One-Step, POC Sample-to-Answer Process for RNA Analysis Outside the Laboratory

Information

  • Research Project
  • 9748809
  • ApplicationId
    9748809
  • Core Project Number
    R44GM106496
  • Full Project Number
    3R44GM106496-03S1
  • Serial Number
    106496
  • FOA Number
    PA-18-591
  • Sub Project Id
  • Project Start Date
    9/15/2013 - 11 years ago
  • Project End Date
    8/31/2019 - 5 years ago
  • Program Officer Name
    KREPKIY, DMITRIY
  • Budget Start Date
    9/1/2017 - 7 years ago
  • Budget End Date
    8/31/2019 - 5 years ago
  • Fiscal Year
    2018
  • Support Year
    03
  • Suffix
    S1
  • Award Notice Date
    9/19/2018 - 6 years ago
Organizations

One-Step, POC Sample-to-Answer Process for RNA Analysis Outside the Laboratory

PROJECT SUMMARY 1 Lynntech has developed a process to readily identify specific genomic loci in RNA-based bacteriophage and 2 viruses. We have demonstrated direct amplification of specific loci within the dengue genome using convective 3 RT-PCR (cRT-PCR). This direct detection of dengue eliminates the need for an independent sample 4 preparation step in the diagnosis of dengue infection. In doing so, we transitioned our convective amplification 5 units to perform RNA reverse transcription (RT), as well as DNA amplification (PCR). The convective assay is 6 based on the principle that two different temperatures at the ends of a cylinder will result in a buoyancy-driven 7 steady circulatory flow between those ends. Thus, PCR reagents in the cylinder will flow through a temperature 8 gradient allowing the necessary steps for amplification: denaturation, annealing, and elongation. Convective 9 amplification is rather appealing in that it requires very little power. Because reagents circulate within a 10 temperature gradient, there is no need for temperature ramping and power is not needed to cool, and then 11 heat, the reaction. So, our convective system can be powered by batteries and, therefore, provides a portable 12 means to detect and identify dengue infection, at the point-of-care. 13 Development of Lynntech?s dengue diagnostic includes the design and construction a disposable cartridge and 14 base unit, which allow the amplification of the dengue loci in point-of-care (and often, low resource) settings. 15 Dried reagents for the cRT-PCR reaction are contained within the cartridge, providing adequate reagent 16 stability under ambient storage conditions. The base unit is battery-operated, which makes it a perfect 17 diagnostic for field-use. Amplification products from the cRT-PCR reaction are applied to a lateral flow strip, 18 which is embedded in the cartridge, for analysis. This entire process takes less than one hour. Finally, it is 19 worth noting that Lynntech will meet with the FDA to discuss future studies that are necessary for regulatory 20 approval of our dengue diagnostic. 21 This application for an Administrative Supplement is to purchase equipment that will allow Lynntech to 22 manufacture lateral flow strips, in-house. This should represent significant savings with respect to further 23 development, testing, and commercialization of our dengue diagnostic. In addition, bringing lateral flow 24 development in-house will reduce the current risks associated with sole sourcing the technology. In this 25 Administrative Supplement application, we are requesting monies for equipment, supplies, and training.

IC Name
NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES
  • Activity
    R44
  • Administering IC
    GM
  • Application Type
    3
  • Direct Cost Amount
  • Indirect Cost Amount
  • Total Cost
    142911
  • Sub Project Total Cost
  • ARRA Funded
    False
  • CFDA Code
    859
  • Ed Inst. Type
  • Funding ICs
    NIGMS:142911\
  • Funding Mechanism
    SBIR-STTR RPGs
  • Study Section
  • Study Section Name
  • Organization Name
    LYNNTECH, INC.
  • Organization Department
  • Organization DUNS
    184758308
  • Organization City
    COLLEGE STATION
  • Organization State
    TX
  • Organization Country
    UNITED STATES
  • Organization Zip Code
    778456023
  • Organization District
    UNITED STATES