Patent Grant
11884931
This application is a National Stage of International Application No. PCT/KR2021/013148 filed Sep. 27, 2021, which claims priority to Korean Patent Application No. 10-2021-0103937 filed Aug. 6, 2021, the entire disclosures of which are incorporated herein by reference.
The present disclosure relates to a development of an oncolytic virus for treating colorectal cancer, and a treatment and a therapeutic agent using the same, and more particularly, to an oncolytic virus for treating colorectal cancer using a colorectal cancer cell-specific infectious Newcastle disease virus and a composition for treating colorectal cancer using the same.
Colorectal cancer is the third most frequently occurring disease among all cancers, and is the disease with the highest mortality rate among all cancers worldwide. The incidence is rapidly increasing in Asia, including Korea, and according to 2016 Korean statistics, it has the third highest mortality rate. If colorectal cancer is detected at an early stage, the lifespan of more than 90% of subjects increases by 5 years or more, but only 40% of patients are diagnosed with colorectal cancer at an early stage. Early diagnosis of colorectal cancer is directly related to a patient's life, and remains a challenging task to date.
The rectum is the last part of the large intestine and is a pipe-shaped tube with a length of about 15 cm, and is divided from the inside into the mucosal layer, the submucosal layer, the muscular layer, and the serosal layer. Most rectal cancers are adenocarcinomas occurring in the intestinal mucosa. In addition, it is known that there are carcinoid tumors, lymphomas, sarcomas, squamous cell carcinomas, and metastatic cancers. Cancer that occurs in the colon is called colon cancer. It is also histologically most of the adenocarcinoma originating from the mucosa. Rarely, cancer is caused by neuroendocrine tumors, lymphomas, and the like. In general, colon cancer also refers to adenocarcinoma. Since most colorectal cancers have the form of polyps before they develop into adenocarcinoma, early diagnosis to detect the presence of these polyps through colonoscopy is very important. However, not all polyps develop into cancer, and the potential of malignancy is classified according to histological characteristics.
Oncolytic virus treatment is taking a new approach as a new biopharmaceutical for cancer treatment, and has made significant advances at the experimental and clinical levels. Recently, the oncolytic virus used for virus treatment uses a method of using the virus itself having oncolytic properties, a method of using a virus inserted with a gene that acts specifically for cancer cells and has an effect on killing cancer cells, or both methods.
However, the oncolytic virus cannot specifically infect specific cancer cells and cannot kill only the cancer cells. When the oncolytic virus for various cancers is injected intravenously, there is a drawback in that the concentration of the virus that infects cancer cells and acts is reduced by the dilution effect primarily caused by blood. In order to prepare for the reduction in efficacy due to the dilution effect, a very high concentration of the oncolytic virus is being used, thereby producing the effects of inducing an immune response causing secondary side effects, and reducing efficacy.
Recombinant Newcastle disease virus (NDV) used in the present disclosure is also a representative intrinsic oncolytic virus, which infects cancer cells without specific gene insertion and has various mechanisms for inducing apoptosis of cancer cells and inducing immune responses to cancer cells. Infection of cancer cells induces cancer cell death, but normal cells are also infected, and virus replication and proliferation cannot occur in normal cells due to the NDV removal function by Interferon-α. Accordingly, recombinant NDV is also an oncolytic virus without cancer cell-specific infectivity.
In NDV, cell infection is initiated by the binding of HN protein to sialic acid on the cell surface. HN protein binds to a sialic acid (glycoprotein) on the cell surface, and then cleaves the bound sialic acid by neuramidase and causes fusion of the cell membrane of host cells and the envelope of NDV virus by F protein, so that the RNA genome of the NDV virus enters the cytoplasm to infect the cell. The sialic acid binding of the HN protein binds to the sialic acid on the cell surface through four sialic acid binding motifs present in the globular head domain. Each motif is divided into HN protein-amino acid sequences 156 to 174, 171 to 203, 515 to 527, and 547 to 556, and four motifs spatially bind to sialic acid while anchored in the virus envelope. The types of cells that may be infected with the NDV virus are relatively diverse, and it may be assumed that the sialic acid binding of the HN protein is not very specific. The essential technology for developing a therapeutic agent for NDV oncolytic virus is first to construct a virus having cancer cell-specific infectivity, and second, to insert a gene that induces cancer cell death in the most optimal location.
Accordingly, in the present disclosure, an attempt was made to develop a virus capable of cancer cell-specific infection by making a mutation in the globular head domain (hereafter referred to as H domain), which is the sialic acid binding site of the HN protein using directed evolution technology, and constructing a recombinant NDV with specificity for colorectal cancer-specific cells among these mutations. In other words, it is to produce an oncolytic virus based on H domain mutant NDV vector and develop a virus preparation for colorectal cancer treatment through efficacy evaluation using the same.
The present disclosure has been made in an effort to provide a recombinant vector for constructing a colorectal cancer-targeted oncolytic virus including a Newcastle disease virus (NDV) cDNA containing a gene encoding NP, P, M, F, HN and L proteins and a gene encoding a mutation H domain (globular head domain) represented by any one of nucleotide sequences represented by SEQ ID NOS: 3 to 7.
In addition, the present disclosure has been also made in an effort to provide an oncolytic virus for treating colorectal cancer including the recombinant vector for constructing the oncolytic virus.
In addition, the present disclosure has been also made in an effort to provide a pharmaceutical composition for preventing or treating colorectal cancer including the oncolytic virus for treating colorectal cancer as an active ingredient.
In addition, the present disclosure has been also made in an effort to provide a method for selecting an H domain that specifically infects a target cancer cell.
In addition, the present disclosure has been also made in an effort to provide a method for preventing or treating colorectal cancer.
In addition, the present disclosure has been also made in an effort to provide a method for providing information for preventing or treating colorectal cancer.
In addition, the present disclosure has been also made in an effort to provide a method for evaluating an effect of preventing or treating colorectal cancer in animals.
In addition, the present disclosure has been also made in an effort to provide a method for producing a recombinant Newcastle disease virus.
An exemplary embodiment of the present disclosure provides a recombinant vector for constructing a colorectal cancer-targeted oncolytic virus including a Newcastle disease virus (NDV) cDNA containing genes encoding NP, P, M, F, HN and L proteins and a gene encoding a mutation H domain (globular head domain) represented by any one of nucleotide sequences represented by SEQ ID NOS: 3 to 7.
Another exemplary embodiment of the present disclosure provides an oncolytic virus for treating colorectal cancer including the recombinant vector for constructing the oncolytic virus.
Yet another exemplary embodiment of the present disclosure provides a pharmaceutical composition for preventing or treating colorectal cancer including the oncolytic virus for treating colorectal cancer as an active ingredient.
In addition, yet another exemplary embodiment of the present disclosure provides a method for selecting an H domain that specifically infects a target cancer cell, in which the method includes: producing a mutation H domain by randomly generating a mutation in a gene encoding the H domain of an HN protein of a Newcastle disease virus represented by a nucleotide sequence represented by SEQ ID NO: 8; fusing an avidin protein and the mutation H domain to produce a mutation H domain-avidin fusion protein; treating a target cancer cell with the H domain-avidin fusion protein; and measuring an expression level of the mutation H domain-avidin fusion protein.
In addition, yet another exemplary embodiment of the present disclosure provides a method for preventing or treating colorectal cancer, in which the method includes administering the composition to a subject excluding a human.
In addition, yet another exemplary embodiment of the present disclosure provides a method for providing information for preventing or treating colorectal cancer, in which the method includes: administering the pharmaceutical composition to a subject; and measuring and evaluating changes in cancer cells or cancer tissues of a subject.
In addition, yet another exemplary embodiment of the present disclosure provides a method for evaluating an effect of preventing or treating colorectal cancer in animals, in which the method includes administering the pharmaceutical composition to an animal excluding a human.
In addition, yet another exemplary embodiment of the present disclosure provides a method for producing a recombinant Newcastle disease virus, in which the method includes: inoculating the recombinant Newcastle disease virus into a host cell line; culturing the host cell line; and obtaining the recombinant Newcastle disease virus from a culture of the host cell line.
According to the exemplary embodiments of the present disclosure, the present disclosure uses a Newcastle disease virus (NDV) to artificially mutate the sialic acid-binding globular domain gene of the HN protein, which serves as a receptor for host cell infection, to increase colorectal cancer cell binding ability and increase colorectal cancer cell killing effect. Thus, a transgene cassette capable of introducing a gene inducing cancer apoptosis is inserted between the structural genes, making it possible to insert a foreign gene that can increase the efficacy of cancer treatment. Accordingly, by developing a colorectal cancer cell-specific oncolytic virus, a safe and effective colorectal cancer therapeutic agent was developed, which may contribute to the treatment of colorectal cancer by treating patients with colorectal cancer and inhibiting the aggravation of colorectal cancer.
Hereinafter, the present disclosure will be described in detail by way of Examples of the present disclosure with reference to the accompanying drawings. However, the following Examples are provided by way of illustration of the present disclosure. When it is determined that the specific description of known techniques or configuration well known to those skilled in the art unnecessarily obscure the gist of the present disclosure, the detailed description therefor may be omitted, and the present disclosure is not limited thereto. The present disclosure allows various modifications and applications within the description of the claims to be described later and the scope of equivalents interpreted therefrom.
Further, terminologies used herein are terms used to properly represent preferred Examples of the present disclosure. It may vary depending on the intent of users or operators, or custom in the art to which the present disclosure belongs. Accordingly, the definitions of these terms should be based on the contents throughout this specification. In the entire specification, when a part is referred to as “comprising” a component, it means that it may further include other components without excluding other components unless specifically described otherwise.
Throughout the specification, “%” used to refer to the concentration of specific substance is (weight/weight) % for solid/solid, (weight/volume) % for solid/liquid and (volume/volume) % for liquid/liquid, unless specified otherwise.
Hereinafter, the present disclosure will be described in more detail.
An embodiment of the present disclosure provides a recombinant vector for constructing a colorectal cancer-targeted oncolytic virus including a Newcastle disease virus (NDV) cDNA containing genes encoding NP, P, M, F, HN and L proteins and a mutation H domain (globular head domain).
In addition, the recombinant vector may further include a transgene cassette for foreign gene expression consisting of an IGS sequence (gene end (GE), intergenic sequence (IG), and gene start (GS)) and a multiple cloning site (MCS).
In addition, the foreign gene may be used without limitation as long as it is a foreign gene known to induce colorectal cancer apoptosis which may enhance the colorectal cancer cell death effect.
In addition, the transgene cassette is composed of a GE-IG-GS sequence and a multi cloning site (MCS) in front of the N-terminus of the foreign gene insertion site, and may be constructed by inserting the transgene cassette between the NP and P genes, between the P and M genes, and between the HN and L genes in compliance with the rule of six together with various restriction enzyme sequences. Preferably, the transgene cassette may be inserted between the NP and P genes, and between the P and M genes, and more preferably, the transgene cassette may be inserted between the NP and P genes.
In the Newcastle disease virus, an IGS (GE-IG-GS) sequence exists between each gene, and each gene undergoes a transcriptional process in the initial stage of host cell infection to synthesize a movement protein to the endoplasmic reticulum (ER) of the host cell. Then, when the amount of M protein synthesis rises above a certain level, a (+)sense RNA genome is synthesized and a (−)sense RNA genome is synthesized using this as a template. The finished virus particles are released out of the cell.
It is known that the ability of the Newcastle disease virus to introduce foreign genes is up to 6 kb, and the introduction of foreign genes has been mainly made between the P and M genes and between the HN and L genes. However, although it is known that the foreign genes may be introduced between all of the six genes, it is known that each location has an effect on mRNA expression, protein expression, and, in severe cases, virus proliferation. However, quantitative comparison tests for each location have not been performed. There is a GE-IG-GS gene between each gene. In particular, in the case of an IG gene, it is made up of 1 or 2 nucleotides between NP-P, P-M and M-F, 35 nucleotides between F-HN, and 47 nucleotides between HN-L. After virus infection, the (−)sense RNA genome synthesizes the mRNA of each protein at the initial stage of infection by the NP, P, and L proteins possessed by NDV, and the synthesized mRNA moves to the endoplasmic reticulum of the host cell to synthesize the protein of each gene. Thereafter, the (+)sense RNA genome is synthesized by the interaction of the NP, P, and L proteins with the M protein, and many copies of the (−)sense RNA genome are synthesized using this as a template and released out of the host cell. It is known that for the amount of mRNA synthesis for autologous protein production at the time of initial infection, N-terminus, in other words, NP mRNA is synthesized the most, and the mRNA synthesis decreases as it moves away from the N-terminus afterwards.
For cDNA construction of a Newcastle disease virus, a method of making the NDV (−)sense RNA genome into multiple fragments of double-stranded DNA through the reverse transcription polymerase chain reaction (RT-PCR) method, and then religating each fragment to create a cDNA clone of the entire NDV is being used. In cDNA preparation using this method, point mutation is highly likely to occur due to the nature of reverse transcriptase, so after the cDNA is finished preparing, the gene sequence of 15 kb is identified through sequencing. When one or more point mutation occur, a process of making cDNA from the NDV genome needs to be repeated again. Recombinant NDV is constructed by inserting the cDNA fragment into the pBR322 vector.
According to one embodiment of the present disclosure, the vector for constructing the colorectal cancer-targeted oncolytic virus may be constructed through an overlap cloning method after putting the transgene cassette for foreign gene expression in a perfectly made recombinant NDV between each gene, divide it into 4 fragments of DNA, ligating each NDV fragmented gene to pBR322 plasmid DNA, and then performing transformation into TOP10 E. coli to construct and store 4 types of recombinant strains, and then separating the gene from each recombinant E. coli strain when introducing a new gene and obtain a fragment of the gene using PCR, but is not limited thereto.
In addition, the vector constructed by the above method prevents point mutation that occurs during the process of making a recombinant Newcastle disease virus each time, and has a feature that a foreign gene may be easily inserted into the NDV cDNA through a multiple cloning site (MCS).
In addition, the recombinant vector of the present disclosure includes a mutant gene that enhances colorectal cancer cell-specific infection ability. The mutant gene may be a Newcastle disease virus hemagglutinin-neuraminidase (HN) gene, preferably an H domain gene of the HN protein. The mutation may be a mutation occurred in the amino acid sequences represented by SEQ ID NOS: 123 to 616 corresponding to the hemagglutinin protein-amino acid sequence of the HN protein, and more preferably, a mutation occurred in the amino acid sequences represented by SEQ ID NOS: 123 to 571 corresponding to the H domain gene.
As used herein, the term “H domain” refers to a sialic acid binding site of the HN protein of a Newcastle disease virus, and refers to a globular head domain with a length of about 51 kDa. HN protein binds to a sialic acid (glycoprotein) on the cell surface, and then cleaves the bound sialic acid by neuramidase and causes fusion of the cell membrane of host cells and the envelope of NDV virus by F protein, so that the RNA genome of the NDV virus enters the cytoplasm to infect the cell.
In addition, the mutation H domain may be represented by any one of nucleotide sequences represented by SEQ ID NOS: 3 to 7.
In addition, the mutation H domain protein encoded by a nucleotide sequence represented by SEQ ID NO: 3 may be one in which a 519th amino acid is substituted from serine to glycine.
In addition, the mutation H domain protein encoded by a nucleotide sequence represented by SEQ ID NO: 4 may be one in which a 267th amino acid is substituted from proline to glycine.
In addition, the mutation H domain protein encoded by a nucleotide sequence represented by SEQ ID NO: 5 may be one in which a 182nd amino acid is substituted from alanine to an aspartic acid.
In addition, the mutation H domain protein encoded by a nucleotide sequence represented by SEQ ID NO: 6 may be one in which a 418th amino acid is substituted from serine to proline.
In addition, in the mutation H domain protein encoded by a nucleotide sequence represented by SEQ ID NO: 7, a 319th amino acid may be substituted from glycine (serine) to alanine, a 325th amino acid may be substituted from proline to arginine, and a 392nd amino acid may be substituted from proline to histidine.
In addition, the vector for constructing the colorectal cancer-targeted oncolytic virus may be an M2-LVP-K1 vector composed of the nucleotide sequence represented by SEQ ID NO: 1, and includes a functionally equivalent substance thereto. The term “functionally equivalent substance” refers to a gene or gene combination including a sequence having at least 70%, preferably at least 80%, and more preferably at least 90% of homology with a gene sequence represented by SEQ ID NO: 1 as a result of a substitution or deletion of a nucleotide, and exhibiting substantially identical physiological activity to the gene having the gene sequence represented by SEQ ID NO: 1.
An embodiment of the present disclosure provides an oncolytic virus for treating colorectal cancer including the recombinant vector for constructing the oncolytic virus.
Since the oncolytic virus of the present disclosure includes the above-described recombinant vector for constructing the oncolytic virus, the description of the contents overlapping with the above-described recombinant vector for constructing the oncolytic virus of the present disclosure is omitted in order to avoid the excessive complexity of the present specification due to the overlapping description.
Examples of viruses that may be used for the vector for constructing the colorectal cancer-targeted oncolytic virus of the present disclosure include a lentivirus, a retrovirus, a vaccinia virus, an adenovirus, and an adeno-associated virus, a cytomegalovirus, a Sendai virus, a poxvirus, a Newcastle disease virus, and an alphavirus, but is not limited thereto. Any virus capable of expressing a protein through introduction of a foreign gene and capable of producing high stability, high expression ability and high viral titer may be used without limitation. Preferably, it may be an enveloped virus such as a vaccinia virus, a poxvirus, a flavivirus, an alphavirus, and a Newcastle disease virus, which not only transfer genes but also facilitate protein expression on the surface of the virus. More preferably, it may be a Newcastle disease virus (NDV) that is a safe virus without human infectivity and capable of producing a high viral titer, and still more preferably, a recombinant Newcastle disease virus (Accession No. KCTC14630BP).
As used herein, the term “Newcastle disease virus (NDV)” belongs to a paramyxovirus having a (−)sense RNA genome of about 15 kb and is known as a safe virus for mammals without human infectivity. NDV genomic RNA has an extragenic leader sequence of about 30 bases and a tail sequence of about 50 bases. Two sequences at both termini are known to control the transcription and replication of viral genes and the encapsidation of newly synthesized RNA genomes into viral particles. The NDV gene configuration consists of six genes including NP, P, M, F, HN and L between both terminal leaders and tail genes, and each gene encodes a nucleoprotein (NP), a phosphoprotein (P), a matrix protein (M), a fusion protein (F), a hemagglutinin-neuraminidase protein (HN), and a large protein (L).
The Newcastle disease virus is a legal infectious disease that infects chickens and causes neurological and respiratory symptoms, and is a very lethal virus for chickens. According to the pathogenicity, it is divided into velogenic, mesogenic, and lentogenic Newcastle disease viruses, all of which may be used in the production of foreign gene transfer virus vectors, but preferably mesogenic and lentogenic viruses may be used. More preferably, it may be a recombinant virus using a lentogenic virus strains.
As the Newcastle disease virus that may be used in the present disclosure, various strains such as Clone30, B1, 73T, Lasota, HJU, MTH-68, Ulster, and VG/GA may be used. Without being limited thereto, a newly isolated Newcastle disease virus may also be used, preferably Lasota, HJU, MTN-68, Ulster, and VG/GA strain, and more preferably Ulster and VG/GA strain, which are mesogenic or lentogenic viruses. Most preferably, VG/GA strain may be used, but is not limited thereto.
In addition, the recombinant Newcastle disease virus (Accession No. KCTC14630BP) may be one into which the M2-LVP-K1 vector represented by the nucleotide sequence represented by SEQ ID NO: 1 is introduced, and includes a functionally equivalent substance. The term “functionally equivalent substance” refers to a gene or gene combination including a sequence having at least 70%, preferably at least 80%, and more preferably at least 90% of homology with a gene sequence represented by SEQ ID NO: 1 as a result of a substitution or deletion of a nucleotide, and exhibiting substantially identical physiological activity to the gene having the gene sequence represented by SEQ ID NO: 2.
In addition, the oncolytic virus for treating colorectal cancer may include a mutation H domain to specifically infect colorectal cancer cells.
An embodiment of the present disclosure provides a pharmaceutical composition for preventing or treating colorectal cancer including the oncolytic virus for treating colorectal cancer as an active ingredient.
Since the pharmaceutical composition of the present disclosure includes the above-described recombinant vector for constructing the oncolytic virus, the description of the contents overlapping with the above-described recombinant vector for constructing the oncolytic virus of the present disclosure is omitted in order to avoid the excessive complexity of the present specification due to the overlapping description.
As used herein, the term “cancer” indicates a state that the abnormal cells which should be normally killed but alive and excessively proliferated by control disorder of cell itself, invade surrounding tissues and organs, to form lumps and destroy or modify the existing structure, and the cancer is used interchangeably with the malignancy.
As used herein, the term “prevention” refers to all actions that inhibit or delay progress of cancer by administering a composition of the present disclosure.
As used herein, the term “treatment” refers to all actions that alleviate or beneficially change cancer by administering a composition of the present disclosure, and refers to an approach for obtaining beneficial or desired results, including clinical results. Beneficial or desired clinical results include, but are not limited to, alleviation or amelioration of one or more symptoms or conditions, diminishment of the extent of disease, stabilization of the state of disease, prevention of development of disease, prevention of the spread of disease, delay or slowing of disease progression, delay or slowing of disease onset, amelioration or palliation of the disease state, and remission (whether partial or total). Those of ordinary skill in the technical field to which the present disclosure belongs will identify the exact criteria of a disease in which the composition of the present disclosure is effective and determine the degree of alleviation, improvement and treatment with reference to the data presented by the Korean Medical Association.
The virus of the present disclosure may be administered alone or in combination with other therapies, including chemotherapy, radiation therapy or other anti-viral therapies. For example, the virus may be administered either prior to or following surgical removal of a primary tumor or prior to, concurrently with, or following treatment such as administration of radiotherapy or conventional chemotherapeutic drugs. The virus may be administered in combination with, or in a sequential fashion with, other oncolytic viruses, which may demonstrate specificity for varying tumor cell types. Examples of the therapies conventionally used to treat, prevent or manage cancer include, but are not limited to, surgery, chemotherapy, radiation therapy, hormonal therapy, biological therapy and immunotherapy.
The pharmaceutical composition of the present disclosure is administered in a pharmaceutically effective amount. As used herein, the term “pharmaceutically effective amount” refers to an amount sufficient for the treatment of diseases at a reasonable benefit/risk ratio applicable to a medical treatment without causing any adverse effects, and the level of the effective dose may be determined based on the factors including the health conditions of a patient, type of disease(s), severity of illness, drug activity, sensitivity to drug, administration method, administration time, administration route and excretion rate, duration of treatment, factors including drug(s) to be mixed or concurrently used in combination, and other factors well known in the medical field. The composition of the present disclosure may be administered as an individual therapeutic agent, in combination with other therapeutic agents, or sequentially or simultaneously with conventional therapeutic agents, and may be administered once or multiple times. It is important to administer the composition in an amount to obtain the maximum effect with a minimum amount without adverse effects considering all of the factors described above, which may be easily determined by those skilled in the art.
As used herein, the term “subject” is not particularly limited as long as it is a subject for the purpose of preventing or treating colorectal cancer, and an animal including a human, for example, a mammal including a non-primate (for example, a cow, pig, horse, cat, dog, rat, and mouse) and a primate (for example, monkeys such as cynomolgus monkeys and chimpanzees). In some cases, it may be a subject excluding a human.
In addition, the composition of the present disclosure may be administered orally or parenterally during clinical administration, and may be used in the form of a general pharmaceutical formulation. Examples of dosage forms include, but are not limited to: oral, mucosal (for example, nasal, sublingual, vaginal, buccal, or rectal), parenteral (for example, subcutaneous, intravenous, bolus injection, intramuscular, or intraarterial), topical (for example, eyes), transdermal or transcutaneous administration. Examples of dosage forms include, but are not limited to: tablets; caplets; capsules, such as soft elastic gelatin capsules; cachets; troches; lozenges; dispersions; suppositories; powders; aerosols (for example, nasal sprays or inhalers); gels; liquid dosage forms suitable for oral or mucosal administration to a patient, including suspensions (for example, aqueous or non-aqueous liquid suspensions, oil-in-water emulsions, or water-in-oil liquid emulsions), solutions, and elixirs; liquid dosage forms suitable for injection administration to a patient; eye drops or other ophthalmic preparations suitable for topical administration; and sterile solids (for example, crystalline or amorphous solids) that can be reconstituted to provide liquid dosage forms suitable for injection administration to a patient. The composition, shape, and type of dosage forms of the present disclosure will typically vary depending on their use. For example, a dosage form used in the acute treatment of a disease may contain larger amounts of the active ingredients than a dosage form used in the chronic treatment of the same disease. Similarly, a parenteral dosage form may contain smaller amounts of the active ingredients than an oral dosage form used to treat the same disease. The dosage forms and ways compassed by the present disclosure will vary and will be readily apparent to those skilled in the art to which the present disclosure belongs (see Remington's Pharmaceutical Sciences, 18th ed., Mack Publishing, Easton PA. (1990)).
A composition containing a pharmaceutically acceptable carrier may be in various formulations such as oral or parenteral formulation. When the composition is formulated, it may be prepared by using conventionally used diluents such as fillers, extenders, binders, wetting agents, disintegrants, and surfactants, or excipients. The carriers, excipients and diluents may be at least one selected from the group consisting of lactose, dextrose, sucrose, sorbitol, mannitol, xylitol, erythritol, maltitol, starchy, acacia rubber, alginate, gelatin, calcium phosphate, calcium silicate, cellulose, methyl cellulose, microcrystalline cellulose, polyvinylpyrrolidone, physiological saline, methyl hydroxybenzoate, propyl hydroxybenzoate, talc, magnesium stearate and mineral oil, dextrin, calcium carbonate, propylene glycol, and liquid paraffin, but are not limited thereto. Any conventional carrier, excipient or diluent may be used. The components may be added independently or in combination with the active ingredient, the virus.
In addition, solid formulations for oral administration may include tablets, pills, powders, granules, capsules, and the like. These solid formulations may be prepared by mixing one or more compounds and at least one of the excipients, for example, starch, calcium carbonate, sucrose or lactose, and gelatin. Also, in addition to a simple excipient, lubricants such as magnesium stearate and talc may be used. Liquid formulations for oral administration include suspensions, liquid solutions, emulsion, and syrup, and may include various excipients, for example, wetting agents, sweeteners, fragrances, and preservatives, in addition to the commonly used simple diluents such as water and liquid paraffin.
Formulations for parenteral administration may include sterile aqueous solutions, non-aqueous solvents, suspensions, emulsions, lyophilizing agents, and suppositories. Non-aqueous solvents and suspension solvents may be vegetable oils such as propylene glycol, polyethylene glycol, and olive oil; and injectable esters such as ethyl oleate. As a base for suppositories, witepsol, macrogol, tween 61, cacao butter, laurinum, glycerol, and gelatin may be used.
In addition, the pharmaceutical composition of the present disclosure may be in any one of the formulations selected from the group consisting of tablets, pills, powders, granules, capsules, suspensions, liquid solutions, emulsions, syrups, sterile aqueous solutions, non-aqueous solvents, suspensions, emulsions, lyophilizing agents and suppositories. As a base for suppositories, witepsol, macrogol, tween 61, cacao butter, laurinum, glycerol, and gelatin may be used.
The pharmaceutical composition of the present disclosure may be administered orally or parenterally (for example, intravenous, subcutaneous, intra-abdominal, or topical administration) according to a desired method, with dosage varying in a wide range depending on the weight, age, gender, health condition, diet, time of administration, method of administration, excretion rate, and severity of disease of a patient.
The pharmaceutical composition of the present disclosure may be used alone or in combination with methods using surgery, hormonal therapy, drug therapy, and biological response modifiers for the prevention or treatment of colorectal cancer.
The composition according to the present disclosure may contain a pharmaceutically effective amount of the virus alone or may contain one or more pharmaceutically acceptable carriers, excipients or diluents. In the above, the pharmaceutically effective amount refers to an amount sufficient to prevent, improve and treat symptoms of immune diseases.
An effective amount of the virus is the amount required, at the dosages and for sufficient time period, to alleviate, improve, mitigate, ameliorate, stabilize, prevent the spread of, slow or delay the progression of or cure the disease.
For example, it may be an amount sufficient to achieve the effect of reducing the number or destroying cancerous cells or reducing the number of or destroying cells chronically infected with a virus, or inhibiting the growth and/or proliferation of such cells.
The effective amount may vary depending on many factors such as the pharmacodynamic properties of the virus, the method of administration, the age, health state and weight of the patient, the nature and extent of the disease state, the frequency of the treatment and the type of current treatment, if any, and the virulence and titer of the virus. Those skilled in the art may adjust an appropriate amount based on the above factors. The virus may be administered initially in an appropriate amount that may be adjusted as required, depending on the clinical response of a patient. The effective amount of a virus may be determined empirically and depend on the maximal amount of the virus that may be administered safely, and the minimal amount of the virus that produces a desired result.
To produce a similar clinical effect when administering the virus systemically to that achieved through injection of the virus at a disease site, administration of significantly higher amounts of a virus may be required. However, the appropriate dose level should be the minimum amount that would achieve the desired result.
The concentration of a virus to be administered will vary depending on the virulence of the virus that is to be administered and on the nature of the cells that are being targeted. Effective amounts of a virus may be given repeatedly, depending upon the effect of the initial treatment regimen. Administrations are typically given periodically, while monitoring any response. It will be recognized by those skilled in the art that lower or higher dosages than those indicated above may be given, according to the administration schedules and routes selected.
An embodiment of the present disclosure provides a method for selecting an H domain that specifically infects a target cancer cell, in which the method includes: producing a mutation H domain by randomly generating a mutation in a gene encoding the H domain of a HN protein of a Newcastle disease virus represented by a nucleotide sequence represented by SEQ ID NO: 8; fusing an avidin protein and the mutation H domain to produce a mutation H domain-avidin fusion protein; treating the target cancer cell with the H domain-avidin fusion protein; and measuring an expression level of the mutation H domain-avidin fusion protein.
In addition, the mutation may be prepared by various methods known in the pertinent field such as an error-prone PCR, a DNA shuffling method, and a site-directed mutagenesis method.
In one embodiment of the present disclosure, the mutation may be prepared by an error-prone PCR (EP-PCR) to make a random mutation. EP-PCR conditions were performed according to the protocol of the EP-PCR kit manufacturer (Agilent Co.), and it was identified that the gene fragments made after performing an EP-PCR were made the same size through agarose electrophoresis.
The mutation H domain-avidin fusion protein may be labeled with a detectable label. For example, the detectable label includes a chemical label (for example, biotin), an enzyme label (for example, horseradish peroxidase, alkaline phosphatase, peroxidase, luciferase, β-galactosidase and β-glucosidase), a radioactive label (for example, C14, 1125, P32 and S35), a fluorescence label (for example, coumarin, fluorescein, FITC (fluoresein isothiocyanate), rhodamine 6G, rhodamine B, TAMRA (6-carboxy-tetramethyl-rhodamine), Cy-3, Cy-5, Texas Red, Alexa Fluor, DAPI (4,6-diamidino-2-phenylindole), HEX, TET, Dabsyl and FAM), a luminescent label, a chemiluminescent label, FRET (fluorescence resonance energy transfer) label or a metal label (for example, gold and silver). For using the detectably labeled MSH2 protein or candidate material, a binding of MSH2 protein with the candidate material may be detected and analyzed through the signal generated by the label. For example, when alkaline phosphatase is used as a label, the signal is detected using a substrate for color developing reactions such as bromo-chloro-indolylphosphate (BCIP), nitro blue tetrazolium (NBT), naphthol-AS-B1-phosphate and ECF (enhanced chemifluorescence). When horseradish peroxidase is used as a label, the signal is detected using a substrate such as chloronaphtol, aminoethylcarbazol, diaminobenzidine, D-luciferin, lucigenin (bis-N-methylacridinium nitrate), resorufin benzyl ether, luminol, Amplex Red reagent (10-acetyl-3,7-dihydroxyphenoxazine), YR (p-phenylenediamine-HCL and pyrocatechol), TMB (tetramethylbenzidine), ABTS (2,2′-Azine-di[3-ethylbenzthiazoline sulfonate]), OPD (o-phenylenediamine) and naphthol/pyronin.
In addition, the measurement of the expression level of the protein may be performed by one or more methods selected from the group consisting of western blot, enzyme linked immunosorbent assay (ELISA), radioimmunoassay (RIA), radioimmunodiffusion, Ouchterlony immunodiffusion, rocket immunoelectrophoresis, histoimmunostaining, immunoprecipitation assay, complement fixation assay, fluorescence-activated cell sorting (FACS), and protein chips, but is not limited thereto.
In one embodiment of the present disclosure, the mutation H domain-avidin fusion protein may be screened for H domain mutants capable of specific binding to cancer cells through the difference in binding ability to the surface proteins of cancer cells through the ELISA method. Specifically, the randomly mutated H domain gene was prepared to be expressed as a recombinant fusion protein by inserting a link peptide in the middle of the avidin protein gene, and the H domain-linker-avidin (H-avidin) gene was inserted into an expression vector (pRSET-A vector). Thereafter, E. coli (BL21 strain) was transformed using a heat shock transformation method, and then E. coli was spread on a Luria bertani agar plate (containing 100 ug/ml of ampicillin) and cultured overnight in an incubator at 37° C. The colony formed after culture induced protein expression through a known ELISA method. After coating cell plasma protein on an ELISA plate, the bacterial disruption supernatant containing an H domain-avidin protein was reacted, and then a reagent bound with HRP (horseradish peroxidase) was reacted to biotin and a substrate was added to measure the optical density, so that the H domain mutant of the well showing the highest value was selected.
An embodiment of the present disclosure provides a method for preventing or treating colorectal cancer, in which the method includes administering the composition to a subject excluding a human, and a method for providing information for preventing or treating colorectal cancer, in which the method includes: administering the pharmaceutical composition to a subject; and measuring and evaluating changes in cancer cells or cancer tissues of a subject.
Since the method of the present disclosure includes the above-described pharmaceutical composition, the description of the contents overlapping with the above-described pharmaceutical composition of the present disclosure is omitted in order to avoid the excessive complexity of the present specification due to the overlapping description.
The pharmaceutical composition of the present disclosure may be administered in a therapeutically effective amount or in a pharmaceutically effective amount.
As used herein, the term “therapeutically effective amount” refers to an amount of a pharmaceutically acceptable salt of the composition effective for preventing or treating a target disease. The therapeutically effective amount of the composition of the present disclosure may be determined by considering various factors such as an administration method, a target area, and a patient condition. Thus, when used in the human body, the dosage should be determined as an appropriate amount in consideration of both safety and efficiency. It is also possible to estimate the amount used in humans from the effective amount determined through animal experiments. These factors in determining effective amounts are described, for example, in Hardman and Limbird, eds., Goodman and Gilman's The Pharmacological Basis of Therapeutics, 10th ed. (2001), Pergamon Press; and E. W. Martin ed., Remington's Pharmaceutical Sciences, 18th ed. (1990), and Mack Publishing Co.
As used herein, the term “pharmaceutically effective amount” refers to an amount sufficient for the treatment of diseases at a reasonable benefit/risk ratio applicable to a medical treatment without causing any adverse effects, and the level of the effective dose may be determined based on the factors including the health conditions of a patient, type of disease(s), severity of illness, drug activity, sensitivity to drug, administration method, administration time, administration route and excretion rate, duration of treatment, factors including drug(s) to be mixed or concurrently used in combination, and other factors well known in the medical field. The composition of the present disclosure may be administered as an individual therapeutic agent, in combination with other therapeutic agents, or sequentially or simultaneously with conventional therapeutic agents, and may be administered once or multiple times. It is important to administer the composition in an amount to obtain the maximum effect with a minimum amount without adverse effects considering all of the factors described above, which may be easily determined by those skilled in the art.
An embodiment of the present disclosure provides a method for evaluating an effect of preventing or treating colorectal cancer in animals, in which the method includes administering the pharmaceutical composition to an animal excluding a human.
In addition, the method may be evaluated by measuring changes in cancer cells or cancer tissues in animals excluding humans.
In addition, the therapeutic effect is verified by a reduction or absence of clinical manifestation normally exhibited by colorectal cancer, a faster recovery time or a lower duration, a difference in a low number of brain tumor cells in samples of blood, body fluids or organs of brain tumor cells, a reduction of brain tumor tissues, and a death of brain tumor cells.
In addition, the effective amount of the therapeutic agent means an amount capable of inducing the effect of inducing a therapeutic effect, such as reduction of clinical symptoms caused by colorectal cancer in humans, reduction of cancer cells, reduction of cancer tissue, etc., and may be appropriately selected by those skilled in the art. For example, in the case of an effect amount of a therapeutic agent containing a recombinant viral composition, an amount of the purified virus may be 105.0 TCID50/ml to 1011.0 TCID50/ml. More preferably, it may be 108.0 TCID50/ml to 109.0 TCID50/ml or more.
An embodiment of the present disclosure provides a method for producing a recombinant Newcastle disease virus (Accession No. KCTC14630BP), in which the method includes: inoculating the recombinant Newcastle disease virus into a host cell line; culturing the host cell line; and obtaining the recombinant Newcastle disease virus (Accession No. KCTC14630BP) from a culture of the host cell line.
In the present disclosure, the recombinant Newcastle disease virus (Accession No. KCTC14630BP) may be recovered through a conventional virus production method. Three types of helper plasmids (NP, P, L) and modified vaccina virus (MVA/T7) were injected into the HEp-2 cell line and cultured, followed by the recovery of the recombinant virus according to a conventional method. Transfection was performed using lipofectamine 3,000 as an injection method into the cell line, and HEp-2 cells were used as the cell line. After culturing for 3 to 4 days, the recombinant virus was recovered and inoculated into the allantoic cavity of an 8 to 10 day old SPF embryonated egg. After culturing the virus, the allantoic fluid was recovered and the virus titer was increased by culturing at least two blind passages on embryonated eggs in the same way. After purification from the allantoic fluid by a conventional purification method, it was cultured in Vero76 cells selected as an appropriate cell line and used in the experiment.
Purification of the virus proceeds clarification by centrifugation after harvesting the recombinant virus culture. Clarification may be performed by centrifugation or microfiltration. The centrifugation may be performed under the conditions of 10,000 g, 10 minutes, and 4° C. so that supernatants may be used for the next purification process. In the case of microfiltration, a filter with a pore size of 1.0 μm to 0.2 μm may be used, and a filter with a pore size of 0.45 μm may be preferably used. As the filtration method, either dead end filtration or cross flow filtration may be used, and both methods are applicable. Recombinant virus purification is possible through known methods, including extraction through chromatography or ultrafiltration method. Additional virus purification is recovered by precipitating or separating the virus by ultra-high-speed centrifugation using sucrose gradient media, and the recovered virus is resuspended in TNE buffer for use in the next process. In the purification method using chromatography, virus purification is possible through a combination of appropriate resin and buffer through a difference in binding power such as affinity, ion exchange, size exclusion, and hydrophobic. Preferably the size exclusion chromatography method will be appropriate. Recombinant viruses were purified using size exclusion chromatography, and after sample loading, absorbances at 260 nm and 280 nm were measured to select virus-containing fractions and used in the next process. The recovered fraction was recovered by precipitating or separating the virus by ultra-high speed centrifugation using sucrose gradient media, and the recovered virus was resuspended in physiological saline for injection and used in the experiment. Experiments on the cell infectivity of the purified virus were conducted on the infectivity and proliferation power of various cancer cells and normal cells according to various MOI conditions. The cell line that may be used for such an experiment may be various mammalian cell lines and cancer cells developed to date, and preferably a cancer cell line. Cancer cell lines that may be used are selected from the group consisting of T98G, HT-1197, RT-4, SW780, A673, Saos-2, SK-PN-DW, A172, Daoy, SW1108, HCC-38, BT-549, DU4475, SW1116, LS123, LoVo, COL0205, HT-29, SW480, SW620, Hela, SW626, PA-1, ME-180, THP-1, MOLT-4, C3A, SNU387, NCI-H1299, A549, NCI-H1770, NCI-H1882, CSA46, SU-DHL-2, Capan-2, HPAF-II, A375, SH-4, GCT, SNU-16, and AGS. In addition, newly established cancer cell lines may also be used without limitation.
Hereinafter, the Examples of the present disclosure will be described in more detail with reference to the accompanying drawings. However, the following Examples are only intended to embody the contents of the present disclosure, and the present disclosure will not be limited thereto.
NDV VG/GA has about 15 kb of negative-sense single-stranded RNA as genetic information and is composed of 6 ORFs, and the proteins that form a structure of the virus encode NP, P, M, F, HN and L genes. After RNA isolation using a viral RNA extraction kit (Qiagen), five pairs of primers specific to each gene were prepared and reverse transcription polymerase chain reaction (RT-PCR) was performed. Five pairs of primers specific to the gene are shown in Table 1 (showing the primers used during the insertion process using a restriction enzyme into a pBR322 vector after cDNA synthesis of the present disclosure). RT-PCR was performed at 42° C. for 1 hour and at 94° C. for 5 minutes, followed by a total of 30 cycles of 94° C. for 1 minute, 60° C. for 1 minute, and 72° C. for 1 minute, followed by reaction at 72° C. for 7 minutes. A cloning strategy for serially linking a set of cDNA fragments of four fragments is shown in
In order to increase the reconstitution efficiency of the vector, cloning was performed by locating PacI and PmeI restriction enzymes having different recognition sites and cleavage sites into a modified pBR322 vector, which is preferably a low-copy-number plasmid. The modified pBR322 vector was preferably under the control of a T7 RNA polymerase promoter, and was located so that it was terminated by the hepatitis delta virus (HDV) antigenome ribozyme and T7 terminator gene used to split RNA at the terminus of the NDV genome to enable viral encapsidation and packaging. In addition, the complete genome sequence of the NDV VG/GA strain was included to ensure accurate transcription. The produced virus was named LVP-K1 virus.
RNA-dependent RNA polymerase initiates transcription in a sequential manner by the stop-start mechanism IGS (GE-IG-GS) between genes. In GS, the transcriptional reinitiation is not complete, so the level of transcription of mRNA located at the 3′ terminus is high. Accordingly, the closer the 3′ terminus, the higher the mRNA transcription level, and the level decreases as it goes towards the 5′ terminus. Accordingly, a new foreign gene insertion between the NP gene and the P gene results in a higher level of mRNA transcription and foreign protein translation than between the P gene and the M gene and between the HN gene and the L gene, and thus the gene insertion between NP and P genes is more preferable.
2-1. Cancer Cell Specific Binding Identification Test Using Purified H Domain Mutation-Avidin Protein
The viral surface HN protein is an important antigen responsible for viral attachment to the sialic-acid receptor. HN plays an important role in the entry of viral RNA into cells by promoting membrane fusion through interaction with the F protein. HN is a type II homotetrameric membrane protein and consists of an N-terminal transmembrane domain, a linear protein domain, and a C-terminal globular head domain. Linear proteins mediate the interaction between HN and F proteins and affect fusion activity. Globular head domain (H domain) is a major functional domain of HN protein and contains receptor binding sites known as “site I” and “site II.” Site I is associated with sialic-acid receptor binding and neuraminidase activity, and site II is associated with fusion-related receptor binding and fusion. In other words, the sialic acid binding domain of HN protein plays a very important role in tissue tropism of NDV infection.
Directed evolution refers to a process of selecting a protein having a desired function by intentionally inducing a mutation with a technique for changing a nucleotide sequence by mimicking the natural selection process used in protein engineering. In other words, to improve the cancer cell affinity of the globular head domain gene of the HN protein to the sialic-acid receptor of the host cell, EP-PCR (Error prone PCR, GeneMorph II Random Mutagenesis kit, Agilent Technologies) was performed, and then the random point mutant HN-avidin gene was amplified together with the avidin gene to identify the presence of water-soluble protein using the E. coli expression system (see
The H domain is a sialic acid binding domain located at positions 123 to 571 of the amino acid sequence of the HN protein (UniProt Acc. No. P13850), and a codon-optimized gene for E. coli was synthesized using the H domain gene and the avidin gene. Precisely, the H domain gene was linked to the avidin gene using a Bam HI restriction enzyme site located at the 5′ end of the linker peptide gene and the H domain gene and a Sbf1 restriction enzyme site located at the 3′ end of the avidin gene. A linker peptide was inserted between the H domain protein and the avidin protein to avoid structural interference as much as possible. The H domain and avidin fusion protein genes were amplified using PCR using primer sets (HN opti EP PCR F:5′-TGT GGT GCG CCA ATT CAT G-3′ (SEQ ID NO: 19), HN opti avidin PCR R:5′-TTA CTC CTT CTG GGT GCG CAG-3′ (SEQ ID NO: 20)). In order to introduce the H domain and the avidin gene fragment into the vector, T4 ligase was incubated at 4° C. overnight to ligate two DNA fragments. The H domain-avidin vector (
2-2. Experiments on Binding and Specificity of H Domain Mutation-GFP Protein to Cancer Cell Surface
For the experiments to identify the HCT116-specific binding of the H-domain mutation-GFP protein using various cancer cells, comparison tests were performed on various cancer cells and normal cells in addition to the HCT116 cell line. HCT116, T98G, and A549 cells were used for cancer cells, and CCD-18Co cells were used for normal cells.
H domain and green fluorescence protein (GFP) were linked with a linker peptide to observe whether the H domain mutant was bound to the cancer cell surface and whether there was a change such as specific binding to a specific cancer cell or an increase in binding ability (affinity increase). Thus, the expression was purified through the E. coli expression system. For the H domain gene, the mutation H domain gene selected through the experiments above was used. For the GFP gene, a gene was constructed through codon optimization to be suitable for E. coli expression using the enhanced green fluorescent protein (EGFP) gene. For the constructed gene, the gene was inserted into the E. coli expression vector plasmid pET15b to construct an expression vector (
As a result, as a result of observing each well under a microscope, HCT116 cells showed the greatest number of fluorescence. It was not observed that the H domain mutation-GFP protein showed unusually high fluorescence among other cells. It may be anticipated from these results that the mutation H domain has increased binding ability to the surface proteins of HCT116 cells and that the range of surface proteins that may be bound has been expanded.
The improvement of colorectal cancer cell affinity was selected by a general ELISA method using HCT116 cells. HCT-116 cells were cultured according to the basic cell culture method. After centrifugation at 3,000 g at 4° C. for 10 minutes, the cells were resuspended in the buffer provided by the ab65400 Plasma Membrane Protein Extraction Kit (Abcam. Co.) to separate cancer cell surface proteins. Protein separation was performed according to the protocol provided by the manufacturer, and the protein concentration of the separated supernatant was measured by the lowry method. After coating the cancer cell lysates at a protein concentration of 50 ug/ml in a 96-well plate overnight at 4° C., on the next day, in order to remove unbound cancer cells, the cells were washed with a water washing solution (Tris buffer (pH 8.0 tween 0.2%)). The cells were blocked with 1% bovine serum albumin (BSA) at room temperature for 1 hour. In order to screen for the point mutant HN-avidin protein, the cells were reacted at a concentration of 50 ug/ml at 37° C. for 1 hour. Thereafter, the cells were reacted with biotin-horseradish peroxidase (HRP) 1/1,000 at 37° C. for 1 hour, and then washed 3 to 6 times with a water washing solution. A tetramethyl benzidine (TMB) peroxidase substrate was added to the plate. The plate was reacted at room temperature for 10 minutes. When the color started to change, the absorbance was measured at 450 nm (
Among a total of 50 plates, gene sequencing of five strains with high OD values at O.D. 450 nm was analyzed.
As a result of sequence analysis, it was found that in each of the five mutation H domains, a mutation occurred in which TCA (serine) of the amino acid sequence at a position 519 of the H domain represented by SEQ ID NO: 8 was substituted with GGA (glycine) (SEQ ID NO: 3, C3 of plate No. 7 of
Among them, for the gene sequence of the mutation H domain of the strain with the highest OD value, the nucleotide sequences represented by SEQ ID NO: 8 at positions 1555 and 1556 corresponding to the H domain of the LVP-K1 vector were substituted from TC to GG. For the amino acids, it was identified whether TCA (serine) was changed to GGA (glycine) (
In order to identify the binding ability between the mutation H domain (SEQ ID NO: 3)-avidin fusion protein and cancer cells, the mutation H domain-avidin protein was purified. AKTA pure (GE healthcare) equipment and Hitrap SP FF 5 ml column, a cation exchange resin, were used. For purification, 20 mM HEPES buffer (pH 6.5) and 20 mM HEPES buffer (pH 6.5) containing 1 M NaCl were used. The column connected to AKTA pure was washed in the order of 20% ethanol, distilled water, and 20 mM HEPES buffer (pH 6.5), and the protein sample to be purified was loaded at a flow rate of 1 min/ml. While checking the peak measured at 280 nm, the resin flow was received when the peak was on the rising curve, and when loading was completed, the non-binding protein in the resin was washed with 20 mM HEPES buffer (pH 6.5). When the peak was stabilized, gradient elution was performed using 20 mM HEPES buffer (pH 6.5) containing 1 M NaCl for 30 minutes in 1 ml fraction at a flow rate of 1 min/ml. The purification result was identified by performing western blotting using the fraction collected at the center of the peak measured at 280 nm (
For the H-domain mutation-avidin protein purified by the above method, the binding ability of the H-domain mutation-avidin protein was identified in colorectal cancer cells (HCT116, SW620, HT29), colorectal normal cells (CCD18-Co), other cancer cells (A547; lung cancer, T98G; glioblastoma) and normal cells (MRC-5; lung normal cells), and the results are shown in
Each cancer cell line and normal cell line was cultured using a medium recommended by ATCC. Cell culture was carried out for 2 to 3 days in a CO2 incubator at 37° C. using a 75T flask. When a full monolayer was formed, the cells were harvested and resuspended in the buffer provided by the ab65400 Plasma Membrane Protein Extraction Kit (Abcam. Co). Each cell surface plasma protein was isolated according to the protocol provided by the company. Each cell plasma protein was quantified by the lowry method, and was prepared by diluting the protein concentration in a 96 well plate to 50 ug/ml with Tris buffer (pH 8.0) for the ELISA experiment. 100 μl of protein was dispensed, incubated at 4° C. overnight, and then the solution was removed. After removing the solution, 200 μl of Tris buffer containing 0.10% tween 20 was dispensed into each well and the removal process was repeated 3 to 6 times to wash the plates. Thereafter, 100 μl of Tris buffer (pH 8.0) containing 1% bovine serum albumin was dispensed into ELISA plate wells and the blocking process was performed at room temperature for 1 hour. After removing the blocking solution, the purified H-domain mutation protein solution was diluted with Tris buffer (pH 8.0) at a concentration of 50, 100, and 200 ug/ml to be 100 μl each and dispensed into each well. After the reaction for 1 hour at room temperature, the solution was removed. 200 μl of Tris buffer (pH 8.0) containing 0.1% tween 20 was dispensed into each well and the removal process was repeated 3 to 6 times to wash the wells. Thereafter, 100 μl of biotin-labeled horseradish peroxidase protein solution diluted 1,000 times was added to each well and reacted at 4° C. for 1 hour. After removing the added solution, the well was washed 3 to 6 times with ELISA washing solution, then 50 μl of 3,3′,5,5′-tetramethylbenzidine (TMB) solution was added to proceed with production, and then 50 μl of stop solution (1.0 M H2SO4) was added to stop the reaction and O.D.450 nm was measured and compared.
As a result, the highest OD value was identified in HCT116 50 ug/ml. It was identified that it showed the lowest binding ability to lung cancer and normal lung cells. These results may support the improved binding ability specifically to colorectal cancer cells.
The LVP-K1 vector was inserted into the pBR322 vector by obtaining an insert gene of 1,499 bp from 189 bp to 1,688 bp using XbaI and SpeI restriction enzymes. Thereafter, the mutation H domain gene was purified by using a primer (Forward 5′-GGT GAG TGG AAG CAG CAC CAA G-′3 (SEQ ID NO: 21), Reverse 5′-CGG GTT ATG CGA CTG CGG G-′3 (SEQ ID NO: 22)) to obtain a PCR product. T4 kinase (NEB) was treated according to the manufacturer's recommendations, and then reacted at 16° C. using T4 ligase, mutation H domain gene (SEQ ID NO: 3) was introduced into the pBR322 vector into which the insert gene of 1,499 bp of the LVP-K1 vector was inserted, and transformed into E. coli, and colonies were obtained using LB agar (100 ug/ml ampicillin). After the obtained colonies were obtained through plasmid preparation, whole nucleotide sequence analysis was performed to identify whether TCA was changed to GGA. Through the same process as described above, an M2-LVP-K1 vector in which the serine corresponding to amino acid sequence at a position 519 of the HN gene of the LVP-K1 vector was substituted with glycine was obtained (
Individual clones (NP, P, L) of the NDV transcriptase complex were cloned into pBR322 vector and used as helper plasmids (pBR322-NP, pBR322-P, pBR322-L). On the previous day, HEp-2 cells were prepared at 5×105 cells/well in a 6-well plate, and the modified vaccinia virus (MVA-T7) was infected at 1 MOI. In the cell line, each of 2.5 μg, 1.5 μg, 0.5 μg, and 5 μg of pBR322-NP, pBR322-P, pBR322-L helper plasmid and M2-LVP-K1 vectors expressing proteins by the T7 promoter were transformed by mixing them with lipofectamine 3000 (Invitrogen) at an appropriate ratio. Thereafter, the HEp-2 cell supernatant was harvested after culture at 37° C. and 5% CO2 conditions for 3 to 4 days. Then, 9 to 11 days old SPF embryonated eggs were inoculated into the allantoic cavity, and allantoic fluid was collected 4 days after inoculation. In order to remove the vaccinia virus, the allantoic fluid diluted at 10−3 with PBS was inoculated into the allantoic cavity of 9 to 11 days old SPF embryonated eggs, respectively, and the allantoic fluid was collected 4 days after inoculation to conduct a virus identification experiment (see
For the virus identification experiment, after isolation of the allantoic fluid using a Viral RNA extraction kit (Qiagen), 5 μl of the extracted RNA and 1 μl of each of the forward and reverse primers in Table 3 below were used for reaction at 42° C. for 1 hour and at 94° C. for 5 minutes with ONE-STEP RT-PCR. Thereafter, a total of 35 cycles of reaction were carried out at 94° C. for 1 minute, at 60° C. for 1 minute, and at 72° C. for 1 minute, and then at 72° C. for 7 minutes for identification. The results are shown in
After removing the vaccinia virus, for detecting the gene of the NDV virus in the recovered LVP-K1 and M2-LVP-K1 viruses using an SPF egg, RT-PCT was performed to identify the electrophoresis result, being shown in
As a result, the vaccinia virus was removed, and Newcastle disease virus and recombinant Newcastle disease virus LVP-K1 virus and M2-LVP-K1 virus were identified.
Recombinant LVP-K1 and M2-LVP-K1 viruses recovered according to Examples 1 and 6 were inoculated in a pre-prepared Vero76 cell culture (175 T-flask, Nunc.) monolayer, and the viruses to be used for pathogenicity experiments were prepared. Before inoculation, the titers of LVP-K1 (106.7 TCID50/ml) and M2-LVP-K1 (106.5 TCID50/ml) viruses were measured and inoculated to be a 0.1 MOI. The number of Vero76 cells grown in full monolayer in a 175 T flask was 2 to 3×107.0, and 0.13 ml and 0.17 ml of each of the two flasks were diluted with 3 ml of DMEM medium and then the cells were inoculated. After virus inoculation, the medium was carefully shaken with a rocker in a CO2 incubator at 37° C. and was placed in a flask, and the virus sensitization solution was washed. The sensitization solution was washed three times. Then, 50 ml of DMEM medium (containing 10% FBS) was added and cultured for 2 days. When CPE was observed, the entire culture medium was harvested by freezing and thawing at least twice in a −20° C. freezer. After harvest, the culture medium was centrifuged (4° C., 3,000 g, 10 minutes) to remove cell debris. Thereafter, the supernatant was prepared for the experiment by collecting a sample for virus titration and freezing the sample at −80° C. The virus was used for the pathogenicity test by measuring the virus titer by the TCID50 measurement method. For the virus measurement, after dispensing Vero76 cells in a 96-well plate in 2 to 5×105 cells/ml prepared in advance, the cells were cultured for 2 to 3 days to form a monolayer, and then the cultured virus was diluted in decimal notation from the undiluted solution and 100 ul of the diluted solution thereof was inoculated and observed for 3 days again. The virus titer was measured by checking the wells in which the final CPE occurred. Virus titer was calculated according to the Reed and Muench method. The LVP-K1 virus titer was 106.7 TCID50/ml and the M2-LVP-KI virus titer was 106.3 TCID50/ml.
Median death time (MDT) was measured according to a commonly known method. As a control group, the same concentration of LVP-K1 virus was also measured. The titers of the two viruses were adjusted and used as the same titer as 106.3 TCID50/ml. The virus undiluted solution was diluted in decimal notation, 0.2 ml of each diluted solution was inoculated into the allantoic cavity of 5 SPF hatching eggs (9 to 11 days old), and then cultured in a hatching egg incubator (Ari 50) at 37° C. for 5 days. The mortality of the hatching eggs was determined by observing the blood vessel shape of the hatching eggs, and the allantoic fluid from the hatching eggs that had died was collected and the HA titer was immediately measured. For the HA measurement, 25 μl of pre-prepared allantoic fluid was diluted by two-fold in a U-shaped 96 well plate with an equal amount of PBS using 1% chicken red blood cells prepared in advance. Then, 25 μl of 1% chicken red blood cell solution was added to measure the HA titer and identify the egg death caused by the virus. When the hatching eggs die within 24 hours of incubation, it was considered as bacterial contamination. MDT test results are shown in Table 3.
As shown in Table 3, as a result of the evaluation, the hatching egg mortality by the M2-LVP-K1 virus undiluted solution was measured over 90 hours, and the mortality time varied from 120 hours to 170 hours. The average mortality time was 144 hours, and it was identified that the weak pathogenicity was maintained. On the other hand, the average mortality time of the LVP-K1 virus used as a control group was 140 hours, showing the same result as that of the VG/GA strain, which is known as 140 hours. Hatching egg mortality was not observed in the 10-fold and 100-fold diluted solution. Accordingly, the pathogenic change of the M2-LVP-K1 virus could not be identified through the MDT test.
Subsequently, in order to identify a change in the pathogenicity of the M2-LVP-K1 virus, the cerebral lesion index (ICPI, Intracerebral pathogenicity index) was measured. Table 4 shows the observed scores of the cerebral lesion index of LVP-K1 and M2-LVP-K1 recombinant viruses.
M2-LVP-K1 virus (106.3 TCID50/ml, HA titer 26 or higher) and LVP-K1 virus of the same titer which were a control were inoculated into the brains of 1-day-old SPF chickens. SPF 1-day-old chicks (company name) were individually reared and tested by 10 chicks each. Pathogenicity was measured while observing for 8 days by inoculating 0.05 ml into the brain of each SPF chick. In the measurement of pathogenicity, as for the main criteria for disease symptoms, the decrease in activity after virus inoculation and the phenomenon of the chicks closing their eyes and drowsing were mainly observed. Pathogenicity and mortality were measured and observed at least twice a day for 8 days. The ICPI index of M2-LVP-K1 of the present disclosure was 0.34, indicating weak pathogenicity, and the ICPI index of the LVP-K1 virus of the control group was also 0.36, identifying that the H domain mutant domain did not cause a change in pathogenicity.
As such, as a result of checking through MDT assay and ICPI assay, the M2-LVP-K1 virus having a mutation H domain is not a mutation capable of recovering pathogenicity, and this mutation is independent of pathogenicity. However, it may be interpreted as a result followed by increased specificity or binding ability for glycoproteins on the surface of specific cancer cells and/or expansion of the spectrum of glycoproteins that may be bound.
On the previous day, Vero76 cells were cultured at 3×105 cells/ml, and then inoculated with the recombinant virus 0.05 MOI on the next day to obtain the highest titer of the virus supernatant after 2 days. Thereafter, the virus supernatant was centrifuged at 5,000 g at 4° C. for 10 minutes to remove floating materials, and the supernatant was collected. The collected supernatant was purified by receiving a virus fraction using size exclusion chromatography column HiScreen™ Capto™ Core 400. For the chromatography method, 25 ml of samples were loaded and 20 mM Tris-HCl (pH 7.5) buffer containing 150 mM NaCl was flowed at a flow rate of 1.6 ml/min, and absorption at 260 nm and 280 nm was measured to isolate fractions. Each fraction volume was 1.0 ml, and the fraction containing a virus was fraction nos. 2 to 10, and a total of 9.0 ml thereof was isolated. The size exclusion chromatography process was performed three times to secure the virus. For concentration of the recombinant virus, ultracentrifugation was performed at 32,000 rpm at 4° C. for 3 hours, and the supernatant was removed and resuspended in TNE buffer (10 mM Tris-HCl, 20 mM NaCl, 1 mM EDTA). The concentrated virus was subjected to ultracentrifugation at 32,000 rpm at 4° C. for 2 hours using a 10 to 50% sucrose linear gradient method. After centrifugation, the white band part of the centrifugal tube was separated to obtain a recombinant virus. Finally, the obtained recombinant virus was subjected to ultracentrifugation once more at 32,000 rpm at 4° C. for 2 hours to remove sucrose and to purify recombinant Newcastle disease viruses LVP-K1 and M2-LVP-K1.
M2-LVP-K1 virus was adapted to HCT116 colorectal cancer cells and Vero76 cells, and the virus was subjected for titer measurement in HCT116 cells and Vero76 cells, respectively. Vero76 cells were cultured as follows. The cells were cultured using Dulbecco's minimum essential medium (DMEM, Gibco, USA) containing penicillin-streptomycin (Gibco, USA) and 10% FBS for cell culture, and cultured using a 175 T flask. When the cells grew to form a monolayer of 70 to 80% or more, subculture was proceeded and maintained. The split ratio of Vero76 cells may be up to 1:8 and the seeding density is 1×104 cells/ml.
The culture of HCT116 cells is as follows. HCT116 cells were cultured in Roswell Park Memorial Institute 1640 Medium (RPMI1640, Gibco, USA) containing penicillin-streptomycin (Gibco, USA) and 10% FBS for cell culture, in a 37° C. incubator (5%, CO2) using a 175 T flask. When the cells grew to form a 70 to 80% monolayer in the flask, the cells were maintained through subculture from 1:4 to 1:6. Seeding density was about 2 to 4×104 cells/ml.
In order to conduct a comparative experiment on the proliferation of LVP-K1 virus and M2-LVP-K1 virus using the prepared Vero76 cells and HCT116 cells, the culture medium of Vero76 cells and HCT116 cells that form a monolayer of 70 to 80% or more in a 75 T flask was removed. Thereafter, 10 ml of serum-free DMEM medium was put into the flask and carefully shaken to wash the cells. After repeating this process 2 or 3 times, LVP-KI virus and M2-LVP-KI virus (0.1 MOI) were put into the flask and were shaken in a 37° C. incubator at intervals of 10 minutes, and the virus was sensitized for 1 hour. After removing the virus solution, 10 ml of serum-free DMEM medium was put into the flask to remove the remaining virus solution. Then, 20 ml of DMEM medium to which 5% FBS was added was put thereinto, and the virus was collected at 48 hours to measure the virus titer by the TCID50 measurement method.
For the general TCID50 measurement method, Vero76 cells were used. However, in this study, it was also identified in HCT116 cells to compare specific binding to colorectal cancer cells as well as Vero76 cells. LVP-K1 cultured in Vero76 cells was used as a positive control group, and a higher titer was identified in Vero76 cells of which were 104.7 TCID50/ml in Vero76 cells and 103.7 TCID50/ml in HCT116 cells. M2-LVP-K1 virus cultured in Vero76 cells showed a higher titer in HCT116 cells of which were 103.7 TCID50/ml in Vero76 cells and 104.1 TCID50/ml in HCT116 cells. M2-LVP-K1 virus cultured in HCT116 cells showed a higher titer in HCT116 cells of which were 104.9 TCID50/ml in Vero76 cells and 105.5 TCID50/ml in HCT116 cells. In particular, the highest titer was identified when the titer of M2-LVP-K1 virus cultured in HCT116 cells was measured using HCT116 cells (
In order to identify the apoptosis effect of cancer cells caused by LVP-K1 and M2-LVP-K1 virus infection, the cytopathic effect (CPE) was identified and MTT assay experiment was performed. As cells for cytopathic effect (CPE) identification, colorectal cancer (HCT116), normal colorectal cells (CCD-18Co), lung cancer (A549), and glioblastoma (T98G) were used. As cells for the MTT assay, colorectal cancer (HCT116), lung cancer (A549), and glioblastoma (T98G) were used.
In order to identify the cytopathic effect (CPE) of the virus, microscopic observations were made at 3, 6, 9, and 12 hours after sensitization of LVP-K1 and M2-LVP-K1 viruses with 0.1 MOI using cells cultured on the previous day according to a general cell culture method. The cells in which CPE was identified at the fastest rate were HCT116 colorectal cancer cells sensitized with M2-LVP-K1 virus and were identified at 6 hours. On the other hand, LVP-K1 virus did not show CPE until 12 hours.
MTT assay was performed according to a conventional method and describes the detailed experimental procedure. Roswell Park Memorial Institute 1640 Medium (RPMI1640, Gibco, USA) containing penicillin, streptomycin (Gibco, USA) and 10% FBS for cell culture of 1×104 HCT116 cells per well in a 96-well plate for 24 hours was used and cultured in a 37° C. incubator (5% CO2), and LVP-K1 virus and M2-LVP-K virus were infected to be made at 0.1, 1, and 10 MOIs. For the reliability of the results, 4 wells of the same condition were prepared to proceed. After infection, the cells were cultured in a 37° C. incubator (5% CO2), and 72 hours after infection, 20 μl of MTT solution (CellTiter 96© AQueous One solution Cell Proliferation Assay, Bio-Rad, USA) was added to each well and the cells were cultured for 1 hour in an incubator (5% CO2). Cell death was measured by measuring the absorbance of light having a wavelength of 450 nm using an iMark Microplate Reader (Bio-Rad, USA). Thereafter, the relative death rate (%) to the negative control group was identified. The results are shown in
As shown in
In particular, as shown in
The cancer tissue growth inhibitory effect of LVP-K1 and M2-LVP-K1 viruses was measured using a xenograft model. 1×107 cells/ml of cultured HCT116 cells were dissolved in RPMI medium, 100 μl thereof was mixed with an equal amount of Matrigel (Corning) and inoculated into the left hip of the mouse to establish the HCT116 xenograft model. For the mice used, 12 SPF female BALB/c nude mice weighing about 14 to 19 g were purchased from SLC (Japan) and randomly divided into 4 mice per group for experiments. Each experimental group was divided into a group in which LVP-K1 virus, M2-LVP-K1 virus and PBS were directly injected into cancer tissues. The concentration of the inoculated virus was 108 TCID50/ml, and the tumor growth rate was compared between the treatment group and the control group by inoculating 100 μl each. Virus inoculation was performed three times at 3-day intervals from when the cancer tissue size reached an average of 100 to 200 mm3 on the 5th day after HCT116 cell inoculation. For 14 days after virus inoculation, changes in cancer tissues were observed every day, and the last change in cancer tissues was observed on day 27 after virus inoculation. The size of the cancer tissues was calculated using the formula ½×(smallest diameter)2×(largest diameter).
Through
It was observed that the cancer tissue was reduced most quickly and effectively in the M2-LVP-K1 virus inoculation group. In addition, as shown in
A new oncolytic virus for treating colorectal cancer was constructed using the NDV virus that does not cause an immune response in mammals and does not generate antibodies, and the effect of inhibiting cancer cell proliferation on colorectal cancer was identified. There are many NDV viruses that disappear from normal cells without reaching cancer cells due to innate immunity immediately after infection. In addition, due to the dilution effect of intravenous injection, rather than a simple recombinant virus that has been used already, it is a very important task to develop a recombinant NDV virus that is expressed as a protein in cancer cells to increase efficacy by inserting various genes for cancer cell proliferation inhibitory effect, apoptosis induction, and immune response induction. Further research will be needed in the future for further development. The present disclosure demonstrates that the NDV virus has an oncolytic function in colorectal cancer cells to some extent, and that the NDV recombinant virus with increased binding ability to colorectal cancer is constructed and the effect thereof is improved.
Hereinbefore, although specific embodiments of the present disclosure have been described in detail, those skilled in the art who understand the spirit of the present disclosure may easily suggest other embodiments included in other retrogressive embodiments or the scope of the spirit of the present disclosure by adding, modifying, or deleting other components within the scope of the same spirit. Therefore, the disclosed embodiments should be considered in an illustrative in all aspects rather than a restrictive perspective. The scope of the present disclosure is defined by the following claims rather than by the preceding description. It should be interpreted that all changes or modifications derived from the meaning and scope of the claims and their equivalents are included in the scope of the present disclosure.
Depository Institution: Korean Collection for Type Cultures (KCTC) of Korea Research Institute of Biotechnology and Bioscience
Accession No.: KCTC14630BP
Deposit Date: 2021 Jun. 30.
| Number | Date | Country | Kind |
|---|---|---|---|
| 10-2021-0103937 | Aug 2021 | KR | national |
| Filing Document | Filing Date | Country | Kind |
|---|---|---|---|
| PCT/KR2021/013148 | 9/27/2021 | WO |
| Publishing Document | Publishing Date | Country | Kind |
|---|---|---|---|
| WO2023/013812 | 2/9/2023 | WO | A |
| Number | Name | Date | Kind |
|---|---|---|---|
| 20140271677 | Palese et al. | Sep 2014 | A1 |
| Number | Date | Country |
|---|---|---|
| 10-2008-0028277 | Mar 2008 | KR |
| 10-2015-0127164 | Nov 2015 | KR |
| 10-2020-0004408 | Jan 2020 | KR |
| 2018209194 | Nov 2018 | WO |
| 2019197275 | Oct 2019 | WO |
| Entry |
|---|
| Office Action dated Apr. 25, 2022 in Korean Application No. 10-2021-0103937. |
| Office Action dated Jul. 4, 2022 in Korean Application No. 10-2021-0103937. |
| Tirumurugaan et al., “Genotypic and Pathotypic Characterization of Newcastle Disease Viruses from India”, PloS ONE, Dec. 2011, vol. 6, Issue 12, e28414, pp. 1-10 (10 pages total). |
| Rangaswamy et al., “Newcastle Disease Virus Establishes Persistent Infection in Tumor Cells In Vitro: Contribution of the Cleavage Site of Fusion Protein and Second Sialic Acid Binding Site of Hemagglutinin-Neuraminidase”, Journal of Virology, Aug. 2017, vol. 91, Issue 16, e00770-17, pp. 1-17 (17 pages total). |
| Written Decision on Registration dated Nov. 28, 2022 in Korean Application No. 10-2021-0103937. |
| Number | Date | Country | |
|---|---|---|---|
| 20230121063 A1 | Apr 2023 | US |
