) as described in Example 74(b) except that the mixture was refluxed instead of using a microwave reactor. Crude yield 6.67 g. [M+H]+=191.
The title compound was prepared from crude compound of Example 96(b) (6.17 g), CeCl3-7H2O (13.29 g, 35.7 mmol), NaBH4 (1.47 g, 38.9 mmol) and MeOH (60 ml) as described in Example 74(c). Crude yield 4.87 g. [M+H]+=193.
The title compound was prepared from crude compound of Example 96(c) (3.5 g, 18.2 mmol), DPPA (5.9 ml, 7.53 g, 27.4 mmol), DBU (4.6 ml, 4.69 g, 30.8 mmol) and toluene (60 ml) as described in Example 74(d). Crude yield 1.98 g. 1H NMR (400 MHz, MeOH-d4): 1.04 (3H, s), 1.08 (3H, s), 1.64 (1H, m), 1.77 (1H, m), 2.52-2.68 (2H, m), 3.83-3.88 (1H, m), 6.00-6.05 (1H, m), 7.05 (1H, s), 7.46 (1H, m), 7.98 (1H, s). [M+H]+=218.
The title compound was prepared from crude compound of Example 96(d) (1.75 g, 8.05 mmol), PPh3 (4.23 g, 16.1 mmol) and MeOH (50 ml) as described in Example 74(e). When all of the azide had reacted, the intermediate iminophosphorane was hydrolyzed with 1 M NaOH at RT. MeOH was evaporated and the aqueous layer was acidified with 1 M HCl and extracted with EtOAc. Aqueous layer was basified with 2 M NaOH and extracted with DCM. Combined DCM layers were washed with brine, dried and concentrated. Crude yield 1.078 g. [M+H]+=192.
The title compound was prepared from crude compound of Example 96(e) (1.22 g, 6.4 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (1.23 g, 6.5 mmol), DIPEA (2.8 ml, 2.09 g, 16.1 mmol) and DMSO (15 m) as described in Example 74(f). Title compound was purified by column chromatography. Yield 1.078 g. [M+H]+=361.
Title compound was prepared from the compound of Example 96(f) (1.15 g, 3.2 mmol), NaH (0.191 g, 4.8 mmol) and iodoethane (0.306 ml, 0.597 g, 0.83 mmol) and DMF (15 ml) as described in Example 72(d). Yield 0.824 g. Enantiomers were separated by chiral HPLC (Column: Daicel Chiralpak IA 20 mm×250 mm 5 μm, solvent A: n-hexane+0.1% DEA, solvent B: EtOH+0.1% DEA, isocratic B 10%, 20 ml/min) to obtain of 0.068 g of enantiomer 1 (rt 22 min) and 0.070 g of enantiomer 2 (rt 27 min). 1H NMR (400 MHz, CDCl3): 0.98 (3H, s), 1.11 (3H, s), 1.20 (3H, t), 1.67-1.76 (1H, m), 1.76-1.86 (1H, m), 2.51-2.71 (2H, m), 3.43-3.55 (2H, m), 4.46-4.52 (1H, m), 5.69-5.73 (1H, m), 6.93 (1H, dd), 7.09 (1H, d), 7.12-7.14 (1H, m), 7.15-7.18 (1H, m), 7.60 (1H, d), 7.76 (1H, s). [M+H]+=389.
Title compound was prepared from 3,3,7,7-tetramethyl-1,5-dioxaspiro[5.5]-undecan-8-one (4.89 g, 21.6 mmol) prepared using a method of Törmakangas, O. et al, Tetrahedron 2002, 58, 2175-81, hydroxylamine HCl (1.5 g, 21.6 mmol) and pyridine (50 ml) as described in Example 72(a). Crude yield 3.489 g. [M+H]+=242.
Title compound was prepared from the crude compound of Example 97(a) (3.498 g), LiAlH4 (0.825 g, 21.7 mmol) and THF (50 ml) as described in Example 86(b). Crude amine (3.6 g) was used as such in the following step. 1H NMR (400 MHz, CDCl3): 0.70 (3H, s), 0.90 (3H, s), 1.10 (3H, s), 1.18 (3H, s), 1.21-1.47 (6H, m), 1.53 (1H, m), 1.60-1.68 (1H, m), 2.27-2.36 (1H, m), 2.76-2.85 (1H, m), 3.23-3.33 (2H, m), 3.58 (1H, d), 3.67 (1H, d). [M+H]+=228.
Title compound was prepared from crude compound of Example 97(b) (3.3 g, 14.5 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (2.75 g, 14.5 mmol), DIPEA (6.3 ml, 4.67 g, 36.2 mmol) and DMSO (20 m) as in Example 72(c). The crude product was purified by column chromatography. Yield 3.496 g. [M+H]+=397.
Title compound was prepared from the compound of Example 97(c) (3.496 g, 8.8 mmol), NaH (0.529 g, 13.2 mmol) and iodoethane (0.92 ml, 1.79 g, 11.5 mmol) as described in Example 72(d). Crude product was purified by column chromatography. Yield 3.38 g. [M+H]+=425.
The compound of Example 97(d) (3.38 g, 8.0 mmol), THF (20 ml) and 4 M HCl (10 ml) were mixed together at RT. When all of the ketal had hydrolyzed to ketone, solution was diluted with water and EtOAc and phases were separated. The aqueous layer was extracted with EtOAc. Combined organic layers were washed with water, brine, dried and concentrated. Product was purified by triturating crude product with EtOAc. Yield 0.833 g. 1H NMR (400 MHz, CDCl3): 1.07 (3H, s), 1.21 (3H, t), 1.24 (3H, s), 1.62-1.77 (1H, m), 1.93-2.03 (1H, m), 2.07-2.18 (1H, m), 2.22-2.35 (1H, m), 2.42 (1H, m), 2.54-2.65 (1H, m), 3.55 (2H, q), 3.95 (1H, dd), 6.89 (1H, dd), 7.03 (1H, d), 7.58 (1H, d). [M+H]+=339.
Title compound was prepared from the compound of Example 97(e) (0.200 g, 0.59 mmol), N-phenyltrifluoromethanesulfonimide (0.253 g, 0.71 mmol) and THF (5 ml) as in Example 78(a). Crude product was purified by column chromatography. Yield 0.158 g. 1H NMR (400 MHz, CDCl3): 1.12 (3H, s), 1.16-1.23 (6H, m), 1.86-1.94 (1H, m), 2.04-2.16 (1H, m), 2.37 (2H, m), 3.48-3.56 (2H, m), 4.06 (1H, dd), 5.79 (1H, t), 6.96 (1H, dd), 7.10 (1H, d), 7.60 (1H, d). [M+H]+=471.
A solution of the compound of Example 97(e) (0.158 g, 0.34 mmol), THF (8 ml), pyridineboronic acid (0.103 g, 0.84 mmol), bis(triphenylphosphine)palladium(II) chloride (0.024 g, 0.03 mmol) and 2 M Na2CO3 (0.67 ml, 1.34 mmol) was degassed with N2 and heated to 80° C. for 5 h. The mixture was partitioned between water and DCM. Aqueous layer was extracted with DCM. Combined organic layers were dried and concentrated. Crude product was purified by column chromatography. Yield 0.034 g. 1H NMR (400 MHz, CDCl3): 0.87 (3H, s), 1.15 (3H, s), 1.22 (3H, t), 1.88-1.98 (1H, m), 2.18-2.31 (1H, m), 2.37-2.45 (2H, m), 3.47-3.66 (2H, m), 4.16 (1H, dd), 5.52 (1H, t), 6.98 (1H, dd), 7.12 (1H, d), 7.23 (1H, dd), 7.48 (1H, dt), 7.57 (1H, d), 8.41 (1H, d), 8.52 (1H, dd). [M+H]+=400.
A flask was charged with phosphorous oxychloride (0.4 ml, 0.66 g, 4.3 mmol) and cooled to 0° C. DMF (0.4 ml) was added and the solution was stirred for 15 min at 0° C. before 4-((2,2-dimethyl-3-oxocyclohexyl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile (0.100 g, 0.3 mmol) in CHCl3 (2 ml) was added. Cooling bath was removed and the mixture was heated to 60° C. for 3.5 h. The reaction was quenched with water and the aqueous layer was extracted with DCM. Combined organic layers were washed with water, brine, dried and concentrated. Crude product was purified by column chromatography. Yield 0.047 g (contains impurities). [M+H]+=385.
A mixture of the compound of Example 98(a) (0.069 g, impure), DMF (2 ml), imidazole (0.0366 g, 0.54 mmol) and K2CO3 (0.099 g, 0.72 mmol) was heated to 80° C. for 6.5 h. Water was added while the flask was cooled on an ice bath. Aqueous layer was extracted with EtOAc. Combined organic layers were washed with water, brine, dried and concentrated. Crude product was purified by column chromatography. Yield 0.036 g. 1H NMR (400 MHz, CDCl3): 1.03 (3H, s), 1.18-1.31 (6H, m), 2.05-2.13 (1H, m), 2.19 (1H, m), 2.32-2.47 (1H, m), 2.72-2.85 (1H, m), 3.49-3.62 (2H, m), 4.18 (1H, dd), 6.96-7.04 (1H, m), 7.08 (1H, s), 7.13 (1H, m), 7.21 (1H, s), 7.48 (1H, s), 7.61 (1H, d), 8.83 (1H, s). [M+H]+=417.
A microwave reactor vial was charged with the compound of Example 98(b) (0.036 g, 0.09 mmol), 10% Pd/C (0.037 g) and benzonitrile (1 ml). The flask was closed and heated to 200° C. for 3 h. The catalyst was filtered off and the filtrate was concentrated. Crude product was purified by column chromatography. Yield 0.0076 g. 1H NMR (400 MHz, CDCl3): 0.89 (3H, s), 1.19 (3H, s), 1.22 (3H, t), 1.92-2.00 (1H, m), 2.16-2.28 (1H, m), 2.42 (2H, m), 3.55 (2H, q), 4.16 (1H, dd), 5.81 (1H, t), 6.92 (1H, br. s.), 6.98 (1H, dd), 7.08 (1H, br. s.), 7.12 (1H, d), 7.43 (1H, br. s.), 7.59 (1H, d). [M+H]+=389.
To a solution of 2-methylcyclohexane-1,3-dione (30.0 g, 0.238 mol) in acetone (250 ml) were added MeI (37.1 ml, 84.6 g, 0.595 mol) and K2CO3 (65.7 g, 0.476 mol). The mixture was refluxed for 8 h, then concentrated, quenched with water and extracted with DCM. The organic layer was washed with water, dried, filtered and concentrated. The crude was purified by column chromatography. Yield 23.0 g. 1H-NMR (400 MHz; CDCl3): 1.30 (6H, s), 1.87-1.98 (2H, m), 2.68 (4H, t).
To a mixture of the compound of Example 99(a) (23.0 g, 0.164 mol) and pyridine (26.5 ml, 0.329 mol) in MeOH (200 ml) was added NH2OH.HCl (8.01 g, 0.114 mol) at 0° C. followed by stirring at RT for 3 h. The solvent was distilled off and the crude mass was purified by column chromatography. Yield 13.8 g. 1H-NMR (400 MHz; DMSO-d6): 1.21 (6H, s), 1.72-1.80 (2H, m), 2.45 (2H, t), 2.67 (2H, t).
To a suspension of LiAlH4 (14.7 g, 0.387 mol) in THF (250 ml) was added a solution of the compound of Example 99(b) (6.0 g, 0.039 mol) in THF (100 ml) at 0° C. dropwise. The mixture was heated to reflux for 12 h, cooled to 0° C. and quenched by the addition of saturated aqueous Na2SO4 solution carefully. Once the white solid started forming, K2CO3 was added to the suspension with vigorous stirring. The white suspension was filtered and the filtrate was concentrated under reduced pressure. Yield 5.5 g (crude). [M+H]+=144
To a solution of the compound of Example 99(c) (5.0 g, 0.035 mol) in MeOH (100 ml) were added glyoxal (40% aqueous solution, 15.1 ml, 0.104 mol), NH4OAc (8.02 g, 0.104 mol) and HCHO (35% aqueous solution, 8.9 ml, 0.104 mol). The mixture was stirred at 60° C. for 8 h. The solvent was evaporated and the residue was basified with 2 M aqueous KOH solution (pH 10) and extracted with DCM. The organic layer was washed with brine, dried, filtered and concentrated. The crude was purified by column chromatography. Yield 4.1 g. [M+H]+=195.
To a solution of the compound of Example 99(d) (1.5 g, 0.007 mol) in DCM (50 ml) was added Dess-Martin periodinane (9.8 g, 0.023 mol). The mixture was stirred at RT for 12 h. The reaction was quenched by the addition of aqueous Na2S2O3.5H2O solution followed by stirring for 30 min and extracting with DCM.
The organic layer was washed with aqueous NaHCO3 solution and brine, dried, filtered and concentrated. The crude was purified by column chromatography. Yield 1.5 g. [M+1]+=193.
To a mixture of the compound of Example 99(e) (1.5 g, 0.007 mol) and pyridine (1.6 ml, 0.02 mol) in MeOH (40 ml) was added NH2OH.HCl (0.653 g, 0.009 mol) at 0° C. The mixture was stirred at RT for 2 h. The solvent was distilled off and the crude mass was diluted with MeCN and filtered. The filtrate was concentrated under reduced pressure. Yield 1.5 g (crude). [M+H]+=208.
The compound was prepared from the compound of Example 99(f) (2.0 g, 0.009 mmol), LiAlH4 (1.83 g, 0.048 mol) and THF (150 ml) as described in Example 99(c). Yield 1.6 g. [M+H]+=194.
To a solution the compound of Example 99(g) (1.6 g, 0.008 mol) in THF (20 ml) were added saturated aqueous solution of NaHCO3 (10 ml) and Boc2O (2.5 ml, 0.011 mol) followed by stirring at RT overnight. The reaction mixture was quenched with water and extracted with EtOAc, washed with water, dried, filtered and concentrated. The crude residue was triturated with MeCN and then filtered. The filter cake was washed with MeCN and dried under vacuum to give trans-isomer of the title compound. Yield 400 mg (trans-isomer). [M+H]+=294. The filtrate was concentrated under reduced pressure and purified by column chromatography to give the cis-isomer of the title compound. Yield 510 mg (cis-isomer). [M+H]+=294.
The title compound was prepared from the compound of Example 99(h) (cis-isomer, 450 mg, 1.5 mmol) in dioxane (1 ml) and 4 N HCl in dioxane (5 ml). The mixture was stirred at RT for 5 h and concentrated under reduced pressure. The solid formed was washed with DCM and dried under vacuum. Yield 0.340 g (crude); 1H-NMR (400 MHz; DMSO-d6): δ 0.86 (3H, s), 0.95 (3H, s), 1.40-1.61 (2H, m), 1.72-1.80 (1H, m), 1.81-1.94 (2H, m), 2.11-2.22 (1H, m), 2.98-3.06 (1H, m), 4.34 (1H, dd), 7.74 (1H, s), 7.79 (1H, s), 8.36 (1H, s), 9.26 (1H, s); [M+H]+=194.
Title compound was prepared the compound of Example 99(i) (0.17 g, 0.64 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.123 g, 0.65 mmol), DIPEA (0.40 ml, 0.297 g, 2.3 mmol) and DMSO (2 ml) as in Example 72(c). The crude product was purified by column chromatography. Yield: 0.09 g. 1H NMR (400 MHz, CDCl3): 0.92 (3H, s), 0.96 (3H, s), 1.45-1.63 (2H, m), 1.85-2.10 (4H, m), 3.30-3.38 (1 H, m), 3.89 (1H, dd), 4.38 (1H, d), 6.73 (1H, dd), 6:89 (1H, d), 6.92 (1H, s), 7.06 (1H, s), 7.50 (1H, s), 7.55 (1H, d). [M+H]+=363.
Title compound was prepared from the compound of Example 99(j) (0.90 g, 0.25 mmol), NaH (0.020 g, 0.05 mmol) and iodoethane (0.026 ml, 0.05 g, 0.32 mmol) and DMF (1 ml) as in Example 72(d). Crude product was purified by column chromatography. Yield 0.02 g. 1H NMR (400 MHz, CDCl3): 0.82 (3H, s), 1.02 (3H, s), 1.17 (3H, t), 1.58-1.70 (1H, m), 1.80 (1H, m), 1.88-1.96 (1H, m), 2.01-2.14 (3H, m), 3.51 (2H, q), 3.84 (1H, dd), 3.93 (1H, dd), 6.91 (1H, s), 6.96 (1H, dd), 7.04 (1H, s), 7.09 (1H, d), 7.49 (1H, s), 7.59 (1H, d). [M+H]+=391.
A flask was charged with 4-iodo-1-tritylimidazole (0.567 g, 1.3 mmol) and DCM (4 ml). Isopropylmagnesium bromide (1.0 M, 1.8 ml, 1.5 mmol) was added. The mixture was allowed to react at RT for 3 h. 4-((2,2-Dimethyl-3-oxocyclohexyl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile (0.321 g, 0.95 mmol) in DCM (4 ml) was added. The mixture was stirred overnight and then quenched with saturated NH4Cl. The solution diluted with water and DCM. Aqueous layer was extracted with DCM. Combined DCM layers were washed with brine, dried and concentrated. Crude product was purified by column chromatography. Yield 0.317 g (impure). [M+H]+=649.
Flask was charged with the compound of Example 100(a) (0.317 g), DCM (1 ml) and concentrated H2SO4 (1 ml) at 0° C. The mixture was stirred for 3 h and then diluted with water and quenched with 48% NaOH-solution. Aqueous layer was extracted with EtOAc. Combined organic layers were dried and concentrated. Crude product was purified by preparative HPLC. Yield 0.0317 g. 1H NMR (400 MHz, CDCl3): 1.03 (3H, s), 1.21 (3H, t), 1.31 (3H, s), 1.84-1.92 (1H, m), 2.15-2.26 (1H, m), 2.36-2.42 (2H, m), 3.49-3.62 (2H, m), 4.10 (1H, dd), 5.89 (1H, t), 6.91-6.96 (2H, m), 7.11 (1H, d), 7.54 (1H, d), 7.57-7.59 (1H, m). [M+H]+=389.
The compound was prepared from 4-((3-aminocyclohexyl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile (0.600 g, 1.73 mmol), tert-butyl N-(2-oxoethyl)carbamate (0.275 g, 1.73 mmol), tosylmethyl isocyanide (0.505 g, 2.59 mmol), K2CO3 (0.358, 2.59 mmol) and DMF (6 ml) as described in Example 73(b). Crude product was purified by column chromatography to yield the title compound (0.357 g, impure). [M+H]+=492.
Flask was charged with impure compound of Example 101(a) (0.357 g), TFA (0.35 ml, 0.52 g, 4.57 mmol) and DCM (4 ml). The mixture was allowed to react overnight at RT. The mixture was partitioned between saturated NaHCO3 and DCM. Aqueous layer was extracted with DCM. Combined organic layers were dried and concentrated. Crude product was purified by column chromatography to yield the title compound. Yield 0.067 g, impure. [M+H]+=392.
The compound of Example 101(b) (0.067 g, impure), DCM (2 ml), DIPEA (0.058 ml, 0.043 g, 0.33 mmol) and acetyl chloride (0.014 ml, 0.016 g, 0.2 mmol) were mixed together at 0° C. Reaction was complete in half an hour. The mixture was partitioned between saturated NaHCO3 and DCM. Aqueous layer was extracted with DCM. Combined organic layers were dried and concentrated. Product was purified by preparative HPLC. Yield 0.007 g (cis-diastereomer). 1H NMR (400 MHz, CDCl3); 1.21 (3H, t), 1.52-1.72 (3H, m), 1.77 (1H, m), 1.88-1.93 (1H, m), 1.94 (3H, s), 2.03-2.14 (3H, m), 3.33-3.48 (2H, m), 3.88-3.98 (1H, m), 4.30-4.40 (1H, m), 4.40-4.56 (2H, m), 5.78-5.86 (1H, m), 6.92 (1H, s), 6.96 (1H, dd), 7.02 (1H, d), 7.57 (1H, s), 7.60 (1H, d). [M+H]+=434.
To an ice cold stirred suspension of LiAlH4 (4.0 g, 103 mmol) in THF (100 ml) was added dropwise tert-butyl (3-(methoxy(methyl)carbamoyl)cyclopentyl)carbamate (28.0 g, 103 mmol, WO 2007/099385) in THF (200 ml). The mixture was stirred for 1 h at 0° C. and then quenched with saturated aqueous Na2SO4 solution. The precipitated solids were filtered on celite and washed with EtOAc. The filtrate was dried and concentrated to afford crude aldehyde product (20 g). A solution of aldehyde product (7.0 g, 32.8 mmol) and 2-methoxyethanamine (2.5 g, 32.8 mmol) in THF (100 ml) was stirred for 6 h. TosMIC (5.12 g, 26.25 mmol) and piperizine (2.54 g, 29.5 mmol) were added and the mixture was heated at 50° C. for 16 h. The mixture was cooled to RT, diluted with ice water and extracted with EtOAc. The organic layer was washed with brine, dried, filtered and concentrated to afford the title compound (1.7 g, crude). Diastereomers were separated by normal phase chiral preparative HPLC (Chiralpak ADH (4.6×250 mm) 5 μm, Solvent A: n-Hexane+0.1% DEA: Solvent B: 2-propanol, isocaratic 20% B, 1 ml/min) to obtain 700 mg of cis-isomer (as peak-1) and 550 mg of trans-isomer (as peak-2); [M+H]+=194.
To a stirred solution of the compound of Example 102(a) (cis-isomer, 700 mg, 2.26 mmol) was added 5 N HCl in methanol (7 ml) at 0° C. followed by stirring for 2 h. Solvent was evaporated to dryness and the crude compound was triturated with anhydrous Et2O. Yield 0.50 g. [M+H]+=210.
The compound was prepared from the compound of Example 102(b) (cis-diastereomer, 0.50 g, 0.64 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.342 g, 1.81 mmol), DIPEA (1.0 ml, 0.742 g, 5.7 mmol) and DMSO (3 ml) as in Example 72(c). The crude product was purified by column chromatography. Yield 0.248 g. 1H NMR (400 MHz, CDCl3): 1.63 (1H, m), 1.71-1.92 (2H, m), 2.10-2.23 (2H, m), 2.59-2.68 (1H, m), 3.16 (1H, m), 3.33 (3H, s), 3.62 (2H, t), 3.93-4.01 (1H, m), 4.03 (2H, t), 5.09 (1H, d), 6.68 (1H, dd), 6.80 (1H, s), 6.86 (1H, d), 7.51 (1H, s), 7.54 (1H, d). [M+H]+=379.
The compound was prepared from the compound of Example 102(c) (0.248 g, 0.66 mmol), NaH (0.042 g, 1.05 mmol) and iodoethane (0.068 ml, 0.133 g, 0.85 mmol) and DMF (2 ml) as in Example 72(d). Crude product was purified by column chromatography. Yield 0.202 g (cis-isomer). 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.71-1.93 (3H, m), 2.09-2.25 (2H, m), 2.41 (1H, m), 3.09-3.19 (1H, m), 3.34 (3H, s), 3.42 (2H, q), 3.63 (2H, t), 4.04 (2H, t), 4.24-4.36 (1H, m), 6.83 (1H, dd), 6.86 (1H, s), 7.00 (1H, d), 7.52 (1H, s), 7.57 (1H, d). [M+H]+=407.
4-((3-(1H-imidazol-4-yl)cyclopent-3-en-1-yl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile (0.52 g, 1.5 mmol) was dissolved in DMF (6 ml). K2CO3 (0.249 g, 1.80 mmol) was added followed by chloromethyl pivalate (0.26 ml, 0.27 g, 1.80 mmol). The mixture was allowed react at RT for 2.5 h. Solvent was evaporated and the residue was partitioned between water and EtOAc. Aqueous layer was extracted with EtOAc. Combined organic layers were washed with water, brine, dried and concentrated. Crude product was purified by column chromatography. Yield 0.51 g. 1H NMR (400 MHz, CDCl3): 1.17 (9H, s), 1.22 (3H, t), 2.60-2.76 (2H, m), 2.88-3.06 (2H, m), 3.46 (2H, q), 4.65-4.74 (1H, m), 5.82 (2H, s), 6.28 (1H, m), 6.79 (1H, dd), 6.97 (1H, s), 6.99 (1H, d), 7.56 (1H, d), 7.66 (1H, d).
A vial was charged with the compound of Example 103(a) (0.10 g, 0.22 mmol), MeCN (1 ml) and iodopropane (0.042 ml, 0.074 g, 0.43 mmol). The vial was closed and heated to 80° C. for 8 h and cooled to 60° C. overnight. Solvent was evaporated and the residue was treated with ammonia (7 M in MeOH, 0.31 ml, 2.2 mmol) for 2 h, and concentrated. Crude product was purified by preparative HPLC. Yield 0.012 g. 1H NMR (400 MHz, CDCl3): 0.99 (3H, t), 1.24 (3H, t), 1.84 (2H, sxt), 2.70 (1H, m), 2.79-2.89 (1H, m), 3.00 (1H, m), 3.10 (1H, m), 3.46 (2H, q), 4.02 (2H, t), 4.62-4.72 (1H, m), 5.82-5.87 (1H, m), 6.81 (1H, dd), 6.98 (1H, d), 7.01 (1H, s), 7.48 (1H, s), 7.58 (1H, d). [M+H]+=389.
The compound was prepared from the compound of Example 103(a) (0.2 g, 0.43 mmol), ethyl 3-bromopropionate (0.111 ml, 0.157 g, 0.87 mmol) and MeCN (1 ml) as described in Example 103(b). Yield 0.05 g (impure). [M+H]+=447.
A mixture of the compound of Example 104(a) (0.05 g), EtOH (2 ml) and NaBH4 (0.026 g, 0.69 mmol) were refluxed for 1 h. Solvent was evaporated and the residue was partitioned between water and EtOAc. Aqueous layer was extracted with EtOAc. Combined organic layers were dried and concentrated. Crude product was purified by column chromatography. Yield 0.008 g. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.99-2.08 (2H, m), 2.70 (1H, m), 2.85 (1H, m), 2.99 (1H, m), 3.05-3.14 (1H, m), 3.46 (2H, q), 3.67 (2H, t), 4.26 (2H, t), 4.61-4.73 (1H, m), 5.94-6.01 (1H, m), 6.77-6.83 (1H, m), 6.99 (2H, d), 7.53 (1H, br. s.), 7.57 (1H, d). [M+H]+=405.
The compound was prepared from spiro[2.5]octane-4,6-dione (2.2 g, 15.9 mmol), oxalyl chloride (1.5 ml, 2.2 g, 17.5 mmol) and DCM (30 ml) as described in Example 74(a). Title compound was used as such in the following step. Yield 2.25 g. [M+H]+=157.
The compound was prepared from the compound of Example 105(a) (2.25 g, 14.4 mmol), imidazole (1.96 g, 28.7 mmol), triethylamine (6 ml, 4.36 g, 43 mmol) and toluene (40 ml) as described in Example 74(b) except that the mixture was refluxed instead of using a microwave reactor. Crude yield 2.11 g. [M+H]+=189.
The compound was prepared from crude compound of Example 105(b) (2.15 g, 11.5 mmol), CeCl3.7H2O (4.69 g, 12.6 mmol), NaBH4 (0.52 g, 13.7 mmol) and MeOH (20 ml) as described in Example 74(c). Crude yield 1.64 g. [M+H]+=191.
The compound was prepared from crude compound of Example 105(c) (1.64 g, 8.6 mmol), dppa (2.4 ml, 3.06 g, 11.1 mmol), DBU (1.9 ml, 1.94 g, 12.7 mmol) and toluene (25 ml) as described in Example 74(d). Crude product was purified by column chromatography. Yield 0.798 g. 1H NMR (400 MHz, CDCl3): 0.44-0.52 (2H, m), 0.60-0.68 (1H, m), 0.80-0.87 (1H, m), 1.13-1.23 (1H, m), 2.26-2.36 (1H, m), 2.53-2.69 (2H, m), 3.35 (1H, d), 5.93 (1H, d), 7.12 (1H, s), 7.18 (1H, s), 7.77 (1H, s). [M+H]+=216.
The compound was prepared from crude compound of Example 105(d) (0.798 g, 3.7 mmol), PPh3 (1.95 g, 7.4 mmol) and MeOH (20 ml) as described in Example 74(e). When all of the azide had reacted, the intermediate iminophosphorane was hydrolyzed with 2 M NaOH at RT. MeOH was evaporated and the aqueous layer was acidified with 4 M HCl and extracted with EtOAc. Aqueous layer was basified with 2 M NaOH and extracted with DCM. Combined DCM layers were washed with brine, dried and concentrated. Crude yield 0.527 g. [M+H]+=190.
The compound was prepared from crude compound of Example 105(e) (0.54 g, 2.9 mmol), DIPEA (1.22 ml, 0.9 g, 7 mmol) and DMSO (5 ml) as described in Example 74(f). Title compound was purified by column chromatography. Yield 0.737 g. 1H NMR (400 MHz, CDCl3): 0.47-0.53 (1H, m), 0.53-0.63 (2H, m), 0.67-0.73 (1H, m), 1.47 (1H, dt), 2.05-2.12 (1H, m), 2.55-2.70 (2H, m), 3.78 (1H, dd), 4.70 (1H, d), 5.90 (1H, d), 6.73 (1H, dd), 6.86-6.90 (1H, m), 7.11 (1H, s), 7.14 (1H, s), 7.55 (1H, d), 7.72 (1H, s). [M+H]+=359.
The compound was prepared from the compound of Example 105(f) (0.54 g, 1.5 mmol), NaH (0.121 g, 3.0 mmol) and iodoethane (0.182 ml, 0.353 g, 2.26 mmol) and DMF (15 ml) as described in Example 72(d). Crude product was purified by column chromatography. Yield 0.416 g. 1H NMR (400 MHz, CDCl3): 0.49-0.65 (4 H, m), 1.24 (3H, t), 1.54 (1H, dt), 2.00 (1H, dt), 2.59-2.75 (2H, m), 3.47-3.60 (2H, m), 4.37 (1H, br. s.), 5.71-5.75 (1H, m), 6.78-6.84 (1H, m), 6.96-7.00 (1H, m), 7.14 (2H, d), 7.57 (1H, d), 7.75 (1H, s). [M+H]+=387.
The compound was prepared from the compound of Example 105(f) (0.2 g, 0.56 mmol), NaH (0.067 g, 1.67 mmol) and iodomethane (0.069 ml, 0.158 g, 1.12 mmol) and DMF (4 ml) as described in Example 72(d). Crude product was purified by column chromatography. Yield 0.149 g. 1H NMR (400 MHz, CDCl3): 0.46-0.59 (4H, m), 1.64-1.73 (1H, m), 1.84-1.95 (1H, m), 2.55-2.66 (1H, m), 2.66-2.77 (1H, m), 2.99 (3H, s), 4.53 (1H, br. s.), 5.72-5.75 (1H, m), 6.86 (1H, dd), 7.00 (1H, s), 7.13 (1H, s), 7.17 (1H, s), 7.59 (1H, d), 7.76 (1H, s). [M+H]+=373.
The compound was prepared from spiro[2.5]octane-4,6-dione (1.38 g, 10 mmol), 4-amino-2-(trifluoromethyl)benzonitrile (1.86 g, 10 mmol), p-toluenesulfonic acid (0.038, 0.2 mmol) and toluene as described in Example 112(a). Yield 2.92 g. [M+H]+=307.
The compound was prepared from the compound of Example 107(a) (2.91 g, 9.5 mmol), NaBH4 (1.80 g+2×0.8 g, which were added after 24 h and 48 h) and MeOH (40 ml) as described in Example 112(b). Unreacted starting material was removed by column chromatography. Yield 1.72 g. [M+H]+=311.
The compound was prepared from the compound of Example 107(b) (1.54 g, 5.0 mmol), Dess-Martin periodinane (3.8 g, 9.0 mmol), pyridine (1.2 ml, 1.18 g, 14.9 mmol) and DCM (30 ml) as in Example 112(f). Crude product was purified by column chromatography. Yield 1.04 g. 1H NMR (400 MHz, CDCl3): 0.66-0.79 (2H, m), 1.11-1.18 (1H, m), 1.47 (1H, dd), 1.64-1.74 (1H, m), 1.79-1.90 (1H, m), 1.93-2.03 (1H, m), 2.27 (1H, m), 2.37 (1H, dd), 2.90 (1H, dd), 3.92-4.06 (1H, m), 4.52 (1H, d), 6.71 (1H, d), 6.87 (1H, s), 7.58 (1H, d). [M+H]+=309.
Imidazole (0.464 g, 6.8 mmol) was dissolved in DCM (4 ml). The mixture was cooled on an ice bath and SOCl2 (0.142 ml, 0.232 g, 1.95 mmol) was added. After 30 min of stirring compound of Example 107(c) (0.3 g, 0.97 mmol) in DCM (10 ml) was added. The mixture was stirred at RT for 20 h. The reaction was quenched with saturated NaHCO3 and pH was adjusted to 12 with 2 M NaOH. Aqueous layer was extracted with DCM. Combined organic layers were washed with water, dried and concentrated. Crude product was purified by column chromatography. Yield 0.049 g (impure). [M+H]+=359.
The compound was prepared from the compound of Example 107(d) (0.049 g), NaH (0.27 g, 0.68 mmol) and iodoethane (0.033 ml, 0.064 g, 0.41 mmol) and DMF (1 ml) as described in Example 72(d). Crude product was purified by preparative HPLC. Yield 0.012 g. 1H NMR (400 MHz, CDCl3): 0.62-0.74 (4H, m), 1.26 (3H, t), 1.43-1.50 (1H, m), 2.04-2.12 (2H, m), 2.21-2.30 (1H, m), 3.40-3.58 (2H, m), 4.70 (1H, m), 5.72-5.74 (1H, m), 6.83 (1H, s), 6.85 (1H, dd), 7.05 (1H, s), 7.08 (1H, d), 7.34 (1H, s), 7.60 (1H, dd). [M+H]+=387.
The compound was prepared from the compound of Example 107(d) (0.120 g, 0.34 mmol), NaH (0.027 g, 0.68 mmol) and iodomethane (0.031 ml, 0.071 g, 0.50 mmol) and DMF (4 ml) as described in Example 72(d). Crude product was purified by column chromatography and enantiomers were separated by chiral HPLC (Column: Daicel Chiralpak IA 20 mm×250 mm 5 μm, eluent A: n-hexane+0.2% DEA, solvent B: EtOH+0.2% DEA, isocratic B 10%, 20 ml/min) to obtain enantiomer 1 (yield 0.017 g, rt 37 min) and enantiomer 2 (yield 0.021 g, rt 47 min). 1H NMR (400 MHz, CDCl3): 0.60-0.67 (2H, m), 0.67-0.74 (2H, m), 1.45-1.52 (1H, m), 1.93-2.04 (1H, m), 2.04-2.12 (1H, m), 2.18-2.27 (1H, m), 3.01 (3H, s), 4.81 (1H, ddd), 5.72 (1H, dd), 6.85 (1H, t), 6.88 (1H, dd), 7.04-7.07 (2H, m), 7.36 (1H, t), 7.59-7.63 (1H, m). [M+H]+=373.
An oven-dried flask was charged with 4-(ethyl(3-hydroxycyclopentyl)amino)-2-(trifluoromethyl)benzonitrile (0.597 g, 2.0 mmol), THF (15 ml), phthalimide (0.383 g, 2.60 mmol) and triphenylphosphine (0.682 g, 2.60 mmol). The flask was placed on an ice bath and diisopropyl azodicarboxylate (0.512 ml, 0.526 g, 2.60 mmol) was added. The mixture was kept at 0° C. for 1.5 h before the cooling bath was removed. The mixture was stirred overnight at RT. The mixture was partitioned between water and EtOAc. The aqueous layer was extracted with EtOAc. Combined organic layers were dried and concentrated. Crude product was purified by column chromatography. Yield 1.26 g (a mixture of title compound and diisopropyl hydrazine-1,2-dicarboxylate). [M+H]+=428.
The flask was charged with the compound of Example 109(a) (1.26 g), ethanol (20 ml) and hydrazine monohydrate (0.409 ml, 0.422 g, 8.4 mmol). The mixture was refluxed for 2 h and cooled to RT. Et2O (30 ml) was added. The formed precipitate was filtered off and the mother liquor was concentrated to dryness. Et2O (20 ml) was added. The formed precipitate was filtered off and the mother liquor was concentrated. 4 M HCl in 1,4-dioxane (0.5 ml) was added. The HCl salt was filtered and washed with Et2O. The HCl salt was released with 2 M NaOH solution and the aqueous phase was extracted with EtOAc. Combined organic layers were dried and concentrated. Yield 0.415 g (3:2 mixture of diastereomers). [M+H]+=298.
The compound was prepared from the compound of Example 109(b) (0.415 g, 1.40 mmol), propionaldehyde (0.10 ml, 0.081 g, 1.40 mmol), tosylmethyl isocyanide (0.550 g, 2.82 mmol) and DBU (0.50 ml, 0.509 g, 2.4 mmol) in DCM (4 ml). Crude product was purified by column chromatography and all four enantiomers were separated by chiral HPLC (Column: Daicel Chiralpak IA 20 mm×250 mm 5 μm, solvent A: MTBE+0.2% DEA, solvent B: EtOH+0.2% DEA, isocratic B 3%, 20 ml/min) to obtain enantiomer 1 (yield 0.0255 g, rt 45 min) and enantiomer 2 (yield 0.0218 g, rt 67 min) of cis-diastereomer, 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.30 (3H, t), 1.91-2.04 (2H, m), 2.05-2.16 (1H, m), 2.16-2.26 (1H, m), 2.31-2.42 (1H, m), 2.54-2.63 (3H, m), 3.44 (2H, q), 4.27-4.37 (1H, m), 4.39-4.49 (1H, m), 6.81 (1H, m), 6.86 (1H, dd), 7.00 (1H, d), 7.59 (1H, dd), 7.60-7.63 (1H, m), [M+H]+=378, and enantiomer 1 (yield 0.0367 g, rt 36 min) and enantiomer 2 (yield 0.0322 g, rt 52 min) of trans-diastereomer, 1H NMR (400 MHz, CDCl3): 1.27 (3H, t), 1.31 (3H, t), 1.82-1.95 (1H, m), 2.00-2.11 (1H, m), 2.22 (2H, dd), 2.33 (1H, m), 2.47 (1H, m), 2.58 (2H, m), 3.44 (2H, q), 4.45-4.54 (1H, m), 4.57 (1H, m), 6.81 (1H, m), 6.84 (1H, dd), 6.98 (1H, d), 7.55-7.60 (2H, m), [M+H]+=378.
The compound was prepared from 4,4-dimethyl-1,3-cyclohexanedione (4.21 g, 30 mmol), 4-amino-2-trifluoromethylbenzonitrile (5.64 g, 30.3 mmol) and p-toluenesulfonic acid monohydrate (0.031 g, 0.2 mmol) in toluene (45 ml) as in Example 112(a). Yield 9.25 g. 1H NMR (400 MHz, DMSO-d6): 1.04 (6H, s), 1.79 (2H, t), 2.58 (2H, t), 5.55 (1H, s), 7.57-7.65 (2H, m), 8.01-8.07 (1H, m), 9.41 (1H, s).
The compound was prepared from the compound of Example 110(a) (9.09 g, 29.5 mmol) and NaBH4 (5.58 g, 148 mmol) in ethanol (60 ml) as described in Example 112(b). Yield 8.7 g. [M+H]+=313.
The compound was prepared from the compound of Example 110(b) (8.7 g, 27.9 mmol), sulphur trioxide-pyridine complex (5.76 g, 36.2 mmol) and triethylamine (19.4 ml, 14.1 g, 139 mmol) in DMSO (40 ml) as described in Example 80(a). [M+H]+=311.
The compound was prepared from the compound of Example 110(c) (1.24 g, 4.0 mmol), imidazole (1.63 g, 24.0 mmol), SOCl2 (0.53 ml, 0.86 g, 7.2 mmol) in DCM (20 ml) as in Example 107(d). Yield 1.19 g (impure). [M+H]+=361.
The compound was prepared from impure compound of Example 110(d) (0.5 g), NaH (0.111 g, 2.8 mmol), iodoethane (0.168 ml, 0.325 g, 2.08 mmol) and DMF (3 ml) as described in Example 72(d). Crude product was purified by preparative HPLC. Yield 0.018 g. 1H NMR (400 MHz, CDCl3): 0.96 (3H, s), 1.16 (3H, t), 1.19 (3H, s), 1.74-1.82 (2H, m), 1.86-1.96 (2H, m), 3.28-3.45 (2H, m), 4.46-4.52 (1H, m), 5.58 (1H, d), 6.77 (1H, dd), 6.85-6.89 (1H, m), 6.98 (1H, d), 6.99-7.04 (1H, m), 7.33-7.38 (1H, m), 7.47-7.54 (1H, m). [M+H]+=389.
The compound was prepared from impure compound of Example 110(d) (0.55 g), NaH (0.20 g, 5 mmol), iodoethane (0.2 ml, 0.456 g, 3.21 mmol) and DMF (4 ml) as described in Example 72(d). Crude product was purified by preparative HPLC. Yield 0.104 g. 1H NMR (400 MHz, CDCl3): 1.03 (3H, s), 1.27 (3H, s), 1.82-1.86 (2H, m), 1.86-1.93 (1H, m), 1.93-2.00 (1H, m), 2.95 (3H, s), 4.63-4.69 (1H, m), 5.63 (1H, dd), 6.86 (1H, dd), 6.95 (1H, t), 7.03 (1H, d), 7.10 (1H, t), 7.44 (1H, t), 7.61 (1H, d). [M+H]+=375.
4-Amino-2-chlorobenzonitrile (7.50 g, 49.2 mmol), cyclohexane-1,3-dione (5.79 g, 51.6 mmol) and p-toluenesulfonic acid monohydrate (1.74 g, 9.14 mmol) were boiled in toluene (300 ml) for 1 h using the Dean-Stark apparatus. The mixture was allowed to cool to RT. The precipitate was collected by filtration, washed with toluene and dried at vacuum. The crude product (13.16 g) was recrystallized from water (90 ml)/ethanol (70 ml) to afford the title product. Yield 10.45 g. 1H NMR (400 MHz, DMSO-d6): 1.91 (2H, m), 2.23 (2H, t), 2.53 (2H, t), 5.59 (1H, s), 7.28 (1H, dd), 7.40 (1H, d), 7.88 (1H, d), 9.28 (1H, s).
Sodium borohydride (9.60 g, 254 mmol) was added in portions to a solution of the compound of Example 112(a) (10.44 g, 42.3 mmol) in 200 ml of dry EtOH at RT under N2. The mixture was stirred at RT for 6 h. Water (40 ml) was added and ethanol evaporated. Water (150 ml) was added and stirring was continued overnight. The precipitate was collected by filtration, washed with water and dried at vacuum. The product (10.23 g) was a mixture of diastereomers (1H NMR x:y 67:33) and it was used as such in the next step.
Imidazole (8.33 g, 122 mmol) was added to a solution of the compound of Example 112(b) (10.23 g, 40.8 mmol) in 210 ml of DCM at 0° C., followed by tert-butyldimethylchlorosilane (9.22 g, 61.2 mmol). The mixture was stirred at 0° C. for 10 min and then at RT for 5 h. Water (80 ml) was added and the layers were separated. After another extraction with DCM the combined organic layers were washed with brine, dried, filtered and evaporated under reduced pressure. The crude product (16.29 g) was the mixture of diastereomers (1H NMR 68:32).
Sodium hydride (55% dispersion in mineral oil, 1.67 g, 38.4 mmol) was added in portions to a solution of the compound of Example 112(c) (7.00 g, 19.2 mmol) in 75 ml of dry DMF at 0° C. under a N2. The mixture was stirred at 0° C. for 30 min. Then tetrabutyl ammonium iodide (0.71 g, 1.9 mmol) was added. Iodoethane (7.48 g, 47.9 mmol) was added slowly at 0° C. The mixture was stirred for 30 min at 0° C. and for 2 h at RT. The mixture was quenched with saturated NH4Cl solution (75 ml) and water (50 ml). The product was extracted into toluene. The combined organic layers were washed with brine and water, dried, filtered and evaporated. The crude product (7.80 g) was a mixture of diastereomers (1H NMR 70:30).
Thionyl chloride (9.79 g, 82 mmol) was added slowly to a solution of the compound of Example 112(d) (7.79 g, 19.8 mmol) in 100 ml of dry methanol at 0° C. under N2. The solution was stirred at 0° C. for 15 min and at RT for 2 h. Solvents were evaporated. Ethyl acetate (80 ml) and 1 M NaOH solution (140 ml) were added. The water phase was extracted with ethyl acetate. Combined organic layers were washed with brine, dried, filtered and evaporated under reduced pressure. The crude product (5.69 g) was a mixture of diastereomers (1H NMR 68:32). The diastereomers were purified and separated by flash chromatography on silica gel using heptane-EtOAc as a gradient eluent (7:3-6:4). The major diastereomer: 1H NMR (400 MHz, CDCl3): 1.18 (3H, t), 1.42-1.96 (9H, m), 3.31 (2H, m), 4.16 (1H, m), 4.34 (1H, m), 6.63 (1H, dd), 6.74 (1H, d), 7.38 (1H, d). The minor diastereomer: 1H NMR (400 MHz, CDCl3): 1.20 (3H, t), 1.21-1.28 (1H, m), 1.38 (2H, m), 1.48 (1H, m), 1.73-1.85 (2H, m), 1.86-1.94 (1H, m), 1.99-2.19 (1H, m), 2.10-2.18 (1H, m), 3.34 (2H, q), 3.58-3.66 (1H, m), 3.69-3.79 (1H, m), 6.56 (1H, dd), 6.67 (1H, d), 7.39 (1H, d).
Dess-Martin periodinane (12.17 g, 28.7 mmol) was added in small portions to a solution of the compound of Example 112(e) (4.00 g, 14.4 mmol) in 220 ml of dry DCM at 0° C. at N2. The mixture was stirred at RT for 24 h. A saturated aqueous solution of NaHCO3 (50 ml) and a saturated aqueous solution of Na2S2O3 (50 ml) were added and stirring was continued for 15 min. The product was extracted into DCM. The combined organic layers were washed with brine, dried, filtered and evaporated. The crude product was triturated in isopropanol to give the title compound. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.66 (1H, m), 1.88 (1H, m), 2.04-2.19 (2H, m), 2.27-2.35 (1H, m), 2.44-2.63 (3H, m), 3.39 (2H, m), 3.96 (1H, m), 6.59 (1H, dd), 6.71 (1H, d), 7.43 (1H, d).
EtMgBr (3 M solution in diethyl ether, 1.78 ml, 5.3 mmol) was added to a solution of 4-iodo-1-tritylimidazole (2.06 g, 4.7 mmol) in 45 ml of dry DCM at RT at N2. The solution was stirred at RT for 2 h. Then the compound of Example 112(f) (870 mg, 3.1 mmol) in DCM (10 ml) was added slowly at RT. After stirring for 2 h at RT a saturated aqueous NH4Cl solution was added. The product was extracted into DCM. The combined organic layers were washed with brine, dried, filtered and evaporated. The crude product was used as such in the next step.
Trifluoroacetic acid (7 ml, 94 mmol) was added slowly to a solution of the compound of Example 112(g) (1.84 g, 3.1 mmol) in 15 ml of dry DCM at 0° C. under N2. After stirring at RT for 1.5 h the mixture was poured into ice water. The mixture was made alkaline with a saturated NaHCO3 solution. The product was extracted into DCM. The combined organic layers were washed with brine, dried, filtered and evaporated. The crude product was purified by flash chromatography on silica gel by using the CH2Cl2-MeOH as a gradient eluent (98:2-90:10) to give the product as a mixture of diastereomers (1H NMR 90:10). The major diastereomer: 1H NMR (400 MHz, CDCl3): 1.16 (3H, t), 1.55 (1H, m), 1.68-2.03 (6H, m), 2.10 (1H, d), 3.30 (2H, m), 4.26 (1H, m), 6.63 (1H, dd), 6.73 (1H, d), 6.88 (1H, s), 7.30 (1H, d), 7.51 (1H, s).
The compound of Example 112(h) (1.37 g, 4.0 mmol) was slowly added to concentrated sulfuric acid (30 ml) at 0° C. The temperature was then raised to RT, and the mixture was stirred for 30 min. The pH was then adjusted to 10-11 by addition of 5 M NaOH (cooling in an ice bath). The product was extracted into ethyl acetate. The combined organic layers were washed with water and brine, dried, filtered and concentrated in vacuum. The crude product was purified by flash chromatography on silica gel by using the CH2Cl2-MeOH as a gradient eluent (100:0-96:4) to give the title product. 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.82-1.94 (1H, m), 1.94-2.01 (1H, m), 2.40-2.52 (3H, m), 2.56-2.65 (1H, m), 3.40 (2H, m), 4.02-4.11 (1H, m), 6.35 (1H, broad s), 6.63 (1H, dd), 6.76 (1H, d), 6.93 (1H, s), 7.41 (1H, d), 7.61 (1H, d).
The compound of Example 112(c) (6.00 g, 16.4 mmol) in 75 ml of dry DMF was added slowly to sodium hydride (55% dispersion in mineral oil, washed with pentane, 1.44 g, 32.9 mmol) in 25 ml of dry DMF at 0° C. under N2. The mixture was stirred at 0° C. for 30 min. Iodomethane (5.83 g, 41.1 mmol) was added slowly at 0° C. and the mixture was stirred at 0° C. for 1 h and at RT for 3 h. The reaction mixture was quenched with a saturated NH4Cl solution. The product was extracted into toluene. The combined organic layers were washed with brine and water, dried, filtered and evaporated under reduced pressure. The crude product (5.51 g) was a mixture of diastereomers (1H NMR 73:27).
Thionyl chloride (7.50 g, 63.0 mmol) was added slowly to a solution of the compound of Example 113(a) (5.51 g, 14.5 mmol) in 75 ml of dry methanol at 25° C. under N2. The solution was stirred at RT for 18 h. Solvents were evaporated and ethyl acetate (100 ml) and water (50 ml) were added to the residue. The pH was adjusted to 8-9 by 1 M NaOH solution. The water phase was extracted with ethyl acetate. The combined organic layers were washed with water and brine, dried, filtered and evaporated. The crude product (3.83 g) was a mixture of diastereomers (1H NMR 70:30) and it was used as such in the next step.
Dess-Martin periodinane (15 w-% solution in DCM, 43.6 ml, 59.4 g, 21.0 mmol) was added dropwise to a solution of the compound of Example 113(b) (3.71 g, 14.0 mmol) in 150 ml of dry DCM at 4-5° C. under N2. The solution was stirred at RT for 17 h. Then a saturated solution of NaHCO3 (50 ml) and a saturated solution of Na2S2O3 (50 ml) were added and stirring was continued for 20 min. The product was extracted into DCM. The combined organic layers were washed with brine, dried over Na2SO4, filtered and evaporated. The crude product was purified by flash chromatography on silica gel using CH2Cl2-acetone (96:4) as an eluent. Yield 2.58 g. 1H NMR (400 MHz, DMSO-d6): 1.64-1.80 (2H, m), 1.87-1.97 (2H, m), 2.14-2.25 (2H, m), 2.35 (1H, td), 2.73 (1H, t), 2.87 (3H, s), 4.28 (1H, m), 6.85 (1H, dd), 7.03 (1H, d), 7.60 (1H, d).
The compound was prepared as in Example 112(g) using the compound of Example 113(c) as a starting material. The crude product was a mixture of diastereomers (LC-MS 76:24) and it was used as such in the next step.
The compound was prepared as in Example 112(h) using the compound of Example 113(d) as a starting material. The crude product was purified by flash chromatography on silica gel using the CH2Cl2-MeOH as a gradient eluent (100:0-90:10). The major diastereomer 1: 1H NMR (400 MHz, CDCl3): 1.53-1.66 (1H, m), 1.75 (1H, td), 1.80-1.92 (3H, m), 1.93-2.07 (3H, m), 2.83 (3H, s), 4.29 (1H, m), 6.68 (1H, dd), 6.78 (1H, d), 6.91 (1H, d), 7.40 (1H, d), 7.59 (1H, s). The enantiomers of the major diastereomer 1 and the minor diastereomer 2 (780 mg, 80:20) were separated by preparative chiral HPLC (Column Chiralpak IC 20 mm×250 mm 5 μm, A MTBE+0.2% DEA, B EtOH+0.2% DEA, isocratic B 5%, flow 20 ml/min, λ 300 nm) to yield 50.5 mg of diastereomer 2 (rt 11.0 min), 198.8 mg of enantiomer 1 of diastereomer 1 (rt 13.3 min) (and 181.2 mg of enantiomer 2 of diastereomer 1 (rt 25.0 min). The minor diastereomer: 1H NMR (400 MHz, MeOH-d4): 1.48-1.57 (1H, m), 1.60-1.70 (3H, m), 1.82-1.90 (2H, m), 2.46 (1H, m), 2.49-2.60 (1H, m), 2.91 (3H, s), 6.64 (1H, dd), 6.77 (1H, broad s), 7.14 (1H, s), 7.43 (1H, d), 7.71 (1H, d).
The compound was prepared as in Example 112(i) using the compound of Example 113(e), mixture of diastereomers, as a starting material. The crude product was purified by flash chromatography on silica gel using the CH2Cl2-MeOH as a gradient eluent (100:0-90:10). The product was triturated in ethyl acetate to obtain the title compound. 1H NMR (400 MHz, CDCl3): 1.85-1.92 (2H, m), 2.41-2.60 (4H, m), 2.91 (3H, s), 4.08 (1H, m), 6.37 (1H, broad s), 6.66 (1H, dd), 6.78 (1H, d), 6.94 (1H, s), 7.42 (1H, d), 7.70 (1H, d).
The compound was prepared as in Example 112(d) using 4-[3-(tert-butyldimethylsilyloxy)cyclohexylamino]-2-chlorobenzonitrile and benzyl bromide as starting materials. The crude product (mixture of diastereomers (1H NMR 70:30)) was used as such in the next step.
The compound was prepared as in Example 112(e) using the compound of Example 114(a) as a starting material. The product was extracted into ethyl acetate. The crude product was purified by flash chromatography on silica gel using CH2Cl2 as an eluent. The product was a mixture of diastereomers (1H NMR 67:33).
The compound was prepared as in Example 113(c) using the compound of Example 114(b) as a starting material. The crude product was purified by flash chromatography on silica gel using heptane-ethyl acetate (1:1) as an eluent. 1H NMR (400 MHz, CDCl3): 1.60-1.74 (1H, m), 1.74-1.87 (1H, m), 2.22-2.31 (2H, m), 2.43-2-53 (2H, m), 2.63-2.68 (1H, m), 4.15 (1H, m), 4.59 (2H, m), 6.57 (1H, dd), 6.73 (1H, d), 7.17 (2H, m), 7.27-7.31 (1H, m), 7.32-7.37 (2H, m), 7.38 (1H, d).
The compound was prepared as in Example 112(g) using the compound of Example 114(c) as a starting material. The crude product was used as such in the next step.
The compound was prepared as in Example 112(h) using the compound of Example 114(d) as a starting material. The crude product was purified by flash chromatography on silica gel using the CH2Cl2-MeOH as a gradient eluent (100:0-90:10). The product was a mixture of diastereomers (1H NMR 87:13).
The compound was prepared as in Example 112(i) using the compound of Example 114(e) as a starting material. The crude product was purified by flash chromatography on silica gel using the CH2Cl2-MeOH (95:5) as an eluent. 1H NMR (400 MHz, CDCl3): 1.73-1.84 (1H, m), 1.91-2.00 (1H, m), 2.34-2.50 (3H, m), 2.66-2.72 (1H, m), 4.21-4.29 (1H, m), 4.58 (2H, AB q), 6.31 (1H, broad s), 6.58 (1H, dd), 6.77 (1H, d), 6.87 (1H, d), 7.18-7.21 (2H, m), 7.23-7.28 (1H, m), 7.31-7.36 (3H, m), 7.57 (1H, d).
The compound of Example 112(c) (180 mg, 0.49 mmol) in 3 ml of dry DMF was added dropwise to sodium hydride (55% dispersion in mineral oil washed with pentane, 43 mg, 0.99 mmol) in 1 ml of dry DMF at 0° C. under N2. The mixture was stirred at 0° C. for 30 min. Then (bromomethyl)cyclopropane (166 mg, 1.23 mmol) was added at 0° C. The temperature was raised to RT, and the mixture was maintained at RT overnight and then at 50° C. for 4 h. The reaction mixture was quenched with ice water. The product was extracted into toluene. The combined organic layers were washed with brine and water, dried, filtered and evaporated under reduced pressure. The crude product was purified by CombiFlash using heptane-EtOAc as a gradient eluent (100:0-90:10). The product was a mixture of diastereomers (1H NMR 74:26).
The compound was prepared as in Example 112(e) using the compound of Example 115(a) as a starting material. The crude product was a mixture of diastereomers (1H NMR 74:26) and it was used as such in the next step.
The compound was prepared as in Example 113(c) using the compound of Example 115(b) as a starting material. The crude product was purified by flash chromatography on silica gel using DCM-acetone as a gradient eluent (100:0-98:2). 1H NMR (400 MHz, CDCl3): 0.64-0.70 (2H, m), 0.95 (1H, m), 1.60-1.73 (1H, m), 1.85 (1H, m), 2.05-2.19 (2H, m), 2.25-2.34 (1H, m), 2.44-2.66 (3H, m), 3.20 (2H, m), 3.95 (1H, m), 6.70 (1H, dd), 6.84 (1H, d), 7.44 (1H, d).
The compound was prepared as in Example 112(g) using the compound of Example 115(c) as a starting material. The crude product was used as such in the next step.
The title compound was prepared as in Example 112(h) using the compound of Example 115(d) as a starting material. The crude product was purified by flash chromatography on silica gel using the DCM-MeOH as a gradient eluent (100:0-98:2). The product was a mixture of diastereomers (1H NMR 85:15).
The title compound was prepared as in Example 112(i) using the compound of Example 115(e) as a starting material. The crude product was purified by flash chromatography on silica gel using the DCM-MeOH as a gradient eluent (100:0-95:5). 1H NMR (400 MHz, CDCl3): 0.29 (2H, m), 0.61-0.67 (2H, m), 0.99 (1H, m), 1.76-1.88 (1H, m), 1.93-2.02 (1H, m), 2.38-2.52 (3H, m), 2.58-2.67 (1H, m), 3.21 (2H, m), 4.00-4.10 (1H, m), 6.32 (1H, br s), 6.74 (1H, dd), 6.88 (1H, d), 6.94 (1H, s), 7.41 (1H, d), 7.60 (1H, s).
The compound was prepared as in Example 112(d) by using the compound of Example 112(c) and 1-iodopropane as starting materials. The mixture was stirred at RT for 48 h. The crude product was purified by flash chromatography on silica gel (eluent: 5-10% EtOAc/heptane) to obtain the product as a mixture of diastereomers (1H NMR 71:29).
The compound was prepared as in Example 112(e) using the compound of Example 116(a) as a starting material. The crude product was purified by flash chromatography on silica gel (eluent: 10-30% EtOAc/heptane) to obtain the product as a mixture of diastereomers. The major diastereomer: 1H NMR (400 MHz, CDCl3): 0.94 (3H, t), 1.41-1.96 (11H, m), 3.02-3.19 (2H, m), 4.15 (1H, m), 4.34 (1H, m), 6.60 (1H, dd), 6.71 (1H, d), 7.38 (1H, d). The minor diastereomer: 1H NMR (400 MHz, CDCl3): 0.95 (3H, t), 1.18-1.96 (9H, m), 2.04 (1H, m), 2.13 (1H, m), 3.10-3.18 (2H, m), 3.61 (1H, m), 3.74 (1H, m), 6.53 (1H, dd), 6.64 (1H, d), 7.39 (1H, d).
The compound was prepared as in Example 113(c) using the compound of Example 116(b) as a starting material. The crude product was recrystallized in 2-propanol. 1H NMR (400 MHz, DMSO-d6): 0.92 (3H, t), 1.50 (2H, m), 1.69 (1H, m), 1.77-1.98 (3H, m), 2.21 (2H, m), 2.38 (1H, m), 2.72 (1H, m), 3.18-3.35 (2H, m), 4.21-4.29 (1H, m), 6.80 (1H, dd), 6.98 (1H, d), 7.60 (1H, d).
The compound was prepared as in Example 112(g) using the compound of Example 116(c) as a starting material. The product was extracted into EtOAc and it was used as such in the next step.
The compound was prepared as in Example 112(h) using the compound of Example 116(d) as a starting material. The crude product was purified by flash chromatography on silica gel (eluent: 0-5% MeOH/DCM to give the pure product as a mixture of diastereomers (1H NMR 89:11). The major diastereomer: 1H NMR (400 MHz, CDCl3): 0.93 (3H, t), 1.47-1.64 (3H, m), 1.70-2.10 (7H, m), 3.13 (2H, m), 4.26 (1H, m), 6.62 (1H, dd), 6.72 (1H, d), 6.91 (1H, s), 7.36 (1H, d), 7.58 (1H, s).
The compound was prepared as in Example 112(i) using the compound of Example 116(e) as a starting material. The crude product was purified by flash chromatography on silica gel (eluent: 0-5% MeOH/DCM). 1H NMR (400 MHz, CDCl3): 0.97 (3H, t), 1.65 (2H, m), 1.80-1.93 (1H, m), 1.93-2.00 (1H, m), 2.37-2.50 (3H, m), 2.54-2.63 (1H, m), 3.22 (2H, m), 4.00-4.10 (1H, m), 6.35 (1H, br s), 6.60 (1H, dd), 6.73 (1H, d), 6.93 (1H, s), 7.40 (1H, d), 7.61 (1H, s).
4-Amino-2-(trifluoromethyl)benzonitrile (20.00 g, 107 mmol), cyclohexane-1,3-dione (13.25 g, 118 mmol) and p-toluenesulfonic acid pyridine salt (1.35 g, 5.37 mmol) were boiled in toluene (400 ml) for 2 h using the Dean-Stark apparatus. Then, the mixture was cooled to RT. The precipitate was collected by filtration, washed with toluene and dried. Yield 30 g. 1H NMR (400 MHz, DMSO-d6): 1.93 (2H, m), 2.25 (2H, t), 2.55 (2H, t), 5.65 (1H, s), 7.59-7.62 (2H, m), 8.06 (1H, d), 9.44 (1H, s).
The compound was prepared as in Example 112(b) using the compound of Example 117(a) as a starting material. The product was a mixture of diastereomers (1H NMR 61:39). Yield 98%.
The compound was prepared as in Example 112(c) using the compound of Example 117(b) as a starting material. The crude product (mixture of diastereomers 1H NMR 67:33) was triturated in heptane. The precipitate was the major isomer. The major diastereomer: 1H NMR (400 MHz, CDCl3): 0.06 (3H, s), 0.07 (3H, s), 0.92 (9H, s), 1.19 (1H, m), 1.28 (1H, m), 1.40 (1H, m), 1.57-1.70 (2H, m), 1.86 (1H, m), 2.03 (2H, m), 3.81 (1H, m), 4.16 (1H, m), 4.22 (1H, m), 6.65 (1H, dd), 6.82 (1H, d), 7.52 (1H, d).
The compound was prepared as in Example 112(d) using the compound of Example 117(c) as a starting material. The crude product was a mixture of diastereomers (1H NMR 68:32) and it was used as such in the next step.
The compound was prepared as in Example 112(e) using the compound of Example 117(d) as a starting material. The crude product was a mixture of diastereomers (1H NMR 66:34). The diastereomers were purified and separated by flash chromatography on silica gel (eluent: 30-40% EtOAc/heptane). The major diastereomer: 1H NMR (400 MHz, CDCl3): 1.20 (3H, t), 1.43-1.59 (3H, m), 1.64 (1H, m), 1.69-1.76 (1H, m), 1.78 (1H, m), 1.90 (3H, m), 3.36 (2H, m), 4.23 (1H, m), 4.35 (1H, m), 6.85 (1H, dd), 6.99 (1H, d), 7.54 (1H, d).
The compound was prepared as in Example 112(f) using the compound of Example 117(e) as a starting material. The crude product was triturated in isopropanol to give the title compound. 1H NMR (400 MHz, DMSO-d6): 1.13 (3H, t), 1.65-1.79 (1H, m), 1.80-1.89 (1H, m), 1.90-2.00 (2H, m), 2.18-2.30 (2H, m), 2.39 (1H, m), 2.75 (1H, m), 3.50 (2H, m), 4.37 (1H, m), 7.07-7.13 (2H, m), 7.78 (1H, d).
To a stirred solution of 4-iodo-1-tritylimidazole (2.1 g, 4.81 mmol) in dry DCM (50 ml) was added EtMgBr (3 M solution in diethylether, 1.82 ml). The mixture was stirred at RT for 2 h. The compound of Example 117(f) (1.0 g, 3.22 mmol) in dry DCM (10 ml) was added dropwise and the mixture was stirred at RT overnight. The reaction was quenched by saturated aqueous NH4Cl solution and extracted with EtOAc, washed with brine, dried, filtered and concentrated. The crude product was purified by column chromatography over silica gel using CH3OH: DCM (2%) as the eluent to give white solid, yield: 1.1 g MS: m/z 621 [M+H]. The mixture was dissolved to THF (20 ml) and water (2 ml), and 20 ml of formic acid was added. The mixture was stirred at 65° C. for 4 h. The solvent was removed in vacuo. The crude was basified by saturated aqueous NaHCO3 solution and extracted with EtOAc, washed with brine, dried, filtered and concentrated under reduced pressure. The crude product was purified by column chromatography over silica gel using CH3OH: DCM (4%) as the eluent to give diastereomer 1 as white solid. Yield 150 mg. 1H-NMR (400 MHz, DMSO-d6): 12.25 (bs, 1H), 7.79 (d, 1H), 7.64 (s, 1H), 7.04 (s, 1H), 7.03 (d, 1H), 6.91 (s, 1H), 5.02 (s, 1H), 4.23 (mc, 1H), 3.41-3.48 (m, 2H), 1.53-1.94 (m, 8H), 1.17 (bt, 3H). m/z 379 [M+H].
To the compound of Example 117(g) (900 mg, 2.38 mmol) was added concentrated H2SO4 (10 ml) at 0° C. and stirred for 15 min followed by stirring at RT for 30 min. The mixture was basified with 5 N NaOH solution and extracted with EtOAc, washed with brine, dried, filtered and concentrated. The crude product was purified by column chromatography over silica gel using CH3OH: DCM (3%) as the eluent to give 560 mg of the title compound. 1H-NMR (400 MHz; DMSO-d6): δ 11.93 (bs, 1H), 7.75 (d, 1H), 7.56 (s, 1H), 7.10 (d, 1H), 7.09 (s, 1H), 7.02 (bs, 1H), 6.23 (bs, 1H) 4.20 (me, 1H), 3.43-3.56 (m, 2H), 2.29-2.42 (m, 4H), 1.84-1.90 (m, 2H), 1.15 (t, 3H); MS: m/z 361 [M+H].
The title compounds were prepared as in Example 112(g) using the mixture of 4-iodo-5-methyl-1-trityl-1H-imidazole and 5-iodo-4-methyl-1-trityl-1H-imidazole (prepared according to WO 2008/86131) and the compound of Example 117(f) as starting materials. The mixture was stirred for 22 h. The mixture of products was used as such in the next step.
The compound was prepared as in Example 112(h) using the mixture of Example 118(a) as a starting material. The mixture was stirred at RT overnight. The crude product was purified by flash chromatography on silica gel (eluent: 0-10% MeOH/DCM) to obtain the title compound as a mixture of diastereomers. The major diastereomer: 1H NMR (400 MHz, MeOH-d4): 1.20 (3H, t), 1.68 (1H, m), 1.74-2.03 (6H, m), 2.09 (1H, m), 2.35 (3H, s), 3.48 (2H, m), 4.36 (1H, m), 7.05 (1H, dd), 7.12 (1H, d), 7.41 (1H, s), 7.63 (1H, d).
The compound was prepared as in Example 112(i) using the compound of Example 118(b) as a starting material. The crude product was purified by flash chromatography on silica (eluent: 0-2% MeOH/DCM) to obtain the title product. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.81-2.00 (2H, m), 2.32 (3H, s), 2.39-2.58 (3H, m), 2.75 (1H, m), 3.42 (2H, m), 4.08 (1H, m), 5.89 (1H, br s), 6.81 (1H, dd), 6.97 (1H, d), 7.43 (1H, s), 7.50 (1H, d).
Iodoethane (4.72 g, 30.3 mmol) was added to the mixture of 4-iodo-5-methyl-1H-imidazole (4.50 g, 21.63 mmol), tetrabutylammonium bromide (237 mg, 0.74 mmol), 70 ml of toluene and 25 ml of 50% NaOH at 55° C. The mixture was stirred at 55-74° C. for 3 h. Water was then added and the products were extracted into toluene. The combined organic layers were washed with water, dried and evaporated. Yield 5.07 g. The crude product was the mixture of 1-ethyl-4-iodo-5-methyl-1H-imidazole and 1-ethyl-5-iodo-4-methyl-1H-imidazole (ratio 56:44). The isomers were separated by flash chromatography on silica gel (eluent: heptane-EtOAc 6:4). The major isomer 1-ethyl-4-iodo-5-methyl-1H-imidazole was confirmed by NMR techniques (1H NMR, 13CPD, HSQC and HMBC). 1-Ethyl-4-iodo-5-methyl-1H-imidazole: 1H NMR (400 MHz, CDCl3): 1.39 (3H, t), 2.21 (3H, s), 3.92 (2H, q), 7.42 (1H, s). 1-Ethyl-5-iodo-4-methyl-1H-imidazole: 1H NMR (400 MHz, CDCl3): 1.40 (3H, t), 2.23 (3H, s), 3.91 (2H, q), 7.61 (1H, s).
The compound was prepared as in Example 112(g) using 1-ethyl-4-iodo-5-methyl-1H-imidazole (Example 119(a)) and the compound of Example 117(f) as starting materials. The mixture was stirred overnight. The product was extracted into EtOAc and purified by flash chromatography on silica gel (eluent: 0-1% MeOH/DCM) to obtain the title compound as a mixture of diastereomers (1H NMR x:y 84:16). The major diastereomer: 1H NMR (400 MHz, CDCl3): 1.20 (3H, t), 1.39 (3H, t), 1.55-1.67 (2H, m), 1.78-2.04 (6H, m), 2.33 (3H, s), 2.92 (1H, s), 3.39 (2H, m), 3.86 (2H, q), 4.34 (1H, m), 6.89 (1H, dd), 7.03 (1H, d), 7.33 (1H, s), 7.54 (1H, d).
The title compound was prepared as in Example 112(i) using the compound of Example 119(b) as a starting material. The crude product was purified by flash chromatography on silica gel using DCM as an eluent and then by the preparative HPLC to obtain the title product. 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.40 (3H, t), 1.82-1.98 (2H, m), 2.29 (3H, s), 2.41-2.48 (2H, m), 2.52-2.63 (1H, m), 2.81 (1H, m), 3.44 (2H, m), 3.89 (2H, q), 4.10 (1H, m), 5.85 (1H, m), 6.85 (1H, dd), 6.99 (1H, d), 7.38 (1H, s), 7.55 (1H, d).
The compound was prepared as in Example 119(b) using 1-ethyl-5-iodo-4-methyl-1H-imidazole (Example 119(a)) and the compound of Example 117(f) as starting materials. The crude product (mixture of diastereomers) was purified by flash chromatography on silica gel using DCM as an eluent.
The compound was prepared as in Example 112(i) using the compound of Example 120(a) as a starting material. The crude product was purified by flash chromatography on silica gel using DCM-MeOH (95:5) as an eluent. 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.38 (3H, t), 1.85-1.97 (1H, m), 1.98-2.07 (1H, m), 2.17 (3H, s), 2.30-2.52 (4H, m), 3.43 (2H, m), 3.84 (2H, q), 4.04-4.13 (1H, m), 5.79 (1H, br s), 6.83 (1H, dd), 6.99 (1H, d), 7.36 (1H, s), 7.59 (1H, d).
The compound was prepared as in Example 112(g) using 4-iodo-2-methyl-1-trityl-1H-imidazole (prepared as in Sebhat I. K. et al., ACS Medicinal Chemistry Letters 2(1), 43, 2011) and the compound of Example 117(f) as starting materials. The crude product was used as such in the next step.
The compound was prepared as in Example 112(h) using the compound of Example 121(a) as a starting material by stirring at RT for 27 h. The crude product was stirred in DCM/MeOH and filtered. The filtrate was evaporated to afford the crude product which was purified by CombiFlash (eluent: 5-20% MeOH/DCM) to obtain the title product as a mixture of diastereomers (1H NMR 87:13). The major diastereomer: 1H NMR (400 MHz, CDCl3): 1.19 (3H, t), 1.59 (1H, m), 1.67-2.04 (6H, m), 2.09 (1H, m), 2.41 (3H, s), 3.37 (2H, m), 4.32 (1H, m), 6.76 (1H, s), 6.89 (1H, dd), 6.99 (1H, d), 7.52 (1H, d).
The compound was prepared as in Example 112(i) using the compound of Example 121(b) as a starting material. The crude product was purified by CombiFlash (column silica, eluent: 1st 5-10% MeOH/DCM and 2nd 40% acetone/DCM) to obtain the title compound. 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 1.82-2.01 (2H, m), 2.42 (3H, s), 2.38-2.50 (3H, m), 2.57 (1H, m), 3.44 (2H, m), 4.06-4.15 (1H, m), 6.32 (1H, br s), 6.77 (1H, s), 6.84 (1H, dd), 6.99 (1H, d), 7.56 (1H, d).
Benzyl 2-bromoethyl ether (11.53 g, 53.6 mmol) was added to the mixture of 4-iodo-1H-imidazole (10.00 g, 51.6 mmol), TBABr (565 mg, 1.75 mmol), 150 ml of toluene and 50 ml of 50% NaOH at 90° C. The mixture was heated at 90° C. for 3 h and then cooled to RT. Water (500 ml) was added and the products were extracted into toluene. The combined organic layers were washed with water, dried and evaporated. The residue (yield 16.19 g) was a mixture of isomers (1H NMR: ratio 71:29) which were purified and separated by reversed-phase chromatography to obtain 1-[2-(Benzyloxy)ethyl]-4-iodo-1H-imidazole (yield 9.00 g), 1H NMR (400 MHz, CDCl3): 3.67 (2H, t), 4.09 (2H, t), 4.50 (2H, s), 7.05 (1H, d), 7.22-7.25 (2H, m), 7.28-7.38 (3H, m), 7.43 (1H, d), and 1-[2-(Benzyloxy)ethyl]-5-iodo-1H-imidazole (yield 3.20 g), 1H NMR (400 MHz, CDCl3): 3.70 (2H, t), 4.12 (2H, t), 4.48 (2H, s), 7.13 (1H, d), 7.22-7.25 (2H, m), 7.27-7.36 (3H, m), 7.74 (1H, d).
The compound was prepared as in Example 112(g) using 1-[2-(benzyloxy)ethyl]-4-iodo-1H-imidazole (Example 122(a)) and the compound of Example 117(f) as starting materials. The crude product was purified by flash chromatography on silica gel (eluent: 0-1% MeOH/DCM).
The title compound was prepared as in Example 112(i) using the compound of Example 122(b) as a starting material. The crude product was first purified by flash chromatography on silica gel (eluent: 0-10% MeOH/DCM). Then, the product was dissolved in methanol, the solution was filtered and the filtrate was made alkaline by adding 1 M NaOH. The title compound (LC-MS FW 484) was extracted into ethyl acetate. 1H NMR (400 MHz, DMSO-d6): 1.17 (3H, t), 1.79-1.91 (2H, m), 2.26-2.5 (4H, m), 3.50 (2H, m), 3.94 (2H, t), 4.09 (2H, t), 4.20 (1H, m), 6.26 (1H, m), 7.09-7.14 (3H, m), 7.51 (1H, s), 7.76 (1H, d).
The compound of Example 122(c) (140 mg, 0.289 mmol) in the mixture of 1.5 ml of ethanol and 6 ml of 10% HCl was boiled for 1.5 h. Then, the cooled solution was made alkaline with 5 M NaOH. The product was extracted into ethyl acetate. The combined organic layers were washed with brine and water, dried and evaporated. The residue was purified first by flash chromatography on silica gel using CH2Cl2-MeOH (98:2) as an eluent and then by preparative HPLC. Yield 28.4 mg. 1H NMR (400 MHz, CDCl3): 1.27 (3H, t), 1.83-2.02 (2H, m), 2.40-2.52 (3H, m), 2.60 (1H, m), 3.45 (2H, m), 3.90 (2H, t), 4.05 (2H, t), 4.07-4.16 (1H, m), 6.44 (1H, br s), 6.85 (1H, dd), 6.88 (1H, s), 7.00 (1H, d), 7.48 (1H, s), 7.57 (1H, d).
The compound was prepared as in Example 112(g) using 1-[2-(benzyloxy)ethyl]-5-iodo-1H-imidazole (Example 122(a)) and the compound of Example 117(f). The mixture was stirred overnight. The title compound was obtained as mixture of diastereomers (LC-MS 80:20). The crude product was purified first by flash chromatography on silica gel (eluent: 0-2% MeOH/DCM) and then by trituration in diethyl ether at RT.
The compound was prepared as in Example 112(g) using the compound of Example 123(a) as a starting material and ethyl acetate as an extraction solvent. The crude product (LC-MS FW 484) was purified by flash chromatography on silica gel (eluent: 0-20% MeOH/DCM).
The compound was prepared as in Example 122(d) using the compound of Example 123(b) as a starting material. The title compound was purified first by flash chromatography (eluent: 0-5% MeOH/DCM) and then by preparative HPLC. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.81-1.92 (1H, m), 1.94-2.04 (1H, m), 2.35-2.53 (4H, m), 3.12 (1H, br s), 3.42 (2H, m), 3.88 (2H, t), 4.01-4.12 (3H, m), 5.86 (1H, m), 6.79 (1H, s), 6.84 (1H, dd), 6.98 (1H, d), 7.41 (1H, s), 7.57 (1H, d).
The compound was prepared as in Example 112(g) using 1-[2-(benzyloxy)ethyl]-5-iodo-1H-imidazole of Example 122(a) and the compound of Example 150(d) and stirring the mixture overnight. The crude product was purified by flash chromatography using DCM-MeOH (98:2) as an eluent. The title product was a mixture of diastereomers (2:1).
The title compound was prepared as in Example 112(i) using the compound of Example 124(a) as a starting material. The product was purified first by flash chromatography (eluent: 0-10% MeOH/DCM) and then by preparative HPLC. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 2.70 (1H, m), 2.83 (1H, m), 2.98 (1H, m), 3.07 (1H, m), 3.46 (2H, q), 3.96 (2H, t), 4.22 (2H, t), 4.64 (1H, m), 5.88 (1H, m), 6.79 (1H, dd), 6.92 (1H, s), 6.96 (1H, d), 7.49 (1H, s), 7.57 (1H, d).
A microwave oven reaction tube was charged with the compound of Example 112 (50 mg, 0.153 mmol), yttrium(III)nitrate hexahydrate (1.6 mg, 0.00428 mmol), THF (1.7 ml) and 2,2-dimethyloxirane (0.137 ml, 110 mg, 1.53 mmol). The mixture was stirred at 80° C. for 20 min in a microwave oven. The solvent was evaporated, and EtOAc was added to the residue. Then the solution was washed with water and dried over Na2SO4. After evaporation of the solvent the residue was purified first by flash chromatography on silica gel (eluent: 0-20% MeOH/DCM) and then by preparative HPLC to obtain the title product (yield 11 mg). 1H NMR (400 MHz, CDCl3): 1.23 (6H, s), 1.25 (3H, t), 1.80-2.00 (2H, m), 2.36-2.52 (3H, m), 2.56 (1H, m), 2.87 (1 h, br s), 3.39 (2H, m), 3.84 (2H, s), 4.05 (1H, m), 6.43 (1H, m), 6.63 (1H, dd), 6.75 (1H, d), 6.87 (1H, s), 7.41 (1H, d), 7.55 (1H, s).
Iodoethane (0.125 ml, 243 mg, 1.56 mmol) was added to the mixture of the compound of Example 121 (417 mg, 1.11 mmol), TBABr (12.2 mg, 0.038 mmol), 6.5 ml of toluene and 2.5 ml of 50% NaOH in water at 60° C. The mixture was stirred at 60° C. for 3 h. Water was then added and the product was extracted into toluene. The combined organic layers were washed with water, dried and evaporated to afford the crude product which was purified first by flash chromatography on silica gel using EtOAc as an eluent and then by preparative HPLC. 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 1.36 (3H, t), 1.82-2.01 (2H, m), 2.37 (3H, s), 2.38-2.50 (3H, m), 2.51-2.60 (1H, m), 3.44 (2H, m), 3.84 (2H, q), 4.10 (1H, m), 6.39 (1H, m), 6.70 (1H, s), 6.84 (1H, dd), 6.99 (1H, d), 7.56 (1H, d).
The compound of Example 150 (328 mg, 0.947 mmol) in 2 ml of dry DMF was added to sodium hydride (55% dispersion in mineral oil washed with pentane, 83 mg, 1.89 mmol) in 1 ml of dry DMF at 0° C. under N2. The mixture was stirred at 0° C. for 30 min. Iodoethane (0.098 ml, 192 mg, 1.23 mmol) was then added. The mixture was stirred at 0° C. for 30 min and then at RT for 1.5 h. The mixture was poured into the icecold saturated aqueous NH4Cl solution (4 ml). Water (3 ml) was added and the product was extracted into EtOAc. The combined organic layers were washed with brine and water, dried, filtered and evaporated to afford 1,4- and 1,5-isomers (70:30) which were purified and separated first by flash chromatography and then by preparative HPLC. 1,4-isomer: 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.47 (3H, t), 2.59-2.77 (2H, m), 2.93 (1H, m), 3.03 (1H, m), 3.46 (2H, q), 3.98 (2H, q), 4.69 (1H, m), 6.22 (1H, m), 6.80 (1H, dd), 6.84 (1H, s), 6.99 (1H, d), 7.50 (1H, s), 7.56 (1H, d). 1,5-isomer: 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.49 (3H, t), 2.66-2.77 (1H, m), 2.81-2.90 (1H, m), 3.00 (1H, m), 3.10 (1H, m), 3.46 (2H, q), 4.13 (2H, q), 4.67 (1H, m), 5.89 (1H, m), 6.81 (1H, dd), 6.98 (1H, d), 7.02 (1H, s), 7.56 (1H, s), 7.58 (1H, d).
To a solution of the compound of Example 80 (1.34 g, 4.03 mmol) in dry DMF (15 ml) was added triethylamine (0.843 ml, 612 mg, 6.05 mmol), followed by triphenylmethyl chloride (1.24 g, 4.44 mmol). The mixture was stirred at RT overnight. Then, the mixture was poured into 60 ml of water and stirred for 2 h. The precipitate was filtered and dried at vacuum. Crystallization in EtOAc-heptane afforded the title compound. Yield 2.29 g. 1H NMR (400 MHz, CDCl3): 1.67-1.80 (1H, m), 1.89-2.01 (1H, m), 2.16-2.27 (1H, m), 2.27-2.40 (2H, m), 2.71 (1H, m), 3.83 (1H, m), 4.64 (1H, d), 6.48 (1H, m), 6.67 (1H, dd), 6.70 (1H, s), 6.83 (1H, d), 7.09-7.18 (6H, m), 7.26-7.37 (9H, m), 7.41 (1H, d), 7.52 (1H, d).
Sodium hydride (55% dispersion in mineral oil, 346 mg, 7.94 mmol) was added in portions to a solution of the compound of Example 128(a) (2.28 g, 3.97 mmol) in 20 ml of dry DMF at 0° C. under N2. The mixture was stirred for 30 min. Tetrabutyl ammonium iodide (220 mg, 0.60 mmol) was added, followed by 2-(2-bromoethoxy)tetrahydro-2H-pyran (0.90 ml, 1.24 g, 5.95 mmol) at 0° C. The mixture was stirred at 0° C. for 7 h and at RT overnight. The mixture was quenched with saturated aqueous NH4Cl solution. The product was extracted into EtOAc. The combined organic layers were washed with brine and water, dried, filtered and evaporated. The crude product was used as such in the next step.
20% HCl in ethanol (12 ml) was added to a solution of the compound of Example 128(b) in ethanol (60 ml). The solution was stirred at RT for 1.5 h. Ethanol was evaporated and water was added to the residue. The solution was made alkaline (pH 9) with aqueous NaOH solution. The product was extracted into ethyl acetate. The combined organic layers were washed water, dried and concentrated. The product was purified first by flash chromatography on silica gel (eluent: 0-4% MeOH/DCM) and then by preparative HPLC. Yield 0.16 g. 1H NMR (400 MHz, CDCl3): 1.78-1.96 (2H, m), 2.12 (1H, t), 2.37-2.55 (4H, m), 3.53 (2H, m), 3.79 (2H, m), 4.04-4.13 (1H, m), 6.39 (1H, m), 6.70 (1H, s), 6.92 (1H, dd), 7.08 (1H, d), 7.10-7.17 (6H, m), 7.29-7.37 (9H, m), 7.40 (1H, d), 7.56 (1H, d).
The compound was prepared as in Example 112(h) using the compound of Example 128(c) as a starting material. The product was purified first by flash chromatography (eluent: 1-5% MeOH/DCM) and then by preparative HPLC. Yield 3.0 mg. 1H NMR (400 MHz, CDCl3): 1.84-2.00 (2H, m), 2.42-2.69 (4H, m), 3.54 (2H, m), 3.82-3.88 (2H, m), 4.14 (1H, m), 6.46 (1H, br s), 6.93 (1H, s), 6.97 (1H, dd), 7.13 (1H, d), 7.58 (1H, s), 7.61 (1H, d).
The compound was prepared as in Example 128(b) using the compound of Example 128(a) and allylbromide as starting materials and stirring the reaction mixture at RT for 4.5 h. The product was extracted into EtOAc. The crude product was used as such in the next step.
The title compound was prepared as in Example 112(h) using the compound of Example 129(a) as a starting material. The product was purified first by flash chromatography (eluent: 1-5% MeOH/DCM) and then by preparative HPLC. Yield 2.7 mg. 1H NMR (400 MHz, CDCl3): 1.85 (1H, m), 1.95-2.04 (1H, m), 2.41-2.53 (3H, m), 2.64 (1H, m), 3.92-4.10 (2H, m), 4.14-4.26 (1H, m), 5.19-5.28 (2H, m), 5.87 (1H, m), 6.50 (1H, br s), 6.87 (1H, dd), 6.91 (1H, s), 7.02 (1H, d), 7.57 (1H, d), 7.62 (1H, s), 9.10 (1H, br s).
The compound was prepared from the compound of Example 96(f) (2.50 g, 6.94 mmol) in 15 ml of dry DMF, sodium hydride (60% dispersion in mineral oil, 555 mg, 13.87 mmol) in 11 ml of dry DMF and iodomethane (0.71 ml, 1.62 g, 10.41 mmol). The crude product (2.48 g) was recrystallized in EtOAc-heptane (4 ml: 1 ml) to afford the title product. Yield 1.60 g, 62%. 1H NMR (400 MHz, CDCl3): 0.98 (3H, s), 1.11 (3H, s), 1.78 (2H, m), 2.51-2.60 (1H, m), 2.64-2.73 (1H, m), 2.98 (3H, s), 4.55 (1H, d), 5.63 (1H, m), 6.94 (1H, dd), 7.09 (1H, d), 7.14 (1H, s), 7.17 (1H, s), 7.62 (1H, d), 7.77 (1H, s). The enantiomers of the racemic mixture (1.50 g) were separated by preparative chiral HPLC (Column Chiralpak IA 20 mm×250 mm 5 um, A MTBE+0.1% DEA, B IPA+0.1% DEA, isocratic B 10%, flow 15 m/min, 300 nm) to yield 523.7 mg of enantiomer 1 (rt 11.4 min) and 497.2 mg of enantiomer 2 (rt 15.9 min).
A reaction flask was charged with 3-(1H-imidazol-1-yl)-6,6-dimethylcyclohex-2-enamine of Example 96(e) (650 mg, 3.40 mmol), 7 ml of dry DMSO, 4-fluoro-1-nitro-2-(trifluoromethyl)benzene (725 mg, 3.47 mmol) and DIPEA (1.50 ml, 1.11 g, 8.60 mmol). The mixture was heated at 80° C. for 1 h 45 min. The mixture was cooled to RT and water was added. The product was extracted into EtOAc. The combined organic layers were washed with water and brine, dried and evaporated. The residue (1.2 g) was triturated in boiling DCM (5 ml). The precipitate was filtered and dried under vacuum to afford the title product. Yield 514 mg, 40%. 1H NMR (400 MHz, CDCl3): 1.13 (3H, s), 1.29 (3H, s), 1.73-1.85 (2H, m), 2.50-2.64 (2H, m), 4.03-4.08 (1H, m), 4.58 (1H, d), 5.63-5.65 (1H, m), 6.76 (1H, dd), 6.97 (1H, d), 7.10 (1H, m), 7.12 (1H, m), 7.70 (1H, m), 8.03 (1H, d).
The compound was prepared as in Example 130 using the compound of Example 131(a) as a starting material. The product was purified by flash chromatography (eluent: 0-1% MeOH/DCM) to afford the title product. 1H NMR (400 MHz, CDCl3): 0.99 (3H, s), 1.12 (3H, s), 1.73-1.86 (2H, m), 2.51-2.62 (1H, m), 2.63-2.74 (1H, m), 3.02 (3H, s), 4.59 (1H, m), 5.64 (1H, m), 6.91 (1H, dd), 7.10-7.22 (3H, m), 7.78 (1H, s), 8.07 (1H, d).
A mixture of 1,3-cyclopentanedione (3.53 g, 31.5 mmol), 4-amino-2-chloro-6-fluorobenzonitrile (5.12 g, 30 mmol) and TsOH (0.285 g, 1.5 mmol) in toluene (90 ml) was refluxed in a Dean-Stark apparatus until no more water separated. The mixture was cooled to RT and the solid product was collected. The solid was washed with 0.5 M NaOH, ice cold ethanol and ether, and dried in vacuo to afford 7.36 g of the title compound. 1H NMR (400 MHz, MeOH-d4): 2.04 (2H, m), 2.39 (2H, t), 2.60 (2H, t), 5.78 (1H, s), 7.15 (1H, dd), 7.26 (1H, m).
Sodium borohydride (5.15 g, 136 mmol) was added stepwise to a cooled mixture of the compound of Example 132(a) (6.0 g, 22.67 mmol) and ethanol (125 ml). After 3.5 h of stirring at RT the reaction was quenched with water. The mixture was slowly stirred at RT overnight after which it was filtered. The solid product was washed with water and dried in vacuo to afford 6.0 g of the title compound as a mixture of diastereomers (ratio 65:35 by NMR). LC-MS: m/z=269.08 (M+1)+.
tert-Butyldimethylchlorosilane (3.70 g, 24.56 mmol) was added stepwise to a mixture of the compound of Example 132(b) (6.0 g, 22.33 mmol) and imidazole (2.28 g, 33.5 mmol) in DMF (25 ml). After 5 h of stirring at RT the reaction was quenched with the addition of saturated NH4Cl and water. The mixture was extracted with ethyl acetate. The combined organic extracts were washed with 2 M HCl, saturated NaHCO3, and brine, dried, filtered and evaporated to afford 8.4 g of the title compound as a mixture of diastereomers. The product was used in the next step as such. LC-MS: m/z=383.21 (M+1)+.
Sodium hydride (0.80 g, 20.0 mmol; 60% dispersion in mineral oil) was washed with pentane under N2. Dry DMF (15 ml) was added and the suspension was cooled to 0-5° C. A solution of the compound of Example 132(c) (4.5 g, 11.75 mmol) in dry DMF (40 ml) was subsequently added and the mixture was stirred at 0-5° C. for 30 min. Then, iodoethane (2.0 ml, 25.01 mmol) was added and the mixture was allowed to warm to RT and stirred overnight. The mixture was diluted with water and saturated aqueous NaHCO3 and extracted with TBME. The combined organic extracts were washed with water and brine, dried, filtered and evaporated to afford 4.9 g of the title compound as a mixture of diastereomers. The product was used as such in the next step. LC-MS: m/z=411.24 (M+1)+.
Thionyl chloride (5.15 g, 136 mmol) was added stepwise to a cooled mixture of the compound of Example 132(d) (4.4 g, 9.63 mmol) and methanol (50 ml). After 3.5 h stirring at RT the reaction was concentrated. Water and ethyl acetate were added and the pH was adjusted to 10 with 2 M NaOH. The organic phase was washed with water and brine, dried, filtered and evaporated to afford 2.77 g of the title compound as a mixture of diastereomers. The product was used as such in the next step. LC-MS: m/z=297.32 (M+1)+.
A solution of the compound of Example 132(e) (2.77 g, 9.34 mmol) in dry DCM (40 ml) was treated with Dess-Martin periodinane (25.0 ml, 12.04 mmol; 15 w-% solution in DCM). After stirring for 3 h at RT the mixture was treated with a 1:1 mixture of saturated NaHCO3 and Na2S2O3 (80 ml). After stirring the mixture for 15 min the phases were separated. The aqueous phase was extracted with DCM. The combined organic extracts were washed with 1 M HCl, saturated NaHCO3, and brine, dried, filtered and evaporated. Purification by flash chromatography gave 2.12 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.69 (1H, m), 1.88 (1H, m), 2.08 (1H, m), 2.16 (1H, m), 2.31 (1H, m), 2.54 (3H, m), 3.38 (2H, m), 3.90 (1H, m), 6.34 (1H, dd), 6.53 (1H, d).
A solution of 3-bromopyridine (0.29 ml, 3.01 mmol) in dry THF (12 ml) was cooled to −78° C. n-Butyllithium (2.0 ml, 3.20 mmol; 1.6 M solution in hexane) was added and the mixture was stirred at −78° C. for 30 min. A solution of the compound of Example 132(f) (0.59 g, 2.00 mmol) in dry THF (8 ml) was added and the mixture was allowed to warm to RT overnight. The reaction was quenched with saturated NH4Cl and then most of the solvents were evaporated. The residue was diluted with water and extracted with ethyl acetate. The combined organic extracts were washed with brine, dried, filtered and evaporated. Purification by flash chromatography gave 0.19 g of the title compound as a mixture of diastereomers. m/z=374.37 (M+1)+.
The compound of Example 132(g) (0.19 g, 0.508) was treated stepwise with concentrated sulfuric acid (2.5 ml, 46.6 mmol). The mixture was stirred at 0-5° C. for 30 min and then at RT until reaction was complete. The mixture was poured into ice water, made alkaline with 25% NaOH and extracted with ethyl acetate. The combined organic extracts were washed with brine, dried, filtered and evaporated. Purification by flash chromatography gave 0.10 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.27 (3H, t), 1.89 (1H, m), 2.00 (1H, m), 2.49 (2H, m), 2.58 (2H, m), 3.41 (2H, m), 4.03 (1H, m), 6.19 (1H, m), 6.39 (1H, dd), 6.59 (1H, d), 7.25 (1H dd), 7.63 (1H, dt), 8.50 (1H, dd), 8.64 (1H, d).
A mixture of 1,3-cyclopentanedione (2.452 g, 25 mmol), 4-amino-2-chlorobenzonitrile (3.81 g, 25 mmol) and TsOH (0.476 g, 2.5 mmol) in toluene (75 ml) was refluxed in a Dean-Stark apparatus until no more water separated. The mixture was cooled to RT and the solid product was collected by suction and recrystallized from aqueous ethanol. Yield 4.36 g. 1H NMR (400 MHz, MeOH-d4): 2.46 (2H, m), 2.88 (2H, m), 5.73 (1H, s), 7.32 (1H, dd), 7.41 (1H, d), 7.78 (1H, d).
The compound was prepared as in Example 132(d) from the compound of Example 133(a), sodium hydride (0.851 g, 21.28 mmol; 60% dispersion in mineral oil) and iodoethane (2.3 ml, 28.8 mmol). Extraction with EtOAc. Purification by flash chromatography afforded 3.70 g of the title compound. 1H NMR (400 MHz, MeOH-d4): 1.21 (3H, t), 2.42 (2H, m), 2.68 (2H, m), 3.82 (2H, q), 5.13 (1H, s), 7.49 (1H, dd), 7.73 (1H, d), 7.93 (1H, d).
Sodium borohydride (0.60 g, 15.86 mmol) was added stepwise to a mixture of the compound of Example 133(b) (1.30 g, 4.99 mmol) and ethanol (25 ml). After stirring for 2 h a second batch of sodium borohydride (0.60 g, 15.86 mmol) was added and stirring continued for 48 h. The reaction was quenched with the addition of water and extracted with ethyl acetate. The combined organic extracts were washed with brine, dried, filtered and evaporated. Purification by flash chromatography gave 0.85 g of the title compound as a mixture of diastereomers. LC-MS: m/z=265.15 (M+1)+.
The compound was prepared as in Example 132(f) from the compound of Example 133(c) (1.20 g, 4.53 mmol), pyridine (1.0 ml, 12.36 mmol) and Dess-Martin periodinane (13.0 ml, 6.26 mmol; 15 w-% solution in DCM). Purification by flash chromatography afforded 0.842 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 2.05 (1H, m), 2.26-2.42 (3H, m), 2.51 (1H, m), 2.63 (1H, m), 3.39 (2H, m), 4.42 (1H, m), 6.65 (1H, dd), 6.78 (1H, d), 7.45 (1H, d).
A mixture of 4-iodo-1-tritylimidazole (0.863 g, 1.979 mmol) in dry DCM (8 ml) was treated with EtMgBr (0.8 ml, 2.40 mmol; 3 M in ether). After stirring the mixture for 2 h at RT the compound of Example 133(d) (0.40 g, 1.522 mmol) in dry DCM (4 ml) was added and stirring was continued at RT. The reaction was quenched with addition of a mixture of saturated NH4Cl and water. The phases were separated and the aqueous phase was extracted with DCM. Combined organic extracts were washed with brine, dried, filtered and evaporated. Purification by flash chromatography gave 0.742 g of a mixture containing 75% of 2-chloro-4-(ethyl(3-hydroxy-3-(1-trityl-1H-imidazol-4-yl)cyclopentyl)amino)-benzonitrile and 25% of 1-trityl-1H-imidazole as analyzed by LC-MS. The mixture was used as such in the next step.
A solution of the compound of Example 133(e) (0.20 g, 0.329 mmol, purity 75% by LC-MS) in dry DCM (1 ml) was treated with trifluoroacetic acid (1.0 ml, 13.46 mmol). After stirring for 3 h at RT the mixture was cooled in an ice bath and treated with concentrated sulfuric acid (1 ml, 18.66 mmol). The mixture was stirred at RT for 2.5 h and then poured into ice water. The mixture was basified with 25% NaOH and extracted with ethyl acetate (2×). The combined organic extracts were washed with brine, dried, filtered and evaporated. Purification by flash chromatography gave 14 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.21 (3H, t), 2.65 (1H, m), 2.75 (1H, m), 2.92 (1H, m), 3.01 (1H, m), 3.41 (2H, q), 4.66 (1H, m), 6.18 (1H, m), 6.59 (1H, dd), 6.74 (1H, d), 6.98 (1H s), 7.40 (1H, d), 7.66 (1H, s), 9.17 (1H, br s).
The compound of Example 132 (73 mg, 0.205 mmol) was dissolved in ethyl acetate (5 ml) and hydrogenated in a H-Cube continuous-flow hydrogenation apparatus (ThalesNano Inc.) using 20% Pd(OH)2/C catalyst cartridge. The reduction was conducted at 30° C. using 1 bar hydrogen pressure with a flow rate of 1 ml/min. After three reduction cycles the solvents were evaporated to afford 37 mg of the title compound as a mixture of diastereomers (ratio 69:31 by NMR). 1H NMR (400 MHz, CDCl3) of the major isomer: 1.21 (3H, t), 1.55-2.05 (7H, m), 2.21 (1H, m), 2.34 (1H, m), 3.37 (2H, m), 3.52 (1H, m), 6.09 (1H, dd), 6.26 (1H, d), 7.35 (1H, dd), 7.69 (1H, d), 8.54 (1H, m), 8.67 (1H, d). LC-MS: m/z=358.20 (M+1)+.
A mixture of 4-iodo-N,N-dimethyl-1H-imidazole-1-sulfonamide (0.783 g, 2.60 mmol; prepared as in Heterocycles, 2000, 53, 729) in dry DCM-THF (7 ml:0.5 ml) was treated with EtMgBr (1.0 ml, 3.00 mmol; 3 M in ether). After stirring the mixture for 2 h at RT a solution of 2-chloro-4-(ethyl(3-oxocyclohexyl)amino)-6-fluorobenzonitrile (0.59 g, 2.00 mmol) in dry DCM (7 ml) was added and stirring was continued at RT until the reaction was complete (monitored by LC-MS and TLC). The reaction was quenched with addition of a mixture of saturated NH4Cl and water. The aqueous phase was extracted with DCM. The combined organic extracts were washed brine, dried, filtered and evaporated. Purification by flash chromatography gave 0.482 g of the title compound as a mixture of diastereomers. LC-MS: m/z=470.43 (M+1)+.
A solution of the compound of Example 135(a) (0.161 g, 0.343 mmol) in dioxane (0.5 ml) was treated with concentrated HCl (1.0 ml, 12.18 mmol). After stirring for 3.5 h at 90° C. the mixture was cooled to RT. The mixture was diluted with water, basified with 10% NaOH and extracted with ethyl acetate. The combined organic extracts were washed with brine, dried, filtered and evaporated. Purification by preparative HPLC gave 3 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 1.80-2.10 (3H, m), 2.46 (3H, m), 2.60 (1H, m), 3.39 (2H, m), 4.00 (1H, m), 6.38 (1H, dd), 6.58 (1H, d), 6.94 (1H, s), 7.62 (1H, d), 9.00 (1H, br s).
The compound was prepared as in Example 135(a) from 3-ethoxycyclopenten-2-one (0.14 g, 1.11 mmol). Purification by flash chromatography gave 52 mg of the title compound. 1H NMR (400 MHz, CDCl3): 2.56 (2H, m), 2.93 (6H, s), 2.97 (2H, m), 6.62 (1H, t), 7.56 (1H, d), 7.96 (1H, d).
The compound of Example 136(a) (62 mg, 0.243 mmol) was dissolved in ethyl acetate-acetic acid (8 ml:2 ml) and hydrogenated in a H-Cube continuous-flow hydrogenation apparatus (ThalesNano Inc.) using 20% Pd(OH)2/C catalyst cartridge. The reduction was conducted at 60° C. using 60 bar hydrogen pressure with a flow rate of 1 ml/min. After starting material was consumed solvents were evaporated. Yield 65 mg. 1H NMR (400 MHz, CDCl3): 2.11 (1H, m), 2.29 (1H, m), 2.42 (3H, m), 2.62 (1H, m), 2.87 (1H, m), 2.88 (6H, s), 7.01 (1H, m), 7.85 (1H, d).
A solution of the compound of Example 136(b) (0.114 g, 0.443 mmol), 4-amino-2-(trifluoromethyl)benzonitrile (0.091 g, 0.487 mmol), and acetic acid (0.051 ml, 0.886 mmol) in 1,2-dichloroethane was stirred at RT for 1 h. Sodium triacetoxyborohydride (0.188 g, 0.886 mmol) was added and stirring was continued for 72 h. The reaction was quenched with cold water and extracted with DCM. Combined organic extracts were washed with brine, dried, filtered and evaporated. Purification by flash chromatography gave 53 mg of the title compound as a mixture of diastereomers. LC-MS: m/z=428.48 (M+1)+.
Sodium hydride (8.0 mg, 0.20 mmol; 60% dispersion in mineral oil) was added to a cooled solution of the compound of Example 136(c) (53 mg, 0.124 mmol) in dry DMF (1 ml). The mixture was stirred at 0-5° C. for 30 min. Then, iodoethane (22 μl, 0.275 mmol) was added and the mixture was allowed to warm to RT and stirred until the reaction was complete. The reaction was quenched with a mixture of water and saturated aqueous NaHCO3 and extracted with TBME. Combined organic extracts were washed with water and brine, dried, filtered and evaporated to afford 54 mg of the title compound as a mixture of diastereomers. LC-MS: m/z=456.55 (M+1)+. Product was used as such in the next step.
The compound was prepared as in Example 135(b) starting from the compound of Example 136(d) (52 mg, 0.114 mmol). Purification by preparative HPLC gave 14.5 mg of the title compound as a mixture of diastereomers (ratio 82:18 by NMR). 1H NMR (400 MHz, CDCl3) of the main diastereomer: 1.22 (3H, t), 1.90 (3H, m), 2.15 (2H, m), 2.38 (1H, m), 3.20 (1H, m), 3.43 (2H, q), 4.28 (1H, m), 6.83 (2H, m), 6.99 (1H, d), 7.56 (1H, d), 7.64 (1H, br s).
A mixture of (R)-tert-butyl piperidin-3-ylcarbamate (0.20 g, 1.00 mmol), 3-bromopyridine (0.12 ml, 1.246 mmol), Pd2(dba)3 (46 mg, 0.05 mmol), rac-BINAP (62 mg, 0.10 mmol), and sodium tert-butoxide (0.135 g, 1.40 mmol) in dry toluene (5 ml) was stirred at 80° C. After the reaction was completed the mixture was diluted with TBME and filtered. The filtrate was concentrated and the crude product was purified by flash chromatography. Yield 0.134 g. 1H NMR (400 MHz, CDCl3): 1.46 (9H, s), 1.54 (1H, m), 1.72 (1H, m), 1.84 (2H, m), 2.95 (1H, m), 3.10 (1H, m), 3.20 (1H, m), 3.45 (1H, m), 3.85 (1H, br s), 4.90 (1H, br s), 7.14 (1H, dd), 7.21 (1H, m), 8.09 (1H, dd), 8.30 (1H, d).
Thionyl chloride (0.30 ml, 4.11 mmol) was added stepwise to a cooled mixture of the compound of Example 137(a) (0.134 g, 0.483 mmol) and methanol (2.5 ml). The mixture was stirred at RT until all the starting material had reacted. The mixture was concentrated to afford 0.128 g of the title compound. The product was used as such in the next step. 1H NMR (400 MHz, DMSO-d6): 1.55-1.72 (2H, m), 1.83 (1H, m), 1.99 (1H, m), 3.19 (1H, m), 3.33 (2H, m), 3.64 (1H, m), 3.88 (1H, m), 7.80 (1H, dd), 8.01 (1H, dd), 8.18 (1H, d), 8.34 (3H, br s), 8.47 (1H, d).
A mixture of the compound of Example 137(b) (0.128 g, 0.599 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.10 g, 0.529 mmol) and DIPEA (0.40 ml, 2.296 mmol) in dry DMSO (5 ml) was stirred at 100° C. After the reaction was completed the reaction mixture was diluted with water and extracted with TBME. The combined organic extracts were washed with water and brine, dried, filtered and evaporated. Purification by flash chromatography gave 55 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.77 (2H, m), 1.90 (2H, m), 3.15 (2H, m), 3.23 (1H, m), 3.42 (1H, dd), 3.80 (1H, m), 5.00 (1H, d), 6.74 (1H, dd), 6.90 (1H, d), 7.20 (2H, m), 7.56 (1H, d), 8.16 (1H, dd), 8.33 (1H, dd).
Sodium hydride (10 mg, 0.250 mmol; 60% dispersion in mineral oil) was weighed in a dry flask under N2. Dry DMF (1.5 ml) was added and the suspension was cooled to 0-5° C. The compound of Example 137(c) (50 mg, 0.144 mmol) in dry DMF (2.0 ml) was added and the mixture was stirred at 0-5° C. for 30 min. Then, iodoethane (25 μl, 0.318 mmol) was added and the mixture was allowed to warm to RT and stirred until the reaction was complete. Then the mixture was diluted with a mixture of water and saturated aqueous NaHCO3 and extracted with TBME. The combined organic extracts were washed with water and brine, dried, filtered and evaporated. Crude product was purified by preparative HPLC. Yield 22 mg. 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.76 (1H, m), 1.88 (1H, m), 2.00 (1H, m), 2.07 (1H, m), 2.74 (1H, dt), 2.79 (1H, t), 3.47 (2H, m), 3.68 (2H, m), 3.98 (1H, m), 6.87 (1H, dd), 7.02 (1H, d), 7.18 (2H, m), 7.60 (1H, d), 8.13 (1H, dd), 8.31 (1H, m).
The compound was prepared as in Example 137(c) starting from (S)-tert-butyl 3-aminopyrrolidine-1-carboxylate (0.745 g, 4.00 mmol), 4-fluoro-2-(trifluoromethyl)-benzonitrile (0.756 g, 4.00 mmol) and DIPEA (2.0 ml, 11.48 mmol) in dry DMSO (10 ml). Purification by flash chromatography gave 0.872 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.47 (9H, s), 1.94 (1H, m), 2.24 (1H, m), 3.30 (1H, m), 3.50 (1H, m), 3.71 (1H, m), 4.09 (1H, m), 4.68 (1H, d), 6.71 (1H, dd), 6.88 (1H, d), 7.58 (1H, d).
The compound was prepared as in Example 132(d) from the compound of Example 138(a) (0.872 g, 2.452 mmol). Extraction with EtOAc. Yield 0.89 g. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.48 (9H, s), 2.07 (1H, m), 2.20 (1H, m), 3.27 (1H, m), 3.41 (3H, m), 3.64 (2H, m), 4.39 (1H, br s), 6.86 (1H, dd), 7.01 (1H, d), 7.60 (1H, d).
The compound was prepared as in Example 137(b) from the compound of Example 138(b) (0.89 g, 2.327 mmol) and thionyl chloride (4 equivalents) in methanol (10 ml). Yield 0.349 g. 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 2.12 (1H, m), 2.33 (1H, m), 3.10 (1H, dd), 3.31 81H, m), 3.45-3.57 (4H, m), 4.59 (1H, m), 6.91 (1H, dd), 7.05 (1H, d), 7.63 (1H, d).
The compound was prepared as in Example 137(a) starting from the compound of Example 138(c) (0.156 g, 0.489 mmol). Purification by flash chromatography afforded 0.123 g of the title compound 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 2.28 (1H, m), 2.41 (1H, m), 3.38 (1H, m), 3.48 (2H, m), 3.61 (2H, m), 4.62 (1H, m), 6.87 (1H, ddd), 6.91 (1H, dd), 7.06 (1H, d), 7.15 (1H, dd), 7.60 (1H, d), 8.03 (2H, m).
The compound was prepared as in Example 138(a) starting from (S)-tert-butyl 3-aminopiperidine-1-carboxylate (0.801 g, 4.00 mmol). Purification by flash chromatography gave 1.08 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.44 (9H, s), 1.62 (2H, m), 1.75 (1H, m), 1.98 (1H, m), 3.13 (1H, dd), 3.26 (1H, m), 3.50 (1H, m), 3.58 (1H, m), 3.84 (1H, dd), 4.52 (1H, br s), 6.73 (1H, dd), 6.86 (1H, d), 7.57 (1H, d).
The compound was prepared as in Example 132(d) starting from the compound of Example 139(a) (1.08 g, 2.92 mmol). Yield 0.958 g. The compound was used as such in the next step. 1H NMR (400 MHz, CDCl3): 1.20 (3H, t), 1.47 (9H, s), 1.64 (1H, m), 1.85 (1H, m), 1.92 (1H, m), 2.03 (1H, m), 2.78 (2H, m), 3.51 (2H, m), 3.76 (1H, m), 4.07 (2H, d), 7.08 (1H, dd), 7.13 (br s), 7.69 (1H, d).
The compound was prepared as in Example 137(b) starting from the compound of Example 139(b) (0.958 g) and using 4 molar equivalent of thionyl chloride. Crude product was purified by trituration with ether. Yield 0.805 g. 1H NMR (400 MHz, DMSO-d6): 1.10 (3H, t), 1.79-1.97 (4H, m), 2.83 (1H, m), 3.01 (1H, m), 3.12 (1H, m), 3.29 (1H, m), 3.47 (2H, m), 4.27 (1H, m), 7.16 (2H, m), 7.85 (1H, d), 8.95 (1H, br s), 9.10 (1H, br s).
A mixture of the compound of Example 139(c) (83 mg, 0.25 mmol), 3-bromopyridine (26 μl, 0.275 mmol), DIPEA (45 μl, 0.258 mmol) and dry toluene (2.5 ml) was stirred at RT for 15 min. Then Pd2(dba)3 (11 mg, 0.013 mmol), rac-BINAP (16 mg, 0.025 mmol), and sodium tert-butoxide (34 mg, 0.35 mmol) were added and stirring was continued at 80° C. After the reaction was completed the mixture was diluted with TBME and filtered. The filtrate was concentrated and the crude product was purified by flash chromatography. Yield 59 mg. 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.77 (1H, dq), 1.89 (1H, m), 2.01 (1H, m), 2.08 (1H, m), 2.75 (1H, dt), 2.79 (1H, t), 3.48 (2H, m), 3.68 (2H, m), 3.98 (1H, m), 6.87 (1H, dd), 7.02 (1H, d), 7.18 (2H, m), 7.60 (1H, d), 8.13 (1H, dd), 8.31 (1H, d).
The compound was prepared as in Example 139(d) from the compound of Example 139(c) and 3-bromo-5-methoxypyridine. Yield 59 mg. 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.72-1.93 (2H, m), 2.00 (1H, m), 2.07 (1H, m), 2.75 (1H, dt), 2.79 (1H, t), 3.47 (2H, m), 3.67 (2H, m), 3.84 (3H, s), 3.97 (1H, m), 6.69 (1H, m), 6.87 (1H, dd), 7.02 (1H, d), 7.60 (1H, d), 7.85 (1H, d), 7.95 (1H, d).
The compound was prepared as in Example 139(d) from the compound of Example 139(c) and 5-bromo-2-methoxypyridine. Yield 21 mg. 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.70 (1H, dq), 1.88 (1H, m), 2.02 (2H, m), 2.64 (1H, dt), 2.68 (1H, t), 3.45 (4H, m), 3.89 (3H, s), 4.01 (1H, m), 6.68 (1H, d), 6.87 (1H, dd), 7.01 (1H, d), 7.27 (1H, dd), 7.59 (1H, d), 7.80 (1H, d).
The compound was prepared as in Example 139(d) from the compound of Example 139(c) and 5-bromopyridine-3-carbonitrile. Yield 19 mg. 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 1.84 (2H, m), 2.10 (2H, m), 2.81 (1H, dt), 2.86 (1H, t), 3.48 (2H, m), 3.72 (2H, m), 3.97 (1H, m), 6.87 (1H, dd), 7.01 (1H, d), 7.33 (1H, m), 7.62 (1H, d), 8.33 (1H, d), 8.48 (1H, d).
The compound was prepared as in Example 137(a) from (R)-tert-butyl pyrrolidin-3-ylcarbamate (0.466 g, 2.50 mmol) and 3-bromopyridine (0.241 ml, 2.50 mmol). Purification by flash chromatography gave 0.263 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.46 (9H, s), 1.97 (1H, m), 2.30 (1H, m), 3.18 (1H, dd), 3.35 (1H, m), 3.45 (1H, m), 3.58 (1H, dd), 4.38 (1H, br s), 4.71 (1H, br s), 6.81 (1H, dd), 7.12 (1H, dd), 7.98 (2H, m).
The compound was prepared as in Example 137(b) from the compound of Example 143(a) (0.263 g, 0.999 mmol). The crude product was purified by trituration with ether. Yield 0.217. 1H NMR (400 MHz, DMSO-d6): 2.21 (1H, m), 2.34 (1H, m), 3.46 (2H, m), 3.60 (1H, m), 3.67 (1H, m), 3.99 (1H, br s), 7.65 (1H, dd), 7.78 (1H, dd), 8.10 (1H, d), 8.13 (1H, d), 8.51 (3H, br s).
The compound was prepared as in Example 137(c) from the compound of Example 143(b) (0.217 g, 1.087 mmol). Purification by flash chromatography gave 0.166 g of the title compound. 1H NMR (400 MHz, CDCl3): 2.13 (1H, m), 2.43 (1H, m), 3.31 (dd), 3.44 (1H, m), 3.54 (1H, m), 3.71 (1H, dd), 4.31 (1H, m), 4.80 (1H, d), 6.75 (1H, dd), 6.84 (1H, ddd), 6.91 (1H, d), 7.14 (1H, dd), 7.61 (1H, d), 8.01 (2H, d).
The compound was prepared as in Example 137(b) from the compound of Example 143(c) (0.166 g, 0.50 mmol). Purification by flash chromatography gave 0.123 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 2.27 (1H, m), 2.41 (1H, m), 3.39 (2H, m), 3.48 (2H, m), 3.62 (2H, m), 4.61 (1H, m), 6.89 (2H, m), 7.05 (1H, d), 7.16 (1H, dd), 7.62 (1H, d), 8.04 (2H, m).
The compound was prepared as in Example 139(d) from the compound of Example 139(c) and 3-bromo-5-fluoropyridine. Yield 17.8 mg. 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 1.83 (2H, m), 2.02 (1H, m), 2.09 (1H, m), 2.78 (1H, dt), 2.83 (1H, t), 3.47 (2H, m), 3.70 (2H, m), 3.96 (1H, m), 6.87 (2H, m), 7.01 (1H, d), 7.62 (1H, d), 7.98 (1H, br s), 8.12 (1H, br s).
The compound was prepared as in Example 139(d) from the compound of Example 139(c) and 3-bromo-5-(trifluoromethyl)pyridine. Yield 48.6 mg. 1H NMR (400 MHz, CDCl3): 1.27 (3H, t), 1.85 (2H, m), 2.03-2.13 (2H, m), 2.82 (1H, dt), 2.86 (1H, t), 3.49 (2H, m), 3.71 (1H, m), 3.77 (1H, m), 3.98 (1H, m), 6.88 (1H, dd), 7.02 (1H, d), 7.31 (1H, m), 7.61 (1H, d), 8.36 (1H, m), 8.46 (1H, d).
The compound was prepared as in Example 138(a) from (R)-tert-butyl 3-aminopiperidine-1-carboxylate (1.602 g, 8.00 mmol). Purification by flash chromatography gave 1.853 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.44 (9H, s), 1.62 (2H, m), 1.75 (1H, m), 1.98 (1H, m), 3.13 (1H, dd), 3.26 (1H, m), 3.50 (1H, m), 3.58 (1H, m), 3.84 (1H, d), 4.52 (1H, br s), 6.73 (1H, dd), 6.86 (1H, br s), 7.57 (1H, d).
The compound was prepared as in Example 132(d) from the compound of Example 146(a) (1.853 g, 5.02 mmol). The crude product (1.97 g) was used as such in the next step. 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.48 (9H, s), 1.64 (1H, m), 1.75 (1H, m), 1.85 (1H, m), 2.04 (1H, m), 2.68 (2H, m), 3.42 (2H, m), 3.65 (1H, m), 4.15 (2H, br s), 6.88 (1H, dd), 7.01 (1H, d), 7.60 (1H, d).
The compound was prepared as in Example 137(b) starting from the compound of Example 146(b) (1.97 g) and using 4.3 molar equivalent of thionyl chloride. Crude product was purified by trituration with ether. Yield 1.23 g. 1H NMR (400 MHz, DMSO-d6): 1.11 (3H, t), 1.90 (4H, m), 2.84 (1H, m), 3.01 (1H, m), 3.09 (1H, m), 3.27 (2H, m), 3.48 (2H, m), 4.34 (1H, m), 7.18 (2H, m), 7.84 (1H, d), 9.27 (2H, br s).
The compound was prepared as in Example 139(d) from the compound of Example 146(c) and 3-bromo-5-(2,2,2-trifluoroethoxy)pyridine (WO 2012/152983). Yield 24 mg. 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.79 (1H, m), 1.87 (1H, m), 2.01 (1H, m), 2.09 (1H, m), 2.77 (1H, dt), 2.81 (1H, t), 3.47 (2H, m), 3.67 (1H, m), 3.72 (1H, m), 3.96 (1H, m), 4.39 (2H, q), 6.76 (1H, t), 6.87 (1H, dd), 7.01 (1H, d), 7.61 (1H, d), 7.84 (1H, d), 8.05 (1H, d).
The compound was prepared as in Example 139(d) from the compound of Example 146(c) and 3-bromo-5-methylpyridine. Yield 48 mg. 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.76 (1H, m), 1.87 (1H, m), 2.00 (1H, m), 2.07 (1H, m), 2.29 (3H, s), 2.72 (1H, dt), 2.76 (1H, t), 3.47 (2H, m), 3.66 (2H, m), 3.97 (1H, m), 6.87 (1H, dd), 7.01 (2H, m), 7.60 (1H, d), 7.98 (1H, d), 8.12 (1H, d).
The compound was prepared as in Example 139(d) from the compound of Example 146(c) and 3-bromo-4-methylpyridine. Yield 57 mg. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.75 (1H, dt), 1.88 (1H, m), 2.00 (1H, m), 2.08 (1H, m), 2.35 (3H, s), 2.75 (1H, t), 2.79 (1H, dt), 3.17 (2H, m), 3.47 (2H, m), 4.03 (1H, m), 6.86 (1H, dd), 7.04 (1H, d), 7.09 (1H, d), 7.59 (1H, d), 8.21 (1H, d), 8.27 (1H, s).
A mixture of the compound of Example 146(c) (83 mg, 0.25 mmol), 2-chloropyrazine (25 μl, 0.275 mmol) and DIPEA (0.10 ml, 0.575 mmol) in dry DMSO (1.5 ml) was first heated for 1 h at 130° C. and then 2 h at 190° C. using a microwave reactor. The mixture was diluted with water and extracted with TBME. The combined organic extracts were washed with water and brine, dried, filtered and evaporated. Crude product was purified by flash chromatography. Yield 26 mg. 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 1.74 (1H, m), 1.94 (2H, m), 2.11 (1H, m), 2.83 (1H, t), 3.00 (1H, dt), 3.49 (2H, m), 3.82 (1H, m), 4.20 (1H, m), 4.60 (1H, m), 6.93 (1H, dd), 7.21 (1H, d), 7.60 (1H, d), 7.88 (1H, d), 8.09 (1H, m), 8.19 (1H, s).
The compound was prepared as in Example 133(a) from 1,3-cyclopentanedione (7.36 g, 75 mmol) and 4-amino-2-(trifluoromethyl)benzonitrile (13.96 g, 75 mmol). Yield 19.32 g. 1H NMR (400 MHz, MeOH-d4): 2.47 (2H, m), 2.90 (2H, m), 5.76 (1H, t), 7.62 (1H, br s), 7.63 (1H, dd), 7.97 (1H, m).
The compound was prepared as in Example 133(b) from the compound of Example 150(a) (3.33 g, 12.5 mmol). Purification by flash chromatography gave 2.51 g of the title compound. 1H NMR (400 MHz, MeOH-d4): 1.22 (3H, t), 2.43 (2H, m), 2.69 (2H, m), 3.86 (2H, q), 5.14 (1H, s), 7.81 (1H, dd), 7.96 (1H, d), 8.12 (1H, d).
Sodium borohydride (0.777 g, 20.53 mmol) was added stepwise to a mixture of the compound of Example 150(b) (3.02 g, 10.26 mmol) and ethanol (55 ml). After stirring (2 h) at 40° C. a second batch of sodium borohydride (0.777 g, 20.53 mmol) was added and stirring continued (2 h). Then a third batch of sodium borohydride (0.777 g, 20.53 mmol) was added and stirring continued overnight at RT and at 40° C. for 8 h. The reaction was quenched with the addition of water and extracted with ethyl acetate. The combined organic extracts were washed with brine, dried, filtered and evaporated. Purification by flash chromatography gave 1.61 g of the title compound as a mixture of diastereomers. LC-MS: m/z=299.23 (M+1)+.
The compound was prepared as in Example 133(d) from the compound of Example 150(c) (1.79 g, 6.00 ml). Purification by flash chromatography gave 0.826 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 2.08 (1H, m), 2.28-2.44 (3H, m), 2.53 (1H, m), 2.65 (1H, dd), 3.44 (2H, m), 4.48 (1H, m), 6.88 (1H, dd), 7.02 (1H, d), 7.62 (1H, d).
The compound was prepared as in Example 133(e) from the compound of Example 150(d) (0.826 g, 2.79 mmol. Purification by flash chromatography gave 0.742 g of the title compound as a mixture of diastereomers. LC-MS: m/z=607.42 (M+1)+.
The compound was prepared as in Example 133(f) from the compound of Example 150(d) (0.742 g, 1.223 mmol). Purification by flash chromatography gave 87 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 2.65 (1H, m), 2.77 (1H, m), 2.94 (1H, m), 3.06 (1H, m), 3.47 (2H, q), 4.70 (1H, m), 6.15 (1H, br s), 6.80 (1H, dd), 7.55 (1H, d), 7.66 (1H, s). LC-MS: m/z=347.03 (M+1)+.
The compound was prepared as in Example 139(d) from the compound of Example 146(c) and 3-bromo-4-fluoropyridine. Yield 33 mg. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.79 (1H, m), 1.93 (1H, m), 2.03 (1H, m), 2.11 (1H, m), 2.72 (1H, t), 2.83 (1H, dt), 3.39-3.55 (4H, m), 4.04 (1H, m), 6.90 (1H, dd), 7.00 (1H, dd), 7.06 (1H, d), 7.61 (1H, d), 8.24 (1H, dd), 8.27 (1H, d).
The compound was prepared as in Example 139(d) from the compound of Example 146(c) and 5-bromopyrimidine. Yield 42 mg. 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 1.80 (1H, m), 1.89 (1H, m), 2.08 (2H, m), 2.79 (1H, dt), 2.83 (1H, t), 3.48 (2H, q), 3.71 (2H, m), 3.99 (1H, m), 6.87 (1H, dd), 7.02 (1H, dd), 7.62 (1H, d), 8.38 (2H, s), 8.73 (1H, s).
The compound was prepared as in Example 138(d) from the compound of Example 138(c) and 3-bromo-5-methylpyridine. Yield 47 mg. 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 2.26 (1H, m), 2.30 (3H, s), 2.40 (1H, m), 3.37 (2H, m), 3.47 (2H, m), 3.60 (2H, m), 4.60 (1H, m), 6.68 (1H, m), 6.90 (1H, dd), 7.05 (1H, d), 7.61 (1H, d), 7.85 (1H, d), 7.88 (1H, s).
The compound was prepared as in Example 138(d) from the compound of Example 138(c) and 3-bromo-4-methylpyridine. Yield 39 mg. 1H NMR (400 MHz, CDCl3): 1.28 (3H, t), 2.16 (1H, m), 2.33 (3H, s), 2.40 (1H, m), 3.29 (1H, m), 3.35-3.44 (2H, m), 3.49 (1H, dt), 3.59 (2H, m), 4.55 (1H, m), 6.93 (1H, dd), 7.05 (1H, dd), 7.08 (1H, d), 7.61 (1H, d), 8.15 (1H, d), 8.20 (1H, s).
The compound was prepared as in Example 132(d) from the compound of Example 146(a) (0.223 g, 0.604 mmol) and iodomethane (80 μl, 1.285 mmol). The crude product (0.223 g) was used as such in the next step. 1H NMR (400 MHz, CDCl3): 1.48 (9H, s), 1.63 (1H, m), 1.75 (1H, m), 1.83 (1H, m), 1.97 (1H, m), 2.66 (1H, m), 2.75 (1H, m), 2.85 (3H, s), 3.66 (1H, m), 4.13 (2H, br s), 6.90 (1H, dd), 7.03 (1H, d), 7.61 (1H, d).
The compound was prepared as in Example 137(b) from the compound of Example 155(a) (0.223 g) and using 3.93 molar equivalent of thionyl chloride. Crude product was purified by trituration with ether. Yield 0.109 g. 1H NMR (400 MHz, DMSO-d6): 1.87 (4H, m), 2.81 (1H, m), 2.92 (3H, s), 3.05 (1H, t), 3.12 (1H, m), 3.28 (1H, m), 4.32 (1H, m), 7.19 (2H, m), 7.86 (1H, d), 9.19 (2H, br s).
The compound was prepared as in Example 139(d) from the compound of Example 155(b) (54 mg, 0.17 mmol) and 3-bromo-5-methylpyridine (22 μl, 0.187 mmol). Yield 43 mg. 1H NMR (400 MHz, CDCl3): 1.78 (1H, m), 1.86 (1H, m), 1.99 (1H, m), 2.29 (3H, s), 2.73 (1H, dt), 2.84 (1H, t), 3.00 (3H, s), 3.66 (2H, m), 3.99 (1H, m), 6.90 (1H, dd), 7.00 (1H, br s), 7.03 (1H, d), 7.61 (1H, d), 7.97 (1H, s), 8.12 (1H, d).
Isopropylmagnesium bromide (13.3 ml, 13.3 mmol, 1 M in THF) was added to a solution of 3-iodopyridine (2.73 g, 13.3 mmol) in dry DCM (30 ml) under N2. The mixture was stirred at RT for 4 h. A solution of 3-methoxycyclopent-2-enone (1.121 g, 10.0 mmol) in dry THF (4.5 ml) was added stepwise and the mixture was stirred 48 h at RT under N2. The reaction was quenched with addition of water and saturated NH4Cl. The mixture was extracted with ethyl acetate. Combined organic extracts were washed with brine, dried, filtered and evaporated. Purification by flash chromatography gave 0.369 g of the title compound. 1H NMR (400 MHz, CDCl3): 2.63 (2H, m), 3.08 (2H, m), 6.65 (1H, t), 7.41 (1H, dd), 7.93 (1H, dt), 8.70 (1H, dd), 8.92 (1H, d).
Cerium chloride heptahydrate (1.143 g, 3.07 mmol) was added to a solution of the compound of Example 156(a) (0.444 g, 2.79 mmol) in methanol (12 ml). The mixture was cooled to 0-5° C. Sodium borohydride (0.127 g, 3.35 mmol) was added stepwise and the mixture was stirred. After the reaction was completed the reaction was quenched with the addition of water. Methanol was evaporated and the residue was diluted with water and saturated NH4Cl and extracted with ethyl acetate. Combined organic extracts were washed with brine, dried, filtered and evaporated to afford 0.523 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.58 (1H, m), 1.91 (1H, m), 2.50 (1H, m), 2.68 (1H, m), 2.93 (1H, m), 5.05 (1H, m), 6.31 (1H, q), 7.27 (1H, m), 7.75 (1H, m), 8.51 (1H, dd), 8.74 (1H, m).
A mixture of the compound of Example 156(b) (0.523 g, 2.79 mmol) in toluene-THF (1:1, 14 ml) was cooled to 0-5° C. and treated with diphenylphosphoryl azide (1.05 ml, 4.87 mmol) and DBU (0.80 ml, 5.31 mmol). The mixture was stirred overnight in a melting ice bath, diluted with water and toluene and filtered. The filtrate was acidified with 2 M HCl. The aqueous phase was made alkaline with 2M NaOH and extracted with ethyl acetate. The organic phase was washed with water and brine, dried, filtered and evaporated to afford 0.353 g of the title compound. 1H NMR (400 MHz, CDCl3): 2.12 (1H, m), 2.49 (1H, m), 2.75 (1H, m), 2.95 (1H, m), 4.59 (1H, m), 6.26 (1H, d), 7.29 (1H, dd), 7.76 (1H, d), 8.54 (1H, d), 8.74 (1H, d).
Polymer supported triphenylphosphine (0.358 g, 1.074 mmol; 3 mmol/g) was weighed in a flask. Methanol (5 ml) and the compound of Example 156(c) (0.10 g, 0.537 mol) dissolved in methanol (1 ml) were added. The mixture was stirred at 65° C. until the reaction completed. The cooled mixture was filtered and the solid material was washed with methanol. The filtrate was concentrated to afford 78 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.65 (1H, m), 2.50 (1H, m), 2.66 (1H, m), 2.84 (1H, m), 4.17 (1H, m), 6.22 (1H, m), 7.26 (1H, dd), 7.72 (1H, dt), 8.47 (1H, dd), 8.69 (1H, d).
The compound was prepared as in Example 137(c) from the compound of Example 156(d) (0.25 g, 1.482 g) and 4-fluoro-2-(trifluoromethyl)benzonitrile (0.28 g, 1.482 mmol). Yield 0.288 g. 1H NMR (400 MHz, CDCl3): 1.90 (1H, m), 2.63 (1H, m), 2.82 (1H, m), 2.94 (1H, m), 4.56 (1H, d), 4.80 (1H, m), 6.26 (1H, m), 6.75 (1H, dd), 6.90 (1H, d), 7.30 (1H, dd), 7.59 (1H, d), 7.75 (1H, dt), 8.55 (1H, dd), 8.74 (1H, d).
The compound was prepared as in Example 137(d) from the compound of Example 156(d) (0.278 g, 0.844 g) and iodoethane (0.15 ml, 1.874 mmol). Purification by flash chromatography gave 0.183 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.88 (1H, m), 2.65 (1H, m), 2.83 (1H, m), 2.97 (1H, m), 3.41 (2H, m), 5.15 (1H, m), 6.24 (1H, m), 6.87 (1H, dd), 7.04 (1H, d), 7.32 (1H, dd), 7.60 (1H, d), 7.77 (1H, dt), 8.56 (1H, dd), 8.77 (1H, d).
The compound was prepared as in Example 134 from the compound of Example 156 (61 mg, 0.171 mmol). The reduction was conducted at 50° C. using 1 bar hydrogen pressure with a flow rate of 1 ml/min and one reduction cycle. Purification by preparative HPLC gave 29 mg of the title compound (95% cis-diastereomer). 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 1.77-1.94 (3H, m), 2.26 (2H, m), 2.43 (1H, m), 3.18 (1H, m), 3.45 (2H, m), 4.36 (1H, m), 6.85 (1H, dd), 7.01 (1H, d), 7.26 (1H, m), 7.58 (2H, m), 8.49 (1H, dd), 8.55 (1H, d).
The compound was prepared as in Example 137(a) from (S)-tert-butyl pyrrolidin-3-ylcarbamate (0.373 g, 2.00 mmol) and 3-bromopyridine (0.212 ml, 2.20 mmol). Purification by flash chromatography gave 0.255 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.46 (9H, s), 1.97 (1H, m), 2.31 (1H, m), 3.18 (1H, dd), 3.35 (1H, m), 3.45 (1H, m), 3.58 (1H, dd), 4.38 (1H, br s), 4.71 (1H, br s), 6.81 (1H, dd), 7.12 (1H, dd), 7.98 (2H, m).
The compound was prepared as in Example 137(b) from the compound of Example 158(a) (0.255 g, 0.968 mmol). Crude product was purified by trituration with ether. Yield 0.181 g. 1H NMR (400 MHz, DMSO-d6): 2.18 (1H, m), 2.35 (1H, m), 3.38 (1H, m), 3.46 (1H, dd), 3.58 (1H, m), 3.66 (1H, dd), 4.00 (1H, br s), 7.64 (1H, dd), 7.77 (1H, dd), 8.10 (1H d), 8.14 (1H, d), 8.43 (3H, br s).
The compound was prepared as in Example 137(c) from the compound of Example 158(b) (0.181 g, 0.906 mmol) and 2-chloro-4-fluorobenzonitrile (0.155 g, 0.997 mmol). Purification by flash chromatography gave 54 mg of the title compound. 1H NMR (400 MHz, CDCl3): 2.13 (1H, m), 2.36 (1H, m), 3.27 (1H, dd), 3.39 (1H, dt), 3.47 (1H, m), 3.66 (1H, dd), 4.24 (1H, m), 5.35 (1H, d), 6.54 (1H, dd), 6.69 (1H, d), 6.76 (1H, dd), 7.08 (1H, dd), 7.40 (1H, d), 7.93 (1H, d).
The compound was prepared as in Example 137(d) from the compound of Example 158(c) (54 mg, 0.181 mmol) and iodoethane (32 μl, 0.401 mmol). Purification by preparative HPLC gave 33 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 2.25 (1H, m), 2.39 (1H, m), 3.33 (1H, dd), 3.41 (3H, m), 3.59 (2H, m), 4.56 (1H, m), 6.68 (1H, dd), 6.81 (1H, d), 6.86 (1H, dd), 7.15 (1H, dd), 7.45 (1H, d), 8.02 (2H, m).
A mixture of the compound of Example 146(c) ((0.167 g, 0.50 mmol), 2,4-dichloropyrimidine (0.10 g, 0.673 mmol) and DIPEA (0.30 ml, 1.725 mmol) in methanol (2.5 ml) was stirred at RT for 3.5 h. Methanol was evaporated and the residue was diluted with water and extracted with ethyl acetate. Organic phase was washed with water and brine, dried, filtered and evaporated. Crude product was purified by flash chromatography to afford 158 mg of (R)-4-((1-(2-chloropyrimidin-4-yl)piperidin-3-yl)(ethyl)amino)-2-(trifluoromethyl)-benzonitrile, 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 1.67 (1H, m), 1.89-2.03 (2H, m), 2.15 (1H, m), 2.85 (1H, m), 2.98, 1H, m), 3.48 (2H, m), 3.72 (1H, m), 4.23 (1H, br s), 4.65 (1H, br s), 6.44 (1H, dd), 7.01 (1H, d), 7.12 (1H, dd), 7.67 (1H, d), 8.09 (1H, d), and 70 mg of (R)-4-((1-(4-chloropyrimidin-2-yl)piperidin-3-yl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile, 1H NMR (400 MHz, CDCl3): 1.27 (3H, t), 1.66 (1H, m), 1.93 (2H, m), 2.11 (1H, m), 2.85 (2H, m), 3.48 (2H, m), 3.68 (1H, m), 4.83 (2H, m), 6.56 (1H, d), 7.01 (1H, d), 7.11 (1H, br s), 7.62 (1H, d), 8.19 (1H, d).
The compound was prepared as in Example 139(d) from the compound of Example 146(c) and 4-bromo-3-fluoropyridine. Yield 51 mg. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.86 (2H, m), 2.02 (1H, m), 2.12 (1H, m), 2.79 (2H, m), 3.46 (2H, m), 3.67 (1H, m), 3.77 (1H, m), 3.99 (1H, m), 6.75 (1H, dd), 6.89 (1H, dd), 7.05 (1H, d), 7.61 (1H, d), 8.18 (1H, d), 8.25 (1H, d).
The compound was prepared as in Example 138(d) from the compound of Example 138(c) and 3-bromo-4-methylpyridine. Purification by preparative HPLC gave 35 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 2.26 (1H, m), 2.40 (1H, m), 3.38 (2H, m), 3.47 (2H, m), 3.60 (2H, m), 4.61 (1H, m), 6.38 (1H, t), 6.90 (1H, dd), 7.05 (1H, d), 7.62 (1H, d), 7.69 (1H, d), 7.77 (1H, d).
(R)-4-((1-(2-Chloropyrimidin-4-yl)piperidin-3-yl)(ethyl)amino)-2-(trifluoromethyl)-benzonitrile (Example 159) (77 mg, 0.188 mmol) was dissolved in MeOH-ethyl acetate (2:1, 4 ml) and hydrogenated in a H-Cube continuous-flow hydrogenation apparatus (ThalesNano Inc.) using 10% Pd/C catalyst cartridge. The reduction was conducted at 60° C. using 1 bar hydrogen pressure with a flow rate of 1 ml/min. The solvents were evaporated and the crude product was purified by preparative HPLC to afford 42 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 1.69 (1H, m), 1.96 (2H, m), 2.13 (1H, m), 2.83 (1H, t), 2.96 (1H, m), 3.49 (2H, m), 3.72 (1H, m), 4.23 (1H, d), 4.75 (1H, d), 6.55 (1H, d), 6.94 (1H, dd), 7.16 (1H, d), 7.61 (1H, d), 8.24 (1H, dd), 8.63 (1H, s).
The compound was prepared as in Example 138(d) from the compound of Example 138(c) and 4-bromo-3-fluoropyridine. Purification by preparative HPLC afforded 29 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.27 (3H, t), 2.23 (1H, m), 2.36 (1H, m), 3.48 (2H, m), 3.57 (2H, m), 3.82 (2H, m), 4.55 (1H, m), 6.48 (1H, dd), 6.90 (1H, dd), 7.05 (1H, d), 7.62 (1H, d), 8.09 (1H, d), 8.18 (1H, d).
The compound was prepared as in Example 138(d) from the compound of Example 138(c) and 4-bromo-3-fluoropyridine. Yield 35 mg. 1H NMR (400 MHz, CDCl3): 1.28 (3H, t), 2.08 (1H, m), 2.39 (1H, m), 3.33 (2H, dd), 3.55 (2H, m), 3.61 (1H, m), 3.70 (1H, dd), 3.89 (3H, s), 4.51 (1H, m), 6.77 (1H, d), 6.92 (1H, dd), 7.10 (1H, d), 7.60 (1H, d), 8.00 (1H, s), 8.15 (1H, d).
The compound was prepared as in Example 139(d) from the compound of Example 146(c) and 3-bromo-4-methoxypyridine. Yield 32 mg. 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.76 (2H, dt), 1.93 (1H, m), 2.00 (1H, m), 2.08 (1H, m), 2.50 (1H, t), 2.80 (1H, dt), 3.45 (3H, m), 3.59 (1H, m), 3.91 (3H, s), 4.06 (1H, m), 6.78 (1H, d), 6.94 (1H, dd), 7.08 (1H, d), 7.60 (1H, d), 8.13 (1H, s), 8.23 (1H, d).
The compound was prepared as in Example 139(d) from the compound of Example 146(c) and 3-bromo-5-methoxy-4-methylpyridine (prepared as in US 2006/135447). Yield 71 mg. 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.74 (1H, m), 1.89 (1H, m), 1.99 (1H, m), 2.07 (1H, m), 2.20 (3H, s), 2.75 (2H, q), 3.16 (2H, m), 3.46 (2H, m), 3.91 (3H, s), 4.03 (1H, m), 6.86 (1H, dd), 7.04 (1H, d), 7.58 (1H, d), 8.01 (2H, d).
A mixture of 3-bromo-4-nitropyridine 1-oxide (0.50 g, 2.283 mmol) in EtOH (15 ml) was treated with sodium ethoxide (1.28 ml, 3.43 mmol, 21 w-% solution in EtOH). The mixture was stirred at RT until the reaction was complete. The mixture was concentrated and diluted with brine and extracted with DCM. Combined organic extracts were dried, filtered and evaporated to afford 0.408 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.51 (3H, t), 4.16 (2H, q), 6.74 (1H, d), 8.10 (1H, dd), 8.36 (1H, d). LC-MS: m/z=218.20 (M+1)+.
Phosphorus trichloride (0.30 ml, 3.44 mmol) was added dropwise to a mixture of the compound of Example 167(a) (0.408 g, 1.871 mmol) in dry chloroform (5 ml). The mixture was stirred at 60° C. After the reaction was complete ice was added and the mixture was neutralized with Na2CO3 solution. The mixture was extracted with DCM. Combined organic extracts were dried, filtered and evaporated to afford 0.317 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.51 (3H, t), 4.18 (2H, q), 6.79 (1H, d), 8.37 (1H, d), 8.58 (1H, s). LC-MS: m/z=201.55 (M+1)+.
The compound was prepared as in Example 139(d) from the compound of Example 167(b) and (R)-4-(ethyl(piperidin-3-yl)amino)-2-(trifluoromethyl)benzonitrile hydrochloride. Purification by preparative HPLC afforded 42 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.45 (3H, t), 1.75 (1H, dq), 1.94 (2H, m), 2.05 (1H, m), 2.59 (1H, t), 2.77 (1H, dt), 3.44 (3H, m), 3.59 (1H, m), 4.11 (1H, m), 4.14 (2H, q), 6.75 (1H, dd), 6.93 (1H, dd), 7.05 (1H, d), 7.58 (1H, d), 8.13 (1H, s), 8.20 (1H, d).
The compound was prepared as in Example 139(d) from the compound of Example 146(c) and 4-bromo-3-chloropyridine. Yield 62 mg. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.79 (1H, dq), 1.93 (1H, m), 2.02 (1H, m), 2.11 (1H, m), 2.66 (1H, t), 2.77 (1H, dt), 3.46 (3H, m), 3.69 (1H, m), 4.08 (1H, m), 6.85 (1H, d), 6.91 (1H, dd), 7.11 (1H, d), 7.60 (1H, d), 8.33 (1H, d), 8.43 (1H, s).
A mixture of 3-chlorocyclopent-2-enone (4.98 g, 42.7 mmol), imidazole (5.82 g, 85.0 mmol), TEA (30 ml, 215 mmol) and potassium hydrogencarbonate (86 mg, 0.855 mmol) in benzene (25 ml) was stirred at RT for 48 h. The mixture was diluted with DCM and water. Phases were separated and the aqueous phase was extracted with DCM. The combined organic extracts were washed with brine, dried, filtered and evaporated to afford 3.2 g of the title compound. 1H NMR (400 MHz, CDCl3): 2.66 (2H, m), 3.12 (2H, m), 6.13 (1H, m), 7.24 (1H, s), 7.28 (1H, m), 7.94 (1H, s).
The compound was prepared as in Example 156(b) from the compound of Example 169(a) (0.50 g, 3.37 mmol). Yield 0.324 g. 1H NMR (400 MHz, CDCl3): 1.97 (1H, m), 2.50 (1H, m), 2.70 (1H, m), 2.95 (1H, m), 3.06 (1H, br s), 5.02 (1H, m), 5.77 (1H, m), 7.09 (1H, s), 7.16 (1H, s), 7.69 (1H, s).
The compound was prepared as in Example 156(c) from the compound of Example 169(b) (0.324 g, 2.157 mmol). The reaction was performed in DCM. After the reaction was completed most of the solvent was evaporated and the residue was purified by flash chromatography. Yield 0.265 g. 1H NMR (400 MHz, CDCl3): 2.14 (1H, m), 2.53 (1H, m), 2.80 (1H, m), 3.01 (1H, m), 4.59 (1H, m), 5.73 (1H, m), 7.13 (1H, s), 7.19 (1H, s), 7.73 (1H, s).
The compound was prepared as in Example 156(c) from the compound of Example 169(c) (0.265 g, 1.513 mmol). Crude amine was dissolved in 2-propanol (3 ml) and treated with hydrogen chloride (0.47 ml, 1.88 mmol, 4 M in dioxane). The precipitated solid was filtered, washed with ice cold 2-propanol and dried in vacuo. Yield 0.162 g. 1H NMR (400 MHz, DMSO-d6): 2.04 (1H, m), 2.46 (1H, m), 2.86 (1H, m), 3.10 (1H, m), 4.38 (1H, br s), 6.28 (1H, s), 7.75 (1H, s), 8.21 (1H, s), 8.43 (3H, br s), 9.35 (1H, s).
The compound was prepared as in Example 137(c) from the compound of Example 169(d) (0.16 g, 0.862 mmol). Yield 0.134 g. 1H NMR (400 MHz, CDCl3): 1.95 (1H, m), 2.67 (1H, m), 2.88 (1H, m), 3.00 (1H, m), 4.69 (1H, d), 4.78 (1H, m), 5.73 (1H, m), 6.74 (1H, dd), 6.89 (1H, d), 7.14 (1H, s), 7.18 (1H, m), 7.59 (1H, d), 7.73 (1H, s).
The compound was prepared as in Example 137(d) from the compound of Example 169(e) (0.13 g, 0.408 mmol). Purification by preparative HPLC afforded 26 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.21 (3H, t), 1.91 (1H, m), 2.68 (1H, m), 2.89 (1H, m), 3.02 (1H, m), 3.42 (1H, m), 5.16 (1H, m), 5.68 (1H, m), 6.86 (1H, dd), 7.03 (1H, d), 7.16 (1H, s), 7.22 (1H, s), 7.60 (1H, d), 7.76 (1H, s).
The compound was prepared as in Example 139(d) from the compound of Example 139(c) and 4-bromo-3-fluoropyridine. Purification by preparative HPLC afforded 37 mg of the title compound. TH NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.83 (1H, m), 1.90 (1H, m), 2.01 (1H, m), 2.12 (1H, m), 2.79 (2H, m), 3.46 (2H, m), 3.67 (1H, m), 3.77 (1H, m), 3.99 (1H, m), 6.75 (1H, dd), 6.89 (1H, dd), 7.05 (1H, d), 7.62 (1H, d), 8.18 (1H, d), 8.25 (1H, d).
The compound was prepared as in Example 139(d) from the compound of Example 146(c) and 3-bromo-4-(methoxymethyl)pyridine (WO 2012/015723). Yield 39 mg. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.74 (1H, dq), 1.88 (1H, m), 1.99 (1H, m), 2.07 (1H, m), 2.81 (2H, m), 3.46 (2H, m), 3.46 (3H, s), 4.01 (1H, m), 4.54 (2H, s), 6.86 (1H, dd), 7.02 (1H, dd), 7.39 (1H, d), 7.59 (1H, d), 8.36 (1H, s), 8.37 (1H, d).
The compound was prepared as in Example 137(c) from (R)-1-(pyridin-3-yl)piperidin-3-amine (0.155 g, 0.831 mmol) and 5-bromo-3-chloropicolinonitrile (0.181 g, 0.831 mmol). Yield 28 mg. LC-MS: m/z=313.33 (M+1)+.
The compound was prepared as in Example 137(d) from the compound of Example 172(a) (28 mg, 0.089 mmol). Purification by preparative HPLC gave 2.3 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.76 (1H, dq), 1.88 (1H, m), 2.04 (2H, m), 2.74 (1H, dt), 2.80 (1H, t), 3.47 (2H, q), 3.67 (2H, m), 3.93 (1H, m), 6.99 (1H, d), 7.19 (2H, t), 8.11 (1H, d), 8.15 (1H, t), 8.31 (1H, br s).
A solution of 3-chlorocyclopent-2-enone (1.0 g, 8.58 mmol) in DMF (5 ml) was treated with sodium azide (1.12 g, 17.23 mmol). The mixture was stirred overnight at RT. The mixture was diluted with water and extracted with TBME and DCM. Combined organic extracts were dried, filtered and evaporated. Crude product was filtered to afford 0.514 g of the unstable title compound. 1H NMR (400 MHz, CDCl3): 2.55 (2H, m), 2.70 (2H, m), 5.78 (1H, m).
A mixture of the compound of Example 173(a) (0.23 g, 1.663 mmol) and 1-(triphenylphosphoranylidene)propan-2-one (0.529 g, 1.663 mmol) in DCM (5 ml) was stirred at RT for 48 h. Solvents were evaporated and the residue was purified by flash chromatography to afford 0.527 g of a mixture containing 46% of the title compound and 54% of triphenylphosphine oxide as analyzed by NMR. 1H NMR (400 MHz, CDCl3) of the title compound: 2.53 (3H, d), 2.65 (2H, m), 3.48 (2H, m), 6.27 (1H, t), 7.59 (1H, br s).
The compound was prepared as in Example 156(b) from the compound of Example 173(b) (0.519 g, 1.463 mmol; purity 46% by NMR) to afford 0.509 g the title compound contaminated with triphenylphosphine oxide. 1H NMR (400 MHz, CDCl3): 1.94 (1H, m), 2.10 (1H, d), 2.45 (3H, d), 2.52 (1H, m), 3.06 (1H, m), 3.25 (1H, m), 5.10 (1H, br s), 5.93 (1H, m), 7.48 (1H, s). LC-MS: m/z=166.34 (M+1)+.
The compound was prepared as in Example 156(c) from the compound of Example 173(c) (0.493 g, 1.313 mmol; purity 44% by NMR) using DCM as the solvent. Purification by flash chromatography afforded 0.118 g of the title compound. 1H NMR (400 MHz, CDCl3): 2.14 (1H, m), 2.48 (3H, d), 2.53 (1H, m), 3.21 (2H, m), 4.65 (1H, m), 5.87 (1H, m), 7.50 (1H, m).
The compound was prepared as in Example 156(d) from the compound of Example 173(d) (0.118 g, 0.552 mmol; purity 89% by NMR). Yield 98 mg. 1H NMR (400 MHz, CDCl3): 1.60 (2H, br s), 1.70 (1H, m), 2.43 (3H, s), 2.53 (1H, m), 3.02 (1H, m), 3.19 (1H, m), 4.24 (1H, m), 5.84 (1H, m), 7.47 (1H, s).
The compound was prepared as in Example 137(c) from the compound of Example 173(e) (98 mg, 0.531 mmol; 89% purity by NMR). Yield 98 mg. 1H NMR (400 MHz, CDCl3): 1.95 (1H, m), 2.45 (3H, s), 2.66 (1H, m), 3.14 (1H, m), 3.27 (1H, m), 4.87 (1H, m), 4.97 (1H, m), 5.91 (1H, m), 6.77 (1H, dd), 6.93 (1H, d), 7.49 (1H, s), 7.58 (1H, d).
The compound was prepared as in Example 137(d) from the compound of Example 173(f) (98 mg, 0.294 mg). Purification by flash chromatography afforded 80 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.93 (1H, m), 2.48 (3H, s), 2.67 (1H, m), 3.19 (1H, m), 3.32 (1H, m), 3.46 (2H, m), 5.25 (1H, m), 5.87 (1H, m), 6.89 (1H, dd), 7.05 (1H, d), 7.53 (1H, s), 7.62 (1H, d).
The compound was prepared as in Example 156(a) from 3-fluoro-4-iodopyridine (0.78 g, 3.50 mmol), isopropylmagnesium bromide (4.0 ml, 4.00 mmol; 1 M in THF) and of 4-(ethyl(3-oxocyclohexyl)amino)-2-(trifluoromethyl)benzonitrile (0.808 g, 2.50 mmol). Reaction time was 24 h. Yield 0.357 g of the title compound as a mixture of diastereomers. LC-MS: m/z=407.75 (M+1)+.
The compound was prepared as in Example 132(h) from the compound of Example 174(a) (0.286 g, 0.702 mmol. Yield 0.149 g. 1H NMR (400 MHz, CDCl3): 1.28 (3H, t), 1.94 (1H, m), 2.01 (1H, m), 2.53 (3H, m), 2.65 (1H, m), 3.47 (2H, m), 4.12 (1H, m), 6.23 (1H, m), 6.86 (1H, dd), 7.00 (1H, d), 7.18 (1H, dd), 7.58 (1H, d), 8.36 (1H, d), 8.41 (1H, d).
To an ice cold stirred suspension of lithium aluminium hydride (0.69 g, 20.94 mmol) in THF (40 ml) was added dropwise tert-butyl (3-(methoxy(methyl)carbamoyl)cyclohexyl)carbamate (WO 2002/024679) (4.0 g, 13.96 mmol) in THF (20 ml) followed by stirring for 2 h at 0° C. The mixture was quenched with saturated Na2SO4 solution. The precipitated solids were filtered on celite and washed with EtOAc. The combined organic layer was dried, filtered and concentrated to give 3.0 g of the aldehyde product which was taken for the next step without further purification. A solution of the aldehyde product obtained above (5.0 g, 21.2 mmol) and 2-methoxyethanamine (1.6 g, 21.2 mmol) in THF (50 ml) was stirred for 6 h. Tosylmethyl isocyanide (3.3 g, 16.96 mmol) and piperazine (1.64 g, 19.08 mmol) were added and heated to 50° C. for 16 h. The mixture was cooled to RT, diluted with ice water and washed with EtOAc. The organic layer was washed with brine, dried, filtered and concentrated. Purification by flash chromatography afforded the title compound as a mixture of isomers (83% of the main cis-isomer by chiral LC). LC-MS: m/z=324.12 (M+1). Enantiomers of cis-isomer were separated using chiral preparative HPLC (Column: Daicel Chiralpak IA, 4.6×250 mm, 5 m particle size, eluent A: n-hexane+0.3% DEA, eluent B: EtOH, isocratic elution: 10% B, flow 1.0 ml/min, detection 300 nm) to afford 0.16 g of enantiomer 1 (rt 7.99 min) and 0.15 g of enantiomer 2 (rt 9.0 min).
A solution of compound of Example 175(a), enantiomer 1, (0.20 g, 0.69 mmol) in 5 M HCl in methanol (5 ml) was stirred at 0° C. for 2 h. Solvents were evaporated. Yield 0.15 g. 1H NMR (300 MHz, DMSO-d6): 1.37 (4H, m), 1.85 (2H, d), 2.0 (1H, d), 2.2 (1H, d), 2.95 (1H, m), 31.5 (1H, m), 3.28 (3H, s), 3.69 (2H, t), 4.36 (2H, t), 7.55 (1H, s), 8.33 (3H, br s), 9.04 (1H, s), 14.4 (1H, br s).
The compound was prepared as in Example 137(c) from the compound of Example 175(b), enantiomer 1, (0.135 g, 0.605 mmol). Yield 40 mg. 1H NMR (400 MHz, CDCl3): 1.26 (1H, m), 1.37 (1H, m), 1.55 (1H, m), 1.99 (2H, m), 2.18 (1H, m), 2.31 (1H, m), 2.70 (1H, m), 3.32 (3H, s), 3.46 (1H, m), 3.63 (2H, t), 4.03 (2H, t), 4.69 (1H, d), 6.68 (1H, dd), 6.78 (1H s), 6.84 (1H, d), 7.50 (1H, s), 7.53 (1H, d).
Title compound was prepared as described in Example 137(d) stating from the compound of Example 175(c) (40 mg, 0.102 mmol). Yield 25 mg. 1H NMR (400 MHz, CDCl3): 1.21 (3H, t), 1.42 (1H, m), 1.59 (3H, m), 1.89-2.09 (4H, m), 2.73 (1H, m), 3.30 (3H, s), 3.41 (2H, q), 3.62 (2H, t), 3.78 (1H, m), 4.02 (2H, t), 6.80 (1H, dd), 6.81 (1H, s), 6.95 (1H, d), 7.48 (1H, s), 7.57 (1H, d).
The compound was prepared as in Example 175(b) from enantiomer 2 of cis-tert-butyl (3-(1-(2-methoxyethyl)-1H-imidazol-5-yl)cyclohexyl)carbamate (0.2 g, 0.69 mmol) to afford 0.15 g of the title compound. 1H NMR was identical with that of enantiomer 1.
The compound was prepared as in Example 175 from the compound of Example 176(a), enantiomer 2 (0.115 g, 0.515 mmol). Yield 26 mg. 1H NMR (400 MHz, CDCl3): 1.21 (3H, t), 1.42 (1H, m), 1.59 (3H, m), 1.89-2.09 (4H, m), 2.73 (1H, m), 3.30 (3H, s), 3.41 (2H, q), 3.62 (2H, t), 3.78 (1H, m), 4.02 (2H, t), 6.80 (1H, dd), 6.81 (1H, s), 6.95 (1H, d), 7.48 (1H, s), 7.57 (1H, d).
To an ice cold stirred solution of tert-butyl (3-(hydroxymethyl)cyclohexyl)carbamate (WO 2001/046199) (4.0 g, 17.45 mmol) in CH2Cl2 (40 ml) were added Et3N (3.0 ml, 20.94 mmol), and MsCl (1.35 ml, 17.45 mmol). The mixture was stirred at RT for 4 h. The reaction was quenched with ice water and extracted with EtOAc. The organic layer was dried over anhydrous Na2SO4, filtered and concentrated. Purification by flash chromatography afforded 2.8 g of (3-((tert-butoxycarbonyl)amino)cyclohexyl)methyl methanesulfonate. Then, to an ice cold stirred suspension of NaH (0.328 g, 8.2 mmol, 60% in oil) in THF (10 ml) was added dropwise a solution of imidazole (0.744 g, 10.94 mmol) in THF (10 ml). After 15 min a solution of the methanesulfonate product (2.8 g, 9.12 mmol) obtained above in THF (20 ml) was added dropwise at 0° C. The mixture was heated at 50° C. for 16 h. The mixture was diluted with ice water and extracted with EtOAc. The organic layer was washed with brine, dried over Na2SO4, filtered and concentrated. Purification by flash chromatography afforded 0.715 g of the racemic title compound. LC-MS: m/z=280.1 (M+1). Enantiomers were separated using chiral preparative HPLC (Column: Daicel Chiralpak IA, 4.6×250 mm, 5 μm particle size, eluent A: n-hexane+0.1% DEA, eluent B: EtOH, isocratic elution: 15% B, flow 1.0 ml/min, detection 300 nm) to afford 0.16 g of enantiomer 1 (rt 6.36 min) and 0.15 g of enantiomer 2 (rt 7.55 min).
Title compound was prepared as in Example 175(b) from the compound of Example 177(a), enantiomer 1 (0.8 g, 28.69 mmol). Yield 0.40 g. 1H NMR (300 MHz, DMSO-d6): 0.89 (1H, m), 1.04 (1H, m), 1.24 (2H, m), 1.48 (1H, d), 1.78 (2H, m), 1.94 (2H, m), 2.95 (1H, m), 4.12 (2H, d), 7.72 (1H, s), 7.76 (1H, s), 8.1 (3H, br s), 9.16 (1H, s), 14.6 (1H, br s).
The compound was prepared as in Example 175 from the compound of Example 177(b), enantiomer 1 (0.180 g, 0.714 mmol). Yield 25 mg. 1H NMR (400 MHz, CDCl3): 0.96 (1H, m), 1.18 (3H, t), 1.45 (2H, m), 1.73 (2H, m), 1.90 (4H, m), 3.35 (2H, q), 3.67 (1H, m), 3.86 (2H, d), 6.74 (1H, dd), 6.89 (2H, m), 7.07 (1H, s), 7.43 (1H, s), 7.55 (1H, d).
Title compound was prepared as in Example 175(b) from the compound of Example 102(a) (trans diastereomer). Yield 0.4 g. 1H NMR (300 MHz, DMSO-d6): 1.68 (2H, m), 1.97 (1H, m), 2.2 (3H, m), 3.28 (3H, s), 3.65 (2H, m), 3.7 (2H, t), 4.35 (3H, t), 7.59 (1H, s), 8.29 (3H, br s), 9.04 (1H, s), 14.3 (1H, br s).
The compound was prepared as in Example 175 from the compound of Example 178(a) (0.38 g, 1.347 mmol). Yield 78 mg. 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.82 (2H, m), 2.07 (2H, m), 2.26 (2H, m), 3.31 (1H, m), 3.33 (3H, s), 3.43 (2H, q), 3.62 (2H, t), 4.03 (2H, t), 4.38 (1H, m), 6.81 (1H, dd), 6.85 (1H, s), 6.97 (1H, d), 7.52 (1H, s), 7.56 (1H, d).
A mixture of the compound of Example 150 (0.30 g, 0.866 mmol), p-toluenesulfonyl chloride (0.17 g, 0.892 mmol) and TEA (0.125 ml, 0.896 mmol) in dry DCM (5 ml) was stirred at RT for 1 h. The mixture was diluted with DCM and water. The organic phase was washed with brine, dried, filtered and evaporated to afford 0.34 g of the title compound which was used as such in the next step. LC-MS: m/z=501.77 (M+1)+.
A solution of the compound of Example 179(a) (0.34 g, 0.679 mmol) in dry DCM (7 ml) was treated with triethyloxonium tetrafluoroborate (0.136 g, 0.713 mmol). The mixture was stirred overnight at RT and then treated with methanol (3 ml). After stirring for 30 min the mixture was evaporated to dryness. The residue was purified by flash chromatography to afford the product as a fluoroborate salt. The salt was dissolved in DCM, washed with saturated NaHCO3, water and brine, dried, filtered and evaporated to afford 0.157 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 1.48 (3H, t), 2.70 (1H, m), 2.85 (1H, m), 3.00 (1H, m), 3.11 (1H, m), 3.46 (2H, q), 4.13 (2H, q), 4.67 (1H, m), 5.88 (1H, m), 6.81 (1H, dd), 6.98 (1H, d), 7.01 (1H, s), 7.51 (1H, s), 7.58 (1H, d). The enantiomers were separated using chiral preparative HPLC (Column: Daicel Chiralpak IA, 20 mm×250 mm, 5 μm particle size, eluent A: n-hexane+0.1% DEA, eluent B: EtOH+0.1% DEA, isocratic elution: 10% B, flow 20 ml/min, detection 300 nm) to afford 43.2 mg of enantiomer 1 (rt 35 min) and 43 mg of enantiomer 2 (rt 43 min).
A solution of 3-isobutoxy-5,5-dimethylcyclopent-2-enone (2.13 g, 11.69 mmol) (prepared as in U.S. Pat. No. 4,546,194) in THF (12 ml) was treated with 10% aqueous HCl (36.5 ml, 105 mmol) and stirred at RT for 9 h. Methanol was evaporated and the residue was diluted with brine and extracted with DCM. Organic extracts were washed with brine, dried, filtered and evaporated to afford 0.958 g of the title compound as mixture of the keto and enol forms. Product was used in the next step without purification. 1H NMR (400 MHz, CDCl3) enol form: 1.23 (6H, s), 2.47 (2H, s), 5.19 (1H, s), 9.92 (1H, br s).
The compound of Example 180(a) (0.958 g, 7.59 mmol) in dry DCM (25 ml) at 0-5° C. was treated with a solution of oxalyl chloride (1.325 ml, 15.19 mmol) in dry DCM (6 ml). The mixture was stirred at RT. After the reaction was completed it was quenched with ice water and saturated NaHCO3. The aqueous phase was extracted with DCM. Combined organic extracts were washed with brine, dried, filtered and evaporated to afford 1.16 g of the title compound which was used as such in the next step. 1H NMR (400 MHz, CDCl3): 1.18 (6H, s), 2.72 (2H, d), 6.16 (1H, t).
The compound was prepared as in Example 169(a) from the compound of Example 180(b) and imidazole (1.092 g, 16.04 mmol). The reaction was performed in toluene (13 ml) at 110° C. for 3.5 h. The cooled mixture was diluted with water and extracted with EtOAc. Combined organic extracts were washed with water and brine, dried, filtered and evaporated. Yield 1.06 g. 1H NMR (400 MHz, CDCl3): 1.26 (6H, s), 2.96 (2H, d), 6.03 (1H, t), 7.23 (1H, m), 7.28 (1H, t), 7.91 (1H, s).
The compound was prepared as in Example 156(b) starting from the compound of Example 180(c) (1.06 g, 6.02 mmol). Yield 1.03 g. 1H NMR (400 MHz, CDCl3): 1.19 (6H, s), 2.51 (1H, d), 2.75 (1H, dt), 4.36 (1H, br s), 5.69 (1H, m), 7.11 (1H, s), 7.16 (1H, m), 7.68 (1H, s).
The compound was prepared as in Example 156(c) starting from the compound of Example 180(d) (0.376 g, 2.11 mmol). Purification by flash chromatography afforded 0.248 g of the title compound (purity 77% by NMR). 1H NMR (400 MHz, CDCl3): 1.27 (3H, s), 1.28 (3H, s), 2.55 (1H, d), 2.78 (1H, dt), 4.02 (1H, m), 5.67 (1H, m), 7.13 (1H, m), 7.18 (1H, t), 7.69 (1H, s).
A mixture of the compound of Example 180(e) (0.58 g, 1.798 mmol; purity 63%) and triphenylphosphine (0.943 g, 3.60 mmol) in methanol (10 ml) was stirred at 65° C. until all the starting material had reacted (monitored by TLC and LC-MS). The cooled reaction mixture was treated with 1M NaOH (5 ml) and stirred at RT until complete. Methanol was evaporated, the residue was acidified with 2 M HCl and the aqueous phase was washed with EtOAc. Aqueous phase was basified with 2 M NaOH and extracted with EtOAc. Organic extracts were washed with brine, dried, filtered and evaporated to afford 0.231 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.11 (3H, s), 1.19 (3H, s), 2.55 (1H, dt), 2.65 (1H, dt), 3.61 (1H, m), 5.59 (1H, m), 7.08 (1H, s), 7.14 (1H, s), 7.65 (1H, s).
The compound was prepared as in Example 137(c) from the compound of Example 180(f) (0.23 g, 1.298 mmol). Yield 0.284 g. 1H NMR (400 MHz, CDCl3): 1.15 (3H, s), 1.37 (1H, s), 2.60 (1H, d), 2.73 (1H, dt), 4.36 (1H, m), 5.00 (1H, d), 5.56 (1H, m), 6.76 (1H, dd), 6.93 (1H, d), 7.11 (1H, s), 7.15 (1H, t), 7.55 (1H, d), 7.64 (1H, s).
The compound was prepared as in Example 136(d) from the compound of Example 180(g) (0.275 g, 0.794 mmol). Purification by preparative HPLC gave 0.145 g of the title compound. 1H NMR (400 MHz, CDCl3): 0.98 (3H, s), 1.19 (3H, t), 1.39 (3H, s), 2.62 (1H, d), 2.86 (1H, dt), 3.17-3.42 (2H, m), 4.67 (1H, t), 5.64 (1H, m), 6.85 (1H, dd), 7.02 (1H, d), 7.16 (1H, s), m 7.21 (1H, m), 7.60 (1H, d), 7.74 (1H, s). The enantiomers were separated using chiral preparative HPLC (Column: Daicel Chiralpak IA, 20 mm×250 mm, 5 μm particle size, eluent A: n-hexane+0.1% DEA, eluent B: EtOH+0.1% DEA, isocratic elution: 10% B, flow 20 ml/min, detection 300 nm) to afford 54 mg of enantiomer 1 (rt 18 min) and 41 mg of enantiomer 2 (rt 22.1 min).
The compound was prepared as in Example 137(c) from (R)-1-(pyridin-3-yl)piperidin-3-amine hydrochloride (0.167 g, 0.50 mmol) and 2-bromo-1,3,4-thiadiazole (83 mg, 0.50 mmol. Yield 88 mg. 1H NMR (400 MHz, CDCl3): 1.26 (3H, t), 1.87 (2H, m), 2.00 (1H, m), 2.12 (1H, m), 3.14 (1H, m), 3.19 (1H, m), 3.46 (2H, m), 3.92 (2H, m), 4.20 (1H, m), 6.96 (1H, dd), 7.07 (1H, d), 8.51 (1H, s).
The compound was prepared as in Example 169(a) from 3-chlorocyclopent-2-one (1.0 g, 8.58 mmol) and 2H-1,2,3-triazole (1.0 ml, 17.26 mmol) at 80° C. Yield 1.10 g. 1H NMR (400 MHz, CDCl3): 2.68 (2H, m), 3.31 (2H, m), 6.60 (1H, t), 7.92 (2H, s).
The compound was prepared as in Example 156(b) from the compound of Example 182(a) (1.08 g, 7.24 mmol). Yield 1.037 g. 1H NMR (400 MHz, CDCl3): 1.98 (1H, m), 2.55 (1H, m), 2.96 (1H, m), 3.21 (1H, m), 5.08 (1H, m), 6.30 (1H, m), 7.74 (2H, s).
The compound of Example 182(b) (0.151 g, 1.00 mmol) was dissolved in MeOH (20 ml) and hydrogenated in a H-Cube continuous-flow hydrogenation apparatus (ThalesNano Inc.) using 10% Pd/C catalyst cartridge. The reduction was conducted at 60° C. using 10 bar hydrogen pressure with a flow rate of 1 ml/min. The solvents were evaporated to afford 0.152 g of the title compound as a mixture of diastereomers (ratio 70:30 by NMR). The product was used as such in the next step.
A cooled mixture of the compound of Example 182(c) (0.426 g, 2.78 ml) and TEA (0.58 ml, 4.16 mmol) in dry DCM (25 ml) was treated with a solution of methanesulfonyl chloride (0.32 ml, 4.13 mmol) in dry DCM (3 ml) and stirred overnight at RT. The mixture was washed with saturated NH4Cl, water and brine, dried, filtered and evaporated to obtain 0.594 g of 3-(2H-1,2,3-triazol-2-yl)cyclopentyl methanesulfonate. This material was dissolved in DMSO (8 ml) and treated with sodium azide (0.334 g, 5.14 mmol) and stirred at 60° C. After the reaction was completed the cooled mixture was diluted with water and extracted with TBME. Combined organic extracts were washed with brine, dried, filtered and evaporated to afford 0.377 g of the title compound as a mixture of diastereomers. The product was used as such in the next step.
The compound was prepared as in Example 156(d) from the compound of Example 182(d) (0.377 g, 2.12 mmol). The crude product was dissolved in 2-propanol (3 ml) and treated with hydrogen chloride (0.822 ml, 3.29 mmol; 4 M in dioxane) to afford a gummy material which was triturated with ether to afford 0.173 g of the title compound as a mixture of diastereomers. 1H NMR (400 MHz, DMSO-d6) of the main diastereomer: 1.75 (1H, m), 2.03 (1H, m), 2.20 (2H, m), 2.41 (2H, m), 3.80 (1H, m), 5.27 (1H, m), 7.79 (2H, s), 8.15 (3H, br s).
The compound was prepared as in Example 137(c) from the compound of Example 182(e) (0.173 g, 0.917 mmol) using 3.95 molar equivalent of DIPEA. Yield 0.168 g as a mixture of diastereomers. LC-MS: m/z=322.36 (M+1)+.
The compound was prepared as in Example 137(d) from the compound of Example 182(f) (0.182 g, 0.566 mmol). Yield of the crude product was 0.191 g. The isomers were separated by chiral preparative HPLC (Column: Daicel Chiralpak IA, 20 mm×250 mm, 5 m particle size, eluent A: n-hexane, eluent B: EtOH, isocratic elution: 10% B, flow 20 ml/min, detection 295 nm). Four stereoisomers were obtained. Enantiomer 1 of cis-diastereomer (rt 11.3 min, yield 12 mg) and enantiomer 2 of cis-diastereomer (rt 12.3 min, yield 10 mg), 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 2.11 (2H, m), 2.20-2.40 (3H, m), 2.68 (1H, dt), 3.51 (2H, m), 4.32 (1H, m), 5.16 (1H, m), 6.85 (1H, dd), 7.01 (1H, d), 7.59 (1H, d), 7.63 (2H, s), and enantiomer 1 of trans-diastereomer, (rt 13.0 min, yield 39.5 mg) and enantiomer 2 of trans-diastereomer (rt 14.5 min, yield 47.8 mg), 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.84 (1H, m), 2.08 (1H, m), 2.24 (2H, m), 2.53 (2H, m), 3.43 (2H, m), 4.74 (1H, m), 5.23 (1H, m), 6.89 (1H, dd), 7.10 (1H, d), 7.59 (1H, d), 7.63 (2H, s).
A mixture of cis-tert-butyl (4-(hydroxymethyl)cyclopent-2-en-1-yl)carbamate (WO 2005/075426) (5.33 g, 25.0 mmol), TEA (12.50 ml, 90.0 mmol), DMSO (25 ml) and DCM (45 ml) was cooled to 0-5° C. and treated portionwise with a solution of sulfur trioxide-pyridine complex (7.96 g, 50.0 mmol) in DMSO (25 ml). The mixture was stirred at RT. After the reaction was completed the mixture was diluted with water and brine and extracted with DCM. Combined organic extracts were washed with saturated NH4Cl, water and brine, dried, filtered and evaporated. Crude product was purified by flash chromatography to afford 2.65 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.44 (9H, s), 2.40 (1H, m), 2.51 (1H, m), 2.92 (1H, m), 3.02 (1H, m), 4.39 (1H, br s), 4.68 (1H, br s), 6.80 (1H, m), 9.75 (1H, s).
A mixture of the compound of Example 183(a) (0.423 g, 2.00 mmol) and N,N-dimethylethane-1,2-diamine (0.274 ml, 2.50 mmol) in DCM (10 ml) was stirred at RT until all the aldehyde had reacted. Then tosylmethyl isocyanide (0.469 g, 2.40 mmol) and DBU (0.603 ml, 2.00 mmol) were added and the stirring was continued at RT. After the reaction was completed the mixture was diluted with DCM and washed with water and brine. Organic phase was dried, filtered and evaporated. Purification by flash chromatography gave 0.416 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.45 (9H, s), 2.28 (6H, s), 2.41 (1H, m), 2.55 (1H, m), 2.61 (2H, t), 2.95 (1H, dd), 3.08 (1H, dd), 4.10 (2H, t), 4.37 (1H, br s), 4.77 (1H, br s), 5.75 (1H, s), 6.97 (1H, s), 7.50 (1H, s).
A mixture of the compound of Example 183(b) (0.416 g, 1.298 mmol) and methanol (6 ml) was treated with hydrogen chloride (1.30 ml, 5.20 mmol; 4 M solution in dioxane) and stirred at RT. After the reaction was completed the mixture was concentrated. The residue was triturated with ether to afford 0.408 g of the title compound. 1H NMR (400 MHz, DMSO-d6): 2.70 (2H, m), 2.85 (6H, s), 2.94 (1H, m), 2.99 (1H, m), 3.09 (1H, m), 3.13 (1H, m), 3.96 (1H, br s), 4.82 (2H, m), 6.35 (1H, s), 7.80 (1H, s), 8.39 (3H, br s), 9.29 (1H, s), 11.26 (1H, br s).
The compound was prepared as in Example 137(c) starting from the compound of Example 183(c) (0.408 g, 1.294 mmol) and using 4.44 equivalent of DIPEA. Yield 0.139 g. 1H NMR (400 MHz, CDCl3): 2.29 (6H, s), 2.53 (1H, m), 2.63 (3H, m), 3.10 (1H, m), 3.21 (1H, m), 4.13 (2H, t), 4.28 (1H, m), 5.05 (1H, d), 5.83 (1H, m), 6.72 (1H, dd), 6.88 (1H, d), 6.97 (1H, s), 7.53 (1H, s), 7.57 (1H, d).
The compound was prepared as in Example 137(d) starting from the compound of Example 183(d) (0.139 g, 0.357 mmol). Extraction with DCM. Purification by preparative HPLC afforded 57 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 2.31 (6H, s), 2.67 (2H, t), 2.70 (1H, m), 2.84 (1H, m), 3.00 (1H, m), 3.11 (1H, m), 3.47 (2H, q), 4.17 (2H, t), 4.67 (1H, m), 5.90 (1H, m), 6.81 (1H, dd), 6.98 (1H, d), 7.00 (1H, s), 7.56 (1H, s), 7.58 (1H, d).
A mixture of the compound of Example 180(b) (1.71 g, 11.83 mmol) and sodium 1,2,4-triazol-1-ide (1.507 g, 16.56 mmol) in DMF (20 ml) was stirred at 80° C. After the reaction was completed the cooled mixture was diluted with water and extracted with DCM. Combined organic extracts were washed water and brine, dried, filtered and evaporated to afford 2.14 g of the title compound which was in the next step without purification. 1H NMR (400 MHz, CDCl3): 1.27 (6H, s), 3.04 (2H, d), 6.37 (1H, m), 8.14 (1H, s), 8.52 (1H, s).
The compound was prepared as in Example 156(b) from the compound of Example 184(a) (2.10 g, 11.85 mmol). Yield 1.85 g. 1H NMR (400 MHz, CDCl3): 1.20 (3H, s), 1.21 (3H, s), 1.70 (1H, m), 2.61 (dd), 2.82 (1H, dt), 4.41 (br s), 6.97 (1H, m), 8.01 (1H, s), 8.23 (1H, s).
The compound was prepared as in Example 156(c) from the compound of Example 184(b). After the reaction was completed the mixture was diluted with water and extracted with EtOAc. Organic phase was washed with 2 M HCl, water and brine, dried, filtered and evaporated. Purification by flash chromatography afforded 0.797 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.26 (3H, s), 1.28 (3H, s), 2.65 (1H, d), 2.85 (1H, dt), 4.07 (1H, s), 6.06 (1H, m), 8.02 (1H, s), 8.25 (1H, s).
The compound was prepared as in Example 180(f) starting from the compound of Example 184(c) (0.797 g, 3.90 mmol). Crude product was dissolved in 2-propanol (2.5 ml) and treated with HCl (1.20 ml, 4.80 mmol; 4 M in dioxane) and ether. The precipitated solid was filtered, washed with ether and dried in vacuo. Yield 0.604 g. 1H NMR (400 MHz, DMSO-d6): 1.22 (2×3H, 2×s), 2.73 (1H, d), 2.95 (1H, dt), 3.85 (1H, m), 5.99 (1H, m), 8.21 (1H, s), 8.38 (3H, br s), 8.96 (1H, s).
The compound was prepared as in Example 137(c) starting from the compound of Example 184(d) (0.604 g, 2.81 mmol). Yield 0.36 g. 1H NMR (400 MHz, CDCl3): 1.17 (3H, s), 1.40 (1H, s), 2.73 (1H, m), 2.85 (1H, dt), 4.42 (1H, m), 4.52 (1H, d), 5.98 (1H, m), 6.75 (1H, dd), 6.91 (1H, d), 7.59 (1H, d), 8.02 (1H, s), 8.23 (1H, s).
The compound was prepared as in Example 137(d) from the compound of Example 184(e) (0.36 g, 1.036 mmol). Extracted with DCM. Purification by flash chromatography afforded 0.30 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.00 (3H, s), 1.20 (3H, t), 1.41 (3H, s), 2.71 (1H, d), 2.91 (1H, dt), 3.23 (1H, m), 3.39 (1H, m), 4.72 (1H, t), 6.08 (1H, m), 6.86 (1H, dd), 7.03 (1H, d), 7.61 (1H, d), 8.06 (1H, s), 8.27 (1H, s). The enantiomers of were separated using chiral preparative HPLC (Column: Daicel Chiralpak IA, 20 mm×250 mm, 5 μm particle size, eluent A: n-hexane+0.2% DEA, eluent B: IPA+0.2% DEA, isocratic elution: 5% B, flow 20 ml/min, detection 300 nm) to afford 71 mg of enantiomer 1 (rt 25.5 min) and 67 mg of enantiomer 2 (rt 28 min).
The compound was prepared as in Example 183(b) starting from tert-butyl (3-formylcyclopent-3-en-1-yl)carbamate (0.423 g, 2.00 mmol) and 2-morpholinoethan-amine (0.394 ml, 3.00 mmol). Yield 0.370 g. 1H NMR (400 MHz, CDCl3): 1.45 (9H, s), 2.41 (1H, m), 2.46 (4H, m), 2.55 (1H, m), 2.68 (2H, t), 2.96 (1H, dd), 3.08 (1H, dd), 3.70 (4H, m), 4.13 (1H, t), 4.37 (1H, br s), 4.75 (1H, br s), 5.74/1H, s), 6.98 (1H, s), 7.53 (1H, s).
The compound was prepared as in Example 183(c) starting from the compound of Example 185(a) (0.37 g, 1.021 mmol). Yield 0.394 g. 1H NMR (400 MHz, DMSO-d6): 2.70 (2H, m), 2.96 (1H, m), 3.11 (1H, m), 3.2-3.7 (6H, m), 3.92 (6H, m), 4.83 (1H, s), 6.36 (1H, s), 7.78 (1H, s), 8.36 (3H, br s), 9.24 (1H, s), 11.86 (1H, br s).
The compound was prepared as in Example 137(c) starting from the compound of Example 185(b) (0.394 g, 1.022 mmol). Yield 0.158 g. 1H NMR (400 MHz, CDCl3): 2.48 (4H, m), 2.53 (1H, m), 2.65 (1H, m), 2.70 (2H, t), 3.11 (1H, m), 3.23 (1H, m), 3.70 (4H, m), 4.16 (2H, t), 4.29 (1H, m), 4.74 (1H, d), 5.81 (1H, m), 6.71 (1H, dd), 6.87 (1H, d), 7.00 (1H, s), 7.57 (1H, s), 7.59 (1H, d).
The compound was prepared as in Example 137(d) starting from the compound of Example 185(c) (0.158 g, 0.366 mmol). Extraction with DCM. Yield 99 mg. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 2.49 (4H, m), 2.71 (1H, m), 2.72 (2H, t), 2.85 (1H, m), 3.00 (1H, m), 3.10 (1H, m), 3.47 (2H, q), 3.71 (4H, m), 4.18 (2H, t), 4.67 (1H, m), 5.89 (1H, m), 6.81 (1H, dd), 6.98 (1H, d), 7.00 (1H, br s), 7.57 (1H, d), 7.59 (1H s).
To a solution of 3-amino-2,2-dimethylcyclopentanol (WO 2012/125886) (10.0 g, 0.078 mol) in MeOH (120 ml) were added glyoxal (40% aqueous solution, 15.1 ml, 0.104 mol), NH4OAc (17.91 g, 0.233 mol) and HCHO (35% aqueous solution, 17.46 ml, 0.233 mol). The mixture was stirred at 60° C. for 8 h. The solvent was evaporated and the residue was basified by 2 M KOH solution and extracted with DCM. The organic layer was washed with brine, dried, filtered and concentrated. Purification by column chromatography afforded 3.8 g of the title compound. 1HNMR (400 MHz; DMSO-d6): 7.65 (s, 1H), 7.18 (s, 1H), 6.88 (s, 1H), 4.78 (bs, 1H), 4.28-4.40 (m, 1H), 3.64-3.72 (m, 1H), 2.02-2.20 (m, 3H), 1.54 (bs, 1H), 0.89 (s, 3H), 0.56 (s, 3H). LC-MS: m/z=181.08 (M+1)+.
To a solution of the compound of Example 186(a) (1.7 g, 0.011 mol) in DCM (65 ml) was added Dess-Martin periodinane (12.7 g, 0.023 mol). The mixture was stirred at RT for 12 h and quenched with aqueous Na2S2O3.5H2O solution. The mixture was stirred for 30 min and extracted with DCM. The organic layer was washed with aqueous NaHCO3 solution and brine, dried, filtered and concentrated. Purification by column chromatography afforded 1.4 g of the title compound. 1HNMR (400 MHz; DMSO-d6): 7.73 (s, 1H), 7.25 (s, 1H), 6.94 (s, 1H), 4.57 (t, 1H), 2.30-2.58 (m, 4H), 1.03 (s, 3H), 0.58 (s, 3H). LC-MS: m/z=179.30 (M+1)+.
To a solution of the compound of Example 186(b) (3.0 g, 0.017 mol) in EtOH (50 ml) were added molecular sieves (4° A, 12.9 g) and NH4OAc (12.9 g, 0.167 mol). The mixture was heated at 45° C. for 2 h, cooled to RT. NaCNBH3 (3.14 g, 0.050 mol) was added and the mixture was refluxed for 20 h. The reaction mass was filtered through a Celite bed and washed with EtOH. The filtrate was concentrated under reduced pressure to afford 3.0 g of a viscous oil. LC-MS: m/z=180.15 (M+1)+. Oil was dissolved in DCM (15 ml). TEA (5.6 ml, 0.040 mol) and Boc2O (6.0 ml, 0.020 mol) were added and the mixture was stirred at RT for overnight. The reaction was quenched with water and extracted with DCM. The organic phase was washed with water, dried, filtered and concentrated. Purification by column chromatography gave 300 mg of the title compound as a mixture of diastereomers. 1H-NMR (400 MHz; DMSO-d6) of the major diastereomer: 7.65 (s, 1H), 7.20 (s, 1H), 7.16 (s, 1H), 6.85 (s, 1H), 4.17-4.25 (m, 1H), 3.72-3.76 (m, 1H), 2.10-2.19 (m, 1H), 1.92-12.07 (m, 2H), 1.70-1.79 (m, 1H), 1.39 (s, 9H), 0.83 (s, 3H), 0.49 (s, 3H).
To a solution of the compound of Example 186(c) (0.250 g, 0.892 mmol) in dioxane (2 ml) was added 4 M HCl in dioxane (5 ml). The mixture was stirred at RT for 5 h. The mixture was concentrated under reduced pressure and the solid formed was washed with DCM and dried under vacuum to give 150 mg of the title compound as a mixture of diastereomers. LC-MS: m/z=180.15 (M+1)+
The compound was prepared as in Example 183(d) from the compound of Example 186(d) (97 mg, 0.385 mmol). Yield 70 mg as a mixture of diastereomers. 1H NMR (400 MHz, CDCl3) of the major diastereomer: 0.77 (3H, s), 1.10 (3H, s), 1.67 (1H, m), 2.24-2.4 (3H, m), 3.75 (1H, q), 4.22 (1H, m), 4.53 (1H, d), 6.76 (1H, dd), 6.93 (1H, d), 6.97 (1H, s), 7.10 (1H, s), 7.55 (1H, s), 7.56 (1H, d).
The compound was prepared as in Example 137(d) from the compound of Example 186(e) (70 mg, 0.201 mmol). Extracted with DCM. Preparative HPLC afforded 32 mg of the title compound as a mixture of diastereomers. 1H NMR (400 MHz, CDCl3) of the major diastereomer: 0.74 (3H, s), 1.06 (3H, s), 1.18 (3H, t), 2.12 (1H, m), 2.30 (3H, m), 3.54 (2H, q), 4.27 (2H, m), 6.96 (2H, m), 7.10 (1H, s), 7.14 (1H, s), 7.58 (1H, d), 7.59 (1H, s).
The compound was prepared as in Example 183(b) starting from tert-butyl (3-formylcyclopent-3-en-1-yl)carbamate (0.423 g, 2.00 mmol) and 2-(4-methoxyphenoxy)ethanamine (0.401 g, 2.40 mmol). Yield 0.434 g. 1H NMR (400 MHz, CDCl3): 1.45 (9H, s), 2.40 (1H, m), 2.55 (1H, m), 2.94 (1H, dd), 3.08 (1H, dd), 3.75 (3H, s), 4.17 (2H, t), 4.36 (1H, m), 4.39 (2H, t), 4.79 (1H, br s), 5.74 (1H, m), 6.76-6.83 (4H, m), 6.99 (1H, s), 7.56 (1H, s).
The compound was prepared as in Example 183(c) from the compound of Example 187(a) (0.434 g, 1.086 mmol). Crude product was dissolved in water, basified with 2 M NaOH and extracted with DCM. Combined organic extracts were washed brine, dried, filtered and evaporated. Yield 0.31 g. 1H NMR (400 MHz, CDCl3): 2.31 (1H, m), 2.45 (1H, m), 2.86 (1H, m), 2.99 (1H, m), 3.75 (1H, m), 3.76 (3H, s), 4.18 (2H, t), 4.41 (2H, t), 5.73 (1H, m), 6.80 (4H, m), 6.99 (1H, s), 7.58 (1H, s).
The compound was prepared as in Example 137(c) from the compound of Example 187(b) (0.456 g, 1.523 mmol). Yield 0.369 g. 1H NMR (400 MHz, CDCl3): 2.51 (1H, m), 2.64 (1H, m), 3.09 (1H, m), 3.23 (1H, m), 3.76 (3H, s), 4.19 (2H, t), 4.28 (1H, m), 4.43 (2H, t), 4.69 (1H, d), 5.81 (1H, m), 6.69 (1H, dd), 6.80 (4H, m), 6.85 (1H, d), 7.02 (1H, s), 7.58 (1H, d), 7.63 (1H, s).
The compound was prepared as in Example 137(d) from the compound of Example 187(c) (0.369 g, 0.788 mmol). Extracted with DCM. Yield 0.285 g. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 2.69 (1H, m), 2.85 (1H, m), 2.99 (1H, m), 3.10 (1H, m), 3.45 (2H, q), 3.77 (3H, s), 4.22 (2H, t), 4.45 (2H, t), 4.66 (1H, m), 5.88 (1H, m), 6.81 (5H, m), 6.98 (1H, d), 7.02 (1H, s), 7.57 (1H, d), 7.64 (1H, s).
The compound was prepared as in Example 183(b) from tert-butyl (3-formylcyclopent-3-en-1-yl)carbamate (0.423 g, 2.00 mmol) and isobutylamine (0.28 ml, 2.82 mmol). Yield 0.447 g. 1H NMR (400 MHz, CDCl3): 0.92 (6H, d), 1.45 (9H, s), 2.04 (1H, m), 2.40 (1H, m), 2.54 (1H, m), 2.95 (1H, dd), 3.07 (1H, dd), 3.80 (2H, d), 4.36 (1H, br s), 4.75 (1H, br s), 5.69 (1H, br s), 6.99 (1H, s), 7.39 (1H, s).
The compound was prepared as in Example 187(b) from the compound of Example 188(a) (0.433 g, 1.418 mmol). Yield 0.166 g. 1H NMR (400 MHz, CDCl3): 0.92 (6H, d), 2.06 (1H, m), 2.32 (1H, m), 2.44 (1H, m), 2.86 (1H, dd), 2.98 (1H, dd), 3.73 (1H, m), 3.80 (2H, m), 5.69 (1H, s), 6.98 (1H, s), 7.38 (1H, s).
The compound was prepared as in Example 137(c) from the compound of Example 188(b) (0.166 g, 0.809 mmol). Yield 0.120 g. 1H NMR (400 MHz, CDCl3): 0.94 (6H, d), 2.05 (1H, m), 2.51 (1H, d), 2.64 (1H, d), 3.10 (1H, dd), 3.22 (1H, dd), 3.82 (2H, d), 4.28 (1H, m), 4.67 (1H, d), 5.75 (1H, br s), 6.71 (1H, dd), 6.87 (1H, d), 7.01 (1H, s), 7.42 (1H, s), 7.58 (1H, d).
The compound was prepared as in Example 137(d) from the compound of Example 188(c). Extracted with DCM. Yield 86 mg. 1H NMR (400 MHz, CDCl3): 0.95 (6H, m), 1.23 (3H, t), 2.08 (1H, m), 2.69 (1H, m), 2.84 (1H, m), 2.99 (1H, dd), 3.09 (1H, dd), 3.46 (2H, q), 3.85 (2H, m), 4.66 (1H, m), 5.82 (1H, m), 6.81 (1H, dd), 6.98 (1H, d), 7.01 (1H, s), 7.44 (1H, s), 7.58 (1H, d).
The compound was prepared as in Example 183(b) from tert-butyl (3-formylcyclopent-3-en-1-yl)carbamate (0.423 g, 2.00 mmol) and 2-methoxyethylamine (0.25 ml, 2.88 mmol). Yield 0.361 g. 1H NMR (400 MHz, CDCl3): 1.45 (9H, s), 2.40 (1H, m), 2.54 (1H, m), 2.95 (1H, dd), 3.07 (1H, dd), 3.34 (3H, s), 3.64 (2H, t), 4.19 (2H, t), 4.36 (1H, br s), 4.77 (1H, br s), 5.71 (1H, s), 6.98 (1H, s), 7.52 (1H, s).
The compound was prepared as in Example 183(c) from the compound of Example 189(a) (0.361 g, 1.174 mmol). Yield 0.244 g. 1H NMR (400 MHz, DMSO-d6): 2.63 (1H, m), 2.71 (1H, m), 2.94 (1H, m), 3.08 (1H, m), 3.27 (3H, s), 3.73 (2H, m), 3.94 (1H, m), 4.48 (2H, t), 6.25 (1H, s), 7.80 (1H, s), 8.33 (3H, br s), 9.14 (1H, d).
The compound was prepared as in Example 183(d) from the compound of Example 189(b) (0.344 g, 1.166 mmol). Yield 0.219 g. 1H NMR (400 MHz, CDCl3): 2.51 (1H, m), 2.64 (1H, m), 3.09 (1H, m), 3.22 (1H, m), 3.34 (3H, s), 3.67 (2H, t), 4.21 (2H, t), 4.28 (1H, m), 4.71 (1H, d), 5.78 (1H, br s), 6.71 (1H, dd), 6.87 (1H, d), 7.00 (1H, s), 7.55 (1H, s), 7.58 (1H, d).
The compound was prepared as in Example 137(d) from the compound of Example 189(c) (0.109 g, 0.29 mmol). Extraction with DCM. Yield 79 mg. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 2.69 (1H, m), 2.84 (1H, m), 2.99 (1H, dd), 3.10 (1H, dd), 3.36 (3H, s), 3.47 (2H, q), 3.69 (2H, t), 4.24 (2H, t), 4.67 (1H, m), 5.85 (1H, s), 6.81 (1H, dd), 6.98 (1H, d), 7.01 (1H, s), 7.57 (1H, s), 7.58 (1H, d).
The compound was prepared as in Example 137(d) from the compound of Example 189(c) (0.11 g, 0.292 mmol) and iodomethane (45 μl, 0.731 mmol). Yield 59 mg. 1H NMR (400 MHz, CDCl3): 2.64 (1H, m), 2.79 (1H, m), 2.79 (1H, dd), 2.93 (3H, s), 3.02 (1H, dd), 3.13 (1H, dd), 3.36 (3H, s), 3.68 (2H, t), 4.24 (2H, t), 4.80 (1H, m), 5.84 (1H, br s), 6.87 (1H, dd), 7.03 (2H, m), 7.56 (1H, s), 7.60 (1H, d).
A solution of tert-butyl (3-formylcyclopent-3-en-1-yl)carbamate (5.0 g, 23.66 mmol) and 2-methoxy-2-methylpropan-1-amine (2.44 g, 23.66 mmol) in THF (50 ml) was stirred for 6 h. TosMIC (3.7 g, 18.96 mmol) and K2CO3 (2.94 g, 21.29 mmol) were added and stirred for 16 h (monitored by TLC). The mixture was diluted with cold water and extracted with EtOAc. The combined organic layers were washed with brine, dried, filtered and concentrated. Purification by flash chromatography afforded 1.0 g of the title compound. LC-MS: m/z=336.2 (M+1). Enantiomers were separated using chiral preparative HPLC (Column: Daicel Chiralpak IA, 4.6×250 mm, 5 μm particle size, eluent A: n-hexane+0.1% DEA, eluent B: EtOH, isocratic elution: 30% B, flow 1.0 ml/min, detection 300 nm) to afford 0.35 g of enantiomer 1 (rt 4.04 min) and 0.35 g of enantiomer 2 (rt 4.83 min).
The compound was prepared as in Example 175(b) from the compound of Example 191(a), enantiomer 1 (0.35 g). Yield 0.2 g. 1H NMR (300 MHz, d6-DMSO): 1.11 (6H, s), 2.62 (1H, m), 2.71 (1H, m), 2.93 (1H, dd), 3.05 (1H, dd), 3.14 83H, s), 3.93 (1H, m), 4.28 (2H, s), 6.27 (1H, s), 7.75 (1H, s), 8.3 (3H, br s), 8.9 (1H, s), 14.8 (1H, br s).
The compound was prepared as in Example 183(d) from the compound of Example 191(b), enantiomer 1 (0.188 g, 0.61 mmol). Yield 0.124 g. 1H NMR (400 MHz, CDCl3): 1.12 (3H, s), 1.13 (3H, s), 2.50 (1H, m), 2.62 (1H, m), 3.07 (1H, m), 3.19 (3H, s), 3.20 (1H, m), 4.01 (2H, s), 4.27 (1H, m), 4.90 (1H, d), 5.84 (1H, br s), 6.70 (1H, dd), 6.86 (1H, d), 7.00 (1H, s), 7.57 (1H, d), 7.61 (1H, s).
The compound was prepared as in Example 137(d) starting from the compound of Example 191(c), enantiomer 1 (0.124 mg, 0.307 mmol). Extracted with DCM. Yield 76 mg. 1H NMR (400 MHz, CDCl3): 1.14 (3H, s), 1.15 (3H, s), 1.23 (3H, t), 2.68 (1H, m), 2.83 (1H, m), 2.97 (1H, m), 3.08 (1H, m), 3.21 (3H, s), 3.46 (2H, q), 4.05 (2H, s), 4.65 (1H, m), 5.91 (1H, m), 6.81 (1H, dd), 6.98 (1H, d), 6.99 (1H, s), 7.57 (1H, dd), 7.64 (1H, s).
The compound was prepared as in Example 191 from the compound of Example 191(b), enantiomer 2 (0.162 g, 0.526 mmol). Yield 49 mg. 1H NMR (400 MHz, CDCl3): 1.14 (3H, s), 1.15 (3H, s), 1.23 (3H, t), 2.68 (1H, m), 2.83 (1H, m), 2.97 (1H, m), 3.08 (1H, m), 3.21 (3H, s), 3.46 (2H, q), 4.05 (2H, s), 4.65 (1H, m), 5.91 (1H, m), 6.81 (1H, dd), 6.98 (1H, d), 6.99 (1H, s), 7.57 (1H, dd), 7.64 (1H, s).
The compound was prepared as in Example 137(d) starting from the compound of Example 180(g) (0.435 g, 1.256 mmol) and iodomethane (0.172 ml, 2.76 mmol). Yield 0.322 g. 1H NMR (400 MHz, CDCl3): 1.01 (1H, s), 1.40 (3H, s), 2.64 (1H, dd), 2.85 (1H, dt), 2.90 (3H, s), 4.69 (1H, t), 5.55 (1H, m), 6.88 (1H, dd), 7.04 (1H, d), 7.16 (1H, m), 7.21 (1H, m), 7.62 (1H, dd), 7.74 (1H, s). The enantiomers were separated using chiral preparative HPLC (Column: Daicel Chiralpak IA, 20 mm×250 mm, 5 m particle size, eluent A: MTBE+0.2% DEA, eluent B: THF+0.2% DEA, isocratic elution: 2% B, flow 20 ml/min, detection 300 nm) to afford 83 mg of enantiomer 1 (rt 17 min) and 81 mg of enantiomer 2 (rt 22.5 min).
To a solution of 2,2-dimethylcyclopentane-1,3-dione (20.0 g, 0.159 mol) in toluene (250 ml) were added ethylene glycol (9 ml, 0.159 mol) and p-TSOH (cat). The mixture was refluxed under Dean-Stark trap for 4 h. The solvent was removed and the residue was purified by column chromatography to give 12.1 g of the title compound. 1H NMR (400 MHz; DMSO-d6): 3.85-3.97 (m, 4H), 2.32 (t, 2H), 2.05 (t, 2H), 0.92 (s, 6H).
To a solution of the compound of Example 194(a) (8.0 g, 0.047 mol) in MeOH (150 ml) were added pyridine (5.7 ml, 0.071 mol) and NH2OH.HCl (4.91 g, 0.071 mol) at 0° C. The mixture was stirred at RT for 4 h. Solvent was distilled off and the mixture was treated with water and extracted with DCM. The organic layer was washed with water, dried, filtered and concentrated. Yield 8.1 g. 1H NMR (400 MHz; CDCl3): 3.97 (s, 4H), 2.58 (t, 2H), 1.93 (t, 2H), 1.12 (s, 6H).
To a solution of the compound of Example 194(b) (2.0 g, 0.014 mol) in EtOH (35 ml) was added Raney nickel (3.0 g). The mixture was stirred under hydrogen (1 atm) at RT for 16 h. The mixture was filtered through a Celite bed, washed with EtOH and the filtrate was concentrated under reduced pressure. The residue was purified by column chromatography over basic alumina. Yield 0.9 g. 1H NMR (400 MHz; DMSO-d6): 3.80 (bs, 4H), 2.86 (t, 1H), 1.71-1.90 (m, 2H), 1.57-1.65 (m, 1H), 1.21-1.32 (m, 1H), 0.81 (s, 3H), 0.76 (s, 3H); MS: m/z=172.10 [M+1]+.
The compound was prepared as in Example 137(c) from the compound of Example 194(c) (1.62 g, 9.46 mmol) and using 2.2 equivalent of DIPEA. Purification by flash chromatography afforded 2.33 g of the title compound. 1H NMR (400 MHz, CDCl3): 0.96 (3H, s), 1.06 (3H, s), 1.51 (1H, m), 1.92 (2H, m), 2.27 (1H, m), 3.69 (1H, m), 3.96 (4H, m), 4.95 (1H, d), 6.68 (1H, dd), 6.84 (1H, d), 7.52 (1H, d).
The compound was prepared as in Example 132(d) from the compound of Example 194(d) (1.16 g, 3.41 mmol). Extraction with DCM. Yield 1.06 g. 1H NMR (400 MHz, CDCl3): 0.82 (3H, s), 1.09 (3H, s), 1.17 (3H, t), 1.89 (2H, m), 2.00 (2H, m), 3.39 (1H, m), 3.65 (1H, m), 2.95 (4H, m), 4.28 (1H, t), 6.89 (1H, dd), 7.08 (1H, d), 7.54 (1H, d).
A solution of the compound of Example 194(e) (1.06 g, 2.68 mmol) and TsOH (0.127 g, 0.669 mmol) in acetone-water (12.5 ml-5 ml) was stirred at RT until the reaction was completed. The mixture was neutralized by saturated NaHCO3. Acetone was evaporated and the residue was diluted with water and extracted with DCM. The combined organic extracts were washed water and brine, dried, filtered and evaporated. Yield 0.886 g. 1H NMR (400 MHz, CDCl3): 0.96 (3H, s), 1.18 (3H, s), 1.22 (3H, t), 2.26 (1H, m), 2.26 (1H, m), 2.45-2.62 (2H, m), 3.32 (1H, m), 3.47 (1H, m), 4.37 (1H, t), 6.91 (1H, dd), 7.08 (1H, d), 7.59 (1H, d).
A solution of the compound of Example 194(f) (0.488 g, 1.505 mmol) and 1-tert-butoxy-N,N,N′,N′-tetramethylmethanediamine (1.5 ml, 7.26 mmol) in dry toluene (7.5 ml) was stirred at 70° C. temperature until the reaction was completed. Water and saturated NH4Cl were added to the cooled mixture which was extracted with ethyl acetate. The organic phase was washed water and brine, dried, filtered and evaporated to afford 0.649 g 4-((4-((dimethylamino)methylene)-2,2-dimethyl-3-oxocyclopentyl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile. This material was dissolved in dry DMF (7.5 ml) and treated with oxalyl chloride (0.40 ml, 4.59 mmol). The mixture was stirred at 70° C. until the reaction reached completion. The cooled mixture was diluted with water and saturated NH4Cl and extracted with TBME. The combined organic extracts were washed with water and brine, dried, filtered and evaporated to afford 0.440 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.05 (3H, s), 1.23 (3H, t), 1.36 (3H, s), 2.86 (1H, dd), 3.02 (1H, dd), 3.25-3.45 (2H, m), 4.52 (1H, dd), 6.87 (1H, dd), 7.04 (1H, d), 7.61 (1H, dd), 10.04 (1H, s).
The compound was prepared as in Example 183(b) from the compound of Example 194(g) (0.225 g, 0.607 mml) and ethylamine (0.50 ml, 1.00 mmol; 2 M in THF). Yield 0.162 g. 1H NMR (400 MHz, CDCl3): 1.04 (3H, s), 1.27 (3H, t), 1.35 (3H, s), 1.44 (3H, t), 2.87 (1H, dd), 3.15 (1H, dd), 3.49 (2H, m), 3.99 (2H, q), 4.56 (1H, dd), 6.90 (1H, dd), 7.08 (1H, d), 7.14 (1H, s), 7.56 (1H, s), 7.61 (1H, dd).
A mixture of tert-butyl (3-formylcyclopent-3-en-1-yl)carbamate (0.423 g, 2.00 mmol) and methylamine (2.5 ml, 5.0 mmol; 2 M in MeOH) in DCM (7.5 ml) was stirred at RT until all the aldehyde had reacted. Solvents were evaporated. The residue was dissolved in 1,2 dichloroethane (10 ml) and treated with tosylmethyl isocyanide (0.488 g, 2.50 mmol) and DBU (0.603 ml, 2.00 mmol). The mixture was stirred at 60° C. After the reaction was completed the mixture was cooled, diluted with DCM and washed with water and brine. Organic phase was dried, filtered and evaporated. Purification by flash chromatography afforded 0.249 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.45 (9H, s), 2.41 (1H, m), 2.54 (1H, m), 2.95 (1H, m), 3.07 (1H, m), 3.72 (3H, s), 4.37 (1H, br s), 4.81 (1H, br s), 5.81 (1H, m), 6.97 (1H, s), 7.39 (1H, s).
The compound was prepared as in Example 183(c) starting from the compound of Example 195(a) (0.249 g, 0.946 mmol). Yield 0.206 g. 1H NMR (400 MHz, DMSO-d6): 2.63 (1H, m), 2.69 (1H, m), 2.95 (1H, m), 3.07 (1H, m), 3.92 (3H, s), 3.94 (1H, m), 6.27 (1H, m), 7.72 (1H, d), 8.28 (3H, br s), 9.02 (1H, s).
The compound was prepared as in Example 183(d) starting from the compound of Example 195(b) (0.206 g, 0.872 mmol). Yield 0.132 g. 1H NMR (400 MHz, CDCl3): 2.53 (1H, m), 2.63 (1H, m), 3.10 (1H, m), 3.21 (1H, m), 3.75 (3H, s), 4.28 (1H, m), 4.98 (1H, d), 5.88 (1H, m), 6.71 (1H, dd), 6.88 (1H, d), 6.98 (1H, s), 7.42 (1H, s), 7.57 (1H, d).
The compound was prepared as in Example 183(e) starting from the compound of Example 195(c) (0.127 g, 0.382 mmol). Yield 0.116 g. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 2.70 (1H, m), 2.84 (1H, m), 3.00 (1H, m), 3.10 (1H, m), 3.46 (2H, q), 3.78 (3H, d), 4.67 (1H, m), 5.94 (1H, m), 6.80 (1H, dd), 6.99 (1H, d), 7.00 (1H, s), 7.44 (1H, s), 7.58 (1H, dd). The enantiomers of were separated using chiral preparative HPLC (Column: Daicel Chiralpak IA, 20 mm×250 mm, 5 μm particle size, eluent A: n-hexane+0.2% DEA, eluent B: EtOH+0.2% DEA, isocratic elution: 15% B, flow 20 ml/min, detection 300 nm) to afford 29 mg of enantiomer 1 (rt 21.3 min) and 28 mg of enantiomer 2 (rt 25 min).
The compound was prepared as in Example 183(b) starting from tert-butyl (3-formylcyclopent-3-en-1-yl)carbamate (0.528 g, 2.5 mmol), 2-(benzyloxy)ethanamine hydrochloride (0.563 g, 3.00 mmol), DIPEA (0.55 ml, 3.16 mmol), tosylmethyl isocyanide (0.635 g, 3.25 mmol) and DBU (0.75 ml, 5.02 mmol). Yield 0.669 g. LC-MS: m/z=384.38 (M+1)+.
The compound was prepared as in Example 187(b) starting from the compound of Example 196(a) (0.669 g, 1.745 mmol). Yield 0.325 g. 1H NMR (400 MHz, CDCl3): 2.26 (1H, m), 2.41 (1H, m), 2.82 (1H, m), 2.95 (1H, m), 3.71 (1H, m), 3.72 (2H, t), 4.23 (2H, t), 4.48 (2H, s), 5.64 (1H, m), 6.98 (1H, s), 7.23-7.35 (5H, m), 7.53 (1H, d).
The compound was prepared as in Example 187(c) starting from the compound of Example 196(b) (0.325 g, 1.147 mmol). Yield 0.233 g. 1H NMR (400 MHz, CDCl3): 2.46 (1H, m), 2.58 (1H, m), 3.01 (1H, m), 3.15 (1H, m), 3.72 (2H, t), 4.21 (1H, m), 4.23 (2H, t), 4.48 (2H, s), 5.07 (1H, d), 5.72 (1H, m), 6.68 (1H, dd), 6.84 (1H, d), 6.97 (1H, s), 7.2-7.34 (5H, m), 7.54 (2H, m).
The compound was prepared as in Example 183(e) starting from the compound of Example 196(c) (0.233 g, 0.515 mmol). Yield 0.146 g. 1H NMR (400 MHz, CDCl3): 1.21 (3H, t), 2.63 (1H, m), 2.93 (1H, m), 2.80 (1H, m), 3.05 (1H, m), 3.41 (2H, m), 3.75 (2H, t), 4.27 (2H, t), 4.51 (2H, s), 4.61 (1H, m), 5.79 (1H, m), 6.78 (1H, dd), 6.96 (1H, d), 7.01 (1H, s), 7.23 (2H, m), 7.28-7.36 (3H, m), 7.56 (1H, dd), 7.58 (1H, s).
A mixture of 4-iodo-2-(trifluoromethyl)benzonitrile (2.97 g, 10.0 mmol), 2-azabicyclo[2.2.1]hept-5-en-3-one (1.20 g, 11.0 mmol), N,N′-dimethylethylenediamine (0.16 ml, 1.50 mmol), copper iodide (0.143 g, 0.750 mmol) and potassium phosphate (4.25 g, 20.0 mmol) in dry toluene (12.5 ml) was stirred at 110° C. After the reaction was completed the cooled mixture was filtered. The filter cake was washed with toluene and the filtrate was evaporated. Purification by flash chromatography afforded 1.872 g of the title compound. 1H NMR (400 MHz, CDCl3): 2.39 (1H, dt), 2.50 (1H, dt), 3.58 (1H, m), 4.93 (1H, m), 6.76 (1H, m), 7.04 (1H, ddd), 7.77 (2H, m), 7.88 (1H, m).
Sodium borohydride (0.509 g, 13.45 mmol) was stepwise added to a cooled solution of the compound of Example 197(a) (1.871 g, 6.72 mmol) in MeOH (30 ml). The mixture was stirred at RT until all starting material was consumed. Most of the methanol was evaporated, water and DCM was added. Aqueous phase was extracted with DCM. Combined organic extracts were washed with water and brine, dried, filtered and evaporated. Purification by flash chromatography afforded 1.517 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.54 (1H, dt), 1.56 (1H, br s), 2.58 (1H, m), 2.96 (1H, m), 3.62 (1H, dd), 3.71 (1H, dd), 4.57 (1H, m), 4.91 (1H, br s), 5.92 (2H, m), 6.70 (1H, dd), 6.86 (1H, d), 7.53 (1H, dd).
The compound was prepared as in Example 183(a) starting from the compound of Example 197(b) (1.503 g, 5.32 mmol). Yield 0.658 g. 1H NMR (400 MHz, CDCl3): 2.53 (1H, m), 2.59 (1H, m), 3.08 (1H, m), 3.17 (1H, m), 4.33 (1H, m), 4.61 (1H, m), 6.69 (1H, dd), 6.86 (2H, m), 7.58 (1H, d), 9.80 (1H, s). LC-MS: m/z=281.14 (M+1)+.
The compound was prepared as in Example 183(b) starting from the compound of Example 197(c) (0.366 g, 1.306 mmol) and 2-phenyl-1,3-dioxan-5-amine (Bioorg. Med. Chem. 2006, 14, 2850) (0.293 g, 1.632 mmol). Yield 0.228 g. 1H NMR (400 MHz, CDCl3): 2.52 (1H, m), 2.67 (1H, m), 3.10 (1H, m), 3.25 (1H, m), 4.29 (1H, m), 4.34 (1H, m), 4.43 (4H, m), 4.68 (1H, d), 5.53 (1H, m), 5.68 (1H, s), 6.71 (1H, dd), 6.87 (1H, d), 7.07 (1H, s), 7.40 (3H, m), 7.51 (2H, m), 7.59 (1H, d), 8.43 (1H, d).
The compound was prepared as in Example 137(d) starting from the compound of Example 197(d) (0.228 g, 0.475 mmol). Extracted with DCM. Purification by flash chromatography afforded 0.163 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 2.69 (1H, m), 2.88 (1H, m), 2.99 (1H, m), 3.11 (1H, m), 3.47 (2H, q), 4.36 (1H, m), 4.40-4.50 (4H, m), 4.67 (1H, m), 5.60 (1H, m), 5.70 (1H, s), 6.81 (1H, dd), 6.97 (1H, d), 7.07 (1H, s), 7.40 (3H, m), 7.52 (2H, m), 7.59 (1H, dd), 8.45 (1H, d).
A solution of the compound of Example 197(e) (0.163 g, 0.321 mmol) in methanol (2 ml) was treated with 37% aqueous HCl (0.133 ml, 1.603 mmol) and stirred overnight at RT. The mixture was concentrated, diluted with water and neutralized with saturated NaHCO3. The aqueous phase was extracted with DCM. Combined organic extracts were washed with brine, dried, filtered and evaporated. Purification by flash chromatography afforded 70 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 2.70 (1H, m), 2.81 (1H, m), 2.93-3.10 (2H, m), 3.47 (2H, q), 4.07 (4H, m), 4.55 (1H, m), 4.65 (1H, m), 5.92 (1H, m), 6.79 (1H, dd), 6.91 (1H, s), 6.96 (1H, d), 7.58 (1H, d), 7.74 (1H, s). LC-MS: m/z=421.73 (M+1)+.
A solution of 2-(2-aminoethoxy)ethanol (2.5 ml, 24.92 mkol) in dry THF (27 ml) was treated with NaH (1.0 g, 25.0 mmol; 60 wt-% in mineral oil). The mixture was refluxed for 30 min and then 4-methoxybenzyl chloride (3.0 ml, 22.13 mmol) was added. Rexluxing was continued for 5 h. The cooled mixture was treated with water and THF was evaporated. The residue was treated with 1M HCl and washed with DCM. The aqueous phase was made alkaline with 2M NaOH and extracted with DCM. Combined organic phases were dried, filtered and evaporated to afford 2.51 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.69 (2H, br s), 2.85 (2H, t), 3.50 (2H, t), 3.62 (4H, m), 3.80 (3H, s), 4.50 (2H, s), 6.88 (2H, m), 7.27 (2H, m).
The compound was prepared as in Example 183(b) from 4-((3-formylcyclopent-3-en-1-yl)amino)-2-(trifluoromethyl)benzonitrile (0.358 g, 1.277 mmol) and the compound of Example 198(a) (0.36 g, 1.597 mmol). Yield 0.546 g. 1H NMR (400 MHz, CDCl3): 2.46 (1H, m), 2.61 (1H, m), 3.05 (1H, m), 3.19 (1H, m), 3.54-3.60 (5H, m), 3.76-3.81 (2H, m), 3.80 (3H, s), 4.22 (2H, dt), 4.45 (2H, s), 4.77 (1H, d), 5.77 (1H, m), 6.68 (1H, dd), 6.85 (1H, d), 6.86 (2H, m), 6.99 (1H, m), 7.23 (1H, m), 7.56 (1H, m).
The compound was prepared as in Example 137(d) from the compound of Example 198(b) (0.546 g, 1.037 mmol). Extracted with DCM. Yield 0.37 g after flash chromatography. 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 2.67 (1H, m), 2.83 (1H, m), 2.95 (1H, m), 3.08 (1H, m), 3.44 (2H, q), 3.558 (2H, m), 3.61 (2H, m), 3.78-3.81 (2H, m), 3.80 (3H, s), 4.25 (2H, t), 4.47 (2H, s), 4.63 (1H, m), 5.84 (1H, m), 6.79 (1H, m), 6.87 (2H, m), 6.97 (1H, d), 7.00 (1H, s), 7.25 (2H, m), 7.57 (2H, m).
A solution of the compound of Example 198(c) (0.139 g, 0.25 mmol) in acetonitrile (1.5 ml) was treated with triphenylphosphine hydrobromide (0.094 g, 0.275 mmol) and reacted for 1 h at 100° C. in a microwave synthesizer (Biotage Initiator). Solvent was evaporated. The residue was diluted with DCM, washed with saturated NaHCO3, water and brine. Organic phase was dried, filtered and evaporated. Purification by flash chromatography afforded 21 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 2.69 (1H, m), 2.85 (1H, m), 2.99 (1H, m), 3.10 (1H, m), 3.46 (2H, q), 3.49 (1H, s), 3.56 (2H, m), 3.72 (2H, m), 3.81 (2H, t), 4.28 (2H, t), 4.67 (1H, m), 5.86 (1H, m), 6.81 (1H, dd), 6.98 (1H, d), 7.01 (1H, s), 7.58 (1H, d), 7.59 (1H, dd).
The compound was prepared as in Example 183(b) from tert-butyl (3-formylcyclopent-3-en-1-yl)carbamate (0.634 g, 3.0 mmol) and 1-amino-2-methylpropan-2-ol (0.40 g, 4.49 mmol). Yield 0.446 g. 1H NMR (400 MHz, CDCl3): 1.22 (3H, s), 1.23 (3H, s), 1.45 (9H, s), 2.39 (1H, m), 2.54 (1H, m), 2.92 (1H, m), 3.05 (1H, m), 4.03 (2H, s), 4.35 (1H, br s), 4.81 (1H, br s), 5.84 (1H, m), 6.97 (1H, d), 7.57 (1H, d).
The compound was prepared as in Example 183(c) from the compound of Example 199(a) (0.446 g, 1.388 mmol). Yield 0.447 g. 1H NMR (400 MHz, DMSO-d6): 1.10 (3H, s), 1.13 (3H, s), 2.63 (1H, m), 2.73 (1H, m), 2.92 (1H, m), 3.05 (1H, m), 3.93 (1H, m), 4.21 (1H, m), 6.29 (1H, m), 7.76 (1H, d), 8.35 (3H, br s), 9.04 (1H, d), 14.8 (1H, br s).
The compound was prepared as in Example 183(d) from the compound of Example 199(b) (0.447 g, 1.383 mmol). Yield 0.243 g. 1H NMR (400 MHz, CDCl3): 1.22 (3H, s), 1.23 (3H, s), 2.50 (1H, m), 2.61 (1H, m), 3.02 (1H, m), 3.13 (1H, m), 4.02 (2H, m), 4.24 (1H, m), 5.48 (1H, d), 5.89 (1H, m), 6.69 (1H, dd), 6.86 (1H, d), 6.88 (1H, d), 7.52 (1H, d), 7.53 (1H, d).
The compound was prepared as in Example 137(d) from the compound of Example 199(c) (0.193 g, 0.494 mmol). Extracted with DCM. Yield 40.8 mg after preparative HPLC. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.26 (3H, s), 1.28 (3H, s), 1.74 (1H, br s), 2.68 (1H, m), 2.84 (1H, m), 2.97 (1H, m), 3.09 (1H, m), 3.46 (2H, q), 4.07 (2H, s), 4.65 (1H, m), 5.99 (1H, m), 6.80 (1H, dd), 6.98 (1H, d), 7.01 (1H, br s), 7.57 (1H, dd), 7.61 (1H, d).
The compound was prepared as in Example 183(b) from tert-butyl (3-formylcyclopent-3-en-1-yl)carbamate (0.634 g, 3.0 mmol) and ethylamine (3.0 ml, 6.0 mmol; 2M in THF). Yield 0.674 g. 1H NMR (400 MHz, CDCl3): 1.44 (3H, t), 1.46 (9H, s), 2.41 (1H, m), 2.55 (1H, m), 2.96 (1H, m), 3.08 (1H, m), 4.08 (2H, q), 4.37 (1H, br s), 4.76 (1H, br s), 5.75 (1H, m), 6.98 (1H, br s), 7.46 (1H, d)
The compound was prepared as in Example 183(c) from the compound of Example 200(a) (0.674 g, 2.43 mmol). Yield 0.59 g. 1H NMR (400 MHz, DMSO-d6): 1.44 (3H, t), 2.65 (1H, m), 2.72 (1H, m), 2.96 (1H, m), 3.08 (1H, m), 3.95 (1H, m), 4.32 (2H, q), 6.24 (1H, m), 7.79 (1H, d), 8.33 (3H, br s), 9.18 (1H, d), 14.8 (1H, br s).
The compound was prepared as in Example 183(d) from the compound of Example 200(b) (0.59 g, 2.358 mmol). Yield 0.354 g. 1H NMR (400 MHz, CDCl3): 1.46 (3H, t), 2.52 (1H, m), 2.65 (1H, m), 3.11 (1H, m), 3.23 (1H, m), 4.11 (2H, q), 4.29 (1H, m), 4.67 (1H, d), 5.81 (1H, m), 6.71 (1H, dd), 6.87 (1H, d), 7.01 (1H, br s), 7.50 (1H, d), 7.58 (1H, d).
The compound was prepared as in Example 137(d) from the compound of Example 200(c) (0.15 g, 0.433 mmol) and 2-(2-bromoethoxy)tetrahydro-2H-pyran (94 μl, 0.622 mmol). Extracted with DCM. Yield 39 mg after flash chromatography. 1H NMR (400 MHz, CDCl3): 1.43 (3H, t), 1.53 (4H, m), 1.72 (2H, m), 2.75 (1H, m), 2.92 (1H, m), 3.01 (1H, m), 3.11 (1H, m), 3.49 (1H, m), 3.59 (1H, m), 3.65 (2H, m), 3.77 (1H, m), 3.91 (1H, m), 4.14 (2H, q), 4.57 (1H, m), 4.69 (1H, m), 5.89 (1H, m), 6.88 (1H, dd), 7.01 (1H, d), 7.12 (1H, d), 7.57 (1H, d), 7.59 (1H, s).
A solution of the compound of Example 200(d) (39 mg, 0.082 mmol) in MeOH (2 ml) was treated with TsOH (19 mg, 0.099 mmol) and stirred at 50° C. until the reaction was completed. MeOH was evaporated and the residue was diluted with DCM. Saturated NaHCO3 was added. Aqueous phase was extracted with DCM. Combined organic extracts were dried, filtered and evaporated. Purification by preparative HPLC afforded 16 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.47 (3H, t), 1.62 (1H, br s), 2.76 (1H, m), 2.90 (1H, m), 3.01 (1H, m), 3.10 (1H, m), 3.60 (2H, m), 3.84 (2H, t), 4.11 (2H, q), 4.69 (1H, m), 5.87 (1H, m), 6.88 (1H, dd), 6.92 (1H, br s), 7.06 (1H, d), 7.44 (1H, d), 7.56 81H dd).
The compound was prepared as in Example 183(b) from the compound of Example 197(c) (0.28 g, 1.00 mmol) and 2-(2-(tert-butyldimethylsilyloxy)ethoxy)ethanamine (0.263 g, 1.2 mmol) (J. Am. Chem. Soc., 2000, 122, 5905). Yield 0.348 g. 1H NMR (400 MHz, CDCl3): 0.05 (6H, s), 0.89 (9H, s), 2.50 (1H, m), 2.63 (1H, m), 3.09 (1H, m), 3.22 (1H, m), 3.51 (1H, m), 3.73 (2H, t), 3.79 (2H, t), 4.21 (2H, t), 4.27 (1H, m), 4.74 (1H, d), 5.77 (1H, m), 6.71 (1H, dd), 6.87 (1H, d), 6.99 (1H, s), 7.57 (1H, s), 7.58 (1H, d).
The compound was prepared as in Example 137(d) starting from the compound of Example 201(a) (0.174 g, 0.334 mmol). Extracted with DCM. Yield 0.135 g after flash chromatography. 1H NMR (400 MHz, CDCl3): 0.06 (6H, s), 0.90 (9H, s), 1.24 (3H, t), 2.68 (1H, m), 2.84 (1H, m), 2.98 (1H, m), 3.09 (1H, m), 3.46 (2H, q), 3.52 (2H, t), 3.74 (2H, t), 3.81 (2H, t), 4.24 (2H, t), 4.66 (1H, m), 5.84 (1H, m), 6.81 (1H, dd), 6.98 (1H, d), 7.00 (1H, s), 7.58 (1H, dd), 7.59 (1H, s).
A solution of the compound of Example 201(b) (0.135 g, 0.23 mmol) in MeOH (2 ml) was treated with ammonium fluoride (0.085 g, 2.295 mmol) and stirred at 50° C. until the reaction was completed. MeOH was evaporated and the residue was diluted with DCM. Water was added and aqueous phase was extracted with DCM. Combined organic extracts were washed with water and brine, dried, filtered and evaporated to afford 74 mg of the title compound. 1H NMR was identical with the compound of Example 198. The enantiomers of were separated using chiral preparative HPLC (Column: Daicel Chiralpak IA, 20 mm×250 mm, 5 m particle size, eluent A: n-hexane+0.2% DEA, eluent B: EtOH+0.2% DEA, isocratic elution: 20% B, flow 20 ml/min, detection 300 nm) to afford 21.8 mg of enantiomer 1 (rt 19 min) and 21.2 mg of enantiomer 2 (rt 25.5 min).
The compound was prepared as in Example 183(b) from tert-butyl (3-formylcyclopent-3-en-1-yl)carbamate (0.528 g, 2.5 mmol) and 2-(2-methoxyethoxy)ethanamine (0.357 g, 3.0 mmol). Yield 0.257 g. 1H NMR (400 MHz, CDCl3): 1.45 (9H, s), 2.40 (1H, m), 2.54 (1H, m), 2.94 (1H, m), 3.07 (1H, m), 3.36 (3H, s), 3.51 (2H, m), 3.57 (2H, m), 3.75 (2H, t), 4.21 (2H, t), 4.36 (1H, br s), 4.77 (1H, br s), 5.71 (1H, m), 6.97 (1H, d), 7.54 (1H, d).
The compound was prepared as in Example 183(c) from the compound of Example 202(a) (0.257 g, 0.731 mmol). Yield 0.259 g. 1H NMR (400 MHz, DMSO-d6): 2.64 (1H, m), 2.72 (1H, m), 2.94 (1H, m), 3.08 (1H, m), 3.21 (3H, s), 3.40 (2H, m), 3.55 (2H, m), 3.75-3.85 (2H, m), 3.94 (1H, m), 4.47 (2H, t), 6.25 (1H, m), 7.80 (1H, d), 8.37 (3H, br s), 9.11 (1H, d), 14.8 (1H, br s).
The compound was prepared as in Example 183(d) from the compound of Example 202(b) (0.259 g, 0.731 mmol). Yield 94 mg. 1H NMR (400 MHz, CDCl3): 2.52 (1H, m), 2.64 (1H, m), 3.07 (1H, m), 3.20 (1H, m), 3.36 (3H, s), 3.50 (2H, m), 3.57 (2H, m), 3.77 (2H, t), 4.23 (2H, t), 4.27 (1H, m), 5.24 (1H, d), 5.78 (1H, m), 6.71 (1H, dd), 6.88 (1H, d), 6.97 (1H br s), 7.55 (1H, d), 7.56 (1H, d).
The compound was prepared as in Example 137(d) from the compound of Example 202(c) (94 mg, 0.224 mmol). Extracted with DCM. Yield 21 mg after preparative HPLC. 1H NMR (400 MHz, CDCl3): 1.24 (3H, t), 2.69 (1H, m), 2.84 (1H, m), 2.98 (1H, m), 3.10 (1H, m), 3.37 (3H, s), 3.46 (2H, q), 352 (2H, m), 3.59 (2H, m), 3.80 (2H, t), 4.26 (2H, t), 4.66 (1H, m), 5.85 (1H, m), 6.81 (1H, dd), 6.98 (1H, d), 7.00 (1H br s), 7.58 (1H, dd), 7.59 (1H, br s).
The compound was prepared as in Example 131(a) starting from 6-fluoro-2-methyl-3-nitropyridine and the compound of Example 96(e). Yield 36%. 1H NMR (400 MHz, CDCl3): 1.02 (3H, s), 1.10 (3H, s), 1.77 (2H, t), 2.55 (2H, m), 2.78 (3H, s), about 4.7 (1H, broad s), 5.08 (1H, m), 5.67-5.68 (1H, m), 6.32 (1H, d), 7.09 (1H, s), 7.12 (1H, s), 7.70 (1H, s), 8.21 (1H, d).
The compound was prepared as in Example 130 starting from the compound of Example 203(a). After the addition of iodomethane the mixture was maintained at 0° C. for 1 h 15 min. The product was purified by flash chromatography (eluent: 0-1% MeOH/DCM) and then trituration in DCM afforded the title product. Yield 45%. 1H NMR (400 MHz, CDCl3): 0.93 (3H, s), 1.08 (3H, s), 1.70-1.81 (1H, m), 2.51-2.59 (1H, m), 2.62-2.70 (1H, m), 2.80 (3H, s), 3.01 (3H, s), 5.63-5.64 (1H, m), 5.88-5.95 (1H, m), 6.40 (1H, d), 7.12 (1H, s), 7.17 (1H, s), 7.76 (1H, s), 8.28 (1H, d). The enantiomers (45 mg) were separated by preparative chiral HPLC (Column Chiralpak IC 20 mm×250 mm 5 m, A MTBE+0.2% DEA, B EtOH+0.2% DEA, isocratic B 10%, flow 20 ml/min, λ 300 nm) to yield 5.3 mg of enantiomer 1 (rt 23.4 min) and 5.6 mg of enantiomer 2 (rt 27.1 min). The 1H NMR spectra of enantiomers were identical with the spectrum of the racemate.
The compound was prepared as in Example 131(a) starting from 3-chloro-5-fluoropicolinonitrile and the compound of Example 96(e). The reaction mixture was heated at 100° C. for 1 h 30 min. The crude product was crystallized in DCM to afford the title product. Yield 58%. 1H NMR (400 MHz, CDCl3): 1.04 (3H, s), 1.13 (3H, s), 1.72-1.84 (2H, m), 2.49-2.61 (2H, m), 3.95 (1H, m), 4.55 (1H, d), 5.61-5.63 (1H, m), 6.95 (1H, d), 7.10 (1H, s), 7.12 (1H, s), 7.69 (1H, s), 8.00 (1H, d).
The compound was prepared as in Example 203(b) starting from the compound of Example 204(a). The product was purified by flash chromatography (eluent: 0-1% MeOH/DCM) to afford the title compound. Yield 46%. 1H NMR (400 MHz, CDCl3): 0.99 (3H, s), 1.12 (3H, s), 1.73-1.84 (2H, m), 2.52-2.61 (1H, m), 2.64-2.72 (1H, m), 2.97 (3H, s), 4.51-4.52 (1H, m), 5.61-5.63 (1H, m), 7.05 (1H, d), 7.14 (1H, s), 7.17 (1H, s), 7.76 (1H, s), 8.23 (1H, d).
The compound was prepared as in Example 131(a) starting from 3,5-difluoropicolinonitrile and the compound of Example 96(e). The mixture was heated at 100° C. for 1 h. The crude product was purified by flash chromatography (eluent: 0-3% MeOH/DCM) to afford the title product. 1H NMR (400 MHz, CDCl3): 1.04 (3H, s), 1.12 (3H, s), 1.69-1.84 (2H, m), 2.49-2.60 (2H, m), 3.92 (1H, m), 4.81 (1H, d), 5.62-5.63 (1H, m), 6.67 (1H, dd), 7.09 (1H, s), 7.12 (1H, s), 7.68 (1H, s), 8.00 (1H, dd).
The compound was prepared as in Example 203(b) starting from the compound of Example 205(a). The product was purified by flash chromatography (eluent: 0-3% MeOH/DCM) to afford the title product. 1H NMR (400 MHz, CDCl3): 0.99 (3H, s), 1.12 (3H, s), 1.72-1.85 (2H, m), 2.52-2.61 (1H, m), 2.65-2.73 (1H, m), 2.98 (3H, s), 4.51 (1H, m), 5.64 (1H, m), 6.77 (1H, dd), 7.14 (1H, s), 7.18 (1H, s), 7.78 (1H, s), 8.16 (1H, dd).
To a solution of 4-((3-(1H-imidazol-5-yl)cyclohex-3-en-1-yl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile (250 mg, 0.694 mmol) in EtOH (10 ml) was added Pd—C (25 mg). The mixture was kept under H2 pressure (1 bar) at RT for 4 h, filtered through celite and concentrated to give the title compound as a mixture of diasteromers. Yield 107 mg. The racemic mixture of the title compound (30 mg) was purified by chiral HPLC chromatography (Chiralpak IA 20 mm×250 mm column, n-hexane/ethanol/0.1% DEA, 1 ml/min) to yield 5.7 mg of enantiomer 1 (rt 5.9 min) and 2.4 mg of enantiomer 2 of trans-diastereomer (rt 6.5 min), 1H NMR (400 MHz, CDCl3): 1.21 (t, 3H), 1.58-1.87 (m, 6H), 2.09-2.15 (m, 1H), 2.34 (d, 1H), 3.25-3.50 (m, 3H), 3.99-4.08 (m, 1H), 6.78 (dd, 1H), 6.87 (s, 1H), 7.11 (br. s., 1H), 7.51 (d, 1H), 7.66 (d, 1H), and 4.4 mg of enantiomer 1 (rt 9.5 min) and 5.6 mg of enantiomer 2 of cis-diastereomer (rt 10.8 min), 1H NMR (400 MHz, CDCl3): 1.20 (t, 3H), 1.40-1.62 (m, 3H), 1.69 (q, 1H), 1.90 (d, 1H), 1.98-2.11 (m, 2H), 2.17 (d, 1H), 2.77-2.86 (m, 1H), 3.34-3.46 (m, 2H), 3.78-3.86 (m, 1H), 6.76-6.82 (m, 2H), 6.95 (d, 1H), 7.53-7.60 (m, 2H). All compounds had LC-MS MS: m/z 362[M+H].
To a stirred solution of 4-((3-(1H-imidazol-5-yl)cyclohex-3-en-1-yl)(ethyl)amino)-2-(trifluoromethyl)benzonitrile (200 mg, 0.555 mmol) in toluene (5 ml) was added TBABr (0.055 mmol) and 50% NaOH solution (1.17 ml). The mixture was heated to 40° C. and iodomethane (95 mg, 0.666 mmol) was added. After stirring 3 h at 40° C. the mixture was cooled to RT and stirred overnight. The organic layer was washed twice with water and brine, dried and evaporated. The crude product was purified by flash chromatography (DCM:MeOH 98:2) to give 12.5 mg of 1,4-isomer, 1H NMR (400 MHz, CDCl3): 1.26 (t, 3H), 1.82-2.04 (m, 2H), 2.36-2.52 (m, 3H), 2.54-2.65 (m, 1H), 3.35-3.55 (m, 2H), 3.65 (s, 3H), 4.06-4.17 (m, 1H), 6.42 (br. s., 1H), 6.77 (s, 1H), 6.84 (dd, 1H), 7.00 (d, 1H), 7.37 (s, 1H), 7.56 (d, 1H), and 18 mg of 1,5-isomer, 1H NMR (400 MHz, CDCl3): 1.26 (t, 3H), 1.82-1.94 (m, 1H), 1.95-2.03 (m, 1H), 2.43-2.56 (m, 4H), 3.38-3.51 (m, 2H), 3.67 (s, 3H), 4.05-4.16 (m, 1H), 5.90 (br. s., 1H), 6.85 (dd, 1H), 6.93 (s, 1H), 7.00 (d, 1H), 7.39 (s, 1H), 7.59 (d, 1H).
To a stirred solution of the compound of Example 117 (200 mg, 0.555 mmol) in toluene (5 ml) was added TBABr (0.055 mmol) and 50% NaOH solution (1.17 ml). The mixture was heated to 40° C. and iodoethane (91 mg, 0.583 mmol) was added. After stirring for 3 h at 40° C. the mixture was cooled to RT. The organic layer was washed with water and brine, dried and evaporated. The crude product was purified by flash chromatography (DCM:MeOH 98:2) to give 85.5 mg of 1,4 isomer, 1H NMR (400 MHz, CDCl3): 1.27 (t, 3H), 1.44 (t, 3H), 1.83-2.02 (m, 2H), 2.40-2.51 (m, 3H), 2.55-2.65 (m, 1H), 3.36-3.53 (m, 2H), 3.95 (q, 2H), 4.06-4.16 (m, 1H), 6.43 (m, 1H), 6.79-6.82 (m, 1H), 6.85 (dd, 1H), 7.00 (d, 1H), 7.42 (d, 1H), 7.56 (d, 1H), and 12.7 mg the 1,5-isomer, 1H NMR (400 MHz, CDCl3): 1.26 (t, 3H), 1.44 (t, 3H), 1.82-2.03 (m, 2H), 2.45-2.51 (m, 3H), 3.36-3.52 (m, 2H), 4.00 (q, 2H), 4.05-4.15 (m, 1H), 5.85 (m, 1H), 6.85 (dd, 1H), 6.91 (s, 1H), 6.99 (d, 1H), 7.46 (s, 1H), 7.59 (d, 1H).
3-(1H-1,2,4-triazol-1-yl)cyclohexanone (5.6 g, 33.9 mmol) was dissolved into dry pyridine (20 ml). Solid hydroxylamine HCl (2.47 g, 35.6 mmol) was added and the mixture was stirred at RT for 4 h. Pyridine was evaporated and the residue was dissolved to ethyl acetate (30 ml). The organic layer was washed with water, dried and evaporated to give 2.3 g white solid. More oxime was precipitated from water phase 2.2 g to yield 4.5 g of combined solids which was used as such in the next step. LC-MS MS: m/z 181[M+H].
The compound of Example 209(a) (4.5 g, 25 mmol) was reduced with LiAlH4 (1.42 g, 37.5 mmol) in dry THF (100 ml) as in Example 86(b) to yield 2.45 g of the title compound as a 2:1 mixture of cis:trans diastereomers and it was used as such in the next step.
A mixture of 4-fluoro-(2-trifluoromethyl)benzonitrile (0.57 g, 3.01 mmol), the compound of Example 209(b) (0.50 g, 3.01 mmol), DIPEA (1.57 ml, 9.02 mmol) and DMSO (10 ml) was heated to 80° C. for 2 h. The aqueous work up afforded 0.67 g of tile compound as a 3:2 mixture of cis:trans diastereomers. The mixture was used as such in the next step.
The compound of Example 209(c) (658 mg, 1.96 mmol) was ethylated as in Example 130. The crude product was purified by flash chromatography using DCM acetone (5-10%) gradient to give 108 mg of cis-diastereomer, 1H NMR (400 MHz, CDCl3): 1.22 (t, 3H), 1.60-1.66 (m, 2H), 1.87 (qd, 1H), 1.92-2.00 (m, 1H), 2.06-2.15 (m, 2H), 2.22 (m, 1H), 2.32 (m, 1H), 3.43 (q, 2H), 3.82-3.92 (m, 1H), 4.39 (m, 1H), 6.82 (dd, 1H), 6.96 (d, 1H), 7.59 (d, 1H), 7.95 (s, 1H), 8.12 (s, 1H), and 53.9 mg of trans-diastereomer, 1H NMR (400 MHz, CDCl3): 1.24 (t, 3H), 1.63-1.82 (m, 2H), 1.82-1.95 (m, 3H), 1.95-2.08 (m, 1H), 2.09-2.26 (m, 1H), 2.49 (d, 1H), 3.28-3.55 (m, 2H), 4.43-4.58 (m, 1H), 4.78 (br. s., 1H), 6.86 (d, 1H), 7.31 (br. s., 1H), 7.56 (d, 1H), 8.04 (s, 1H), 8.17 (s, 1H). The enantiomers of cis-diastereomer (80 mg) were purified by chiral HPLC chromatography (Chiralpak IA 20 mm×250 mm column, n-hexane/ethanol/0.1% DEA, 20 ml/min) to yield enantiomer 1 (rt 1 min) and enantiomer 2 (rt 2 min).
3-Chlorocyclohex-2-enone (1.5 g, 11.5 mmol) and 1,2,4-triazole sodium salt (1.26 g, 13.8 mmol) were dissolved into dry DMF (15 ml). The mixture was stirred at 80° C. for 5 h. Water was added, and the mixture was extracted with ethyl acetate and with DCM. The combined organic phases were washed with water and brine, dried and evaporated to yield 1.6 g of the title compound. LC-MS MS: m/z 164[M+H]. This material was used as such in the next step.
The compound was prepared using the compound of Example 210(a) (1.6 g, 10 mmol), CeCl3 heptahydrate (4.1 g, 11 mmol) and NaHB4 (0.45 g, 12 mml) in MeOH (20 ml). Yield 1.05 g. LC-MS MS: m/z 166[M+H]. This material was used as such in the next step.
The compound was prepared using the compound of Example 210(b) (0.82 g, 4.9 mmol), DPPA (2.0 g, 7.4 mmol) and DBU (1.3 ml) by stirring in toluene (12 ml) overnight at RT as described in Example 74(d). Yield 0.58 g. LC-MS MS: m/z 191 [M+H]. This material was used as such in the next step.
The compound was prepared as in Example 74(e) using the compound of Example 210(c) (0.35 g, 1.8 mmol), polymer supported PPh3 (2 equivalent) in MeOH (20 ml). After 3 h at 65° C. the polymer was filtered off and the reaction repeated. The polymer was filtered and washed with MeOH. The solvent was evaporated to dryness. The residue was dissolved to EtOAc and 3-(1H-1,2,4-triazol-1-yl)cyclohex-2-enamine was converted to HCl salt by addition of HCl ether solution. After filtration 0.19 g of the title compound was obtained. LC-MS MS: m/z 165[M+H]. This material was used as such in the next step.
The compound was prepared from the compound of Example 210(d) (0.19 g, 0.96 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.18 g, 0.96 mmol) and DIPEA (0.5 ml, 2.9 mmol) in DMSO (5 ml), 3 h, 80° C. Yield 0.11 g. LC-MS MS: m/z=334, (M+1)+.
The compound of Example 210(e) (54 mg, 0.16 mmol) was N-alkylated using 60% NaH dispersion (51 mg, 0.32 mmol) and iodoethane (16 mg, 0.41 mmol) in DMF (3 ml), 3 h, yielding 54 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.25 (t, 3H), 1.69-1.83 (m, 1H), 1.87-2.02 (m, 1H), 2.03-2.22 (m, 2H), 2.66-2.74 (m, 2H), 3.35-3.53 (m, 2H), 4.66-4.74 (m, 1H), 6.26 (br. s., 1H), 6.86 (dd, 1H), 7.00-7.04 (m, 1H), 7.60 (d, 1H), 8.01 (s, 1H), 8.29 (s, 1H).
3-(1H-1,2,4-triazol-1-yl)cyclopentanone (3.9 g, 25.8 mmol) was dissolved to dry pyridine (15). Hydroxylamine HCl (1.9 g, 27.1 mmol) was added and the mixture was stirred at RT for 4 h. The precipitate was filtered off and the white solid was washed with ether to yield 3.8 g of the title compound. The structure was confirmed with LC-MS. This material used as such in the next step. m/z=167 (M+1)+
A mixture of the compound of Example 211(a) (3.8 g, 22.8 mmol) and THF (80 ml) was cooled to 0° C. Solid LiAlH4 (1.3 g, 34.1 mmol) was added in small portions and the mixture that was warmed to RT and then refluxed for 4 h. Small portion of water (1.5 ml) was added the mixture was stirred for 15 min. Another 4.5 ml of water and 3 ml of 2 M NaOH was added and the mixture was stirred at RT overnight, filtered through celite pad and washed with THF. The filtrate was evaporated to give 1.5 g of the title compound as an oil. This material was used as such in next step.
The compound was prepared from the compound of Example 211(b) (1.48 g, 7.84 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (1.48 g, 7.84 mmol) and DIPEA (4.1 ml, 23.5 mmol) in DMSO (10 ml). The mixture was stirred for 2 h in 80° C. yielding 0.49 g of cis-diastereomer and 0.69 g of trans-diastereomer after column chromatography. Both diastereomers had LC-MS m/z=322, (M+1)+.
Trans-diastereomer of Example 211(c) (0.69 g, 2.15 mmol) was alkylated using 60% NaH dispersion (0.22 mg, 5.37 mmol) and iodoethane (0.67 mg, 4.30 mmol) in DMF (12 ml), 2 h, to yield 0.73 g of the trans-diastereomer of the title compound, 1H NMR (400 MHz, CDCl3): 1.25 (t, 3H), 1.86 (m, 1H), 2.04-2.18 (m, 2H), 2.25-2.35 (m, 1H), 2.39 (m, 1H), 2.48 (m, 1H), 3.42 (m, 2H), 4.79 (m, 1H), 4.93 (m, 1H), 6.89 (dd, 1H), 7.08 (d, 1H), 7.59 (d, 1H), 7.99 (s, 1H), 8.11 (s, 1H). Cis-diastereomer of Example 212(c) (0.49 g, 1.53 mmol) was alkylated using 60% NaH dispersion (0.15 mg, 3.81 mmol) and iodoethane (0.47 mg, 3.05 mmol) in DMF (10 ml), 2 h, to yield 0.25 g of the cis-diastereomer of the title compound, 1H NMR (400 MHz, CDCl3): 1.23-1.29 (m, 3H), 2.16-2.30 (m, 5H), 2.57-2.66 (m, 1H), 3.46-3.61 (m, 2H), 4.26-4.36 (m, 1H), 4.79-4.88 (m, 1H), 6.85 (dd, 1H), 7.01 (d, 1H), 7.59 (d, 1H), 7.98 (s, 1H), 8.11 (s, 1H). The two enantiomers of cis-diastereomer (150 mg) were purified by chiral HPLC chromatography (Chiralpak IA 20 mm×250 mm column, n-hexane/ethanol/0.1% DEA, 1 ml/min) to yield enantiomer 1 (rt 4.28 min) and enantiomer 2 (rt 4.66 min). The two enantiomers of trans-diastereomer (150 mg) were purified similarly to yield enantiomer 1 (rt 4.13 min) and enantiomer 2 (rt 4.38 min).
4-((3-Aminocyclohexyl)amino)-2-(trifluoromethyl)benzonitrile (200 mg, 0.706 mmol) was dissolved into toluene (10 ml). N,N′-Bis(dimethylaminomethylene)hydrazine (120 mg, 0.847 mmol) and PPTS (18 mg, 0.072 mmol) was added and the mixture was heated to reflux for 8 h. During the reflux brown oil was formed. The crude product was purified by flash chromatography using DCM methanol gradient 2.5-10% as an eluent to give (172 mg) of the title compound as a mixture of diastereomers (1:5 ratio).
The compound of Example 212(a) (172 mg, 0.513 mmol) was ethylated as in Example 130. The crude product was purified by flash chromatography using DCM methanol gradient 2.5-10% as an eluent to give 92 mg of cis-diastereomer, 1H NMR (400 MHz, CDCl3): 1.23 (t, 3H), 1.56-1.77 (m, 4H), 1.95-2.03 (m, 1H), 2.11-2.19 (m, 1H), 2.24-2.38 (m, 2H), 3.43 (q, 2H), 3.90 (ddd, 1H), 4.25-4.36 (m, 1H), 6.83 (dd, 1H), 6.96 (d, 1H), 7.59 (d, 1H), 8.25 (s, 2H), and 16.8 mg trans-diastereomer, 1H NMR (400 MHz, CDCl3): 1.24 (t, 3H), 1.66-1.80 (m, 2H), 1.91-2.05 (m, 3H), 2.09-2.23 (m, 1H), 2.27-2.47 (m, 2H), 3.42 (q, 2H), 3.66-3.81 (m, 1H), 4.68 (br. s., 1H), 6.61 (dd, 1H), 6.86 (d, 1H), 7.49-7.60 (m, 1H), 8.37 (br. s., 2H). LC-MS m/z=364 (M+1)+
A mixture of 4-fluoro-(2-chloro)benzonitrile (0.47 g, 3.01 mmol), 3-(1H-1,2,4-triazol-1-yl)cyclohexanamine (0.50 g, 3.01 mmol), DIPEA (1.57 ml, 9.02 mmol) and DMSO (10 ml) was heated to 80° C. for 2 h. The aqueous work up afforded 0.67 g of the title compound as 3:2 mixture of cis:trans diastereomers. The mixture was used as such in the next step.
The compound of Example 213(a) (193 mg, 0.62 mmol) was ethylated as in Example 130. The crude product was purified by flash chromatography using DCM methanol gradient 2.5-10% as an eluent to give 92 mg of cis-diastereomer, 1H NMR (400 MHz, CDCl3): 1.20 (t, 3H), 1.57-1.64 (m, 2H), 1.78-1.98 (m, 2H), 2.00-2.15 (m, 2H), 2.21 (m, 1H), 2.27-2.35 (m, 1H), 3.38 (q, 2H), 3.76-3.86 (m, 1H), 4.37 (m, 1H), 6.59 (dd, 1H), 6.72 (d, 1H), 7.43 (d, 1H), 7.95 (s, 1H), 8.11 (s, 1H), and 16.8 mg trans-diastereomer, 1H NMR (400 MHz, CDCl3): 1.21 (t, 3H), 1.62-1.82 (m, 2H), 1.82-2.02 (m, 4H), 2.21 (m, 1H), 2.48 (m, 1H), 3.25-3.45 (m, 2H), 4.35 (tt, 1H), 4.73-4.81 (m, 1H), 6.65 (dd, 1H), 6.93 (d, 1H), 7.39 (d, 1H), 8.07 (s, 1H), 8.17 (s, 1H). LC-MS m/z=330, (M+1)+
The title compound was prepared from 3-chlorocyclopent-2-enone using the methods described in Examples 210 (a-d). [M+H]+=151.
A mixture of 4-fluoro-(2-trifluoromethyl)benzonitrile (0.19 g, 1.0 mmol), the compound of Example 214(a) (0.15 g, 1.0 mmol), DIPEA (0.52 ml, 3.0 mmol) and DMSO (5 ml) was heated to 80° C. for 2 h. The aqueous work up afforded 0.32 g of the title compound as an oil. The mixture was used as such in the next step. LC-MS m/z=320, (M+1)+
The compound of Example 214(b) (231 mg, 0.72 mmol) was ethylated as in Example 130. The crude product was purified by flash chromatography using DCM methanol gradient 2.5-10% as an eluent. Yield 91 mg. 1H NMR (400 MHz, CDCl3): 1.23 (t, 3H), 1.88-2.02 (m, 1H), 2.65-2.80 (m, 1H), 2.90-3.02 (m, 1H), 3.04-3.17 (m, 1H), 3.43 (m, 2H), 5.19 (m, 1H), 6.12 (d, 1H), 6.87 (dd, 1H), 7.03 (d, 1H), 7.61 (d, 1H), 8.05 (s, 1H), 8.29 (s, 1H). LC-MS m/z=348, (M+1)+
A mixture of 4-fluoro-(2-trifluoromethyl)benzonitrile (0.12 g, 0.65 mmol), 3-(1H-imidazol-1-yl)cyclohex-3-enamine (0.11 g, 0.64 mmol), DIPEA (0.34 ml, 3.0 mmol) and DMSO (5 ml) was heated to 80° C. for 2 h. The aqueous work up afforded 0.16 g of the title compound as an oil. The mixture was used as such in the next step. LC-MS m/z=333, (M+1)+
The compound of Example 215(a) (141 mg, 0.42 mmol) was ethylated as in Example 130. The crude product was purified by flash chromatography using DCM methanol gradient 2-10% as an eluent. Yield 80 mg. 1H NMR (400 MHz, CDCl3): 1.28 (t, 3H), 1.85-1.99 (m, 1H), 1.99-2.07 (m, 1H), 2.41-2.50 (m, 2H), 2.61-2.68 (m, 2H), 3.38-3.54 (m, 2H), 4.13-4.24 (m, 1H), 5.86-5.94 (m, 1H), 6.87 (dd, 1H), 7.01 (d, 1H), 7.07-7.13 (m, 2H), 7.60 (d, 1H), 7.66 (s, 1H). LC-MS m/z=361, (M+1)+
To a stirred solution of 3-bromopyridine (509 mg, 3.20 mmol) in dry diethylether (30 ml) at −78° C. was added n-BuLi (1.6 M solution, 2.2 ml). After stirring at −78° C. for 30 min 4-(Ethyl(3-oxocyclohexyl)amino)-2-(trifluoromethyl)benzonitrile (500 mg, 1.61 mmol) in THF (5 ml) was added. The mixture was stirred at −78° C. for 4 h. The mixture was quenched by saturated aqueous NH4Cl solution and extracted with EtOAc, washed with brine, dried, filtered and concentrated under reduced pressure. The crude diasteromeric mixtures were purified by column chromatography over silica gel using hexane:EtOAc (50-70%) as the eluent to give 110 mg (18%) of diastereomer 1, 1H-NMR (400 MHz; DMSO-d6): 8.77 (d, 1H), 8.43 (d, 1H), 7.91 (d, 1H), 7.79 (d, 1H), 7.35 (dd, 1H), 7.05 (m, 2H), 5.34 (s, 1H), 4.30 (m, 1H), 3.56 (q, 2H), 1.60-2.10 (m, 8H), 1.10 (t, 3H), and 50 mg (8%) of diastereomer 2, 1H-NMR (400 MHz; DMSO-d6): 8.74 (d, 1H), 8.53 (d, 1H), 7.92 (d, 2H), 7.71 (d, 1H), 7.42 (dd, 1H), 6.79 (d, 1H), 6.69 (s, 1H), 5.34 (s, 1H), 3.37-3.49 (m, 3H), 2.38-2.52 (m, 2H), 1.41-1.98 (m, 6H), 1.15 (t, 3H); MS: m/z 390 [M+H]. The enantiomers of diastereomer 1 (69 mg) were separated by preparative chiral HPLC (Column Chiralpak IC 20 mm×250 mm 5 μm, A MTBE+0.2% DEA, B EtOH+0.2% DEA, isocratic B 5%, flow 20 ml/min, λ 300 nm) to yield 10.9 mg of enantiomer 1 (rt 5.9 min) and 11.7 mg of enantiomer 2 (rt 7.0 min). The 1H NMR spectra of enantiomers were identical: 1H NMR (400 MHz, CDCl3): 1.21 (3H, t), 1.63 (1H, m), 1.77-2.08 (7H, m), 2.65 (1H, broad s), 3.40 (2H, m), 4.41 (1H, m), 6.88 (1H, dd), 7.01 (1H, d), 7.28 (1H, m), 7.53 (1H, d), 7.85 (1H, m), 8.46 (1H, dd), 8.70 (1H, d).
To a stirred solution of NaH (9.2 mg, 0.231 mmol) in dry DMF (3 ml) under N2 at 0° C. was added diastereomer 1 of Example 216 (30 mg, 0.077 mmol). The mixture was stirred at RT for 30 min. Iodomethane (16.4 mg, 0.116 mmol) was added. After stirring overnight at RT saturated NaHCO3 solution (10 ml) was added. The product was extracted twice into ethyl acetate. The organic phase was washed with water, dried and evaporated. The crude product was purified by flash chromatography using DCM:methanol 95:5 as an eluent to give 13.75 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.19 (t, 3H), 1.53-1.68 (m, 2H), 1.71-1.99 (m, 4H), 2.11 (dd, 1H), 2.24 (d, 1H), 3.03 (s, 3H), 3.36 (quin, 2H), 4.30-4.42 (m, 1H), 6.89 (dd, 1H), 7.05 (d, 1H), 7.28-7.33 (m, 1H), 7.59 (d, 1H), 7.70-7.76 (m, 1H), 8.54 (dd, 1H), 8.64 (d, 1H).
To diasteromer 1 of Example 216 (90 mg, 0.23 mmol) was added concentrated H2SO4 (2 ml) at 0° C. The mixture was stirred 15 min at 0° C. and 30 min at RT. The mixture was basified with 5 N NaOH and extracted with EtOAc followed by washing with brine, drying, filtering and concentrating. The crude product was purified by column chromatography over silica gel using CH3OH: DCM (3%) as the eluent to give the title compound. Yield: 25 mg (30%). 1H-NMR (400 MHz; DMSO-d6): 8.67 (s, 1H), 8.43 (bs, 1H), 7.81 (d, 1H), 7.77 (d, 1H), 7.35 (dd, 1H), 7.13 (mc, 1H), 7.12 (s, 1H), 6.30 (bs, 1H), 4.27 (mc, 1H), 3.54 (q, 2H), 2.50-2.64 (m, 4H), 1.86 (m, 2H). The enantiomers were purified by chiral HPLC chromatography (Chiralpak IA 20 mm×250 mm column, MTBE:EtOH 98:2, 8.9 ml/min) to yield enantiomer 1 (rt 13.4 min) and enantiomer 2 (rt 26.6 min). LC-MS MS: m/z 372[M+H].
A mixture of the compound of Example 150 (1.05 g, 3.0 mmol), 10% Pd/C (0.76 g), AcOH (1 ml) and MeOH (25 ml) was hydrogenated in Parr-hydrogenation apparatus (50 psi) for 2 h. Catalyst was filtered off and the filtrate was concentrated. The residue was partitioned between saturated NaHCO3 solution and DCM. Aqueous layer was extracted with DCM. Combined organic layers were washed with brine, dried and concentrated. After column chromatography the title compound was collected as a mixture of enantiomers. Yield 0.7 g. 1H NMR (400 MHz, CDCl3): 1.22 (3H, t) 1.77-2.02 (3H, m) 2.08-2.22 (2H, m) 2.33-2.42 (1H, m) 3.15-3.25 (1H, m) 3.43 (2H, q) 4.23-4.33 (1H, m) 6.80-6.85 (2H, m) 6.99 (1H, d) 7.56 (1H, d) 7.61 (1H, m). [M+H]I=349.
The title compound was prepared from crude 3-(1-(2-(benzyloxy)ethyl)-1H-imidazol-5-yl)-6,6-dimethylcyclohex-2-enol (2.39 g, 7.3 mmol), DPPA (2.23 ml, 2.84 g, 10.3 mmol), DBU (1.64 ml, 1.67 g, 11.0 mmol) and toluene (12 ml) as described in Example 74(d). Crude yield 3.34 g. [M+H]+=352.
The compound was prepared from the crude compound of Example 220(a) (3.34 g), PPh3 (3.07 g, 11.7 mmol) and MeOH (20 ml) as described in Example 74(e). When all of the azide had reacted, the intermediate iminophosphorane was hydrolyzed with 2 M NaOH and water under reflux. Formed triphenylphosphine oxide was filtered off and the remaining MeOH was evaporated. Aqueous layer was acidified with 2 M HCl and extracted with EtOAc. Finally aqueous layer was basified with 2 M NaOH and extracted with DCM. Combined DCM layers were washed with water, brine, dried and concentrated. Crude yield 1.17 g. [M+H]+=326.
The compound was prepared from crude compound of Example 220(b) (1.17 g, 3.6 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.726 g, 3.8 mmol), DIPEA (1.6 ml, 1.19 g, 9.2 mmol) and DMSO (6 ml) as described in Example 74(f). Title compound was purified by column chromatography. Yield 1.01 g. [M+H]+=495.
The compound was prepared from the compound of Example 220(c) (0.5 g, 1.0 mmol), NaH (0.081 g, 2.0 mmol) and iodomethane (0.10 ml, 0.23 g, 1.6 mmol) and DMF (4 ml) as described in Example 74(g). Crude product was purified by column chromatography. Yield 0.22 g. 1H NMR (400 MHz, CDCl3): 0.91 (3H, s) 1.03 (3H, s) 1.62 (2H, m) 2.25-2.36 (1H, m) 2.36-2.47 (1H, m) 2.87 (3H, s) 3.68 (2H, t) 4.17 (2H, t) 4.38-4.42 (1H, m) 4.45 (2H, s) 5.49-5.54 (1H, m) 6.89 (1H, dd) 7.01 (1H, s) 7.04 (1H, d) 7.13-7.19 (2H, m) 7.23-7.28 (3H, m) 7.56-7.60 (2H, m). [M+H]+=509.
A flask flushed with N2 was charged with the compound of Example 220 (0.107 g, 0.21 mmol) and DCM (3 ml). The flask was cooled to −78° C. and 1 M BCl3 in THF (0.53 ml, 0.53 mmol) was added. When the reaction was completed, it was quenched with MeOH (3 ml) and saturated NaHCO3 solution was added. The aqueous layer was extracted with DCM. Combined organic layers were washed with brine, dried and concentrated. Title compound was purified by column chromatography. Yield 0.013 g. 1H NMR (400 MHz, CDCl3): 0.96 (3H, s), 1.08 (3H, s), 1.69 (2H, m), 2.31-2.41 (1H, m), 2.43-2.53 (1H, m), 2.90-3.05 (1H, br. s.), 2.97 (3H, s), 3.91 (2H, t), 4.16 (2H, t), 4.48 (1H, m), 5.61-5.65 (1H, m), 6.92 (1H, dd), 7.02 (1H, s), 7.08 (1H, d), 7.60 (1H, d), 7.72 (1H, s). [M+H]+=419.
To a solution of the compound of Example 197(c) (0.60 g) in DCM (10 ml) and MeOH (10 ml) tosylmethyl isocyanide (0.50 g) and DBU (0.645 ml) were added at RT. The mixture was stirred overnight. More DCM was added and the mixture was washed with water and brine, dried and evaporated to dryness. Crude product was purified by chromatography (silica column, eluent 0-2% MeOH/DCM) to obtain the product as a mixture of enantiomers. Yield 0.205 g. 1H NMR (400 MHz, CDCl3): 2.45-2.62 (m, 2H), 3.05-3.20 (m, 2H), 4.31-4.39 (m, 1H), 4.85 (d, 1H), 6.17-6.20 (m, 1H), 6.71 (dd, 1H), 6.87 (d, 1H), 6.94 (s, 1H), 7.56 (d, 1H), 7.82 (s, 1H).
The compound was prepared from the compound of Example 222(a) (0.050 g), iodoethane (0.019 ml) and sodium hydride (60% dispersion in mineral oil, 0.013 g) as described in Example 74(g). Crude product was purified by chromatography (silica column, eluent 1:1 heptane/EtOAc) to obtain the product as a mixture of enantiomers. Yield 0.015 g. 1H NMR (400 MHz, CDCl3): 1.24 (t, 3H), 2.63-2.80 (m, 2H), 2.92-3.09 (m, 2H), 3.45 (q, 2H), 4.71-4.79 (m, 1H), 6.22-6.26 (m, 1H), 6.80 (dd, 1H), 6.95 (s, 1H), 6.98 (d, 1H), 7.58 (dd, 1H), 7.85 (s, 1H).
A mixture of 4-fluoro-(2-trifluoromethyl)benzonitrile (1.87 g, 9.87 mmol), the cis-diastereomer of 3-(1H-1,2,3-triazol-1-yl)cyclohexanamine hydrochloride (2.0 g, 9.87 mmol) DIPEA (5.2 ml) and DMSO (10 ml) was heated to 120° C. for 3 h as described in Example 73(a). The aqueous work up afforded 2.5 g of the crude product. Column chromatography over silica gel using DCM as the eluent gave 1.42 g of the title compound. 1H NMR (400 MHz, CDCl3): 0.87-1.56 (m, 1H), 1.28-1.44 (m, 2H), 1.80-1.93 (m, 2H), 2.09 (m, 1H), 2.19-2.32 (m, 2H), 2.60-2.66 (m, 1H), 3.55-3.64 (m, 1H), 4.58-4.66 (m, 1H), 4.85 (d, 1H), 6.72 (dd, 1H), 6.87 (d, 1H), 7.27 (s, 1H), 7.54-7.60 (m, 2H), 7.72 (d, 1H).
The compound of Example 223(a) (300 mg, 0.90 mmol) was ethylated as in Example 73(c). The crude (308 mg) was purified by trituration with n-heptane. The white precipitate (258 mg) was filtered off and dried in vacuo. 1H NMR (400 MHz, CDCl3): 1.23 (t, 3H), 1.59-1.69 (m, 3H), 1.83-2.04 (m, 2H), 2.10-2.18 (m, 2H), 2.25-2.33 (m, 1H), 2.36-2.44 (m, 1H), 3.44 (q, 2H), 3.90 (m, 1H), 4.62 (m, 1H), 6.82 (dd, 1H), 6.97 (d, 1H), 7.57-7.61 (m, 2H), 7.71 (d, 1H).
The cis and trans diastereomers of the racemic compound of Example 206 were separated by preparative HPLC. Cis-diastereomer: 1H NMR (400 MHz, CDCl3): 1.20 (t, 3H), 1.40-1.50 (m, 1H), 1.53-1.74 (m, 3H), 1.90 (m, 1H), 2.07 (d, 1H), 2.17 (d, 1H), 2.76-2.86 (m, 1H), 3.41 (m, 2H), 3.77-3.86 (m, 1H), 6.76-6.83 (m, 2H), 6.95 (d, 1H), 7.53-7.60 (m, 2H). Trans-diastereomer: 1H NMR (400 MHz, CDCl3): 1.21 (t, 3H), 1.58-1.87 (m, 6H), 2.09-2.15 (m, 1H), 2.34 (d, 1H), 3.25-3.50 (m, 3H), 3.99-4.08 (m, 1H), 6.78 (dd, 1H), 6.87 (s, 1H), 7.11 (br. s., 1H), 7.51 (d, 1H), 7.66 (d, 1H).
The title compound was prepared from 2H-thiopyran-3,5(4H,6H)-dione (6.3 g, 48.4 mmol), oxalyl chloride (4.9 ml, 7.3 g, 58.1 mmol) and DCM (60 ml) as described in Example 74(a). The compound was used as such in the following step. Yield 4.0 g. [M+H]+=149.
The title compound was prepared from the compound of Example 225(a) (25.0 g, 168.2 mmol), imidazole (4.6 g, 336.5 mmol), DIPEA (55.5 ml, 336.5 mmol), and EtOH (250 ml) as described in Example 74(b). The mixture was heated to 60° C. for 4 h instead of using a microwave reactor. Crude yield 20 g. [M+H]+=181. The compound was used as such without purification.
To a compound of Example 225(b) (1.0 g, 5.54 mmol) in MeOH (20 ml) was added NH4OAc (3.4 g, 44.4 mmol) and NaCNBH4 (0.7 g, 11.1 mmol) at RT. The mixture was stirred at RT overnight. The mixture was concentrated and extracted with 10% MeOH in DCM. Yield 0.15 mg [M+H]+=182.
A mixture of 4-fluoro-(2-trifluoromethyl)benzonitrile (150 mg, 0.79 mmol), the compound of Example 225(c) (144 mg, 0.79 mmol) DIPEA (0.22 ml) and DMSO (5 ml) was heated to 80° C. for 8 h as described in Example 73(a). The aqueous work up afforded 129 mg of the title compound that was used as such in the next step. LC-MS m/z=351 (M+1)+
The compound of Example 225(d) (111 mg, 0.32 mmol) was methylated as in Example 73(c). The enantiomers were purified by chiral HPLC chromatography (Chiralpak IA 20 mm×250 mm column, n-hexane/ethanol/0.1% DEA, 1 ml/min) to yield enantiomer 1 (rt 25.3 min) and enantiomer 2 (rt 27.1 min). 1H NMR (400 MHz, CDCl3): 2.69-2.93 (m, 3H), 3.00 (s, 3H), 3.18 (dd, 1H), 4.58 (m, 1H), 6.27-6.33 (m, 1H), 6.95 (dd, 1H), 7.03-7.15 (m, 3H), 7.60-7.71 (m, 2H).
The compound was prepared as in Example 137(d) starting from the compound of Example 200(c) (0.20 g, 0.577 mmol) and (bromomethyl)cyclopropane (84 μl, 0.866 mmol). 117 mg of the title compound was obtained after preparative HPLC. 1H NMR (400 MHz, CDCl3): 0.27 (2H, m), 0.63 (2H, m), 1.00 (1H, m), 1.48 (3H, t), 2.76 (1H, m), 2.92 (1H, m), 3.02 (1H, m), 3.13 (1H, m), 3.31 (2H, m), 4.13 (2H, q), 4.66 (1H, m), 5.87 (1H, m), 6.88 (1H, dd), 7.00 (1H, s), 7.07 (1H, d), 7.51 (1H, d), 7.58 (1H, dd). The enantiomers were separated using chiral preparative HPLC (column: Daicel Chiralpak IA, 20 mm×250 mm, 5 μm particle size, eluent A: n-hexane+0.2% DEA, eluent B: EtOH+0.2% DEA, isocratic elution: 20% B, flow 20 ml/min, detection 300 nm) to afford 31.7 mg of enantiomer 1 (rt 12.1 min) and 32.4 mg of enantiomer 2 (rt 15.0 min).
The compound was prepared as in Example 197(a) starting from 2-chloro-4-iodobenzonitrile (2.63 g, 10 mmol). 2.206 g of the title compound was obtained. 1H NMR (400 MHz, CDCl3): 2.35 (1H, dt), 2.48 (1H, dt), 3.56 (1H, m), 4.87 (1H, m), 6.74 (1H, m), 7.02 (1H, dd), 7.46 (1H, dd), 7.60 (1H, d), 7.66 (1H, d).
The compound was prepared as in Example 197(b) starting from the compound of Example 227(a) (0.91 g, 3.72 mmol) and sodium borohydride (0.421 g, 11.13 mmol). Reaction was performed at 40° C. 0.593 g of the title compound was obtained after column chromatography. 1H NMR (400 MHz, CDCl3): 1.43 (1H, m), 1.51 (1H, dt), 2.56 (1H, m), 2.95 (1H, m), 3.62 (1H, m), 3.70 (1H, dt), 4.51 (1H, m), 4.70 (1H, d), 5.91 (2H, m), 6.46 (1H, dd), 6.63 (1H, d), 7.36 (1H, d)
The compound was prepared as in Example 183(a) starting from the compound of Example 227(b) (0.753 g, 3.03 mmol). 0.177 g of the title compound was obtained after flash chromatography. 1H NMR (400 MHz, CDCl3): 2.52 (1H, m), 2.59 (1H, m), 3.04 (1H, m), 3.14 (1H, m), 4.27 (1H, m), 4.59 (1H, d), 6.47 (1H, dd), 6.61 (1H, d), 6.87 (1H, m), 7.38 (1H, d), 9.78 (1H, s).
The compound was prepared as in Example 183(b) starting from the compound of Example 227(c) (0.177 g, 0.717 mmol) and ethylamine (0.717 ml, 1.435 mmol; 2 M in THF). 0.226 g of crude title product was obtained which was used as such in the next step. 1H NMR (400 MHz, CDCl3): 1.46 (3H, t), 2.51 (1H, m), 2.63 (1H, m), 3.08 (1H, m), 3.21 (1H, m), 4.10 (2H, q), 4.23 (1H, m), 4.51 (1H, d), 5.80 (1H, m), 6.47 (1H, dd), 6.63 (1H, d), 7.01 (1H, s), 7.20 (1H, d), 7.49 (1H, d).
The compound was prepared as in Example 137(d) starting from the compound of Example 227(d) (0.226 g, 0.723 mmol). 102 mg of the title compound was obtained after flash chromatography. 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.48 (3H, t), 2.68 (1H, m), 2.82 (1H, m), 2.97 (1H, m), 3.08 (1H, m), 3.41 (2H, q), 4.13 (2H, q), 4.62 (1H, m), 5.87 (1H, m), 6.60 (1H, dd), 6.74 (1H, d), 7.00 (1H, s), 7.41 (1H, d), 7.50 (1H, d). The enantiomers were separated using chiral preparative HPLC (column: Daicel Chiralpak IA, 20 mm×250 mm, 5 m particle size, eluent A: n-hexane+0.2% DEA, eluent B: EtOH+0.2% DEA, isocratic elution: 20% B, flow 20 ml/min, detection 300 nm) to afford 33.3 mg of enantiomer 1 (rt 16.1 min) and 35.7 mg of enantiomer 2 (rt 19.0 min).
3-((4-cyano-3-(trifluoromethyl)phenyl)(methyl)amino)cyclohex-1-enyl trifluoromethanesulfonate (0.192 g, 0.45 mmol), (4-methyl-3-pyridinyl)boronic acid (0.123 g, 0.90 mmol), tricyclohexylphosphine (6.28 mg, 0.022 mmol), Pd2(dba)3 (21 mg, 0.022 mmol) and potassium phosphate (0.162 mg, 0.76 mmol) were dissolved in mixture of 1,4-dioxane (7 ml) and water (3 ml) under N2-atmosphere. The mixture was heated in microwave (100° C., 1 h), diluted with ethyl acetate (5 ml) and filtrated through a short plug of silica. The crude product was purified with flash chromatography (acetone/DCM) giving 76 mg of the title product. The enantiomers were separated with chiral preparative chromatography (column: Chiralpak IA No: P33, eluent: 0.1% DEA in hexanes/EtOH+0.2% DEA (20% of B), Q=20 ml/min) to afford 30 mg of enantiomer 1 (rt=11.96 min) and 30 mg of enantiomer 2 (rt=15.72 min). 1H NMR (400 MHz, CDCl3): 1.64-1.79 (m, 1H), 1.90 (d, 1H), 1.97-2.10 (m, 2H), 2.19-2.30 (m, 1H), 2.32 (s, 3H), 2.35-2.46 (m, 1H), 2.98 (s, 3H), 4.69 (m, 1H), 5.49-5.57 (m, 1H), 6.87 (dd, 1H), 7.03 (d, 1H), 7.11 (d, 1H), 7.53-7.65 (m, 1H), 8.31 (s, 1H), 8.39 (d, 1H).
3-((4-Cyano-3-(trifluoromethyl)phenyl)(ethyl)amino)cyclohex-1-en-1-yl trifluoromethanesulfonate (0.105 g, 0.24 mmol), (6-methoxypyridin-3-yl)boronic acid (0.044 g, 0.29 mmol), tricyclohexylphosphine (3.33 mg, 0.012 mmol), Pd2(dba)3 (10.87 mg, 0.012 mmol) and potassium phosphate (0.086 mg, 0.40 mmol) were dissolved in mixture of 1,4-dioxane (1.6 ml) and water (0.8 ml) under N2. The mixture was heated in microwave (100° C., 1 h), diluted with DCM (2 ml) and filtrated through a phase separation cartridge. The crude product was purified with strong cation exchange (SCX) tube (DCM/DCM-TEA) and preparative chromatography to give 34 mg of the title product. 1H NMR (400 MHz, CDCl3): 1.18-1.32 (m, 3H), 1.76-1.89 (m, 2H), 1.95-2.08 (m, 2H), 2.34-2.54 (m, 2H), 3.38-3.59 (m, 2H), 3.87 (s, 3H), 4.58 (dd, 1H), 5.71 (dt, 1H), 6.81 (d, 1H), 6.86 (dd, 1H), 7.05 (d, 1H), 7.56 (dd, 1H), 8.25 (s, 1H), 8.41 (d, 1H).
A solution of tert-butyl((3-iodo-6,6-dimethylcyclohex-2-en-1-yl)oxy)dimethylsilane (45.0 g) in THF (500 ml) was cooled to −78° C. before adding 160 g of t-BuLi (1.5 M in pentane) dropwise over a period of 1 h. After 2 h DMF (13.5 ml) was added at −78° C. and the temperature maintained another 1 h. The reaction mixture was quenched with saturated NH4Cl solution (30 ml) at −78° C., warmed to RT and extracted with EtOAc (3×500 ml). The organic layer was washed with water, dried and evaporated to obtain the crude compound. The compound was purified by flash column using 10% ethyl acetate in petroleum ether as eluent. Yield 17 g. LCMS: no ionization.
A suspension of TosMIC (5.79 g) and K2CO3 (5.14 g) in dry MeOH (100 ml) was stirred at RT for 30 min before adding the compound of Example 230(a) (10.0 g) at RT followed by stirring for 20 h. The reaction mixture was quenched with cold water and most of the solvent was evaporated. The aqueous layer was extracted with EtOAc (3×200 ml) and the organic layer was washed with water, dried and evaporated to obtain crude product. The compound was purified by flash column using 3% MeOH in CH2Cl2 as eluent. Yield: 1.4 g. LCMS: m/z=308.3 (m+1)+.
To a solution of the compound of Example 230(b) (2.0 g) in THF (10 ml) was added TBAF (1.0 M in THF) at RT followed by stirring for 4 h. The reaction mixture was quenched with cold water and extracted with EtOAc (3×200 ml). The organic layer was washed with water, dried and evaporated to obtain the crude compound. The compound was purified by flash column using 5% methanol in CH2Cl2 as eluent. Yield: 1.0 g. LCMS: no ionization.
Title compound was prepared from the compound of Example 230(c) (4.0 g), DBU (6.3 g) and DPPA (8.54 g) in toluene (40 ml) as described in Example 6(d). The crude compound was used in the next step as such. Yield: 1.6 g.
To a solution of the compound of Example 230(d) (2.0 g) in THF (10 ml) and H2O (5 ml) was added PPh3 (1.20 g) at 60° C. followed by stirring for 16 h. The reaction mixture was quenched with cold water and extracted with EtOAc (2×100 ml). The organic layer was washed with water, dried and evaporated to obtain the crude compound. The crude compound was purified by flash column using 5% methanol in CH2Cl2 as eluent. Yield: 0.5 g. 1HNMR (400 MHz, DMSO-d6): 0.78 (s, 3H), 0.88 (s, 3H), 1.35-1.43 (m, 1H), 1.53-1.60 (m, 1H), 1.65-1.99 (br, 2H) 2.18-2.25 (m, 2H), 3.00-3.05 (m, 1H), 6.05-6.10 (m, 1H), 7.10 (s, 1H), 8.25 (s, 1H).
The compound of Example 230(e) (360 mg, 1.56 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (300 mg, 1.59 mmol), DIPEA (0.54 ml, 3.12 mmol) and DMSO (3 ml) were mixed and heated at 100° C. When the reaction was complete, the mixture was poured in water and extracted in EtOAc. The mixture was washed with water and brine, dried and evaporated. The product (0.25 g) was purified with flash chromatography. [M+1]+=362.
60% Sodium hydride (0.083 g, 2.07 mmol) was washed with heptane. Dry DMF (5 ml) was added and the mixture was cooled to 0° C. Compound of Example 230(f) (250 mg, 0.69 mmol) in dry DMF (5 ml) was added and the mixture was stirred at 0° C. for 25 min. Iodomethane (0.086 ml, 1.384 mmol) was added followed by stirring at 0° C. for 30 min. The mixture was left to reach RT during 2.5 h. Iodomethane (0.2 eq.) was added followed by stirring for additional 2 h. Water was added and the product was extracted in EtOAc, dried and evaporated. The final product was purified with column chromatography (DCM-MeOH) to afford 220 mg of the title compound. 1H NMR (400 MHz, CDCl3): 0.96 (s, 3H), 1.08 (s, 3H), 1.65-1.77 (m, 2H), 2.30-2.59 (m, 2H), 2.98 (s, 3H), 4.52 (d, 1H), 6.06-6.12 (m, 1H), 6.96 (dd, 1H), 7.05 (s, 1H), 7.10 (d, 1H), 7.55-7.64 (m, 1H), 7.83 (s, 1H). The enantiomers were separated using chiral HPLC (column: Chiralpak IA No: P33, eluent: 0.2% DEA in MTBE/EtOH+0.2% DEA (3% of B), Q=20 ml/min) to afford 69 mg of enantiomer 1 (rt=5.97 min) and 72 mg of enantiomer 2 (rt=7.33 min).
The compound of Example 230(e) (370 mg, 1.93 mmol), 2-chloro-4-fluorobenzonitrile (305 mg, 1.96 mmol), DIPEA (0.67 ml, 3.85 mmol) and DMSO (4 ml) were mixed and heated at 100° C. When the reaction was complete the mixture was poured in water and extracted in EtOAc. The mixture was washed with water and brine, dried and evaporated. The product was purified with flash chromatography to afford 0.103 g of the title compound. [M+1]+=328.
60% Sodium hydride (0.015 g, 0.61 mmol) was washed with pentane. Dry DMF (2 ml) was added and the mixture was cooled to 0° C. Compound of Example 231(a) (100 mg, 0.305 mmol) in dry DMF (3 ml) was added and the mixture was stirred at 0° C. for 30 min. Iodomethane (0.019 ml, 0.305 mmol) was added and the mixture was stirred at 0° C. for 30 min and left to reach RT overnight. Iodoethane (1.5 eq.) and NaH (2 eq.) were added and the mixture was stirred for 24 h. Water was added and the product was extracted in EtOAc, dried and evaporated. The final product was purified with preparative HPLC. Yield 18 mg. 1H NMR (400 MHz, CDCl3): 0.94 (s, 3H), 1.06 (s, 3H), 1.61-1.75 (m, 2H), 2.32-2.54 (m, 2H), 2.91 (s, 3H), 4.38-4.47 (m, 1H), 6.06 (dt, 1H), 6.72 (dd, 1H), 6.83 (d, 1H), 7.03 (s, 1H), 7.44 (d, 1H), 7.82 (s, 1H).
Potassium carbonate (2.073 g, 15.0 mmol), palladium(II)acetate (0.067 g, 0.300 mmol) and toluene (20 ml) were charged into microvial. 2-Ethylene hexanoic acid (0.160 ml, 1.00 mmol), thiazole (1.419 ml, 20.0 mmol) and 3-chlorocyclohex-2-enone (1.109 ml, 10 mmol) were added and air was removed with N2. Tricyclohexylphosphine (0.252 g, 0.90 mmol) was added, tube sealed followed by heating at 110° C. overnight. Water (50 ml) was added and mixture was extracted with EtOAc. Combined organic phases were washed with brine, dried and evaporated. The mixture was filtrated through a pad of celite and purified with flash chromatography (EtOAc/heptane) giving 611 mg of the title compound. [M+1]+=180.
2 M Ammonia in IPA (5.8 ml) was added dropwise to an ice-cold compound of Example 232(a) (0.60 g, 3.35 mmol) under N2 atmosphere. The mixture was stirred for 10 min at 0° C. Titanium(IV)isopropoxide (1.98 ml, 6.69 mmol) was added and the mixture was left to reach RT overnight. The mixture was cooled to 0° C. and sodium borohydride (127 mg, 3.35 mmol) was added. The mixture was stirred at RT for 24 h. 1 M NH3 (aq.) was added and the product was extracted in EtOAc, dried and evaporated, giving 420 mg of the title compound. [M+1]+=181.
Compound of Example 232(b) (500 mg, 2.77 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (535 mg, 2.83 mmol), DIPEA (0.97 ml, 5.55 mmol) and DMSO (7 ml) were mixed and heated at 100° C. When the reaction was complete the mixture was poured in water and extracted in EtOAc. The mixture was washed with water and brine, dried and evaporated. The product was purified with flash chromatography affording 0.38 g of the title compound. [M+1]+=350.
60% Sodium hydride (0.065 g, 1.63 mmol) was washed with heptane. Dry DMF (4 ml) was added and the mixture was cooled to 0° C. Compound of Example 232(c) (380 mg, 1.09 mmol) in dry DMF (4 ml) was added and the mixture was stirred at 0° C. for 30 min. Iodomethane (0.135 ml, 2.18 mmol) was added and the mixture was stirred at 0° C. for 10 min and after that for 4.5 h at RT. Water was added and the product was extracted in EtOAc, washed with water and brine, dried and evaporated. The final product was purified with flash chromatography (EtOAc-Heptane) giving 242 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.62-1.75 (m, 1H), 1.86 (d, 1H), 1.96-2.11 (m, 3H), 2.51-2.59 (m, 2H), 2.94 (s, 3H), 4.67 (dt, 1H), 5.99 (d, 1H), 6.87 (dd, 1H), 7.02 (d, 1H), 7.56-7.64 (m, 1H), 7.83 (s, 1H), 8.64-8.70 (m, 1H). The enantiomers were separated using chiral HPLC (column: Chiralpak IA No: P39, eluent: 0.2% DEA in MTBE/IPA+0.2% DEA (5% of B), Q=20 ml/min) to give 60 mg of enantiomer 1 (rt=8.132 min) and 70 mg of enantiomer 2 (rt=12.403 min).
The enantiomers of the racemic compound of Example 222 were separated from the racemic mixture by chiral HPLC chromatography (Chiralpak 1A 20 mm×250 mm column, eluent A: n-hexane+0.2% DEA, eluent B: EtOH+0.2% DEA, isocratic B 15%, 20 ml/min) to give enantiomer 1 (rt 14.5 min) and enantiomer 2 (rt 16.0 min).
The compound was prepared from the compound of Example 2(b) (6.16 g, 22.1 mmol), methanesulfonyl chloride (3.29 g, 28.7 mmol) and TEA (6.16 ml, 44.2 mmol) in DCM (90 ml) as in Example 44(a) yielding 6.27 g of the title compound as a mixture of diastereomers (1H NMR trans:cis 84:16). LCMS: m/z=357.3 (M+1)+.
The compound was prepared from the compound of Example 234(a) (3.15 g), sodium hydride (60% dispersion in mineral oil, 1.06 g) and iodomethane (1.65 ml) in DMF (25 ml) yielding 3.64 g (raw material) of the title product as a mixture of diastereomers (1H NMR trans:cis 89:11). Crude product was used as such in the next step. LCMS: m/z=371.3 (M+1)+
The compound was prepared from the compound of Example 234(b) (1.50 g) and sodium imidazole-1-ide (0.728 g) in DMF as in Example 44(c). Crude product was purified and isomers were separated by chromatography (1st silica column, eluent DCM+0.5% MeOH, 2nd Chiralpak IA 20×250 mm, 5 um, eluent A: MTBE+0.2% DEA, eluent B: EtOH+0.2% DEA, isocratic B 5%, 20 ml/min) to obtain enantiomer 1 (yield 0.080 g, rt 19.6 min) and enantiomer 2 (yield 0.077 g, rt 24 min) of the trans-diastereomer, 1H NMR (400 MHz, CDCl3): 0.87 (s, 3H), 1.15 (s, 3H), 1.42-1.57 (m, 1H), 1.65 (td, 1H), 2.02-2.18 (m, 2H), 2.21-2.28 (m, 1H), 2.42-2.52 (m, 1H) 2.91 (s, 3H) 3.79 (dd, 1H), 4.52-4.56 (m, 1H), 6.53 (dd, 1H), 6.67 (d, 1H), 7.03 (t, 1H), 7.15 (t, 1H), 7.34 (d, 1H), 7.65 (s, 1H), and enantiomer 1 (rt 48 min, yield 0.0045 g) and enantiomer 2 (rt 63 min, yield 0.0059 g) of the cis-diastereomer, 1H NMR (400 MHz, CDCl3): 0.99 (s, 3H), 1.16 (s, 3H), 1.52-1.73 (m, 2H), 1.86-1.97 (m, 1H), 1.98-2.10 (m, 2H), 2.26 (q, 1H), 2.88 (s, 3H), 3.78 (dd, 1H), 4.10-4.20 (m, 1H), 6.71 (dd, 1H), 6.83 (d, 1H), 6.99 (t, 1H), 7.08 (t, 1H), 7.44 (d, 1H), 7.58 (t, 1H). LCMS: m/z=343.4 (M+1)+.
The compound was prepared from the compound of Example 234(a) (3.12 g), sodium hydride (60% dispersion in mineral oil, 1.05 g) and iodoethane (1.76 ml) in DMF (25 ml) yielding 3.40 g (raw material) of the title product as a mixture of diastereomers. (1H NMR trans:cis 89:11). Crude product was used as such in the next step. LCMS: m/z=385.4 (M+1)+.
The compound was prepared from the compound of Example 235(a) 1.50 g and sodium imidazole-1-ide (0.702 g) in DMF (15 ml) as in Example 44(c). Crude product was purified and isomers were separated by chromatography (1st silica column, eluent DCM+2% MeOH, 2nd Chiralpak IA 20×250 mm, eluent A: MTBE+0.4% DEA, eluent B: EtOH+0.4% DEA, isocratic B 5%, 20 ml/min) to obtain enantiomer 1 (rt 16.4 min, yield 0.080 g) and enantiomer 2 (rt 23.5 min, yield 0.077 g) of the trans-diastereomer, 1H NMR (400 MHz, CDCl3): 0.86 (s, 3H), 1.13 (s, 3H), 1.18 (t, 3H), 1.44-1.52 (m, 1H), 1.59-1.68 (m, 1H), 2.01-2.13 (m, 1H), 2.16-2.28 (m, 2H), 2.40-2.49 (m, 1H), 3.41 (q, 2H), 3.83 (dd, 1H), 4.52-4.55 (m, 1H), 6.53 (dd, 1H), 6.67 (d, 1H), 7.03 (t, 1H), 7.15 (t, 1H), 7.35 (d, 1H), 7.65 (t, 1H), and enantiomer 1 (rt 33.5 min, yield 0.0045 g) and enantiomer 2 (rt 38.5 min, yield 0.0059 g) of the cis-diastereomer, 1H NMR (400 MHz, CDCl3): 0.96 (s, 3H), 1.09-1.16 (m, 6H), 1.51-1.61 (m, 1H), 1.64-1.72 (m, 1H), 1.86-1.98 (m, 1H), 1.99-2.14 (m, 2H), 2.23 (q, 1H), 3.33-3.43 (m, 2H), 3.81 (dd, 1H), 4.08-4.18 (m, 1H), 6.70 (dd, 1H), 6.83 (d, 1H), 7.00 (t, 1H), 7.09 (t, 1H), 7.42 (d, 1H), 7.59 (t, 1H). LCMS: m/z=357.3 (M+1)+.
A suspension of the compound of Example 262 (0.105 g), triphenylphosphine (0.560 g) and 4-nitrobenzoic acid (0.321 g) in toluene (12 ml) was stirred at RT for 30 min under N2. Diethyl azodicarboxylate (0.336 ml solution in toluene 5 ml) was added dropwise and stirring was continued overnight. EtOAc was added and the mixture was washed with 1M Na2CO3, water and brine. Organic phase was dried and evaporated. Impurities and excess of the reagents were partly removed by chromatography (silica column, eluent 0-3% MeOH/DCM). Yield 0.464 g (crude). LCMS: m/z=540.3 (M+1)+.
The compound from Example 236(a) (0.464 g, crude) was suspended to a mixture of MeOH (4 ml) and water (1 ml). At ice-bath K2CO3 (0.186 g) was added and stirring continued for 1 h. EtOAc was added, the mixture washed with 1 M Na2CO3 and brine. Organic phase was dried and evaporated. Compound was purified by chromatography (silica column, eluent 0-2.5% MeOH/DCM). Yield 0.062 g. LCMS: m/z=391.3 (M+1)+. 1H NMR (400 MHz, CDCl3): 1.06 (s, 3H), 1.15 (s, 3H), 1.5 (br, s., 1H), 1.93-2.09 (m, 2H), 3.05 (s, 3H), 4.48-4.52 (m, 1H), 4.61-4.66 (m, 1H), 5.70 (d, 1H), 6.94 (dd, 1H), 7.01 (t, 1H), 7.08 (d, 1H), 7.19 (t, 1H), 7.59 (d, 1H), 7.68 (t, 1H).
The compound was prepared from 3-chloro-6,6-dimethylcyclohex-2-enone (1.60 g), thiazole (1.12 g), 2-ethylhexanoic acid (0.145 g), Pd(Ac)2 (0.113 g), K2CO3 (2.09 g) and tricyclohexylphosphine (0.424 g) as in Example 232(a) except that mixture of toluene (24 ml) and DMF (4 ml) was used as a solvent. Reaction time at microwave reactor was 10 h at 110° C. Crude product was purified by chromatography (silica column, eluent 0-30% EtOAc/heptane) to obtain the title compound. Yield 0.70 g. LCMS: m/z=208.1 (M+1)+.
The compound was prepared from the compound of Example 237(a) (0.65 g), titanium(IV)isopropoxide (1.79 g), ammonia 2 M in IPA (5.5 ml) and NaBH4 (0.119 g) as in Example 232(b) Yield 0.56 g. 1H NMR (400 MHz, CDCl3): 0.88 (s, 3H), 1.01 (s, 3H), 1.30 (br, s, 2H), 1.51-1.59 (m, 1H), 1.62-1.69 (m, 1H), 2.33-2.49 (m, 2H), 3.13-3.16 (m, 1H), 5.97-6.02 (m, 1H), 7.75 (s, 1H), 8.61 (s, 1H).
The compound was prepared from the compound of Example 237(b) (0.56 g), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.51 g) and DIPEA (0.70 g) in DMSO (10 ml). Reaction time was 5 h at 100° C. Crude product was purified by chromatography (silica column, eluent 0-60% EtOAc/heptane) to obtain the title compound as a mixture of enantiomers. Yield 0.44 g. LCMS: m/z=378.7 (M+1)+.
The compound was prepared from the compound of Example 237(c) (0.44 g), sodium hydride (60% dispersion in mineral oil, 0.070 g) and iodomethane (0.145 ml) in DMF (8 ml). Reaction time was 1 h at ice bath. Crude product was purified and isomers were separated by chromatography (1st silica column, eluent 10-50% EtOAc/heptane, 2nd Chiralpak IA 20×250 mm, eluent A: MTBE+0.2% DEA, eluent B: IPA+0.2% DEA, isocratic B 5%, 20 ml/min) to obtain enantiomer 1 (rt 5.8 min, yield 0.130 g) and enantiomer 2 (rt 8.7 min, yield 0.138 g). LCMS: m/z=392.8 (M+1)+. 1H NMR (400 MHz, CDCl3): 0.96 (s, 3H), 1.08 (s, 3H), 1.67-1.80 (m, 2H), 2.46-2.71 (m, 2H), 2.98 (s, 3H), 4.43-4.47-4.53 (m, 1H), 5.86-5.95 (m, 1H), 6.94 (dd, 1H), 7.09 (d, 1H), 7.60 (d, 1H), 7.85 (s, 1H), 8.68 (s, 1H).
The compound was prepared from the compound of Example 117(f) (0.80 g), 3 M EtMgBr solution in Et2O (1.37 ml) and 4-iodoisoxazole (0.503 g) in DCM (25 ml). Reaction time was 2 h at RT. The crude product was purified and isomers were separated by chromatography (1st silica column, eluent 0-10% MeOH/DCM, 2nd silica column, eluent 50-80% EtOAc/heptane) to obtain cis- and trans-diastereomers of the title compound. Yields: 0.108 g (trans-diastereomer), 0.025 g (cis-diastereomer). LCMS: m/z=380 (M+1)+. Trans-diastereomer: 1H NMR (400 MHz, CDCl3): 1.21 (t, 3H), 1.55-1.65 (m, 1H), 1.65-1.76 (m, 2H), 1.84-1.92 (m, 1H), 1.93-2.05 (m, 2H), 2.07-2.14 (m, 2H), 2.28 (br. s., 1H), 3.32-3.45 (m, 2H), 4.33 (m, 1H), 6.88 (dd, 1H), 7.01 (d, 1H), 7.53 (d, 1H), 8.30 (s, 1H), 8.36 (s, 1H). Cis-diastereomer: 1H NMR (400 MHz, CDCl3): 1.24 (t, 3H), 1.40-1.50 (m, 1H), 1.55-1.63 (m, 1H), 1.73-1.80 (m, 1H), 1.83-1.88 (m, 1H), 1.95-2.04 (m, 2H), 2.09 (br. s., 1H), 2.28-2.36 (m, 2H), 3.42 (q, 2H), 3.52-3.59 (m, 1H), 6.61 (dd, 1H), 6.79 (d, 1H), 7.54 (d, 1H), 8.40 (s, 1H), 8.51 (s, 1H).
To an ice cold concentrated H2SO4 (0.70 ml) the compound of Example 238 (0.050 g) was added. After stirring for 10 min ice cold water was added, the mixture neutralized with 6 M NaOH and the product extracted into EtOAc. EtOAc was washed with brine, dried and evaporated. The residue was dissolved into Et2O, drops of heptane were added and the precipitated title compound filtered. Yield: 0.023 g. LCMS: m/z=362 (M+1)+. 1H NMR (400 MHz, CDCl3): 1.28 (t, 3H), 1.83-2.04 (m, 2H), 2.42-2.49 (m, 4H), 3.37-3.52 (m, 2H), 4.08-4.16 (m, 1H), 6.08-6.13 (m, 1H), 6.86 (dd, 1H), 7.00 (d, 1H), 7.59 (d, 1H), 8.29 (s, 1H), 8.38 (s, 1H).
The compound was prepared from 2-(difluoromethyl)-4-fluorobenzonitrile (5.18 g), compound of Example 21(a) (pure enantiomer) (5.79 g) and DIPEA (13.2 ml) in DMSO (30 ml). Reaction time was 12 h at 100° C. Crude product was purified by chromatography (silica column, eluent 0-10% MeOH/DCM) yielding 3.76 g of the title compound. LCMS: m/z=343.6 (M+1)+.
The compound was prepared from the compound of Example 240(a) (1.46 g), sodium hydride (60% dispersion in mineral oil, 0.26 g) and iodomethane (0.48 ml) in DMF (23 ml) at −10° C. Crude product was purified by chromatography (silica column, eluent 0-10% MeOH/DCM) yielding 0.71 g of the title compound. LCMS: m/z=358.1 (M+1)+.
The compound was prepared from the compound of Example 240(b) (1.20 g), SeO2 (0.374 g) and pyridine 1-oxide (1.50 g) in 1,3-dioxane (12 ml) as in Example 253(a). Reaction time at microwave reactor was 2 h at 140° C. Crude product was purified by chromatography (silica column, eluent 0-10% MeOH/DCM) yielding 0.225 g of the title compound. LCMS: m/z=373.6 (M+1)+. 1H NMR (400 MHz, CDCl3): 1.05 (s, 3H), 1.16 (s, 3H), 1.7 (br, s., 1H), 1.88 (dd, 1H), 2.13-2.21 (m, 1H), 2.94 (s, 3H), 4.71-4.78 (m, 2H), 5.70-5.72 (m, 1H), 6.87 (t, 1H), 6.90 (dd, 1H), 7.08 (d, 1H), 7.10-7.13 (m, 1H), 7.17 (t, 1H), 7.52-7.59 (m, 1H), 7.66-7.76 (m, 1H).
The compound was prepared from Example 240(c) (0.28 g), triphenylphosphine (1.56 g), 4-nitrobenzoic acid (0.89 g) and diethyl azodicarboxylate (0.933 ml) in toluene (46 ml) as in Example 236(a). Impurities and excess of the reagents were partly removed by chromatography (silica column, eluent 0-10% MeOH/DCM). Yield: 2.30 g (crude). LCMS: m/z=522.4 (M+1)+.
The compound was prepared from the compound of Example 241(a) (2.3 g, crude) and K2CO3 (0.515 g) in the mixture of MeOH (12 ml) and water (3 ml) as described in Example 236(b). Yield: 0.21 g. LCMS: m/z=373.6 (M+1). 1H NMR (400 MHz, CDCl3): 1.07 (s, 3H), 1.15 (s, 3H), 1.5 (br, s., 1H), 1.91-1.99 (m, 1H), 2.02-2.10 (m, 1H), 3.05 (s, 3H), 4.52-4.56 (m, 1H), 4.63-4.68 (m, 1H), 5.70-5.74 (m, 1H), 6.87 (t, 1H), 6.89 (dd, 1H), 7.08 (d, 1H), 7.09-7.11 (m, 1H), 7.19 (t, 1H), 7.53-7.58 (m, 1H), 7.72 (t, 1H).
To 4-bromo-2-oxocyclohex-3-en-1-yl acetate (8.0 g) in toluene (80 ml) were added Et3N (7.2 ml), KHCO3 (4.12 g) and imidazole (6.9 g) and the resulting mixture was heated to 100° C. for 6 h. The mixture was concentrated, poured into water (100 ml) and extracted with EtOAc (2×100 ml). The organic layer was dried and concentrated to obtain the crude compound. The compound was purified by flash column using 100-200 mesh silica gel and eluted with 4% MeOH in CH2Cl2 to afford 4.5 g of the title compound. LCMS: m/z=221 (M+1)+.
To a cold stirred solution of the compound of Example 242(a) (4.0 g) in IPA (40 ml) 5 M NH3 in IPA (40 ml) was added followed by dropwise addition of 10.3 ml of Ti(iOPr)4. The mixture was allowed to warm up to RT and stirred for 4 h. The mixture was again cooled to 0° C., sodium borohydride (2.06 g) was added, and the mixture was stirred at RT for 16 h. The mixture was poured into ice cold water (100 ml) and extracted with 15% MeOH in CH2Cl2 (2×100 ml). The organic layer was dried, filtered and concentrated to afford crude compound which was directly used to next step. Yield 2.5 g (crude). LCMS: m/z=180 (M+1)+.
To a cold stirred solution of the compound of Example 242(b) (2.5 g crude) in CH2Cl2 (25 ml) was added Et3N (2.8 ml) followed by Boc2O (3.6 ml). The mixture was stirred at RT for 16 h, poured into water (75 ml) and extracted with CH2Cl2 (2×75 ml). The organic layer was dried, filtered and concentrated to afford crude compound. The compound was purified by flash column using 100-200 mesh silica gel and eluted with 3% MeOH in CH2Cl2 to afford 1.5 g of the title compound. LCMS: m/z=280 (M+1)+.
To an ice cold stirred suspension of NaH 60% (0.372 g) in THF was added the compound of Example 242(c) (2.0 g) in THF (10 ml) at 0° C. After 15 min benzyl bromide (1.0 ml) was added and the mixture was allowed to stir at RT for 16 h. The mixture was poured into ice cold water (40 ml) and extracted with EtOAc (2×100 ml). The organic layer was washed with brine, dried, filtered and concentrated to afford crude compound. The compound was purified by flash column using 100-200 mesh silica gel and eluted with 3% MeOH in CH2Cl2 to afford 0.7 g of the title compound. Isomers were separated by chiral chromatography (Chiralcel OJ-H 250×30 mm, CO2 85%, Co solvent 15% (0.5% DEA in MeOH), flow 70 g/min). Yields: (1) 0.02 g, (2) 0.1 g, (3) 0.02 g and (4) 0.15 g. Using chiral column Chiracel OJ-H (4.6×250 mm), 5 um and eluent CO2 80%, Co solvent 20% (0.5% DEA in MeOH), flow 3 g/min, retention times of the isomers are: (1) 2.26 min, (2) 2.53 min, (3) 2.87 min and (4) 6.22 min. Based on 1HNMR (1) and (3) are enantiomers, and (2) and (4) are a second pair of enantiomers. LCMS: m/z=370 (M+1)+.
The compound of Example 242(d) (isomer 2) (0.30 g), was added to a solution of 5 M HCl in dioxane (20 ml) at 0° C. The resulting mixture was stirred at RT for 6 h and concentrated under reduced pressure to afford crude compound. The compound was triturated with anhydrous Et2O to afford 0.23 g of the title compound. LCMS: m/z=270 (M+1)+.
The compound was prepared from the compound of Example 242(e) (isomer 2) (0.213 g), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.132 g) and DIPEA (0.606 ml) in DMSO (5 ml). Reaction time was 3 h at 100° C. The crude product was purified by chromatography (silica column, eluent 0-10% MeOH/DCM) to obtain the title compound. Yield 0.105 g. LCMS: m/z 439.6 (M+1)+.
The compound was prepared from the compound of Example 242(f) (0.105 g), sodium hydride (60% dispersion in mineral oil, 0.019 g) and iodomethane (0.030 ml) in DMF (2 ml) at ice-bath. Reaction time was 1 h. Yield 0.059 g. The crude compound was used to next step without purification. LCMS: m/z=453.7 (M+1)+.
The compound of Example 242(g) (0.058 g), BCl3 (1M solution in heptane, 0.39 ml) and DCM (1 ml) were stirred at ice-bath for 1 h. The mixture was neutralized with NH3 (25% in H2O) and evaporated to dryness. The crude product was purified by chromatography (silica column, eluent 0-10% MeOH/DCM) to give 0.021 g of the title compound. LCMS: m/z=363.6 (M+1)+. 1H NMR (400 MHz, CDCl3): 2.05-2.15 (m, 1H), 2.22-2.32 (m, 1H), 2.63-2.81 (m, 2H), 2.8 (br, 1H), 2.97 (s, 3H), 4.06 (m, 1H), 4.64-4.70 (m, 1H), 5.58 (m, 1H), 7.01 (dd, 1H), 7.05-7.07 (m, 1H), 7.12 (t, 1H), 7.14 (d, 1H), 7.56 (d, 1H), 7.60-7.68 (m, 1H). Similarly, starting from isomer 4 of the compound of Ex 241(d) an other enantiomer of the compound of Ex 241(h) was prepared.
The title compound was prepared as in Example 112(h) using 2-chloro-4-{[5-hydroxy-2,2-dimethyl-5-(1-trityl-1H-imidazol-4-yl)cyclohexyl](methyl)amino}-benzonitrile (Example 2(g), mixture of diastereomers 77:23) as a starting material. After adjustment of pH to 8-9 with aqueous NaHCO3 the precipitation (diastereomer 1) was filtered, washed with water and dried in vacuum (40° C.) overnight. This crude product was triturated in boiling DCM, the mixture was cooled, the solid material was filtered and dried in vacuum (40° C.) to give the major diastereomer 1. The basic water phase was extracted with DCM. The combined organic layers were washed with water, dried, filtered and evaporated. This crude product was purified by flash chromatography on silica gel by using DCM-MeOH as a gradient eluent (100:0-90:10) to give the product as a mixture of diastereomers (1H NMR 10:90). Diastereomer 2 was purified by preparative chiral HPLC (Column Chiralpak IC 20 mm×250 mm 5 μm, A n-hexane+0.2% DEA, B EtOH+0.2% DEA, isocratic B 10%, flow 20 ml/min, λ 300 nm) to yield pure diastereomer 2. The major diastereomer 1: 1H NMR (400 MHz, MeOH-d4): 0.93 (3H, s), 1.16 (3H, s), 1.36 (1H, m), 1.70 (2H, m), 2.02 (2H, m), 2.51 (1H, t), 2.90 (3H, s), 4.37 (1H, dd), 6.91 (1H, dd), 6.97 (1H, d), 6.99 (1H, d), 7.48 (1H, d), 7.60 (1H, d). The minor diastereomer 2: 1H NMR (400 MHz, CDCl3): 0.79 (3H, s), 1.13 (3H, s), 1.37-1.44 (2H, m), 1.90 (1H, m), 2.28 (3H, m), 2.87 (3H, s), 3.71 (1H, dd), 6.53 (1H, dd), 6.67 (1H, d), 7.00 (1H, d), 7.32 (1H, d), 7.55 (1H, d).
Sodium hydride (60% dispersion in mineral oil, 3.42 g, 85 mmol) was added in portions to a solution of the compound of Example 1(c) (mixture of diastereomers, 18.22 g, 42.7 mmol) in 140 ml of dry DMF at 0° C. under N2. The mixture was allowed to stir at 0° C. for 40 min. Iodomethane (12.12 g, 85 mmol) was added slowly at 0° C. and the mixture was stirred for 20 min at 0° C. and for 3 h at RT. The mixture was quenched with saturated aqueous NH4Cl solution (250 ml) and water (150 ml) (the ice bath cooling). The product was extracted into toluene (3×200 ml). The combined organic layers were washed with brine (375 ml) and water (2×200 ml), dried, filtered and evaporated. Crystallization of the crude product (20.15 g, mixture of diastereomers) in heptane (70 ml) gave 11.78 g of pure major diastereomer 1. More (1.49 g) of the product (mixture of diastereomers 36:64) was crystallized from the mother liquor. The major diastereomer 1: 1H NMR (400 MHz, CDCl3): 0.06 (3H, s), 0.07 (3H, s), 0.89 (12H, s), 1.07 (3H, s), 1.32-1.55 (3H, m), 1.70-1.77 (2H, m), 1.95 (1H, m), 2.91 (3H, s), 3.64 (1H, dd), 3.71 (1H, m), 6.90 (1H, dd), 7.05 (1H, d), 7.57 (1H, d).
Thionyl chloride (14.33 g, 120 mmol) was added slowly to a solution of the compound of Example 244(a) (mixture of diastereomers, 13.27 g, 30.1 mmol) in 250 ml of dry methanol at 0° C. under N2. Thereafter the solution was allowed to stir at RT for 2 h. The solvent was evaporated and ethyl acetate (350 ml) and water (175 ml) were added. The mixture was made basic (pH 8) with 1 M aqueous NaOH solution and the layers were separated. The water phase was extracted with ethyl acetate (150 ml). The combined organic layers were washed with water (250 ml) and brine (200 ml), dried, filtered and evaporated. The crude product was the mixture of diastereomers (1H NMR 93:7).
The title compound was prepared as in Example 112(f) from the compound of Example 244(b) (mixture of diastereomers, 9.83 g, 30.1 mmol). Yield 6.31 g. 1H NMR (400 MHz, DMSO-d6): 0.89 (3H, s), 1.16 (3H, s), 1.54 (1H, m), 1.81 (1H, td), 2.16 (2H, m), 2.44 (1H, td), 2.90 (3H, s), 3.07 (1H, t), 4.42 (1H, dd), 7.22-7.26 (2H, m), 7.76 (1H, d).
The title compound was prepared as in Example 112(g) from the compound of Example 244(c). The crude product was used as such in the next step.
Deprotection of the compound of Example 244(d) was done as in Example 112(h). The precipitated crude major diastereomer 1 was filtered from the basic DCM-water mixture. Methanol was added to this filtered product and the insoluble product was filtered and recrystallized from DCM to obtain the pure major diastereomer 1. The minor diastereomer 2 was extracted into DCM from the basic water layer. The combined organic layers were washed with water, dried, filtered and evaporated. The crude product was purified by flash chromatography on silica gel by using the DCM-MeOH as a gradient eluent (97:3-90:10) to give the minor diastereomer 2. The final purification of the minor diastereomer 2 was performed by preparative chiral HPLC (Column Chiralpak IC 20 mm×250 mm 5 μm, A n-hexane+0.2% DEA, B EtOH+0.2% DEA, isocratic B 15%, flow 20 ml/min, λ 300 nm) to yield pure diastereomer 2 (rt 10.5 min). The major diastereomer 1: 1H NMR (400 MHz, MeOH-d4): 0.94 (3H, s), 1.18 (3H, s), 1.35-1.40 (1H, m), 1.67-1.75 (2H, m), 2.03 (2H, m), 2.54 (1H, t), 2.96 (3H, s), 4.45 (1H, dd), 6.98 (1H, d), 7.14 (1H, dd), 7.22 (1H, d), 7.61 (1H, d), 7.66 (1H, d). The minor diastereomer 2: 1H NMR (400 MHz, CDCl3): 0.79 (3H, s), 1.15 (3H, s), 1.39-1.46 (2H, m), 1.93 (1H, m), 2.23-2.36 (3H, m), 2.93 (1H, s), 3.85 (1H, m), 6.75 (1H, dd), 6.97 (1H, d), 7.02 (1H, d), 7.50 (1H, d), 7.58 (1H, d).
The title compound was prepared as in Example 112(i) from the compound of Example 244(e) (diastereomer 1, 1.78 g). Yield 0.64 g. 1H NMR (400 MHz, CDCl3): 1.01 (3H, s), 1.06 (3H, s), 2.12-2.19 (1H, m), 2.25-2.32 (1H, m), 2.63-2.74 (2H, m), 3.01 (3H, s), 4.16 (1H, t), 6.33 (1H, broad s), 6.93 (1H, dd), 6.97 (1H, s), 7.07 (1H, d), 7.57 (1H, d), 7.63 (1H, d).
The compound of Example 244 (210 mg, 0.561 mmol), pyridine 1-oxide (251 mg, 2.64 mmol) and selenium dioxide (62.2 mg, 0.561 mmol) were heated in dry 1,4-dioxane (2.1 ml) in a microwave oven at 80° C. for 25 min. The cooled mixture was diluted with ethyl acetate and pH was adjusted to 9 with aqueous NaHCO3. The layers were separated. The organic phase was washed with water, dried, evaporated and dried at vacuum. The crude product was purified by flash chromatography on neutral silica gel by using DCM-MeOH as a gradient eluent to give 4.6 mg of the title compound. The stereochemistry of the compound is unknown. 1H NMR (400 MHz, CDCl3): 0.97 (3H, s), 1.13 (3H, s), 2.06 (1H, m), 2.44 (1H, m), 3.10 (3H, s), 4.13 (1H, d), 5.00 (1H, m), 6.12 (1H, m), 7.03 (1H, dd), 7.15 (1H, s), 7.16 (1H, d), 7.55 (1H, d), 7.57 (1H, s).
A mixture of the compound of Example 96(a), 1.50 g, 9.46 mmol), 4-bromo-1H-imidazole (1.95 g, 13.24 mmol), triethylamine (3.3 ml, 2.39 g, 23.64 mmol) and toluene (30 ml) was heated under reflux for 9 h. The mixture was allowed to cool to RT. Water (15 ml) was added and stirring was continued for 30 min. The aqueous phase was extracted with DCM (3×5 ml). The combined organic phases were washed with water (10 ml) and brine (10 ml), dried, filtered and concentrated to give the crude product which was dried under vacuum overnight. The crude product was purified by flash chromatography on silica gel by using DCM-MeOH as a gradient eluent to give 760 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.18 (6H, s), 2.03 (2H, t), 2.83 (2H, td), 6.04 (1H, t), 7.25 (1H, d), 7.79 (1H, d).
Ammonia (2 M solution in IPA, 4.94 ml, 9.88 mmol) was slowly added to the compound of Example 246(a) (760 mg, 2.82 mmol) in IPA at 0° C. under N2. After 10 min titanium(IV)isopropoxide (1.67 ml, 1.61 g, 5.65 mmol) was added at 0° C. Stirring was continued at RT overnight. Then sodium borohydride (107 mg, 2.82 mmol) was added at 0° C. and stirring was continued for 10 min at 0° C. and at RT overnight. Ammonia (1 M aqueous solution, 10 ml) was added. The product was extracted into DCM. The combined organic extracts were washed with water, dried and concentrated. The residue was purified by silica gel flash chromatography (the gradient eluent DCM-MeOH 100:0-90:10) to obtain 350 mg of the title compound. 1H NMR (400 MHz, CDCl3): δ0.90 (3H, s), 1.02 (3H, s), 1.54-1.61 (1H, m), 1.68-1.74 (1H, m), 2.32 (2H, m), 3.18 (1H, m), 5.70 (1H, m), 7.10 (1H, d), 7.56 (1H, d).
The compound was prepared as in Example 131(a) starting from 4-fluoro-2-(trifluoromethyl)benzonitrile and the compound of Example 246(b). The mixture was heated at 100° C. for 10 h. The crude product was crystallized in IPA. Yield 44%. 1H NMR (400 MHz, CDCl3): δ 1.02 (3H, s), 1.12 (3H, s), 1.79 (2H, m), 2.51 (2H, m), 4.02 (1H, m), 4.42 (1H, d), 5.63 (1H, m), 6.77 (1H, dd), 6.93 (1H, d), 7.10 (1H, d), 7.57 (1H, d), 7.58 (1H, d).
The compound of Example 246(c) (252 mg, 0.574 mmol) in 1.5 ml of dry DMF was added to sodium hydride (60% dispersion in mineral oil washed with pentane, 45.9 mg, 1.15 mmol) in 1 ml of dry DMF at 0° C. under N2. The mixture was allowed to stir at 0° C. for 30 min. Then iodomethane (0.061 ml, 138 mg, 0.975 mmol) was added at 0° C. The mixture was maintained at 0° C. for 30 min and quenched with 3 ml of saturated aqueous NH4Cl solution and 9 ml of water. The product was extracted into EtOAc (3×5 ml). The combined organic layers were washed with water (3×5 ml) and brine (1×5 ml), dried, filtered and evaporated to afford the title product. Yield 181 mg, 70%. 1H NMR (400 MHz, CDCl3): δ0.97 (3H, s), 1.10 (3H, s), 1.78 (2H, m), 2.47-2.55 (1H, m), 2.60-2.68 (1H, m), 2.96 (3H, s), 4.54 (1H, m), 5.64 (1H, m), 6.93 (1H, dd), 7.08 (1H, d), 7.15 (1H, d), 7.62 (1H, d), 7.62 (1H, d).
Tetrabutyl ammonium iodide (6.1 mg, 0.017 mmol), the compound of Example 246(d) (150 mg, 0.331 mmol), 0.7 ml of DMF and palladium(II) acetate (2.2 mg, 9.7 μmol) were added to a reaction flask at RT. Then a solution of K3PO4 in water (2 M, 0.33 ml, 0.662 mmol) was added. The mixture was degassed and then filled with argon (three times). Tricyclohexylphosphine (5.6 mg, 0.020 mmol) and diethyl(3-pyridyl)borane (51.1 mg, 0.347 mmol) were added into a reaction flask at RT. The mixture was again degassed and filled with argon. The mixture was stirred and heated at 100° C. for 3 h and cooled to RT. Water (3 ml) and methylene chloride (20 ml) were added. The layers were separated, and the aqueous layer was extracted with methylene chloride (20 ml). The combined organic layers were filtered through Celite, washed with water, dried, filtered and evaporated. The crude product was purified by silica gel flash chromatography (the gradient eluent DCM-MeOH) to give 39 mg of the title product. 1H NMR (400 MHz, CDCl3): 1.00 (3H, s), 1.13 (3H, s), 1.76-1.88 (2H, m), 2.56-2.66 (1H, m), 2.69-2.78 (1H, m), 3.01 (3H, s), 4.58 (1H, m), 5.73 (1H, m), 6.96 (1H, dd), 7.11 (1H, d), 7.33 (1H, m), 7.52 (1H, d), 7.63 (1H, d), 7.83 (1H, d), 8.11 (1H, m), 8.51 (1H, dd), 8.98 (1H, m).
The compound was prepared as in Example 131(a) starting from 6-fluoro-2-methylnicotinonitrile and the compound of Example 96(e). The mixture was heated at 100° C. for 3.5 h. Yield 61%. 1H NMR (400 MHz, CDCl3): 1.01 (3H, s), 1.09 (3H, s), 1.76 (2H, t), 2.53 (2H, m), 2.56 (3H, s), 4.58 (1H, broad s), 4.84 (1H, m), 5.66 (1H, m), 6.28 (1H, d), 7.12 (2H, broad s), 7.53 (1H, d), 7.73 (1H, broad s).
The compound was prepared as in Example 246(d) starting from the compound of Example 247(a). The crude product was purified by flash chromatography on silica gel using DCM-MeOH as a gradient eluent (100:0-99:1). Yield 230 mg, 36%. 1H NMR (400 MHz, CDCl3): 0.91 (3H, s), 1.06 (3H, s), 1.74 (2H, m), 2.48-2.58 (1H, m), 2.57 (3H, s), 2.60-2.68 (1H, m), 2.95 (3H, s), 5.62 (1H, m), 5.80 (1H, broad s), 6.36 (1H, d), 7.12 (1H, s), 7.17 (1H, s), 7.59 (1H, d), 7.76 (1H, s).
The compound was prepared as in Example 131(a) starting from 6-fluoro-2-methylnicotinonitrile and the compound of Example 6(e). The mixture was heated at 90° C. for 2.5 h. Yield 36%. 1H NMR (400 MHz, CDCl3): 1.63-1.72 (1H, m), 1.89-2.09 (3H, m), 2.52 (2H, m), 2.57 (3H, s), 4.74 (1H, broad s), 4.98 (1H, d), 5.85 (1H, m), 6.25 (1H, d), 7.10 (1H, s), 7.13 (1H, s), 7.53 (1H, d), 7.71 (1H, s).
The compound was prepared as in Example 246(d) starting from the compound of Example 248(a). Yield 25%. 1H NMR (400 MHz, CDCl3): 1.61 (1H, m), 1.88-2.01 (2H, m), 2.06 (1H, m), 2.41-2.52 (1H, m), 2.57 (3H, s), 2.56-2.65 (1H, m), 2.91 (3H, s), 5.67 (1H, m), 5.78 (1H, broad s), 6.35 (1H, d), 7.12 (1H, s), 7.15 (1H, s), 7.58 (1H, d), 7.73 (1H, s).
The compound was prepared as in Example 131(a) starting from 2,6-dichloronicotinonitrile and the compound of Example 96(e). The mixture was heated at 100° C. for 1.5 h. The crude product was crystallized in DCM. Yield 38%. 1H NMR (400 MHz, CDCl3): 1.01 (3H, s), 1.09 (3H, s), 1.76 (2H, t), 2.47-2.61 (2H, m), 4.60-4.65 (1H, broad s), 5.17 (1H, d), 5.64 (1H, m), 6.38 (1H, d), 7.09 (1H, s), 7.12 (1H, s), 7.57 (1H, d), 7.69 (1H, s).
The compound was prepared as in Example 246(d) starting from the compound of Example 249(a). The crude product was purified by flash chromatography on silica gel using DCM-MeOH as a gradient eluent (100:0-99:1). Yield 21%. 1H NMR (400 MHz, CDCl3): 0.93 (3H, s), 1.08 (3H, s), 1.75 (2H, t), 2.50-2.58 (1H, m), 2.62-2.69 (1H, m), 2.98 (3H, s), 5.60 (1H, m), 5.66 (1H, broad s), 6.44 (1H, d), 7.14 (1H, s), 7.18 (1H, s), 7.64 (1H, d), 7.77 (1H, s).
215 mg (1.15 mmol) of 6-amino-2-(trifluoromethyl)nicotinonitrile (prepared according to WO 2010/072352) in 70% HF in pyridine (2.7 ml) was chilled in an ice bath and NaNO2 (198 mg, 2.87 mmol) was added in small portions. The mixture was stirred in an ice bath for 3 h and at RT for 3 h. The mixture was poured into ice water and pH was adjusted to 10 with 2 M aqueous NaOH. The product was extracted into EtOAc. The combined organic layers were washed with water and brine, dried, filtered and evaporated. Yield 110 mg, 50%. 1H NMR (400 MHz, CDCl3): 7.32 (1H, dd), 8.30 (1H, dd).
The compound was prepared as in Example 131(a) starting from the compound of Example 250(a) and the compound of Example 96(e). The mixture was heated at 90° C. for 2 h. The crude product was crystallized in DCM. Yield 17%. 1H NMR (400 MHz, CDCl3): 1.01 (3H, s), 1.09 (3H, s), 1.76 (2H, t), 2.48-2.59 (2H, m), 4.6-4.9 (1H, broad s), 5.28 (1H, broad s), 5.66 (1H, m), 6.62 (1H, d), 7.10 (1H, s), 7.12 (1H, s), 7.69 (1H, s), 7.71 (1H, d).
The compound was prepared as in Example 246(d) starting from the compound of Example 250(b). The crude product was purified by flash chromatography on silica gel using DCM-MeOH as a gradient eluent (100:0-99:1). Yield 14%. 1H NMR (400 MHz, CDCl3): 0.92 (3H, s), 1.07 (3H, s), 1.76 (2H, t), 2.52-2.59 (1H, m), 2.62-2.70 (1H, m), 3.02 (3H, s), 5.62 (1H, m), 5.7-5.9 (1H, broad s), 6.68 (1H, d), 7.13 (1H, s), 7.17 (1H, s), 7.76 (1H, s), 7.80 (1H, d).
Ammonia (2 M solution in IPA, 432 ml, 863 mmol) was added slowly to the compound of Example 6(b) (40.00 g, 247 mmol) in IPA at 0° C. under N2. After 20 min titanium(IV) isopropoxide (146 ml, 140 g, 493 mmol) was added at 0° C. and stirring was continued at RT overnight. Then the mixture was cooled to 0° C. Sodium borohydride (9.33 g, 247 mmol) was added in small portions and the resulting mixture was stirred at 0° C. for 30 min and then at RT overnight. The reaction was quenched by adding 1 M aqueous ammonia (480 ml) in an ice bath. The mixture was extracted with DCM (4×400 ml). The combined organic extracts were washed with water (3×), dried and concentrated in vacuum to afford the title compound. Yield: 32.19 g (80%). 1H NMR (400 MHz, CDCl3): δ 1.39-1.46 (1H, m), 1.72-1.83 (1H, m), 1.93 (2H, m), 2.36-2.51 (2H, m)), 3.58 (1H, m), 5.79 (1H, m), 7.07 (1H, s), 7.12 (1H, s) 7.69 (1H, s).
The compound was prepared as in Example 131(a) starting from 2-chloro-4-fluorobenzonitrile and the compound of Example 251(a). The mixture was heated at 100° C. for 6.5 h. The product was partly extracted into EtOAc, partly it crystallized during the work-up and the precipitate was collected by filtration. The crude product was triturated in IPA. Yield 58%. 1H NMR (400 MHz, CDCl3): 1.70-1.76 (1H, m), 1.84-2.04 (3H, m), 2.54 (2H, m), 4.26 (1H, m), 4.44 (1H, d), 5.82 (1H, m), 6.50 (1H, dd), 6.66 (1H, d), 7.11 (1H, s), 7.14 (1H, sd), 7.41 (1H, d), 7.71 (1H, s).
The compound was prepared as in Example 246(d) starting from the compound of Example 251(b). During the work-up a minor part of the product was filtered and a major part of the product was extracted into EtOAc. The filtered product was washed with heptane and the extracted product was triturated in heptane. Yield 76%. 1H NMR (400 MHz, CDCl3): 1.63-1.72 (1H, m), 1.84-1.96 (1H, m), 1.98-2.04 (1H, m), 2.06-2.14 (1H, m), 2.49-2.56 (1H, m), 2.57-2.67 (1H, m), 2.90 (3H, s), 4.67 (1H, m), 5.72 (1H, m), 6.66 (1H, dd), 6.78 (1H, d), 7.12 (1H, s), 7.16 (1H, s), 7.44 (1H, d), 7.74 (1H, s).
The compound was prepared as in Example 131(a) starting from 4-fluoro-2-methoxybenzonitrile and 3-(1H-imidazol-1-yl)-6,6-dimethylcyclohex-2-enamine (prepared as in Example 251(a)). The mixture was heated at 100-115° C. for 16 h. The crude product was stirred in IPA overnight. The precipitation was filtered off and the mother liquor was evaporated. The residue was purified by flash chromatography on silica gel using DCM-MeOH as a gradient eluent (100:0-99:1). Yield 16%. 1H NMR (400 MHz, CDCl3): 1.03 (3H, s), 1.12 (3H, s), 1.72-1.83 (2H, m), 2.45-2.62 (2H, m), 3.88 (3H, s), 3.97 (1H, m), 4.13 (1H, d), 5.65 (1H, m), 6.12 (1H, d), 6.23 (1H, dd), 7.09 (1H, s), 7.12 (1H, s), 7.33 (1H, d), 7.70 (1H, s).
The compound was prepared as in Example 246(d) starting from the compound of Example 252(a). The crude product was purified by flash chromatography on silica gel using DCM-MeOH as a gradient eluent (100:0-99:1). The additional purification was performed by preparative HPLC (X-Bridge Shield RP18 19 mm×250 mm 5 μm OBD, A H2O+0.2% NH4OH, B ACN+0.2% NH4OH, B % 40-53-95 1-13-14 min, flow 30 ml/min, λ 300 nm and 213 nm) to yield the title compound (rt 8-10 min). Yield 4%. 1H NMR (400 MHz, CDCl3): 0.98 (3H, s), 1.10 (3H, s), 1.69-1.84 (2H, m), 2.49-2.58 (1H, m), 2.62-2.70 (1H, m), 2.94 (3H, s), 3.91 (3H, s), 4.50 (1H, m), 5.65 (1H, m), 6.24 (1H, d), 6.43 (1H, dd), 7.13 (1H, s), 7.17 (1H, s), 7.35 (1H, d), 7.76 (1H, s).
The compound of Example 22, enantiomer 1, (2.00 g, 5.87 mmol), pyridine 1-oxide (2.62 g, 27.6 mmol) and selenium dioxide (0.65 g, 5.87 mmol) in dry 1,4-dioxane (22 ml) (divided into four batches, 4×500 mg) were heated in a microwave oven at 140° C. for 2 h. The reaction batches were combined, diluted with EtOAc and filtered through Celite. The solution was washed with water, dried, filtered and evaporated. The crude product was purified by flash chromatography on neutral silica gel using DCM-MeOH as a gradient eluent. Yield 516 mg. 1H NMR (400 MHz, CDCl3): δ 1.04 (3H, s), 1.16 (3H, s), 1.86 (1H, dd), 2.15 (1H, dd), 2.89 (3H, s), 4.64 (1H, m), 4.73 (1H, m), 5.69 (1H, d), 6.73 (1H, dd), 6.84 (1H, d), 7.11 (1H, s), 7.17 (1H, s), 7.46 (1H, d), 7.72 (1H, s).
The compound of Example 253(a), enantiomer 1 of diastereomer 1, 430 mg, 1.21 mmol), 4-nitrobenzoic acid (1.44 g, 8.60 mmol) and triphenylphosphine (2.51 g, 9.57 mmol) in 55 ml of dry toluene were stirred at RT for 30 min under N2. Diethyl azodicarboxylate in 15 ml of dry toluene was added at RT. The mixture was stirred at RT overnight. Then EtOAc (100 ml) was added. The organic solution was washed with aqueous 1 M Na2CO3 solution (3×100 ml), water (1×100 ml), brine (1×100 ml), dried and evaporated. The crude product was purified by flash chromatography on neutral silica gel using DCM-MeOH as a gradient eluent (100:0-97:3). The impure residue was dissolved in the mixture of methanol (20 ml) and water (5 ml) and the solution was cooled to 0° C. Potassium carbonate (833 mg) was added and the mixture was stirred at 0° C. for 1 h. Then EtOAc (100 ml) was added. The organic solution was washed twice with aqueous 1 M Na2CO3 solution and brine, dried, filtered and evaporated. The crude product was purified by flash chromatography on silica gel using DCM-MeOH as a gradient eluent (99:1-90:10). The purified product was triturated in diethyl ether. Yield: 21.3 mg. 1H NMR (400 MHz, CDCl3): 1.05 (3H, s), 1.14 (3H, s), 1.91 (1H, m), 2.04 (1H, m), 3.00 (3H, s), 4.43 (1H, m), 4.62 (1H, m), 5.68 (1H, d), 6.71 (1H, dd), 6.82 (1H, s), 7.03 (1H, d), 7.18 (1H, s), 7.44 (1H, d), 7.66 (1H, s).
The compound of Example 6 (17.00 g, 49.1 mmol) was oxidized as in Example 253(a) at 140° C. for 1.5 h. The crude product (diastereomer 1) was triturated in DCM-MeOH (10:1). Yield: 2.22 g, 12%. 1H NMR (400 MHz, DMSO-d6): 1.64-1.73 (1H, m), 1.77-1.87 (1H, m), 1.93-1.98 (1H, m), 2.07-2.15 (1H, m), 2.89 (3H, s), 4.65 (1H, m), 4.93 (1H, m), 5.36 (1H, d), 5.89 (1H, d), 6.96 (1H, s), 7.16-7.19 (2H, m), 7.47 (1H, s), 7.82 (1H, d), 7.93 (1H, s). The enantiomers of diastereomer 1 were separated by preparative chiral HPLC (Column Chiralpak IA 20 mm×250 mm 5 μm, A n-hexane+0.2% DEA, B EtOH+0.2% DEA, isocratic B 20%, flow 20 ml/min, λ 300 nm) to yield enantiomer 1 (rt 12.0 min) and enantiomer 2 (rt 14.5 min). The enantiomer 1: 1H NMR (400 MHz, MeOH-d4): 1.70-1.86 (2H, m), 1.96-2.03 (1H, m), 2.16-2.24 (1H, m), 2.87 (3H, s), 4.62 (1H, m), under the water signal (1H), 5.88 (1H, d), 6.93 (1H, s), 7.02 (1H, dd), 7.06 (1H, d), 7.32 (1H, s), 7.60 (1H, d), 7.86 (1H, s). The 1H NMR spectrum of enantiomer 2 was identical with the former one.
Inversion of the OH bond of the compound of Example 254(a), diastereomer 1, (2.02 g, 5.59 mmol), and the following hydrolysis were performed as in Example 253(b). The crude product (diastereomer 2) was triturated in DCM. Yield: 640 mg. 1H NMR (400 MHz, DMSO-d6): 1.66-1.73 (1H, m), 1.84-2.02 (3H, m), 2.92 (3H, s), 4.50 (1H, m), 4.88-4.93 (1H, m), 5.51 (1H, d), 5.95 (1H, d), 6.97 (1H, s), 7.16-7.21 (2H, m), 7.56 (1H, s), 7.81 (1H, d), 8.01 (1H, s).
The compound of Example 251 (2.00 g, 6.39 mmol) was oxidized as in Example 254(a) at 140° C. for 1.5 h. The crude product (diastereomer 1) was triturated in DCM-MeOH (10:1). Yield: 340 mg, 16%. 1H NMR (400 MHz, DMSO-d6): 1.62-1.70 (1H, m), 1.75-1.86 (1H, m), 1.90-1.97 (1H, m), 2.06-2.14 (1H, m), 2.83 (3H, s), 4.64 (1H, m), 4.84 (1H, m), 5.35 (1H, d), 5.88 (1H, d), 6.91 (1H, dd), 6.95 (1H, s), 7.05 (1H, d), 7.47 (1H, s), 7.64 (1H, d), 7.92 (1H, s). The enantiomers of the diastereomer 1 were separated by preparative chiral HPLC (Column Chiralpak IA 20 mm×250 mm 5 μm, A n-hexane+0.2% DEA, B EtOH+0.2% DEA, isocratic B 20%, flow 20 ml/min, λ 300 nm) to yield enantiomer 1 (rt 16.3 min) and enantiomer 2 (rt 19.7 min). The 1H NMR spectra of the enantiomers were identical with the spectrum of the diastereomer 1.
Inversion of the OH bond of the compound of Example 255(a), diastereomer 1, (1.51 g, 4.59 mmol) and the following hydrolysis were performed as in Example 253(b). The crude product (diastereomer 2) was triturated in DCM. Yield 323 mg. 1H NMR (400 MHz, DMSO-d6): 1.64-1.71 (1H, m), 1.82-2.00 (3H, m), 2.86 (3H, s), 4.50 (1H, m), 4.81 (1H, m), 5.50 (1H, d), 5.93 (1H, d), 6.91 (1H, dd), 6.97 (1H, s), 7.07 (1H, d), 7.56 (1H, s), 7.63 (1H, d), 8.01 (1H, s).
A mixture of cyclohexane-1,3-dione (25 g, 223 mmol), isobutanol (125 ml) and p-toluenesulfonic acid monohydrate (2.12 g, 11.15 mmol) in benzene (500 ml) was heated at 100° C. for 16 h. The mixture was concentrated under reduced pressure, poured into water (250 ml) and extracted with EtOAc (2×250 ml). The organic layer was dried, filtered and concentrated to obtain the crude compound which was purified by flash column chromatography using 230-400 mesh silica gel and eluted with 20% EtOAc in petroleum ether to afford the title compound. Yield: 20 g. LC-MS: m/z=169.2 (M+1)+
To a solution of the compound of Example 256(a) (12 g, 71.33 mmol) and hexamethylphosphoramide (12.41 ml, 71.33 mmol) in dry THF (250 ml) was added 2 M lithium diisopropylamide in THF (39.23 ml, 78.46 mmol) at −78° C. dropwise followed by stirring at this temperature for 1 h. Then MeI (4.89 ml, 78.46 mmol) was added at −78° C. dropwise, the mixture was allowed to warm to RT and stirred for 16 h. The mixture was poured into ice cold water (100 ml) and extracted with EtOAc (2×150 ml). The organic layer was dried, filtered and concentrated to obtain the crude compound which was purified by flash column chromatography using 230-400 mesh silica gel and eluted with 15% EtOAc in petroleum ether to afford the title compound. Yield: 7.1 g. LC-MS: No ionization.
Aqueous HCl (1 N, 70 ml) was added to a cold stirred solution of the compound of Example 256(b) (7.1 g, 38.95 mmol) in acetone (70 ml). The solution was allowed to warm to RT and stirred for 16 h. The mixture was concentrated under reduced pressure and poured into water (70 ml) and extracted with EtOAc (2×200 ml). The organic layer was dried, filtered and concentrated to afford the crude compound which was purified by flash column chromatography using 230-400 mesh silica gel and eluted with 80% EtOAc in petroleum ether to afford the title compound. Yield 3.5 g.
Triphenyl phosphine (8.00 g, 30.52 mmol) was added to a stirred solution of iodine (7.75 g, 30.52 mmol) in ACN (35 mL) at RT and stirring was continued for 30 min. Then Et3N (4.23 ml, 30.52) was added followed by the compound of Example 256(c) (3.5 g, 27.74 mmol) in ACN (35 ml). Stirring was continued at RT for 1 h and heated to reflux for 16 h. The mixture was concentrated, poured into water (100 ml) and extracted with Et2O (2×100 ml) The organic layer was dried, filtered and concentrated to obtain the crude compound which was purified by flash column chromatography using 230-400 mesh silica gel and eluted with 8% EtOAc in petroleum ether to afford the title compound. Yield: 2.2 g. LC-MS: No ionization.
Et3N (0.70 ml, 5.08 mmol), KHCO3 (0.34 g, 3.39 mmol) and imidazole (0.69 g, 10.17 mmol) were added to a stirred solution of the compound of Example 256(d) (0.8 g, 3.39 mmol) in toluene (20 ml) and the resulting mixture was heated at reflux temperature for 16 h. Then the mixture was concentrated, poured into water (50 ml) and extracted with 5% MeOH in DCM (2×75 ml). The organic layer was dried and concentrated to obtain the crude compound which was purified by flash column chromatography using 230-400 mesh silica gel and eluted with 4% MeOH in DCM to afford the title compound. Yield: 0.3 g. LC-MS: m/z=177.1 (M+1)+.
Ammonia (5 M solution in IPA, 80 ml) was added to a cold stirred solution of the compound of Example 256(e) (4 g, 22.70 mmol) in IPA (80 ml), followed by dropwise addition of Ti(iOPr)4 (13.51 ml, 45.40 mmol). The mixture was allowed to warm to RT and stirred for 4 h. The mixture was again cooled to 0° C., sodium borohydride (2.58 g, 68.10 mmol) was added and the mixture was allowed to warm to RT and stirred for 16 h. The mixture was poured into ice cold water (50 ml) and extracted with 5% MeOH in DCM (2×75 ml). The organic layer was dried, filtered and concentrated to afford the title compound which was directly used to the next step without any further purification. Yield: 4 g (crude).
Et3N (7.82 ml, 56.41 mmol) was added to a cold stirred solution of the compound of Example 256(f) (4.00 g (crude), 22.57 mmol) in DCM (80 ml) followed by addition of Boc2O (7.78 ml, 33.85 mmol). The mixture was allowed to warm to RT and stirred for 16 h. The mixture was poured into water (100 ml) and extracted with DCM (2×100 ml). The organic layer was dried, filtered and concentrated to afford the crude compound which was purified by flash column chromatography using 230-400 mesh silica gel and eluted with 2% MeOH in DCM to afford the title compound. Yield: 1.9 g. Four enantiomers were isolated by using preparative chiral chromatography. Preparative SFC conditions: Column Chiralcel OZ—H 30 mm×250 mm 5 μm, CO2 85%, Co solvent 0.5% DEA in MeOH 15%, total flow 70.0 g/min, back pressure 100 bar, T 24° C., λ 229 nm, stack time 12 min). Analytical SFC conditions: Column Chiralcel OZ—H 4.6 mm×250 mm 5 μm, CO2 80%, Co solvent 0.5% DEA in MeOH 20%, total flow 3.0 g/min, back pressure 100 bar, T 25.6° C., λ 229 nm): Enantiomer 1 (rt 3.19 min), enantiomer 2 (rt 3.74 min), enantiomer 3 (rt 4.33 min) and enantiomer 4 (rt 6.92 min). All enantiomers have identical LC-MS: m/z=278.2 (M+1)+.
5 M HCl in dioxane (20 ml) was added to a cold stirred solution of enantiomer 1 of the compound of Example 256(g) (0.60 g, 2.16 mmol) in 1,4-dioxane (10 ml). The solution was allowed to warm to RT and stirred for 6 h. The mixture was concentrated to afford crude compound which was triturated with anhydrous Et2O to afford enantiomer 1 of the title compound as a dihydrochloride salt. Yield 0.46 g. Similarly the dihydrochloride salts of enantiomer 2, 3 and 4 were synthesized.
A reaction flask was charged with the compound of Example 256(h), enantiomer 2, (180.4 mg, 0.721 mmol), 2.85 ml of dry DMSO, 4-fluoro-2-(trifluoromethyl)benzonitrile (160 mg, 0.844 mmol) and DIPEA (0.735 ml, 546 mg, 4.22 mmol). The mixture was heated at 100° C. for 5.5 h. Then the cooled mixture was poured into EtOAc (10 ml) and water (12 ml) was added. The phases were separated and the water phase was extracted with EtOAc (2×15 ml). The combined organic layers were washed with water (2×10 ml) and brine (1×10 ml), dried, filtered and evaporated. The residue (206 mg) was purified by Combiflash on silica gel using DCM-MeOH as a gradient eluent (100:0-90:10) to afford the title product, enantiomer 2. Yield 98.4 mg. 1H NMR (400 MHz, CDCl3): 1.02 (3H, d), 1.71-1.82 (1H, m), 1.83-1.91 (1H, m), 2.16-2.25 (1H, m), 2.50-2.57 (2H, m), 4.32 (1H, m), 5.07 (1H, d), 5.79 (1H, m), 6.81 (1H, dd), 6.98 (1H, d), 7.08 (1H, s), 7.13 (1H, s), 7.54 (1H, d), 7.67 (1H, s). Similarly the enantiomer 4 of the title compound was synthesized starting from enantiomer 4 the compound of Example 256(h). Yield 41%. The 1H NMR spectrum was identical with one of the enantiomer 2. Similarly the enantiomer 1 of the title compound was synthesized starting from enantiomer 1 the compound of Example 256(h). Yield 65%. 1H NMR (400 MHz, CDCl3): 1.14 (3H, d), 1.66-1.76 (1H, m), 1.83 (1H, m), 2.04 (1H, m), 2.53-2.57 (2H, m), 3.89 (1H, m), 4.69 (1H, d), 5.71 (1H, m), 6.74 (1H, dd), 6.91 (1H, d), 7.07 (1H, s), 7.12 (1H, s), 7.55 (1H, d), 7.67 (1H, s). Similarly the enantiomer 3 of the title compound was synthesized starting from enantiomer 3 the compound of Example 256(h). Yield 52%. The 1H NMR spectrum was identical with the enantiomer 1.
The compound of Example 256(i), enantiomer 2, (68 mg, 0.196 mmol) in 1 of dry DMF was added to sodium hydride (60% dispersion in mineral oil, 15.7 mg, 0.393 mmol) in 1 ml of dry DMF at 0° C. under N2. The mixture was allowed to stir at 0° C. for 30 min. Then iodomethane (0.018 ml, 41.8 mg, 0.295 mmol) was added at 0° C. The mixture was maintained at 0° C. for 1 h and quenched with saturated aqueous NH4Cl solution and water. The product was extracted into EtOAc (4×). The combined organic layers were washed with water (3×) and brine (1×), dried, filtered and evaporated to afford the crude product. The residue was purified by Combiflash on silica gel using DCM-MeOH as a gradient eluent (100:0-90:10) to afford the enantiomer 2 of the title compound. Yield: 29.4 mg. 1H NMR (400 MHz, CDCl3): 0.95 (3H, d), 1.80-1.89 (1H, m), 1.94-2.02 (1H, m), 2.31-2.40 (1H, m), 2.48-2.58 (1H, m), 2.67-2.77 (1H, m), 3.00 (3H, s), 4.83 (1H, m), 5.72 (1H, m), 6.91 (1H, dd), 7.05 (1H, d), 7.14 (1H, s), 7.18 (1H, s), 7.62 (1H, d), 7.77 (1H, s). Similarly the enantiomer 4 of the title compound was synthesized starting from the enantiomer 4 of the compound of Example 256(i). Yield 26%. The 1H NMR spectrum was identical with one of the enantiomer 2. Similarly the enantiomer 1 of the title compound was synthesized starting from the enantiomer 1 of the compound of Example 256(i). Yield 41%. 1H NMR (400 MHz, CDCl3): 0.98 (3H, d), 1.69-1.80 (1H, m), 1.93-2.03 (1H, m), 2.03-2.1 (1H, m), 2.53-2.61 (1H, m), 2.63-2.75 (1H, m), 2.92 (3H, s), 4.37 (1H, m), 5.61 (1H, m), 6.90 (1H, dd), 7.05 (1H, d), 7.11 (1H, s), 7.14 (1H, s), 7.60 (1H, d), 7.72 (1H, s). Similarly the enantiomer 3 of the title compound was synthesized starting from the enantiomer 3 of the compound of Example 256(i). Yield 24%. The 1H NMR spectrum was identical with the enantiomer 1.
The compound was prepared as in Example 136(d) from 4-((3-(1-ethyl-1H-imidazol-5-yl)cyclopent-3-en-1-yl)amino)-2-(trifluoromethyl)benzonitrile (0.20 g, 0.577 mmol) and (bromomethyl)cyclopropane (84 μl, 0.866 mmol). Extracted with DCM. Yield 117 mg after preparative HPLC. 1H NMR (400 MHz, CDCl3): 0.27 (2H, m), 0.63 (2H, m), 1.00 (1H, m), 1.48 (3H, t), 2.76 (1H, m), 2.92 (1H, m), 3.02 (1H, m), 3.13 (1H, m), 3.31 (2H, m), 4.13 (2H, q), 4.66 (1H, m), 5.87 (1H, m), 6.88 (1H, dd), 7.00 (1H, s), 7.07 (1H, d), 7.51 (1H, d), 7.58 (1H, dd). Enantiomers were separated using chiral preparative HPLC (column: Daicel Chiralpak IA, 20 mm×250 mm, 5 μm particle size, eluent A: n-hexane+0.2% DEA, eluent B: EtOH+0.2% DEA, isocratic elution: 20% B, flow 20 ml/min, detection 300 nm) to afford 31.7 mg of enantiomer 1 (rt 12.1 min) and 32.4 mg enantiomer 2 (rt 15.0 min).
The compound was prepared as in Example 197(a) from 2-chloro-4-iodobenzonitrile (2.63 g, 10 mmol). Yield 2.206 g. 1H NMR (400 MHz, CDCl3): 2.35 (1H, dt), 2.48 (1H, dt), 3.56 (1H, m), 4.87 (1H, m), 6.74 (1H, m), 7.02 (1H, dd), 7.46 (1H, dd), 7.60 (1H, d), 7.66 (1H, d).
The compound was prepared as in Example 197(b) from the compound of Example 258(a) (0.91 g, 3.72 mmol) and sodium borohydride (0.421 g, 11.13 mmol). Reaction was performed at 40° C. Yield 0.593 g after column chromatography. 1H NMR (400 MHz, CDCl3): 1.43 (1H, m), 1.51 (1H, dt), 2.56 (1H, m), 2.95 (1H, m), 3.62 (1H, m), 3.70 (1H, dt), 4.51 (1H, m), 4.70 (1H, d), 5.91 (2H, m), 6.46 (1H, dd), 6.63 (1H, d), 7.36 (1H, d)
The compound was prepared as in Example 183(a) from the compound of Example 258(b) (0.753 g, 3.03 mmol). Yield 0.177 g. 1H NMR (400 MHz, CDCl3): 2.52 (1H, m), 2.59 (1H, m), 3.04 (1H, m), 3.14 (1H, m), 4.27 (1H, m), 4.59 (1H, d), 6.47 (1H, dd), 6.61 (1H, d), 6.87 (1H, m), 7.38 (1H, d), 9.78 (1H, s).
The compound was prepared as in Example 183(b) from the compound of Example 258(c) (0.177 g, 0.717 mmol) and ethylamine (0.717 ml, 1.435 mmol; 2 M in THF). Yield 0.226 g. 1H NMR (400 MHz, CDCl3): 1.46 (3H, t), 2.51 (1H, m), 2.63 (1H, m), 3.08 (1H, m), 3.21 (1H, m), 4.10 (2H, q), 4.23 (1H, m), 4.51 (1H, d), 5.80 (1H, m), 6.47 (1H, dd), 6.63 (1H, d), 7.01 (1H, s), 7.20 (1H, d), 7.49 (1H, d).
The compound was prepared as in Example 136(d) from the compound of Example 258(d) (0.226 g, 0.723 mmol). Extracted with DCM. Yield 102 mg after flash chromatography. 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.48 (3H, t), 2.68 (1H, m), 2.82 (1H, m), 2.97 (1H, m), 3.08 (1H, m), 3.41 (2H, q), 4.13 (2H, q), 4.62 (1H, m), 5.87 (1H, m), 6.60 (1H, dd), 6.74 (1H, d), 7.00 (1H, s), 7.41 (1H, d), 7.50 (1H, d). The enantiomers were separated using chiral preparative HPLC (column: Daicel Chiralpak IA, 20 mm×250 mm, 5 μm particle size, eluent A: n-hexane+0.2% DEA, eluent B: EtOH+0.2% DEA, isocratic elution: 20% B, flow 20 ml/min, detection 300 nm) to afford 33.3 mg of enantiomer 1 (rt 16.1 min) and 35.7 mg of enantiomer 2 (rt 19.0 min).
A mixture of 3-chlorocyclopent-2-enone (0.583 g, 5.0 mmol) and 2H-1,2,3-triazole (1.4 ml, 24.16 mmol) was stirred at RT for 2 days. Water, DCM and brine were added. Phases were separated. The aqueous phase was extracted with DCM. The combined organic phases were dried, filtered and evaporated. Purification by flash chromatography afforded 0.57 g of the title compound. 1H NMR (400 MHz, CDCl3): 2.72 (2H, m), 3.38 (2H, m), 6.41 (1H, t), 7.88 (1H, d), 7.97 (1H, d).
The compound was prepared as in Example 156(b) from the compound of Example 259(a) (0.69 g, 4.63 mmol). Yield 0.632 g. 1H NMR (400 MHz, CDCl3): 1.75 (1H, d), 2.01 (1H, m), 2.58 (1H, m), 2.97 (1H, m), 3.20 (1H, m), 5.09 (1H, m), 6.14 (1H, m), 7.75 (1H, d), 7.81 (1H, d).
The compound was prepared as in Example 156(c) from the compound of Example 259(b) (0.632 g, 4.18 mmol). Reaction was performed in toluene-THF (2.1). Purification by flash chromatography afforded 0.475 g of the title compound. 1H NMR (400 MHz, CDCl3): 2.18 (1H, m), 2.58 (1H, m), 3.05 (1H, m), 3.22 (1H, m), 4.65 (1H, m), 6.11 (1H, m), 7.77 (1H, d), 7.83 (1H, d).
The compound was prepared as in Example 156(d) from the compound of Example 259(c). Yield 0.391 g. 1H NMR (400 MHz, CDCl3): 1.62 (2H, br s), 1.76 (1H, m), 2.58 (1H, m), 2.90-2.99 (1H, m), 3.08-3.17 (1H, m), 4.23 (1H, m), 6.05 (1H, q), 7.74 (1H, d), 7.77 (1H, d).
The compound was prepared as in Example 137(c) from the compound of Example 259(d) (0.391 g, 2.60 mmol). Yield 0.562 g. 1H NMR (400 MHz, CDCl3): 2.00 (1H, m), 2.73 (1H, m), 3.05-3.13 (1H, m), 3.18-3.26 (1H, m), 4.65 (1H, br d), 4.86 (1H, m), 6.15 (1H, q), 6.75 (1H, dd), 6.91 (1H, d), 7.60 (1H, d), 7.78 (1H, d), 7.80 (1H, d).
The compound was prepared as in Example 136(d) from the compound of Example 259(e). (0.562 g, 1.76 mmol). Extracted with DCM. Yield 0.595 g. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.97 (1H, m), 2.73 (1H, m), 3.09 (1H, m), 3.23 (1H, m), 3.44 (2H, m), 5.22 (1H, m), 6.14 (1H, q), 6.88 (1H, dd), 7.04 (1H, d), 7.61 (1H, dd), 7.80 (1H, d), 7.82 (1H, d). The enantiomers were separated using chiral preparative HPLC (column: Daicel Chiralpak IA, 20 mm×250 mm, 5 μm particle size, eluent A: MTBE+0.2% DEA, eluent B: IPA+0.2% DEA, isocratic elution: 3% B, flow 20 ml/min, detection 300 nm) to afford 49.2 mg of enantiomer 1 (rt 18.4 min) and 47.5 mg of enantiomer 2 (rt 25 min).
The compound was prepared as in Example 183(b) from 4-((3-formylcyclopent-3-en-1-yl)amino)-2-(trifluoromethyl)benzonitrile (0.28 g, 1.00 mmol) and 2-amino-2-methyl-1-propanol (0.178 g, 2.00 mmol). Yield 0.129 g. 1H NMR (400 MHz, CDCl3): 1.59 (6H, s), 2.45 (1H, m), 2.57 (1H, m), 3.05 (1H, m), 3.14 (1H, m), 3.77 (2H, m), 4.29 (1H, m), 4.90 (1H, br d), 5.87 (1H, m), 6.70 (1H, dd), 6.83 (1H, d), 6.87 (1H, d), 7.57 (1H, d), 7.59 (1H, d).
tert-Butyldimethylchlorosilane (52 mg, 0.347 mmol) was added to a solution of the compound of Example 260(a) (0.129 g, 0.33 mol) and imidazole (45 mg, 0.661 mmol) in DCM (1 ml). The mixture was stirred at RT overnight. The mixture was diluted with DCM, water was added, and the phases separated. The aqueous phase was extracted with DCM. The combined organic phases were washed with water and brine, dried, filtered and evaporated. Yield 0.149 g.
The compound was prepared as in Example 136(d) from the compound of Example 260(b) (0.149 mg, 0.295 mmol). Extraction with DCM. Yield 62 mg after flash chromatography. 1H NMR (400 MHz, CDCl3): 0.0 (6H, s), 0.85 (9H, s), 1.25 (3H, t), 1.57 (3H, s), 1.58 (3H, s), 2.65 (1H, m), 2.76 (1H, m), 2.90 (1H, m), 3.01 (1H, m), 3.49 (2H, q), 3.73 (2H, m), 4.67 (1H, m), 5.91 (1H, m), 6.81 (1H, dd), 6.90 (1H, d), 6.98 (1H, d), 7.58 (1H, dd), 7.66 (1H, d).
A mixture of the compound of Example 260(c) (68 mg, 0.128 mmol) and ammonium fluoride (47 mg, 1.276 mmol) in methanol (1.5 ml) was stirred at 50° C. for 7 h. Then more ammonium fluoride (47 mg, 1.276 mmol) was added and stirring continued for 5 h at 50° C. and 8 h at 60° C. The mixture was concentrated in vacuo. Water and DCM were added and the phases separated. The aqueous phase was extracted with DCM. The combined organic phases were washed with water and brine, dried, filtered and evaporated. Purification by preparative HPLC afforded 28 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.25 (3H, t), 1.605 (3H, s), 1.61 (3H, s), 2.66 (1H, m), 2.75 (1H, m), 2.90 (1H, m), 3.02 (1H, m), 3.49 (2H, q), 3.78 (2H, m), 4.67 (1H, m), 5.94 (1H, m), 6.80 (1H, br s), 6.81 (1H, dd), 7.55 (1H, br s), 7.58 (1H, d). LC-MS: m/z=419.2 (M+1).
The compound was prepared as in Example 183(b) from 4-((3-formylcyclopent-3-en-1-yl)amino)-2-(trifluoromethyl)benzonitrile (0.168 g, 0.60 mmol) and tert-butyl 2-aminoethyl(phenyl)carbamate (prepared as in EP 301751) (0.173 g, 0.732 mmol). Yield 0.109 g. 1H NMR (400 MHz, CDCl3): 1.37 (9H, s), 2.47 (1H, d), 2.56 (1H, d), 2.95 (1H, m), 3.13 (1H, m), 3.78 (1H, m), 4.22 (4H, m), 5.55 (1H, br s), 5.75 (1H, br s), 6.68 (1H, dd), 6.86 (1H, d), 6.96 (1H, br s), 6.98 (1H, d), 7.23 (1H, m), 7.32 (3H, m), 7.55 (1H, d).
The compound was prepared as in Example 136(d) from the compound of Example 261(a). Extracted with DCM. Yield 82 mg after flash chromatography. 1H NMR (400 MHz, CDCl3): 1.18 (3H, t), 1.40 (9H, s), 2.55 (1H, m), 2.72 (1H, m), 2.85 (1H, m), 2.94 (1H, m), 3.37 (2H, q), 3.95 (2H, t), 4.32 (2H, m), 4.57 (1H, m), 5.69 (1H, br s), 6.76 (1H, dd), 6.94 (1H, d), 6.96 (3H, br s), 7.21 (1H, m), 7.30 (2H, m), 7.44 (1H, d), 7.54 (1H, dd).
Trimethylsilyl trifluoromethanesulfonate (91 μl, 0.502 mmol) was added to the compound of Example 261(b) (71 mg, 0.126 mmol) and 2,6-dimethylpyridine (73 μl, 0.628 mmol) in DCM (1.5 ml) at 0-5° C. The mixture was stirred at 0-5° C. for 15 min at RT until completion. The mixture was diluted with DCM and the reaction quenched with cold saturated NH4Cl. Phases were separated and the aqueous phase was extracted with DCM. The combined organic phases were washed with saturated NaHCO3 and brine, dried, filtered and evaporated. Purification by preparative HPLC afforded 22 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 2.65 (1H, m), 2.82 (1H, m), 2.92 (1H, m), 3.06 (1H, m), 3.43 (2H, q), 3.56 (2H, q), 3.73 (1H, t), 4.29 (2H, m), 4.61 (1H, m), 5.85 (1H, m), 6.60 (2H, m), 6.78 (2H, m), 6.97 (1H, d), 7.03 (1H, br s), 7.21 (2H, m), 7.44 (1H, d), 7.57 (1H, dd).
A mixture of (R)-4-((3-(1H-imidazol-1-yl)-6,6-dimethylcyclohex-2-en-1-yl)(methyl)amino)-2-(trifluoromethyl)benzonitrile (0.40 g, 1.068 mmol), selenium dioxide (83 mg, 0.748 mmol) and pyridine N-oxide (0.508 g, 5.34 mmol) in 1,4-dioxane (4.5 ml) was heated for 2 h at 160° C. in a microwave synthesizer (Biotage Initiator). The cooled mixture was diluted with EtOAc and filtered through Celite. The filter cake was washed with EtOAc and the filtrate evaporated. The residue was re-dissolved in EtOAc and washed with water and brine, dried, filtered and evaporated. Purification by flash chromatography afforded 57 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.05 (3H, s), 1.16 (3H, s), 1.90 (1H, dd), 2.16 (1H, dd), 2.94 (3H, s), 4.71 (1H, m), 4.74 (1H, m), 5.69 (1H, m), 6.95 (1H, dd), 7.07 (1H, m), 7.09 (1H, d), 7.16 (1H, t), 7.62 (1H, d), 7.66 (1H, m).
The compound was prepared as in Example 137(c) from 3-(1H-imidazol-1-yl)-6,6-dimethylcyclohex-2-enamine (1.58 g), 8.26 mmol), 2-bromo-4-fluorobenzonitrile (1.735 g, 8.67 mmol) and DIPEA (3.6 ml, 20.65 mmol) in DMSO (20 ml) at 100° C. Extraction was performed with EtOAc. Yield 1.34 g. 1H NMR (400 MHz, CDCl3): 1.01 (3H, s), 1.11 (3H, s), 1.76 (2H, m), 2.54 (2H, m), 3.95 (1H, m), 4.33 (1H, br d), 5.62 (1H, m), 6.58 (1H, dd), 6.88 (1H, d), 7.09 (1H, m), 7.12 (1H, t), 7.39 (1H, d), 7.69 (1H, t).
The compound was prepared as in Example 136(d) from the compound of Example 263(a) (93 mg, 0.25 mmol) and iodomethane (28 μl, 0.45 mmol). Extracted with DCM. Purification by preparative HPLC afforded 53 mg of the title compound. 1H NMR (400 MHz, CDCl3): 0.96 (3H, s), 1.10 (3H, s), 1.76 (2H, m), 2.50-2.59 (1H, m), 2.62-2.70 (1H, m), 2.92 (3H, s), 4.47 (1H, m), 5.63 (1H, m), 6.77 (1H, dd), 7.01 (1H, d), 7.12 (1H, m), 7.17 (1H, t), 7.43 (1H, d), 7.75 (1H, t). The enantiomers of the title compound (172 mg) were separated using chiral preparative HPLC (Column: Daicel Chiralpak IA, 20 mm×250 mm, 5 μm particle size, eluent A: MTBE+0.2% DEA, eluent B: EtOH+0.2% DEA, isocratic elution: 10% B, flow 20 m/min, detection 300 nm) to afford 63 mg of enantiomer 1 (rt 12.5 min) and 60 mg of enantiomer 2 (rt 37 min).
The compound was prepared as in Example 136(d) from 4-(3-(1-ethyl-1H-imidazol-5-yl)cyclopent-3-enylamino)-2-(trifluoromethyl)benzonitrile (57 mg, 0.165 mmol) and 2-bromoethyl methyl ether (34 μl, 0.362 mmol) with catalytic amount of tetra-butylammmonium iodide (15 mg, 0.041 mmol). Extraction with DCM. Purification by preparative HPLC afforded 15 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.48 (3H, t), 2.73 (1H, m), 2.89 (1H, m), 3.00 (1H, m), 3.11 (1H, m), 3.35 (3H, s), 3.57 (4H, m), 4.12 (2H, q), 4.68 (1H, m), 5.87 (1H, m), 6.85 (1H, dd), 7.00 (1H, br s), 7.06 (1H, d), 7.51 (1H, br s), 7.58 (1H, dd).
To a stirred solution of 3-iodo-6,6-dimethylcyclohex-2-enone (3.0 g, 12.0 mmol) in DMF (40 ml) was added trimethylsilylacetylene (3.5 g, 36.0 mmol) followed by diisopropylamine (3.63 g, 36.0 mmol), Pd(pph3)2Cl2 (0.42 g, 0.6 mmol) and CuI (0.228 g, 1.2 mmol) at 0° C. The resulting suspension was stirred at RT for 16 h. The reaction mixture was quenched with ice water and extracted with EtOAc. Organic layer was washed with water, brine, dried and evaporated. Purification by flash chromatography afforded 1.0 g of the title compound. 1H NMR (300 MHz, CDCl3): 0.22 (9H, s), 1.11 (6H, s), 1.84 (2H, t), 2.48 (2H, m), 6.14 (1H, s).
To an ice cold stirred solution of the compound of Example 265(a) (3.0 g, 13.63 mmol) in EtOH (20 ml) was added potassium carbonate (3.77 g, 27.27 mmol). The mixture was stirred for 4 h at 0° C. Water (20 ml) was added to the mixture together with CuSO4.H2O (1.51 g, 6.08 mmol), benzylazide (2.7 g, 20.27 mmol) and sodium ascorbate (1.60 g, 8.10 mmol). The mixture was allowed to warm to RT and stirred for 16 h. The reaction mixture was quenched with saturated Na2CO3 solution and extracted with EtOAc. Organic layer was washed with water, dried and evaporated. Purification by flash chromatography afforded 1.2 g of the title compound. 1H NMR (300 MHz, CDCl3): 1.14 (6H, s), 1.94 (2H, t), 2.87 (2H, m), 5.54 (2H, s), 6.40 (1H, s), 7.3 (2H, m), 7.4 (3H, m), 7.63 (1H, s).
The compound was prepared as in Example 156(b) from the compound of Example 265(b) (4.0 g, 16.0 mmol) using CeCl3.7H2O (7.45 g, 20.0 mmol) and NaBH4 (0.76 g, 20.0 mmol). Purification by flash chromatography afforded 2.0 g of the title compound. 1H NMR (300 MHz, DMSO-d6): 0.81 (3H, s), 0.92 (3H, s), 1.41 (1H, m), 1.56 (1H, m), 2.27 (2H, m), 3.76 (1H, m), 4.65 (1H, d), 6.22 (1H, m), 7.27-7.39 (5H, m), 8.20 (1H, s).
The compound was prepared as in Example 184(c) from the compound of Example 265(c) (2.0 g, 7.93 mmol), DPPA (3.27 g, 11.9 mmol) and DBU (2.4 g, 15.87 mmol) in toluene. Yield: 0.8 g. 1H NMR (300 MHz, DMSO-d6): 0.93 (3H, s), 0.97 (3H, s), 1.53 (2H, m), 2.38 (2H, m), 3.89 (1H, m), 5.58 (2H, d), 6.38 (1H, m), 7.26-7.49 (5H, m), 8.32 (1H, s).
To a stirred solution of the compound of Example 265(d) (2.0 g, 6.48 mmol) in THF—H2O (15 ml, 2:1) was added PPh3 (0.85 g, 3.24 mmol) at RT and the resulting mixture was refluxed for 4 h. The reaction mixture was quenched with ice cold water and extracted with EtOAc. Organic layer was washed with water, dried and evaporated. Purification by flash chromatography afforded 0.5 g of the title compound. 1H NMR (300 MHz, DMSO-d6): 0.82 (3H, s), 0.97 (3H, s), 1.24 (2H, s), 1.45 (1H, m), 1.57 (1H, m), 2.29 (2H, m), 3.21 (1H, m), 5.56 (2H, s), 6.21 (1H, m), 7.29-7.38 (5H, m), 8.20 (1H, s).
The compound was prepared as in Example 137(c) from the compound of Example 265(e) (0.26 g, 0.921 mmol) at 100° C. Yield 0.20 g. 1H NMR (400 MHz, CDCl3): 0.97 (3H, s), 1.07 (3H, s), 1.68 (2H, t), 2.45 (2H, m), 3.95 (1H, m), 4.37 (1H, br d), 5.51 (2H, s), 6.21 (1H, m), 6.74 (1H, dd), 6.90 (1H, d), 7.24-7.40 (6H, m), 7.54 81H, d)
The compound was prepared as in Example 136(d) from the compound of Example 265(f) (0.20 g, 0.443 mmol). Extraction with DCM. Purification by preparative HPLC afforded 83 mg of the title compound. 1H NMR (400 MHz, CDCl3): 0.92 (3H, s), 1.05 (3H, s), 1.67 (2H, m), 2.42 (1H, m), 2.58 (1H, m), 2.94 (3H, s), 4.47 (1H, m), 5.53 (2H, m), 6.24 (1H, m), 6.91 (1H, dd), 7.06 (1H, d), 7.29 (2H, m), 7.34-7.42 (4H, m), 7.58 (1H, dd).
Potassium tert-butoxide (0.127 g, 1.128 mmol) was added the compound of Example 265(g) (75 mg, 0.161 mmol) in DMSO-THF (0.2 ml-2 ml). Oxygen was bubbled through the mixture for 1 h and then the mixture was stirred overnight in an open flask. Reaction was quenched with saturated NH4Cl and water, extracted with EtOAc. Organic phases were washed with water and brine, dried, filtered and evaporated. Purification by preparative HPLC afforded 8 mg of the title compound. 1H NMR (400 MHz, CDCl3): 0.96 (3H, s), 1.08 (3H, s), 1.72 (2H, m), 2.53 (1H, m), 2.67 (1H, m), 2.97 (3H, s), 4.51 (1H, m), 6.18 (1H, m), 6.94 (1H, dd), 7.09 (1H, d), 7.60 (1H, d), 7.7 (1H, s). LC-MS: m/z=376.3 (M+1).
The compound was prepared as in Example 260(b) from 3-iodocyclohex-2-enol (Synth. Commun. 2003, 33, 2487) (3.51 g, 15.67 mmol). Purification by flash chromatography afforded 3.64 g of the title compound. 1H NMR (400 MHz, CDCl3): 0.06 (3H, s), 0.07 (3H, s), 0.89 (9H, s), 1.60 (2H, m), 1.83 (2H, m), 2.47 (2H, m), 4.18 (1H, m), 6.30 (1H, m).
The compound of Example 266(a) (3.63 g, 10.73 mmol) was dissolved in dry THF (50 ml) and cooled to −78° C. tert-Butyllithium (13 ml, 22.1 mmol; 1.7 M in pentanes) was added and the mixture was stirred 30 min at −78° C. N,N-dimethylformamide (5.0 ml, 64.6 mmol) was added and the mixture was stirred for 1 h at −78° C. and then allowed to reach RT. The reaction was quenched with cold saturated NH4Cl and water and extracted with TBME. The organic phases were washed with water and brine, dried, filtered and evaporated. Purification by flash chromatography afforded 1.251 g of the title compound. 1H NMR (400 MHz, CDCl3): 0.12 (3H, s), 0.13 (3H, s), 0.92 (9H, s), 1.51-1.64 (2H, m), 1.81-1.97 (2H, m), 2.08-2.24 (2H, m), 4.46 (1H, m), 6.56 (1H, m), 9.47 (1H, s).
A mixture of the compound of Example 266(b) (1.442 g, 6.0 mmol), acetic acid (3 ml), THF (1 ml) and water (1 ml) was stirred at RT until reaction reached completion. Solvents were evaporated. Toluene was added and evaporation was repeated. The residue was purified by flash chromatography to afford 0.674 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.58 (1H, br S), 1.63 (2H, m), 1.85 (1H, m), 2.04 (1H, m), 2.20 (2H, m), 4.50 (1H, m), 6.69 (1H, m), 9.50) 1H, s).
The compound was prepared as in Example 183(b) from the compound of Example 266(c) (0.445 g, 3.53 mmol) and methylamine (3.53 ml, 7.05 mmol; 2 M in MeOH) in DCM (10 ml). Solvents were evaporated and the residue was dissolved in DCM (13 ml). TosMIC (0.882 g, 4.52 mmol) and DBU (1.055 ml, 7.05 mmol) were added. The procedure was completed as in Example 183(b). Yield 0.130 g. 1H NMR (400 MHz, CDCl3): 1.69 (2H, m), 1.93 (2H, m), 2.29 (2H, m), 2.63 (1H, br s), 3.67 (3H, d), 4.39 (1H, m), 5.91 (1H, m), 6.96 (1H, d), 7.37 (1H, m).
The compound was prepared as in Example 156(c) from the compound of Example 266(d) (0.26 g, 1.459 mmol). Purification by flash chromatography afforded 0.192 of the title compound. 1H NMR (400 MHz, CDCl3): 1.78 (2H, m), 1.87-2.02 (2H, m), 2.36 (2H, m), 3.69 (3H, d), 4.08 (1H, m), 5.83 (1H, m), 7.03 (1H, d), 7.41 (1H, br s).
The compound was prepared as in Example 156(d) from the compound of Example 266(e) (0.192 g, 0.945 mmol). Yield 0.161 g. 1H NMR (400 MHz, CDCl3): 1.40 (1H, m), 1.70 (1H, m), 1.88 (1H, m), 1.99 (1H, m), 2.27 (2H, m), 3.52 (1H, m), 3.66 (3H, d), 5.80 (1H, m), 6.95 (1H, d), 7.37 (1H, d). LC-MS: m/z=178.2 (M+1).
The compound was prepared as in Example 137(c) from the compound of Example 266(f) (0.161 g, 0.908 mmol) and 2-chloro-4-fluorobenzonitrile (0.141 g, 0.908 mmol). Yield 0.10 g. 1H NMR (400 MHz, CDCl3): 1.70 (1H, m), 1.77-1.92 (2H, m), 1.99 (1H, m), 2.37 (2H, m), 3.66 (3H, d), 4.21 (1H, m), 4.43 (1H, br d), 5.81 (1H, m), 6.49 (1H, dd), 6.66 (1H, d), 7.01 (1H, d), 7.40 (2H, m).
The compound was prepared as in Example 136(d) from the compound of Example 266(g) (0.10 g, 0.32 mmol). Purification by preparative LC afforded 78 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.22 (3H, t), 1.68-1.89 (2H, m), 2.02 (2H, m), 2.41 (2H, m), 3.40 (2H, m), 3.66 (3H, s), 4.54 (1H, m), 5.71 (1H, m), 6.64 (1H, dd), 6.78 (1H, d), 7.01 (1H, d), 7.40 (1H br s), 7.41 (1H, d).
The compound was prepared as in Example 183(b) from tert-butyl (3-formylcyclopent-3-en-1-yl)carbamate (0.423 g, 2.0 mmol) and 1-amino-2-propanol (0.232 ml, 3.0 mmol). Yield 0.293 g. 1H NMR (400 MHz, CDCl3): 1.28 (3H, d), 1.45 (9H, s), 2.40 (1H, m), 2.54 (1H, m), 2.94 (1H, m), 3.05 (1H, m), 3.92 (1H, m), 4.07 (2H, m), 4.35 (1H, m), 4.81 (1H, br d), 5.71 (1H, m), 6.92 (1H, d), 7.47 (1H, br s).
The compound was prepared as in Example 183(c) from the compound of Example 267(a) (0.289 g, 0.94 mmol). Purification by trituration with ether afforded 0.3 g of the title compound. 1H NMR (400 MHz, d6-DMSO): 1.17 (3H, d), 2.65 (1H, m), 2.72 (1H, m), 2.94 (1H, m), 3.07 (1H, m), 3.96 (2H, m), 4.08 (1H, dd), 4.33 (1H, m), 6.23 (1H, m), 7.78 (1H, m), 8.37 (3H, br s), 9.11 (1H, d), 14.9 (1H, br s).
The compound was prepared as in Example 137(c) from the compound of Example 267(b) (0.30 g, 0.94 mmol) using 4.5 molar equivalent of DIPEA. Yield 96 mg. 1H NMR (400 MHz, CDCl3): 1.27 (3H, dd), 2.52 (1H, m), 2.61 (1H, m), 3.06 (1H, m), 3.16 (1H, m), 3.91 (1H, m), 4.02-4.10 (2H, m), 4.25 (1H, m), 5.22 (1H, dd), 5.79 (1H, m), 6.70 (1H, dt), 6.87 (2H, m), 7.42 (1H, br s), 7.55 (1H, d).
tert-Butyldimethylsilyl trifluoromethanesulfonate (67 mg, 0.255 mmol) was added to a solution of the compound of Example 267(c) (96 mg, 0.255 mol) and DIPEA (89 μl, 0.51 mmol) in DCM (2.5 ml). The mixture was stirred overnight at RT. Another portion of tert-butyldimethylsilyl trifluoromethanesulfonate (0.101 g, 0.383 mmol) was added and stirring was continued. The reaction was quenched by addition of water and diluted with DCM. The phases were separated and the aqueous phase was extracted with DCM. The combined organic extracts were washed with water and brine, dried, filtered and evaporated. Purification by flash chromatography afforded 58 mg of the title compound. 1H NMR (400 MHz, CDCl3): −0.26 (3H, d), −0.09 (3H, d), 0.82 (9H, s), 1.21 (3H, d), 2.52 (1H, m), 2.64 (1H, m), 3.09 (1H, m), 3.21 (1H, m), 3.87-4.06 (3H, m), 4.27 (1H, m), 4.90 (1H, dd), 5.75 (1H, m), 6.71 (1H, dd), 6.88 (1H, d), 6.98 (1H, br s), 7.46 (1H, m), 7.57 (1H, d).
The compound was prepared as in Example 136(d) from the compound of Example 267(d) (58 mg, 0.118 mmol). Extraction with DCM. Purification by flash chromatography afforded 35 mg of the title compound. 1H NMR (400 MHz, CDCl3): −0.25 (3H, d), −0.08 (3H, d), 0.83 (9H, d), 1.23 (3H, dd), 1.24 (3H, t), 2.69 (1H, m), 2.84 (1H, m), 2.99 (1H, m), 3.09 (1H, m), 3.45 (2H, m), 3.94 (1H, m), 4.03 (1H, m), 4.06 (1H, mm), 4.66 (1H, m), 5.82 (1H, m), 6.81 (1H dd), 6.99 (1H, d), 7.00 (1H, br s), 7.48 (1H br s), 7.58 (1H, d).
tetra-Butylammonium fluoride (0.10 ml, 0.10 mmol; 1 M in THF) was added to a solution of the compound of Example 267(e) (35 mg, 0.067 mmol) in THF (1.0 ml). The mixture was stirred at RT until reaction reached completion. Solvent was evaporated and DCM and water were added. Phases were separated and the aqueous phase was extracted with DCM. The combined organic extracts were dried, filtered and evaporated. Purification by preparative HPLC afforded 11 mg of the title compound. 1H NMR (400 MHz, d4-MeOH): 1.21 (3H, dd), 1.22 (3H, t), 2.71 (1H, m), 2.84 (1H, m), 3.03 (1H, m), 3.15 (1H, m), 3.32 (1H, m, obscured by MeOH), 3.53 (2H, q), 4.04 (2H, m), 4.17 (1H, m), 6.03 (1H, m), 6.99 (1H, s), 7.03 (1H, d), 7.07 (1H, t), 7.66 (1H, d), 7.67 (1H, br s). LC-MS: m/z=405.8 (M+1).
A solution of diethylaminosulfur trifluoride (38 μl, 0.289 mmol) in DCM (0.5 ml) was added to a cooled solution (−78° C.) of the compound of Example 262 (94 mg, 0.241 mmol) in DCM (2 ml). The mixture was stirred and allowed to reach RT overnight. The mixture was cooled to −10° C. and more diethylaminosulfur trifluoride (50 μl, 0.38 mmol) was added and stirring was continued at RT. The reaction was quenched with saturated NaHCO3. DCM was added and phases were separated. The organic phase was washed with brine, dried, filtered and evaporated. Purification by preparative HPLC afforded 22 mg of the cis-isomer and 17.6 mg of the trans-isomer. 1H NMR (400 MHz, CDCl3) of the cis-isomer: 1.09 (3H, d), 1.18 (3H, s), 2.22 (1H, m), 2.51 (1H, s), 3.10 (3H, s), 4.33) 1H, dd), 5.49 (1H, m), 6.12 (1H, m), 7.03 (1H, dd), 7.13 (2H, m), 7.17 (1H, m), 7.64 (1H, d), 7.72 (1H, m). 1H NMR (400 MHz, CDCl3) of the trans-isomer: 1.11 (3H, s), 1.17 (3H, d), 2.04-2.27 (2H, m), 3.05 (3H, s), 4.66 (1H, dd), 5.31 (1H, m), 5.91 (1H, t), 6.95 (1H, dd), 7.11 (1H, d), 7.15 (1H, m), 7.22 (1H, m), 7.63 (1H, m), 7.81 (1H, m).
The compound was prepared as in Example 132(f) from the compound of Example 262 (0.168 g, 0.43 mmol). Yield 0.154 g. 1H NMR (400 MHz, CDCl3-d4-MeOH): 1.13 (3H, s), 1.22 (3H, s), 2.70 (2H, m), 3.09 (3H, s), 5.03 (1H, d), 6.66 (1H, d), 7.02 (1H, dd), 7.15 (2H, d), 7.16 (1H, d), 7.68 (1H, dd), 7.84 (1H, t).
The compound was prepared as in Example 156(b) from the compound of Example 269(a) (0.209 g, 0.42 mmol). Purification by flash chromatography afforded 90 mg of the title compound as a mixture of isomers. Stereoisomers of the title compound (175 mg) were separated using chiral preparative HPLC (Column: Daicel Chiralpak IA, 20 mm×250 mm, 5 m particle size, eluent A: MTBE+0.2% DEA, eluent B: EtOH+0.2% DEA, isocratic elution: 1% B, flow 20 ml/min, detection 300 nm). The separation afforded 28 mg of enantiomer 1 of the cis-isomer (rt 43.1 min), 25 mg of enantiomer 2 of the cis-isomer (rt 64.6 min), 1H NMR (400 MHz, CDCl3): 1.06 (3H, s), 1.15 (3H, s), 2.01 (2H, m), 3.06 (3H, s), 4.50 (1Hm m), 4.64 (1H, m), 5.69 (1H, d), 6.94 (1H, dd), 7.05 (1H, m), 7.09 (1H, d), 7.19 (1H, t), 7.61 (1H, dd), 7.72 (1H, t). LC-MS: m/z=391.33 (M+1), 25 mg of enantiomer 1 of the trans-isomer (rt 54.1 min) and 24.5 mg of enantiomer 2 of the trans-isomer (rt 73.9 min), 1H NMR (400 MHz, CDCl3): 1.05 (3H, s), 1.13 (3H, s), 1.87 (1H, m), 2.11 (1H, m), 2.96 (3H, s), 4.70 (1H, m), 4.75 (1H, m), 5.71 (1H, m), 6.98 (1H, dd), 7.06 (1H, m), 7.11 (1H, m), 7.20 (1H, m), 7.63 (1H, d), 7.83 (1H, m). LC-MS: m/z=391.29 (M+1).
A mixture of the compound of Example 194(g) (0.691 g, 1.864 mmol), imidazole (0.381 g, 5.59 mmol) and potassium carbonate (0.966 g, 6.69 mmol) in DMF (8 ml) was stirred at 60° C. until reaction was completed. Water and DCM were added. The phases were separated and the aqueous phase was extracted with DCM. The combined organic phases were washed with water and brine, dried, filtered and evaporated. Purification by flash chromatography afforded 0.515 g of the title compound. 1H NMR (400 MHz, CDCl3): 1.08 (3H, s), 1.27 (3H, t), 1.37 (3H, s), 2.98 (1H, dd), 3.14 (1H, dd), 3.37-3.56 (2H, m), 4.62 (1H, dd), 6.93 (1H, dd), 7.09 (1H, d), 7.10 (1H, t), 7.28 (1H, m), 7.61 (1H, t), 7.63 (1H, dd), 9.63 (1H, s).
Sodium borohydride (24 mg, 0.626 mmol) was added to a cooled (0-5° C.) solution of the compound of Example 270(a) (0.126 g, 0.313 mmol) in methanol (3 ml). The mixture was stirred until reaction was completed. Methanol was evaporated. Saturated NH4Cl, water and EtOAc were added. The phases were separated and the aqueous phase was extracted with EtOAc. The combined organic phases were washed brine, dried, filtered and evaporated to afford the title compound. Yield 0.121 g. 1H NMR (400 MHz, CDCl3): 0.91 (3H, s), 1.24 (3H, s), 1.30 (3H, t), 2.95 (1H, dd), 3.06 (1H, dd), 3.46-3.64 (2H, m), 4.06 (2H, m), 4.57 (1H, dd), 6.89 (1H, br s), 6.92 (1H, dd), 7.10 (2H, m), 7.34 (1H, br s), 7.60 (1H, d). LC-MS: m/z=405.71 (M+1). The enantiomers of the title compound (105 mg) were separated using chiral preparative HPLC (Column: Daicel Chiralpak IA, 20 mm×250 mm, 5 m particle size, eluent A: n-hexane+0.2% DEA, eluent B: EtOH+0.5% DEA, isocratic elution: 8% B, flow 20 ml/min, detection 300 nm) to afford 38 mg of enantiomer 1 (rt 26.3 min) and 41 mg of enantiomer 2 (rt 31 min).
Diethylaminosulfur trifluoride (6.0 ml, 45.8 mmol) was added to a cooled (0-5° C.) solution of 4-fluoro-2-formylbenzonitrile (3.1 g, 20.79 mmol) in DCM (60 ml). The mixture was stirred until the reaction was completed. The reaction was quenched by carefully adding saturated NaHCO3. The phases were separated and the aqueous phase was extracted with DCM. The combined organic phases were washed water and brine, dried, filtered and evaporated. The product (3.31 g) was used in the next step without purification. 1H NMR (400 MHz, CDCl3): 6.92 (1H, dt), 7.32 (1H, m), 7.48 (1H, dd), 7.79 (1H, m).
The compound was prepared as in Example 263(a) from the compound of Example 271(a) (0.539 g, 3.15 mmol) and 3-(1H-imidazol-1-yl)-6,6-dimethylcyclohex-2-enamine (0.574 g, 3.0 mmol) at 120° C. Purification by flash chromatography afforded 0.334 g of the title compound. 1H NMR (400 MHz, CDCl3): 7.70 (1H, t), 7.51 (1H, dt), 7.12 (1H, t), 7.09 (1H, dd), 6.91 (1H, d), 6.84 (1H, t), 6.73 (1H, dd), 5.64 (1H, m), 4.36 (1H, d), 4.03 (1H, m), 2.55 (2H, m), 1.78 (2H, m), 1.12 (3H, s), 1.03 (3H, s).
Sodium hydride (54 mg, 1.341 mmol; 60% dispersion in mineral oil) was weighed in a flask under N2. Dry DMF (3 ml) was added and the suspension was cooled to −10° C. Compound of Example 271(b) (0.306 g, 0.894 mmol) in dry DMF (2 ml) was added and the mixture was stirred at −10° C. for 30 min. Then, iodomethane (0.10 ml, 1.609 mmol) was added and stirring continued in less than 0° C. until reaction was completed. The mixture was diluted with a mixture of water and saturated NaHCO3 and extracted with DCM. The organic phase was washed with water and brine, dried, filtered and evaporated. Purification by flash chromatography afforded 0.208 g of the title compound. 1H NMR (400 MHz, CDCl3): 0.97 (3H, s), 1.11 (3H, s), 1.78 (2H, m), 2.51-2.59 (1H, m), 2.63-2.72 (1H, m), 2.97 (3H, s), 4.56 81H, m), 5.64 (1H, m), 6.87 (1H, t), 6.90 (dd), 7.08 (1H, d), 7.13 (1H, dd), 7.17 (1H, t), 7.55 (1H, dt), 7.76 (1H, t). The enantiomers of the title compound (208 mg) were separated using chiral preparative HPLC (Column: Daicel Chiralpak IC, 20 mm×250 mm, 5 μm particle size, eluent A: MTBE+0.2% DEA, eluent B: EtOH+0.2% DEA, isocratic elution: 5% B, flow 20 ml/min, detection 300 nm) to afford 74 mg of enantiomer 1 (rt 33 min) and 75 mg of enantiomer 2 (rt 38.5 min).
The compound was prepared as in Example 137(c) from (R)-1-(pyridin-3-yl)piperidin-3-amine dihydrochloride (0.15 g, 0.6 mmol) and 2-chloro-4-fluorobenzonitrile (0.103 g, 0.66 mmol) at 120° C. Yield 0.132 g. 1H NMR (400 MHz, CDCl3): 1.76 (2H, m), 1.89 (2H, m), 3.09-3.26 (3H, m), 3.41 (1H, dd), 3.74 (1H, m), 4.69 (1H, br d), 6.50 (1H, dd), 6.66 (1H, d), 7.20 (2H, m), 7.41 (1H, d), 8.16 (1H, dd), 8.33 (1H, dd).
The compound was prepared as in Example 136(d) from the compound of Example 272(a) (66 mg, 0.211 mmol) and iodomethane (26 μl, 0.422 mmol). Purification by flash chromatography afforded 24 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.7-1.9 (2H, m), 1.98 (2H, m), 2.73 (1H, dt), 2.84 (1H, dt), 2.94 (3H, s), 3.64 (1H, m), 3.69 (1H, m), 3.94 (1H, m), 6.67 (1H, dd), 6.79 (1H, d), 7.18 (2H, m), 7.45 (1H, d), 8.13 (1H, br s), 8.32 (1H, br s).
The compound was prepared as in Example 136(d) from (R)-2-chloro-4-((1-(pyridin-3-yl)piperidin-3-yl)amino)benzonitrile (66 mg, 0.211 mmol) and iodoethane (34 μl, 0.422 mmol). Purification by flash chromatography afforded 19 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.23 (3H, t), 1.75 (1H, dt), 1.87 (1H, m), 1.97-2.08 (2H, m), 2.74 (2H, m), 3.42 (2H, m), 3.64-3.73 (2H, m), 3.92 (1H, m), 6.65 (1H, dd), 6.77 (1H, d), 7.18 (2H, m), 7.44 (1H, d), 8.14 (1H, br s), 8.31 (1H, br s).
The compound was prepared as in Example 136(d) from 4-((4-hydroxy-3-(1H-imidazol-1-yl)-6,6-dimethylcyclohex-2-en-1-yl)(methyl)amino)-2-(trifluoroethyl)benzonitrile (cis-enantiomer 1) (28 mg, 0.072 mmol) and iodomethane (10 μl, 0.161 mmol). Purification by preparative HPLC afforded 4.3 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.09 (3H, s), 1.12 (3H, s), 1.91 (1H, dd), 2.03 (1H, dd), 3.02 (3H, s), 3.42 (3H, s), 4.08 (1H, m), 4.56 (1H, m), 5.73 (1H, d), 6.93 (1H, dd), 7.09 (1H, d), 7.11 (1H, m), 7.17 (1H, t), 7.62 (1H, d), 7.76 (1H, m).
A microvial was charged with palladium (0.160 g, 0.15 mmol, 10% on activated carbon) and washed with dry methanol. The compound of Example 270(a) (60 mg, 0.15 mmol) dissolved in benzonitrile (1 ml) was added and the mixture was stirred at 160° C. The mixture was filtered, washed with methanol and evaporated. Purification by preparative HPLC afforded 17.9 mg of the title compound. 1H NMR (400 MHz, CDCl3): 1.03 (3H, s), 1.27 (3H, t), 1.33 (3H, s), 2.72 (1H, ddd), 2.94 (1H, ddd), 3.52 (2H, m), 4.59 (1H, dd), 5.81 (1H, t), 6.91 (1H, dd), 7.01 (1H, m), 7.09 (1H, 1H, d), 7.13 (1H, br s), 7.56 (1H, br s), 7.60 (1H, dd).
The compound was prepared as in Example 137(c) from tert-butyl 6-amino-2-azabicyclo[2.2.1]heptane-2-carboxylate (0.425 g, 2.0 mmol) using 2.5 equivalent of DIPEA. Yield 0.436 g. LC-MS: m/z=382.2 (M+1).
The compound was prepared as in Example 137(d) from the compound of Example 276(a) (0.436 g, 1.143 mmol). Yield 0.469 g. LC-MS: m/z=396.6 (M+1).
The compound was prepared as in Example 187(b) from Example 276(b) (0.469 g, 1.204 mmol). Yield 0.361 g. 1H NMR (400 MHz, CDCl3): 1.38 (1H, m), 1.83 (1H, m), 1.92 (1H, m), 2.13 (1H, m), 2.62 (1H, m), 2.92 (1H, m), 3.09 (3H, s), 3.16 (1H, dt), 3.85 (1H, m), 4.00 (1H, br s), 7.10 (1H, dd), 7.18 (1H, d), 7.64 (1H, d).
The compound was prepared as in Example 137(a) from Example 276(c) (0.13 g, 0.44 mmol). Yield 77 mg. 1H NMR (400 MHz, CDCl3): 1.75-1.82 (2H, m), 1.84 (1H, m), 2.19 (1H, m), 2.64 (3H, s), 2.86 (1H, m), 3.10 (1H, d), 3.53 (1H, dt), 4.40 (1H, m), 4.42 (1H, m), 6.53 (1H, ddd), 6.82 (1H, dd), 6.95 (2H, m), 7.62 (1H, dd), 7.78 (1H, d), 7.84 (1H, dd).
The compound was prepared as in Example 137(c) from 1-benzyl-4,4-dimethylpiperidin-3-amine (1.528 g, 7.0 mmol) using 2.5 equivalents of DIPEA. Yield 1.667 g. LC-MS: m/z=354.58 (M+1).
The compound was prepared as in Example 137(d) from the compound of Example 277(a) (0.774 g, 2.187 mmol). Yield 0.478 g after flash chromatography. LC-MS: m/z=382.6 (M+1).
1-Chloroethyl chloroformate (35 μl, 0.327 mmol) was added the compound of Example 277(b) (0.10 g, 0.262 mmol) in 1,2-dichloroethane (2 ml). The mixture was stirred at RT for 30 min and then refluxed for 2 h. Solvent was evaporated. Methanol (2 ml) was added to the residue and the mixture was refluxed for 3 h. Solvent was evaporated and the residue was triturated with ether to afford 74 mg of the title compound. 1H NMR (400 MHz, DMSO-d6): 0.83 (3H, s), 1.10 (3H, t), 1.12 (3H, s), 1.54 (1H, m), 1.80 (1H, dt), 2.91 (1H, m), 3.17 (1H, m), 3.5 (2H, m), 4.31 (1H, dd), 6.94 (1H, dd), 7.06 (1H, d), 7.67 (1H, d), 8.84 (1H, br s), 9.09 (1H, br s). Some signals obscured by solvent. LC-MS: m/z=292.29 (M+1-HCl).
The compound was prepared s in Example 8(d) from the compound of Example 277(c) (74 mg, 0.225 mmol). Yield 57 mg. 1H NMR (400 MHz, CDCl3): 1.01 (3H, s), 1.14 (3H, s), 1.18 (3H, t), 1.64 (1H, dt), 1.82 (1H, m), 3.03 (1H, dt), 3.28 (1H, dd), 3.5 (4H, m), 4.01 (1H, dd), 6.73 (1H, dd), 6.85 (1H, d), 7.16-7.22 (2H, m), 7.42 (1H, d), 8.13 (1H, dd), 8.32 (1H, dd).
The title compound was prepared from the compound of Example 220(c) (0.5 g, 1.0 mmol), NaH (0.081 g, 2.0 mmol) and iodoethane (0.122 ml, 0.237 g, 1.5 mmol) and DMF (4 ml) as described in Example 74(g). Crude product was purified by column chromatography. Yield: 0.22 g. 1H NMR (400 MHz, CDCl3): 0.92 (3H, s), 1.00 (3H, s), 1.12 (3H, t), 1.53-1.70 (2H, m), 2.24-2.46 (2H, m), 3.36-3.47 (2H, m), 3.65-3.71 (2H, m), 4.14-4.20 (2H, m), 4.32-4.38 (1H, m), 4.46 (2H, s), 5.58-5.62 (1H, m), 6.88 (1H, dd), 6.97-7.03 (1H, m), 7.06 (1H, d), 7.15-7.22 (2H, m), 7.27 (3H, m), 7.54-7.60 (2H, m). [M+H]+=523.
The compound was prepared from the compound of Example 278(a) (0.17 g, 0.33 mmol), BCl3 (1 M solution in heptane, 0.81 ml, 0.81 mmol) and DCM (3 ml) as in Example 221. Crude product was purified by column chromatography. Yield 0.007 g. 1H NMR (400 MHz, CDCl3): 0.96 (3H, s), 1.06 (3H, s), 1.19 (3H, t), 1.59-1.74 (2H, m), 2.22 (1H, br. s.), 2.32-2.50 (2H, m), 3.40-3.56 (2H, m), 3.87-3.92 (2H, m), 4.10-4.16 (2H, m), 4.41-4.45 (1H, m), 5.66-5.72 (1H, m), 6.91 (1H, dd), 6.97 (1H, s), 7.09 (1H, d), 7.54 (1H, s), 7.58 (1H, d). [M+H]+=433.
The compound was prepared from the compound of Example 15(d) (1.0 g, 5.2 mmol), 2-chloro-4-fluorobenzonitrile (0.809 g, 5.2 mmol), DIPEA (2 ml, 1.48 g, 11.5 mmol) and DMSO (10 ml) as described in Example 74(f). Crude product was purified by column chromatography. Yield: 0.7 g. [M+H]+=328.
The compound was prepared from the compound of Example 279(a) (0.35 g, 1.07 mmol), NaH (0.085 g, 2.1 mmol), iodomethane (0.13 ml, 0.3 g, 2.1 mmol) and DMF (3 ml) as described in Example 74(g). Crude product was purified by column chromatography. Yield: 0.26 g. Enantiomers were separated by chiral HPLC (Column: Daicel Chiralpak IA 20 mm×250 mm 5 μm, eluent A: MTBE+0.2% DEA, solvent B: EtOH+0.2% DEA, isocratic B 8%, 20 ml/min) to obtain enantiomer 1 (yield 0.107 g, rt 13 min) and enantiomer 2 (yield 0.12 g, rt 19 min). 1H NMR (400 MHz, CDCl3): 0.98 (3H, s), 1.13 (3H, s), 1.71-1.88 (2H, m), 2.57-2.68 (1H, m), 2.74-2.84 (1H, m), 2.93 (3H, s), 4.46-4.56 (1H, m), 6.10-6.16 (1H, m), 6.73 (1H, dd), 6.83 (1H, d), 7.40-7.49 (1H, m), 7.97-8.05 (1H, m), 8.27-8.36 (1H, m). [M+H]+=342.
The compound was prepared from the compound of Example 2(a) (0.35 g, 1.07 mmol), NaH (0.125 g, 3.1 mmol), iodoethane (0.13 ml, 0.24 g, 1.6 mmol) and DMF (3 ml) as described in Example 74(g). Crude product was purified by column chromatography. Yield: 0.20 g. Enantiomers were separated by chiral HPLC (Column: Daicel Chiralpak IA 20 mm×250 mm 5 μm, eluent A: MTBE+0.2% DEA, solvent B: EtOH+0.2% DEA, isocratic B 10%, 20 ml/min) to obtain enantiomer 1 (yield 0.145 g, rt 7 min) and enantiomer 2 (yield 0.084 g, rt 14 min). 1H NMR (400 MHz, CDCl3): 0.99 (3H, s), 1.10 (3H, s), 1.19 (3H, t), 1.72-1.77 (1H, m), 1.78-1.88 (1H, m), 2.54-2.69 (1H, m), 2.71-2.82 (1H, m), 3.43 (2H, m), 4.41-4.51 (1H, m), 6.17-6.27 (1H, m), 6.71 (1H, dd), 6.83 (1H, d), 7.39-7.47 (1H, m), 7.95-8.05 (1H, m), 8.31 (1H, s). [M+H]+=356.
To a stirred solution of 3-isobutoxy-6-methylcyclohex-2-enone (13.10 g, 71.87 mmol) in dry THF (250 ml) was added lithium diisopropylamide (2 M solution in THF, 39.5 ml, 79 mmol) at −78° C. followed by stirring at this temperature for 1 h. Benzyl chloromethyl ether (15 ml, 107.8 mmol) was added at −78° C. dropwise. The mixture was allowed to warm to RT followed by stirring for 16 h. The mixture was poured into ice cold water and extracted with EtOAc. The organic layer was dried and concentrated to obtain the crude compound. Column chromatography provided 6.5 g of the title compound. [M+H]+=303.
To an ice cold stirred solution of the compound of Example 281(a) (6 g, 20 mmol) in acetone (60 ml) was added 1 N aqueous HCl (60 ml, 60 mmol). The solution was allowed to warm to RT and was stirred for 16 h. The mixture was concentrated and poured into water and extracted with EtOAc. The organic layer was dried, filtered and concentrated. Crude product was purified by column chromatography. Yield 3 g. [M−H]+=245.
To an ice cold stirred solution of the compound of Example 281(b) (3.0 g, 12.2 mmol) in CHCl3 (60 ml) was added oxalyl chloride (1.57 ml, 2.32 g, 18.3 mmol) followed by one drop of dry DMF. Ice bath was removed and the solution was allowed to warm to RT and stirred for 6 h. The mixture was poured into saturated NaHCO3 and extracted with DCM. The organic layer was dried and concentrated to obtain the crude compound. Crude product was used as such in the following step. Yield: 3.0 g (crude). [M+H]+=245.
To a stirred solution of the compound of Example 281(c) (3 g, 11.3 mmol) in toluene (60 ml) were added Et3N (2.36 ml, 1.71 g, 17 mmol), KHCO3 (1.13 g, 11.3 mmol) and imidazole (2.31 g, 34 mmol). The mixture was heated at reflux temperature for 16 h. The mixture was concentrated, poured into water and extracted with 5% MeOH in DCM. The organic layer was dried and concentrated to obtain the crude compound. Column chromatographic purification provided 1.8 g of the title compound. [M+H]+=297.
To an ice cold stirred solution of the compound of Example 281(d) (1.8 g, 6.1 mmol) in IPA (36 ml) was added 5 M NH3 in IPA (36 ml) followed by Ti(iOPr)4 (3.6 ml, 3.46 g, 12.1 mmol). Ice bath was removed and the solution was allowed to warm to RT followed by stirring for 4 h. The mixture was again cooled to 0° C. and sodium borohydride (0.69 g, 18.22 mmol) was added. The mixture was allowed to react at RT for 16 h. The mixture was poured into ice cold water and extracted with 5% MeOH in DCM. The organic layer was dried, filtered and to afford crude compound. This crude amine was dissolved in DCM (35 ml) and cooled on ice bath. Et3N (2.1 ml, 1.52 g, 15.1 mmol) was added followed by Boc2O (2.09 ml, 1.99 g, 9.1 mmol). The mixture was allowed to react at RT for 16 h. Then it was poured into water and extracted with DCM (2×75 ml). The organic layer was dried, filtered and concentrated to afford crude compound. Column chromatography provided 0.8 g of the title compound. [M+H]+=398.
To a cold stirred solution of the compound of Example 281(e) (0.8 g, 2.01 mmol) in 1,4-dioxane (30 ml) was added 5 M HCl in dioxane (30 ml, 150 mmol). The solution was allowed to warm to RT followed by stirring for 6 h. The mixture was concentrated to afford crude compound, which was triturated with ether. Yield: 0.55 g (crude, hydrochloride salt). [M+H]+=298.
The compound was prepared from the compound of Example 281(f) (0.5 g, 1.35 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.281 g, 1.49 mmol), DIPEA (0.94 ml, 0.7 g, 5.4 mmol) and DMSO (3 ml) as described in Example 74(f). Crude product was purified by column chromatography. Yield: 0.33 g. [M+H]+=467.
The compound was prepared from the compound of Example 281(g) (0.33 g, 0.7 mmol), NaH (0.057 g, 1.4 mmol), iodomethane (0.066 ml, 0.150 g, 1.06 mmol) and DMF (2 ml) as described in Example 74(g). Crude product was purified by column chromatography. Yield 0.3 g (diastereomeric ratio ˜2.6:1). [M+H]+=481.
Compound of Example 281(h) (0.15 g, 0.31 mmol)) was dissolved in DCM (4 ml) and the solution was cooled to 0° C. Boron trichloride (1 M solution, 0.94 ml, 0.94 mmol) was added and the solution was allowed to react at 0° C. When the reaction was complete it was quenched with EtOH and NaHCO3. Solid material was filtered off and the solution was concentrated. The crude material was purified by reverse phase chromatography. Yield: 0.039 g (trans-isomer, formate salt). 1H NMR (400 MHz, MeOH-d4): 0.93 (s, 3H), 1.78 (m, 1H), 1.92-2.05 (m, 1H), 2.53-2.65 (m, 1H), 2.67-2.80 (m, 1H), 3.02 (s, 3H), 3.32-3.38 (m, 1H), 3.41-3.48 (m, 1H), 4.97-5.03 (m, 1H), 5.90 (m, 1H), 7.10 (br. s., 1H), 7.22 (dd, 1H), 7.43-7.48 (m, 1H), 7.49-7.55 (m, 1H), 7.68 (d, 1H), 8.07-8.14 (m, 1H). [M+H]+=391. Cis-isomer was isolated from a 30 mg sample by basic preparative reverse phase HPLC to obtain cis-isomer as a free base. 1H NMR (400 MHz, MeOH-d4): 1.14 (3H, s), 1.75 (1H, m), 1.92-2.02 (1H, m), 2.56-2.69 (1H, m), 2.73-2.82 (1H, m), 2.98 (3H, s), 3.33-3.38 (1H, d), 3.40-3.46 (1H, d), 4.70-4.75 (1H, m), 5.81-5.86 (1H, m), 7.04-7.06 (1H, m), 7.19 (1H, dd), 7.26 (1H, d), 7.47 (1H, m), 7.68 (1H, d), 8.01 (1H, m). [M+H]+=391.
To 3-isobutoxycyclohex-2-enone (5.0 g, 29.72 mmol) in dry THF (100 ml) was added HMPA (5.3 ml, 5.46 g, 29.7 mmol) and lithium diisopropylamide (2 M in solution THF, 16.3 ml, 32.6 mmol) at −78° C. The mixture was stirred at this temperature for 1 h and benzyl chloromethyl ether (7.0 ml, 44.6 mmol) was added. The mixture was allowed to warm to RT followed by stirring for 16 h. The mixture was poured into ice cold water and extracted with EtOAc. The organic layer was dried, filtered and concentrated to obtain the crude compound. The crude compound was used for next step without further purification. Yield 3.0 g. [M+H]+=289.
The title compound was prepared from the compound of Example 282(a) (5 g, 17.4 mmol), 1 N HCl (30 ml, 30 mmol) and acetone (30 ml) as in Example 281(b). Crude product was purified by column chromatography. Yield 2.3 g. [M+H]+=233.
The compound was prepared from the compound of Example 282(b) (1.0 g, 4.3 mmol), oxalyl chloride (0.55 ml, 0.81 g, 6.4 mmol), DMF (0.05 ml) and DCM (15 ml) as in Example 281(c). Crude product was purified by column chromatography. Yield 0.25 g. [M+H]+=251. Further elution of the column provided 4-((benzyloxy)methyl)-3-chlorocyclohex-2-enone as a byproduct. Yield: 0.1 g. [M+H]+=251.
The compound was prepared from the compound of Example 282(c) (3.0 g, 12.0 mmol), Et3N (2.5 ml, 1.81 g, 18 mmol), KHCO3 (1.2 g, 12 mmol), imidazole (2.44 g, 35.9 mmol) and toluene (30 ml) as described in Example 281(d). Crude product was purified by column chromatography. Yield 1.5 g. [M+H]+=283.
The title compound was prepared from the compound of Example 282(d) (1.5 g, 5.3 mmol), 5 M NH3 in IPA (30 ml, 150 mmol), Ti(iOPr)4 (3.15 ml, 3.02 g, 10.6 mmol), sodium borohydride (0.6 g, 15.9 mmol) and IPA (30 ml) as described in Example 281(e). Crude amine was Boc protected as in Example 281(e) using Et3N (1.6 ml, 1.16 g, 11.4 mmol), Boc2O (1.5 ml, 1.42 g, 9.08 mmol) and DCM (25 ml). Crude material was purified by column chromatography. Yield 1.1 g. [M+H]+=384.
The compound was prepared from the compound of Example 282(e) (1.0 g, 2.6 mmol), 5 M HCl in 1,4-dioxane (30 ml, 150 mmol) and 1,4-dioxane (30 ml) as described in Example 281(f). Crude product was used as such in the following step. Yield 0.75 g (crude, hydrochloride salt). [M+H]+=284.
The compound was prepared from the compound of Example 282(f) (0.575 g, 1.61 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.458 g, 2.42 mmol), DIPEA (1.1 ml, 0.83 g, 6.4 mmol) and DMSO (10 ml) as described in Example 74(f). Crude product was purified by filtration through a pad of silica. Yield 0.397 g (70:30 mixture of diastereomers). [M+H]+=453.
The compound was prepared from the compound of Example 282(g) (0.4 g, 0.88 mmol), NaH (0.053 g, 1.32 mmol), iodomethane (0.11 ml, 0.25 g, 1.77 mmol) and DMF (10 ml) as described in Example 74(g). Crude product was purified by column chromatography. Yield 0.21 g. [M+H]+=467.
The compound was prepared from the compound of Example 282(h) (0.16 g, 0.34 mmol), BCl3 (1 M solution, 1.03 ml, 1.03 mmol) and DCM (4 ml) as described in Example 281(i). Crude product was first purified by column chromatography and all four enantiomers separated by chiral HPLC. (Column: Daicel Chiralpak IA 20 mm×250 mm 5 μm, eluent A: n-hexane+0.2% DEA, solvent B: EtOH+0.2% DEA, isocratic B 16%, 20 ml/min) to obtain enantiomer 1 (yield 0.011 g, rt 20 min) and enantiomer 2 (yield 0.013 g, rt 24 min) of diastereomer 1, 1H NMR (400 MHz, CDCl3):1.93-2.16 (3H, m), 2.36 (br. s, 1H), 2.55-2.65 (1H, m), 2.65-2.77 (1H, m), 2.90 (3H, s), 3.57 (1H, dd), 3.68 (1H, dd), 4.84-4.91 (1H, m), 5.65 (1H, m), 7.00 (1H, dd), 7.08 (1H, s), 7.14 (1H, m), 7.19 (1H, d), 7.58 (1H, d), 7.70 (1H, s). [M+H]+=377, and enantiomer 1 (yield 0.003 g, rt 28 min) and enantiomer 2 (yield 0.002 g, rt 35 min) of diastereomer 2, 1H NMR (400 MHz, CDCl3): 1.73 (br. s., 1H), 1.90-2.04 (2H, m), 2.26-2.38 (1H, m), 2.55-2.67 (1H, m), 2.73-2.84 (1H, m), 2.97 (3H, s), 3.54-3.66 (2H, m), 4.98 (1H, m), 5.73-5.80 (1H, m), 7.01 (1H, dd), 7.10-7.15 (1H, m), 7.15-7.20 (2H, m), 7.63 (1H, d), 7.77 (1H, s). [M+H]+=377.
Compound from the Example 242(b) (1.5 g, 8.4 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (1.77 g, 9.4 mmol), DIPEA (5.0 ml, 3.7 g, 29 mmol) and DMSO (10 ml) were mixed together in a 25 ml microwave reactor. The mixture was kept at 100° C. in a microwave reactor for 12 h. EtOAc and water were added. Title compound (trans-isomer) crystallized out from this mixture and it was filtered off. Yield 0.606 g. 1H NMR (400 MHz, DMSO-d6): 1.77-1.97 (2H, m), 2.60 (2H, m), 3.64-3.72 (1H, m), 4.07 (1H, m), 5.15-5.22 (1H, m), 5.84 (1H, m), 6.94-7.01 (2H, m), 7.12 (1H, d), 7.36 (1H, d), 7.56 (1H, m), 7.74 (1H, d), 8.01 (1H, m). [M+H]+=349. Filtrate was concentrated in vacuo and the crude product was purified by column chromatography. Yield 0.92 g (a mixture of cis and trans isomers). [M+H]+=349.
The title compound was prepared from the compound of Example 283(a) (0.1 g, 0.29 mmol), NaH (0.046 g, 1.15 mmol), iodomethane (0.054 ml, 0.12 g, 0.86 mmol) and DMF (1 ml) as described in Example 74(g). Crude product was purified by filtration through a pad of silica. Yield: 0.073 g. 1H NMR (400 MHz, CDCl3): 1.98 (1H, m), 2.22-2.31 (1H, m), 2.65-2.75 (2H, m), 2.97 (3H, s), 3.35 (3H, s), 3.53 (1H, m), 4.62-4.69 (1H, m), 5.56-5.62 (1H, m), 6.94-7.00 (1H, m), 7.09-7.17 (3H, m), 7.58-7.64 (1H, m), 7.70-7.77 (1H, m). [M+H]+=376.
The compound was prepared from the compound of Example 282(c) byproduct (1.2 g, 4.8 mmol), Et3N (1.0 ml, 0.73 g, 7.2 mmol), KHCO3 (0.48 g, 4.8 mmol), imidazole (0.97 g, 14.4 mmol) and toluene (20 ml) as in Example 281(d). Crude product was purified by column chromatography. Yield 0.6 g. [M+H]+=283.
The compound was prepared from the compound of Example 284 (a) (0.7 g, 2.5 mmol), 5M NH3 in IPA (15 ml, 75 mmol), Ti(iOPr)4 (1.45 ml, 5.0 mmol), sodium borohydride (0.28 g, 7.4 mmol) and IPA (15 ml) as described in Example 281(e). Crude amine was Boc protected as in Example 281(e) using Et3N (0.73 ml, 0.53 g, 5.3 mmol), Boc2O (0.7 ml, 0.67 g, 3.2 mmol) and DCM (15 ml). Crude material was purified by column chromatography. Yield 0.5 g. [M+H]+=384.
The title compound was prepared from the compound of Example 284(b) (0.7 g, 1.8 mmol), 5 M HCl in 1,4-dioxane (20 ml, 100 mmol) and 1,4-dioxane (20 ml) as described in Example 281(f). Crude product was used as such in the following step. Yield 0.4 g (crude, hydrochloride salt). [M+H]+=284.
The compound was prepared from the compound of Example 284(c) (0.37 g, 1.04 mmol), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.196 g, 1.04 mmol), DIPEA (0.72 ml, 0.54 g, 4.2 mmol) and DMSO (5 ml) as described in Example 74(f). Crude product was purified by filtration through a pad of silica. Yield 0.31 g (80:20 mixture of diastereomers). [M+H]+=453.
The compound was prepared from the compound of Example 284(d) (0.31 g, 0.69 mmol), NaH (0.041 g, 1.03 mmol), iodomethane (0.085 ml, 0.194 g, 1.37 mmol) and DMF (8 ml) as described in Example 74(g). Crude product was purified by column chromatography. Yield 0.213 g. [M+H]+=467.
The compound was prepared from the compound of Example 284(e) (0.16 g, 0.34 mmol), BCl3 (1 M solution, 1.03 ml, 1.03 mmol) and DCM (5 ml) as described in Example 281(i). Crude product was first purified by column chromatography and all four enantiomers separated by chiral HPLC. (Column: Daicel Chiralpak IC 20 mm×250 mm 5 μm, eluent A: MTBE+0.2% DEA, solvent B: EtOH+0.2% DEA, B isocratic 3% (0-54 min); 6% (55-70 min); 3% 71-80 min, 20 ml/min) to obtain enantiomer 1 (yield 0.017 g, rt 45 min) and enantiomer 2 (yield 0.015 g, rt 64 min) of diastereomer 1, 1H NMR (400 MHz, CDCl3): 1.87-2.03 (3H, m), 2.07 (1H, br. s.), 2.21-2.29 (1H, m), 2.74-2.83 (1H, m), 2.95 (3H, s), 3.55-3.64 (2H, m), 4.62-4.71 (1H, m), 5.77 (1H, m), 6.87 (1H, dd), 7.02 (1H, d), 7.04-7.07 (1H, m), 7.07-7.11 (1H, m), 7.58 (1H, d), 7.66 (1H, s). [M+H]+=377, and enantiomer 1 (yield 0.002 g, rt 52 min) and enantiomer 2 (yield 0.004 g, rt 60 min) of diastereomer 2, 1H NMR (400 MHz, CDCl3): 1.70 (1H, br. s.), 1.77-1.84 (1H, m), 2.02-2.12 (3H, m), 2.80-2.88 (1H, m), 2.91 (3H, s), 3.42-3.54 (2H, m), 4.70 (1H, m), 5.81-5.86 (1H, m), 6.86 (1H, dd), 7.02 (1H, d), 7.06 (1H, br. s.), 7.09 (1H, br. s.), 7.60 (1H, d), 7.65 (1H, br. s.). [M+H]+=377.
To a solution of the compound of Example 256(b) (20 g) in THF (200 ml) was added 2 M lithium diidopropylamide in THF (82 ml) at −78° C. dropwise and the mixture was stirred at the same temperature for 1 h. Then oxodiperoxymolybdenum(pyridine)(hexamethylphosphorictriamide) (MoOPH) (71.1 g) was added at −78° C. The mixture was allowed to warm to RT and stirred for 16 h. The mixture was poured into saturated aqueous sodium sulphite (200 ml) and extracted with EtOAc (2×200 ml). The organic layer was dried and concentrated to obtain the crude compound. The compound was purified by flash column using 230-400 mesh silica gel and eluted with EtOAc in petroleum ether to afford 10.5 g of the title compound. 1H NMR (400 MHz, DMSO-d6): 0.82 (d, 6H), 1.15 (s, 3H), 1.75-2.02 (m, 3H), 2.35-2.55 (m, 2H), 3.65 (d, 2H), 4.90 (s, 1H), 5.22 (s, 1H).
To a cold stirred solution of the compound of Example 285(a) (10.0 g) in acetone (100 ml) was added 1 N aqueous HCl (100 ml) and the mixture was allowed to warm to RT and stirred for 16 h. The mixture was concentrated, poured into water (60 ml) and extracted with EtOAc (2×150 ml). The organic layer was dried, filtered and concentrated to afford crude compound. The compound was purified by flash column using 230-400 mesh silica gel and eluted with 65% EtOAc in petroleum ether to afford 5 g of the title compound.
To a cold stirred solution of the compound of Example 285(b) (20.0 g) in CH2Cl2 (200 ml) was added oxalyl chloride (18.2 ml) followed by 1 ml of dry DMF. The mixture was stirred for 1 h at −5° C. and then poured into saturated aqueous NaHCO3 (100 ml). The mixture was extracted with CH2Cl2 (2×100 ml). The organic layer was dried and concentrated to obtain the crude title compound. The compound was directly used to next step without further purification. Yield 26 g (crude).
To a stirred solution of the compound of Example 285(c) (25.0 g, crude) in toluene (200 ml) were added Et3N (29.1 ml), KHCO3 (15.61 g) and imidazole (31.8 g). The mixture was heated at reflux temperature for 12 h. The mixture was concentrated, poured into water (100 ml) and extracted with 5% MeOH in CH2Cl2 (2×100 ml). The organic layer was dried and concentrated to obtain the crude compound. The compound was purified by flash column using 230-400 mesh silica gel and eluted with 4% MeOH in CH2Cl2 to afford 3.0 g of the title compound. LCMS: m/z=193.1 (M+1)+.
The compound was prepared from the compound of Example 285(d) (4.50 g) in IPA (10 ml), 5 M NH3 in IPA (50 ml), Ti(iOPr)4 (13.5 ml) and NaBH4 (2.60 g) as in Example 242(b). The mixture was poured into ice cold water (40 ml) and filtered. The filtrate was concentrated under reduced pressure to afford crude title compound. The compound was directly used to next step without further purification. Yield 5.0 g (crude). LCMS: m/z=194.2 (M+1)+.
The compound was prepared from the compound of Example 285(e) (5.0 g, crude), Et3N (8.5 ml) and (Boc)2O (8.5 ml) in CH2Cl2 (50 ml) as in Example 242(c). The compound was purified by flash column using 230-400 mesh silica gel and eluted with 4% MeOH in CH2Cl2 to afford 2.8 g of the title compound. LCMS: m/z=294.2 (M+1)+.
The compound was prepared from the compound of Example 285(f) (2.80 g) and 5 M HCl in 1,4-dioxane (30 ml) as described in Example 242(e). Yield: 1.8 g. LCMS: m/z=194.2 (M+1)+.
The compound was prepared from the compound of Example 285(g) (0.90 g), 4-fluoro-2-(trifluoromethyl)benzonitrile (0.741 g) and DIPEA (3.41 ml) in DMSO (25 ml). Reaction time was 3.5 h at 90° C. Yield: 1.58 g (crude). Part of the crude product (1.1 g) was purified and diastereomers separated by flash chromatography (column Silica RediSepRf gold 12 g, eluent 0-5% MeOH/DCM). Yields: 0.102 g (first eluted, diastereomer 1), 0.079 g (diastereomer 2). LCMS: m/z=363.3 (M+1)+.
The compound of Example 285(h) (diastereomer 1) (0.113 g) was dissolved to mixture of dry DMF (0.60 ml and THF (0.25 ml) N2. Sodium tert-butoxide (0.027 g) was added and at 0° C. iodomethane (0.019 ml). After stirring for 3 h at 0° C. an other batch of sodium tert-butoxide (0.010 g) and iodomethane (0.010 ml) were added and stirring continued for 0.5 h. MTBE (6 ml) was added and the mixture was allowed to warm to RT. Water was added and the mixture was stirred for 15 min. Organic layer was separated and water phase was extracted twice with MTBE. Combined organic phases were dried and evaporated. The crude product was purified by chromatography (silica column, eluent 0-10% MeOH/DCM) to obtain the title compound. LCMS: m/z=377.6 (M+1). 1H NMR (400 MHz, MeOH-d4): 1.28 (s, 3H), 1.96-2.04 (m, 1H), 2.07-2.17 (m, 1H), 2.54-2.64 (m, 1H), 2.87-2.98 (m, 1 H), 3.11 (s, 3H), 4.89 (br. s., 1H), 6.13 (t, 1H), 7.18 (dd, 1H), 7.25 (d, 1H), 7.59 (br, s, 1H), 7.69 (d, 1H), 7.91 (br, s, 1H), 9.09 (s, 1H).
The title compounds were prepared starting from the compound of Example 285(h) (diastereomer 2) (0.079 g) as described in Example 285(i) except one batch of sodium tert-butoxide (0.019 g) and iodomethane (0.014 ml) were used. Crude product was purified by chromatography (silica column, eluent 0-10% MeOH/DCM) to obtain hydroxy (1) and methoxy (2) title compounds. Yields: (1) 0.0083 g, (2) 0.0072 g. LCMS: m/z=(1) 377.7, (2) 391.7 (M+1)+. (1): H NMR (400 MHz, MeOH-d4): 1.22 (s, 3H), 1.89-2.00 (m, 1H), 2.00-2.11 (m, 1H), 2.71-2.76 (m, 2H), 3.00 (s, 3H), 4.80-4.87 (m, 1H), 5.83-5.86 (m, 1H), 7.05 (s, 1H), 7.24 (dd, 1H), 7.39 (d, 1H), 7.47 (s, 1H), 7.67-7.73 (m, 1H), 8.01 (s, 1H). (2): 1H NMR (400 MHz, MeOH-d4): 1.19 (s, 3H), 1.97-2.16 (m, 2H), 2.62-2.71 (m, 2H), 3.01 (s, 3H), 3.28 (s, 3H), 4.81-4.95 (m, 1H), 5.80-5.84 (m, 1H), 7.06 (br. s., 1H), 7.21 (dd, 1H), 7.35 (d, 1H), 7.48 (s, 1H), 7.70 (d, 1H), 8.03 (s, 1H).
DPPA—Diphenylphosphoryl azide
DBU—1,8-Diazabicyclo[5.4.0]undec-7-ene
EtOAc—Ethyl acetate
Pd2(dba)3—Tris(dibenzylideneacetone)dipalladium(0)
Pd(PPh3)4—Tetrakis(triphenylphosphine)palladium(0)
PPTS—Pyridinium p-toluenesulfonate
rac-BINAP—rac-2,2′-bis(diphenylphosphino)-1,1′-binaphthyl
RT—Room temperature
rt—Retention time
TBABr—Tetrabutylammonium bromide
TBAF—Tetrabutylammonium fluoride
TBME—Methyl tert-butyl ether
TBSCl—tert-Butyldimethylsilyl chloride
TFA—Trifluoroacetic acid
TsOH—p-Toluenesulfonic acid monohydrate
| Filing Document | Filing Date | Country | Kind |
|---|---|---|---|
| PCT/FI2014/000009 | 6/10/2014 | WO | 00 |
| Number | Date | Country | |
|---|---|---|---|
| 61833846 | Jun 2013 | US |
