The present disclosure relates to a nucleic acid amplification chip.
In the past, a nucleic acid amplification chip including a PCR reaction container used for polymerase chain reaction (PCR) is known. In a thermal cycler for general-purpose PCR or real-time PCR, it takes time for temperature to change due to its very large heat capacity, and PCR reaction requires one to two hours. Patent Literature 1 describes an increase in the speed of a thermal cycle by repeatedly feeding a sample solution to a plurality of temperature zones using a nucleic acid amplification chip in which a micro-flow channel is formed.
Patent Literature 2 describes a nucleic acid amplification chip in which a filter is installed in a PCR reaction container to prevent contamination such that the quality of DNA amplified by PCR does not degrade.
Here, in the nucleic acid amplification chip of Patent Literature 2, an installation portion for installing the filter is formed in the PCR reaction container, and the filter is disposed by pushing the filter into the installation portion. However, in such a configuration, air is likely to leak from a gap between the installation portion and the filter. Therefore, in order to suppress the leakage, a thickness of the filter needs to be set to a certain value or more. In this case, we have a problem that it is difficult to make the nucleic acid amplification chip thin as the thickness of the filter increases. On the other hand, when the thickness of the filter is reduced, in addition to air leakage, the inventors have also found the problem that there is a possibility that a liquid feeding device is contaminated with an evaporated sample solution (aerosol),
The present disclosure is conceived to solve such problems, and an object of the present disclosure is to provide a nucleic acid amplification chip that prevents leakage of an evaporated sample solution (aerosol) even when the thickness of a filter is reduced.
The inventors of this application have conducted intensive studies, have found that the foregoing object can be achieved by fixing the filter via a fixing portion, and have completed the present disclosure.
Namely, according to the present disclosure, there is provided a nucleic acid amplification chip including: a PCR reaction container in which a micro-flow channel through which a sample solution flows is formed; and a filter provided on at least one of an inside and an outside of the PCR reaction container with respect to the micro-flow channel. The filter is fixed to the PCR reaction container via a fixing portion.
In the nucleic acid amplification chip according to the present disclosure, a filter is provided inside or outside the PCR reaction container with respect to the micro-flow channel. Here, the filter is fixed to the PCR reaction container via the fixing portion. In this case, since the fixing portion is formed, the reliability of fixing the filter to the PCR reaction container can be improved. For this reason, the leakage of the evaporated sample solution (aerosol) from a gap between the filter and the PCR reaction container can be suppressed. Further, since the fixing portion is formed, the leakage of the evaporated sample solution (aerosol) can be suppressed without increasing the thickness of the filter, so that the filter can be made thin. As a result, the overall thickness of the nucleic acid amplification chip can also be reduced, so that the degree of freedom in designing the nucleic acid amplification chip is improved.
The fixing portion may be formed by at least one means of applying an adhesive agent, pressurizing, and heating. The fixing portion capable of sufficiently fixing the filter to the PCR reaction container can be formed by this means.
A thickness of the filter may be 1 mm or less. In this case, the thickness of the nucleic acid amplification chip can also be reduced by making the filter sufficiently thin.
The filter may be fixed to an outer side of the PCR reaction container at a communication port of the PCR reaction container, the communication port communicating with a liquid delivery mechanism. In this case, since the filter is fixed to the outer side of the PCR reaction container, the filter can be easily provided.
The fixing portion may be formed by heat fusion. In this case, unlike the case of forming the fixing portion using an adhesive agent, the fixing portion can be formed using only the filter and the PCR reaction container without using an additional member.
A material used for the filter may be polytetrafluoroethylene. In this case, it is possible to obtain the filter that absorbs less gas and that is good in heat resistance or in chemical resistance.
According to the present disclosure, it is possible to provide the nucleic acid amplification chip of which the thickness can be reduced.
Hereinafter, a nucleic acid amplification chip according to one embodiment of the present disclosure will be described with reference to the accompanying drawings. Incidentally, in the description of the drawings, the same elements are denoted by the same reference signs, and duplicate descriptions will not be repeated.
As shown in
The nucleic acid amplification chip placement portion 2 is a portion on which the nucleic acid amplification chip 50 is placed. The nucleic acid amplification chip placement portion 2 has a placement surface for placing the nucleic acid amplification chip 50. Incidentally, the placement surface of the nucleic acid amplification chip placement portion 2 may be formed of upper surfaces of the temperature regulation units 3A and 3B. Alternatively, a substrate for placing the nucleic acid amplification chip 50 on a heat source may be provided, and an upper surface of the substrate may be used as a placement surface.
Here, a configuration of the nucleic acid amplification chip 50 will be described with reference to
It is preferable that the PCR reaction container 51 for forming the micro-flow channel 60 is made of a material satisfying all or some of requirements such as (i) having relatively high thermal conductivity, (ii) being stable in a temperature range required for PCR, (iii) being resistant to corrosion by electrolyte solutions or organic solvents, (iv) having low adsorption of nucleic acids or proteins. Specifically, examples of the material of the PCR reaction container 51 (substrate 30 to be described later) include glass, quartz, silicon, and various plastics such as cycloolefin polymer (COP), but are not limited thereto.
The micro-flow channel 60 is configured, for example, by forming a groove in a surface of the PCR reaction container 51 via a method such as machining such as cutting through NC processing, injection molding, nanoimprinting, or soft lithography, and by sealing the groove with a seal (preferably, for example, a transparent seal made of polyolefin or the like). Alternatively, the micro-flow channel 60 can be formed in the PCR reaction container 51 by 3D printing. The cross-sectional shape of the micro-flow channel 60 is not particularly limited and can be a semicircular shape, a circular shape, a rectangular shape, a trapezoidal shape, or the like. In addition, a cross section of the micro-flow channel 60 can have, for example, a width of approximately 10 to 1000 μm and a depth of approximately 10 to 1000 μm. In addition, each of the width and the depth of the micro-flow channel 60 can be constant, or the width or the depth can be partially changed.
In the example shown in
The heated portions 61A and 61B are portions that are heated by the temperature regulation units 3A and 3B (refer to
The intermediate portion 62 is a portion that connects the heated portion 61A and the heated portion 61B. Namely, the heated portion 61A (namely, the denaturation temperature zone 66A) and the heated portion 61B (namely, the extension and annealing temperature zone 66B) are disposed apart from each other in a direction parallel to the surface of the PCR reaction container 51. Therefore, the intermediate portion 62 is disposed between the heated portion 61A and the heated portion 61B. In the example shown in
The connection portions 63A and 63B are portions that connect communication ports 52A and 52B for the liquid delivery mechanisms 4A and 4B (refer to
Returning to
Since the temperature regulation units 3A and 3B maintain temperatures of the denaturation temperature zone 66A and the extension and annealing temperature zone 66B at the constant temperatures, respectively, the heated portions 61A and 61B of the micro-flow channel 60 formed in the temperature zones 66A and 66B can also be maintained at corresponding temperatures. Therefore, the temperature regulation units 3A and 3B can change temperature of the sample solution that has moved to the temperature zones 66A or 66B, to desired temperatures in the temperature zones 66A or 66B, respectively.
For example, the temperature regulation unit 3A may maintain the denaturation temperature zone 66A at a temperature required for the denaturation reaction of DNA in PCR. The temperature of the denaturation temperature zone 66A is preferably in a range of approximately 90 to 100° C., more preferably approximately 95° C. The temperature regulation unit 3B may maintain the extension and annealing temperature zone 66B at a temperature required for the annealing reaction and extension reaction of DNA in PCR. The temperature of the extension and annealing temperature zone 66B is preferably in a range of approximately 40 to 75° C., more preferably in a range of approximately 55 to 65° C.
Incidentally, the temperature regulation units 3A and 3B are connected to drivers 21A and 21B and to temperature monitoring units 22A and 22B, respectively. The drivers 21A and 21B are devices that control the temperature regulation units 3A and 3B to generate heat for maintaining the temperature zones 66A and 66B at the desired temperatures, based on control signals from the control unit 10. The temperature monitoring units 22A and 22B are devices that monitor temperatures of the temperature regulation units 3A and 3B to transmit monitoring results to the control unit 10.
The liquid delivery mechanisms 4A and 4B are mechanisms that move the sample solution in the micro-flow channel 60 so as to reciprocate between the denaturation temperature zone 66A and the extension and annealing temperature zone 66B. As the liquid delivery mechanisms 4A and 4B, a mechanism is used which equalizes air pressures of an air suction portion and an air discharge portion when liquid delivery is stopped. Examples of the liquid delivery mechanisms 4A and 4B that equalize air pressures of the air suction portion and the air discharge portion when liquid delivery is stopped can include a microblower and a fan.
The liquid delivery mechanisms 4A and 4B are connected to the communication ports 52A and 52B (refer to
The detection unit 5 is a device that detects the sample solution in the nucleic acid amplification chip 50. The detection unit 5 detects the sample solution and transmits the detection result to the control unit 10. The detection unit 5 detects the sample solution between the denaturation temperature zone 66A and the extension and annealing temperature zone 66B in the nucleic acid amplification chip 50. Specifically, the detection unit 5 detects the sample solution in a detection region 67 in the vicinity of the center of the intermediate portion 62 of the micro-flow channel 60 (refer to
The control unit 10 includes a heating control unit 11, a signal detection unit 12, and a liquid delivery mechanism control unit 13. The heating control unit 11 controls the temperature regulation units 3A and 3B such that the temperatures of the denaturation temperature zone 66A and the extension and annealing temperature zone 66B are kept constant at the desired temperatures. The signal detection unit 12 receives a detection result from the detection unit 5. The liquid delivery mechanism control unit 13 controls the liquid delivery mechanisms 4A and 4B to move the sample solution in the micro-flow channel 60 as desired.
Next, a configuration around the filter 53A will be described with reference to
As shown in
The flow channel 63b opens toward the space S1 for fixing in the vicinity of a center position of a bottom surface 33a of the space forming portion 33. The filter 53A is placed on the bottom surface 33a of the space forming portion 33 to close an opening of the flow channel 63b in the vicinity of the center position. Incidentally, the flow channel 63a is connected to the space forming portion 33 at a position on an outer peripheral side of the filter 53A. With such a configuration, the filter 53A is provided inside the PCR reaction container 51 with respect to the micro-flow channel 60. Air AR supplied from the liquid delivery mechanism 4A flows from the flow channel 63a to the space S1 for fixing. Incidentally, a mode can also be adopted in which the disposition of the flow channel 63a and the flow channel 63b is reversed to open the flow channel 63a toward the space S1 for fixing in the vicinity of the center position of the bottom surface 33a of the space forming portion 33.
As shown in
The filter 53A can perform device protection on the liquid delivery mechanism 4A by preventing the evaporated sample solution (aerosol) from entering a liquid delivery mechanism 4A (refer to
Main surfaces of the films 31 and 32 toward a substrate 30 side may have a tacky property, and the films 31 and 32 may include respective functional layers showing a tacky property or an adhesive property when pressed. As the material of the films 31 and 32, for example, resin such as cyclophorefin polymer, polyester, polypropylene, polyethylene, or acrylic may be employed, and glass having a plate shape or the like may also be employed.
The filter 53A is fixed to the PCR reaction container 51 (substrate 30) via a fixing portion 55. Namely, the fixing portion 55 is formed by applying active processing work to the filter 53A, and the filter 53A is fixed by the fixing portion 55. The fixing portion 55 is formed at least at a position on an outer peripheral side with respect to the opening portion of the flow channel 63b. It is preferable that the fixing portion 55 is continuously formed over the entire circumference (without a break) of the filter 53A. Meanwhile, in some cases, the evaporated sample solution (aerosol) can be prevented from transmitting through a gap between the bottom surface 33a and a lower surface of the filter 53A. In this case, the fixing portion 55 may not be continuously formed over the entire circumference of the filter 53A, and there may be a break. For example, the fixing portions 55 each having a spot shape may be formed at a plurality of locations while being spaced apart from each other. The fixing portion 55 is formed by at least one means of applying an adhesive agent, pressurizing, and heating. For example, when the filter 53A and the bottom surface 33a are fixed with a cured adhesive layer by applying an adhesive agent, the adhesive layer and a portion of the filter 53A into which the adhesive agent sinks correspond to the fixing portion 55. When the filter 53A and the bottom surface 33a are fixed by pressurizing the filter 53A against the bottom surface 33a at high pressure, a portion of the filter 53A which is brought into close contact with the bottom surface 33a, and a portion at which the filter 53A bites into the material of the substrate 30 correspond to the fixing portion 55. When a contact portion between the filter 53A and the bottom surface 33a is heated, a portion of the filter 53A which is brought into close contact with the bottom surface 33a, and a portion at which the filter 53A and the substrate 30 are integrated and solidified by melting of at least of the filter 53A and the substrate 30 correspond to the fixing portion 55. Incidentally, the fixing portion 55 may be formed by a complex combination of each means.
Specifically, the fixing portion 55 may be formed by heat fusion. When heat fusion is performed, at least one of the filter 53A and the substrate 30 is melted and solidified and the filter 53A and the substrate 30 are integrated, or the filter 53A enters the material of the substrate 30, so that the portion corresponds to the fixing portion 55.
When the filter 53A is fixed, a method using a monitor can be employed. Specifically, a position of the filter 53A that is a single body before heat fusion is detected using an arm portion of an articulated robot or a commercially available machine vision system using a fixed-point camera. Thereafter, similarly, a filter-fixing position of the PCR reaction container 51 is detected using the camera. The articulated robot that is automatically controlled picks up and places the filter at the filter-fixing position of the PCR reaction container 51, based on the detected position information. Thereafter, the filter 53A is heat-fusioned to the PCR reaction container 51 by pressing a high-temperature tip of a welding tool attached to a hand portion of the articulated robot, against the filter 53A.
In another example, as shown in
The present disclosure is not limited to the above-described examples, and when the substrate 30 is melted by heating, the filter 53A may be brought into close contact with the surface of the substrate 30 in a state where the filter 53A bites into the surface, by pressing and heating the filter 53A. In addition, when the substrate 30 is made of a material that is not melted by heating, a material that is melted by heating is selected for the filter 53A, so that the filter 53A is partially melted and brought into close contact with the substrate 30. The portion corresponds to the fixing portion 55.
The material used for the filter 53A may be polytetrafluoroethylene (PTFE). In this case, specifically, the fixing portion 55 may be formed by heat fusion in the same manner as described above. As shown in
Next, actions and effects of the nucleic acid amplification chip 50 according to the present embodiment will be described.
In the nucleic acid amplification chip 50 according to the present embodiment, the filters 53A and 53B are provided inside the PCR reaction container 51 with respect to the micro-flow channel 60. Here, the filters 53A and 53B are fixed to the PCR reaction container 51 via the respective fixing portions 55. In this case, since the fixing portions 55 are formed, the reliability of fixing the filters 53A and 53B to the PCR reaction container 51 can be improved. For this reason, the leakage of the evaporated sample solution (aerosol) from gaps between the filters 53A and 53B and the PCR reaction container 51 can be suppressed. Further, since the fixing portions 55 are formed, the leakage of the evaporated sample solution (aerosol) can be suppressed without increasing the thickness of the filters 53A and 53B, so that the filters 53A and 53B can be made thin. As a result, the overall thickness of the nucleic acid amplification chip 50 can also be reduced, so that the degree of freedom in designing the nucleic acid amplification chip 50 is improved.
In addition, for example, a method is employed in which the filters 53A and 53B are attached to the PCR reaction container 51 by forming recesses for accommodating the filters 53A and 53B in the substrate 30 and by fitting the filters 53A and 53B into the respective recesses without a gap over the entire circumferences. In the case of employing such a method, the directivity (orientation) of the filters 53A and 53B should be taken into consideration, there is no choice but to rely on labor of a worker. Namely, it is difficult to automate the manufacturing of the nucleic acid amplification chip 50. On the other hand, in the nucleic acid amplification chip 50 according to the present embodiment, since the filters 53A and 53B are fixed to the PCR reaction container 51 via the fixing portions 55 which are actively formed, manufacturing automation made easy, and the manufacturing cost can be reduced.
The fixing portions 55 may be formed by at least one means of applying an adhesive agent, pressurizing, and heating. The fixing portions 55 capable of sufficiently fixing the filters 53A and 53B to the PCR reaction container 51 can be formed by this means.
The thickness of the filters 53A and 53B may be 1 mm or less. In this case, the thickness of the nucleic acid amplification chip 50 can also be reduced by making the filters 53A and 53B sufficiently thin.
The fixing portions 55 may be formed by heat fusion. In this case, unlike the case of forming the fixing portions 55 using an adhesive agent, the fixing portions 55 can be formed using only the filters 53A and 53B and the PCR reaction container 51 without using an additional member.
The material used for the filters 53A and 53B may be polytetrafluoroethylene. In this case, it is possible to obtain the filters 53A and 53B that absorb less gas and that are good in heat resistance or in chemical resistance. As a filter made of such a material, for example, a PTFE filter (Wintech Co., Ltd. and model: PTF020) is known. When polytetrafluoroethylene is used as the material of the filter, and the filter is fixed by heat fusion, the fixing portion can be formed using only the filter and the PCR reaction container without using an additional member.
The present disclosure is not limited to the above-described embodiment.
For example, the structure for position adjustment of the filter 53A before fixing is not particularly limited, and the configurations shown in
In the example shown in
In addition, as shown in
In addition, as shown in
In addition, as shown in
In addition, as shown in
In the case of providing the filter 53A at the communication port 52A, a configuration shown in
In addition, as shown in
50: nucleic acid amplification chip, 51: PCR reaction container, 52A, 52B: communication port, 53A, 53B: filter, 55: fixing portion.
Number | Date | Country | Kind |
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2020-135820 | Aug 2020 | JP | national |
Filing Document | Filing Date | Country | Kind |
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PCT/JP2021/029405 | 8/6/2021 | WO |