Patent Application
20200017496
The present invention relates to heterocyclic compounds especially as prodrug compounds, their process of preparation, the pharmaceutical compositions comprising these compounds and use thereof, optionally in combination with other antibacterial agents and/or beta-lactams, for the prevention or treatment of bacterial infections. The present invention also relates to the use of these compounds as beta-lactamase inhibitors and/or antibacterial agent, preferably as beta-lactamase inhibitors.
It has been described that there is a continuous evolution of antibacterial resistance which could lead to bacterial strains against which known antibacterial compounds are inefficient. There is thus a need to provide novel compounds and composition that can overcome bacterial antibiotic resistance.
There is also a need to provide antibacterial agents and/or beta-lactamase inhibitors with oral bioavailability. The medical community urgently needs effective oral drugs for the treatment of uncomplicated UTIs.
The objective of the present invention is to provide new heterocyclic compounds, and especially new prodrugs, that can be used as antibacterial agent and/or beta-lactamase inhibitor.
An objective of the present invention is also to provide new heterocyclic compounds, and especially new prodrugs, that can be used for the prevention or treatment of bacterial infections.
Another objective of the present invention is to provide such new compounds which can overcome bacterial antibiotic resistance.
An objective of the invention is also to provide composition comprising these new heterocyclic compounds, optionally in combination with one or more other antibacterial agent, for the prevention or treatment of bacterial infections and which can overcome bacterial antibiotic resistance.
Other objectives will appear throughout the following description of the invention.
The present invention relates to compounds of formula (I)
wherein
Y1 represents CHF or CF2;
Y2 represents H, linear or branched (C1-C16)-alkyl, (C3-C11)-cycloalkyl, (C5-C11)-cycloalkenyl, (C4-C10)-heterocycloalkyl comprising from 1 to 2 heteroatoms chosen among N, O or S, (C5-C10)-heteroaryl comprising from 1 to 4 heteroatom chosen among N, O or S, (C6-C10)-aryl, (C7-C16)-aralkyl, (C7-C16)-heteroaralkyl comprising from 1 to 4 heteroatom chosen among N, O or S, a (C1-C6)alkyl-heterocycle wherein the heterocycle comprises from 4 to 5 carbon atoms and 1 to 2 heteroatoms chosen among N, O or S, preferable N and O; a polyethylene glycol (PEG) group, a cetal group or an acetal group, wherein the alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heterocycle, heteroaryl, aryl, aralkyl and heteroaralkyl is optionally substituted;
R1 represents CN, CH2OY5 or C(═O)NH2;
Y5 represents H, linear or branched (C1-C6)-alkyl, (C3-C11)-cycloalkyl, (C6-C10)-aryl, (C4-C10)-heterocycloalkyl comprising from 1 to 2 heteroatoms chosen among N, O or S, (C5-C10)-heteroaryl comprising from 1 to 4 heteroatom chosen among N, O or S, the alkyl, cycloalkyl, aryl, heterocycloalkyl and heteroaryl is optionally substituted by one or more (C1-C10)-alkyl, OH, O(C1-C6)-alkyl, NH2, NH(C1-C6)-alkyl, N[(C1-C6)-alkyl]2, C(═O)NH2, C(═O)NH(C1-C6)-alkyl or C(═O)N[(C1-C6)-alkyl]2;
with the conditions that when Y2 is H then R1 is CN or CH2OY5 and when R1 is C(═O)NH2 then Y2 is not H or unsubstituted (C1-C6)-alkyl,
The presence of at least one fluorine atom on the molecule, and specifically at the position 2 of the ester function, renders this molecule highly hydrolysable and it is thus very difficult to provide a prodrug sufficiently stable for the targeted effect.
The alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heterocycle, heteroaryl, aryl, aralkyl and heteroaralkyl representing Y2 are optionally substituted by one or more groups chosen among: halogen, ═O, Y3, OY3, OC(═O)Y3, SY3, NY3Y4, NY3C(═O)Y4, NY3S(═O)2Y4, C(═O)Y3, C(═O)OY3, C(═O)NY3Y4, S(═O)Y3, S(═O)2Y3 or S(═O)2NY3Y4, wherein Y3 and Y4, identical or different, represent H, linear or branched (C1-C10)-alkyl, (C3-C11)-cycloalkyl, (C6-C10)-aryl, (C4-C10)-heterocycloalkyl comprising from 1 to 2 heteroatoms chosen among N, O or S, (C5-C10)-heteroaryl comprising from 1 to 4 heteroatom chosen among N, O or S, or form together with the nitrogen to which they are linked a (C4-C10)-heterocycloalkyl comprising from 1 to 2 heteroatoms chosen among N, O or S; the alkyl, cycloalkyl, aryl, heterocycloalkyl and heteroaryl is optionally substituted by one or more linear or branched (C1-C10)-alkyl, OH, O(C1-C6)-alkyl, NH2, NH(C1-C6)-alkyl, N[(C1-C6)-alkyl]2, C(═O)NH2, C(═O)NH(C1-C6)-alkyl or C(═O)N[(C1-C6)-alkyl]2.
Preferably, in the compounds of formula (I) Y2 represents H and R1 represents CN or CH2OY5, Y5 being as defined above, preferably R1 represents CN, CH2OH or CH2OMe. Preferably, in the compounds of formula (I) according to the invention Y2 is different from H and R1 represents CONH2 or CN.
Preferably, in the compounds of formula (I) Y2 represents a substituted linear or branched (C1-C16)-alkyl, (C3-C11)-cycloalkyl, (C5-C11)-cycloalkenyl, (C4-C10)-heterocycloalkyl comprising from 1 to 2 heteroatoms chosen among N, O or S, (C5-C10)-heteroaryl comprising from 1 to 4 heteroatom chosen among N, O or S, (C6-C10)-aryl, (C7-C16)-aralkyl, (C7-C16)-heteroaralkyl comprising from 1 to 4 heteroatom chosen among N, O or S, a (C1-C6)-alkyl-heterocycle wherein the heterocycle comprises from 4 to 5 carbon atoms and 1 to 2 heteroatoms chosen among N, O or S, preferable N and O, a PEG group, a cetal group or an acetal group, wherein the alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heterocycle, heteroaryl, aryl, aralkyl and heteroaralkyl is optionally substituted, preferably substituted by one or more linear or branched (C1-C10)-alkyl and R1 is C(O)NH2.
Preferably, in the compounds of formula (I) according to the invention Y2 is linear or branched (C1-C16)-alkyl, (C3-C11)-cycloalkyl, (C5-C11)-cycloalkenyl, (C4-C10)-heterocycloalkyl comprising from 1 to 2 heteroatoms chosen among N, O or S, (C5-C10)-heteroaryl comprising from 1 to 4 heteroatom chosen among N, O or S, (C6-C10)-aryl, (C7-C16)-aralkyl, (C7-C16)-heteroaralkyl comprising from 1 to 4 heteroatom chosen among N, O or S, a (C1-C6)-alkyl-heterocycle wherein the heterocycle comprises from 4 to 5 carbon atoms and 1 to 2 heteroatoms chosen among N, O or S, preferable N and O, a PEG group, a cetal group or an acetal group, wherein the alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heterocycle, heteroaryl, aryl, aralkyl and heteroaralkyl is optionally substituted, preferably substituted by one or more linear or branched (C1-C10)-alkyl and R1 is CN or CH2OY5, Y5 being as defined above, preferably R1 represents CN, CH2OH or CH2OMe.
Preferably, in the compounds of formula (I) according to the invention Y2 represents a linear or branched (C2-C16)-alkyl, (C3-C11)-cycloalkyl, (C5-C11)-cycloalkenyl, (C4-C10)-heterocycloalkyl comprising from 1 to 2 heteroatoms chosen among N, O or S, a PEG group, a (C7-C16)-aralkyl group, (C7-C16)-heteroaralkyl comprising from 1 to 4 heteroatom chosen among N, O or S, a (C1-C6)-alkyl-heterocycle wherein the heterocycle comprises from 4 to 5 carbon atoms and 1 to 2 heteroatoms chosen among N, O or S, preferable N and O; wherein the alkyl, cycloalkyl, cycloalkenyl, aralkyl, heteroaralkyl, heterocycle and heterocycloalkyl is optionally substituted preferably as mentioned above, preferably substituted by one or more linear or branched (C1-C10)-alkyl.
Preferably, in the compounds of formula (I) according to the invention R1 represents CONH2 and Y2 represents a linear or branched (C2-C16)-alkyl, (C3-C11)-cycloalkyl, (C5-C11)-cycloalkenyl, (C4-C10)-heterocycloalkyl comprising from 1 to 2 heteroatoms chosen among N, O or S, a PEG group, a (C7-C16)-aralkyl group, a (C1-C6)-alkyl-heterocycle wherein the heterocycle comprises from 4 to 5 carbon atoms and 1 to 2 heteroatoms chosen among N, O or S, preferable N and O; wherein the alkyl, cycloalkyl, cycloalkenyl, aralkyl, heterocycle and heterocycloalkyl is optionally substituted preferably as mentioned above, preferably substituted by one or more linear or branched (C1-C10)alkyl.
Preferably, in the compounds of formula (I) according to the invention R1 represents CONH2, Y1 represents CF2 and Y2 represents a linear or branched (C2-C8)-alkyl, (C3-C7)-cycloalkyl or (C4-C10)-heterocycloalkyl comprising from 1 to 2 O; wherein the alkyl, cycloalkyl and heterocycloalkyl is optionally substituted by one or more Y3 and OY3; wherein Y3 is H, linear or branched (C1-C8)-alkyl, (C3-C7)-cycloalkyl or (C4-C10)-heterocycloalkyl comprising from 1 to 2 O; wherein the alkyl, cycloalkyl, heterocycloalkyl representing Y3 is optionally substituted by one or more linear or branched (C1-C6)-alkyl, OH or O(C1-C6)-alkyl.
Preferably, in the compounds of formula (I) according to the invention Y2 is chosen from:
Preferably, the compounds of formula (I) according to the invention are chosen from:
Preferably, in the compounds of formula (I) according to the invention R1 represents CN and Y2 represents H or a (C7-C10)-aralkyl group, preferably benzyl.
Preferably, in the compounds of formula (I) according to the invention Y2 represents a linear or branched (C3-C16)-alkyl, a (C6-C10)-cycloalkyl, (for example adamantyl or cyclohexyl), a benzyl.
Preferably, in the compounds of formula (I) according to the invention R1 represents CONH2 and Y2 represents a linear or branched (C3-C16)-alkyl, a (C6-C10)-cycloalkyl, (for example adamantyl or cyclohexyl), a benzyl.
The present invention also relates in one embodiment compounds of formula (I):
wherein
Y1 represents CHF or CF2;
Y2 represents CY3Y4Y6;
R1 represents CN, CH2OY5 or C(═O)NH2;
Y5 represents H, linear or branched (C1-C6)-alkyl, (C3-C11)-cycloalkyl, (C6-C10)-aryl, (C4-C10)-heterocycloalkyl comprising from 1 to 2 heteroatoms chosen among N, O or S, (C5-C10)-heteroaryl comprising from 1 to 4 heteroatom chosen among N, O or S, the alkyl, cycloalkyl, aryl, heterocycloalkyl and heteroaryl is optionally substituted by one or more (C1-C10)-alkyl, OH, O(C1-C6)-alkyl, NH2, NH(C1-C6)-alkyl, N[(C1-C6)-alkyl]2, C(═O)NH2, C(═O)NH(C1-C6)-alkyl or C(═O)N[(C1-C6)-alkyl]2;
Y3, Y4 and Y6, identical or different, represent (C1-C3)-alkyl, (C3-C6)-cycloalkyl, (C4-C8)-heterocycloalkyl comprising from 1 to 2 heteroatoms chosen among N—Y7, O or S, a group CH2—O—(C1-C3)-alkyl, or a group CH2—O—(CH2)2—O—(C1-C3)-alkyl, wherein the alkyl, cycloalkyl and heterocycloalkyl is optionally substituted by one or more Y8; or Y3 and Y4 could form together with the carbon atom to which they are linked a (C3-C6)-cycloalkyl or a (C4-C8)-heterocycloalkyl comprising from 1 to 2 heteroatoms chosen among N—Y7, O or S, wherein the cycloalkyl and heterocycloalkyl is optionally substituted by one or more Y8;
Y7 represents (C1-C6)-alkyl, (C3-C6)-cycloalkyl, C(═O)(C1-C6)-alkyl or C(═O)(C3-C6)-cycloalkyl;
Y8 represents (C1-C6)-alkyl, (C3-C6)-cycloalkyl, O(C1-C6)-alkyl or O(C3-C6)-cycloalkyl.
Preferably, in this embodiment:
Preferably, the compounds of formula (I) according to the invention are compounds of formula (I*)
wherein R1, Y1 and Y2 are as defined above.
The term “alkyl”, as used herein, refers to an aliphatic-hydrocarbon group which may be linear or branched, having 1 to 16 carbon atoms in the chain, in particular 1 to 8 or 1 to 6, unless specified otherwise. Specific examples of alkyl groups, linear or branched, include, but are not limited to, methyl, ethyl, propyl, butyl, pentyl, hexyl, heptyl, octyl, nonyl, decyl, undecyl, dodecyl, tridecyl, tetradecyl, pentadecyl, hexadecyl. Preferably, the alkyl group, straight or branched, is methyl, ethyl, propyl, butyl, pentyl, heptyl, hexadecyl.
The term “cycloalkyl” refers to a saturated monocyclic, polycyclic or spirocyclic non-aromatic hydrocarbon ring of 3 to 11 carbon atoms, in particular of 3 to 7 carbon atoms. Specific examples of monocyclic, polycyclic or spirocyclic cycloalkyl groups include, but are not limited to, cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, cyclooctyl, cyclononyl, cyclodecyl, cycloundecyl, decalyl, norbornyl, isopinocamphyl, norpinanyl, adamantyl, spirohexane, spiroheptane, spirooctane, spirononane, spirodecane, spiroundecane. Preferably, the cycloalkyl group is cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl.
The term “cycloalkenyl” refers to a saturated monocyclic or bicyclic non-aromatic hydrocarbon ring of 5 to 11 carbon atoms and comprising at least one unsaturation. Specific examples of cycloalkenyl groups include, but are not limited to, cyclopentenyl, cyclohexenyl, cycloheptenyl, cyclooctenyl. Preferably, the cycloalkenyl group is cyclohexenyl.
The term “heterocycle” or “heterocycloalkyl”, as used herein and without contrary definition specifically mentioned, either alone or in combination with another radical, refers to a monocyclic, bicyclic or spirocyclic saturated or partially unsaturated hydrocarbon radical, preferably 4 to 10-membered, comprising one or two heteroatom, such as N, O, S, in particular one or two 0, and linked to the structure of the compounds by a carbon atom of the heterocycloalkyl. Suitable heterocycloalkyl are also disclosed in the Handbook of Chemistry and Physics, 76th Edition, CRC Press, Inc., 1995-1996, pages 2-25 to 2-26. Specific examples of heterocycloalkyl groups include, but are not limited to, azetidinyl, oxetanyl, oxazolidinyl, pyrrolidinyl, tetrahydropyridinyl, piperidinyl, morpholinyl, thiomorpholinyl, dioxanyl, pyrrolidinyl, imidazolidinyl, pyranyl, tetrahydrofuranyl, dioxolanyl, tetrahydropyranyl, tetrahydroquinolinyl, dihydrobenzoxazinyl, oxepanyl, azaspirooctanyl, azaspirodecanyl, oxaspirooctanyl, oxaspirodecanyl, thiaspirooctanyl, thiaspirodecanyl. Preferably, the heterocycloalkyl group is piperidinyl, pyranyl, oxepanyl, morpholinyl, thiomorpholinyl.
The term “heteroaryl”, as used herein and without contrary definition specifically mentioned, either alone or in combination with another radical, refers to a monocyclic or bicyclic aromatic hydrocarbon radical, preferably 5 to 10-membered, comprising one, two, three or four heteroatom, such as N, O, S. Suitable heteroaryl are also disclosed in the Handbook of Chemistry and Physics, 76th Edition, CRC Press, Inc., 1995-1996, pages 2-25 to 2-26. Specific examples of heteroaryl groups include, but are not limited to, oxazolyl, oxadiazolyl, pyrrolyl, pyridyl, pyrazolyl, pyrimidinyl, pyrazinyl, tetrazolyl, triazolyl, thienyl, thiazolyl, furanyl, thiadiazolyl, isothiazolyl, isoxazolyl. Preferably, the heteroaryl group is pyridinyl, furanyl, thiazolyl, thienyl, imidazolyl.
The term “aryl”, as used herein and without contrary definition specifically mentioned, either alone or in combination with another radical, refers to a monocyclic or bicyclic aromatic hydrocarbon radical. Specific examples of aryl groups include phenyl, naphtyl.
The term “aralkyl”, as used herein and without contrary definition specifically mentioned, refers to an alkyl substituted by an aryl, the alkyl and aryl being as defined above. By (C7-C16)-aralkyl it should be understand that the aralkyl group comprises in total from 7 to 16 carbon atoms. Specific examples of aralkyl groups include, but are not limited to benzyl, phenylethyl, phenylpropyl, phenylbutyl, phenylpentyl, phenylhexyl, phenylheptyl, phenyloctyl, phenylnonyln phenyldecyl, naphtylethyl, naphtylpropyl, naphtylbutyl, naphtylpentyl, naphtylhexyl.
The term “heteroaralkyl”, as used herein and without contrary definition specifically mentioned, refers to an alkyl substituted by an heteroaryl, the alkyl and heteroaryl being as defined above. By (C7-C16)-heteroaralkyl it should be understand that the heteroaralkyl group comprises in total from 7 to 16 carbon atoms.
The term “cetal”, as used herein and without contrary definition specifically mentioned, refers to a group consisting of Y2 of formula
and the oxygen atom to which Y2 is linked, wherein R2 represents a linear or branched (C1-C6)alkyl or C(═O)(C1-C6)alkyl. The term “acetal”, as used herein and without contrary definition specifically mentioned, refers to a group consisting of Y2 of formula
and the oxygen atom to which Y2 is linked, wherein R2 represents a linear or branched (C1-C6)alkyl or C(═O)(C1-C6)alkyl.
The term “PEG” or “polyethylene glycol”, as used herein and without contrary definition specifically mentioned, refers to a group Y2 of formula
wherein m is an integer from 1 to 10.
Moreover some compounds according to this invention may contain a basic amino group and thus may form an inner zwitterionic salt (or zwitterion) with the acidic group —OCHFCO2H or —OCF2CO2H where Y2 is H and such inner zwitterionic salts are also included in this invention.
The term “optionally substituted” means “non-substituted or substituted”.
The term “racemate” is employed herein to refer to an equal amount of two specific enantiomers.
The term “enantiomer” is employed herein to refer to one of the two specific stereoisomers which is a non-superimposable mirror image with one other but is related to one other by reflection.
The compounds of the invention can possess one or more asymmetric carbon atoms and are thus capable of existing in the form of optical isomers as well as in the form of racemic or non-racemic mixtures thereof. The compounds of the invention can be used in the present invention as a single isomer or as a mixture of stereochemical isomeric forms. Diastereoisomers, i.e., nonsuperimposable stereochemical isomers can be separated by conventional means such as chromatography, distillation, crystallization or sublimation. The optical isomers (enantiomers) can be obtained by using optically active starting materials, by resolution of the racemic mixtures according to conventional processes, for example by formation of diastereoisomeric salts by treatment with an optically active acid or base or by using chiral chromatography column.
The expression “pharmaceutically acceptable” is employed herein to refer to those compounds, materials, compositions, and/or dosage forms which are, within the scope of sound medical judgment, suitable for use in contact with the tissues of human beings and animals without excessive toxicity, irritation, allergic response, or other problem or complication, commensurate with a reasonable benefit/risk ratio.
As used herein, the expression “pharmaceutically acceptable salts” refers to derivatives of the disclosed compounds wherein the parent compound is modified by making acid or base salts thereof. Examples of pharmaceutically acceptable salts include, but are not limited to, mineral or organic acid salts of basic residues such as amines; alkali or organic salts of acidic residues such as carboxylic acids; and the like. The pharmaceutically acceptable salts of the present invention can be synthesized from the parent compound which comprises a basic or an acidic moiety, by conventional chemical methods. Furthermore, the expression “pharmaceutically acceptable salt” refers to relatively non-toxic, inorganic and organic acid or base addition salts of the compounds of the present invention. These salts can be prepared in situ during the final isolation and purification of the compounds. In particular, the acid addition salts can be prepared by separately reacting the purified compound in its purified form with an organic or inorganic acid and by isolating the salt thus formed. Among the examples of acid addition salts are the hydrobromide, hydrochloride, hydroiodide, sulfamate, sulfate, bisulfate, phosphate, nitrate, acetate, propionate, succinate, oxalate, valerate, oleate, palmitate, stearate, laurate, borate, benzoate, lactate, tosylate, citrate, maleate, fumarate, tartrate, naphthylate, mesylate, glucoheptanate, glucoronate, glutamate, lactobionate, malonate, salicylate, methylenebis-b-hydroxynaphthoate, gentisic acid, isethionate, di-p-toluoyltartrate, ethanesulfonate, benzenesulfonate, cyclohexyl sulfamate, quinateslaurylsulfonate salts, and the like. Examples of base addition salts include ammonium salts such as tromethamine, meglumine, epolamine, etc, metal salts such as sodium, lithium, potassium, calcium, zinc or magnesium salts with organic bases such as dicyclohexylamine salts, N-methyl-D-glucamine. Lists of suitable salts may be found in Remington's Pharmaceutical Sciences, 17th ed., Mack Publishing Company, Easton, Pa., 1985, p. 1418, P. H. Stahl, C. G. Wermuth, Handbook of Pharmaceutical salts—Properties, Selection and Use, Wiley-VCH, 2002 and S. M. Berge et al. “Pharmaceutical Salts” J. Pharm. Sci, 66: p. 1-19 (1977).
Compounds according to the invention also include isotopically-labeled compounds wherein one or more atoms is replaced by an atom having the same atomic number, but an atomic mass or mass number different from the atomic mass or mass number usually found in nature. Examples of isotopes suitable for inclusion in the compounds described above and are not limited to 2H, 3H, 11C, 13C, 14C, 19F, 18F, 15N, 13N, 33S, 34S, 35S, 36S, 17O or 18O. In one embodiment, isotopically-labeled compounds are useful in drug and/or substrate tissue distribution studies. In another embodiment, substitution with heavier isotopes such as deuterium (2H) affords greater metabolic stability (for example increased in vivo half-life or reduced dosage requirements). Isotopically-labeled compounds are prepared by any suitable method or by processes using an appropriate isotopically-labeled reagent in place of the non-labeled reagent otherwise employed.
The compounds of formula (I) or (I*) according to the invention with Y2 different from H, can be used as a pro-drug of a compound of formula (I′) or (I′*)
wherein R1 and Y1 are as defined above and Y2 represents H or a base addition salts for example chosen among ammonium salts such as tromethamine, meglumine, epolamine; metal salts such as sodium, lithium, potassium, calcium, zinc, aluminium or magnesium; salts with organic bases such as methylamine, propylamine, trimethylamine, diethylamine, triethylamine, N,N-dimethylethanolamine, tris(hydroymethyl)aminomethane, ethanolamine, pyridine, picoline, dicyclohexylamine, morpholine, benzylamine, procaine, N-methyl-D-glucamine; salts with amino acids such as arginine, lysine, ornithine and so forth; phosphonium salts such as alkylphosphonium, arylphosphonium, alkylarylphosphonium and alkenylarylphosphonium; and salts with quaternary ammonium such as tetra-n-butylammonium. List of suitable salts may be found in Remington's Pharmaceutical Sciences, 17th ed. Mack Publishing Company, Easton, Pa., 1985, p 1418, P. H. Stahl, C. G. Wermuth, Handbook of Pharmaceutical salts—Properties, Selection and Use, Wiley-VCH, 2002 and S. M. Berge et al. “Pharmaceutical Salts” J. Pharm. Sci, 66: p. 1-19 (1977).
The present invention also relates to a pharmaceutical composition comprising at least a compound of formula (I) or (I*) according to the invention.
This pharmaceutical composition can further comprise at least one pharmaceutically acceptable excipient.
The term “pharmaceutically acceptable carrier” or “pharmaceutically acceptable excipient” is employed for any excipient, solvent, dispersion medium, absorption retardant, diluent or adjuvant etc., such as preserving or antioxidant agents, fillers, binders, disintegrating agents, wetting agents, emulsifying agents, suspending agents, solvents, dispersion media, coatings, antibacterial agents, isotonic and absorption delaying agents and the like, that does not produce a secondary reaction, for example an allergic reaction, in humans or animals. Typical, non-limiting examples of excipients include mannitol, lactose, magnesium stearate, sodium saccharide, talcum, cellulose, sodium croscarmellose, glucose, gelatin, starch, lactose, dicalcium phosphate, sucrose, kaolin, magnesium carbonate, wetting agents, emulsifying agents, solubilizing agents, sterile water, saline, pH buffers, non-ionic surfactants, lubricants, stabilizing agents, binding agents and edible oils such as peanut oil, sesame oils and the like. In addition, various excipients commonly used in the art may be included. Pharmaceutically acceptable carriers or excipients are well known to a person skilled in the art, and include those described in Remington's Pharmaceutical Sciences (Mack Publishing Company, Easton, USA, 1985), Merck Index (Merck & Company, Rahway, N.J.), Gilman et al (Eds. The pharmacological basis of therapeutics, 8th Ed., pergamon press., 1990). Except insofar as any conventional media or adjuvant is incompatible with the active ingredient according to the invention, its use in the therapeutic compositions is contemplated.
The pharmaceutical composition according to the invention can further comprise at least one compound selected from an antibacterial compound, preferably a β-lactam compound. Thus, the pharmaceutical composition according to the invention can comprise:
The term “beta-lactam” or “β-lactam” refers to antibacterial compounds comprising a β-lactam unit, i.e. a group.
The expression “antibacterial agent” as used herein, refers to any substance, compound or their combination capable of inhibiting, reducing or preventing growth of bacteria, inhibiting or reducing ability of bacteria to produce infection in a subject, or inhibiting or reducing ability of bacteria to multiply or remain infective in the environment, or decreasing infectivity or virulence of bacteria.
The antibacterial agent is selected among the following families: aminoglycosides, beta-lactams, glycylcyclines, tetracyclines, quinolones, fluoroquinolones, glycopeptides, lipopeptides, macrolides, ketolides, lincosamides, streptogramins, oxazolidinones and polymyxins alone or in mixture.
Preferably, the further antibacterial agent is selected among the beta-lactam families, and more preferably among penicillin, cephalosporins, penems, carbapenems and monobactam, alone or in mixture.
Among the penicillin the antibacterial agent is preferably selected in the group consisting of amoxicillin, ampicillin, azlocillin, mezocillin, apalcillin, hetacillin, bacampicillin, carbenicillin, sulbenicillin, temocillin, ticarcillin, piperacillin, mecillinam, pivmecillinam, methicillin, ciclacillin, talampacillin, aspoxicillin, oxacillin, cloxacillin, dicloxacillin, flucloxacillin, nafcillin, and pivampicillin, alone or in mixture.
Among the cephalosporin, the antibacterial agent is preferably selected in the group consisting of cefatriazine, cefazolin, cefoxitin, cephalexin, cephradine, ceftizoxime, cephacetrile, cefbuperazone, cefprozil, ceftobiprole, ceftobiprole medocaril, ceftaroline, ceftaroline fosaminyl, cefalonium, cefminox, ceforanide, cefotetan, ceftibuten, cefcapene pivoxil, cefditoren pivoxil, cefdaloxime cefroxadine, ceftolozane and S-649266, cephalothin, cephaloridine, cefaclor, cefadroxil, cefamandole, cefazolin, cephalexin, cephradine, ceftizoxime, cephacetrile, cefotiam, cefotaxime, cefsulodin, cefoperazone, cefmenoxime, cefmetazole, cephaloglycin, cefonicid, cefodizime, cefpirome, ceftazidime, ceftriaxone, cefpiramide, cefbuperazone, cefozopran, cefepime, cefoselis, cefluprenam, cefuzonam, cefpimizole, cefclidine, cefixime, ceftibuten, cefdinir, cefpodoxime axetil, cefpodoxime proxetil, cefteram pivoxil, cefetamet pivoxil, cefcapene pivoxil, cefditoren pivoxil, cefuroxime, cefuroxime axetil, loracarbef, and latamoxef, alone or in mixture.
Among the carbapenem, the antibacterial agent is preferably selected in the group consisting of imipenem, doripenem, meropenem, biapenem, ertapenem, tebipenem, sulopenem, SPR994 and panipenem, alone or in mixture.
Among the monobactam the antibacterial agent is preferably selected in the group consisting of aztreonam, tigemonam, carumonam, BAL30072 and nocardicin A, alone or in mixture.
Preferably, in the pharmaceutical composition according to the invention:
Preferably, in the pharmaceutical composition according to the invention:
Preferably, in the pharmaceutical composition according to the invention the β-lactam is chosen among amoxicillin, amoxicillin-clavulanate, sultamicillin cefuroxime axetil, cefazolin, cefaclor, cefdinir, cefpodoxime proxetil, cefprozil, cephalexin, loracarbef, cefetamet, ceftibuten, tebipenem pivoxil, sulopenem, SPR994, cefixime, preferably among cefixime and cefpodoxime proxetil.
The present invention also relates to a kit comprising:
The two composition can be prepared separately each with one specific pharmaceutically acceptable carrier, and can be mix especially extemporaneity.
The present invention also refer to a compound of formula (I) or (I*) according to the invention for use as a medicine.
The present invention also refer to the use of a compound of formula (I) or (I*) according to the invention or of a composition according to the invention for the preparation of a medicine.
The present invention also provides the use of the compounds of formula (I) or (I*) on the control of bacteria. The compound according to the invention is usually used in combination with pharmaceutically acceptable excipient.
The present invention also refer to a compound of formula (I) or (I*) according to the invention for use as antibacterial agent.
The present invention also refer to a compound of formula (I) or (I*) according to the invention for use as inhibitor of beta-lactamase.
The present invention also refer to the use of a compound of formula (I) or (I*) according to the invention or of a composition according to the invention for the preparation of an antibacterial agent medicine.
The present invention also refer to the use of a compound of formula (I) or (I*) according to the invention or of a composition according to the invention for the preparation of an inhibitor of beta-lactamase medicine.
The present invention also refer to the use of a compound of formula (I) or (I*) according to the invention or of a composition according to the invention for the preparation of an antibacterial agent and inhibitor of beta-lactamase medicine.
The present invention also refer to a compound of formula (I) or (I*) or a composition according to the invention or a kit according to the invention for use for the treatment or prevention of bacterial infections.
The present invention also refer to the use of a compound of formula (I) or (I*) or a composition according to the invention for the preparation of a medicine for the treatment or prevention of bacterial infections.
The terms “prevention”, “prevent” and “preventing” as used herein are intended to mean the administration of a compound or composition according to the invention in order to prevent infection by bacteria or to prevent occurrence of related infection and/or diseases. The terms “prevention”, “prevent” and “preventing” also encompass the administration of a compound or composition according to the present invention in order preventing at least one bacterial infection, by administration to a patient susceptible to be infected, or otherwise at a risk of infection by this bacteria.
The terms “treatment”, “treat” and “treating” as used herein are intended to mean in particular the administration of a treatment comprising a compound or composition according to the present invention to a patient already suffering from an infection. The terms “treatment”, “treat” and “treating” as used herein, also refer to administering a compound or composition according to the present invention, optionally with one or more antibacterial agent, in order to:
The expression “infection” or “bacterial infection” as used herein, includes the presence of bacteria, in or on a subject, which, if its growth were inhibited, would result in a benefit to the subject. As such, the term “infection” or “bacterial infection” in addition to referring to the presence of bacteria also refers to normal flora, which is not desirable. The term “infection” includes infection caused by bacteria. Exemplary of such bacterial infection are urinary tract infection (UTI), kidney infections (pyelonephritis), gynecological and obstetrical infections, respiratory tract infection (RTI), acute exacerbation of chronic bronchitis (AECB), Community-acquired pneumonia (CAP), hospital-acquired pneumonia (HAP), ventilator associated pneumonia (VAP), intra-abdominal pneumonia (IAI), acute otitis media, acute sinusitis, sepsis, catheter-related sepsis, chancroid, chlamydia, skin infections, bacteremia.
The term “growth” as used herein, refers to the growth of one or more microorganisms and includes reproduction or population expansion of the microorganism, such as bacteria. The term also includes maintenance of on-going metabolic processes of a microorganism, including processes that keep the microorganism alive.
The bacteria are chosen amongst gram-positive bacteria or gram-negative bacteria, preferably the gram-negative bacteria.
The bacteria can be also chosen among bacteria producing “beta-lactamase” or “β-lactamase”. These bacteria are well known by the skilled person.
The term “beta-lactamase” or “β-lactamase” as used herein, refers to any enzyme or protein or any other substance that is able to break down a beta-lactam ring. The term “beta-lactamase” or “β-lactamase” includes enzymes that are produced by bacteria and that have the ability to hydrolyze, either partially or completely, the beta-lactam ring present in a compound such as an antibacterial agent.
Among the gram-positive bacteria, the bacteria according to the invention is preferably chosen among Staphylococcus, Streptococcus, Staphylococcus species (including Staphylococcus aureus, Staphylococcus epidermidis), Streptococcus species (including Streptococcus pneumonia, Streptococcus agalactiae), Enterococcus species (including Enterococcus faecalis and Enterococcus faecium).
Among the gram-negative bacteria, the bacteria according to the invention is preferably chosen among Acinetobacter species (including Acinetobacter baumannii), Citrobacter species, Escherichia species (including Escherichia coli), Haemophilus influenza, Morganella morganii, Klebsiella species (including Klebsiella pneumonia), Enterobacter species (including Enterobacter cloacae), Neisseria gonorrhoeae, Burkholderia species (including Burkholderia cepacia), Proteus species (including Proteus mirabilis), Serratia species (including Serratia marcescens), Providencia species, Pseudomonas aeruginosa.
The invention thus preferably refers to a compound of formula (I) or (I*) or a composition according to the invention or a kit according to the invention for use for the treatment or prevention of bacterial infection, preferably caused by bacteria producing one or more beta-lactamase(s). Preferably, the bacteria are chosen amongst gram-positive bacteria or gram-negative bacteria, preferably gram-negative bacteria.
The present invention also refer to the use of a compound of formula (I) or (I*) or a composition according to the invention for the preparation of a medicine for the treatment or prevention of bacterial infection, preferably caused by bacteria producing one or more beta-lactamase(s). Preferably, the bacteria are chosen amongst gram-positive bacteria or gram-negative bacteria, preferably gram-negative bacteria.
The present invention also refers to the kit as defined above, for a simultaneous, separated or sequential administration to a patient in need thereof for use for the treatment or prevention of bacterial infections, preferably caused by bacteria producing one or more beta-lactamase(s). Preferably, the bacteria are chosen amongst gram-positive bacteria or gram-negative bacteria, preferably gram-negative bacteria.
The present invention also refers to compound of formula (I) or (I*) for use in combination with one or more further antibacterial agent, preferably at least one of the further antibacterial agent is a beta lactam, for the treatment or prevention of bacterial infections, preferably caused by bacteria producing one or more beta-lactamase(s). Preferably, the bacteria are chosen amongst gram-positive bacteria or gram-negative bacteria, preferably gram-negative bacteria. Wherein the compounds of formula (I) or (I*) and the further antibacterial agent are administered simultaneously, separately or sequentially.
The present invention also refers to the use of a compound of formula (I) or (I*) or a composition according to the invention or a kit according to the invention for the prevention or treatment of bacterial infections, preferably of bacterial infection, preferably caused by bacteria producing one or more beta-lactamase(s). Preferably, the bacteria are chosen amongst gram-positive bacteria or gram-negative bacteria, preferably gram-negative bacteria.
The present invention also relates to a method for the treatment or prevention of bacterial infections, preferably caused by bacteria producing one or more beta-lactamase(s) comprising the administration of a therapeutically effective amount of compound of formula (I) or (I*), a composition according to the invention or a kit according to the invention to a patient in need thereof. Preferably, the bacteria are chosen amongst gram-positive bacteria or gram-negative bacteria, preferably gram-negative bacteria.
The term “patient” means a person or an animal at risk of being infected by bacteria or, a person or an animal being infected by bacteria, preferably by gram-positive and/or by gram-negative bacteria. As used herein, the term “patient” refers to a warm-blooded animal such as a mammal, preferably a human or a human child, who is afflicted with, or has the potential to be afflicted with one or more infections and conditions described herein. The identification of those subjects who are in need of treatment of herein-described diseases and conditions is well within the ability and knowledge of one skilled in the art. A veterinarian or a physician skilled in the art can readily identify, by the use of clinical tests, physical examination, medical/family history or biological and diagnostic tests, those subjects who are in need of such treatment.
The expression “therapeutically effective amount” or “pharmaceutically effective amount” as used herein, refer to an amount of a compound according to the invention, which when administered to a patient in need thereof, is sufficient to effect treatment for disease-states, conditions, or disorders for which the compound has utility. Such an amount would be sufficient to elicit the biological or medical response of a tissue system, or patient that is sought by a researcher or a clinician. The amount of a compound according to the invention which constitutes a “therapeutically effective amount” will vary, notably depending on the compound itself and its biological activity, the composition used for administration, the time of administration, the route of administration, the rate of excretion of the compound, the duration of the treatment, the type of disease-state or disorder being treated and its severity, drugs used in combination with or coincidentally with the compounds of the invention, and the age, body weight, general health, sex and diet of the patient. Such a “therapeutically effective amount” can be determined by one of ordinary skilled in the art having regard to its own knowledge, and this disclosure. Preferably, the compounds according to the invention are administered in an amount comprised between 0.1 to 30 g per day.
The compounds according to the invention may be provided in an aqueous physiological buffer solution for parenteral administration.
The compounds of the present invention are also capable of being administered in unit dose forms, wherein the expression “unit dose” means a single dose which is capable of being administered to a patient, and which can be readily handled and packaged, remaining as a physically and chemically stable unit dose comprising either the active compound itself, or as a pharmaceutically acceptable composition, as described hereinafter. Compounds provided herein can be formulated into pharmaceutical compositions by admixture with one or more pharmaceutically acceptable excipients. Such unit dose compositions may be prepared for use by oral administration, particularly in the form of tablets, simple capsules or soft gel capsules; or intranasally, particularly in the form of powders, nasal drops, or aerosols; or dermally, for example, topically in ointments, creams, lotions, gels or sprays, or via trans-dermal patches.
The compositions may conveniently be administered in unit dosage form and may be prepared by any of the methods well-known in the pharmaceutical art, for example, as described in Remington: The Science and Practice of Pharmacy, 20th ed.; Gennaro, A. R., Ed.; Lippincott Williams & Wilkins: Philadelphia, Pa., 2000.
Preferred formulations include pharmaceutical compositions in which a compound of the present invention is formulated for oral or parenteral administration.
For oral administration, tablets, pills, powders, capsules, troches and the like can contain one or more of any of the following ingredients, or compounds of a similar nature: a binder such as microcrystalline cellulose, or gum tragacanth; a diluent such as starch or lactose; a disintegrant such as starch and cellulose derivatives; a lubricant such as magnesium stearate; a glidant such as colloidal silicon dioxide; a sweetening agent such as sucrose or saccharin; or a flavoring agent such as peppermint, or methyl salicylate. Capsules can be in the form of a hard capsule or soft capsule, which are generally made from gelatin blends optionally blended with plasticizers, as well as a starch capsule. In addition, dosage unit forms can contain various other materials that modify the physical form of the dosage unit, for example, coatings of sugar, shellac, or enteric agents. Other oral dosage forms syrup or elixir may contain sweetening agents, preservatives, dyes, colorings, and flavorings. In addition, the active compounds may be incorporated into fast dissolved, modified-release or sustained-release preparations and formulations, and wherein such sustained-release formulations are preferably bi-modal. Preferred tablets contain lactose, cornstarch, magnesium silicate, croscarmellose sodium, povidone, magnesium stearate, or talc in any combination. For oral administration, tablets, pills, powders, capsules, troches and the like can be coated or can comprise a compound or composition enables to neutralize the gastric acid o in order for the compounds according to the invention to pass through the stomach without any degradation.
Liquid preparations for parenteral administration include sterile aqueous or non-aqueous solutions, suspensions, and emulsions. The liquid compositions may also include binders, buffers, preservatives, chelating agents, sweetening, flavoring and coloring agents, and the like. Non-aqueous solvents include alcohols, propylene glycol, polyethylene glycol, vegetable oils such as olive oil, and organic esters such as ethyl oleate. Aqueous carriers include mixtures of alcohols and water, buffered media, and saline. In particular, biocompatible, biodegradable lactide polymer, lactide/glycolide copolymer, or polyoxyethylene-polyoxypropylene copolymers may be useful excipients to control the release of the active compounds. Intravenous vehicles can include fluid and nutrient replenishers, electrolyte replenishers, such as those based on Ringer's dextrose, and the like. Other potentially useful parenteral delivery systems for these active compounds include ethylene-vinyl acetate copolymer particles, osmotic pumps, implantable infusion systems, and liposomes.
Alternative modes of administration include formulations for inhalation, which include such means as dry powder, aerosol, or drops. They may be aqueous solutions containing, for example, polyoxyethylene-9-lauryl ether, glycocholate and deoxycholate, or oily solutions for administration in the form of nasal drops, or as a gel to be applied intranasally. Formulations for buccal administration include, for example, lozenges or pastilles and may also include a flavored base, such as sucrose or acacia, and other excipients such as glycocholate. Formulations suitable for rectal administration are preferably presented as unit-dose suppositories, with a solid based carrier, and may include a salicylate. Formulations for topical application to the skin preferably take the form of an ointment, cream, lotion, paste, gel, spray, aerosol, or oil. Carriers which can be used include petroleum jelly, lanolin, polyethylene glycols, alcohols, or their combinations. Formulations suitable for transdermal administration can be presented as discrete patches and can be lipophilic emulsions or buffered, aqueous solutions, dissolved and/or dispersed in a polymer or an adhesive.
The pharmaceutical composition according to the invention can also comprise any compound or excipient for sustain release of the active compounds.
The present invention also relates to process for the preparation of compounds of formula (I) and (I*) as defined above.
Abbreviations or symbols used herein include:
The compounds of the present invention of formula (I) and (I*) can be prepared respectively by the following reaction schemes 1 to 8.
It should be understood that the processes of schemes 1 to 8 can be adapted for preparing further compounds according to the invention. Further processes for the preparation of compounds according to the invention can be derived from the processes of schemes 1 to 8.
Nucleophilic Substitution could be performed by reaction of the appropriate ester (II) with appropriate intermediate (III) in solvent such as DMSO, DMF, THF or ACN, preferably DMSO, in a presence of a base such as DBU, TEA, K2CO3 or Cs2CO3, preferably DBU. In some particular cases, preparation of compounds (III) where R1 is C(═O)NH2 and CN are respectively described in WO2003063864 (intermediate 33a) and in WO2013038330 (intermediate IX). The preparation of other compounds of formula (III) can be derived by the skilled person from WO2003063864 and WO2013038330.
Compounds of formula (V) can be obtained from compounds of formula (III) by Nucleophilic Substitution with the appropriate ester (IV), wherein PG1 is a protecting group such as ethyl, allyl or benzyl, in a solvent such as DMSO, DMF, THF or ACN, preferably DMSO and DMF, and in a presence of a base such as DBU, TEA, K2CO3 or Cs2CO3, preferably DBU and K2CO3.
Compounds of formula (VI) can be obtained from compounds of formula (V) by hydrogenolysis in a solvent such as THF, MeOH, EtOH, DCM, DMF, preferably THF, in a presence of a catalytic amount of Pd/C and in a presence or not of a base such as DIPEA or TEA, or by saponification in a solvent such as THF, H2O, MeOH, dioxane, preferably THF and H2O, in a presence of a base such as NaOH, LiOH or KOH, preferably LiOH.
Compounds of formula (I) and (I*) can be obtained from compounds of formula (VI) by Nucleophilic substitution with the appropriate compounds of formula (VII), wherein X is a leaving group such as Cl, Br, I, OTf, OMs or OTs, in a solvent such as DMSO, DMF, THF or ACN, preferably DMSO and DMF, and in a presence of a base such as DBU, TEA, K2CO3 or Cs2CO3, preferably DBU and K2CO3.
Compounds of formula (IX) can be obtained from compounds of formula (III) by Nucleophilic Substitution with the appropriate ester (VIII), wherein M is H, Li, Na or K, in a solvent such as DMSO, DMF, THF or ACN, preferably DMSO and DMF, and in a presence of a base such as DBU, TEA, K2CO3 or Cs2CO3, preferably DBU and K2CO3.
Compounds of formula (I) and (I*) can be obtained from compounds of formula (IX) by Nucleophilic substitution with the appropriate compounds of formula (VII), wherein X is a leaving group such as Cl, Br, I, OTf, OMs or OTs, in a solvent such as DMSO, DMF, THF or ACN, preferably DMSO and DMF, and in a presence or not of a base such as DBU, TEA, K2CO3 or Cs2CO3, preferably DBU and K2CO3.
Compounds (I) and (I*) could be obtained from commercially available compound (X) by following procedure D, wherein PG1 is a protecting group such as ethyl, allyl or benzyl.
Compounds (I) and (I*) could be obtained from commercially available compound (IV) by following procedure E, wherein PG1 is defined as above and PG2 is a protecting group such as TBDMS or TBDPS.
Compounds (1) and (I*) where Y2═H could be obtained from compounds (1) and (I*) where Y2≠H by hydrogenolysis in a solvent such as THF, MeOH, EtOH, DCM, DMF, preferably THF, in a presence of a catalytic amount of Pd/C and in a presence or not of a base such as DIPEA or TEA, or by saponification in a solvent such as THF, H2O, MeOH, dioxane, preferably THF and H2O, in a presence of a base such as NaOH, LiOH or KOH, preferably LiOH.
Transesterification could be performed by reaction of the appropriate ester (XI) with appropriate alcohol (XII) neat or in a solvent such as toluene or dioxane, in a presence or not of a catalytic amount of acid such as MeSO3H.
Acylation could be performed by reaction of the appropriate acyl chloride (XIII) with appropriate alcohol (XII) in a solvent such as ACN or Et2O, in a presence of a base such as pyridine or TEA.
The following examples 1, 2, 3, 12, 13, 14 and 15 are provided.
The following examples 6, 7, 8, 9, 10, 11, 16 and 17 are specifically provided for the purpose of illustrating the present invention and by no means should be interpreted to limit the scope of the present invention.
The first part represents the preparation of the compounds (intermediates and final compounds) whereas the second part describes the evaluation of antibacterial activity and bioavailability of compounds according to the invention.
In a sealed vial, a solution of ethyl 2-bromo-2,2-difluoro-acetate (2 mL, 15.6 mmol) and cyclohexanol (1.56 g, 15.6 mmol) was heated at 120° C. for 65 h. The reaction mixture was slightly concentrated. The crude was purified by chromatography on silica gel (heptane/DCM 100/0 to 50/50) to afford intermediate (1a) (1.03 g, 5.06 mmol, 32%).
1H NMR (300 MHz, CDCl3): δ (ppm) 1.30-1.46 (m, 3H), 1.51-1.65 (m, 3H), 1.74-1.82 (m, 2H), 1.88-1.93 (m, 2H), 4.97 (tt, J=3.8/8.5 Hz, 1H).
At rt, DBU (127 μL, 0.85 mmol) was slowly added to a solution of (2S,5R)-6-hydroxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carboxamide (prepared according to the procedure described in WO2003063864 compound 33a stade B) (150 mg, 0.81 mmol) and cyclohexyl 2-bromo-2,2-difluoro-acetate (1a) (416 mg, 1.62 mmol) in DMSO (1 mL). The mixture was stirred at rt for 20 min and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/Acetone 9/1 to 4/6) to afford Example 1 (84 mg, 0.23 mmol, 28%).
MS m/z ([M+H]+) 362.
1H NMR (300 MHz, CDCl3): δ (ppm) 1.23-1.46 (m, 3H), 1.49-1.64 (m, 4H), 1.72-2.05 (m, 5H), 2.11-2.20 (m, 1H), 2.38-2.45 (m, 1H), 2.98 (d, J=12.0 Hz, 1H), 3.25-3.31 (m, 1H), 3.95-3.98 (m, 1H), 4.06 (d, J=7.7 Hz, 1H), 4.97 (td, J=4.5/9.0 Hz, 1H), 5.49 (bs, 1H), 6.50 (bs, 1H).
19F NMR (282 MHz, CDCl3): δ(ppm) −83.64 (d, J=139 Hz, 1F), −83.57 (d, J=139 Hz, 1F).
In a sealed vial, a solution of ethyl 2-bromo-2,2-difluoro-acetate (1 mL, 7.8 mmol) and 4-heptanol (906 mg, 7.8 mmol) was heated at 120° C. for 60 h. The reaction mixture was slightly concentrated. The crude was purified by chromatography on silica gel (heptane/DCM 100/0 to 50/50) to afford intermediate (2a) (510 mg, 1.86 mmol, 24%).
1H NMR (300 MHz, CDCl3): δ (ppm) 0.93 (t, J=7.3 Hz, 6H), 1.28-1.47 (m, 4H), 1.54-1.75 (m, 4H), 5.07 (tt, J=4.9/7.7 Hz, 1H).
At rt, a solution of DBU (103 μL, 0.69 mmol) in DMSO (200 μL) was slowly added to a solution of (2S,5R)-6-hydroxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carboxamide (prepared according to the procedure described in WO2003063864 compound 33a stade B) (123 mg, 0.66 mmol) and intermediate (2a) (200 mg, 073 mmol) in DMSO (1 mL). The mixture was stirred at rt for 30 min and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/acetone 9/1 to 4/6) to afford Example 2 (120 mg, 0.32 mmol, 48%).
MS m/z ([M+H]+) 378.
1H NMR (300 MHz, CDCl3): δ (ppm) 0.85-0.90 (m, 6H), 1.20-1.34 (m, 4H), 1.55-1.93 (m, 7H), 2.04-2.14 (m, 1H), 3.05-3.11 (m, 1H), 3.15 (d, J=12.1 Hz, 1H), 3.84-3.94 (m, 2H), 5.01-5.10 (m, 1H), 7.38 (bs, 1H), 7.54 (bs, 1H).
19F NMR (282 MHz, CDCl3): δ(ppm) −82.31 (d, J=137.4, 1F), −81.93 (d, J=137.4, 1F).
At 0° C., Pyridine (167 μL, 2.06 mmol) was added dropwise to a suspension of 2-adamantanol (174 mg, 1.03 mmol) and 2-bromo-2,2-difluoro-acetyl chloride (230 mg, 1.13 mmol) in ACN (1 mL). The mixture was then warmed to rt, stirred for 1 h and concentrated. The residue was triturated with cyclohexane and filtered. The filtrate was concentrated to give (3a) as colorless oil (300 mg, 0.95 mmol, 94%).
1H NMR (300 MHz, CDCl3): δ (ppm) 1.58-1.67 (m, 2H), 1.73-1.84 (m, 4H), 1.85-1.96 (m, 4H), 2.01-2.17 (m, 4H), 5.12 (t, J=3.6 Hz, 1H).
At rt, DBU (850 μL, 5.67 mmol) was slowly added to a solution of (2S,5R)-6-hydroxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carboxamide (prepared according to the procedure described in WO2003063864 compound 33a stade B) (1 g, 5.4 mmol) and intermediate (3a) (1.97 g, 6.37 mmol) in DMSO (6 mL). The mixture was stirred at rt for 10 min and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/acetone 10/0 to 4/6) to provide Example 3 as white solid (820 mg, 1.98 mmol, 37%). MS m/z ([M+H]+ 414).
1H NMR (300 MHz, CDCl3): δ (ppm) 1.57-1.63 (m, 2H), 1.72-2.21 (m, 13H), 2.38-2.47 (m, 1H), 2.98 (d, J=12.0 Hz, 1H), 3.25-3.31 (m, 1H), 3.96-3.99 (m, 1H), 4.06 (d, J=7.6 Hz, 1H), 5.11-5.16 (m, 1H), 5.51 (bs, 1H), 6.51 (bs, 1H).
19F NMR (282 MHz, CDCl3): δ (ppm) −83.60 (d, J=138.6 Hz, 1F), −82.98 (d, J=138.6 Hz, 1F).
A solution of ethyl 2-bromo-2,2-difluoro-acetate (5.68 g, 28 mmol) and benzyl alcohol (2.88 g, 26.7 mmol) with a catalytic amount of methanesulfonic acid (10 mg) was heated at 120° C. for 16 h. The mixture was concentrated. The crude was purified by chromatography on silica gel (heptane/DCM 100/0 to 25/75) to afford intermediate (6a) (3.9 g, 14.7 mmol, 55%).
1H NMR (300 MHz, CDCl3): δ (ppm) 5.40 (s, 2H), 7.45 (s, 5H).
At rt, DBU (65 μL, 0.44 mmol) was slowly added to a solution of (2S,5R)-6-hydroxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carbonitrile (prepared according to the procedure described in WO2013038330 compound IX) (72 mg, 0.43 mmol) and intermediate (6a) (237 mg, 0.89 mmol) in DMSO (1 mL). The mixture was stirred at rt for 10 min and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/acetone 10/0 to 1/9) to provide intermediate (6b) as white solid (40 mg, 0.11 mmol, 26%).
MS m/z ([M+H]+ 352).
1H NMR (300 MHz, CDCl3): δ (ppm) 1.90-2.07 (m, 2H), 2.17-2.39 (m, 2H), 3.19-3.26 (m, 1H), 3.43 (d, J=12.6 Hz, 1H), 3.93 (bs, 1H), 4.46 (d, J=7.1 Hz, 1H), 5.35 (s, 2H), 7.37-7.42 (m, 5H).
19F NMR (282 MHz, CDCl3): δ (ppm) −83.20 (d, J=139.7 Hz, 1F), −82.64 (d, J=139.7 Hz, 1F).
At rt, a solution of intermediate (6b) (40 mg, 0.11 mmol) and DIPEA (57 μL, 0.33 mmol) in THF (2 mL) was purged with nitrogen. The catalyst Pd—C 10% (10 mg) was added. The mixture was purged with hydrogen, stirred for 30 min, filtered and the filtrate was concentrated. The residue was diluted with toluene and concentrated twice to give intermediate (6c) which was used in the next step without further purification.
A solution of sodium Iodide (120 mg, 0.8 mmol) in acetone (2 mL) was dropped in a solution of intermediate (6c) from step 3 in acetone (3 mL). The mixture was vigorously stirred for 16 h and then filtered off. The precipitate was washed with acetone and dried under vacuum to give Example 6 as white solid (11 mg, 0.039 mmol, 35%).
MS m/z ([M+H]+ 262).
MS m/z ([M−H]−260).
1H NMR (300 MHz, DMSO-d6): δ(ppm) 1.87-2.05 (m, 4H), 3.29 (bs, 2H), 3.97 (bs, 1H), 4.67-4.69 (m, 1H).
19F NMR (282 MHz, DMSO-d6): δ (ppm) −82.04 (d, J=131.0 Hz, 1F), −81.42 (d, J=131.0 Hz, 1F).
At 0° C., pyridine (1.81 mL, 22.5 mmol) was added dropwise to a suspension of 1-methoxy-2-methyl-2-propanol (1.71 mL, 15 mmol) and 2-bromo-2,2-difluoro-acetyl chloride (3.3 g, 17 mmol) in ACN (13 mL). The mixture was then warmed to rt, stirred for 30 minutes and concentrated. The residue was triturated with heptane and filtered. The filtrate was concentrated to give (7a) as colorless oil (1.83 g, 7 mmol, 47%).
At rt, K2CO3 (519 mg, 3.75 mmol) was added to a solution of (2S,5R)-6-hydroxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carboxamide (prepared according to the procedure described in WO2003063864 compound 33a stade B) (632 mg, 3 mmol) and intermediate (7a) (1.7 g, 6 mmol) in DMSO (3 mL). The mixture was stirred at rt for 2 h30 and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/acetone 8/2 to 5/5) to afford Example 7 (620 mg, 1.62 mmol, 50%).
MS m/z ([M+H]+) 366.
1H NMR (300 MHz, CDCl3): δ (ppm) 1.57 (d, J=4.3 Hz, 6H), 1.77-1.91 (m, 1H), 2.01 (M, 1H), 2.15 (d, J=2.7 Hz, 1H), 2.44 (m, 1H), 3.02 (d, J=11.9 Hz, 1H), 3.28-3.33 (m, 1H), 3.43 (s, 3H), 3.59 (d, J=1.1 Hz, 2H), 4.02 (d, J=3.1 Hz, 1H), 4.10 (d, J=7.7 Hz, 1H), 5.74 (s, 1H), 6.58 (s, 1H).
19F NMR (282 MHz, CDCl3): δ(ppm) −83.60 (d, J=139.2 Hz, 1F), −83.09 (d, J=139.2 Hz, 1F).
At 0° C., pyridine (1.81 mL, 22.5 mmol) was added dropwise to a suspension of 4-methyltetrahydropyran-4-ol (1.74 g, 15 mmol) and 2-bromo-2,2-difluoro-acetyl chloride (3.3 g, 17 mmol) in ACN (13 mL). The mixture was then warmed to rt, stirred for 30 minutes and concentrated. The residue was triturated with heptane and filtered. The filtrate was concentrated to give (8a) as yellow oil (1.9 g, 7 mmol, 45%).
At rt, K2CO3 (425 mg, 3.08 mmol) was added to a solution of (2S,5R)-6-hydroxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carboxamide (prepared according to the procedure described in WO2003063864 compound 33a stade B) (536 mg, 2.8 mmol) and intermediate (8a) (1.52 g, 5.5 mmol) in DMSO (3 mL). The mixture was stirred at rt for 1 h30 and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/acetone 9/1 to 5/5) to afford Example 8 (680 mg, 1.8 mmol, 62%).
MS m/z ([M+H]+) 378.
1H NMR (300 MHz, CDCl3): δ (ppm) 1.67 (s, 3H), 1.77-2.09 (m, 4H), 2.13-2.34 (m, 3H), 2.46 (dd, J=15.0, 7.0 Hz, 1H), 3.04 (d, J=12.0 Hz, 1H), 3.26-3.37 (m, 1H), 3.64-3.86 (m, 4H), 4.01 (d, J=3.1 Hz, 1H), 4.10 (d, J=7.5 Hz, 1H), 5.72 (s, 1H), 6.57 (s, 1H).
19F NMR (282 MHz, CDCl3): δ(ppm) −83.14 (d, J=137.2 Hz, 1F), −83.68 (d, J=137.2 Hz, 1F).
At 0° C., pyridine (1.94 mL, 24 mmol) was added dropwise to a suspension of 1-(2-methoxyethoxy)-2-methyl-propan-2-ol (2.4 g, 16 mmol) and 2-bromo-2,2-difluoro-acetyl chloride (3.60 g, 18 mmol) in Et2O (32 mL). The mixture was then warmed to rt, stirred for 1 h, diluted with Et2O, washed with citric acid (2*30 mL). Organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated to give (9a) as colorless oil (4.8 g, 16 mmol, 100%).
1H NMR (400 MHz, CDCl3): δ (ppm) 1.56 (s, 6H), 3.38 (s, 3H), 3.52-3.56 (m, 2H), 3.65-3.70 (m, 4H).
At rt, DBU (199 mg, 1.44 mmol) was slowly added to a solution of (2S,5R)-6-hydroxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carboxamide (prepared according to the procedure described in WO2003063864 compound 33a stade B) (1 g, 4.59 mmol) and intermediate (9a) (2.38 g, 7.81 mmol) in DMSO (4.6 mL). The mixture was stirred at rt for 1 h and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/acetone 100/0 to 40/60) to provide Example 9 as colourless oil (1.21 g, 2.95 mmol, 65%).
MS m/z ([M+H]+ 410
1H NMR (400 MHz, CDCl3): δ (ppm) 1.54 (s, 3H), 1.55 (s, 3H), 1.75-1.86 (m, 1H), 1.90-2.03 (m, 1H), 2.09-2.18 (m, 1H), 2.39 (dd, J=15.2, 7.1 Hz, 1H), 2.97 (d, J=12.0 Hz, 1H), 3.26 (dt, J=12.1, 3.2 Hz, 1H), 3.36 (s, 3H), 3.49-3.55 (m, 2H), 3.63-3.71 (m, 4H), 3.97 (q, J=3.0 Hz, 1H), 4.05 (d, J=7.7 Hz, 1H), 5.58-5.80 (m, 1H), 6.54 (s, 1H).
19F NMR (377 MHz, CDCl3): δ (ppm) −83.60 (d, J=138.9 Hz, 1F), −83.19 (d, J=138.9 Hz, 1F).
At 0° C., pyridine (1.8 mL, 22.35 mmol) was added dropwise to a suspension of 1-methoxy-2-(methoxymethyl)propan-2-ol (2 g, 14.9 mmol) and 2-bromo-2,2-difluoro-acetyl chloride (3.28 g, 17 mmol) in Et2O (40 mL). The mixture was then warmed to rt, stirred for 30 minutes and then diluted with Et2O. The organic layer was washed 3 times with citric acid 5% (15 mL), dried over sodium sulfate, filtered and concentrated to give (10a) as colorless oil (3.89 g, 13.3 mmol, 90%).
1H NMR (300 MHz, CDCl3): δ (ppm) 1.46 (s, 3H), 3.31 (s, 6H), 3.52 (d, J=10.1 Hz, 2H), 3.67 (d, J=10.1 Hz, 2H).
At rt, DBU (0.97 mL, 6.51 mmol) was slowly added to a solution of (2S,5R)-6-hydroxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carboxamide (prepared according to the procedure described in WO2003063864 compound 33a stade B) (1.15 g, 6.2 mmol) and intermediate (10a) (1.15 g, 6.2 mmol) in DMSO (5.5 mL). The mixture was stirred at rt for 1 h30 and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/acetone 9/1 to 5/5) to afford Example 10 (1.3 g, 3.29 mmol, 47%).
MS m/z ([M+H]+) 396
1H NMR (400 MHz, CDCl3): δ (ppm) 1.52 (s, 3H), 1.76-1.87 (m, 1H), 1.98 (m, 1H), 2.11-2.16 (m, 1H), 2.39 (m, 1H), 3.00 (d, J=11.9 Hz, 1H), 3.26 (dt, J=12.1, 3.1 Hz, 1H), 3.37 (s, 6H), 3.58 (dd, J=10.1, 7.5 Hz, 2H), 3.75 (dd, J=10.1, 3.3 Hz, 2H), 3.99 (t, J=3.1 Hz, 1H), 4.06 (d, J=7.7 Hz, 1H), 5.98 (s, 1H), 6.61 (s, 1H).
19F NMR (377 MHz, CDCl3): δ(ppm) −83.11 (s, 2F).
At 0° C., pyridine (1.8 mL, 22.35 mmol) was added dropwise to a solution of 4-(methoxymethyl)tetrahydropyran-4-ol (2 g, 13.7 mmol) and 2-bromo-2,2-difluoro-acetyl chloride (3.04 g, 15.73 mmol) in Et2O (40 mL). The mixture was then warmed to rt, stirred for 30 minutes and then diluted with Et2O. The organic layer was washed 3 times with citric acid 5% (15 mL), dried over sodium sulfate, filtered and concentrated to give (1a) as yellow oil (3.9 g, 12.87 mmol, 94%).
1H NMR (400 MHz, CDCl3): δ (ppm) 1.79-1.87 (m, 2H), 2.21 (dd, J=2.4, 14.7 Hz, 2H), 3.34 (s, 3H), 3.67 (td, J=2.2, 11.7 Hz, 2H), 3.72 (s, 2H), 3.79-3.84 (m, 2H).
19F NMR (377 MHz, CDCl3) δ−60.66 (s, 2F).
At rt, DBU (0.85 mL, 5.67 mmol) was slowly added to a solution of (2S,5R)-6-hydroxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carboxamide (prepared according to the procedure described in WO2003063864 compound 33a stade B) (1 g, 5.4 mmol) and intermediate (11a) (2.45 g, 8.1 mmol) in DMSO (4 mL). The mixture was stirred at rt for 20 minutes and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/acetone 9/1 to 0/10) to afford Example 11 (1.2 g, 2.94 mmol, 54%) as white powder.
MS m/z ([M+H]+) 408
1H NMR (400 MHz, DMSO-d6): δ(ppm) 1.67-1.93 (m, 5H), 1.99-2.12 (m, 3H), 3.10 (d, J=12.1 Hz, 1H), 3.5 (d, J=12.1 Hz, 1H), 3.28 (s, 3H), 3.45-3.52 (m, 2H), 3.70-3.75 (m, 3H), 3.78 (d, J=10.7 Hz, 1H), 3.88 (d, J=6.5 Hz, 1H), 3.94-3.98 (m, 1H), 7.36 (bs, 1H), 7.52 (bs, 1H).
19F NMR (282 MHz, DMSO-d6): δ(ppm) −82.2 (d, J=137.8 Hz, 1F), −81.75 (d, J=137.8 Hz, 1F).
At 0° C., Pyridine (1.4 mL, 16.5 mmol) was added dropwise to a suspension of tetrahydropyran-4-ol (1.2 g, 11 mmol) and 2-bromo-2,2-difluoro-acetyl chloride (2.58 g, 15 mmol) in ACN (10 mL). The mixture was then warmed to rt, stirred for 30 minutes and concentrated. The residue was triturated with heptane and filtered. The filtrate was concentrated to give intermediate (12a) as colorless oil (1.8 g, 7 mmol, 60%).
1H NMR (300 MHz, CDCl3): δ (ppm) 1.79-1.94 (m, 2H), 1.99-2.16 (m, 2H), 3.60-3.68 (m, 2H), 3.91-4.02 (m, 2H), 5.16-5.24 (m, 1H).
19F NMR (282 MHz, CDCl3): δ(ppm) −61.05 (s, 2F).
(2S,5R)-6-hydroxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carboxamide (prepared according to the procedure described in WO2003063864 compound 33a stade B) (859 mg, 3.91 mmol) was added to a suspension of K2CO3 (545 mg, 3.95 mmol) and intermediate (12a) (1.8 g, 6.9 mmol) in DMSO (3 mL). The mixture was stirred at rt for 2.5 hours and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/acetone 9/1 to 7/3) to afford Example 12 (107.9 mg, 0.29 mmol, 8%).
MS m/z ([M+H]+) 364.
1H NMR (300 MHz, CDCl3): δ (ppm) 1.67-2.01 (m, 6H), 2.04-2.14 (m, 1H), 2.27-2.42 (m, 1H), 2.94 (d, J=12.0 Hz, 1H), 3.18-3.25 (m, 1H), 3.47-3.55 (m, 2H), 3.81-3.94 (m, 3H), 3.99 (d, J=7.5 Hz, 1H), 5.04-5.13 (m, 1H), 5.85 (s, 1H), 6.5 (s, 1H).
19F NMR (282 MHz, CDCl3): δ(ppm) −83.58 (d, J=141.17 Hz, 1F), −83.68 (d, J=140.29 Hz, 1F).
At 0° C., Pyridine (0.50 mL, 6.25 mmol) was added dropwise to a suspension of 1,3-dimethoxypropan-2-ol (350 mg, 2.91 mmol) and 2-bromo-2,2-difluoro-acetyl chloride (650 mg, 3.35 mmol) in ACN (2.9 mL). The mixture was then warmed to rt, stirred for 1 h and concentrated. The residue was triturated with heptane and filtered. The filtrate was concentrated to give intermediate (13a) as colorless oil (620 mg, 2.25 mmol, 78%).
1H NMR (400 MHz, CDCl3) δ 3.38 (s, 6H), 3.61 (d, J=5.2 Hz, 4H), 5.29 (p, J=5.1 Hz, 1H).
At rt, K2CO3 (199 mg, 1.44 mmol) was slowly added to a solution of (2S,5R)-6-hydroxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carboxamide (prepared according to the procedure described in WO2003063864 compound 33a stade B) (310 mg, 1.31 mmol) and intermediate (13a) (620 mg, 2.24 mmol) in DMSO (1.3 mL). The mixture was stirred at rt for 4 h and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/acetone 100/0 to 50/50) to provide Example 13 as gum (102 mg, 0.27 mmol, 21%).
MS m/z ([M+H]+ 382
1H NMR (300 MHz, CDCl3) δ 1.72-1.88 (m, 1H), 1.88-2.05 (m, 1H), 2.06-2.24 (m, 1H), 2.40 (dd, J=15.1, 6.9 Hz, 1H), 2.97 (d, J=11.9 Hz, 1H), 3.21-3.30 (m, 1H), 3.36 (s, 3H), 3.37 (s, 3H), 3.53-3.66 (m, 4H), 3.94-4.01 (m, 1H), 4.06 (d, J=7.6 Hz, 1H), 5.31 (p, J=5.2 Hz, 1H), 5.69 (s, 1H), 6.53 (s, 1H).
19F NMR (282 MHz, CDCl3) δ (ppm) −82.84 (d, J=1.8 Hz, 2F).
At 0° C., pyridine (1.09 mL, 13.5 mmol) was added dropwise to a suspension of 5-methoxy-2-methyl-pentan-2-ol (1.20 g, 9 mmol) and 2-bromo-2,2-difluoro-acetyl chloride (2 g, 10 mmol) in ACN (8 mL). The mixture was then warmed to rt, stirred for 30 minutes and concentrated. The residue was triturated with heptane and filtered. The filtrate was concentrated to give intermediate (14a) as colorless oil (1.8 g, 6 mmol, 69%).
1H NMR (300 MHz, CDCl3): δ (ppm) 1.77 (s, 6H), 1.81-1.95 (m, 2H), 2.06-2.17 (m, 2H), 3.55 (s, 3H), 3.61 (t, J=6.3 Hz, 2H).
19F NMR (282 MHz, CDCl3): δ(ppm) −60.70 (s, 2F).
At rt, K2CO3 (483 mg, 3.5 mmol) was added to a solution of (2S,5R)-6-hydroxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carboxamide (prepared according to the procedure described in WO2003063864 compound 33a stade B) (555 mg, 3 mmol) and intermediate (14a) (1.8 g, 6 mmol) in DMSO (3 mL). The mixture was stirred at rt for 1 h30 and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/acetone 9/1 to 5/5) to afford Example 14 (410 mg, 1.04 mmol, 35%).
MS m/z ([M+H]+) 394.
1H NMR (300 MHz, CDCl3): δ (ppm) 1.59 (d, J=1.7 Hz, 6H), 1.63-1.70 (m, 2H), 1.80-1.95 (m, 3H), 1.97-2.08 (m, 1H), 2.13-2.25 (m, 1H), 2.45 (dd, J=15.1, 7.1 Hz, 1H), 3.02 (d, J=12.0 Hz, 1H), 3.29-3.33 (m, 1H), 3.36 (s, 3H), 3.43 (t, J=6.3 Hz, 2H), 3.99 (d, J=3.1 Hz, 1H), 4.10 (d, J=7.6 Hz, 1H), 5.64 (s, 1H), 6.57 (s, 1H).
19F NMR (282 MHz, CDCl3) δ (ppm) −83.96 and −83.47 (2s, 1F), −83.41 and −82.92 (2S, 1F).
At room temperature, a solution of trans-4-aminocyclohexanol (1 g, 8.7 mmol), imidazole (3 g, 44.5 mmol) and tert-butyldimethylsilyl chloride (3.93 g, 26.1 mmol) was stirred for 24 hours. The reaction mixture was concentrated and the crude was diluted in AcOEt. The organic extract was washed with water and brine, dried over sodium sulfate, filtered and concentrated to give intermediate (15a) as yellow liquid without further purification (2.37 g, quantitative yield).
MS m/z ([M+H]+) 230.
1H NMR (300 MHz, CDCl3): δ (ppm) 0.09 (s, 6H), 0.91 (s, 9H), 1.06-1.45 (m, 4H), 1.83 (d, J=11.3 Hz, 4H), 2.69 (tt, J=10.7, 3.6 Hz, 1H), 3.55 (tt, J=10.4, 3.9 Hz, 1H).
A solution of intermediate (15a) (1.6 g, 6.97 mmol), 1-bromopropane (12.56 mL, 139 mmol), K2CO3 (2.5 g, 18.1 mmol) and sodium iodide (1.03 g, 6.92 mmol) was stirred at 85° C. for 16 hours. The reaction mixture was diluted with AcOEt and then washed with water and brine. Organic extract was dried over sodium sulfate, filtered and concentrated. The crude was purified by column chromatography on Silica gel (heptane/AcOEt 7/3 to 5/5) to give intermediate (15b) as brown liquid (680 mg, 2.17 mmol, 32%).
MS m/z ([M+H]+) 314.
At 0° C., a solution of HCl 4N in dioxane (2.71 mL) was added to a solution of intermediate (15b) (680 mg, 2.17 mmol) in dioxane (3 mL). The reaction mixture was stirred at RT for 30 minutes, diluted with AcOEt and then cooled to 0° C. The reaction mixture was basified with NaOH 2N until pH 7 and then extracted twice with AcOEt. Organic extracts were dried over sodium sulfate, filtered and concentrated. The crude was purified by column chromatography on Silica gel (DCM/MeOH 9/1 to 8/2) to give intermediate (15c) as brown liquid (270 mg, 1.35 mmol, 62%).
MS m/z ([M+H]+) 200.
1H NMR (300 MHz, CDCl3): δ (ppm) 0.88 (t, J=7.3 Hz, 6H), 1.28 (q, J=10.9 Hz, 9H), 1.87 (s, 2H), 2.03 (d, J=10.6 Hz, 2H), 2.47 (s, 4H), 3.57 (s, 1H).
At 0° C., intermediate (15c) (270 mg, 1.35 mmol) was added to a solution of (2-bromo-2,2-difluoro-acetyl) 2-bromo-2,2-difluoro-acetate (511 mg, 1.54 mmol) in ACN (2 mL). The reaction mixture was stirred at room temperature for 30 minutes and then concentrated to give intermediate (15d) which was used in the next step as crude without further purification.
At rt, K2CO3 (745 mg, 5.4 mmol) was added to a solution of (2S,5R)-6-hydroxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carboxamide (prepared according to the procedure described in WO2003063864 compound 33a stade B) (250 mg, 1.35 mmol) and intermediate (15d) from step 4 in DMSO (2.5 mL). The mixture was stirred at rt for 2 h and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The crude was purified by chromatography on silica gel (DCM/acetone 7/3 to 0/10) to afford Example 15 (120 mg, 0.26 mmol, 20%).
MS m/z ([M+H]+) 461.
1H NMR (300 MHz, CDCl3): δ (ppm) 0.83 (t, J=7.3 Hz, 6H), 1.30-1.56 (m, 8H), 1.73-2.01 (m, 4H), 2.03-2.15 (m, 3H), 2.32-2.42 (m, 5H), 2.47-2.58 (m, 1H), 2.98 (d, J=12.0 Hz, 1H), 3.24 (d, J=12.1 Hz, 1H), 3.93 (q, J=2.9 Hz, 1H), 4.03 (d, J=7.5 Hz, 1H), 4.72-4.87 (m, 1H), 6.06 (s, 1H), 6.58 (s, 1H).
19F NMR (282 MHz, CDCl3) δ (ppm) −83.85 and −83.36 (2s, 1F), −83.32 and −82.82 (2S, 1F).
At −78° C., isobutyl chloroformate (1.13 mL, 8.69 mmol) was slowly added to a solution of (2S,5R)-6-benzyloxy-7-oxo-1,6-diazabicyclo[3.2.1]octane-2-carboxylic acid (2 g, 7.24 mmol) and N-methylmorpholine (875 μL, 7.96 mmol) in THF (50 mL). The mixture was stirred at −78° C. for 15 minutes and methanol (17 mL) was then added. Sodium borohydride (575 mg, 15.2 mmol) was added per portion at −78° C. The mixture was slowly warmed to room temperature until complete conversion to desired product. After 2 hours, DCM (100 mL) and HCl 1N (40 mL) were successively added to the mixture which was then extracted with DCM. Organic extracts were combined and successively washed with aqueous NaHCO3 sat. (50 mL) and brine. Organic extract was dried over Na2SO4, filtered and concentrated to give a crude. The crude was purified by column chromatography on SiO2 (gradient DCM/acetone 95/5 to 50/50) to give intermediate 16a (1.06 g, 4.04 mmol, 56%).
MS m/z ([M+H]+) 263.
1H-NMR (400 MHz, CDCl3) δ 1.33-1.40 (m, 1H), 1.52-1.60 (m, 1H), 1.91-2.06 (m, 3H), 2.88-2.93 (m, 1H), 3.00 (d, J=11.7 Hz, 1H), 3.33 (q, J=3.0 Hz, 1H), 3.52-3.61 (m, 2H), 3.68-3.75 (m, 1H), 4.90 (d, J=11.5 Hz, 1H), 5.05 (d, J=11.5 Hz, 1H), 7.32-7.44 (m, 5H).
At 0° C., sodium hydride 60% (37 mg, 0.915 mmol) was added per portion to a solution of intermediate (16a) (200 mg, 0.762 mmol) and methyl iodide (325 μL, 2.29 mmol) in DMF (2 mL). The mixture was stirred at 0° C. for 15 minutes. The mixture was quenched at 0° C. with water and extracted with AcOEt. Organic extract was dried over Na2SO4, filtered and concentrated. The crude was purified by column chromatography on SiO2 (gradient DCM/acetone 10/0 to 5/5) to give intermediate (16b) (80 mg, 0.29 mmol, 38%).
MS m/z ([M+H]+) 277.
1H-NMR (400 MHz, CDCl3) δ 1.54-1.66 (m, 2H), 1.93-2.05 (m, 2H), 2.90-2.94 (m, 1H), 3.15 (d, J=11.6 Hz, 1H), 3.30 (q, J=2.7 Hz, 1H), 3.36 (s, 3H), 3.52-3.59 (m, 3H), 4.89 (d, J=11.4 Hz, 1H), 5.05 (d, J=11.4 Hz, 1H), 7.33-7.44 (m, 5H).
A solution of intermediate (16b) (80 mg, 0.29 mmol) in acetone (4 mL) was purged twice with nitrogen. The catalyst Palladium on activated charcoal 10% (16 mg) was added and the mixture was purged twice with hydrogen. The mixture was vigorously stirred under hydrogen atmosphere (1 bar) for 1 hour. The mixture was filtrated. The filtrate was concentrated to give intermediate (16c) as white solid (50 mg, 0.27 mmol, 92%) which was used without further purification.
MS m/z ([M+H]+) 187.
At rt, DBU (45 μL, 0.3 mmol) was slowly added to a solution of intermediate (16c) (50 mg, 0.3 mmol) and intermediate (8a) (147 mg, 0.5 mmol) in DMSO (1.5 mL). The mixture was stirred at rt for 10 minutes and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/acetone 100/0 to 50/50) to provide Example 16 as colorless liquid (62 mg, 0.16 mmol, 61%).
MS m/z ([M+H]+) 373.
1H NMR (400 MHz, CDCl3) δ 1.61 (s, 3H), 1.64-1.72 (m, 1H), 1.73-1.89 (m, 3H), 1.95-2.04 (m, 1H), 2.08-2.15 (m, 1H), 2.16-2.22 (m, 1H), 2.23-2.28 (m, 1H), 3.14 (dt, J=2.8, 11.9 Hz, 1H), 3.39 (s, 3H), 3.43 (d, J=12.0 Hz, 1H), 3.60 (d, J=5.5 Hz, 2H), 3.62-3.78 (m, 5H), 3.93 (q, J=2.8 Hz, 1H).
19F NMR (377 MHz, CDCl3) δ−83.56 and −83.19 (2s, 1F), −83.18 and −82.81 (2s, 1F).
At rt, DBU (280 μL, 1.9 mmol) was slowly added to a solution of intermediate (16c) (317 mg, 1.7 mmol) and ethyl 2-bromo-2,2-difluoroacetate (437 μL, 3.4 mmol) in DMSO (2 mL). The mixture was stirred at rt for 10 minutes and then diluted with AcOEt. The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated. The residue was purified by chromatography on silica gel (DCM/acetone 100/0 to 50/50) to provide intermediate (17a) as colorless liquid (120 mg, 0.39 mmol, 23%).
MS m/z ([M+H]+) 309.
1H NMR (400 MHz, CDCl3) δ 1.38 (t, J=7.1 Hz, 3H), 1.64-1.71 (m, 1H), 1.80-1.88 (m, 1H), 1.95-2.05 (m, 1H), 2.09-2.16 (m, 1H), 3.15 (dt, J=2.9, 11.9 Hz, 1H), 3.38 (s, 3H), 3.41 (d, J=11.9 Hz, 1H), 3.59 (d, J=5.6 Hz, 2H), 3.65-3.71 (m, 1H), 3.93 (q, J=3.0 Hz, 1H), 4.32-4.44 (m, 2H).
19F NMR (377 MHz, CDCl3) δ-83.52 and −83.15 (2s, 1F), −83.05 and −82.68 (2s, 1F).
At −15° C., tetrabutylammonium hydroxide 30-hydrate (285 g) was added to a solution of intermediate (17a) (110 mg) in acetone (2 mL). The mixture was stirred at −15° C. for 1 hour and then concentrated under vacuum (bath at 20° C.). The aqueous residue was extracted three times with DCM. No more water was added during this operation. The organic extract was dried over Na2SO4, filtered and concentrated to give a crude which was applied on a Dowex sodium form column (Dowex® 50WX8 hydrogen form stored with an aqueous solution of 2N NaOH and washed until neutral pH with H2O). Fractions of interest were combined, frozen and lyophilized to give Example 17 as sodium salt (53 mg, 0.175 mmol, 17%).
MS m/z ([M+H]+) 281.
MS m/z ([M−H]+) 279.
1H NMR (400 MHz, CDCl3) δ 1.43-1.58 (m, 1H), 1.69-1.84 (m, 3H), 2.93 (d, J=11.9 Hz, 1H), 3.23-3.28 (m, 4H), 3.37-3.40 (m, 1H), 3.45-3.49 (m, 1H), 3.54-3.58 (m, 1H), 3.83 (d, J=3.7 Hz, 1H).
19F NMR (377 MHz, CDCl3) δ−81.76 (d, J=131.7 Hz, 1F), −81.24 (d, J=131.6 Hz, 1F).
Compound AF1, described as example 3 in patent WO2009133442, is the active form of prodrug compounds of formula (I) when Y2 is different from H as Examples 1, 2, 3 and 7 to 15. Compound AF2, or Example 6, is the active form of prodrug compound of formula (I) when Y2 is different from H.
Enzyme activity was monitored by spectrophotometric measurement of nitrocefin (NCF-TOKU-E, N005) hydrolysis at 485 nm, at room temperature and in assay buffer A: 100 mM Phosphate pH7, 2% glycerol and 0.1 mg/mL Bovine serum albumin (Sigma, B4287). Buffer A was supplemented with 100 mM NaHCO3 for several OXA-type enzymes (OXA-1, OXA-11, OXA-15 and OXA-163). Enzymes were cloned in E. coli expression vector, expressed and purified in house using classical procedures. To a transparent polystyrene plate (Corning, 3628) were added in each well 5 μL DMSO or inhibitor dilutions in DMSO and 80 μL enzyme in buffer A. Plates were immediately read at 485 nm in a microplate spectrophotometer (BioTek, Powerwave HT) to enable background subtraction. After 30 min of pre-incubation at room temperature, 155 μL of NCF (100 μM final) were finally added in each well. Final enzyme concentrations were 0.1 nM (TEM-1), 0.075 nM (SHV-1), 1.5 nM (SHV-12), 0.4 nM (CTX-M-15), 1 nM (KPC-2), 5 nM (PC1 S. aureus), 0.2 nM (P99 AmpC), 0.2 nM (CMY-37), 0.8 nM (DHA-1), 0.4 nM (AmpC P. aeruginosa), 0.2 nM (OXA-1), 1.2 nM (OXA-11), 0.4 nM (OXA-15), 0.2 nM (OXA-23), 0.4 nM (OXA-40), 0.3 nM (OXA-48), 75 nM (OXA-51), 0.5 nM (OXA-58) and 0.15 nM (OXA-163). After 20 min incubation at room temperature, plates were once again read at 485 nm. Enzyme activity was obtained by subtracting the background from the final signal, and was converted to enzyme inhibition using non inhibited wells. IC50 curves were fitted to a classical Langmuir equilibrium model with Hill slope using XLFIT (IDBS).
Method 2: MIC of Compounds Alone and Combined with Antibacterials Against Bacterial Isolates.
Compounds of the present invention were assessed against genotyped bacterial strains (Table 3, 4) alone or in combination with an antibacterial (Table 2). In the assays, MICs of said compounds or combination of antibiotics with fixed concentrations of said compounds (4 or 8 μg/mL) were determined by the broth microdilution method according to the Clinical Laboratory Standards Institute (CLSI-M7-A7). Briefly, compounds alone according to the invention were prepared in DMSO and spotted (2 μL each) on sterile polystyrene plates (Corning, 3788). Combinations of compounds and antibiotics dilutions were prepared in DMSO and spotted (1 μL each) on sterile polystyrene plates (Corning, 3788). Log phase bacterial suspensions were adjusted to a final density of 5·105 CFU/mL in cation-adjusted Mueller-Hinton broth (ca-MHB; Becton-Dickinson and Company) and added to each well (98 μL). Microplates were incubated for 16-20 h at 35° C. in ambient air. The MIC of the compounds was defined as the lowest concentration of said compounds that prevented bacterial growth as read by visual inspection. The MIC of ATB at each compound concentration was defined as the lowest concentration of ATB that prevented bacterial growth as read by visual inspection.
Results are presented in Tables 4, 5 and 6. They show the advantage of combining antibiotics including Cefixime and Cefpodoxime with the active forms AF1 or AF2 of the prodrugs herein described to combat resistant isolates.
Escherichia coli
Klebsiella pneumoniae
Enterobacter cloacae
Enterobacter aerogenes
Citrobacter freundii
Citrobacter koseri
Citrobacter murliniae
Morganella morganii
Proteus mirabilis
Providencia rettgeri
Providencia stuartii
Klebsiella oxytoca
Serratia marcescens
Salmonella typhimurium
Intravenous (jugular) or intraduodenal catheterized Male Sprague-Dawley (SD) rats (250-270 g) were obtained from Janvier Labs (Le Genest-Saint-Isle, France). All rats were housed in a −temperature (20±2° C.) and −humidity (55%±10%) controlled room with 12 h light/dark cycle, and were acclimatized for at least 4 days before experimentation. Water and food were available ad libitum throughout the study. All rats were handled in accordance with the institutional and national guidelines for the care and use of laboratory animals.
Rats were allocated to two groups based on the administration route: intravenous or intraduodenal administration (n=3/group).
In the intravenous administration study, drugs (10 mg/kg in phosphate buffer 10 mM, pH7.4) were administered under isoflurane anesthesia via the catheter placed in the jugular vein.
In the intraduodenal administration study, drugs (20 mg/kg in phosphate buffer 10 mM, pH5.0, 30-35% hydroxyl-propyl-beta-cyclodextrin, DMSO 0-10%) were administered under isoflurane anesthesia via the catheter placed in the duodenum.
For all groups, blood samples (100 μL) were withdrawn from the tail vein at 5, 10, 20, 30, 45, 60, 120 and 240 min after drug administration using Heparin-Lithium Microvette (Sarstedt, France) and immediately placed on ice. The collected blood was centrifuged at 2000×g and 4° C. for 5 min to obtain plasma. Plasma samples were stored at −80° C. until bioanalysis.
Oral bioavailability of a combination of CEFIXIME/Example 3 was determined in Male Swiss Mouse (25 g) obtained from Janvier Labs (Le Genest-Saint-Isle, France). Mouse were housed in a −temperature (20±2° C.) and −humidity (55%±10%) controlled room with 12 h light/dark cycle, and were acclimatized for at least 4 days before experimentation. Water and food were available ad libitum throughout the study. Mouse were handled in accordance with the institutional and national guidelines for the care and use of laboratory animals. CEFIXIME (10 mg/kg) and Example 3 (20 mg/kg) were formulated in citrate buffer 100 mM pH5.5, beta-cyclodextrin 40% (Roquette, France) diluted in commercial antacid Phosphalugel (1 vol citrate buffer/2 vol antacid) from Astellas Pharma (Levallois Perret, France). Drugs were administered by oral gavage using feeding needle. Blood samples (1.3 ml) were withdrawn by terminal cardiac puncture at 5, 10, 20, 40, 60, 120, 240, and 420 min after drug administration using Heparin-Lithium Microvette (Sarstedt, France) and immediately placed on ice. The collected blood was centrifuged at 2000×g and 4° C. for 5 min to obtain plasma. Plasma samples were stored at −80° C. until bioanalysis.
Method 5: Plasma samples bioanalysis and data analysis
The plasma samples (20 μl) were thawed at 0° C. The samples were protein precipitated using 3-25 fold volume of acetonitrile, shaken and centrifuged for 20 min at 15 000×g, diluted with a varying volume of deionized water, and pipetted to 96-well plates to wait for the LC-MS/MS analysis. Standard samples were prepared by spiking the blank plasma into concentrations 10-5 000 ng/ml and otherwise treated as the samples. Chromatographic separation was achieved with columns (T3 or C18 Cortex of Waters) and mobile phases according to the polarity of the drugs. Mass spectrometric detection involved electrospray ionization in the negative mode followed by multiple reaction monitoring of the drugs and internal standard transitions. Actual drug concentrations were deduced from interpolation of the standard curve. The pharmacokinetic parameters were calculated using XLfit (IDBS) and Excel (Microsoft) software, using standard non-compartmental methods. The intraduodenal bioavailability was calculated by dividing the AUC obtained from the intraduodenal administration by the AUC obtained from the intravenous administration.
As shown in Table 7, the intraduodenal administration to rats of the prodrug Examples 1, 2 and 3 leads to the effective detection in plasma of their hydrolyzed form AF1, with intraduodenal bioavailabilities always higher than 70% whereas only 8.7% is observed when AF1 itself is administered by intraduodenal route. Examples 1, 2, 3 are therefore effectively absorbed in the gastro-intestinal tract of the rats, and then effectively hydrolyzed into the active form AF1.
As shown in Table 8, the oral administration to mice of the prodrug Example 3 leads to the effective detection in plasma of its hydrolyzed form AF1, with a high oral bioavailability of 77%, while co-administered Cefixime shows 45% bioavailability. This set of data illustrates the possibility of treating bacterial infections by an oral combination of Cefixime with Example 3.
As shown in Table 9, Examples 7 to 11 and especially Examples 7 and 8 are much more stable to chemical hydrolysis at pH5 to 7.4 than AF1-Et, for which the structure is provided below, this compound being mentioned in WO2009133442. Furthermore, Examples 7 and 8 (esters) are rapidly converted into the corresponding biologically active acid AF1 in rodent, dog and more importantly in human plasma. They provide excellent AF1 intraduodenal or oral bioavailabilities in rats and mice when administered in a simple buffer vehicle (Citrate 100 mM pH5.0).
The protocol is identical to Method 3 except for the following points:
The protocol is identical to Method 4 except that the vehicle was the Citrate buffer 100 mM pH5.0.
Method 8: Hydrolysis Kinetics in Buffers or Plasma Samples at 37° C., 4 μg/ml (Table 9)
Test compounds were prepared in DMSO at 0.8 mg/ml (relative to the acid AF1). To obtain a concentration of 4 μg/ml, one microliter of test compounds or AF1 was dissolved in 199 μl of buffer or blank plasma. For test compounds, plasma samples and/or buffer samples were kept at 37° C. during 2 h, and 20 μL of mixture were collected at 0 minutes (before heating to 37° C.), 5 minutes, 10 minutes, 20 minutes, 30 minutes, 45 minutes, 60 minutes and 120 minutes. For AF1, 20 μl of plasma samples and/or buffer samples were collected at 0 minutes. All plasma samples were protein precipitated using 3-25 fold volume of acetonitrile, shaken and centrifuged for 20 minutes at 15 000×g, diluted with a varying volume of deionized water. All buffer samples were diluted with a varying volume of deionized water/acetonitrile. The formation of AF1 from test compounds was quantified using LC-MS/MS.
Method 9: Hydrolysis Kinetics in Buffers at Room Temperature by 19F-NMR, 1 mg/ml (Table 9)
Samples were prepared by solubilizing the ester compound (1 mg) in 900 μL of D2O and 100 μL of adequate buffer (Citrate 100 mM pH 5, Phosphate 100 mM pH 6 and Phosphate 100 mM pH 7.4). After a short sonication to fasten solubilization, the hydrolysis curve of the esters was generated by measuring and comparing the 19F-NMR signal integrations of both species (ester compound disappearing and the acid form AF1 appearing). T10 and T50, times for respectively 10% and 50% of ester hydrolysis, were determined by interpolation of the hydrolysis curves.
As shown in Table 10, Examples 7 to 11 and especially Examples 7 and 8 are much more stable to chemical hydrolysis at pH5 to 7.4 than AF1-Et and Examples 12 to 15. The bioavailability of these compounds is low for the least stable compounds, generally around 10%, and high for the most stable ones, approximately 50% in rats (around five-fold higher) and more than 80% in mice.
The protocol is identical to Method 6 except that the rats were fasted.
The protocol is identical to Method 7 except that the mice were fasted.
As shown in Table 11, a significant bioavailability is obtained with Example 1 if entirely dissolved in 40% hydroxyl-propyl-beta-cyclodextrin. Example 1 is poorly soluble in aqueous buffers and therefore behaves as a suspension in citrate buffer, resulting in a low bioavailability.
Aqueous solubility of the compounds was determined by visual inspection at room temperature by addition of adequate amount of water until complete solubilization of 5 mg of compound.
| Number | Date | Country | Kind |
|---|---|---|---|
| 17305127.7 | Feb 2017 | EP | regional |
| 17305958.5 | Jul 2017 | EP | regional |
| Filing Document | Filing Date | Country | Kind |
|---|---|---|---|
| PCT/EP2018/052963 | 2/6/2018 | WO | 00 |
